Query 002674
Match_columns 894
No_of_seqs 572 out of 3394
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 04:49:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002674.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002674hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0153 GalK Galactokinase [Ca 100.0 2E-57 4.4E-62 487.9 24.4 283 483-867 9-292 (390)
2 PLN02865 galactokinase 100.0 1.3E-51 2.7E-56 463.3 26.8 297 482-868 14-320 (423)
3 PTZ00290 galactokinase; Provis 100.0 7.6E-51 1.6E-55 460.9 25.8 233 483-757 18-286 (468)
4 PLN02521 galactokinase 100.0 2.4E-49 5.1E-54 454.7 26.8 321 484-869 36-386 (497)
5 PRK05322 galactokinase; Provis 100.0 8.1E-47 1.8E-51 426.2 29.0 284 484-868 7-291 (387)
6 PRK05101 galactokinase; Provis 100.0 3.7E-44 8E-49 404.3 26.6 279 483-868 7-285 (382)
7 TIGR00131 gal_kin galactokinas 100.0 8.1E-44 1.8E-48 403.7 26.0 283 484-868 5-290 (386)
8 PRK00555 galactokinase; Provis 100.0 8E-44 1.7E-48 398.6 24.5 263 498-869 3-268 (363)
9 PRK03817 galactokinase; Provis 100.0 4.1E-35 8.9E-40 328.9 24.0 204 499-751 2-205 (351)
10 KOG0631 Galactokinase [Carbohy 100.0 6.4E-36 1.4E-40 326.3 16.7 330 485-868 28-379 (489)
11 PF13528 Glyco_trans_1_3: Glyc 100.0 5.4E-31 1.2E-35 292.2 27.6 312 16-346 1-317 (318)
12 TIGR00549 mevalon_kin mevalona 100.0 9.9E-28 2.1E-32 260.5 17.7 180 502-739 1-180 (273)
13 PHA03392 egt ecdysteroid UDP-g 99.9 8.2E-26 1.8E-30 263.9 32.4 371 16-416 21-489 (507)
14 PLN02677 mevalonate kinase 99.9 6E-27 1.3E-31 261.8 17.5 206 498-739 3-244 (387)
15 PRK12446 undecaprenyldiphospho 99.9 4.4E-25 9.5E-30 247.7 30.5 325 13-369 1-351 (352)
16 TIGR01220 Pmev_kin_Gr_pos phos 99.9 5.5E-26 1.2E-30 254.6 21.5 198 499-739 2-230 (358)
17 cd03784 GT1_Gtf_like This fami 99.9 3.6E-25 7.9E-30 253.7 26.3 325 16-349 1-372 (401)
18 PRK13412 fkp bifunctional fuco 99.9 1.1E-25 2.4E-30 271.1 18.3 200 496-739 608-840 (974)
19 KOG1511 Mevalonate kinase MVK/ 99.9 1.1E-25 2.3E-30 235.9 13.4 207 498-739 5-244 (397)
20 TIGR00661 MJ1255 conserved hyp 99.9 6.4E-24 1.4E-28 236.1 27.9 307 17-350 1-315 (321)
21 PF00201 UDPGT: UDP-glucoronos 99.9 8E-27 1.7E-31 275.2 2.4 197 194-416 246-465 (500)
22 COG0707 MurG UDP-N-acetylgluco 99.9 7.3E-23 1.6E-27 227.5 28.5 317 22-370 6-354 (357)
23 TIGR01426 MGT glycosyltransfer 99.9 8.4E-23 1.8E-27 233.5 27.4 336 24-371 3-390 (392)
24 PRK03926 mevalonate kinase; Pr 99.9 2.1E-23 4.6E-28 229.8 19.0 172 498-739 2-173 (302)
25 COG1819 Glycosyl transferases, 99.9 4.8E-23 1E-27 234.4 21.4 342 15-373 1-401 (406)
26 COG1577 ERG12 Mevalonate kinas 99.9 1.7E-23 3.8E-28 225.1 15.9 184 499-739 2-185 (307)
27 PLN02208 glycosyltransferase f 99.9 3.4E-21 7.4E-26 221.0 33.9 336 22-371 10-420 (442)
28 PLN00414 glycosyltransferase f 99.9 5.4E-20 1.2E-24 211.4 31.6 348 13-371 4-421 (446)
29 PLN02210 UDP-glucosyl transfer 99.9 1.6E-19 3.5E-24 208.5 30.4 329 22-371 14-432 (456)
30 PLN03007 UDP-glucosyltransfera 99.9 8.4E-20 1.8E-24 213.0 28.2 347 13-372 5-458 (482)
31 COG4671 Predicted glycosyl tra 99.9 1.7E-19 3.6E-24 190.8 27.5 337 14-373 8-391 (400)
32 PTZ00298 mevalonate kinase; Pr 99.9 9.2E-21 2E-25 210.6 18.3 186 498-739 11-199 (328)
33 PLN02764 glycosyltransferase f 99.9 6.9E-19 1.5E-23 201.2 32.7 346 16-371 6-426 (453)
34 COG2605 Predicted kinase relat 99.8 9.1E-21 2E-25 195.0 14.6 186 498-739 2-202 (333)
35 PLN02670 transferase, transfer 99.8 7.8E-19 1.7E-23 202.3 31.4 343 22-372 12-464 (472)
36 PLN02173 UDP-glucosyl transfer 99.8 1.4E-18 3E-23 199.3 32.5 330 22-372 11-426 (449)
37 PLN02448 UDP-glycosyltransfera 99.8 7.8E-19 1.7E-23 203.8 30.2 340 15-372 10-435 (459)
38 PLN02410 UDP-glucoronosyl/UDP- 99.8 2.7E-18 5.8E-23 197.7 32.0 333 22-372 13-428 (451)
39 PLN02992 coniferyl-alcohol glu 99.8 2.8E-18 6E-23 197.9 30.8 335 14-372 6-445 (481)
40 PLN02562 UDP-glycosyltransfera 99.8 8E-18 1.7E-22 194.2 31.2 329 14-371 7-427 (448)
41 PLN02863 UDP-glucoronosyl/UDP- 99.8 1.1E-17 2.4E-22 193.9 31.3 340 13-371 9-448 (477)
42 PLN03004 UDP-glycosyltransfera 99.8 1.7E-17 3.7E-22 190.4 31.6 165 194-371 235-438 (451)
43 PRK00726 murG undecaprenyldiph 99.8 1.5E-17 3.3E-22 187.6 29.7 324 16-371 2-355 (357)
44 PLN02554 UDP-glycosyltransfera 99.8 2.1E-17 4.6E-22 192.7 30.1 166 194-371 238-455 (481)
45 PLN02207 UDP-glycosyltransfera 99.8 6.6E-17 1.4E-21 186.2 32.0 334 22-372 9-443 (468)
46 PLN02555 limonoid glucosyltran 99.8 7.7E-17 1.7E-21 186.4 32.7 339 14-371 8-446 (480)
47 cd03785 GT1_MurG MurG is an N- 99.8 2.6E-17 5.6E-22 184.9 27.5 300 18-350 2-325 (350)
48 PLN00164 glucosyltransferase; 99.8 5.5E-17 1.2E-21 188.6 30.5 339 13-372 1-451 (480)
49 PLN02167 UDP-glycosyltransfera 99.8 1E-16 2.2E-21 186.7 29.9 151 194-349 243-434 (475)
50 PLN02152 indole-3-acetate beta 99.8 1.7E-16 3.6E-21 182.5 30.1 332 22-371 9-433 (455)
51 PLN02534 UDP-glycosyltransfera 99.8 3.2E-16 6.9E-21 181.6 31.2 337 22-371 14-463 (491)
52 PLN03015 UDP-glucosyl transfer 99.7 1.3E-15 2.7E-20 175.1 30.4 334 22-372 9-446 (470)
53 PRK13608 diacylglycerol glucos 99.7 2.4E-16 5.1E-21 180.2 24.3 243 108-372 94-370 (391)
54 PRK13609 diacylglycerol glucos 99.7 1.3E-16 2.8E-21 181.7 22.1 325 16-371 5-369 (380)
55 TIGR03590 PseG pseudaminic aci 99.7 2.3E-16 5E-21 171.6 22.5 249 23-320 10-279 (279)
56 PLN02605 monogalactosyldiacylg 99.7 2E-16 4.3E-21 180.3 22.7 157 209-370 192-378 (382)
57 TIGR01133 murG undecaprenyldip 99.7 2.5E-15 5.5E-20 168.6 29.5 300 17-350 2-322 (348)
58 PRK00128 ipk 4-diphosphocytidy 99.7 1.1E-16 2.3E-21 175.1 15.1 170 498-738 3-177 (286)
59 TIGR00154 ispE 4-diphosphocyti 99.7 1.5E-16 3.3E-21 173.7 15.6 172 498-739 2-180 (293)
60 KOG1192 UDP-glucuronosyl and U 99.7 3E-15 6.5E-20 176.6 26.6 184 191-388 242-463 (496)
61 PRK02534 4-diphosphocytidyl-2- 99.7 8.6E-16 1.9E-20 169.8 18.3 171 498-738 4-180 (312)
62 TIGR00215 lpxB lipid-A-disacch 99.7 1.7E-15 3.7E-20 172.5 20.2 296 22-350 11-348 (385)
63 PF10509 GalKase_gal_bdg: Gala 99.7 2.9E-17 6.3E-22 129.3 2.6 51 485-536 2-52 (52)
64 TIGR01219 Pmev_kin_ERG8 phosph 99.6 4.1E-14 9E-19 160.6 19.6 208 500-739 2-285 (454)
65 PF00288 GHMP_kinases_N: GHMP 99.5 4.6E-14 9.9E-19 119.1 8.2 67 633-701 1-67 (67)
66 PRK01123 shikimate kinase; Pro 99.5 7.6E-13 1.7E-17 144.2 18.7 122 611-739 57-179 (282)
67 PRK00025 lpxB lipid-A-disaccha 99.5 1.2E-12 2.6E-17 149.1 21.0 318 16-371 2-375 (380)
68 COG3980 spsG Spore coat polysa 99.5 1.9E-12 4.1E-17 134.0 17.8 263 23-350 11-294 (318)
69 TIGR01920 Shik_kin_archae shik 99.4 4.4E-12 9.6E-17 136.3 18.3 120 611-736 46-166 (261)
70 PF04101 Glyco_tran_28_C: Glyc 99.4 1.7E-13 3.7E-18 137.5 5.7 127 225-351 1-146 (167)
71 PRK14611 4-diphosphocytidyl-2- 99.4 6.1E-12 1.3E-16 136.6 16.4 115 609-739 60-174 (275)
72 PRK00343 ipk 4-diphosphocytidy 99.4 1.1E-11 2.5E-16 133.8 16.6 166 498-739 7-180 (271)
73 TIGR03492 conserved hypothetic 99.3 5.6E-11 1.2E-15 135.7 21.0 319 25-370 5-395 (396)
74 PLN02871 UDP-sulfoquinovose:DA 99.3 3.9E-10 8.5E-15 132.1 26.2 308 13-351 56-402 (465)
75 PLN02451 homoserine kinase 99.3 2.6E-11 5.5E-16 136.4 14.4 122 611-739 115-239 (370)
76 PRK14608 4-diphosphocytidyl-2- 99.2 4.1E-10 8.8E-15 123.1 18.3 116 609-739 69-184 (290)
77 cd03814 GT1_like_2 This family 99.2 1.6E-09 3.6E-14 120.7 23.4 289 27-350 14-333 (364)
78 cd04962 GT1_like_5 This family 99.2 2E-09 4.2E-14 121.6 23.6 297 17-350 2-337 (371)
79 COG0083 ThrB Homoserine kinase 99.2 5.8E-10 1.3E-14 119.6 17.5 119 612-744 60-186 (299)
80 TIGR00191 thrB homoserine kina 99.2 3.4E-10 7.3E-15 124.8 14.3 116 610-738 60-178 (302)
81 cd03816 GT1_ALG1_like This fam 99.1 1.2E-08 2.7E-13 117.7 25.5 119 221-349 229-381 (415)
82 PRK14616 4-diphosphocytidyl-2- 99.1 2.1E-09 4.5E-14 117.7 17.5 114 610-739 64-178 (287)
83 cd03825 GT1_wcfI_like This fam 99.1 1.1E-08 2.3E-13 114.9 22.8 134 209-350 177-331 (365)
84 PRK14614 4-diphosphocytidyl-2- 99.1 1.7E-09 3.8E-14 117.7 15.9 113 611-739 67-179 (280)
85 cd03817 GT1_UGDG_like This fam 99.1 3.1E-08 6.8E-13 110.4 26.0 296 24-351 11-345 (374)
86 TIGR03088 stp2 sugar transfera 99.1 1.9E-08 4.1E-13 114.2 23.6 294 16-350 2-339 (374)
87 PRK14609 4-diphosphocytidyl-2- 99.1 3.5E-09 7.6E-14 114.4 16.6 114 608-738 62-176 (269)
88 cd03808 GT1_cap1E_like This fa 99.1 4.3E-08 9.3E-13 108.3 25.8 121 222-350 186-330 (359)
89 cd03820 GT1_amsD_like This fam 99.1 3.9E-08 8.4E-13 108.1 25.2 286 18-350 2-320 (348)
90 PRK03188 4-diphosphocytidyl-2- 99.0 4.6E-09 1E-13 115.7 17.0 107 611-733 65-171 (300)
91 cd03812 GT1_CapH_like This fam 99.0 3.2E-08 6.9E-13 110.9 23.9 129 214-352 183-334 (358)
92 TIGR00144 beta_RFAP_syn beta-R 99.0 6.3E-09 1.4E-13 115.3 17.7 111 610-735 64-192 (324)
93 cd04951 GT1_WbdM_like This fam 99.0 4E-08 8.6E-13 110.0 24.5 129 211-350 176-327 (360)
94 cd03823 GT1_ExpE7_like This fa 99.0 2.5E-08 5.3E-13 110.9 22.6 121 222-350 189-330 (359)
95 cd03794 GT1_wbuB_like This fam 99.0 5.4E-08 1.2E-12 108.9 24.6 121 222-350 218-366 (394)
96 cd03807 GT1_WbnK_like This fam 99.0 7.6E-08 1.6E-12 106.7 25.6 292 18-350 2-333 (365)
97 PRK14612 4-diphosphocytidyl-2- 99.0 6.7E-09 1.5E-13 113.0 16.3 164 499-738 4-172 (276)
98 cd03819 GT1_WavL_like This fam 99.0 1E-07 2.3E-12 106.6 26.3 277 27-348 10-329 (355)
99 PRK15179 Vi polysaccharide bio 99.0 1.1E-07 2.4E-12 114.8 27.7 122 223-350 516-660 (694)
100 PRK10307 putative glycosyl tra 99.0 2.1E-07 4.6E-12 107.3 28.6 131 211-350 217-374 (412)
101 PRK01212 homoserine kinase; Pr 99.0 6.3E-09 1.4E-13 114.8 14.9 114 611-738 63-178 (301)
102 PRK14615 4-diphosphocytidyl-2- 99.0 1.5E-08 3.2E-13 111.2 17.1 171 497-739 6-183 (296)
103 COG1685 Archaeal shikimate kin 99.0 2.6E-08 5.6E-13 103.2 17.5 176 499-745 4-181 (278)
104 PF04007 DUF354: Protein of un 99.0 6.4E-07 1.4E-11 99.2 29.4 308 16-370 1-333 (335)
105 KOG0631 Galactokinase [Carbohy 98.9 1.4E-12 3.1E-17 144.0 -15.6 423 118-620 61-485 (489)
106 TIGR00236 wecB UDP-N-acetylglu 98.9 2.4E-07 5.2E-12 105.0 25.3 316 17-370 2-364 (365)
107 TIGR03449 mycothiol_MshA UDP-N 98.9 2.2E-07 4.7E-12 106.8 25.0 300 27-350 20-369 (405)
108 cd03800 GT1_Sucrose_synthase T 98.9 1.2E-07 2.5E-12 108.0 22.5 128 214-350 211-369 (398)
109 cd03796 GT1_PIG-A_like This fa 98.9 2.5E-07 5.3E-12 106.3 25.2 119 222-350 191-334 (398)
110 cd03811 GT1_WabH_like This fam 98.9 5.5E-07 1.2E-11 99.0 26.4 117 222-346 187-326 (353)
111 PTZ00299 homoserine kinase; Pr 98.9 2.7E-08 5.8E-13 110.3 15.7 115 610-734 61-180 (336)
112 cd03805 GT1_ALG2_like This fam 98.9 4.4E-07 9.5E-12 103.5 25.6 120 222-350 209-365 (392)
113 cd03801 GT1_YqgM_like This fam 98.9 3.4E-07 7.3E-12 101.1 23.8 293 26-350 13-342 (374)
114 cd03786 GT1_UDP-GlcNAc_2-Epime 98.8 4.9E-07 1.1E-11 102.1 24.7 127 214-351 190-339 (363)
115 cd03821 GT1_Bme6_like This fam 98.8 9.7E-07 2.1E-11 98.3 26.8 126 214-350 194-346 (375)
116 cd03792 GT1_Trehalose_phosphor 98.8 3.4E-07 7.5E-12 104.0 22.9 128 212-350 179-338 (372)
117 PRK05749 3-deoxy-D-manno-octul 98.8 5.1E-07 1.1E-11 104.6 24.1 81 264-350 304-389 (425)
118 PRK00650 4-diphosphocytidyl-2- 98.8 9.3E-08 2E-12 103.3 16.2 113 610-738 61-173 (288)
119 cd03799 GT1_amsK_like This is 98.8 9.4E-07 2E-11 98.7 25.1 121 222-350 177-328 (355)
120 cd03802 GT1_AviGT4_like This f 98.8 5.9E-07 1.3E-11 99.6 22.7 274 16-348 1-307 (335)
121 PRK09922 UDP-D-galactose:(gluc 98.8 2.5E-07 5.4E-12 104.7 19.9 122 224-353 180-328 (359)
122 cd03818 GT1_ExpC_like This fam 98.8 1.1E-06 2.4E-11 100.7 23.9 82 261-350 280-367 (396)
123 cd03798 GT1_wlbH_like This fam 98.7 2.3E-06 5.1E-11 94.8 25.4 122 222-351 200-346 (377)
124 cd05844 GT1_like_7 Glycosyltra 98.7 6.5E-07 1.4E-11 100.9 20.9 119 224-350 188-337 (367)
125 PLN02275 transferase, transfer 98.7 2.2E-06 4.8E-11 97.5 25.2 92 246-347 260-371 (371)
126 PRK00654 glgA glycogen synthas 98.7 2.1E-06 4.6E-11 100.7 24.4 138 210-349 268-428 (466)
127 TIGR01240 mevDPdecarb diphosph 98.7 1.6E-07 3.5E-12 102.9 13.5 81 610-702 66-146 (305)
128 cd03795 GT1_like_4 This family 98.7 3.5E-06 7.7E-11 94.1 24.6 119 223-350 190-333 (357)
129 cd03822 GT1_ecORF704_like This 98.7 2.4E-06 5.1E-11 95.4 23.0 119 223-350 184-335 (366)
130 PLN02846 digalactosyldiacylgly 98.6 1E-05 2.2E-10 93.5 26.6 114 225-350 229-364 (462)
131 TIGR02095 glgA glycogen/starch 98.6 4.3E-06 9.3E-11 98.4 24.3 131 210-348 276-436 (473)
132 PRK15427 colanic acid biosynth 98.6 2.6E-06 5.6E-11 98.1 21.2 121 222-350 220-372 (406)
133 TIGR02472 sucr_P_syn_N sucrose 98.6 7.1E-06 1.5E-10 95.5 25.0 83 260-350 315-407 (439)
134 PRK14610 4-diphosphocytidyl-2- 98.6 9.3E-07 2E-11 96.4 15.8 115 610-743 65-181 (283)
135 PRK15490 Vi polysaccharide bio 98.6 7.8E-06 1.7E-10 95.2 23.8 297 18-334 164-525 (578)
136 PRK10125 putative glycosyl tra 98.6 6E-06 1.3E-10 95.0 22.2 90 238-334 260-358 (405)
137 TIGR02470 sucr_synth sucrose s 98.5 5.3E-05 1.2E-09 92.1 29.5 125 214-347 539-707 (784)
138 PRK04181 4-diphosphocytidyl-2- 98.5 1.7E-06 3.7E-11 92.7 14.7 114 610-738 61-179 (257)
139 PRK15484 lipopolysaccharide 1, 98.5 1.5E-05 3.3E-10 90.9 23.4 131 211-350 181-345 (380)
140 TIGR02149 glgA_Coryne glycogen 98.5 1.7E-05 3.7E-10 90.3 23.2 135 209-350 187-353 (388)
141 PRK14089 ipid-A-disaccharide s 98.4 2.1E-06 4.5E-11 95.9 13.6 118 223-345 167-315 (347)
142 PLN02316 synthase/transferase 98.4 9.1E-05 2E-09 92.3 28.9 137 211-349 827-998 (1036)
143 PRK14099 glycogen synthase; Pr 98.4 3E-05 6.4E-10 91.3 23.6 133 211-345 281-440 (485)
144 PF02684 LpxB: Lipid-A-disacch 98.4 1.2E-05 2.7E-10 90.3 19.3 292 21-350 3-341 (373)
145 cd04955 GT1_like_6 This family 98.4 5.4E-05 1.2E-09 84.8 24.4 125 212-350 183-331 (363)
146 KOG3349 Predicted glycosyltran 98.4 4.7E-06 1E-10 79.0 12.6 111 224-334 4-137 (170)
147 PLN02939 transferase, transfer 98.3 0.00028 6E-09 86.7 29.5 137 210-348 763-930 (977)
148 TIGR02468 sucrsPsyn_pln sucros 98.3 5.8E-05 1.3E-09 93.7 23.9 83 260-350 546-638 (1050)
149 PLN02501 digalactosyldiacylgly 98.3 1.6E-05 3.4E-10 93.8 17.8 222 108-351 424-683 (794)
150 cd03791 GT1_Glycogen_synthase_ 98.3 3.9E-05 8.4E-10 90.2 21.7 138 211-350 282-443 (476)
151 cd01635 Glycosyltransferase_GT 98.3 1.6E-05 3.4E-10 82.2 16.2 52 261-312 160-218 (229)
152 KOG4644 L-fucose kinase [Carbo 98.3 6.4E-06 1.4E-10 91.0 13.3 103 630-736 690-806 (948)
153 cd03809 GT1_mtfB_like This fam 98.3 2.8E-05 6E-10 86.7 18.9 117 224-350 195-337 (365)
154 TIGR03087 stp1 sugar transfera 98.3 2.8E-05 6E-10 89.3 19.2 116 225-350 225-363 (397)
155 COG0763 LpxB Lipid A disacchar 98.3 9.5E-05 2.1E-09 81.6 21.5 290 21-350 6-345 (381)
156 TIGR03568 NeuC_NnaA UDP-N-acet 98.3 0.00019 4.1E-09 81.4 24.8 213 107-348 82-338 (365)
157 cd03804 GT1_wbaZ_like This fam 98.2 6E-05 1.3E-09 84.7 19.9 117 226-350 197-327 (351)
158 PRK01021 lpxB lipid-A-disaccha 98.2 7.3E-05 1.6E-09 87.7 20.5 198 106-322 298-529 (608)
159 PRK14098 glycogen synthase; Pr 98.2 0.00034 7.3E-09 82.6 25.4 135 210-348 292-450 (489)
160 PRK05905 hypothetical protein; 98.2 2.9E-05 6.3E-10 83.0 14.7 111 610-738 66-178 (258)
161 COG1947 IspE 4-diphosphocytidy 98.2 6.4E-05 1.4E-09 80.7 16.7 112 611-738 67-178 (289)
162 PRK14613 4-diphosphocytidyl-2- 98.2 1.8E-05 3.9E-10 86.9 13.0 110 610-738 74-184 (297)
163 PLN00142 sucrose synthase 98.1 0.00043 9.3E-09 84.5 23.2 125 214-347 562-730 (815)
164 PLN02407 diphosphomevalonate d 98.0 5.1E-05 1.1E-09 83.2 13.1 61 632-702 104-167 (343)
165 cd03806 GT1_ALG11_like This fa 98.0 0.0022 4.7E-08 74.3 26.2 119 223-350 236-393 (419)
166 cd03813 GT1_like_3 This family 98.0 0.00029 6.4E-09 82.9 19.1 119 223-350 292-443 (475)
167 PF02350 Epimerase_2: UDP-N-ac 97.9 2.5E-05 5.4E-10 87.9 9.1 136 221-367 178-345 (346)
168 cd04950 GT1_like_1 Glycosyltra 97.9 0.00059 1.3E-08 77.7 20.6 115 224-350 205-341 (373)
169 COG4542 PduX Protein involved 97.9 4.6E-05 9.9E-10 78.4 9.1 109 621-745 71-181 (293)
170 PF03033 Glyco_transf_28: Glyc 97.9 6.9E-06 1.5E-10 79.4 2.9 112 23-147 5-130 (139)
171 PF00534 Glycos_transf_1: Glyc 97.7 0.00014 3E-09 72.7 9.4 132 210-350 2-159 (172)
172 COG3890 ERG8 Phosphomevalonate 97.7 8.1E-05 1.8E-09 77.3 7.3 92 643-739 107-207 (337)
173 COG1817 Uncharacterized protei 97.7 0.0055 1.2E-07 65.6 20.5 301 27-372 10-341 (346)
174 cd04949 GT1_gtfA_like This fam 97.7 0.00065 1.4E-08 76.9 14.9 121 223-350 203-346 (372)
175 COG0381 WecB UDP-N-acetylgluco 97.5 0.027 5.8E-07 62.8 24.6 101 262-372 262-373 (383)
176 COG1829 Predicted archaeal kin 97.4 0.0027 5.8E-08 66.8 14.1 93 631-733 74-170 (283)
177 COG3407 MVD1 Mevalonate pyroph 97.4 0.00069 1.5E-08 73.9 9.7 81 610-702 71-151 (329)
178 PLN02949 transferase, transfer 97.2 0.051 1.1E-06 63.7 23.1 117 225-350 269-423 (463)
179 TIGR02918 accessory Sec system 97.0 0.0032 6.9E-08 74.4 10.4 121 222-348 317-466 (500)
180 COG1519 KdtA 3-deoxy-D-manno-o 96.9 0.083 1.8E-06 59.5 20.1 73 272-350 310-387 (419)
181 COG5017 Uncharacterized conser 96.8 0.0086 1.9E-07 56.3 9.6 108 226-334 2-126 (161)
182 PHA01633 putative glycosyl tra 96.7 0.0069 1.5E-07 67.5 9.8 138 211-350 135-308 (335)
183 PF13692 Glyco_trans_1_4: Glyc 96.7 0.0025 5.4E-08 60.9 5.5 115 225-349 3-135 (135)
184 KOG2833 Mevalonate pyrophospha 96.7 0.0059 1.3E-07 64.9 8.3 62 631-702 105-166 (395)
185 PF06258 Mito_fiss_Elm1: Mitoc 96.6 0.6 1.3E-05 51.7 23.9 97 262-371 209-309 (311)
186 cd04946 GT1_AmsK_like This fam 96.4 0.016 3.4E-07 66.9 10.4 122 222-350 228-378 (407)
187 COG1907 Predicted archaeal sug 96.3 0.016 3.5E-07 61.4 9.2 96 630-736 70-174 (312)
188 KOG4519 Phosphomevalonate kina 96.0 0.12 2.6E-06 55.6 13.4 60 643-702 152-224 (459)
189 PHA01630 putative group 1 glyc 95.0 0.16 3.4E-06 57.0 11.0 90 223-312 141-246 (331)
190 KOG1111 N-acetylglucosaminyltr 94.8 0.7 1.5E-05 50.9 14.7 67 246-312 225-308 (426)
191 PRK09814 beta-1,6-galactofuran 93.8 0.38 8.1E-06 53.9 10.7 109 225-346 170-297 (333)
192 PF13579 Glyco_trans_4_4: Glyc 93.6 0.28 6.2E-06 47.2 8.3 97 28-145 2-103 (160)
193 PF13477 Glyco_trans_4_2: Glyc 93.6 0.92 2E-05 43.3 11.8 99 18-144 2-105 (139)
194 PRK10916 ADP-heptose:LPS hepto 93.4 5.7 0.00012 44.7 19.4 93 213-306 170-287 (348)
195 PF08660 Alg14: Oligosaccharid 92.5 1.1 2.4E-05 45.1 10.6 40 109-148 83-131 (170)
196 COG2099 CobK Precorrin-6x redu 92.4 3.8 8.2E-05 43.4 14.6 88 28-148 9-103 (257)
197 KOG1537 Homoserine kinase [Ami 91.9 0.13 2.8E-06 53.7 3.1 54 630-683 93-146 (355)
198 COG0859 RfaF ADP-heptose:LPS h 91.6 18 0.0004 40.4 20.4 83 223-306 175-277 (334)
199 TIGR00715 precor6x_red precorr 91.6 22 0.00049 38.2 20.4 49 261-309 174-233 (256)
200 PF13439 Glyco_transf_4: Glyco 90.8 2.3 5E-05 41.6 11.0 28 27-54 12-39 (177)
201 PRK10422 lipopolysaccharide co 90.0 38 0.00081 38.1 21.9 84 222-306 182-288 (352)
202 COG3660 Predicted nucleoside-d 89.6 2.7 5.9E-05 44.5 10.3 85 274-371 239-326 (329)
203 PF02571 CbiJ: Precorrin-6x re 89.2 35 0.00076 36.6 20.2 151 110-310 58-230 (249)
204 TIGR02400 trehalose_OtsA alpha 87.2 0.94 2E-05 53.1 5.9 68 272-350 348-423 (456)
205 PF01975 SurE: Survival protei 87.0 2.9 6.3E-05 43.1 8.7 37 16-54 1-37 (196)
206 TIGR02201 heptsyl_trn_III lipo 86.1 49 0.0011 37.0 18.9 84 222-306 180-286 (344)
207 PF07429 Glyco_transf_56: 4-al 84.6 7.9 0.00017 43.0 10.9 81 262-350 245-334 (360)
208 PF13844 Glyco_transf_41: Glyc 84.5 1.5 3.2E-05 51.1 5.6 114 213-329 275-413 (468)
209 PRK02797 4-alpha-L-fucosyltran 84.2 8.7 0.00019 42.1 10.9 79 262-348 206-293 (322)
210 COG3914 Spy Predicted O-linked 82.9 5.4 0.00012 46.9 9.1 111 214-330 421-561 (620)
211 PRK08057 cobalt-precorrin-6x r 82.1 77 0.0017 34.0 21.7 37 110-146 57-100 (248)
212 cd03788 GT1_TPS Trehalose-6-Ph 82.0 1.1 2.3E-05 52.7 3.3 69 271-350 352-428 (460)
213 COG4370 Uncharacterized protei 81.6 2.7 5.8E-05 45.4 5.6 76 272-352 304-382 (412)
214 COG0297 GlgA Glycogen synthase 81.1 8 0.00017 45.5 10.0 137 210-349 279-442 (487)
215 TIGR02195 heptsyl_trn_II lipop 80.9 9.9 0.00021 42.4 10.5 93 213-306 164-277 (334)
216 cd00550 ArsA_ATPase Oxyanion-t 76.0 21 0.00045 38.4 10.7 38 18-55 2-39 (254)
217 PF07355 GRDB: Glycine/sarcosi 75.5 18 0.00039 40.2 9.9 37 108-144 70-117 (349)
218 TIGR02193 heptsyl_trn_I lipopo 75.1 14 0.00031 40.8 9.5 89 217-306 173-280 (319)
219 PF05159 Capsule_synth: Capsul 75.0 6.1 0.00013 42.7 6.3 47 262-309 182-228 (269)
220 COG0003 ArsA Predicted ATPase 73.7 25 0.00055 39.1 10.7 40 16-55 2-41 (322)
221 PF02374 ArsA_ATPase: Anion-tr 73.4 21 0.00046 39.5 10.1 40 16-55 1-40 (305)
222 COG0438 RfaG Glycosyltransfera 72.7 8.9 0.00019 41.1 7.0 118 225-350 200-343 (381)
223 PLN03063 alpha,alpha-trehalose 71.3 6.5 0.00014 49.4 6.1 68 273-350 369-444 (797)
224 TIGR03713 acc_sec_asp1 accesso 70.7 3.2 7E-05 49.4 3.1 76 262-350 409-489 (519)
225 PF06925 MGDG_synth: Monogalac 70.1 7.8 0.00017 38.7 5.3 40 108-147 79-126 (169)
226 cd03793 GT1_Glycogen_synthase_ 69.9 11 0.00023 45.2 7.0 38 275-312 470-511 (590)
227 COG0496 SurE Predicted acid ph 67.7 35 0.00075 36.5 9.6 26 28-54 11-36 (252)
228 KOG0853 Glycosyltransferase [C 66.9 3.4 7.3E-05 48.2 2.1 83 275-363 361-448 (495)
229 KOG2941 Beta-1,4-mannosyltrans 66.4 2.2E+02 0.0049 31.9 24.7 118 221-349 252-405 (444)
230 PF01075 Glyco_transf_9: Glyco 63.1 23 0.0005 37.4 7.6 85 221-306 103-209 (247)
231 PF04413 Glycos_transf_N: 3-De 62.8 14 0.00031 37.7 5.6 92 22-144 26-124 (186)
232 PRK08248 O-acetylhomoserine am 62.6 1.1 2.4E-05 52.1 -2.9 44 404-452 378-423 (431)
233 PRK13932 stationary phase surv 62.3 90 0.0019 33.6 11.7 38 14-54 4-41 (257)
234 PLN02509 cystathionine beta-ly 60.9 1.3 2.8E-05 52.0 -2.8 45 403-452 411-457 (464)
235 cd03789 GT1_LPS_heptosyltransf 60.7 32 0.0007 37.2 8.3 36 18-54 2-39 (279)
236 TIGR01326 OAH_OAS_sulfhy OAH/O 60.2 1.4 3E-05 51.1 -2.7 47 401-452 367-415 (418)
237 PF04464 Glyphos_transf: CDP-G 59.7 11 0.00023 42.8 4.5 97 210-307 179-296 (369)
238 PRK07049 methionine gamma-lyas 59.1 1.5 3.3E-05 51.0 -2.6 47 401-452 374-422 (427)
239 PRK06176 cystathionine gamma-s 57.9 1.4 3.1E-05 50.3 -3.0 43 405-452 330-374 (380)
240 KOG0053 Cystathionine beta-lya 56.8 2.5 5.4E-05 47.9 -1.2 47 400-452 354-402 (409)
241 PRK10017 colanic acid biosynth 55.8 35 0.00075 39.7 7.8 71 275-351 323-394 (426)
242 PRK07504 O-succinylhomoserine 55.7 1.7 3.6E-05 50.1 -2.9 44 404-452 346-391 (398)
243 PRK08249 cystathionine gamma-s 55.2 1.9 4.1E-05 49.6 -2.6 45 404-453 344-390 (398)
244 PF13524 Glyco_trans_1_2: Glyc 55.2 38 0.00082 29.6 6.4 52 289-350 12-63 (92)
245 PRK07812 O-acetylhomoserine am 54.5 4.9 0.00011 46.9 0.6 44 405-453 383-428 (436)
246 PRK06434 cystathionine gamma-l 54.0 1.8 3.8E-05 49.6 -3.1 43 405-452 336-380 (384)
247 COG0052 RpsB Ribosomal protein 53.7 78 0.0017 33.6 9.1 28 119-146 157-187 (252)
248 PRK08045 cystathionine gamma-s 52.7 2.2 4.7E-05 49.0 -2.7 43 405-452 334-378 (386)
249 PRK06767 methionine gamma-lyas 51.9 2.7 5.8E-05 48.2 -2.1 43 405-452 337-381 (386)
250 PRK08133 O-succinylhomoserine 51.0 2.5 5.4E-05 48.5 -2.6 45 403-452 340-386 (390)
251 PRK07671 cystathionine beta-ly 50.5 2.4 5.3E-05 48.4 -2.7 45 403-452 328-374 (377)
252 PRK05613 O-acetylhomoserine am 50.2 2.5 5.3E-05 49.3 -2.7 31 421-452 400-432 (437)
253 PF12000 Glyco_trans_4_3: Gkyc 49.9 1.6E+02 0.0034 29.7 10.4 31 116-146 64-96 (171)
254 PRK06084 O-acetylhomoserine am 49.7 2.5 5.4E-05 49.1 -2.8 43 405-452 374-418 (425)
255 PRK10964 ADP-heptose:LPS hepto 49.6 50 0.0011 36.6 7.7 64 242-306 205-279 (322)
256 PRK08861 cystathionine gamma-s 49.6 2.5 5.4E-05 48.5 -2.8 32 421-453 347-380 (388)
257 PRK08134 O-acetylhomoserine am 48.7 2.4 5.2E-05 49.3 -3.1 44 405-453 379-424 (433)
258 PRK06460 hypothetical protein; 48.5 2.5 5.4E-05 48.3 -3.0 43 405-452 326-370 (376)
259 PRK05994 O-acetylhomoserine am 47.4 2.8 6.2E-05 48.7 -2.8 25 428-452 396-422 (427)
260 PF00551 Formyl_trans_N: Formy 47.1 65 0.0014 32.6 7.4 35 16-54 1-38 (181)
261 TIGR02919 accessory Sec system 46.6 39 0.00084 39.5 6.3 94 246-350 305-412 (438)
262 PRK05939 hypothetical protein; 46.0 3.6 7.7E-05 47.4 -2.3 43 405-452 348-392 (397)
263 TIGR01329 cysta_beta_ly_E cyst 45.9 3.2 7E-05 47.4 -2.6 43 405-452 327-371 (378)
264 cd02037 MRP-like MRP (Multiple 45.3 1.1E+02 0.0023 30.4 8.6 37 18-54 2-38 (169)
265 TIGR01328 met_gam_lyase methio 45.0 4.1 8.8E-05 46.8 -2.0 31 421-452 354-386 (391)
266 KOG1537 Homoserine kinase [Ami 44.7 25 0.00055 37.3 3.9 99 639-744 130-237 (355)
267 PRK12311 rpsB 30S ribosomal pr 44.4 1.1E+02 0.0024 34.1 9.1 29 118-146 152-183 (326)
268 TIGR02080 O_succ_thio_ly O-suc 43.2 3.7 8E-05 47.0 -2.7 43 405-452 333-377 (382)
269 PRK08776 cystathionine gamma-s 43.0 3.2 7E-05 47.9 -3.2 44 405-453 342-387 (405)
270 PRK06234 methionine gamma-lyas 42.2 4.3 9.4E-05 46.7 -2.4 44 405-453 349-394 (400)
271 PRK07503 methionine gamma-lyas 42.2 4.8 0.0001 46.4 -2.0 32 421-453 360-393 (403)
272 PF01053 Cys_Met_Meta_PP: Cys/ 41.5 2.1 4.5E-05 49.0 -5.1 43 405-452 339-383 (386)
273 COG0626 MetC Cystathionine bet 41.4 4.9 0.00011 45.9 -2.0 45 403-452 344-390 (396)
274 PRK06702 O-acetylhomoserine am 41.0 4.4 9.5E-05 47.1 -2.6 30 422-452 389-420 (432)
275 cd01425 RPS2 Ribosomal protein 40.3 1.6E+02 0.0034 30.2 9.0 110 27-146 39-158 (193)
276 COG1797 CobB Cobyrinic acid a, 40.0 57 0.0012 37.5 6.1 38 18-55 3-40 (451)
277 KOG2825 Putative arsenite-tran 39.7 80 0.0017 33.7 6.6 42 15-56 18-59 (323)
278 TIGR01325 O_suc_HS_sulf O-succ 37.9 4.5 9.8E-05 46.2 -3.1 31 421-452 346-378 (380)
279 PRK08574 cystathionine gamma-s 37.9 4.7 0.0001 46.2 -2.9 43 405-452 336-380 (385)
280 PF03641 Lysine_decarbox: Poss 37.7 67 0.0014 30.8 5.5 50 276-325 50-111 (133)
281 PRK01077 cobyrinic acid a,c-di 37.6 2E+02 0.0044 33.6 10.6 40 13-54 3-42 (451)
282 TIGR00730 conserved hypothetic 36.6 66 0.0014 32.6 5.4 50 276-325 93-153 (178)
283 PRK00346 surE 5'(3')-nucleotid 35.5 3E+02 0.0064 29.6 10.4 35 17-54 2-36 (250)
284 TIGR02398 gluc_glyc_Psyn gluco 35.5 61 0.0013 38.4 5.7 66 274-350 376-449 (487)
285 TIGR00087 surE 5'/3'-nucleotid 35.0 3.9E+02 0.0084 28.6 11.2 25 29-54 12-36 (244)
286 PRK14501 putative bifunctional 34.7 27 0.00058 43.7 2.7 68 272-350 354-429 (726)
287 PF02441 Flavoprotein: Flavopr 33.4 51 0.0011 31.3 3.9 36 16-53 1-36 (129)
288 KOG0780 Signal recognition par 32.9 36 0.00079 38.4 3.0 35 20-54 105-139 (483)
289 PRK07810 O-succinylhomoserine 31.8 6.9 0.00015 45.1 -2.9 25 428-452 374-400 (403)
290 PRK13935 stationary phase surv 31.0 4.5E+02 0.0098 28.3 10.9 25 29-54 12-36 (253)
291 PF05728 UPF0227: Uncharacteri 30.9 3.5E+02 0.0077 27.6 9.7 80 20-144 3-87 (187)
292 TIGR00725 conserved hypothetic 29.9 77 0.0017 31.5 4.6 38 275-312 86-128 (159)
293 PRK05986 cob(I)alamin adenolsy 29.7 3.5E+02 0.0076 27.8 9.3 30 22-51 28-57 (191)
294 PRK08305 spoVFB dipicolinate s 28.9 82 0.0018 32.5 4.7 37 15-53 5-42 (196)
295 PRK00994 F420-dependent methyl 28.8 68 0.0015 33.7 3.9 37 111-147 53-96 (277)
296 PRK07269 cystathionine gamma-s 28.7 8.3 0.00018 43.8 -2.9 30 422-452 329-360 (364)
297 PRK04885 ppnK inorganic polyph 28.4 1.3E+02 0.0027 32.7 6.3 53 279-349 35-93 (265)
298 PLN02242 methionine gamma-lyas 27.8 8.4 0.00018 44.7 -3.1 44 405-453 366-412 (418)
299 PRK08247 cystathionine gamma-s 27.7 8.5 0.00019 43.7 -3.0 31 421-452 328-360 (366)
300 COG2327 WcaK Polysaccharide py 27.6 1.7E+02 0.0038 33.3 7.3 70 275-350 281-351 (385)
301 PRK08114 cystathionine beta-ly 27.0 12 0.00026 43.0 -2.0 25 428-452 363-389 (395)
302 PF15024 Glyco_transf_18: Glyc 26.9 1.6E+02 0.0034 35.2 7.0 111 260-372 320-454 (559)
303 PRK05299 rpsB 30S ribosomal pr 26.4 3.3E+02 0.0072 29.4 9.0 29 118-146 157-188 (258)
304 cd03109 DTBS Dethiobiotin synt 26.3 94 0.002 29.7 4.4 36 19-54 2-37 (134)
305 PRK04539 ppnK inorganic polyph 26.2 1.5E+02 0.0031 32.8 6.3 54 278-349 67-124 (296)
306 cd01974 Nitrogenase_MoFe_beta 25.8 4E+02 0.0087 31.0 10.3 35 109-145 368-402 (435)
307 cd02032 Bchl_like This family 25.5 93 0.002 33.4 4.7 38 16-54 1-38 (267)
308 PRK10037 cell division protein 24.9 1.1E+02 0.0025 32.4 5.2 38 17-54 3-40 (250)
309 PRK02649 ppnK inorganic polyph 24.8 1.2E+02 0.0027 33.5 5.5 55 278-350 67-125 (305)
310 PRK07811 cystathionine gamma-s 24.6 15 0.00033 42.1 -1.7 25 428-452 358-384 (388)
311 PRK03372 ppnK inorganic polyph 24.4 1.5E+02 0.0034 32.7 6.2 54 278-349 71-128 (306)
312 PF12146 Hydrolase_4: Putative 24.4 1.2E+02 0.0027 26.1 4.4 30 20-50 20-49 (79)
313 cd00614 CGS_like CGS_like: Cys 24.2 11 0.00023 43.0 -3.1 25 428-452 340-366 (369)
314 PRK13234 nifH nitrogenase redu 24.2 1.3E+02 0.0029 32.9 5.7 32 23-54 11-42 (295)
315 PRK09028 cystathionine beta-ly 23.7 15 0.00033 42.1 -1.9 26 428-453 357-384 (394)
316 COG1703 ArgK Putative periplas 23.7 3.4E+02 0.0073 30.0 8.2 33 22-54 57-89 (323)
317 PF00448 SRP54: SRP54-type pro 23.5 5.7E+02 0.012 26.2 9.8 34 21-54 6-39 (196)
318 PF07015 VirC1: VirC1 protein; 23.5 1.5E+02 0.0032 31.5 5.4 44 17-60 3-46 (231)
319 PRK07308 flavodoxin; Validated 23.0 1.5E+02 0.0033 28.6 5.2 36 13-51 1-37 (146)
320 PF01993 MTD: methylene-5,6,7, 23.0 1.1E+02 0.0024 32.3 4.2 37 111-147 52-95 (276)
321 PRK12446 undecaprenyldiphospho 22.7 3.8E+02 0.0082 30.2 9.1 27 280-306 92-121 (352)
322 PF06722 DUF1205: Protein of u 22.7 1.2E+02 0.0026 27.4 4.1 50 216-265 33-97 (97)
323 TIGR00379 cobB cobyrinic acid 22.4 4.6E+02 0.01 30.7 10.0 35 20-54 4-38 (449)
324 CHL00067 rps2 ribosomal protei 22.4 4.5E+02 0.0098 27.8 9.0 30 117-146 160-192 (230)
325 KOG4180 Predicted kinase [Gene 22.3 95 0.0021 34.2 3.7 32 277-308 103-138 (395)
326 PRK02155 ppnK NAD(+)/NADH kina 22.0 1.6E+02 0.0034 32.4 5.6 54 278-349 62-119 (291)
327 TIGR01917 gly_red_sel_B glycin 21.8 1.7E+02 0.0038 33.6 5.9 39 106-144 64-113 (431)
328 COG4088 Predicted nucleotide k 21.6 83 0.0018 32.8 3.0 32 21-52 6-37 (261)
329 TIGR01918 various_sel_PB selen 21.6 1.8E+02 0.0038 33.6 5.9 38 107-144 65-113 (431)
330 PRK01911 ppnK inorganic polyph 21.6 1.7E+02 0.0038 32.1 5.8 55 278-350 63-121 (292)
331 TIGR00682 lpxK tetraacyldisacc 21.4 3.2E+02 0.0068 30.4 7.9 32 23-54 37-68 (311)
332 PF06564 YhjQ: YhjQ protein; 21.3 1.5E+02 0.0033 31.6 5.2 40 13-54 1-40 (243)
333 cd00561 CobA_CobO_BtuR ATP:cor 20.9 8.3E+02 0.018 24.2 10.6 29 23-51 9-37 (159)
334 TIGR00162 conserved hypothetic 20.8 3.8E+02 0.0083 27.3 7.8 61 614-684 99-161 (188)
335 PRK05920 aromatic acid decarbo 20.8 1.4E+02 0.0029 31.1 4.5 36 17-54 5-40 (204)
336 PRK05632 phosphate acetyltrans 20.6 1E+03 0.023 29.5 13.0 35 18-52 5-39 (684)
337 COG1553 DsrE Uncharacterized c 20.5 1.7E+02 0.0037 27.7 4.6 34 17-50 2-38 (126)
338 TIGR01012 Sa_S2_E_A ribosomal 20.3 1.2E+02 0.0026 31.2 4.0 30 117-146 107-139 (196)
339 TIGR00708 cobA cob(I)alamin ad 20.3 6.1E+02 0.013 25.6 8.9 30 21-50 10-39 (173)
340 PF05014 Nuc_deoxyrib_tr: Nucl 20.1 1.4E+02 0.0031 27.4 4.1 34 275-308 57-98 (113)
341 PF01656 CbiA: CobQ/CobB/MinD/ 20.1 1.6E+02 0.0035 29.3 5.0 37 18-54 1-37 (195)
No 1
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-57 Score=487.85 Aligned_cols=283 Identities=31% Similarity=0.499 Sum_probs=238.2
Q ss_pred HHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeE
Q 002674 483 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVL 562 (894)
Q Consensus 483 ~~~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i 562 (894)
-..-++..|+..++.++++|||||||||||||||||+||||||+.+|++++++++|.++++++
T Consensus 9 ~~~~f~~~f~~~~~~~~~~aPGRvNLIGEHtDYn~G~VlP~Ain~~t~v~v~~r~d~~v~l~s----------------- 71 (390)
T COG0153 9 LQALFAEHFGYVEPTVTAFAPGRVNLIGEHTDYNGGFVLPCAINYGTYVAVAKRDDGKVRLYS----------------- 71 (390)
T ss_pred HHHHHHHHhcccCcceEecCCceEEeeccceeccCceEEEEEeecceEEEEEEccCceEEEEe-----------------
Confidence 334566777755677899999999999999999999999999999999999999998776653
Q ss_pred EEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCC
Q 002674 563 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPE 642 (894)
Q Consensus 563 ~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~ 642 (894)
.+ +.+....+..+ .+ +. ..+..+|+||++|+++.+ +..|+.+ .|++++|.|+||.
T Consensus 72 ----~n--~~~~~~~~~~~-~d-------~~---------~~~~~~W~nYvkgvi~~l-~~~g~~~-~G~~i~i~gnIP~ 126 (390)
T COG0153 72 ----AN--FGNAGDIFFLL-LD-------IA---------KEKIDDWANYVKGVIKAL-QKRGYAF-TGLDIVISGNIPI 126 (390)
T ss_pred ----CC--Cccccceeecc-hh-------hc---------ccccchhhhhHHHHHHHH-HhcCCCc-CCeeEEEecCCCC
Confidence 31 22211112111 11 11 123479999999998875 5788888 5999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecC
Q 002674 643 GKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP 722 (894)
Q Consensus 643 g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p 722 (894)
|+|||||||++||++.++..+++.++++.+++++|+.+||+|+|++||+|||++++||+++|++++||+++++ +++|+|
T Consensus 127 GaGLSSSAAleva~~~al~~l~~~~~~k~~la~i~q~AEn~fvGvn~G~mDQ~~s~~G~~~~al~ld~~~l~~-~~~~~p 205 (390)
T COG0153 127 GAGLSSSAALEVAVALALQRLFNLPLDKAELAKIAQVAENQFVGVNCGIMDQLASAFGKKDHALLLDCRTLEY-EPVPFP 205 (390)
T ss_pred CCCcCchHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhccCCcCchHHHHHHHhCCCCcEEEEEcccCce-EEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred CC-eEEEEEeCCCCcccCCCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhhhchhhhhcCC
Q 002674 723 SH-IRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 801 (894)
Q Consensus 723 ~~-~~~vv~~sgv~~~~~~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 801 (894)
.+ +.|||+||+++|.+++++||.||++| |+|++.|+. .++.|+|++
T Consensus 206 ~~~~~ivI~ns~vkr~la~seYn~Rr~ec-------------------------------e~A~~~l~~--~~~~L~d~~ 252 (390)
T COG0153 206 VGGVSIVIVNSNVKRELADSEYNERRAEC-------------------------------EEAAEFLGV--SIKSLRDVT 252 (390)
T ss_pred ccceEEEEecCCCccccchhHHHHHHHHH-------------------------------HHHHHHHHH--hhhhhhhcC
Confidence 65 99999999999999999999999888 556777765 378999999
Q ss_pred hhHHHHHhhhcCCcccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHHHHHHh
Q 002674 802 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQRILIA 867 (894)
Q Consensus 802 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~~~l~~ 867 (894)
...|.++- ..+ + .|+ .++|||+|+++||+||++++++|++
T Consensus 253 ~~~~~~~~-~~i-~--------------~~~----------~~~rRa~hvv~En~Rvl~a~~Al~~ 292 (390)
T COG0153 253 DEEFAALQ-AEI-E--------------VDP----------KIARRARHVVTENQRVLEAAKALRS 292 (390)
T ss_pred HHHHHhhh-hhc-c--------------cch----------HHHHHHHHHHhHHHHHHHHHHHHHc
Confidence 98888852 222 1 011 2678999999999999999999987
No 2
>PLN02865 galactokinase
Probab=100.00 E-value=1.3e-51 Score=463.27 Aligned_cols=297 Identities=22% Similarity=0.297 Sum_probs=232.8
Q ss_pred HHHHHHhccCCCCCc-eEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCC
Q 002674 482 RERKAAAGLFNWEEE-IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMP 560 (894)
Q Consensus 482 ~~~~~~~~~f~~~~~-~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~ 560 (894)
+-+..|.+.||.++. ..+++||||||||||||||+||+||||||+++|+++++++++++++++
T Consensus 14 ~l~~~F~~~fg~~p~~~~~~~APGRVnlIGEHtDYngG~VLp~AI~~~~~va~~~~~~~~i~v~---------------- 77 (423)
T PLN02865 14 EIRERVAAMSGRNSGEVRVVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDPEVLLR---------------- 77 (423)
T ss_pred HHHHHHHHHhCCCcccceEEEcCcceecccccccCCCCeEEeEEeeccEEEEEEECCCCEEEEE----------------
Confidence 345677889996553 258899999999999999999999999999999999999998765544
Q ss_pred eEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCC
Q 002674 561 VLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAV 640 (894)
Q Consensus 561 ~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~i 640 (894)
|.+ +.+ .+++++++.. .++.+. .....+...|.||++|++..+. +.|..+..||++.|+|+|
T Consensus 78 -----s~~--~~~---~~~~~~~~~~---~~~~~~----~~~~~~~~~W~~Yv~gv~~~l~-~~g~~~~~G~~~~v~g~v 139 (423)
T PLN02865 78 -----SAQ--FEG---EVRFRVDEIQ---HPIANV----SSDSKEESNWGDYARGAVYALQ-SRGHALSQGITGYISGSE 139 (423)
T ss_pred -----ECC--CCC---ceEEeccccc---cccccc----cccCCCCCCHHHHHHHHHHHHH-HcCCCCCCceEEEEECCC
Confidence 321 111 1233332210 011000 0011344689999999999865 677755469999999999
Q ss_pred -CCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEe
Q 002674 641 -PEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVV 719 (894)
Q Consensus 641 -P~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v 719 (894)
|.|+|||||||++||++.|++.+++..+++++++++|+++|+.++|+|||+|||+++++|..|+++++||+++.+ +++
T Consensus 140 pP~gsGLsSSAAl~va~~~al~~~~~~~~~~~~la~~a~~~E~~~~G~~~G~mDQ~as~~~~~g~~~~iDf~~l~~-~~v 218 (423)
T PLN02865 140 GLDSSGLSSSAAVGVAYLLALENANNLTVSPEDNIELDRLIENEYLGLRNGILDQSAILLSRYGCLTFMDCKTLDH-KLV 218 (423)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccccHHHHHhcccCceEEEEccCCCc-cee
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999877 678
Q ss_pred ecC-------CCeEEEEEeCCCCcccC-CCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhh
Q 002674 720 EIP-------SHIRFWGIDSGIRHSVG-GADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE 791 (894)
Q Consensus 720 ~~p-------~~~~~vv~~sgv~~~~~-~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 791 (894)
++| .++.|+++||+++|.++ +++||.||.+|..+.+.|.... + + .
T Consensus 219 pl~~~~~~~~~~~~ivv~~s~~~h~l~~~~~Yn~Rr~Ec~~aa~~l~~~~------------~----------~-----~ 271 (423)
T PLN02865 219 SLQFQQPGGEKPFKILLAFSGLRHALTNKPGYNLRVSECQEAARFLLEAS------------G----------N-----D 271 (423)
T ss_pred ecCcccccCCCCeEEEEEeCCCchhhcccchhhHHHHHHHHHHHHHHHhc------------C----------C-----c
Confidence 876 47899999999999988 8999999999966555543210 0 0 0
Q ss_pred hchhhhhcCChhHHHHHhhhcCCcccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHHHHHHhc
Q 002674 792 ASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQRILIAY 868 (894)
Q Consensus 792 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~~~l~~~ 868 (894)
..+..|++++.+++.... ..+++. +++||+|||+||.||.+++++|+++
T Consensus 272 ~~~~~Lr~~~~~~~~~~~-~~l~~~---------------------------l~~Ra~Hv~~E~~Rv~~~~~al~~~ 320 (423)
T PLN02865 272 ELEPLLCNVEPEVYEAHK-CKLEAV---------------------------LARRAEHYFSENMRVIKGVEAWASG 320 (423)
T ss_pred cchhhhhcCCHHHHHHHH-hhcCHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 124578899888876542 333221 6779999999999999999999873
No 3
>PTZ00290 galactokinase; Provisional
Probab=100.00 E-value=7.6e-51 Score=460.89 Aligned_cols=233 Identities=26% Similarity=0.440 Sum_probs=185.7
Q ss_pred HHHHHhccCCCCCc-----eEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCC
Q 002674 483 ERKAAAGLFNWEEE-----IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQG 557 (894)
Q Consensus 483 ~~~~~~~~f~~~~~-----~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~ 557 (894)
-+..|.+.||.++. .++++||||||||||||||+||+||||||+++|+|+++++++..
T Consensus 18 l~~~F~~~fG~~p~~~~~~~~~~~APGRVnLIGEHtDYngG~VLp~AId~~~~va~~~~~~~~----------------- 80 (468)
T PTZ00290 18 LKPIFLETFKVENDADVEWLLFTFAPGRVNFIGEHVDYMGGYVCPAAVLEGCHILVGRVKHFC----------------- 80 (468)
T ss_pred HHHHHHHHhCCCcccccceeEEEeccceeeecccccccCCCeeeeccccCcEEEEEeecCCCC-----------------
Confidence 34567889996553 17889999999999999999999999999999999998874310
Q ss_pred CCCeEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCC----CCCEE
Q 002674 558 PMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF----EDSIS 633 (894)
Q Consensus 558 ~~~~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~----~~G~~ 633 (894)
.+.+++.+. .. ..|+++ .... ..+...|.||++|+++.++++.|.++ ..||+
T Consensus 81 -~~~i~~~~~---~~---~~~~~~--~~~~---------------~~~~~~W~nYv~gv~~~~l~~~g~~~~~~~~~G~d 136 (468)
T PTZ00290 81 -DHKLRFATE---TD---EHFVLD--HLGG---------------AKHNKAWTTFVRGAATLRLNRLGVAIDAPSLQGVC 136 (468)
T ss_pred -CCeEEEEEC---CC---ceeecC--cccc---------------cCCcccHHHHHHHHHHHHHHHhCCCcccCCCCCeE
Confidence 112444222 11 123322 1100 02236799999999987677777742 25999
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCC-----------------CC---CHHHHHHHHHHHHHhhcCCCCChhh
Q 002674 634 MLVSSAVPEGKGVSSSASVEVASMSAIAAAHGL-----------------NI---HPRDLALLCQKVENHIVGAPCGVMD 693 (894)
Q Consensus 634 i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~-----------------~l---~~~~la~~a~~~E~~~~G~~~G~mD 693 (894)
+.|.|+||.|+|||||||++||++.|++.+++. .+ +..+||++||++||.++|+|||+||
T Consensus 137 ~~i~gdVP~GaGLSSSAAleva~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~aqraEn~~vGv~cGiMD 216 (468)
T PTZ00290 137 MVVHGTLPMGAGMSASASFGVALLNAINTVVTRRYKGCPTSPGRRYSILPPMSKEELIELAKQARRIETEFCGVNVGIMD 216 (468)
T ss_pred EEEeCCCCCCCCcchHHHHHHHHHHHHHHHhhhhccccccccccccccccccCcccHHHHHHHHHHHHHhhcCCCcchhh
Confidence 999999999999999999999999999998732 12 3489999999999999999999999
Q ss_pred hHHhhcCCCCeEEEEEecCCceeEEeecC----CCeEEEEEeCCCCcccCCC---CchhhHHHhhhChHhh
Q 002674 694 QMASACGEANKLLAMVCQPAELLGVVEIP----SHIRFWGIDSGIRHSVGGA---DYGSVRAGAFMGRKMI 757 (894)
Q Consensus 694 q~as~~G~~~~~~~~~~~~~~~~~~v~~p----~~~~~vv~~sgv~~~~~~~---~y~~rr~~~~~g~~~l 757 (894)
|++|++|+.|+++++||+++++ ++++++ .++.|||+||+++|+++++ +||.||.+|..+.+.|
T Consensus 217 Q~asa~g~~~~al~iD~~~l~~-~~v~l~~~~~~~~~~vV~nS~v~h~l~~s~~~~Yn~Rr~ece~a~~~L 286 (468)
T PTZ00290 217 QFISAFAEEDKFMFLDCKSLTF-ESHDMTPLLGDGACFLLIDSMIKHDLLGGTAGMYNTVRSDQEGAQKKI 286 (468)
T ss_pred HHHHHhCCCCcEEEEecCCCeE-EEeccCCCCCCCcEEEEEeCCCcchhccccchhhHHHHHHHHHHHHHh
Confidence 9999999999999999999887 788875 4799999999999998866 9999999886544444
No 4
>PLN02521 galactokinase
Probab=100.00 E-value=2.4e-49 Score=454.71 Aligned_cols=321 Identities=22% Similarity=0.306 Sum_probs=235.3
Q ss_pred HHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCC-chhhhhhhhhhccCCCCCCCCCeE
Q 002674 484 RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISP-SKQRLWKHALARHNDKGQGPMPVL 562 (894)
Q Consensus 484 ~~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d-~~~~l~~~~~~~~~~~~~~~~~~i 562 (894)
...|.+.||.+ |.++++|||||||||||+|||||+||||||+++++|+++++++ ++++
T Consensus 36 ~~~F~~~fg~~-p~~~~~APGRVnLiGEHtDy~gg~vLp~AI~~~~~v~~~~~~~~~~i~-------------------- 94 (497)
T PLN02521 36 KAAFVEVYGAK-PDLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRRAEGSKKLR-------------------- 94 (497)
T ss_pred HHHHHHHHCCC-CCEEEECCceEEEeccceeecCCeEEEEEEcCcEEEEEEEcCCCCEEE--------------------
Confidence 34578899964 5688999999999999999999999999999999999999986 5444
Q ss_pred EEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHH----HHHHHHHHHHhCCCC--CCCEEEEE
Q 002674 563 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYV----AGTILVLMTELGVRF--EDSISMLV 636 (894)
Q Consensus 563 ~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv----~g~i~~~~~~~g~~~--~~G~~i~i 636 (894)
+.|.+ ... ..+.++++... ........|.||+ +|++..+. +.+..+ +.||++.|
T Consensus 95 -i~s~~--~~~--~~~~~~~~~~~--------------~~~~~~~~W~nYv~~~~~gv~~~l~-~~~~~~~~~~g~~i~i 154 (497)
T PLN02521 95 -IANVN--DKY--TTCTFPADPDQ--------------EVDLANHKWGNYFICGYKGVFEFLK-SKGVDVGPPVGLDVVV 154 (497)
T ss_pred -EEECC--CCC--CceeeecCccc--------------ccccccccHHHHHHHHHHHHHHHHH-HhccccCCCCCeEEEE
Confidence 33321 110 01122221100 0012335799999 66666543 444432 24999999
Q ss_pred EeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCcee
Q 002674 637 SSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELL 716 (894)
Q Consensus 637 ~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~ 716 (894)
+|+||+|+|||||||++||++.|++.+++.++++++++++|+++|+ ++|.+||+|||+++++|+.|+++++||+++.+
T Consensus 155 ~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~-~~g~~~g~mDq~as~~g~~g~al~~d~~~l~~- 232 (497)
T PLN02521 155 DGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCER-HIGTQSGGMDQAISIMAQQGVAKLIDFNPVRA- 232 (497)
T ss_pred ecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhC-ccCCCCChHHHHHHHhcCCCcEEEEecCCCce-
Confidence 9999999999999999999999999999999999999999999999 57999999999999999999999999999887
Q ss_pred EEeecCCCeEEEEEeCCCCcc---cCCCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhhhc
Q 002674 717 GVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEAS 793 (894)
Q Consensus 717 ~~v~~p~~~~~vv~~sgv~~~---~~~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 793 (894)
+++++|.++.|||+||+++|. +++++||.||.+|..+.++|..... .+++ . ..+.
T Consensus 233 ~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~~~~~------------~~~~----~------~~~~ 290 (497)
T PLN02521 233 TDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAVKLG------------MSAE----E------AISK 290 (497)
T ss_pred EEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHHhhcC------------Ccch----h------cccc
Confidence 799999999999999996654 8889999999999888777743210 0000 0 0001
Q ss_pred hhhhhcC-----------ChhHHHHHhhhcCCcc-cchhhH--------hhhhCCCCCCceeccCCcccccccccccccc
Q 002674 794 LDYLCNL-----------SPHRFEALYAKNIPES-IVGEEF--------SKNYGDHNDPVTVIDPKRTYFVRAPVCHPIY 853 (894)
Q Consensus 794 ~~~l~~~-----------~~~~~~~~~~~~l~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~ 853 (894)
+..|+|+ +..++....+..+++. .+.+++ .+.+.++.+.++++++++.|.+++||+|||+
T Consensus 291 ~~~Lrd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hvv~ 370 (497)
T PLN02521 291 VKTLSDVEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHVYS 370 (497)
T ss_pred cCCHHHHHHHHhhhcccccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhheec
Confidence 1222222 1111111122222221 222333 3334455667788888899999999999999
Q ss_pred hhhhHHHHHHHHHhcc
Q 002674 854 ENFRVKVCQRILIAYL 869 (894)
Q Consensus 854 E~~Rv~~~~~~l~~~~ 869 (894)
||.||.+|+++|+++.
T Consensus 371 E~~RV~~~~~al~~~~ 386 (497)
T PLN02521 371 EAKRVHAFRDTVSSSL 386 (497)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999864
No 5
>PRK05322 galactokinase; Provisional
Probab=100.00 E-value=8.1e-47 Score=426.20 Aligned_cols=284 Identities=26% Similarity=0.388 Sum_probs=229.9
Q ss_pred HHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEE
Q 002674 484 RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQ 563 (894)
Q Consensus 484 ~~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~ 563 (894)
...|...||.+ |..+++|||||||||||+||+||+|||+||++++++++++++++++++.
T Consensus 7 ~~~f~~~fg~~-p~~~~~APgRv~L~GEH~d~~g~~vl~~AI~~~~~v~~~~~~~~~i~i~------------------- 66 (387)
T PRK05322 7 KKKFAEVFGEE-AEDVFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDDKKVRLY------------------- 66 (387)
T ss_pred HHHHHHHhCCC-CceEEEcCceeEecccceeecCceeeeeeccceEEEEEEECCCCEEEEE-------------------
Confidence 34577889864 5678999999999999999999999999999999999999988765443
Q ss_pred EEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCC
Q 002674 564 IVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEG 643 (894)
Q Consensus 564 i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g 643 (894)
|.+ +... ..++++++++. ......|.+|++|++..+. ..+.++..||++.|.|+||+|
T Consensus 67 --s~~--~~~~-~~~~~~~~~~~----------------~~~~~~w~~y~~gvi~~l~-~~~~~~~~g~~i~i~s~iP~g 124 (387)
T PRK05322 67 --SAN--FEDL-GIIEFDLDDLS----------------FDKEDDWANYPKGVLKFLQ-EAGYKIDHGFDILIYGNIPNG 124 (387)
T ss_pred --ECC--CCCC-ceEEEeccccC----------------CCCccchHHHHHHHHHHHH-HcCCCCCCCEEEEEecCCCCC
Confidence 331 1100 01223332210 1233579999999988754 566544369999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecC-
Q 002674 644 KGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP- 722 (894)
Q Consensus 644 ~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p- 722 (894)
+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++||.++++++||+++++ +.++++
T Consensus 125 sGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~sG~mDq~as~~G~~~~~~~~d~~~~~~-~~~~~~~ 203 (387)
T PRK05322 125 AGLSSSASIELLTGVILKDLFNLDLDRLELVKLGQKTENEFIGVNSGIMDQFAIGMGKKDHAILLDCNTLEY-EYVPLDL 203 (387)
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhccCCCCcchHHHHHHHhccCCeEEEEecCCCce-EEeccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876 688886
Q ss_pred CCeEEEEEeCCCCcccCCCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhhhchhhhhcCCh
Q 002674 723 SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 802 (894)
Q Consensus 723 ~~~~~vv~~sgv~~~~~~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 802 (894)
.++.|+|+|||++|++++++||.||.+|.. +++.|++...+..|+++++
T Consensus 204 ~~~~lvv~dsg~~~~~~~~~yn~r~~e~~~-------------------------------a~~~l~~~~~~~~l~~~~~ 252 (387)
T PRK05322 204 GDYVIVIMNTNKRRELADSKYNERRAECEK-------------------------------ALEELQKKLDIKSLGELTE 252 (387)
T ss_pred CCeEEEEEECCCccccCcchhhHHHHHHHH-------------------------------HHHHHhhhcCccchhcCCH
Confidence 567899999999999999999999999843 3444443334567888888
Q ss_pred hHHHHHhhhcCCcccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHHHHHHhc
Q 002674 803 HRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQRILIAY 868 (894)
Q Consensus 803 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~~~l~~~ 868 (894)
++++... ..+++ ..+++|++|+|+|+.||.++.++|+++
T Consensus 253 ~~~~~~~-~~~~~--------------------------~~~~~r~~h~v~e~~r~~~~~~al~~~ 291 (387)
T PRK05322 253 EEFDEYS-YLIKD--------------------------ETLLKRARHAVTENQRTLKAVKALKAG 291 (387)
T ss_pred HHHHHHH-hhcCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8877753 33311 127789999999999999999999874
No 6
>PRK05101 galactokinase; Provisional
Probab=100.00 E-value=3.7e-44 Score=404.31 Aligned_cols=279 Identities=27% Similarity=0.426 Sum_probs=224.5
Q ss_pred HHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeE
Q 002674 483 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVL 562 (894)
Q Consensus 483 ~~~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i 562 (894)
-...|...||.+ |.++++|||||||+|||+||+||+||++||+++++|.+++++++++++.
T Consensus 7 ~~~~f~~~fg~~-p~~~~~APgRvnL~GeH~Dy~gg~vL~~AId~~~~v~i~~~~~~~i~v~------------------ 67 (382)
T PRK05101 7 TQSLFAQQFGYP-PTHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRVI------------------ 67 (382)
T ss_pred HHHHHHHHhCCC-CCeEEECCceEEEeccceeecCCEEEEEEecccEEEEEEECCCCEEEEE------------------
Confidence 445677889864 5678999999999999999999999999999999999999887755443
Q ss_pred EEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCC
Q 002674 563 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPE 642 (894)
Q Consensus 563 ~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~ 642 (894)
+.+ +... ...++++. ++ ...+...|.||+++++..+. ..+... .|+++.|.|+||+
T Consensus 68 ---s~~--~~~~--~~~~~~~~------~~---------~~~~~~~w~~yv~~~~~~l~-~~~~~~-~g~~i~i~~~iP~ 123 (382)
T PRK05101 68 ---AAD--YDNQ--QDEFSLDA------PI---------VPHPEQQWANYVRGVVKHLQ-ERNPDF-GGADLVISGNVPQ 123 (382)
T ss_pred ---ECC--CCCC--ceEEecCc------cc---------ccCCCCchHHHHHHHHHHHH-HhCCCC-CCeEEEEeCCCCC
Confidence 221 1100 11222221 01 01334689999999998765 334333 6999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecC
Q 002674 643 GKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP 722 (894)
Q Consensus 643 g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p 722 (894)
|+|||||||++||++.|++.+++.++++++|+++|+++|+.++|+|||+|||+++++||.++++++++++..+ +++++|
T Consensus 124 gaGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~~Dq~~s~~G~~~~~~~~d~~~~~~-~~~~~~ 202 (382)
T PRK05101 124 GAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLET-KAVPMP 202 (382)
T ss_pred CCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccHHHHHHHcCCCCeEEEEEcCCCce-EEeeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998876 688999
Q ss_pred CCeEEEEEeCCCCcccCCCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhhhchhhhhcCCh
Q 002674 723 SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 802 (894)
Q Consensus 723 ~~~~~vv~~sgv~~~~~~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 802 (894)
.++.|+|+|||++|++..++||.||.+|..+ ...+ .++.|+++++
T Consensus 203 ~~~~~vv~~sg~~~~l~~~~y~~r~~e~~~A-------------------------------~~~l----~~~~l~~~~~ 247 (382)
T PRK05101 203 EGVAVVIINSNVKRGLVDSEYNTRRQQCETA-------------------------------ARFF----GVKALRDVTL 247 (382)
T ss_pred CCcEEEEEeCCCCccccccchhHHHHHHHHH-------------------------------HHHh----ChHhhhcCCH
Confidence 9999999999999999999999999888432 2222 1345667766
Q ss_pred hHHHHHhhhcCCcccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHHHHHHhc
Q 002674 803 HRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQRILIAY 868 (894)
Q Consensus 803 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~~~l~~~ 868 (894)
++++... ..|++. +++|++|+++||+||.+++++|+++
T Consensus 248 ~~~~~~~-~~l~~~---------------------------~~~r~~h~i~E~~rv~~a~~al~~~ 285 (382)
T PRK05101 248 EQFNAVA-AELDPV---------------------------VAKRARHVITENARTLEAASALAAG 285 (382)
T ss_pred HHHHHHH-hhCCHH---------------------------HHHHHHHHhHHHHHHHHHHHHHHcC
Confidence 6665543 334321 5679999999999999999999974
No 7
>TIGR00131 gal_kin galactokinase. The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity.
Probab=100.00 E-value=8.1e-44 Score=403.72 Aligned_cols=283 Identities=25% Similarity=0.382 Sum_probs=222.0
Q ss_pred HHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEE
Q 002674 484 RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQ 563 (894)
Q Consensus 484 ~~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~ 563 (894)
...|...||.+ |+++++|||||||+|||+||+||+||++||++++++.+++++++++++.
T Consensus 5 ~~~f~~~fg~~-p~~~~~APgrv~L~GeH~dy~g~~vl~~AI~~~~~v~~~~~~~~~i~i~------------------- 64 (386)
T TIGR00131 5 QKIFASAFGAK-PDFTARAPGRVNLIGEHTDYNDGSVLPCAIDFGTLCAVAVRDDKNVRIY------------------- 64 (386)
T ss_pred HHHHHHHHCCC-CCEEEECCcceEeeccceeeCCceEEeeEeeccEEEEEEECCCCeEEEE-------------------
Confidence 34667788864 5688999999999999999999999999999999999999987654433
Q ss_pred EEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCC
Q 002674 564 IVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEG 643 (894)
Q Consensus 564 i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g 643 (894)
+.+ +......++++.. . .......|.+|+++++..+.+ .+.....||++.|+|+||+|
T Consensus 65 --~~~--~~~~~~~~~~~~~--------~---------~~~~~~~w~~y~~~~~~~~~~-~~~~~~~g~~i~i~s~iP~g 122 (386)
T TIGR00131 65 --LAN--ADNKFAERSLDLP--------L---------DGSEVSDWANYFKGVLHVAQE-RFNSFPLGADIVCSGNVPTG 122 (386)
T ss_pred --ECC--CCCcceEEECCCC--------C---------CCCCCCCcHhHHHHHHHHHHH-hcCCCCCceEEEEECCCCCC
Confidence 221 1110011222211 0 012236899999999988764 34433359999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCC
Q 002674 644 KGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS 723 (894)
Q Consensus 644 ~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~ 723 (894)
+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++||.|++++++|++.++ +++++|.
T Consensus 123 sGLgSSAA~~vA~~~al~~~~~~~~~~~~l~~~a~~~E~~~~G~~~g~~Dq~~s~~G~~~~~l~~~~~~~~~-~~~~~~~ 201 (386)
T TIGR00131 123 SGLSSSAAFECAVGAVLQNMGHLPLDSKQILLRIQVAENHFVGVNCGIMDQAASVLGKEDHALLVECRSLKA-TPFKFPQ 201 (386)
T ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCccCCCcchHHHHHHHhccCCcEEEEEcCCCce-eeecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876 6888886
Q ss_pred -CeEEEEEeCCCCcccCCCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhhhchhhhhcCCh
Q 002674 724 -HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 802 (894)
Q Consensus 724 -~~~~vv~~sgv~~~~~~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 802 (894)
++.|+|+|||++|++.++.||.||.+|..+.+.+ +.. ....|+++.+
T Consensus 202 ~~~~lvv~~s~~~~~t~~~~y~~r~~e~~~a~~~l-------------------------------~~~-~~~~lr~~~~ 249 (386)
T TIGR00131 202 LGIAFVIANTNVKRTLAPSNYNTRRQECTTAANFL-------------------------------AAT-DKGALRDFMN 249 (386)
T ss_pred CCeEEEEEeCCCccccccchhHHHHHHHHHHHHHh-------------------------------ccc-cccchhhCCH
Confidence 8999999999999999999999998885443333 211 0235666666
Q ss_pred hHHHHHh--hhcCCcccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHHHHHHhc
Q 002674 803 HRFEALY--AKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQRILIAY 868 (894)
Q Consensus 803 ~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~~~l~~~ 868 (894)
+++.... -..+.+ .+++|++|+|+||.||.+|+++|+++
T Consensus 250 ~~~~~~~~~~~~~~~---------------------------~~~~r~~h~v~e~~rv~~~~~al~~~ 290 (386)
T TIGR00131 250 EYFARYIARLTKMLP---------------------------LVEERAKHVVSENLRVLKAVKAMKDN 290 (386)
T ss_pred HHHhhhHhhHhhcCH---------------------------HHHhhHheeehHHHHHHHHHHHHHhC
Confidence 6554321 011211 15569999999999999999999874
No 8
>PRK00555 galactokinase; Provisional
Probab=100.00 E-value=8e-44 Score=398.57 Aligned_cols=263 Identities=27% Similarity=0.328 Sum_probs=210.0
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002674 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (894)
++++|||||||||||+|||||+|||+||+++++|++++++++++++. |.. +.. .
T Consensus 3 ~~~~APGRv~LiGEH~dy~~g~vl~~Ai~~~~~v~~~~~~~~~i~i~---------------------s~~--~~~---~ 56 (363)
T PRK00555 3 VRYAAPGRINLIGEHTDYNLGFALPIALPQRTVVTFTPEHTDAITAS---------------------SDR--ADG---S 56 (363)
T ss_pred EEEEcCceEEeecccccCCCCeEEeEEeeccEEEEEEECCCCEEEEE---------------------ECC--CCC---c
Confidence 57899999999999999999999999999999999999998765443 321 110 1
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHH
Q 002674 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (894)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~ 657 (894)
++++++.. ......|.+|++|++..+. +.|..+ .|+++.|.|+||+|+|||||||++||++
T Consensus 57 ~~~~~~~~-----------------~~~~~~w~~y~~gv~~~l~-~~g~~~-~g~~i~i~s~iP~g~GLgSSAA~~va~~ 117 (363)
T PRK00555 57 ARIPLDTT-----------------PGQVTGWAAYAAGVIWALR-GAGHPV-PGGAMSITSDVEIGSGLSSSAALECAVL 117 (363)
T ss_pred eEEecCCC-----------------CCCCcchHHHHHHHHHHHH-HcCCCC-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 22232210 0223579999999988754 567654 6999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCC---CeEEEEEeCCC
Q 002674 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS---HIRFWGIDSGI 734 (894)
Q Consensus 658 ~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~---~~~~vv~~sgv 734 (894)
.|++.++|.++++++++++|+++|+.++|+|||+|||+++++||.|++++++|++..+ +++++|. ++.|+++||++
T Consensus 118 ~al~~~~~~~~~~~~la~~a~~aE~~~~G~~~G~~Dq~as~~G~~~~~~~~d~~~~~~-~~v~~~~~~~~~~lvv~~s~~ 196 (363)
T PRK00555 118 GAVGAATGTRIDRLEQARLAQRAENEYVGAPTGLLDQLAALFGAPKTALLIDFRDLTV-RPVAFDPDAAGVVLLLMDSRA 196 (363)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCChhHHHHHHhCCCCeEEEEEcCCCcE-EEeccCCCcCceEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999999999988766 6888764 46799999999
Q ss_pred CcccCCCCchhhHHHhhhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHHhHhhhhchhhhhcCChhHHHHHhhhcCC
Q 002674 735 RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIP 814 (894)
Q Consensus 735 ~~~~~~~~y~~rr~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~ 814 (894)
+|.+++++||.||.+|....+. ++ .+.++++.++.+... ....+
T Consensus 197 ~~~~~~~~y~~rr~~~~~~~~~-------------------------------~~----~~~lr~~~~~~~~~~-~~~~~ 240 (363)
T PRK00555 197 RHRHAGGEYAARRASCERAAAD-------------------------------LG----VSSLRAVQDRGLAAL-GAIAD 240 (363)
T ss_pred cccccchhhHHHHHHHHHHHHH-------------------------------hC----ccchhcCCHHHHHHH-HhcCC
Confidence 9999999999999888432211 11 234555555444432 11111
Q ss_pred cccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHHHHHHhcc
Q 002674 815 ESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQRILIAYL 869 (894)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~~~l~~~~ 869 (894)
+ ..++|++|+++||.||.+++++|+++.
T Consensus 241 ~---------------------------~~~~r~~h~~~e~~~v~~~~~al~~gd 268 (363)
T PRK00555 241 P---------------------------IDARRARHVLTENQRVLDFAAALADSD 268 (363)
T ss_pred h---------------------------HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 246699999999999999999998753
No 9
>PRK03817 galactokinase; Provisional
Probab=100.00 E-value=4.1e-35 Score=328.87 Aligned_cols=204 Identities=31% Similarity=0.516 Sum_probs=171.3
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 002674 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (894)
Q Consensus 499 ~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (894)
.++|||||+|+|||+||+||+||+|||+++++|.+++++ ++ .+.+.+ +.. ..
T Consensus 2 ~~~APgrv~L~Geh~d~~~g~~l~~aI~~~~~v~~~~~~--~~---------------------~i~~~~--~~~---~~ 53 (351)
T PRK03817 2 KVKSPGRVNLIGEHTDYNDGYVLPFAINLYTFLEIEKSE--KF---------------------IFYSEN--FNE---EK 53 (351)
T ss_pred EEEeeeeEEEeccceeeCCCeEEEEEecCcEEEEEEeCC--eE---------------------EEEECC--CCC---cE
Confidence 478999999999999999999999999999999998752 22 232221 111 12
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHH
Q 002674 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (894)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~ 658 (894)
+++++++ .....|.+|+.+++..+ ++.+... .||++.|+|+||.|+|||||||++||++.
T Consensus 54 ~~~~~~~------------------~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~i~s~iP~~~GLgSSaa~~va~~~ 113 (351)
T PRK03817 54 TFELDKL------------------EKLNSWADYIKGVIWVL-EKRGYEV-GGVKGKVSSNLPIGAGLSSSASLEVAVAY 113 (351)
T ss_pred EEeCCcc------------------CCCCchHHHHHHHHHHH-HHcCCCC-CCeEEEEeCCCCCCCCcCcHHHHHHHHHH
Confidence 2232221 12357999999998765 4556554 69999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 659 al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
|++.+++.++++++++++|+++|+.++|+++|+|||+++++|+.++++++++++..+ .++++|.+++|++++||.+|.+
T Consensus 114 al~~~~~~~~~~~~l~~~a~~~E~~~~g~~~g~~D~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~sg~~~~~ 192 (351)
T PRK03817 114 ALNEAYNLNLSKLELALLAREAENEFVGVPCGIMDQFAVAFGKKDHAIFLDTMTLEY-EYVPFPEDYEILVFDTGVKREL 192 (351)
T ss_pred HHHHHhCCCCCHHHHHHHHHHhcccccCCCCcCchhhheeeccCCEEEEEecCCCce-EEEecCCCcEEEEEeCCCcccc
Confidence 999999999999999999999999999999999999999999999999999988665 6888999999999999999998
Q ss_pred CCCCchhhHHHhh
Q 002674 739 GGADYGSVRAGAF 751 (894)
Q Consensus 739 ~~~~y~~rr~~~~ 751 (894)
.+.+||.||..|.
T Consensus 193 ~~~~~~~~~~~~~ 205 (351)
T PRK03817 193 ASSEYNERRQECE 205 (351)
T ss_pred ccchhHHHHHHHH
Confidence 8889999987774
No 10
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-36 Score=326.35 Aligned_cols=330 Identities=22% Similarity=0.257 Sum_probs=223.0
Q ss_pred HHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEE
Q 002674 485 KAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQI 564 (894)
Q Consensus 485 ~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i 564 (894)
.++...|+. .+.++++|||||||||||+||+|+.|+|||||..+.+++.+++|+++ .+++
T Consensus 28 ~~~~~~~~~-kp~~~a~~PgRVnLiGEHiDy~~~sVlpmaid~~~l~~~~~~~d~~~-------------------sl~~ 87 (489)
T KOG0631|consen 28 GAFQAAYGA-KPVFVARAPGRVNLIGEHIDYCGYSVLPMAIDVDTLIAVAPSDDGIV-------------------SLRL 87 (489)
T ss_pred HHHHHhhCC-CceEEEecCCceecccceeeecCceeeeEEeeeeeEEEEEEcCCCce-------------------eEEE
Confidence 345568884 56789999999999999999999999999999999999999998753 2445
Q ss_pred EecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHh---CCCCCC--CEEEEEEeC
Q 002674 565 VSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVRFED--SISMLVSSA 639 (894)
Q Consensus 565 ~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~---g~~~~~--G~~i~i~s~ 639 (894)
.+++++|.. +++++... . ..+ ....++|.||++|.+..+.+.. +..... |+.+...|+
T Consensus 88 tN~~~~f~~----~~~~~p~~-~----~~I--------~~~~~~w~ny~~C~~~g~h~~~~~~~~~~~~~vGl~~l~~g~ 150 (489)
T KOG0631|consen 88 TNFNPDFIY----FKYPLPSI-V----WQI--------DPDVSKWENYFYCGMKGFHEYIKRKPVRFEPPVGLSILNDGS 150 (489)
T ss_pred ecCCCccce----eeccCCch-h----ccc--------CCCccchhhhhccchHHHHHHHhccccccCCCcceEEEecCC
Confidence 555555432 34443220 0 000 1234799999977776665544 333223 999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHh-CCC--CCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEE--ecCCc
Q 002674 640 VPEGKGVSSSASVEVASMSAIAAAH-GLN--IHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV--CQPAE 714 (894)
Q Consensus 640 iP~g~GLgSSAAl~va~~~al~~l~-~~~--l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~--~~~~~ 714 (894)
+|.|+|||||||+.|+.+.|...+. |.+ +++.+++.++..+|+. .|+++|+|||+++++|..+++++++ +.|.+
T Consensus 151 vPtgsgLsSsaa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae~~-~G~~~gGmdq~asvl~~~~~Al~v~~~~~Pf~ 229 (489)
T KOG0631|consen 151 VPTGSGLSSSAAWLCAAALATLKLNLGPNFIISKKDLATITVVAESY-IGLNSGGMDQAASVLAEKGHALLVDPYFTPFR 229 (489)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHhcCCCcccchhhhhcceEEeecc-cCcCCCcHHHHHHHHHhcCceEEecccCCccc
Confidence 9999999999999999999999998 877 8999999999999975 5999999999999999999999999 55776
Q ss_pred eeEEeecCCCeEEEEEeCCCCcc---cCCCCchhhHHHh-----hhChHhhhhhccCCCCCCCCCCCCCCCCCcchhhHH
Q 002674 715 LLGVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGA-----FMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVE 786 (894)
Q Consensus 715 ~~~~v~~p~~~~~vv~~sgv~~~---~~~~~y~~rr~~~-----~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (894)
. ..++++..-.|+|.+|.+... ++.++||.|..++ .++.+.+...+... .+.+..+- |+....++++
T Consensus 230 ~-~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlRv~E~~ia~~~la~k~~~~~~~~~-~~~~~~~~---~~~~i~~~~~ 304 (489)
T KOG0631|consen 230 R-SMLKLPDGGVFVIANSLVESNKAETAETNYNLRVVEGTIAAGELAAKILVELPAYI-LRYQLQRA---WRGDIGEGYE 304 (489)
T ss_pred c-ccccCCCCceEEEechhhhhcchhhhhhhhhceeEeeehhhHHHHHHhhcccHHHH-Hhhhhhhc---cccccchhHH
Confidence 6 678888788999999999875 4678999985433 33322222221000 00000000 1101111122
Q ss_pred hHhhhh--chhhhh--cCChhHHHHHhhhcCCcccchhhHhhhhCCCCCCceeccCCcccccccccccccchhhhHHHHH
Q 002674 787 LLEAEA--SLDYLC--NLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKVCQ 862 (894)
Q Consensus 787 ~l~~~~--~~~~l~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ra~Hv~~E~~Rv~~~~ 862 (894)
.+.+.. -.++|. .++.++... .| ..+.++|.+.+.+.+.- ..+.++++|||+||++|+.||++|.
T Consensus 305 ~~~~~l~~v~~~~~~e~f~~ee~~~----~l--~~~~~~f~~~~~T~~~v-----~~~~~k~~~rakHv~sea~rv~q~~ 373 (489)
T KOG0631|consen 305 RAEEMLGLVEESLKPEGFNIEEVAR----AL--GLDTEEFLQSLLTLAAV-----DLQVKKLYQRAKHVYSEALRVLQEE 373 (489)
T ss_pred HHHHHHHHHHhhcCcCCCCHHHHHH----Hh--ccchHHHHHHhccccch-----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111000 000000 111111111 11 12334555555543321 3466789999999999999999999
Q ss_pred HHHHhc
Q 002674 863 RILIAY 868 (894)
Q Consensus 863 ~~l~~~ 868 (894)
.+|...
T Consensus 374 ~~~~~a 379 (489)
T KOG0631|consen 374 KLCARA 379 (489)
T ss_pred HHHhcC
Confidence 999873
No 11
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.98 E-value=5.4e-31 Score=292.21 Aligned_cols=312 Identities=28% Similarity=0.453 Sum_probs=211.8
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHH
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~ 95 (894)
|||+|++++.|+||++||++||++| +||+|+|++......+.. +.+.+..+ .+.+... ....++...++...
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 72 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLK----PRFPVREI-PGLGPIQ-ENGRLDRWKTVRNN 72 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhc----cccCEEEc-cCceEec-cCCccchHHHHHHH
Confidence 6899999999999999999999999 599999999876322111 11112211 1222221 11234554555544
Q ss_pred HHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHH-hh
Q 002674 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA-ED 174 (894)
Q Consensus 96 ~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~-~~ 174 (894)
..+.. .....+.++.+++++++||+||+|+++.+..+|+..|+|++.++|..|...+....+. ...+..+..+.. ..
T Consensus 73 ~~~~~-~~~~~~~~~~~~l~~~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 150 (318)
T PF13528_consen 73 IRWLA-RLARRIRREIRWLREFRPDLVISDFYPLAALAARRAGIPVIVISNQYWFLHPNFWLPW-DQDFGRLIERYIDRY 150 (318)
T ss_pred HHhhH-HHHHHHHHHHHHHHhcCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHcccccCCcch-hhhHHHHHHHhhhhc
Confidence 43321 3344556778899999999999999999999999999999999887755322111110 011122222222 22
Q ss_pred -ccccceeeecCCCCCCCCCCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCChhhhHHhhCC-CCcEEEE
Q 002674 175 -YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCLV 252 (894)
Q Consensus 175 -y~~~~~ll~~p~~~~~p~~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~~l~~~Ll~-~~~~~vv 252 (894)
+..++..+..++..+.+...++..+|+..+. +.++.. +.+.+.|+|++|+.+.+ .+.+.+.. +++.+++
T Consensus 151 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~--~~~~~~iLv~~gg~~~~-~~~~~l~~~~~~~~~v 221 (318)
T PF13528_consen 151 HFPPADRRLALSFYPPLPPFFRVPFVGPIIRP------EIRELP--PEDEPKILVYFGGGGPG-DLIEALKALPDYQFIV 221 (318)
T ss_pred cCCcccceecCCccccccccccccccCchhcc------cccccC--CCCCCEEEEEeCCCcHH-HHHHHHHhCCCCeEEE
Confidence 3444444444444222222233334443321 111111 23567899999998876 55554433 4577777
Q ss_pred eCCCCC-CCCCCeEECCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEc
Q 002674 253 CGASDS-QLPPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (894)
Q Consensus 253 ~G~~~~-~lp~nv~v~g~~-~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~ 330 (894)
.|.... ..++|+++.+|. .+++++|+.||++||++|++|++|++++|+|+|++|+..+.||..||+++++.|+|+.++
T Consensus 222 ~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~ 301 (318)
T PF13528_consen 222 FGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLS 301 (318)
T ss_pred EcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcc
Confidence 777652 257899999987 788999999999999999999999999999999999887899999999999999999999
Q ss_pred cCCCCcccHHHHHHHH
Q 002674 331 RRDLLTGHWKPYLERA 346 (894)
Q Consensus 331 ~~~~~~~~l~~~l~~l 346 (894)
.++++++.+.++|+++
T Consensus 302 ~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 302 QEDLTPERLAEFLERL 317 (318)
T ss_pred cccCCHHHHHHHHhcC
Confidence 9999988888888764
No 12
>TIGR00549 mevalon_kin mevalonate kinase. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped.
Probab=99.95 E-value=9.9e-28 Score=260.48 Aligned_cols=180 Identities=26% Similarity=0.312 Sum_probs=143.1
Q ss_pred cCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCceecc
Q 002674 502 APGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMD 581 (894)
Q Consensus 502 APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~~~ 581 (894)
|||||+|||||+||+||+||++||++++++++++++++ ++ +.+.. +..+
T Consensus 1 aPgkv~L~GEH~v~~g~~al~~aI~~~~~~~~~~~~~~-~~---------------------i~~~~---------~~~~ 49 (273)
T TIGR00549 1 APGKIILFGEHAVVYGEPAIAAPIPLRTTVTVIESSDG-SF---------------------IESDL---------GRGS 49 (273)
T ss_pred CCceEEEEecChhccCCCeeEEEecccEEEEEEEcCCC-ce---------------------Eeccc---------cCCc
Confidence 79999999999999999999999999999999987664 22 21110 1101
Q ss_pred CCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHH
Q 002674 582 LSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIA 661 (894)
Q Consensus 582 l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~ 661 (894)
.... ......|.+|+++++..+. ..+ ..|+++.++|+||.|+|||||||++||++.|++
T Consensus 50 ~~~~-----------------~~~~~~~~~~v~~~l~~~~-~~~---~~~~~i~i~s~iP~g~GLGSSaa~~va~~~al~ 108 (273)
T TIGR00549 50 LDDA-----------------PQELDGLVSYIAEALSYFS-ELN---PPPLEIEIDSEIPPGRGLGSSAAVAVALIRALA 108 (273)
T ss_pred HhHh-----------------hHHHHHHHHHHHHHHHHhh-ccC---CCCEEEEEecCCCCCCCccHHHHHHHHHHHHHH
Confidence 1000 0123579999999987654 222 135999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 662 AAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 662 ~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
.+++.++++++++++|+.+|+.++|.+|| +||+++++||. ++++++... ..+..+.+..+++++||+++++.
T Consensus 109 ~~~~~~~~~~~l~~~a~~~E~~~~G~~sG-~D~~~~~~Gg~---~~~~~~~~~--~~~~~~~~~~lvl~~tg~~~~T~ 180 (273)
T TIGR00549 109 DYFGSELSKEELAKLANEAEKIAHGKPSG-IDTATSTYGGP---VYFEKGEGE--FTKLISLDGYFVIADTGVSGSTK 180 (273)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHhCCCCch-HhHHHHhcCCe---EEEEcCCCc--eeeccCCCeEEEEEECCCCCcHH
Confidence 99999999999999999999999999999 59999999984 556655432 24444567899999999999874
No 13
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.95 E-value=8.2e-26 Score=263.86 Aligned_cols=371 Identities=12% Similarity=0.063 Sum_probs=227.4
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCccc----c-cccc-----
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQ----A-DALT----- 85 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~----~-~~~~----- 85 (894)
.+|+.+++..|.+|..-+..++++|++|||+||++++.+....... +.+.+..-.......... . ....
T Consensus 21 ~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (507)
T PHA03392 21 ARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASH-LCGNITEIDASLSVEYFKKLVKSSAVFRKRGVV 99 (507)
T ss_pred ccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccC-CCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhh
Confidence 4577677778999999999999999999999999976542211110 111211111110000000 0 0000
Q ss_pred cCHHHHHH-HHHHHhhcchHHhH--HHHHHHHh--cCCCcEEEECC-chhHHHHHHHh-CCcEEEEecCc---hh-HHHH
Q 002674 86 VDRLASLE-KYSETAVAPRKSIL--KDEVEWLN--SIKADLVVSDV-VPVACRAAADA-GIRSVCVTNFS---WD-FIYA 154 (894)
Q Consensus 86 ~d~~~~l~-~~~~~~~~~~~~ll--~~~~~~L~--~~~PDlVV~D~-~~~a~~aA~~l-gIP~V~isn~~---~~-~~~~ 154 (894)
.+...... .+..+.. .....+ ....++|+ +.++|+||+|. ..|++..|+.+ ++|.|.++... +. ....
T Consensus 100 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~g 178 (507)
T PHA03392 100 ADSSTVTADNYMGLVR-MISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMG 178 (507)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhc
Confidence 00000000 0111000 111122 12357777 77899999995 78888889999 99998875432 10 0000
Q ss_pred ------HHHhhhc----cc---hHHHH-------------------HHHHhhc-cc-----------cceeeec-C--CC
Q 002674 155 ------EYVMAAG----HH---HRSIV-------------------WQIAEDY-SH-----------CEFLIRL-P--GY 187 (894)
Q Consensus 155 ------~~~~~~~----~~---~~~i~-------------------~~l~~~y-~~-----------~~~ll~~-p--~~ 187 (894)
.|+|... +. .+++. +++.+.+ .. .+.++.. . ..
T Consensus 179 g~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d 258 (507)
T PHA03392 179 AVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFD 258 (507)
T ss_pred cCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCcccc
Confidence 1222100 00 01110 0111111 11 0111110 0 11
Q ss_pred CCCCCCCceeecCcccc---cCccChHHHHHHhCCCCCCcEEEEEcCCCCC----hhhh----HHhhCCCCcEEEEe-CC
Q 002674 188 CPMPAFRDVIDVPLVVR---RLHKSRKEVRKELGIEDDVKLLILNFGGQPA----GWKL----KEEYLPSGWKCLVC-GA 255 (894)
Q Consensus 188 ~~~p~~~~v~~vp~~~~---~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~----~~~l----~~~Ll~~~~~~vv~-G~ 255 (894)
.+.|..++++.+|+... .....++++.+++.- .++++||+|+||... +.++ ++++...+.++++. +.
T Consensus 259 ~~rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~-~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~ 337 (507)
T PHA03392 259 NNRPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNN-STNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDG 337 (507)
T ss_pred CCCCCCCCeeeecccccCCCCCCCCCHHHHHHHhc-CCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 23344567778887532 223445678777763 244799999999742 2233 33443444566554 32
Q ss_pred -CCC-CCCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002674 256 -SDS-QLPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (894)
Q Consensus 256 -~~~-~lp~nv~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~ 329 (894)
... .+|+||.+.+ |+| ++|++ +++||||||.||++||+++|||+|++| .+.||+.||++++++|+|+.+
T Consensus 338 ~~~~~~~p~Nv~i~~---w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP--~~~DQ~~Na~rv~~~G~G~~l 412 (507)
T PHA03392 338 EVEAINLPANVLTQK---WFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP--MMGDQFYNTNKYVELGIGRAL 412 (507)
T ss_pred CcCcccCCCceEEec---CCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECC--CCccHHHHHHHHHHcCcEEEe
Confidence 222 4789999875 666 79965 999999999999999999999999999 688999999999999999999
Q ss_pred ccCCCCcccHHHHHHHHHhcCCCcc-----------CCCCHHHHHHHHHHHHHccCcccCCCCc-hhhhhHHHHHhcccc
Q 002674 330 IRRDLLTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLS-GARRLRDAIIFGYEL 397 (894)
Q Consensus 330 ~~~~~~~~~l~~~l~~ll~~~~~~~-----------~~~~g~~~~A~~i~~~l~~~~~~~~~~~-ga~~L~~a~~~~~~~ 397 (894)
+..+++.+++.++|+++++++ .|+ +++..+.+.|.+|.|+ +.||. |+.|||
T Consensus 413 ~~~~~t~~~l~~ai~~vl~~~-~y~~~a~~ls~~~~~~p~~~~~~av~~iE~-------v~r~~~g~~~lr--------- 475 (507)
T PHA03392 413 DTVTVSAAQLVLAIVDVIENP-KYRKNLKELRHLIRHQPMTPLHKAIWYTEH-------VIRNKHGNTSLK--------- 475 (507)
T ss_pred ccCCcCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-------HHhCCCCccccc---------
Confidence 999999999999999999876 332 5665555555566666 56788 999999
Q ss_pred ccCCCcccCcccccccccc
Q 002674 398 QRVPGRDVSIPEWYQTAED 416 (894)
Q Consensus 398 q~~~~~~~~~p~~~~~~~~ 416 (894)
+++.+++ |++|+..
T Consensus 476 --~~~~~l~---~~qy~~l 489 (507)
T PHA03392 476 --TKAANVS---YSDYFMS 489 (507)
T ss_pred --ccccCCC---HHHHHHH
Confidence 9999999 8888765
No 14
>PLN02677 mevalonate kinase
Probab=99.94 E-value=6e-27 Score=261.75 Aligned_cols=206 Identities=22% Similarity=0.327 Sum_probs=137.7
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCC----chhhhhhhhhhccCCCCCCCCCeEEEEecccccCC
Q 002674 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISP----SKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d----~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (894)
+.++|||||+|+|||+||+|++++++||++++++.+++++. +.+.+. +|++.+
T Consensus 3 i~v~apgk~~l~Geh~~~~g~~a~~~ai~~~~~~~~~~~~~~~~~~~i~~~--------------~~di~~--------- 59 (387)
T PLN02677 3 VKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVSLRFPPSAENDDTLKLQ--------------LKDLGL--------- 59 (387)
T ss_pred eEEeCCccEEEeeeeeeecCCeeeeeEeeceEEEEEEecCCCCCCCeEEEE--------------cCCCCc---------
Confidence 57899999999999999999999999999999999998532 222211 233221
Q ss_pred CCCceeccCCcccc---------CCCCcch-----hhhhcccCC--CCC-CCh-hHHHHHHHHHHHHHhCCCCCCCEEEE
Q 002674 574 RGPTFDMDLSDFMD---------EGKPMSY-----EKAKKYFDT--NPS-QKW-AAYVAGTILVLMTELGVRFEDSISML 635 (894)
Q Consensus 574 ~~~~~~~~l~~~~~---------~~~~~~~-----~~~~~~~~~--~~~-~~W-~~yv~g~i~~~~~~~g~~~~~G~~i~ 635 (894)
.++++.+++.. ...+..+ +...+++.. .+. ..+ .+.+.+.+.-++.-. .. .++++.
T Consensus 60 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~flyl~~~~~--~~-~~~~i~ 133 (387)
T PLN02677 60 ---EFSWPLARIKEALPDLGTPCPSTPTSCSEETLKSIAALVEEQNIPEAKIWLSSGVSAFLWLYTSIL--GF-NPATVV 133 (387)
T ss_pred ---eEEechHhhhhhhccccccccccccccCHHHHHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHhc--cC-CCeEEE
Confidence 12222222110 0011111 001112211 010 011 011122222112111 12 479999
Q ss_pred EEeCCCCCCCCChHHHHHHHHHHHHHHHhCC-CC-------------CHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCC
Q 002674 636 VSSAVPEGKGVSSSASVEVASMSAIAAAHGL-NI-------------HPRDLALLCQKVENHIVGAPCGVMDQMASACGE 701 (894)
Q Consensus 636 i~s~iP~g~GLgSSAAl~va~~~al~~l~~~-~l-------------~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~ 701 (894)
|+|+||+|+|||||||++||++.|+..+++. ++ +.++++++|+.+|+.+||+|||+ |++++++||
T Consensus 134 I~S~lP~GaGLGSSAAv~Va~~~AL~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~A~~~E~~~hG~pSGi-D~a~s~~Gg 212 (387)
T PLN02677 134 VTSELPLGSGLGSSAAFCVALSAALLAASDSISVSTGGNGWSSLDETDLELVNKWAFEGEKIIHGKPSGI-DNTVSTYGN 212 (387)
T ss_pred EEccCCCCCCccHHHHHHHHHHHHHHHHhCCcccccccccccccChhHHHHHHHHHHHHHHHHhCCCCch-hHHHHhcCC
Confidence 9999999999999999999999999999983 22 23578899999999999999996 999999999
Q ss_pred CCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 702 ANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 702 ~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
+ +.++.... +.++.+.+++|+|+|||++|+|.
T Consensus 213 ---~--I~f~~~~~-~~l~~~~~l~llv~dTgv~~sT~ 244 (387)
T PLN02677 213 ---M--IKFKSGEL-TRLQSNMPLKMLITNTRVGRNTK 244 (387)
T ss_pred ---e--EEEcCCCc-eecCCCCCceEEEEECCCCCcHH
Confidence 3 44454444 57777778999999999999974
No 15
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.94 E-value=4.4e-25 Score=247.66 Aligned_cols=325 Identities=14% Similarity=0.151 Sum_probs=205.1
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHH
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASL 92 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l 92 (894)
|+++.| ..|...||+.|++++|++|+++||+|+|++..... ....+...++.+..+.. .++ .....+
T Consensus 1 ~~~i~~---~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~~-~~l--------~~~~~~ 67 (352)
T PRK12446 1 MKKIVF---TGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGI-EKTIIEKENIPYYSISS-GKL--------RRYFDL 67 (352)
T ss_pred CCeEEE---EcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcc-ccccCcccCCcEEEEec-cCc--------CCCchH
Confidence 565444 45555899999999999999999999999865432 12222211222222210 111 000011
Q ss_pred HHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHH
Q 002674 93 EKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW 169 (894)
Q Consensus 93 ~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~ 169 (894)
..+...+. ......+..+++++++||+||++. ..+++++|+.+++|++.+......- ...
T Consensus 68 ~~~~~~~~--~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g---------------~~n 130 (352)
T PRK12446 68 KNIKDPFL--VMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPG---------------LAN 130 (352)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCcc---------------HHH
Confidence 11221111 111234557789999999999875 3446889999999999885432110 001
Q ss_pred HHHhhccccceee-ecCCCC-CCC-CCCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhHHh-h
Q 002674 170 QIAEDYSHCEFLI-RLPGYC-PMP-AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEE-Y 243 (894)
Q Consensus 170 ~l~~~y~~~~~ll-~~p~~~-~~p-~~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~~~-L 243 (894)
++...+ ++.++ .++... .++ ....++++|+........+++.++.+++++++|+|+|++||+|.. .++... +
T Consensus 131 r~~~~~--a~~v~~~f~~~~~~~~~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l 208 (352)
T PRK12446 131 KIALRF--ASKIFVTFEEAAKHLPKEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREAL 208 (352)
T ss_pred HHHHHh--hCEEEEEccchhhhCCCCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHH
Confidence 111111 11111 111110 012 112345555543322233456667788888899999999999985 232222 1
Q ss_pred --CCCCcEE-EEeCCCCCC--C--CCCeEECCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC---Cc
Q 002674 244 --LPSGWKC-LVCGASDSQ--L--PPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF---NE 312 (894)
Q Consensus 244 --l~~~~~~-vv~G~~~~~--l--p~nv~v~g~~-~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~---~e 312 (894)
+..++.+ .+||.+..+ + ..++.+++|. ++|+++|++||++|||+|.+|++|++++|+|+|++|.+.. .+
T Consensus 209 ~~l~~~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~ 288 (352)
T PRK12446 209 PELLLKYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGD 288 (352)
T ss_pred HhhccCcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCch
Confidence 1234654 457875311 1 1456678887 6899999999999999999999999999999999997532 48
Q ss_pred hHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc------CCCCHHHHHHHHHHH
Q 002674 313 EPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE------GGINGGEVAAHILQE 369 (894)
Q Consensus 313 q~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~------~~~~g~~~~A~~i~~ 369 (894)
|..||+++++.|++..+..++++++.+.+++.++++++..+. ..+++++++++.+.+
T Consensus 289 Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 289 QILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred HHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 999999999999999999889998999999999987653332 456777776666643
No 16
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents the low GC Gram-positive organism forms of the ERG8 type of phosphomevalonate kinase.
Probab=99.94 E-value=5.5e-26 Score=254.59 Aligned_cols=198 Identities=20% Similarity=0.217 Sum_probs=149.0
Q ss_pred EEEcCccccccccccccC-CCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002674 499 VARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (894)
Q Consensus 499 ~~~APGRv~LiGEH~Dy~-gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (894)
.++|||||+|||||+||+ |.++|++||++++++.++++++..+++. |.+ +... .
T Consensus 2 ~~~APGKl~L~GEhavv~~G~pAl~~aI~~~~~v~i~~~~~~~~~i~---------------------s~~--~~~~--~ 56 (358)
T TIGR01220 2 VVHAPGKLFVAGEYAVVEPGNPAILVAVDRFVTVTVEDADGAADVII---------------------SSD--LGPQ--P 56 (358)
T ss_pred eeecceeEEEeeeEEEecCCCeEEEEEEcCcEEEEEEeCCCCceEEE---------------------ecC--CCCC--c
Confidence 578999999999999999 7789999999999999999887543332 221 1110 1
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHH---HhCCCCCCCEEEEEEeCCCCC----CCCChHH
Q 002674 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMT---ELGVRFEDSISMLVSSAVPEG----KGVSSSA 650 (894)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~---~~g~~~~~G~~i~i~s~iP~g----~GLgSSA 650 (894)
+.+..+. ..+. ........|.+|+++++..+.+ ..+... +||++.|.|++|.+ +||||||
T Consensus 57 ~~~~~~~-----~~~~-------~~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~-~g~~~~i~s~ip~~~g~k~GLGSSA 123 (358)
T TIGR01220 57 VGWRRHD-----GRLV-------VRDPDARSALAYVVSAIETVERYAGERNQKL-PALHLSVSSRLDEADGRKYGLGSSG 123 (358)
T ss_pred eEEEecC-----Ccee-------ecccccccchHHHHHHHHHHHHHHHhcCCCC-CceEEEEecCCCCcCCCCCCccHHH
Confidence 1111111 0000 0001124799999999876533 335544 59999999999995 6999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEE-ec------------------
Q 002674 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV-CQ------------------ 711 (894)
Q Consensus 651 Al~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~-~~------------------ 711 (894)
|++||++.|++.++|.++++++++++|+.+|+.++|.++|. |+++++|||. +++. +.
T Consensus 124 A~~Va~~~Al~~~~~~~l~~~~l~~lA~~~E~~~~g~~sg~-D~~a~~~GG~---i~~~~~~~~~~~~~~~~~~~~~~~~ 199 (358)
T TIGR01220 124 AVTVATVKALNAFYDLELSNDEIFKLAMLATAELQPKGSCG-DIAASTYGGW---IAYSTFDHDWVLQLARRVGVDRTLK 199 (358)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhhCCCCCcc-hhhhhhhCCE---EEEecCCHHHHhhhhhccchhhhhc
Confidence 99999999999999999999999999999999999998885 9999999994 3331 11
Q ss_pred ----CCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 712 ----PAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 712 ----~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
+..+ +++++|.+++|+|+|||++++|.
T Consensus 200 ~~w~~~~~-~~l~~~~~~~l~v~~tg~~~~T~ 230 (358)
T TIGR01220 200 APWPGLSI-RPLPAPKGLTLLIGWTGSPASTA 230 (358)
T ss_pred cCCCccce-eECCCCCCCEEEEEeCCCCcCcH
Confidence 1123 57777788999999999999864
No 17
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.94 E-value=3.6e-25 Score=253.66 Aligned_cols=325 Identities=18% Similarity=0.131 Sum_probs=191.4
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccc-----cCHHH
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-----VDRLA 90 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~-----~d~~~ 90 (894)
|+|+|+.. .+.||+.|+++||++|+++||+|+|++... ++..+...++.+.....+.......... .....
T Consensus 1 mrIl~~~~-p~~GHv~P~l~la~~L~~rGh~V~~~t~~~---~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T cd03784 1 MRVLITTI-GSRGDVQPLVALAWALRAAGHEVRVATPPE---FADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPG 76 (401)
T ss_pred CeEEEEeC-CCcchHHHHHHHHHHHHHCCCeEEEeeCHh---HHHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchH
Confidence 46766654 489999999999999999999999999763 2222222233333322111110000000 00011
Q ss_pred HHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECC-chhHHHHHHHhCCcEEEEecCchhHH----------HH-HHHh
Q 002674 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDFI----------YA-EYVM 158 (894)
Q Consensus 91 ~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~~~~----------~~-~~~~ 158 (894)
........+.......+++..+.++.++||+||+|. .+.+..+|+.+|||++.+....|... .. .+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T cd03784 77 LLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLYAL 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCCccchHHHHHHHH
Confidence 111111222223344555666777789999999995 77788899999999998854332110 00 0000
Q ss_pred -hhc---cchHHHHHHHHhhcccc---------ce-eeecCCCC--CCCCCC---ceeecCccccc-CccChHHHHHHhC
Q 002674 159 -AAG---HHHRSIVWQIAEDYSHC---------EF-LIRLPGYC--PMPAFR---DVIDVPLVVRR-LHKSRKEVRKELG 218 (894)
Q Consensus 159 -~~~---~~~~~i~~~l~~~y~~~---------~~-ll~~p~~~--~~p~~~---~v~~vp~~~~~-~~~~~~e~r~~lg 218 (894)
... .............+... +. +...+... ..+..+ ..++.+..... ......+++.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (401)
T cd03784 157 LEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLA 236 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccccCcEeCCCCCCCCCCCCCCHHHHHHHh
Confidence 000 00000111112222210 01 11111110 111111 11111211111 1122344555543
Q ss_pred CCCCCcEEEEEcCCCCCh--hhhH----HhhCCCCcEEE-EeCCCCC---CCCCCeEECCCCCCHHHHHhhcCEEEecCC
Q 002674 219 IEDDVKLLILNFGGQPAG--WKLK----EEYLPSGWKCL-VCGASDS---QLPPNFIKLPKDAYTPDFMAASDCMLGKIG 288 (894)
Q Consensus 219 l~~~~p~Vlvs~Gs~~~~--~~l~----~~Ll~~~~~~v-v~G~~~~---~lp~nv~v~g~~~~vp~ll~~~d~~I~~~G 288 (894)
+++|+|||++||.+.. ..+. +.+...+++++ .+|.... .+++|+++.+|++ +..+|++||+||+|||
T Consensus 237 --~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p-~~~ll~~~d~~I~hgG 313 (401)
T cd03784 237 --AGRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVP-HDWLLPRCAAVVHHGG 313 (401)
T ss_pred --CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCC-HHHHhhhhheeeecCC
Confidence 4678999999998652 2232 23333455554 4565432 3678999998865 5689999999999999
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 289 ~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
+||++|++++|+|+|++| .+.||+.||+++++.|+|+.+...+++++.+.+++++++++
T Consensus 314 ~~t~~eal~~GvP~v~~P--~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 314 AGTTAAALRAGVPQLVVP--FFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred chhHHHHHHcCCCEEeeC--CCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 999999999999999999 56799999999999999999988778888999999999864
No 18
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
Probab=99.93 E-value=1.1e-25 Score=271.10 Aligned_cols=200 Identities=19% Similarity=0.216 Sum_probs=146.6
Q ss_pred ceEEEEcCccccccccccc------cCCCeeeccccccc----eEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEE
Q 002674 496 EIFVARAPGRLDVMGGIAD------YSGSLVLQMPIREA----CHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIV 565 (894)
Q Consensus 496 ~~~~~~APGRv~LiGEH~D------y~gg~vl~~AI~~~----~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~ 565 (894)
.+.+++|||||||+||||| |+||.|+|+||++. +++.++++++.++++++.+
T Consensus 608 ~~~~~~aPgRVnLiGghTDtPpy~~ynGG~VLn~AId~~g~~pi~v~v~~~~d~~irl~S~d------------------ 669 (974)
T PRK13412 608 QIVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLAIELNGQPPLQVYVKPCSEPHIVLRSID------------------ 669 (974)
T ss_pred cEEEEeCceEEeecccCcCCCcccCcCCcEEEEEEEeCCCCccEEEEEEECCCCeEEEEECC------------------
Confidence 4556699999999999999 99999999999996 9999999988776654321
Q ss_pred ecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHH-------------HHHHhCCCCCCCE
Q 002674 566 SYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-------------LMTELGVRFEDSI 632 (894)
Q Consensus 566 s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~-------------~~~~~g~~~~~G~ 632 (894)
+... ..++ +.+++. ......+|.+|++|++.. .+++.......|+
T Consensus 670 -----~~~~-~~v~-~~~~l~---------------~~~~~~~~~~~~K~al~~~G~~~~~~~~~~~~l~e~l~~~G~G~ 727 (974)
T PRK13412 670 -----LGAM-EVVR-TNEELR---------------DYKKVGSPFSIPKAALCLAGFAPRFSAESYASLEEQLKAFGSGI 727 (974)
T ss_pred -----CCCc-eEEe-cchhhc---------------ccccccchHhhhhhhheecccccccccchhHHHHHHHHhcCCCe
Confidence 1111 0011 111110 012235799999998741 1111111122599
Q ss_pred EEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecC
Q 002674 633 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQP 712 (894)
Q Consensus 633 ~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~ 712 (894)
++.|.|+||+|+|||||||++||++.|++++++.++++++++++|+.+|+.++|.+ |+|||+++++||. +++++.+
T Consensus 728 ~I~i~s~IP~GsGLGSSAAlavA~l~AL~~~~g~~ls~~ela~~A~~~E~~lhg~~-g~qDq~~a~~GG~---~~i~~~~ 803 (974)
T PRK13412 728 EITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGG-GWQDQYGGVLPGV---KLLQTGA 803 (974)
T ss_pred EEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHCCCC-chhhhhhHhcCCe---EEEEecC
Confidence 99999999999999999999999999999999999999999999999998876555 5599999999994 5666654
Q ss_pred C-c---eeEEeecCC------CeEEEEEeCCCCcccC
Q 002674 713 A-E---LLGVVEIPS------HIRFWGIDSGIRHSVG 739 (894)
Q Consensus 713 ~-~---~~~~v~~p~------~~~~vv~~sgv~~~~~ 739 (894)
. . ..++++.+. +-+++|+|||++|++.
T Consensus 804 ~~~~~~~v~~L~~~~~~~~eLe~~LlL~yTGitR~T~ 840 (974)
T PRK13412 804 GFAQSPLVRWLPDSLFTQPEYRDCHLLYYTGITRTAK 840 (974)
T ss_pred CcccCcceeecCcchhhhhhccCcEEEEECCCeeeHH
Confidence 2 1 112333321 3479999999999874
No 19
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism]
Probab=99.93 E-value=1.1e-25 Score=235.88 Aligned_cols=207 Identities=22% Similarity=0.297 Sum_probs=139.5
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002674 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (894)
..++|||||+|+|||+++||.+++++||++|+|+.+++..++++.+. +|++.+.
T Consensus 5 l~vsaPGKvILfGEHAVVyg~~AlAaai~LrTyl~l~~san~~i~l~--------------l~di~~~------------ 58 (397)
T KOG1511|consen 5 LLVSAPGKVILFGEHAVVYGRTALAAAIDLRTYLRLQTSANDRILLQ--------------LPDISIE------------ 58 (397)
T ss_pred eeecCCccEEEeccceeEECCceeEEEeecceeEEEEecCCCeEEEe--------------cccCCce------------
Confidence 47899999999999999999999999999999999998877665443 4444432
Q ss_pred eeccCCcccc-----------CCCCcc---hhhhhc---ccCCCCCCChhHHHHHHHHHHHHHhCCCCCCC----EEEEE
Q 002674 578 FDMDLSDFMD-----------EGKPMS---YEKAKK---YFDTNPSQKWAAYVAGTILVLMTELGVRFEDS----ISMLV 636 (894)
Q Consensus 578 ~~~~l~~~~~-----------~~~~~~---~~~~~~---~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G----~~i~i 636 (894)
+.|++.++.. ...|.+ .+..++ .........-.--+.+.+.-++ -.-.+. +| +++.+
T Consensus 59 ~~w~l~~~~~~l~~~~~~~~~~q~p~~~~~~e~~k~l~~l~~~~~~~~~~~a~~~~lYlf~-~l~~~~-~g~lp~~~v~v 136 (397)
T KOG1511|consen 59 KAWSLADFNGALPEQRSTYESVQTPASEVRVELLKQLGGLLENQEKVKEHLAGLSFLYLFL-GLCLRA-PGTLPALTVVV 136 (397)
T ss_pred EEEEhhhhhhhhhhhhhhhhccCCcchhhhHHHHHHhhhhhhcchhhhHHHHHHHHHHHHH-Hhhhcc-cCCCcceEEEE
Confidence 2333332110 011110 111111 0111111100111122221111 111111 34 89999
Q ss_pred EeCCCCCCCCChHHHHHHHHHHHHHHHhCCC--------CCHH---HHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeE
Q 002674 637 SSAVPEGKGVSSSASVEVASMSAIAAAHGLN--------IHPR---DLALLCQKVENHIVGAPCGVMDQMASACGEANKL 705 (894)
Q Consensus 637 ~s~iP~g~GLgSSAAl~va~~~al~~l~~~~--------l~~~---~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~ 705 (894)
+|++|+|+|||||||+.||++++++.++|.- +++. -+.+||++.|+.+||+|||+ |+++|+|||.
T Consensus 137 ~SelP~GaGLGSSAa~sv~lAtall~~~g~i~~p~~~~~~~e~~l~Li~~WAf~gE~~iHGtpSGi-DnaV~t~Gg~--- 212 (397)
T KOG1511|consen 137 DSELPLGAGLGSSAAISVALATALLRLAGLIPPPGSNLSLAENDLALINKWAFEGEKCIHGTPSGI-DNAVCTYGGL--- 212 (397)
T ss_pred eccCCCcCCcchhHHHHHHHHHHHHHHcccCCCCcchhccccchHHHHHHHHhccceeecCCCccc-chhhhccCce---
Confidence 9999999999999999999999999998862 2223 34589999999999999996 9999999993
Q ss_pred EEEEecCC-ceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 706 LAMVCQPA-ELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 706 ~~~~~~~~-~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
+.|++. ++ +.+...+.++++++||.++|++.
T Consensus 213 --i~f~kg~~~-~~Lk~~~~L~illtnTrv~RnTk 244 (397)
T KOG1511|consen 213 --ISFKKGVEI-ESLKHLPPLRILLTNTRVPRNTK 244 (397)
T ss_pred --EEeecCccc-eecccCCCceEEEEccccCccHH
Confidence 345444 44 56666678999999999999985
No 20
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.93 E-value=6.4e-24 Score=236.05 Aligned_cols=307 Identities=17% Similarity=0.156 Sum_probs=183.1
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCcee-Eeee-ccCCCcccccccccCHHHHHHH
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLF-IRKV-LLDCGAVQADALTVDRLASLEK 94 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~-~~~~-~~d~g~~~~~~~~~d~~~~l~~ 94 (894)
+|+|+++|+|+||++|+++|+++|++ ||+|+|++.... ...+....+. +... +.. ....+. .++...++..
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~---~~~~~~~~~~~~~~~p~~~--~~~~~~-~~~~~~~l~~ 73 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRS---KNYISKYGFKVFETFPGIK--LKGEDG-KVNIVKTLRN 73 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCH---HHhhhhhcCcceeccCCce--EeecCC-cCcHHHHHHh
Confidence 57889999999999999999999999 999999986541 1111100110 1110 001 011111 1333333332
Q ss_pred HHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHH-Hh
Q 002674 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AE 173 (894)
Q Consensus 95 ~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l-~~ 173 (894)
...+ . ...+.++.+++++++||+||+|+.+.+.++|+.+|||++.+.+.. ...+.... .....+...+ ..
T Consensus 74 ~~~~---~-~~~~~~~~~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i~~q~-~~~~~~~~----~~~~~~~~~~~~~ 144 (321)
T TIGR00661 74 KEYS---P-KKAIRREINIIREYNPDLIISDFEYSTVVAAKLLKIPVICISNQN-YTRYPLKT----DLIVYPTMAALRI 144 (321)
T ss_pred hccc---c-HHHHHHHHHHHHhcCCCEEEECCchHHHHHHHhcCCCEEEEecch-hhcCCccc----chhHHHHHHHHHH
Confidence 2121 1 124566788999999999999999999999999999999887632 11111000 0011111111 12
Q ss_pred hccccceeeecCCCCCCCCCCceeecCcccccC-ccChHHHHHHhCCCCCCcEEEEEcCCCCChhhhHHhhCC-CCcEEE
Q 002674 174 DYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRL-HKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCL 251 (894)
Q Consensus 174 ~y~~~~~ll~~p~~~~~p~~~~v~~vp~~~~~~-~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~~l~~~Ll~-~~~~~v 251 (894)
.+..++.+...++....+..+.. ....+ ...+.+..+. .+.+.+.|++++|+.+.. .+++.+.. +.+.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~--~~~~~~~iLv~~g~~~~~-~l~~~l~~~~~~~~i 216 (321)
T TIGR00661 145 FNERCERFIVPDYPFPYTICPKI-----IKNMEGPLIRYDVDDV--DNYGEDYILVYIGFEYRY-KILELLGKIANVKFV 216 (321)
T ss_pred hccccceEeeecCCCCCCCCccc-----cccCCCcccchhhhcc--ccCCCCcEEEECCcCCHH-HHHHHHHhCCCeEEE
Confidence 22223332211111111111111 00000 1111122111 123567899998876654 45555432 344444
Q ss_pred EeCCCC--CCCCCCeEECCCCC-CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEE
Q 002674 252 VCGASD--SQLPPNFIKLPKDA-YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE 328 (894)
Q Consensus 252 v~G~~~--~~lp~nv~v~g~~~-~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~ 328 (894)
+.+... ..+++|+.+.+|.. +++++|+.||++|||+|++|++|++++|+|+|++|.....||..||+.+++.|+|+.
T Consensus 217 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~ 296 (321)
T TIGR00661 217 CYSYEVAKNSYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIA 296 (321)
T ss_pred EeCCCCCccccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEE
Confidence 322221 12678999888874 788999999999999999999999999999999998777799999999999999999
Q ss_pred EccCCCCcccHHHHHHHHHhcC
Q 002674 329 MIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 329 ~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
++..++ .+.+++.+.++++
T Consensus 297 l~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 297 LEYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred cChhhH---HHHHHHHhccccc
Confidence 987776 3333444444443
No 21
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.92 E-value=8e-27 Score=275.15 Aligned_cols=197 Identities=19% Similarity=0.233 Sum_probs=108.9
Q ss_pred CceeecCccc-ccCccChHHHHHHhCCCCCCcEEEEEcCCCCC--hhh----hHHhhCCCCcEEEEe-CCCCC-CCCCCe
Q 002674 194 RDVIDVPLVV-RRLHKSRKEVRKELGIEDDVKLLILNFGGQPA--GWK----LKEEYLPSGWKCLVC-GASDS-QLPPNF 264 (894)
Q Consensus 194 ~~v~~vp~~~-~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~--~~~----l~~~Ll~~~~~~vv~-G~~~~-~lp~nv 264 (894)
++++.+|++. +.+...+++++.++....++++|||||||... +.+ +.+++...+.++++. ..... .+|+|+
T Consensus 246 p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~l~~n~ 325 (500)
T PF00201_consen 246 PNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPENLPKNV 325 (500)
T ss_dssp CTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGCHHHTTE
T ss_pred hcccccCccccccccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccccccceE
Confidence 4555666642 33445667788777643477899999999764 223 333443444455553 32222 278999
Q ss_pred EECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHH
Q 002674 265 IKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWK 340 (894)
Q Consensus 265 ~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~ 340 (894)
.+. +|+| ++|++ +++||||||+||++||+++|||+|++| .++||+.||+++++.|+|+.++..+++.+++.
T Consensus 326 ~~~---~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P--~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 400 (500)
T PF00201_consen 326 LIV---KWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIP--LFGDQPRNAARVEEKGVGVVLDKNDLTEEELR 400 (500)
T ss_dssp EEE---SS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-G--CSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHH
T ss_pred EEe---ccccchhhhhcccceeeeeccccchhhhhhhccCCccCCC--CcccCCccceEEEEEeeEEEEEecCCcHHHHH
Confidence 877 5888 89975 789999999999999999999999999 78999999999999999999999999999999
Q ss_pred HHHHHHHhcCCC----------ccCCCCHHHHHHHHHHHHHccCcccCCCCchhhhhHHHHHhccccccCCCcccCcccc
Q 002674 341 PYLERAISLKPC----------YEGGINGGEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGRDVSIPEW 410 (894)
Q Consensus 341 ~~l~~ll~~~~~----------~~~~~~g~~~~A~~i~~~l~~~~~~~~~~~ga~~L~~a~~~~~~~q~~~~~~~~~p~~ 410 (894)
++|+++++++.. +++++..+.+.|.+|.|+ +.|+.|++||| +++.+++ |
T Consensus 401 ~ai~~vl~~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~-------v~~~~~~~~l~-----------~~~~~l~---~ 459 (500)
T PF00201_consen 401 AAIREVLENPSYKENAKRLSSLFRDRPISPLERAVWWIEY-------VARHGGAPHLR-----------SPARDLS---F 459 (500)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHTTT--------------------------------------------------------
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-------HHhcCCCcccC-----------ChhhcCC---H
Confidence 999999988731 227889999999999999 88999999999 9999999 8
Q ss_pred cccccc
Q 002674 411 YQTAED 416 (894)
Q Consensus 411 ~~~~~~ 416 (894)
|||+..
T Consensus 460 ~~~~~l 465 (500)
T PF00201_consen 460 YQYYLL 465 (500)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 888866
No 22
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=7.3e-23 Score=227.51 Aligned_cols=317 Identities=19% Similarity=0.170 Sum_probs=199.5
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCe-EEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhh
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHD-VHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAV 100 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~-Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~ 100 (894)
..|.+.||+.|+++++++|.++|++ |.++..... ............++.+ +.+..... ..+..+...+.
T Consensus 6 ~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~-~e~~l~~~~~~~~~~I--~~~~~~~~-------~~~~~~~~~~~ 75 (357)
T COG0707 6 TAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDG-LEAFLVKQYGIEFELI--PSGGLRRK-------GSLKLLKAPFK 75 (357)
T ss_pred EeCCCccchhHHHHHHHHHHhhCccEEEEeccccc-ceeeeccccCceEEEE--eccccccc-------CcHHHHHHHHH
Confidence 4455689999999999999999995 666643321 1111111122333332 22211100 01111111110
Q ss_pred cchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEE-ecCchhHHHHHHHhhhccchHHHHHHHHhhcc
Q 002674 101 APRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (894)
Q Consensus 101 ~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~i-sn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~ 176 (894)
.+. .+.+..++|++++||+|++.. ..++.++|..++||++.+ +|+..... +.+...+
T Consensus 76 -~~~-~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a----------------nk~~~~~- 136 (357)
T COG0707 76 -LLK-GVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA----------------NKILSKF- 136 (357)
T ss_pred -HHH-HHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh----------------HHHhHHh-
Confidence 111 235668899999999999864 556788999999999988 45431111 1111111
Q ss_pred ccceee-ecCC--CCCCCCCCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhHHhh---CCCCc
Q 002674 177 HCEFLI-RLPG--YCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---LPSGW 248 (894)
Q Consensus 177 ~~~~ll-~~p~--~~~~p~~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~~~L---l~~~~ 248 (894)
++.+. ..+. ...-+....++++|+..........+++.... .++++|+|+.||+|+. .++.... +..++
T Consensus 137 -a~~V~~~f~~~~~~~~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~--~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~~~ 213 (357)
T COG0707 137 -AKKVASAFPKLEAGVKPENVVVTGIPVRPEFEELPAAEVRKDGR--LDKKTILVTGGSQGAKALNDLVPEALAKLANRI 213 (357)
T ss_pred -hceeeeccccccccCCCCceEEecCcccHHhhccchhhhhhhcc--CCCcEEEEECCcchhHHHHHHHHHHHHHhhhCe
Confidence 11111 0110 00001112345565543222211223333322 2789999999999996 2333222 22245
Q ss_pred EEE-EeCCCCC-C----C-CCC-eEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC--CchHHHHH
Q 002674 249 KCL-VCGASDS-Q----L-PPN-FIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF--NEEPFLRN 318 (894)
Q Consensus 249 ~~v-v~G~~~~-~----l-p~n-v~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~--~eq~~na~ 318 (894)
.++ .+|.+.. . . ..+ +++.+|.++|+++|+++|++||++|.+|+.|++++|+|+|++|.+.. ++|..||+
T Consensus 214 ~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 214 QVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAK 293 (357)
T ss_pred EEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHH
Confidence 544 4687641 1 1 123 88999999999999999999999999999999999999999998755 58888999
Q ss_pred HHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc---------CCCCHHHHHHHHHHHH
Q 002674 319 MLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQET 370 (894)
Q Consensus 319 ~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~---------~~~~g~~~~A~~i~~~ 370 (894)
.+++.|+|..+...+++++.+.+.|.++++++..+. ..++.++++++.++..
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLAL 354 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999997653321 6788888888887765
No 23
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.91 E-value=8.4e-23 Score=233.52 Aligned_cols=336 Identities=15% Similarity=0.127 Sum_probs=195.9
Q ss_pred CCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcch
Q 002674 24 GHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPR 103 (894)
Q Consensus 24 ~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~ 103 (894)
.++.||++|+++||++|+++||+|+|++... +.+.+...++.+.................. .....+...+....
T Consensus 3 ~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~---~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 77 (392)
T TIGR01426 3 IPAHGHVNPTLGVVEELVARGHRVTYATTEE---FAERVEAAGAEFVLYGSALPPPDNPPENTE--EEPIDIIEKLLDEA 77 (392)
T ss_pred CCccccccccHHHHHHHHhCCCeEEEEeCHH---HHHHHHHcCCEEEecCCcCccccccccccC--cchHHHHHHHHHHH
Confidence 4568999999999999999999999999753 233332223333332211110000000000 01111111111122
Q ss_pred HHhHHHHHHHHhcCCCcEEEECC-chhHHHHHHHhCCcEEEEecCchhH-HHH--------HHHhh---hccchHHH---
Q 002674 104 KSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF-IYA--------EYVMA---AGHHHRSI--- 167 (894)
Q Consensus 104 ~~ll~~~~~~L~~~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~~~-~~~--------~~~~~---~~~~~~~i--- 167 (894)
..++....+.++.++||+||.|. .+++..+|+.+|||+|.++...... .+. ..... .......+
T Consensus 78 ~~~~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (392)
T TIGR01426 78 EDVLPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEYVAR 157 (392)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccccccccccccchhhhhhhccccchhHHHHHH
Confidence 23344456677888999999997 6788899999999999874321100 000 00000 00000111
Q ss_pred HHHHHhhccc----cce---------eeecCCCC-C-CCCC-CceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcC
Q 002674 168 VWQIAEDYSH----CEF---------LIRLPGYC-P-MPAF-RDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFG 231 (894)
Q Consensus 168 ~~~l~~~y~~----~~~---------ll~~p~~~-~-~p~~-~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~G 231 (894)
.+.++..+.. ... +...+... + .+.+ .++..+|+....+. +...+....+++++||+++|
T Consensus 158 ~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~----~~~~~~~~~~~~~~v~vs~G 233 (392)
T TIGR01426 158 LSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRK----EDGSWERPGDGRPVVLISLG 233 (392)
T ss_pred HHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCCCcc----ccCCCCCCCCCCCEEEEecC
Confidence 1111221210 000 11111110 0 0112 23455555322111 11113333457889999999
Q ss_pred CCCCh-hh----hHHhhCCCCcEEE-EeCCCCC-----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCC
Q 002674 232 GQPAG-WK----LKEEYLPSGWKCL-VCGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKL 300 (894)
Q Consensus 232 s~~~~-~~----l~~~Ll~~~~~~v-v~G~~~~-----~lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~ 300 (894)
+.... .. +++.+...+++++ .+|.+.. .+++|+.+.+|++. .++|++||+||+|||++|++|++++|+
T Consensus 234 s~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~-~~ll~~~~~~I~hgG~~t~~Eal~~G~ 312 (392)
T TIGR01426 234 TVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQ-LEILKKADAFITHGGMNSTMEALFNGV 312 (392)
T ss_pred ccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCH-HHHHhhCCEEEECCCchHHHHHHHhCC
Confidence 96432 12 3334545565544 4565421 26789998887653 489999999999999999999999999
Q ss_pred cEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc---------CCCCHHHHHHHHHHHHH
Q 002674 301 PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (894)
Q Consensus 301 P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l 371 (894)
|+|++| ...||..|++++++.|+|+.+...+++++++.++|+++++++.... ...+|++++|+.|++++
T Consensus 313 P~v~~p--~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 313 PMVAVP--QGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred CEEecC--CcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 999999 4579999999999999999999888888999999999997753110 24556667777666653
No 24
>PRK03926 mevalonate kinase; Provisional
Probab=99.91 E-value=2.1e-23 Score=229.82 Aligned_cols=172 Identities=24% Similarity=0.289 Sum_probs=139.2
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 002674 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (894)
+.++|||||||+|||+||+||.+|++||++++++.+++++++ +.+.+.
T Consensus 2 ~~~~aPgkv~L~Geh~~~~g~~~l~~aI~~~~~v~i~~~~~~----------------------~~i~~~---------- 49 (302)
T PRK03926 2 VLCSAPGKIYLFGEHAVVYGKPAIACAIDLRTYVRAEFNDDS----------------------IYIESD---------- 49 (302)
T ss_pred eEEeeeeEEEEEecceeecCCeEEEEEecceEEEEEEECCCc----------------------eEEecc----------
Confidence 578999999999999999999999999999999999876432 111100
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHH
Q 002674 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (894)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~ 657 (894)
+ .+ ...|.+|+..++..+.+..+ . +|+++.+.++||+|+|||||||+++|++
T Consensus 50 ~----~~---------------------~~~~~~~~~~~~~~~~~~~~--~-~g~~i~i~~~iP~~~GLGSSsA~~~a~~ 101 (302)
T PRK03926 50 Y----GK---------------------TGEKHPYVSAAIEKMREEAD--K-DGVTVSITSQIPVGSGLGSSAAVTVATI 101 (302)
T ss_pred c----cc---------------------ccchhHHHHHHHHHHHHhcC--C-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 0 00 11477788888877665544 2 4999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcc
Q 002674 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHS 737 (894)
Q Consensus 658 ~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~ 737 (894)
.|++.+++.++++++++++|+++|+.++|.+|| +|++++++||. ++.... .++++ +++.+++++|+.+++
T Consensus 102 ~al~~~~~~~l~~~~l~~la~~~E~~~~G~~sg-~D~~~~~~Gg~---~~~~~~-----~~l~~-~~~~~vl~~~~~~~s 171 (302)
T PRK03926 102 GALNRLLGLGLSLEEIAKLGHKVELLVQGAASP-TDTYVSTMGGF---VTIPDR-----KKLPF-PECGIVVGYTGSSGS 171 (302)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCch-HHHHHHhcCCe---EEEcCC-----CcCCC-CCceEEEEECCCCCc
Confidence 999999999999999999999999999999999 59999999983 333211 13343 478899999999988
Q ss_pred cC
Q 002674 738 VG 739 (894)
Q Consensus 738 ~~ 739 (894)
|.
T Consensus 172 T~ 173 (302)
T PRK03926 172 TK 173 (302)
T ss_pred HH
Confidence 74
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.90 E-value=4.8e-23 Score=234.44 Aligned_cols=342 Identities=17% Similarity=0.187 Sum_probs=200.9
Q ss_pred eEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHH-
Q 002674 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLE- 93 (894)
Q Consensus 15 ~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~- 93 (894)
+|+|+|+..+. .||+.|+++|+++|.++||+|+|+|... +...+..-+..+..........+......+...++.
T Consensus 1 ~mkil~~~~~~-~Ghv~p~~aL~~eL~~~gheV~~~~~~~---~~~~ve~ag~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (406)
T COG1819 1 RMKILFVVCGA-YGHVNPCLALGKELRRRGHEVVFASTGK---FKEFVEAAGLAFVAYPIRDSELATEDGKFAGVKSFRR 76 (406)
T ss_pred CceEEEEeccc-cccccchHHHHHHHHhcCCeEEEEeCHH---HHHHHHHhCcceeeccccCChhhhhhhhhhccchhHH
Confidence 36788888777 9999999999999999999999999754 222222112112111110000000000011111111
Q ss_pred HHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCchh----------HH---------HH
Q 002674 94 KYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWD----------FI---------YA 154 (894)
Q Consensus 94 ~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~----------~~---------~~ 154 (894)
.+. .......+..+.+.+..||+|+.|...+..++++..++|.+...+..|. .. +.
T Consensus 77 ~~~-----~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (406)
T COG1819 77 LLQ-----QFKKLIRELLELLRELEPDLVVDDARLSLGLAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKLPIPLY 151 (406)
T ss_pred Hhh-----hhhhhhHHHHHHHHhcchhhhhcchhhhhhhhhhhcccchhhhhhhhccCCcccccCccccccccccccccc
Confidence 111 1223345667889999999999998665557888888887654221110 00 00
Q ss_pred HHHhhh-ccc-hHHH-HHHHHhhcccc-c-------eeeecCCCC--------CCC--CCCc-eeecCcccccCccChHH
Q 002674 155 EYVMAA-GHH-HRSI-VWQIAEDYSHC-E-------FLIRLPGYC--------PMP--AFRD-VIDVPLVVRRLHKSRKE 212 (894)
Q Consensus 155 ~~~~~~-~~~-~~~i-~~~l~~~y~~~-~-------~ll~~p~~~--------~~p--~~~~-v~~vp~~~~~~~~~~~e 212 (894)
...... ... .... .......+... . ..+..++.. +.| .++. ...+|+....+ ..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~ 228 (406)
T COG1819 152 PLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEA---ANE 228 (406)
T ss_pred ccChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCccccccccc---ccc
Confidence 000000 000 0000 00000000000 0 000000000 000 0010 01112111110 011
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCChhhh----HHhhCCCCcEEEEe-CCCCC---CCCCCeEECCCCCCHHHHHhhcCEEE
Q 002674 213 VRKELGIEDDVKLLILNFGGQPAGWKL----KEEYLPSGWKCLVC-GASDS---QLPPNFIKLPKDAYTPDFMAASDCML 284 (894)
Q Consensus 213 ~r~~lgl~~~~p~Vlvs~Gs~~~~~~l----~~~Ll~~~~~~vv~-G~~~~---~lp~nv~v~g~~~~vp~ll~~~d~~I 284 (894)
...+ +..++|+||+++||.+...++ .+++.+.++++++. |.... .+|.|+.+.++++ ...++++||+||
T Consensus 229 ~~~~--~~~d~~~vyvslGt~~~~~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p-~~~~l~~ad~vI 305 (406)
T COG1819 229 LPYW--IPADRPIVYVSLGTVGNAVELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVP-QLELLPRADAVI 305 (406)
T ss_pred Ccch--hcCCCCeEEEEcCCcccHHHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCC-HHHHhhhcCEEE
Confidence 1111 456899999999998853233 33455677777765 44222 2789999987554 247899999999
Q ss_pred ecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc---------C
Q 002674 285 GKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------G 355 (894)
Q Consensus 285 ~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~---------~ 355 (894)
||||.||++|++++|||+|++| ...||+.||+++++.|+|+.+..+.++++.++++|+++|+++...+ .
T Consensus 306 ~hGG~gtt~eaL~~gvP~vv~P--~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~ 383 (406)
T COG1819 306 HHGGAGTTSEALYAGVPLVVIP--DGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEFK 383 (406)
T ss_pred ecCCcchHHHHHHcCCCEEEec--CCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 5689999999999999999999999999999999999998763211 5
Q ss_pred CCCHHHHHHHHHHHHHcc
Q 002674 356 GINGGEVAAHILQETAIG 373 (894)
Q Consensus 356 ~~~g~~~~A~~i~~~l~~ 373 (894)
..+|..++|+.|++....
T Consensus 384 ~~~g~~~~a~~le~~~~~ 401 (406)
T COG1819 384 EEDGPAKAADLLEEFARE 401 (406)
T ss_pred hcccHHHHHHHHHHHHhc
Confidence 677788899999987544
No 26
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism]
Probab=99.90 E-value=1.7e-23 Score=225.11 Aligned_cols=184 Identities=26% Similarity=0.330 Sum_probs=142.9
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 002674 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (894)
Q Consensus 499 ~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (894)
.++|||+|.|+|||++++|.+++++||+.++++.++.+++.++. +.+. ++.
T Consensus 2 ~~~aPgKliL~GEHAVVyG~pAI~~aI~~~~~v~~~~s~~~~~~---------------------i~~~--~~~------ 52 (307)
T COG1577 2 SVSAPGKLILFGEHAVVYGYPAIAAAIDLRVTVTISESDSNKIV---------------------IESS--DLK------ 52 (307)
T ss_pred cccccccEEEEecceeeeCCchhheeeeeeEEEEEEecCCCcEE---------------------Eecc--CCC------
Confidence 47899999999999999999999999999999999988764432 2221 010
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHH
Q 002674 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (894)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~ 658 (894)
-+ . +.. +.. ..|+..++..+.+..+.....||++.|.|+||+|+|||||||+.||++.
T Consensus 53 -~~--~-------~~~---------~~~---~~~~~~~v~~~~e~~~~~~~~~~~l~I~S~iP~g~GLGSSAAVsva~i~ 110 (307)
T COG1577 53 -SS--T-------LER---------DED---EGYIQAAVRLASELLNQSSLKPFSLEIDSEIPIGAGLGSSAAVSVAVIK 110 (307)
T ss_pred -Cc--c-------ccc---------ccc---chHHHHHHHHHHHHhcccCCCCeEEEEecCCCCCCCccHHHHHHHHHHH
Confidence 00 0 000 010 2677777766544444222269999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 659 al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
|++.++|..++++++++++.++|..+||.+|| +|.+++++|| ++++..+ ... +.+.++..-.|+|.|||+++++
T Consensus 111 al~~~~g~~ls~~~l~~la~~~e~~vqG~~Sg-~D~a~~~~gg---~v~~~~~-~~~-~~l~~~~~~~~~I~~tg~~~sT 184 (307)
T COG1577 111 ALSAYFGVELSPEELAKLANKVELIVQGKASG-IDIATITYGG---LVAFKKG-FDF-EKLEIELLGTLVIGDTGVPGST 184 (307)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHcCCCCc-ccceEEEeCC---EEEEecC-CCc-cccccccCCeEEEEEcCCcCcH
Confidence 99999999999999999999999999999999 5999999999 4555432 223 4566553338999999999988
Q ss_pred C
Q 002674 739 G 739 (894)
Q Consensus 739 ~ 739 (894)
.
T Consensus 185 ~ 185 (307)
T COG1577 185 K 185 (307)
T ss_pred H
Confidence 5
No 27
>PLN02208 glycosyltransferase family protein
Probab=99.90 E-value=3.4e-21 Score=221.04 Aligned_cols=336 Identities=12% Similarity=0.117 Sum_probs=201.2
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccC-----CCceeEeeeccC--CCcccccccccCHHHHHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-----SPRLFIRKVLLD--CGAVQADALTVDRLASLEK 94 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~-----~p~~~~~~~~~d--~g~~~~~~~~~d~~~~l~~ 94 (894)
++.++.||++|++.+|+.|..+|++|||+++... ...+. .+.+.+.....+ .|+........+... .
T Consensus 10 ~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~---~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~---~ 83 (442)
T PLN02208 10 FPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKA---QKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIPI---S 83 (442)
T ss_pred ecCccccHHHHHHHHHHHHHhCCCEEEEEeccch---hhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchhH---H
Confidence 5789999999999999999999999999985431 11111 012223322111 122111000001111 1
Q ss_pred HHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCc-hhHHHHHH--------Hhhhcc---
Q 002674 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFS-WDFIYAEY--------VMAAGH--- 162 (894)
Q Consensus 95 ~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~-~~~~~~~~--------~~~~~~--- 162 (894)
...++......+.....+++++.+||+||+|+.+|+..+|+.+|||.+.+...+ ....+..+ ++..+.
T Consensus 84 l~~~~~~~~~~~~~~l~~~L~~~~~~cVV~D~~~wa~~vA~e~giP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp~~~~ 163 (442)
T PLN02208 84 MDNLLSEALDLTRDQVEAAVRALRPDLIFFDFAQWIPEMAKEHMIKSVSYIIVSATTIAHTHVPGGKLGVPPPGYPSSKV 163 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEEECCcHhHHHHHHHhCCCEEEEEhhhHHHHHHHccCccccCCCCCCCCCccc
Confidence 111111122333344566777789999999988888999999999998763221 00001000 000000
Q ss_pred ---------------chHHHHHHHHhhccccceeeecCCCCC---------CCCCCceeecCcccc-cC--ccChHHHHH
Q 002674 163 ---------------HHRSIVWQIAEDYSHCEFLIRLPGYCP---------MPAFRDVIDVPLVVR-RL--HKSRKEVRK 215 (894)
Q Consensus 163 ---------------~~~~i~~~l~~~y~~~~~ll~~p~~~~---------~p~~~~v~~vp~~~~-~~--~~~~~e~r~ 215 (894)
.+..+..++...+..++.++..++... .+..+++..||+... .. ...++++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~ 243 (442)
T PLN02208 164 LFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSH 243 (442)
T ss_pred ccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHH
Confidence 011111112122333444433332210 111256888888643 21 223567888
Q ss_pred HhCCCCCCcEEEEEcCCCCC-h-hhhHH---hh--CCCCcEEEEeCC-C--C--CCCC---------CCeEECCCCCCHH
Q 002674 216 ELGIEDDVKLLILNFGGQPA-G-WKLKE---EY--LPSGWKCLVCGA-S--D--SQLP---------PNFIKLPKDAYTP 274 (894)
Q Consensus 216 ~lgl~~~~p~Vlvs~Gs~~~-~-~~l~~---~L--l~~~~~~vv~G~-~--~--~~lp---------~nv~v~g~~~~vp 274 (894)
||+-.+++++|||||||... . .++.+ .+ ...++.+++.-. . . ..+| .|+.+. .|+|
T Consensus 244 wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~---~W~P 320 (442)
T PLN02208 244 FLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWG---GWVQ 320 (442)
T ss_pred HHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEee---ccCC
Confidence 99876778999999999875 2 22333 22 234555565411 1 1 1255 455544 4777
Q ss_pred --HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEccCC---CCcccHHHHHHHH
Q 002674 275 --DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRD---LLTGHWKPYLERA 346 (894)
Q Consensus 275 --~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~-~G~g~~~~~~~---~~~~~l~~~l~~l 346 (894)
++|+| +.+||||||+||++|++++|||+|++| .+.||+.|++++++ .|+|+.+...+ ++.+++..+|+++
T Consensus 321 Q~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P--~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~ 398 (442)
T PLN02208 321 QPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIP--FLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSV 398 (442)
T ss_pred HHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecC--cchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHH
Confidence 79987 567999999999999999999999999 78999999998776 89999997654 7888999999999
Q ss_pred HhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 347 ISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 347 l~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
++++. ......++-|..|.+.+
T Consensus 399 m~~~~---e~g~~~r~~~~~~~~~~ 420 (442)
T PLN02208 399 MDKDS---DLGKLVRSNHTKLKEIL 420 (442)
T ss_pred hcCCc---hhHHHHHHHHHHHHHHH
Confidence 96541 01244555566666554
No 28
>PLN00414 glycosyltransferase family protein
Probab=99.87 E-value=5.4e-20 Score=211.36 Aligned_cols=348 Identities=16% Similarity=0.146 Sum_probs=200.9
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc-cccc-ccCCCceeEeeeccC--CCcccccccccCH
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTS-EIQSPRLFIRKVLLD--CGAVQADALTVDR 88 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~-~~~~-~i~~p~~~~~~~~~d--~g~~~~~~~~~d~ 88 (894)
.+|+.+ ++.+|.||++|++.||+.|..+|++|||+++.... .... ....+.+.+..+... .|+........+.
T Consensus 4 ~~HVvl---vPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l 80 (446)
T PLN00414 4 KFHAFM---YPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDL 80 (446)
T ss_pred CCEEEE---ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccc
Confidence 345554 57889999999999999999999999999865311 0111 000112333222111 1221110000011
Q ss_pred HHHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCc-hh-HHH----HH--H-Hhh
Q 002674 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFS-WD-FIY----AE--Y-VMA 159 (894)
Q Consensus 89 ~~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~-~~-~~~----~~--~-~~~ 159 (894)
.... ...+......+.....++++..+||+||+|+.+|+..+|+.+|||.+.+...+ .. ..+ .. . .+.
T Consensus 81 ~~~~---~~~~~~a~~~l~~~l~~~L~~~~p~cVV~D~~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~~pg 157 (446)
T PLN00414 81 PNST---KKPIFDAMDLLRDQIEAKVRALKPDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPD 157 (446)
T ss_pred hhhH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCchhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCCCCC
Confidence 1100 11111112223334455667778999999998899999999999998763222 00 000 00 0 000
Q ss_pred hcc--------chH--H-------HHHHHHhhccccceeeecCCCCC-------CC-CC-CceeecCcccccCc-----c
Q 002674 160 AGH--------HHR--S-------IVWQIAEDYSHCEFLIRLPGYCP-------MP-AF-RDVIDVPLVVRRLH-----K 208 (894)
Q Consensus 160 ~~~--------~~~--~-------i~~~l~~~y~~~~~ll~~p~~~~-------~p-~~-~~v~~vp~~~~~~~-----~ 208 (894)
.+. ... . ......+....++.++..++... +. .. .++..|||+..... .
T Consensus 158 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~ 237 (446)
T PLN00414 158 YPLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKP 237 (446)
T ss_pred CCCCcCcCchhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcc
Confidence 000 000 0 00011122222333333332211 01 11 35777888642111 1
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhHH---hhCC--CCcEEEEeC---CCC--CCCCCCeEEC----CCC--
Q 002674 209 SRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKE---EYLP--SGWKCLVCG---ASD--SQLPPNFIKL----PKD-- 270 (894)
Q Consensus 209 ~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~~---~Ll~--~~~~~vv~G---~~~--~~lp~nv~v~----g~~-- 270 (894)
...++-+||+-.+++++|||+|||.... .++.+ .|.. .++.+|+.. ... ..+|+|+... |.+
T Consensus 238 ~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~ 317 (446)
T PLN00414 238 LEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWE 317 (446)
T ss_pred cHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEe
Confidence 1245778999888899999999998763 34443 3332 344445532 111 1266665311 111
Q ss_pred CCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH-HcCcEEEEccC---CCCcccHHHH
Q 002674 271 AYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWKPY 342 (894)
Q Consensus 271 ~~vp--~ll~~~--d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~-~~G~g~~~~~~---~~~~~~l~~~ 342 (894)
.|+| ++|+|+ ++||||||+||++|++++|+|+|++| .+.||+.||++++ ..|+|+.+..+ .++.+.++++
T Consensus 318 ~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~ 395 (446)
T PLN00414 318 GWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIP--QLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDT 395 (446)
T ss_pred ccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecC--cccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHH
Confidence 5777 799875 88999999999999999999999999 7899999999995 68999999643 3788899999
Q ss_pred HHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 343 LERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 343 l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
+++++.++. ......++.|..|.+.+
T Consensus 396 v~~~m~~~~---e~g~~~r~~a~~~~~~~ 421 (446)
T PLN00414 396 VKSVMDKDS---EIGNLVKRNHKKLKETL 421 (446)
T ss_pred HHHHhcCCh---hhHHHHHHHHHHHHHHH
Confidence 999996541 12234566777777664
No 29
>PLN02210 UDP-glucosyl transferase
Probab=99.86 E-value=1.6e-19 Score=208.49 Aligned_cols=329 Identities=15% Similarity=0.151 Sum_probs=191.3
Q ss_pred cCCCCcccHHHHHHHHHH--HHHCCCeEEEEeCCCCcccccccC--CCceeEeeeccCCCcccccccccCHHHHHHHHHH
Q 002674 22 VTGHGFGHATRVVEVVRN--LISAGHDVHVVTGAPDFVFTSEIQ--SPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~--L~~~Gh~Vt~~~~~~~~~~~~~i~--~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~ 97 (894)
++.++.||++|++.||+. |.++|+.|||++........+.+. .+.+.+..+ ..|+... ...+.. .+..
T Consensus 14 ~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~--~~glp~~--~~~~~~----~~~~ 85 (456)
T PLN02210 14 VTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFF--SDGLPKD--DPRAPE----TLLK 85 (456)
T ss_pred eCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEEC--CCCCCCC--cccCHH----HHHH
Confidence 578899999999999999 569999999998764210001111 112233221 1232211 101111 1111
Q ss_pred HhhcchHHhHHHHHHHHhcCCCcEEEECC-chhHHHHHHHhCCcEEEEecCch-hH-HHHHH------------------
Q 002674 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-DF-IYAEY------------------ 156 (894)
Q Consensus 98 ~~~~~~~~ll~~~~~~L~~~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~-~~-~~~~~------------------ 156 (894)
.+ .........+++++.+||+||+|. .+|+..+|+.+|||.+.+...+. .. .+..+
T Consensus 86 ~~---~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T PLN02210 86 SL---NKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVE 162 (456)
T ss_pred HH---HHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeee
Confidence 11 111223345667777899999996 88999999999999987622110 00 00000
Q ss_pred Hhhhc--c--c------------hHHHHHHHHhhccccceeeecCCCCCC-------CCCCceeecCccccc----Cc--
Q 002674 157 VMAAG--H--H------------HRSIVWQIAEDYSHCEFLIRLPGYCPM-------PAFRDVIDVPLVVRR----LH-- 207 (894)
Q Consensus 157 ~~~~~--~--~------------~~~i~~~l~~~y~~~~~ll~~p~~~~~-------p~~~~v~~vp~~~~~----~~-- 207 (894)
+|... . . +..+...+......++.++..++...- ....++..|||.... ..
T Consensus 163 ~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~~~~~~~ 242 (456)
T PLN02210 163 LPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLGDDEE 242 (456)
T ss_pred CCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhhcCcccc
Confidence 00000 0 0 000111111122223333322222110 112357788875320 00
Q ss_pred -----------cChHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hhHHhhCCCCcEEEE-eCCCC----CC-----C-
Q 002674 208 -----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLV-CGASD----SQ-----L- 260 (894)
Q Consensus 208 -----------~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-~----~l~~~Ll~~~~~~vv-~G~~~----~~-----l- 260 (894)
....++.+|++..+++++|||+|||.... . ++..+|...++.|++ ++... .. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~ 322 (456)
T PLN02210 243 ETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK 322 (456)
T ss_pred cccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc
Confidence 01234567887666788999999997642 2 233345445555443 23211 11 1
Q ss_pred CCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEccC---
Q 002674 261 PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRR--- 332 (894)
Q Consensus 261 p~nv~v~g~~~~vp--~ll~~~d--~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~-~G~g~~~~~~--- 332 (894)
+++..+. .|+| ++|+|++ +||||||+||++|++++|||+|++| .+.||+.||+++++ .|+|+.+...
T Consensus 323 ~~~g~v~---~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P--~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 397 (456)
T PLN02210 323 EGQGVVL---EWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYP--SWTDQPIDARLLVDVFGIGVRMRNDAVD 397 (456)
T ss_pred CCCeEEE---ecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecc--cccccHHHHHHHHHHhCeEEEEeccccC
Confidence 2444444 4666 7999875 9999999999999999999999999 78999999999987 8999998642
Q ss_pred -CCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 333 -DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 333 -~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
.++.+++.+++++++.++ .....++-|..|.+.+
T Consensus 398 ~~~~~~~l~~av~~~m~~~-----~g~~~r~~a~~l~~~a 432 (456)
T PLN02210 398 GELKVEEVERCIEAVTEGP-----AAADIRRRAAELKHVA 432 (456)
T ss_pred CcCCHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHH
Confidence 477889999999999654 2234555666666654
No 30
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.86 E-value=8.4e-20 Score=212.98 Aligned_cols=347 Identities=15% Similarity=0.146 Sum_probs=190.8
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccC-----CCc--eeEeeeccC---CCcccc
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-----SPR--LFIRKVLLD---CGAVQA 81 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~-~~~~i~-----~p~--~~~~~~~~d---~g~~~~ 81 (894)
+.|+.+ ++.+|.||++|++.||+.|..+|++|||+++..... +..... .+. +.+..+.+. .|....
T Consensus 5 ~~hVvl---vp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g 81 (482)
T PLN03007 5 KLHILF---FPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEG 81 (482)
T ss_pred CcEEEE---ECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCC
Confidence 345444 578899999999999999999999999998764210 111000 011 111111111 122100
Q ss_pred c-ccc-cC--HHHHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECC-chhHHHHHHHhCCcEEEEecCc-hh----H
Q 002674 82 D-ALT-VD--RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD----F 151 (894)
Q Consensus 82 ~-~~~-~d--~~~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~-~~----~ 151 (894)
. ... .+ .......+...+......+.....++++..+||+||+|. .+|+..+|+.+|||.+.+...+ +. .
T Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~ 161 (482)
T PLN03007 82 CENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASY 161 (482)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHH
Confidence 0 000 00 000000111111112233334456667777899999996 8899999999999998762211 00 0
Q ss_pred -HHHHH-------------Hhhhc-------------cc---hHHHHHHHHhhccccceeeecCCCC-------CCCCC-
Q 002674 152 -IYAEY-------------VMAAG-------------HH---HRSIVWQIAEDYSHCEFLIRLPGYC-------PMPAF- 193 (894)
Q Consensus 152 -~~~~~-------------~~~~~-------------~~---~~~i~~~l~~~y~~~~~ll~~p~~~-------~~p~~- 193 (894)
.+..+ ++..+ .. +..+...+......++.++..++.. .++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~ 241 (482)
T PLN03007 162 CIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFV 241 (482)
T ss_pred HHHhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhcc
Confidence 00000 00000 00 0001111111111222222222110 01111
Q ss_pred -CceeecCccccc----------C---ccChHHHHHHhCCCCCCcEEEEEcCCCCCh--h---hhHHhhCCCCcEEEE-e
Q 002674 194 -RDVIDVPLVVRR----------L---HKSRKEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGWKCLV-C 253 (894)
Q Consensus 194 -~~v~~vp~~~~~----------~---~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~---~l~~~Ll~~~~~~vv-~ 253 (894)
..+..||++... . ...+.++.+|+...+++++|||+|||.... . ++..+|...++.|++ .
T Consensus 242 ~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~ 321 (482)
T PLN03007 242 AKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVV 321 (482)
T ss_pred CCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 246667774211 0 012345678887766788999999998542 2 233344444444433 2
Q ss_pred CCC----C--CCCC---------CCeEECCCCCCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchH
Q 002674 254 GAS----D--SQLP---------PNFIKLPKDAYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEP 314 (894)
Q Consensus 254 G~~----~--~~lp---------~nv~v~g~~~~vp--~ll~~~--d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~ 314 (894)
+.. . ..+| .|+.+.+ |+| ++|+|+ .+||||||+||++|++++|||+|++| .+.||+
T Consensus 322 ~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~---w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P--~~~DQ~ 396 (482)
T PLN03007 322 RKNENQGEKEEWLPEGFEERTKGKGLIIRG---WAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP--VGAEQF 396 (482)
T ss_pred ecCCcccchhhcCCHHHHHHhccCCEEEec---CCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc--chhhhh
Confidence 321 1 0133 4666654 666 799986 55999999999999999999999999 789999
Q ss_pred HHHHHHH---HcCcEEEE------ccCCCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 315 FLRNMLE---FYQGGVEM------IRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 315 ~na~~l~---~~G~g~~~------~~~~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
.||++++ +.|+++.. ....++.+.+.+++++++.++ .....++.|..|.+.+.
T Consensus 397 ~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~-----~~~~~r~~a~~~~~~a~ 458 (482)
T PLN03007 397 YNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGE-----EAEERRLRAKKLAEMAK 458 (482)
T ss_pred hhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHH
Confidence 9999886 44555422 334578889999999999664 23455566666666543
No 31
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.86 E-value=1.7e-19 Score=190.84 Aligned_cols=337 Identities=21% Similarity=0.238 Sum_probs=203.3
Q ss_pred ceEEEEEec-CCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCC---CcccccccCCCceeEeee-ccCCCccccccccc
Q 002674 14 KHLVFAYYV-TGHGFGHATRVVEVVRNLISA--GHDVHVVTGAP---DFVFTSEIQSPRLFIRKV-LLDCGAVQADALTV 86 (894)
Q Consensus 14 ~~~~Il~~v-~~~G~GHv~r~laLA~~L~~~--Gh~Vt~~~~~~---~~~~~~~i~~p~~~~~~~-~~d~g~~~~~~~~~ 86 (894)
++++|+||+ ...|.||+.||+.+|++|.+. |.+|+++++.+ .|.....++ .+.++.+ ..+.|.+.......
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd--~V~LPsl~k~~~G~~~~~d~~~ 85 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVD--FVKLPSLIKGDNGEYGLVDLDG 85 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCc--eEecCceEecCCCceeeeecCC
Confidence 455777776 567899999999999999998 99999999876 232222221 1122221 11233332111122
Q ss_pred CHHHHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHH------HHHH--hCCcE-EEEecCchhHHHHHHH
Q 002674 87 DRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACR------AAAD--AGIRS-VCVTNFSWDFIYAEYV 157 (894)
Q Consensus 87 d~~~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~------aA~~--lgIP~-V~isn~~~~~~~~~~~ 157 (894)
+ +....++ +..+ .+..++.+|||++|+|..|.|+. .+.. .+-+. ..+++.. +.....
T Consensus 86 ~----l~e~~~~----Rs~l---il~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~--D~p~~~- 151 (400)
T COG4671 86 D----LEETKKL----RSQL---ILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIR--DIPQEL- 151 (400)
T ss_pred C----HHHHHHH----HHHH---HHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhh--hchhhh-
Confidence 2 2222221 1222 24557889999999998777642 2222 13223 3332211 000000
Q ss_pred hhhccchHHHHHHHHhhccccceeeecC-CCC-----CCC-C-CCceeecCccccc-CccChHHHHHHhCCCCCCcEEEE
Q 002674 158 MAAGHHHRSIVWQIAEDYSHCEFLIRLP-GYC-----PMP-A-FRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLIL 228 (894)
Q Consensus 158 ~~~~~~~~~i~~~l~~~y~~~~~ll~~p-~~~-----~~p-~-~~~v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlv 228 (894)
.. ..........+...|... .+.+-| ++. +.+ . ..+++++|.+-+. +......- ..+.+..|+|
T Consensus 152 ~~-~w~~~~~~~~I~r~yD~V-~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~-----~~pE~~~Ilv 224 (400)
T COG4671 152 EA-DWRRAETVRLINRFYDLV-LVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPH-----EAPEGFDILV 224 (400)
T ss_pred cc-chhhhHHHHHHHHhheEE-EEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCc-----CCCccceEEE
Confidence 00 000001111222223211 011111 111 111 1 1345666665221 11110000 0134567999
Q ss_pred EcCCCCChhhhHHhh-----CCCCc---EEEEeCCCCCC---------CC--CCeEECCCCCCHHHHHhhcCEEEecCCh
Q 002674 229 NFGGQPAGWKLKEEY-----LPSGW---KCLVCGASDSQ---------LP--PNFIKLPKDAYTPDFMAASDCMLGKIGY 289 (894)
Q Consensus 229 s~Gs~~~~~~l~~~L-----l~~~~---~~vv~G~~~~~---------lp--~nv~v~g~~~~vp~ll~~~d~~I~~~G~ 289 (894)
+.||.+.+.++.... +.+++ -++++|+..++ -+ ++++++.|...+.++|+.|+++|+.+||
T Consensus 225 s~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~vVSm~GY 304 (400)
T COG4671 225 SVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARLVVSMGGY 304 (400)
T ss_pred ecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhheeeecccc
Confidence 999888876665421 11222 25678988753 23 7899999999999999999999999999
Q ss_pred hHHHHHHHcCCcEEEEeCC-CCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCc--cCCCCHHHHHHHH
Q 002674 290 GTVSEALAYKLPFVFVRRD-YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY--EGGINGGEVAAHI 366 (894)
Q Consensus 290 ~t~~Eal~~G~P~l~ip~~-~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~--~~~~~g~~~~A~~ 366 (894)
||+||.+.+|||.|.||+. +-.||-..|+++++.|..-++.++++++..+.++|..+++.+... .-..+|++.++.+
T Consensus 305 NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~~~~~L~L~G~~~~a~~ 384 (400)
T COG4671 305 NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSPSKPHLDLEGLEHIARI 384 (400)
T ss_pred hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCCCCccccCchhhHhHHHH
Confidence 9999999999999999986 334888899999999999999999999999999999998754221 2588999999999
Q ss_pred HHHHHcc
Q 002674 367 LQETAIG 373 (894)
Q Consensus 367 i~~~l~~ 373 (894)
+.+++..
T Consensus 385 l~e~L~~ 391 (400)
T COG4671 385 LAELLST 391 (400)
T ss_pred HHHHhhh
Confidence 9988754
No 32
>PTZ00298 mevalonate kinase; Provisional
Probab=99.85 E-value=9.2e-21 Score=210.59 Aligned_cols=186 Identities=17% Similarity=0.154 Sum_probs=139.4
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecC-CchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCC
Q 002674 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKIS-PSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGP 576 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~-d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~ 576 (894)
....|||||+|||||+|+||.+++..+|+++..+.+...+ ++. +.+.+.
T Consensus 11 ~~~~~~~kvil~GEHaVvyg~~aI~~~I~~~d~~~i~~~~~~~~---------------------~~~~~~--------- 60 (328)
T PTZ00298 11 GKHIGYGKVILFGEHFVVYGAEAIVAGIDEYTECRLELTKGVPG---------------------LQVVDQ--------- 60 (328)
T ss_pred cCCCcCeeEEEEecceeecCCchhhhecccceEEEEEEccCCCC---------------------ceeccc---------
Confidence 4568999999999999999999999999998666666433 111 111000
Q ss_pred ceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCC-CCCEEEEEEeCCCCCCCCChHHHHHHH
Q 002674 577 TFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF-EDSISMLVSSAVPEGKGVSSSASVEVA 655 (894)
Q Consensus 577 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~-~~G~~i~i~s~iP~g~GLgSSAAl~va 655 (894)
...++ .....-.|.+..++..+.+..+... ..|++|.|.++||+|+|||||||++||
T Consensus 61 -----~~~~~-----------------~~~~~~~n~~~~a~~~~~~~~~~~~~~~g~~I~I~~~IP~gaGLGSSsA~avA 118 (328)
T PTZ00298 61 -----RPAVP-----------------GYIVEKREEQRKAHQLVLRHLNIDTSVDGLKMHLGGPLVPSSGIGASASDVVS 118 (328)
T ss_pred -----ccccc-----------------chHHHhHHHHHHHHHHHHHHHhcccCCCCeEEEEECCCCCCCCchHHHHHHHH
Confidence 00000 0000114555556666666666432 149999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCC-ceeEEeecCCCeEEEEEeCCC
Q 002674 656 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPA-ELLGVVEIPSHIRFWGIDSGI 734 (894)
Q Consensus 656 ~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~-~~~~~v~~p~~~~~vv~~sgv 734 (894)
++.|++.+++.++++++++++|+.+|+.++|.++|. |+.++++||. +++..... ...++++++.++.+++++|++
T Consensus 119 ~l~al~~l~~~~ls~~el~~~a~~~E~~~~g~~sG~-D~~~~~~Gg~---~~~~~~~g~~~~~~l~~~~~~~lvv~~~~~ 194 (328)
T PTZ00298 119 LSRALSELYQLNLTEEEVNLSAFVGEGGYHGTPSGA-DNTAATYGGL---ISYRRVNGKSVFKRIAFQQPLYLVVCSTGI 194 (328)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCChH-HHHHHHcCCe---EEEecCCCccceeEecCCCCCeEEEEECCC
Confidence 999999999999999999999999999999999995 9999999993 44443222 122566777788999999999
Q ss_pred CcccC
Q 002674 735 RHSVG 739 (894)
Q Consensus 735 ~~~~~ 739 (894)
+++|.
T Consensus 195 ~~sT~ 199 (328)
T PTZ00298 195 TASTT 199 (328)
T ss_pred chhHH
Confidence 99874
No 33
>PLN02764 glycosyltransferase family protein
Probab=99.85 E-value=6.9e-19 Score=201.22 Aligned_cols=346 Identities=13% Similarity=0.101 Sum_probs=198.8
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccC-CC-ceeEeeeccC--CCcccccccccCHH-H
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-SP-RLFIRKVLLD--CGAVQADALTVDRL-A 90 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~-~p-~~~~~~~~~d--~g~~~~~~~~~d~~-~ 90 (894)
++|++ ++.++.||++|++.||+.|+.+|+.|||++..........+. .+ .+.++.+... .|+........+.. .
T Consensus 6 ~Hvvl-~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~ 84 (453)
T PLN02764 6 FHVLM-YPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVT 84 (453)
T ss_pred cEEEE-ECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChh
Confidence 34433 578899999999999999999999999998654211101011 01 1122222111 23321100000001 0
Q ss_pred HHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCc---hhHH-HH-HH----Hhhhc
Q 002674 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFS---WDFI-YA-EY----VMAAG 161 (894)
Q Consensus 91 ~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~---~~~~-~~-~~----~~~~~ 161 (894)
....+.. ....+.....++|++.+||+||+|+.+|+..+|+.+|||.+.+...+ .... +. .. .+..+
T Consensus 85 ~~~~~~~----a~~~~~~~~~~~l~~~~~~~iV~D~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp 160 (453)
T PLN02764 85 SADLLMS----AMDLTRDQVEVVVRAVEPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVPPPGYP 160 (453)
T ss_pred HHHHHHH----HHHHhHHHHHHHHHhCCCCEEEECCchhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCCCCCCC
Confidence 0111111 11122234456677778999999998899999999999998763221 0000 00 00 00000
Q ss_pred ------------------c-----chHHHHHHHHhhccccceeeecCCCCCCC-------CC--CceeecCcccccC---
Q 002674 162 ------------------H-----HHRSIVWQIAEDYSHCEFLIRLPGYCPMP-------AF--RDVIDVPLVVRRL--- 206 (894)
Q Consensus 162 ------------------~-----~~~~i~~~l~~~y~~~~~ll~~p~~~~~p-------~~--~~v~~vp~~~~~~--- 206 (894)
. ....+..++......++.++..+++..-+ .. +++..||++...+
T Consensus 161 ~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~ 240 (453)
T PLN02764 161 SSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKT 240 (453)
T ss_pred CCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcccc
Confidence 0 00011111111122233333333332111 11 3577888763211
Q ss_pred ccChHHHHHHhCCCCCCcEEEEEcCCCCC-h-hhhHH---hhC--CCCcEEEEeC-CC--C--CCCCCCeEEC--CC---
Q 002674 207 HKSRKEVRKELGIEDDVKLLILNFGGQPA-G-WKLKE---EYL--PSGWKCLVCG-AS--D--SQLPPNFIKL--PK--- 269 (894)
Q Consensus 207 ~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~-~~l~~---~Ll--~~~~~~vv~G-~~--~--~~lp~nv~v~--g~--- 269 (894)
...+.++.+||+-.+++++|||||||... . .++.+ .|. ..+|.+|+.. .+ . ..+|+|+... +.
T Consensus 241 ~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v 320 (453)
T PLN02764 241 RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVV 320 (453)
T ss_pred ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcE
Confidence 11235678899988889999999999865 2 33433 333 3456666642 11 1 1266665321 11
Q ss_pred -CCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH-HcCcEEEEccC---CCCcccHH
Q 002674 270 -DAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWK 340 (894)
Q Consensus 270 -~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~-~~G~g~~~~~~---~~~~~~l~ 340 (894)
..|+| ++|+| +++||||||+||++|++++|+|+|++| .+.||+.||++++ ..|+|+.+..+ .++.+++.
T Consensus 321 ~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~ 398 (453)
T PLN02764 321 WGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVP--QLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLR 398 (453)
T ss_pred EeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhceEEEeccccCCccCHHHHH
Confidence 15777 79987 678999999999999999999999999 7899999999996 57999887543 47888999
Q ss_pred HHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 341 PYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 341 ~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
+++++++++.. . .....++.|..|.+.+
T Consensus 399 ~av~~vm~~~~-~--~g~~~r~~a~~~~~~~ 426 (453)
T PLN02764 399 DAINSVMKRDS-E--IGNLVKKNHTKWRETL 426 (453)
T ss_pred HHHHHHhcCCc-h--hHHHHHHHHHHHHHHH
Confidence 99999996541 1 2233555555665554
No 34
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only]
Probab=99.85 E-value=9.1e-21 Score=195.00 Aligned_cols=186 Identities=26% Similarity=0.332 Sum_probs=140.3
Q ss_pred EEEEcCccccccccccccC------CCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 002674 498 FVARAPGRLDVMGGIADYS------GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~------gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 571 (894)
++.+||-|+.+.|+.||+. ||.|++++||+++|+.+.+..|.++++. .+
T Consensus 2 ii~raPLRItfgGGGTDvepy~~k~GGaVlnatIdky~y~~i~~~~d~~I~~~----------------------~~--- 56 (333)
T COG2605 2 IISRAPLRITFGGGGTDVEPYCSKHGGAVLNATIDKYIYVTIEKGFDDEIRVR----------------------YD--- 56 (333)
T ss_pred cccccceEEEecCCCcCchHHHHhcCCEEEEeeeeeEEEEEEccCCCceEEEe----------------------cc---
Confidence 4668999999999999996 9999999999999999999887664421 10
Q ss_pred CCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHH-HHHHhCCCCCCCEEEEEEeCCCCCCCCChHH
Q 002674 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-LMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (894)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~-~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSA 650 (894)
+ + + .++++ +.+ . ++ .-++.++.. ++...|. +.+.+...+|+|+|+|||||+
T Consensus 57 --~--~-~-~v~~~------~~~---------~--h~--~~~~~~l~r~~l~~~g~---~~~el~~~~D~P~GSGLGSSS 108 (333)
T COG2605 57 --R--T-E-FVKSY------LEN---------E--HK--PLVVESLKRDFLEFNGG---TPIELHTQSDAPPGSGLGSSS 108 (333)
T ss_pred --h--H-H-hhhhh------Hhh---------c--Cc--hHHHHHHHHHHHhhcCC---CceEEEEecCCCCCCCCCchH
Confidence 0 0 0 00110 111 0 11 223344332 2322222 128999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCc--eeEEeecC------
Q 002674 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE--LLGVVEIP------ 722 (894)
Q Consensus 651 Al~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~--~~~~v~~p------ 722 (894)
|++||++.|+..+-|..+++.+||+.|+++|++..+...|.+||++++|||.| +++|+... +..++.+.
T Consensus 109 a~vvaLl~a~~~~kg~~~~~~~LA~eAy~IER~~l~~~gG~QDqYaaA~GGFn---fMEf~~~~~V~v~pL~i~~e~~~E 185 (333)
T COG2605 109 AFVVALLNALHAWKGESLGPYELAREAYEIEREDLKIVGGKQDQYAAAFGGFN---FMEFRGNGEVVVNPLRINRERTAE 185 (333)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhccccccccHHHHHhCCce---EEEEcCCCcEEEeecccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999975 45666543 22444443
Q ss_pred CCeEEEEEeCCCCcccC
Q 002674 723 SHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 723 ~~~~~vv~~sgv~~~~~ 739 (894)
...++++++||+.|.++
T Consensus 186 le~~~lL~yTGi~R~Ss 202 (333)
T COG2605 186 LEARLLLYYTGITRQSS 202 (333)
T ss_pred HHhceEEEEeccccchh
Confidence 25789999999999875
No 35
>PLN02670 transferase, transferring glycosyl groups
Probab=99.84 E-value=7.8e-19 Score=202.31 Aligned_cols=343 Identities=13% Similarity=0.148 Sum_probs=194.4
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccC--CCceeEeeeccC--CCcccccccccCHHHHHHHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ--SPRLFIRKVLLD--CGAVQADALTVDRLASLEKYS 96 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~-~~~~i~--~p~~~~~~~~~d--~g~~~~~~~~~d~~~~l~~~~ 96 (894)
++.++.||++|++.||+.|..+|..|||++...... ...... .+.+.+..+... .|+........+.......+.
T Consensus 12 ~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~ 91 (472)
T PLN02670 12 FPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLL 91 (472)
T ss_pred eCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhHHHH
Confidence 578999999999999999999999999998654211 111000 112334333211 122210000011110000011
Q ss_pred HHhhcchHHhHHHHHHHHhcCCCcEEEECC-chhHHHHHHHhCCcEEEEecCch-h-HHHHH---H-----Hhh------
Q 002674 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYAE---Y-----VMA------ 159 (894)
Q Consensus 97 ~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~-~-~~~~~---~-----~~~------ 159 (894)
.- ....+.....+++++.+|++||+|. .+|+..+|+.+|||.+.+..++- . ..+.. + ...
T Consensus 92 ~~---~~~~~~~~~~~~l~~~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (472)
T PLN02670 92 KK---AFDLLEPPLTTFLETSKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFT 168 (472)
T ss_pred HH---HHHHhHHHHHHHHHhCCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCcccccc
Confidence 00 1111223335566667899999996 89999999999999988743220 0 00000 0 000
Q ss_pred -hc---c----------chHHHH----------HHHH---hhccccceeeecCCCCC-------CC-CC-CceeecCccc
Q 002674 160 -AG---H----------HHRSIV----------WQIA---EDYSHCEFLIRLPGYCP-------MP-AF-RDVIDVPLVV 203 (894)
Q Consensus 160 -~~---~----------~~~~i~----------~~l~---~~y~~~~~ll~~p~~~~-------~p-~~-~~v~~vp~~~ 203 (894)
.+ + .+..+. ..+. .....++.++..++... +. .. .++..|||+.
T Consensus 169 ~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~ 248 (472)
T PLN02670 169 VVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLP 248 (472)
T ss_pred CCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCC
Confidence 00 0 000000 0000 00111222222222210 01 11 3577788753
Q ss_pred cc--C--c-c--C---hHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCCC--CcEEEEeCC-CC-----CCC
Q 002674 204 RR--L--H-K--S---RKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPS--GWKCLVCGA-SD-----SQL 260 (894)
Q Consensus 204 ~~--~--~-~--~---~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~~--~~~~vv~G~-~~-----~~l 260 (894)
.. . . . . .+++.+||+-.+++.+|||||||... .. ++...|... .+.+++... +. ..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~l 328 (472)
T PLN02670 249 PVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEML 328 (472)
T ss_pred ccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcC
Confidence 21 1 0 0 1 14577888876678899999999865 22 233344333 334444321 11 125
Q ss_pred CCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEE
Q 002674 261 PPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGV 327 (894)
Q Consensus 261 p~n---------v~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~ 327 (894)
|+| +.+. .|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.|++++++.|+|+
T Consensus 329 p~~f~~~~~~rG~vv~---~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~g~Gv 403 (472)
T PLN02670 329 PDGFEERVKGRGMIHV---GWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFP--VLNEQGLNTRLLHGKKLGL 403 (472)
T ss_pred ChHHHHhccCCCeEEe---CcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCc--chhccHHHHHHHHHcCeeE
Confidence 555 3333 5777 79987 566999999999999999999999999 7899999999999999999
Q ss_pred EEccC----CCCcccHHHHHHHHHhcCC--Ccc----------CCCCHHHHHHHHHHHHHc
Q 002674 328 EMIRR----DLLTGHWKPYLERAISLKP--CYE----------GGINGGEVAAHILQETAI 372 (894)
Q Consensus 328 ~~~~~----~~~~~~l~~~l~~ll~~~~--~~~----------~~~~g~~~~A~~i~~~l~ 372 (894)
.+... .++.+++.+++++++.+++ .|+ ....++.++|+.+++++.
T Consensus 404 ~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 404 EVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred EeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHH
Confidence 99753 3778899999999996642 121 344555555555555543
No 36
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.84 E-value=1.4e-18 Score=199.31 Aligned_cols=330 Identities=14% Similarity=0.172 Sum_probs=191.5
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccCCCceeEeeeccCCCccccc-ccccCHHHHHHHHHHHh
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQAD-ALTVDRLASLEKYSETA 99 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~-~~~~i~~p~~~~~~~~~d~g~~~~~-~~~~d~~~~l~~~~~~~ 99 (894)
++.++.||++|++.+|+.|+.+|+.|||++...... .... ..+.+.+..+ ..|+.... ....+....+..+..
T Consensus 11 ~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-~~~~i~~~~i--pdglp~~~~~~~~~~~~~~~~~~~-- 85 (449)
T PLN02173 11 VPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-PSSPISIATI--SDGYDQGGFSSAGSVPEYLQNFKT-- 85 (449)
T ss_pred ecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-CCCCEEEEEc--CCCCCCcccccccCHHHHHHHHHH--
Confidence 578999999999999999999999999998754221 1110 1123444443 22332100 000011111111110
Q ss_pred hcchHHhHHHHHHHHhc----CCC-cEEEECC-chhHHHHHHHhCCcEEEEecCc---hhHHHHHH---------Hhhhc
Q 002674 100 VAPRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFIYAEY---------VMAAG 161 (894)
Q Consensus 100 ~~~~~~ll~~~~~~L~~----~~P-DlVV~D~-~~~a~~aA~~lgIP~V~isn~~---~~~~~~~~---------~~~~~ 161 (894)
.......++|++ .+| ++||+|. .+|+..+|+.+|||.+.+...+ ....+... ++..+
T Consensus 86 -----~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~~~~~~~pg~p 160 (449)
T PLN02173 86 -----FGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLP 160 (449)
T ss_pred -----hhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccCCccCCCCCCC
Confidence 111222344443 356 9999997 8899999999999998763211 00000000 00000
Q ss_pred c----c--------------hHHHHHHHHhhccccceeeecCCCCC-------CCCCCceeecCccccc--------Cc-
Q 002674 162 H----H--------------HRSIVWQIAEDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR--------LH- 207 (894)
Q Consensus 162 ~----~--------------~~~i~~~l~~~y~~~~~ll~~p~~~~-------~p~~~~v~~vp~~~~~--------~~- 207 (894)
. . ...+..++ .....++.++..++... +....++..|||+... ..
T Consensus 161 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~ 239 (449)
T PLN02173 161 LLELQDLPTFVTPTGSHLAYFEMVLQQF-TNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDN 239 (449)
T ss_pred CCChhhCChhhcCCCCchHHHHHHHHHH-hhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhccccccccc
Confidence 0 0 00011111 11222333332222211 0111357778776310 00
Q ss_pred ---------cChHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCCCCcEEEEeCCCCCCC---------CCCe
Q 002674 208 ---------KSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCLVCGASDSQL---------PPNF 264 (894)
Q Consensus 208 ---------~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~~~~~~vv~G~~~~~l---------p~nv 264 (894)
...+.+.+|+...+++++|||||||... .. ++...|...++.+++.......+ +.|+
T Consensus 240 ~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~ 319 (449)
T PLN02173 240 DYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETVDKDKS 319 (449)
T ss_pred cccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhhcCCce
Confidence 0122466788877778899999999765 22 23334533444444431111112 4566
Q ss_pred EECCCCCCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEccCC----CC
Q 002674 265 IKLPKDAYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRD----LL 335 (894)
Q Consensus 265 ~v~g~~~~vp--~ll~~~--d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~-G~g~~~~~~~----~~ 335 (894)
.+.+ |+| ++|+|. .+||||||+||++|++++|||+|++| .+.||+.|++++++. |+|+.+..++ ++
T Consensus 320 ~i~~---W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~ 394 (449)
T PLN02173 320 LVLK---WSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMP--QWTDQPMNAKYIQDVWKVGVRVKAEKESGIAK 394 (449)
T ss_pred EEeC---CCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecC--chhcchHHHHHHHHHhCceEEEeecccCCccc
Confidence 7664 666 799984 59999999999999999999999999 789999999999875 8888886432 46
Q ss_pred cccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 336 TGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 336 ~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
.+.+.+++++++.++ .....++.|..|.+.+.
T Consensus 395 ~e~v~~av~~vm~~~-----~~~~~r~~a~~~~~~a~ 426 (449)
T PLN02173 395 REEIEFSIKEVMEGE-----KSKEMKENAGKWRDLAV 426 (449)
T ss_pred HHHHHHHHHHHhcCC-----hHHHHHHHHHHHHHHHH
Confidence 789999999999654 22455666666666543
No 37
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.84 E-value=7.8e-19 Score=203.83 Aligned_cols=340 Identities=13% Similarity=0.109 Sum_probs=192.8
Q ss_pred eEEEEEecCCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCCCcc-cccccCCCceeEeeeccCCCcccccccccCHHHH
Q 002674 15 HLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLAS 91 (894)
Q Consensus 15 ~~~Il~~v~~~G~GHv~r~laLA~~L~~~--Gh~Vt~~~~~~~~~-~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~ 91 (894)
+.+|++ ++.++.||++|++.||+.|..+ ||.|||++...... .......+++.+..+. .+.........+....
T Consensus 10 ~~hVvl-vp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp--~~~p~~~~~~~~~~~~ 86 (459)
T PLN02448 10 SCHVVA-MPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIP--NVIPSELVRAADFPGF 86 (459)
T ss_pred CcEEEE-ECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECC--CCCCCccccccCHHHH
Confidence 345543 4677899999999999999999 99999998764211 1111111244454432 1211100001122111
Q ss_pred HHHHHHHhhcchHHhHHHHHHHHhc--CCCcEEEECC-chhHHHHHHHhCCcEEEEecCch-h-HHHHHH----------
Q 002674 92 LEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYAEY---------- 156 (894)
Q Consensus 92 l~~~~~~~~~~~~~ll~~~~~~L~~--~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~-~-~~~~~~---------- 156 (894)
+..+. ........+++++ .++|+||+|. .+++..+|+.+|||.+.+....- . ..+..+
T Consensus 87 ~~~~~-------~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~ 159 (459)
T PLN02448 87 LEAVM-------TKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFP 159 (459)
T ss_pred HHHHH-------HHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCC
Confidence 11111 0111223344443 3679999996 88999999999999987743220 0 000000
Q ss_pred -------------Hhhhcc----chH--------HHHHHHHhhc---cccceeeecCCCCCCC--------CC-Cceeec
Q 002674 157 -------------VMAAGH----HHR--------SIVWQIAEDY---SHCEFLIRLPGYCPMP--------AF-RDVIDV 199 (894)
Q Consensus 157 -------------~~~~~~----~~~--------~i~~~l~~~y---~~~~~ll~~p~~~~~p--------~~-~~v~~v 199 (894)
++.... .+. ...+.+.... ..++.++..+++..-+ .+ .++..|
T Consensus 160 ~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~i 239 (459)
T PLN02448 160 VELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPI 239 (459)
T ss_pred CccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEe
Confidence 000000 000 0011111111 1122222222221001 11 245566
Q ss_pred Cccccc---C--c----c--ChHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hhHHhhCCCCcEEEEe--CCCC--CC
Q 002674 200 PLVVRR---L--H----K--SRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLVC--GASD--SQ 259 (894)
Q Consensus 200 p~~~~~---~--~----~--~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-~----~l~~~Ll~~~~~~vv~--G~~~--~~ 259 (894)
|+.... . . . ...++.+|+...+++++|||+|||.... . ++..+|...++.++++ +... .+
T Consensus 240 GP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~ 319 (459)
T PLN02448 240 GPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEASRLKE 319 (459)
T ss_pred cCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhH
Confidence 664321 0 0 1 1135678887666788999999997541 1 2333454556555543 2211 11
Q ss_pred -CCCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEcc--
Q 002674 260 -LPPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIR-- 331 (894)
Q Consensus 260 -lp~nv~v~g~~~~vp--~ll~~~d--~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~-~G~g~~~~~-- 331 (894)
.+.|+.+.+ |+| ++|+|.+ +||||||+||++|++++|||+|++| .+.||+.|++++++ .|+|+.+..
T Consensus 320 ~~~~~~~v~~---w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P--~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 320 ICGDMGLVVP---WCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFP--LFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred hccCCEEEec---cCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEecc--ccccchhhHHHHHHHhCceEEEeccc
Confidence 235777765 666 7998855 5999999999999999999999999 78999999999987 588888753
Q ss_pred ---CCCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 332 ---RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 332 ---~~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
..++.+.+++++++++.++. ......++.|..|.+.+.
T Consensus 395 ~~~~~~~~~~l~~av~~vl~~~~---~~~~~~r~~a~~~~~~~~ 435 (459)
T PLN02448 395 GEETLVGREEIAELVKRFMDLES---EEGKEMRRRAKELQEICR 435 (459)
T ss_pred ccCCcCcHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHHHHHH
Confidence 23577899999999996531 123356667777776654
No 38
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.83 E-value=2.7e-18 Score=197.68 Aligned_cols=333 Identities=14% Similarity=0.134 Sum_probs=189.7
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhc
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~ 101 (894)
++..+.||++|++.||+.|..+|+.|||++...... ......+.+.+..+ ..|+.............+..+..
T Consensus 13 vPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~-~~~~~~~~i~~~~i--p~glp~~~~~~~~~~~~~~~~~~---- 85 (451)
T PLN02410 13 VPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYF-SPSDDFTDFQFVTI--PESLPESDFKNLGPIEFLHKLNK---- 85 (451)
T ss_pred ECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccc-ccccCCCCeEEEeC--CCCCCcccccccCHHHHHHHHHH----
Confidence 578999999999999999999999999998754321 11111123333332 22332100000111111111111
Q ss_pred chHHhHHHHHHHH-h--cCCCcEEEECC-chhHHHHHHHhCCcEEEEecCc-hhH-HHH---HHH------h--------
Q 002674 102 PRKSILKDEVEWL-N--SIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WDF-IYA---EYV------M-------- 158 (894)
Q Consensus 102 ~~~~ll~~~~~~L-~--~~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~-~~~-~~~---~~~------~-------- 158 (894)
.....+...++-+ . .-+|++||+|+ .+|+..+|+.+|||.+.+...+ +.. .+. .+. +
T Consensus 86 ~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (451)
T PLN02410 86 ECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQ 165 (451)
T ss_pred HhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCc
Confidence 0111112222211 1 12469999997 8899999999999998874332 110 000 000 0
Q ss_pred -----hhcc----chH--------HHHHHHHh--hccccceeeecCCCCCC--------CCC-CceeecCccccc---Cc
Q 002674 159 -----AAGH----HHR--------SIVWQIAE--DYSHCEFLIRLPGYCPM--------PAF-RDVIDVPLVVRR---LH 207 (894)
Q Consensus 159 -----~~~~----~~~--------~i~~~l~~--~y~~~~~ll~~p~~~~~--------p~~-~~v~~vp~~~~~---~~ 207 (894)
.... .+. .+...+.. ....++.++..+++..- ... .++..||+.... +.
T Consensus 166 ~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~ 245 (451)
T PLN02410 166 NELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPT 245 (451)
T ss_pred cccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCc
Confidence 0000 000 00011110 01123333322222110 111 357778775321 11
Q ss_pred ---cChHHHHHHhCCCCCCcEEEEEcCCCCCh--hh---hHHhhCCC--CcEEEEe-CCC--CC---CCC--------CC
Q 002674 208 ---KSRKEVRKELGIEDDVKLLILNFGGQPAG--WK---LKEEYLPS--GWKCLVC-GAS--DS---QLP--------PN 263 (894)
Q Consensus 208 ---~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~---l~~~Ll~~--~~~~vv~-G~~--~~---~lp--------~n 263 (894)
....+..+||+..+++++|||+|||...- .+ +...|... .+.+++- +.. .. .+| +|
T Consensus 246 ~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~ 325 (451)
T PLN02410 246 SLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGR 325 (451)
T ss_pred cccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCC
Confidence 11123567887767788999999998652 22 33344333 3333332 210 01 133 55
Q ss_pred eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEccCCCCccc
Q 002674 264 FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDLLTGH 338 (894)
Q Consensus 264 v~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~-G~g~~~~~~~~~~~~ 338 (894)
..+. +|+| ++|+| +++||||||+||++|++++|||+|++| .+.||+.||+++++. |+|+.+. ..++.++
T Consensus 326 g~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~ 399 (451)
T PLN02410 326 GYIV---KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKP--FSSDQKVNARYLECVWKIGIQVE-GDLDRGA 399 (451)
T ss_pred eEEE---ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEecc--ccccCHHHHHHHHHHhCeeEEeC-CcccHHH
Confidence 5555 4777 79988 777999999999999999999999999 789999999999876 9999987 5788889
Q ss_pred HHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 339 WKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 339 l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
+.+++++++.++ .....++.|..|.+.+.
T Consensus 400 v~~av~~lm~~~-----~~~~~r~~a~~l~~~~~ 428 (451)
T PLN02410 400 VERAVKRLMVEE-----EGEEMRKRAISLKEQLR 428 (451)
T ss_pred HHHHHHHHHcCC-----cHHHHHHHHHHHHHHHH
Confidence 999999999665 23456666677766543
No 39
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.83 E-value=2.8e-18 Score=197.93 Aligned_cols=335 Identities=15% Similarity=0.150 Sum_probs=195.0
Q ss_pred ceEEEEEecCCCCcccHHHHHHHHHHHH-HCCCeEEEEeCCCCc--ccccccCCCceeEeeecc-CC-CcccccccccCH
Q 002674 14 KHLVFAYYVTGHGFGHATRVVEVVRNLI-SAGHDVHVVTGAPDF--VFTSEIQSPRLFIRKVLL-DC-GAVQADALTVDR 88 (894)
Q Consensus 14 ~~~~Il~~v~~~G~GHv~r~laLA~~L~-~~Gh~Vt~~~~~~~~--~~~~~i~~p~~~~~~~~~-d~-g~~~~~~~~~d~ 88 (894)
+|+.+ ++.+|.||++|++.||+.|. .+|+.|||++..... ........+.+.+..+.. +. |+... ..+.
T Consensus 6 pHVvl---~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~---~~~~ 79 (481)
T PLN02992 6 PHAAM---FSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDP---SAHV 79 (481)
T ss_pred cEEEE---eCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCC---CccH
Confidence 35444 57899999999999999998 789999999876421 111111112233322211 00 11100 0111
Q ss_pred HHHHHHHHHHhhcchHHhHHHHHHHHhc--CCCcEEEECC-chhHHHHHHHhCCcEEEEecCchh-HHHHHHH-------
Q 002674 89 LASLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD-FIYAEYV------- 157 (894)
Q Consensus 89 ~~~l~~~~~~~~~~~~~ll~~~~~~L~~--~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~~-~~~~~~~------- 157 (894)
. ..+... ...+.....++|++ .+|++||+|+ .+|+..+|+.+|||.+.+...+.. ..+..+.
T Consensus 80 ~---~~~~~~----~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~ 152 (481)
T PLN02992 80 V---TKIGVI----MREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDI 152 (481)
T ss_pred H---HHHHHH----HHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccc
Confidence 1 111111 11122333455554 3789999997 889999999999999887332210 0000000
Q ss_pred -------------hhhcc----chH------------HHHHHHHhhccccceeeecCCCCC-------CCC--------C
Q 002674 158 -------------MAAGH----HHR------------SIVWQIAEDYSHCEFLIRLPGYCP-------MPA--------F 193 (894)
Q Consensus 158 -------------~~~~~----~~~------------~i~~~l~~~y~~~~~ll~~p~~~~-------~p~--------~ 193 (894)
+.... ... .+..++ ..+..++.++..++... +.. .
T Consensus 153 ~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~ 231 (481)
T PLN02992 153 KEEHTVQRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHG-LAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVAR 231 (481)
T ss_pred ccccccCCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHH-HhcccCCEEEEechHHHhHHHHHHHhhccccccccC
Confidence 00000 000 000001 11222333332222210 000 1
Q ss_pred CceeecCccccc--CccChHHHHHHhCCCCCCcEEEEEcCCCCC-h-h---hhHHhhC--CCCcEEEEe----CC-----
Q 002674 194 RDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPA-G-W---KLKEEYL--PSGWKCLVC----GA----- 255 (894)
Q Consensus 194 ~~v~~vp~~~~~--~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~-~---~l~~~Ll--~~~~~~vv~----G~----- 255 (894)
.++..||++... ......++.+||.-.+++.+|||+|||... . . ++...|. +..+.+++- |.
T Consensus 232 ~~v~~VGPl~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~ 311 (481)
T PLN02992 232 VPVYPIGPLCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAY 311 (481)
T ss_pred CceEEecCccCCcCCCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCccccccccc
Confidence 357778876432 112234577888766677899999999865 2 2 2333342 334444442 10
Q ss_pred --------CC--C-CCCCC---------eEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCC
Q 002674 256 --------SD--S-QLPPN---------FIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFN 311 (894)
Q Consensus 256 --------~~--~-~lp~n---------v~v~g~~~~vp--~ll~~~d--~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~ 311 (894)
.. . .+|+| +.+.+ |+| ++|+|.. +||||||+||++|++++|||+|++| .+.
T Consensus 312 ~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~---W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P--~~~ 386 (481)
T PLN02992 312 FSANGGETRDNTPEYLPEGFVSRTHDRGFVVPS---WAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP--LFA 386 (481)
T ss_pred ccCcccccccchhhhCCHHHHHHhcCCCEEEee---cCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC--ccc
Confidence 01 1 15554 55554 666 7998855 6999999999999999999999999 789
Q ss_pred chHHHHHHH-HHcCcEEEEccC--CCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 312 EEPFLRNML-EFYQGGVEMIRR--DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 312 eq~~na~~l-~~~G~g~~~~~~--~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
||+.|++++ ++.|+|+.++.. .++.+.+.+++++++.++ .....++.|+.+.+.+.
T Consensus 387 DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~-----~g~~~r~~a~~~~~~a~ 445 (481)
T PLN02992 387 EQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEE-----EGEEMRRKVKKLRDTAE 445 (481)
T ss_pred hhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC-----chHHHHHHHHHHHHHHH
Confidence 999999999 499999999763 478889999999999664 23456666666666654
No 40
>PLN02562 UDP-glycosyltransferase
Probab=99.82 E-value=8e-18 Score=194.19 Aligned_cols=329 Identities=12% Similarity=0.090 Sum_probs=186.6
Q ss_pred ceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc-ccccccC-CCceeEeeeccCCCcccccccccCHHHH
Q 002674 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLAS 91 (894)
Q Consensus 14 ~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~-~~~~~i~-~p~~~~~~~~~d~g~~~~~~~~~d~~~~ 91 (894)
+|+.+ ++.++.||++|++.||+.|..+|++|||+++.... .....+. .+++.+..+ ..|.. +....+..
T Consensus 7 ~HVVl---vPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~l--p~g~~--~~~~~~~~-- 77 (448)
T PLN02562 7 PKIIL---VPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSI--SDGQD--DDPPRDFF-- 77 (448)
T ss_pred cEEEE---EcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEEC--CCCCC--CCccccHH--
Confidence 45555 57899999999999999999999999999865421 0111111 123333332 22221 10011111
Q ss_pred HHHHHHHhhcchHHhHHHHHHHHhcC---C-CcEEEECC-chhHHHHHHHhCCcEEEEecCchh--HHHH---H-----H
Q 002674 92 LEKYSETAVAPRKSILKDEVEWLNSI---K-ADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYA---E-----Y 156 (894)
Q Consensus 92 l~~~~~~~~~~~~~ll~~~~~~L~~~---~-PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~~~--~~~~---~-----~ 156 (894)
.+...+. ..+.....+++++. . +++||+|+ .+|+..+|+.+|||.+.+...+.. ..+. . +
T Consensus 78 --~l~~a~~---~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~ 152 (448)
T PLN02562 78 --SIENSME---NTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGL 152 (448)
T ss_pred --HHHHHHH---HhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccc
Confidence 1111110 01112223344432 2 38999997 889999999999999876332200 0000 0 0
Q ss_pred ---------------Hhhhcc----chH----------HHHHHHH---hhccccceeeecCCCCC-------------CC
Q 002674 157 ---------------VMAAGH----HHR----------SIVWQIA---EDYSHCEFLIRLPGYCP-------------MP 191 (894)
Q Consensus 157 ---------------~~~~~~----~~~----------~i~~~l~---~~y~~~~~ll~~p~~~~-------------~p 191 (894)
++..+. ... .....+. .....++.++..++... .|
T Consensus 153 ~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 232 (448)
T PLN02562 153 ISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNG 232 (448)
T ss_pred cccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccc
Confidence 000000 000 0011111 11112222322222210 12
Q ss_pred CCCceeecCcccccC-----c----cChHHHHHHhCCCCCCcEEEEEcCCCCC--hhhh----HHhhCCCCcEE--EEe-
Q 002674 192 AFRDVIDVPLVVRRL-----H----KSRKEVRKELGIEDDVKLLILNFGGQPA--GWKL----KEEYLPSGWKC--LVC- 253 (894)
Q Consensus 192 ~~~~v~~vp~~~~~~-----~----~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~--~~~l----~~~Ll~~~~~~--vv~- 253 (894)
..+++..||++.... . ....++.+|++-.+.+++|||+|||... +.+. ..++...+..+ ++.
T Consensus 233 ~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~ 312 (448)
T PLN02562 233 QNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNP 312 (448)
T ss_pred cCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 235678888763211 0 1122345788766667799999999652 3222 23343333333 332
Q ss_pred CCC--CCC-----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH
Q 002674 254 GAS--DSQ-----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF 322 (894)
Q Consensus 254 G~~--~~~-----lp~nv~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~ 322 (894)
+.. .+. +++|+.+.+ |+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.||+++++
T Consensus 313 ~~~~~l~~~~~~~~~~~~~v~~---w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~~~~ 387 (448)
T PLN02562 313 VWREGLPPGYVERVSKQGKVVS---WAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYP--VAGDQFVNCAYIVD 387 (448)
T ss_pred CchhhCCHHHHHHhccCEEEEe---cCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCC--cccchHHHHHHHHH
Confidence 111 111 356777764 666 79988 558999999999999999999999999 78999999999986
Q ss_pred -cCcEEEEccCCCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 323 -YQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 323 -~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
.|+|+.+. +++.+.+.+++++++.++ ..++.|..+.+.+
T Consensus 388 ~~g~g~~~~--~~~~~~l~~~v~~~l~~~--------~~r~~a~~l~~~~ 427 (448)
T PLN02562 388 VWKIGVRIS--GFGQKEVEEGLRKVMEDS--------GMGERLMKLRERA 427 (448)
T ss_pred HhCceeEeC--CCCHHHHHHHHHHHhCCH--------HHHHHHHHHHHHH
Confidence 58887774 577789999999998543 3445555555443
No 41
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.81 E-value=1.1e-17 Score=193.87 Aligned_cols=340 Identities=14% Similarity=0.135 Sum_probs=190.5
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-ccccc-CCCceeEeeeccC--CCcccccccccCH
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEI-QSPRLFIRKVLLD--CGAVQADALTVDR 88 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~-~~~~i-~~p~~~~~~~~~d--~g~~~~~~~~~d~ 88 (894)
.+|+.+ ++.++.||++|++.||+.|+.+|+.|||++...... ..... ..+.+.+..+... .++........+.
T Consensus 9 ~~HVvl---~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~~~~~~ 85 (477)
T PLN02863 9 GTHVLV---FPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVENVKDL 85 (477)
T ss_pred CCEEEE---ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCcChhhc
Confidence 345554 578999999999999999999999999998754211 11111 0122222221110 1111000000010
Q ss_pred H-HHHHHHHHHhhcchHHhHHHHHHHHhc--CCCcEEEECC-chhHHHHHHHhCCcEEEEecCc-hh-HHHHHH------
Q 002674 89 L-ASLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIYAEY------ 156 (894)
Q Consensus 89 ~-~~l~~~~~~~~~~~~~ll~~~~~~L~~--~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~-~~-~~~~~~------ 156 (894)
. .....+.. ..........++|++ .+|++||+|. .+|+..+|+.+|||.+.+...+ .. ..|..+
T Consensus 86 ~~~~~~~~~~----a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~ 161 (477)
T PLN02863 86 PPSGFPLMIH----ALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPT 161 (477)
T ss_pred chhhHHHHHH----HHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccc
Confidence 0 00001111 111222334455554 3679999996 8999999999999998873322 00 000000
Q ss_pred ---------------Hhhhcc----chH----------HHHHHHHhhc---cccceeeecCCCCC-------C-CCC--C
Q 002674 157 ---------------VMAAGH----HHR----------SIVWQIAEDY---SHCEFLIRLPGYCP-------M-PAF--R 194 (894)
Q Consensus 157 ---------------~~~~~~----~~~----------~i~~~l~~~y---~~~~~ll~~p~~~~-------~-p~~--~ 194 (894)
+|.... .+. .....+.... ..++.++..+++.. + ..+ .
T Consensus 162 ~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 241 (477)
T PLN02863 162 KINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHD 241 (477)
T ss_pred cccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCC
Confidence 000000 000 0000111111 11222222222210 0 111 3
Q ss_pred ceeecCcccccC--c-----------cChHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hhHHhhCCCCcEEEEe-CC
Q 002674 195 DVIDVPLVVRRL--H-----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLVC-GA 255 (894)
Q Consensus 195 ~v~~vp~~~~~~--~-----------~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-~----~l~~~Ll~~~~~~vv~-G~ 255 (894)
++..||+..... . ...+++.+|+...+++++|||+|||.... . ++...|...++.+++. +.
T Consensus 242 ~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~ 321 (477)
T PLN02863 242 RVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKE 321 (477)
T ss_pred CeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 577788753211 0 02346778888777789999999998642 1 2333454455554432 32
Q ss_pred C-C-----CCCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHH
Q 002674 256 S-D-----SQLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFL 316 (894)
Q Consensus 256 ~-~-----~~lp~n---------v~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~n 316 (894)
. . ..+|++ +.+.+ |+| ++|+| +++||||||+||++|++++|||+|++| .+.||+.|
T Consensus 322 ~~~~~~~~~~lp~~~~~r~~~~g~~v~~---w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~n 396 (477)
T PLN02863 322 PVNEESDYSNIPSGFEDRVAGRGLVIRG---WAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWP--MAADQFVN 396 (477)
T ss_pred CcccccchhhCCHHHHHHhccCCEEecC---CCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCC--ccccchhh
Confidence 1 1 114443 44444 666 78987 899999999999999999999999999 78999999
Q ss_pred HHHHH-HcCcEEEEccC---CCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 317 RNMLE-FYQGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 317 a~~l~-~~G~g~~~~~~---~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
+++++ ..|+|+.+... ..+.+++..++++++.. ....++.|..|.+.+
T Consensus 397 a~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~-------~~~~r~~a~~l~e~a 448 (477)
T PLN02863 397 ASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSE-------NQVERERAKELRRAA 448 (477)
T ss_pred HHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHH
Confidence 99976 57999988532 24567888888888732 245556666666654
No 42
>PLN03004 UDP-glycosyltransferase
Probab=99.81 E-value=1.7e-17 Score=190.39 Aligned_cols=165 Identities=13% Similarity=0.179 Sum_probs=115.3
Q ss_pred CceeecCcccccCc---c---ChHHHHHHhCCCCCCcEEEEEcCCCCC-hhh----hHHhhCCC--CcEEEEeCCC----
Q 002674 194 RDVIDVPLVVRRLH---K---SRKEVRKELGIEDDVKLLILNFGGQPA-GWK----LKEEYLPS--GWKCLVCGAS---- 256 (894)
Q Consensus 194 ~~v~~vp~~~~~~~---~---~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~~----l~~~Ll~~--~~~~vv~G~~---- 256 (894)
+++..|||+..... . ...++.+||+-.+++.+|||||||... ..+ +...|... .+.+++-...
T Consensus 235 ~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~ 314 (451)
T PLN03004 235 RNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEK 314 (451)
T ss_pred CCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccc
Confidence 35778888642111 1 113466888876678899999999865 222 23334333 3333433221
Q ss_pred ----CCC-CC---------CCeEECCCCCCHH--HHHhhcCE--EEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHH
Q 002674 257 ----DSQ-LP---------PNFIKLPKDAYTP--DFMAASDC--MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRN 318 (894)
Q Consensus 257 ----~~~-lp---------~nv~v~g~~~~vp--~ll~~~d~--~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~ 318 (894)
... +| .|+.+.+ |+| ++|+|+++ ||||||+||++|++++|||+|++| .+.||+.||+
T Consensus 315 ~~~~~~~~lp~gf~er~~~~g~~v~~---W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P--~~~DQ~~na~ 389 (451)
T PLN03004 315 TELDLKSLLPEGFLSRTEDKGMVVKS---WAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWP--LYAEQRFNRV 389 (451)
T ss_pred cccchhhhCChHHHHhccCCcEEEEe---eCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecc--ccccchhhHH
Confidence 111 44 5666654 666 79999776 999999999999999999999999 7899999999
Q ss_pred HHHH-cCcEEEEccC---CCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 319 MLEF-YQGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 319 ~l~~-~G~g~~~~~~---~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
++++ .|+|+.+... .++.+.+.+++++++.+ ...++.|..|.+.+
T Consensus 390 ~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~--------~~~r~~a~~~~~~a 438 (451)
T PLN03004 390 MIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE--------CPVRERTMAMKNAA 438 (451)
T ss_pred HHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC--------HHHHHHHHHHHHHH
Confidence 9975 6999999754 46788999999999854 23555555565543
No 43
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.80 E-value=1.5e-17 Score=187.57 Aligned_cols=324 Identities=17% Similarity=0.052 Sum_probs=192.8
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHH
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~ 95 (894)
|+|++...|.| ||..+++.++++|.++||+|++++...... ...+...++.+..+... +.. .......+...
T Consensus 2 ~~i~i~~~g~g-G~~~~~~~la~~L~~~g~ev~vv~~~~~~~-~~~~~~~g~~~~~~~~~-~~~-----~~~~~~~l~~~ 73 (357)
T PRK00726 2 KKILLAGGGTG-GHVFPALALAEELKKRGWEVLYLGTARGME-ARLVPKAGIEFHFIPSG-GLR-----RKGSLANLKAP 73 (357)
T ss_pred cEEEEEcCcch-HhhhHHHHHHHHHHhCCCEEEEEECCCchh-hhccccCCCcEEEEecc-CcC-----CCChHHHHHHH
Confidence 56666666666 999999999999999999999998754211 11111112222222110 100 00111111111
Q ss_pred HHHhhcchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHH
Q 002674 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (894)
Q Consensus 96 ~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~ 172 (894)
..+ ...+....+++++.+||+|+++. ...+.++++..++|+|.+....|...... +.
T Consensus 74 ~~~-----~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~r-----------~~---- 133 (357)
T PRK00726 74 FKL-----LKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAVPGLANK-----------LL---- 133 (357)
T ss_pred HHH-----HHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCCccHHHH-----------HH----
Confidence 111 12234557788999999999985 33345667788999987633211110000 00
Q ss_pred hhccccceeeecCCCCC-CCCCCce--eecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhH-Hh---h
Q 002674 173 EDYSHCEFLIRLPGYCP-MPAFRDV--IDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EE---Y 243 (894)
Q Consensus 173 ~~y~~~~~ll~~p~~~~-~p~~~~v--~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~-~~---L 243 (894)
|..++.++....... .....++ ++.|+...... +...++.++++++.++|++..|+.+.. ..++ +. +
T Consensus 134 --~~~~d~ii~~~~~~~~~~~~~~i~vi~n~v~~~~~~--~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 134 --ARFAKKVATAFPGAFPEFFKPKAVVTGNPVREEILA--LAAPPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred --HHHhchheECchhhhhccCCCCEEEECCCCChHhhc--ccchhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 111111111000000 0011233 33444322111 111223456655666666655554432 1222 32 2
Q ss_pred CCCCcEEEEeCCCCCC-------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCchH
Q 002674 244 LPSGWKCLVCGASDSQ-------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEEP 314 (894)
Q Consensus 244 l~~~~~~vv~G~~~~~-------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~--~~eq~ 314 (894)
......++++|.+..+ +.-++.+.+|.++++++|+.||++|+++|.++++|+|++|+|+|++|..+ ..+|.
T Consensus 210 ~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~ 289 (357)
T PRK00726 210 PEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQT 289 (357)
T ss_pred hhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHH
Confidence 1112345567876421 12237888998888999999999999999999999999999999999642 46788
Q ss_pred HHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc---------CCCCHHHHHHHHHHHHH
Q 002674 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (894)
Q Consensus 315 ~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l 371 (894)
.|++.+.+.|.|..+...+++++.+.++|+++++++..+. ....++.++++.|.+.+
T Consensus 290 ~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 290 ANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 9999999999999999888878999999999998764321 57888888888888764
No 44
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.80 E-value=2.1e-17 Score=192.67 Aligned_cols=166 Identities=17% Similarity=0.219 Sum_probs=113.1
Q ss_pred CceeecCccc--ccC-----ccChHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCCCCcEEEEe--CCC---
Q 002674 194 RDVIDVPLVV--RRL-----HKSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCLVC--GAS--- 256 (894)
Q Consensus 194 ~~v~~vp~~~--~~~-----~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~~~~~~vv~--G~~--- 256 (894)
+++..||++. ..+ ...+.++.+|+.-.+++++|||+|||... .. ++..+|...++.+++. +..
T Consensus 238 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~ 317 (481)
T PLN02554 238 PPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNI 317 (481)
T ss_pred CCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccc
Confidence 5678888862 111 12235688888766667899999999854 22 2333443344444332 210
Q ss_pred ---------C-CC-CCC--------CeEECCCCCCHH--HHHh--hcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCch
Q 002674 257 ---------D-SQ-LPP--------NFIKLPKDAYTP--DFMA--ASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE 313 (894)
Q Consensus 257 ---------~-~~-lp~--------nv~v~g~~~~vp--~ll~--~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq 313 (894)
. .. +|+ |..+. +|+| ++|+ ++++||||||+||++|++++|||+|++| .+.||
T Consensus 318 ~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~---~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P--~~~DQ 392 (481)
T PLN02554 318 MKEPPGEFTNLEEILPEGFLDRTKDIGKVI---GWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWP--LYAEQ 392 (481)
T ss_pred cccccccccchhhhCChHHHHHhccCceEE---eeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecC--ccccc
Confidence 0 01 344 34343 5777 7995 5888999999999999999999999999 78999
Q ss_pred HHHHH-HHHHcCcEEEEcc-----------CCCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 314 PFLRN-MLEFYQGGVEMIR-----------RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 314 ~~na~-~l~~~G~g~~~~~-----------~~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
+.||+ .++..|+|+.+.. ..++.+++.++|++++.+. ...++.|..+.+.+
T Consensus 393 ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~-------~~~r~~a~~l~~~~ 455 (481)
T PLN02554 393 KFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD-------SDVRKRVKEMSEKC 455 (481)
T ss_pred hhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHH
Confidence 99995 5789999999863 3577889999999998522 34455555555544
No 45
>PLN02207 UDP-glycosyltransferase
Probab=99.79 E-value=6.6e-17 Score=186.21 Aligned_cols=334 Identities=12% Similarity=0.083 Sum_probs=187.7
Q ss_pred cCCCCcccHHHHHHHHHHHHHCC--CeEEEEeCCCCc--ccccccC-----CCceeEeeeccCCCccccc-ccccCHHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAPDF--VFTSEIQ-----SPRLFIRKVLLDCGAVQAD-ALTVDRLAS 91 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~G--h~Vt~~~~~~~~--~~~~~i~-----~p~~~~~~~~~d~g~~~~~-~~~~d~~~~ 91 (894)
++..|.||++|++.+|+.|..+| ..|||++..... .....+. .+.+.+..+. .+...+. ....+....
T Consensus 9 ~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp--~~~~~~~~~~~~~~~~~ 86 (468)
T PLN02207 9 IPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVP--ELEEKPTLGGTQSVEAY 86 (468)
T ss_pred eCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeC--CCCCCCccccccCHHHH
Confidence 57899999999999999999998 899998765322 1111111 1234443332 1100000 001111111
Q ss_pred HHHHHHHhhcchHHhHHHHHHHHhcC----CC-cEEEECC-chhHHHHHHHhCCcEEEEecCc-hh-HHHHHH-------
Q 002674 92 LEKYSETAVAPRKSILKDEVEWLNSI----KA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIYAEY------- 156 (894)
Q Consensus 92 l~~~~~~~~~~~~~ll~~~~~~L~~~----~P-DlVV~D~-~~~a~~aA~~lgIP~V~isn~~-~~-~~~~~~------- 156 (894)
+ ................+++++. +| ++||+|. .+|+..+|+.+|||.+.+...+ .. ..+..+
T Consensus 87 ~---~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~ 163 (468)
T PLN02207 87 V---YDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKD 163 (468)
T ss_pred H---HHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccc
Confidence 1 1111001010111123334321 34 8999996 8899999999999998763222 00 000000
Q ss_pred -------------Hhhhccc---------------hHHHHHHHHhhccccceeeecCCCCC----------CCCCCceee
Q 002674 157 -------------VMAAGHH---------------HRSIVWQIAEDYSHCEFLIRLPGYCP----------MPAFRDVID 198 (894)
Q Consensus 157 -------------~~~~~~~---------------~~~i~~~l~~~y~~~~~ll~~p~~~~----------~p~~~~v~~ 198 (894)
+|..... ...+...+ .....++.++..++... .+..+++..
T Consensus 164 ~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~ 242 (468)
T PLN02207 164 TSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLA-ILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYA 242 (468)
T ss_pred cccCcCCCCCeEECCCCCCCCChHHCcchhcCCccHHHHHHHH-HhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEE
Confidence 0000000 00011111 11222333332222210 123356888
Q ss_pred cCcccc-cC--c-----cChHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCCCCcEE--EEeCCCC--C-CC
Q 002674 199 VPLVVR-RL--H-----KSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKC--LVCGASD--S-QL 260 (894)
Q Consensus 199 vp~~~~-~~--~-----~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~~~~~~--vv~G~~~--~-~l 260 (894)
||++.. .. . ...+++.+||+-.+++++|||||||... .. ++..+|...+..| ++-+... . .+
T Consensus 243 VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~l 322 (468)
T PLN02207 243 VGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLL 322 (468)
T ss_pred ecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccC
Confidence 888642 11 1 1124678888876677899999999765 22 2333443344433 3332211 1 13
Q ss_pred C--------CCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEE
Q 002674 261 P--------PNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGV 327 (894)
Q Consensus 261 p--------~nv~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~-~G~g~ 327 (894)
| +|..+. +|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.|++++++ .|+|+
T Consensus 323 p~~f~er~~~~g~i~---~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~~~~~~gvGv 397 (468)
T PLN02207 323 PEGFLDRVSGRGMIC---GWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWP--MYAEQQLNAFLMVKELKLAV 397 (468)
T ss_pred CHHHHhhcCCCeEEE---EeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecC--ccccchhhHHHHHHHhCceE
Confidence 3 444444 4777 79988 677999999999999999999999999 78999999998876 89998
Q ss_pred EEcc------C-CCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 328 EMIR------R-DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 328 ~~~~------~-~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
.+.. . -++.+++.++|++++.+ .....++.|..|.+.+.
T Consensus 398 ~~~~~~~~~~~~~v~~e~i~~av~~vm~~------~~~~~r~~a~~l~~~a~ 443 (468)
T PLN02207 398 ELKLDYRVHSDEIVNANEIETAIRCVMNK------DNNVVRKRVMDISQMIQ 443 (468)
T ss_pred EEecccccccCCcccHHHHHHHHHHHHhc------chHHHHHHHHHHHHHHH
Confidence 7632 1 24678999999999952 12455666666666543
No 46
>PLN02555 limonoid glucosyltransferase
Probab=99.79 E-value=7.7e-17 Score=186.43 Aligned_cols=339 Identities=17% Similarity=0.119 Sum_probs=188.1
Q ss_pred ceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc-cccc--cc-C-------CCceeEeeeccCCCccccc
Q 002674 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTS--EI-Q-------SPRLFIRKVLLDCGAVQAD 82 (894)
Q Consensus 14 ~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~-~~~~--~i-~-------~p~~~~~~~~~d~g~~~~~ 82 (894)
+|+.+ ++.++.||++|++.+|+.|..+|..|||++..... .... .+ . .+.+.+..+ +.|+....
T Consensus 8 ~HVv~---~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~--pdglp~~~ 82 (480)
T PLN02555 8 VHVML---VSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFF--EDGWAEDD 82 (480)
T ss_pred CEEEE---ECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeC--CCCCCCCc
Confidence 45554 57889999999999999999999999999876411 1110 00 0 011233321 22332110
Q ss_pred ccccCHHHHHHHHHHHhhcchHHhHHHHHHHHh-cCCC-cEEEECC-chhHHHHHHHhCCcEEEEecCch--hHHHHHH-
Q 002674 83 ALTVDRLASLEKYSETAVAPRKSILKDEVEWLN-SIKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSW--DFIYAEY- 156 (894)
Q Consensus 83 ~~~~d~~~~l~~~~~~~~~~~~~ll~~~~~~L~-~~~P-DlVV~D~-~~~a~~aA~~lgIP~V~isn~~~--~~~~~~~- 156 (894)
....+....+..+.. ....-+.+.++.+. .-+| ++||+|. .+|+..+|+.+|||.+.+...+. ...+..+
T Consensus 83 ~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~ 158 (480)
T PLN02555 83 PRRQDLDLYLPQLEL----VGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY 158 (480)
T ss_pred ccccCHHHHHHHHHH----hhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh
Confidence 001111111111110 11111222222222 1245 9999996 88999999999999987622210 0011000
Q ss_pred -----------------Hhhhcc----c----------hHHHHHHHHh---hccccceeeecCCCCC-------CCCCCc
Q 002674 157 -----------------VMAAGH----H----------HRSIVWQIAE---DYSHCEFLIRLPGYCP-------MPAFRD 195 (894)
Q Consensus 157 -----------------~~~~~~----~----------~~~i~~~l~~---~y~~~~~ll~~p~~~~-------~p~~~~ 195 (894)
+|..+. . ...+...+.. ....++.++..++... +.....
T Consensus 159 ~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~ 238 (480)
T PLN02555 159 HGLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP 238 (480)
T ss_pred hcCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC
Confidence 000000 0 0011111111 1122223332232211 101113
Q ss_pred eeecCccccc---C-c-------cChHHHHHHhCCCCCCcEEEEEcCCCCC-h-h---hhHHhhCCCCcEEEEe-CC---
Q 002674 196 VIDVPLVVRR---L-H-------KSRKEVRKELGIEDDVKLLILNFGGQPA-G-W---KLKEEYLPSGWKCLVC-GA--- 255 (894)
Q Consensus 196 v~~vp~~~~~---~-~-------~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~-~---~l~~~Ll~~~~~~vv~-G~--- 255 (894)
+..+|++... . . ....++.+||.-.+++++|||+|||... . . ++...+...+..|++. ..
T Consensus 239 v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~ 318 (480)
T PLN02555 239 IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHK 318 (480)
T ss_pred EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcc
Confidence 6778775321 0 0 1124577788766667799999999765 2 1 2333444444444432 21
Q ss_pred -C-C-C-CC--------CCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH
Q 002674 256 -S-D-S-QL--------PPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (894)
Q Consensus 256 -~-~-~-~l--------p~nv~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~ 319 (894)
. . . .+ ++|..+. +|+| ++|+| +++||||||+||++||+++|||+|++| .+.||+.|+++
T Consensus 319 ~~~~~~~~lp~~~~~~~~~~g~v~---~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P--~~~DQ~~Na~~ 393 (480)
T PLN02555 319 DSGVEPHVLPEEFLEKAGDKGKIV---QWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFP--QWGDQVTDAVY 393 (480)
T ss_pred cccchhhcCChhhhhhcCCceEEE---ecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCC--CccccHHHHHH
Confidence 0 1 0 12 3455555 4666 68865 999999999999999999999999999 78999999999
Q ss_pred HHHc-CcEEEEc-----cCCCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 320 LEFY-QGGVEMI-----RRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 320 l~~~-G~g~~~~-----~~~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
+++. |+|+.+. ...++.+++..++++++.++ .....++-|..|.+.+
T Consensus 394 ~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~-----~g~~~r~ra~~l~~~a 446 (480)
T PLN02555 394 LVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGE-----KAAELKQNALKWKEEA 446 (480)
T ss_pred HHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHH
Confidence 9876 9999993 33577789999999998654 2234445555555543
No 47
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.79 E-value=2.6e-17 Score=184.89 Aligned_cols=300 Identities=18% Similarity=0.108 Sum_probs=177.6
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHH
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~ 97 (894)
|++.. +...||+.++..++++|.++||+|++++....... ..+...++.+..+... +.. .......+..+..
T Consensus 2 ~~~~~-~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~ 73 (350)
T cd03785 2 ILIAG-GGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-RLVPKAGIPLHTIPVG-GLR-----RKGSLKKLKAPFK 73 (350)
T ss_pred EEEEe-cCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-hcccccCCceEEEEec-CcC-----CCChHHHHHHHHH
Confidence 43343 44469999999999999999999999986532111 1111111222221110 000 0000011111111
Q ss_pred HhhcchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhh
Q 002674 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAED 174 (894)
Q Consensus 98 ~~~~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 174 (894)
+ ...+....+++++++||+|+++. .+.+.++|+..++|++......|.... ..+ .
T Consensus 74 ~-----~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~~---------------~~~--~ 131 (350)
T cd03785 74 L-----LKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGLA---------------NRL--L 131 (350)
T ss_pred H-----HHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccHH---------------HHH--H
Confidence 1 11234456778999999999875 334566788889999875322211110 000 1
Q ss_pred ccccceeeecCCCCC--CCCCCce--eecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhH-H---hhC
Q 002674 175 YSHCEFLIRLPGYCP--MPAFRDV--IDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYL 244 (894)
Q Consensus 175 y~~~~~ll~~p~~~~--~p~~~~v--~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~-~---~Ll 244 (894)
+..++.++....... .+. .++ ++.|......... ..++++++++++++|++..|+.+.. .+++ + .+.
T Consensus 132 ~~~~~~vi~~s~~~~~~~~~-~~~~~i~n~v~~~~~~~~--~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~ 208 (350)
T cd03785 132 ARFADRVALSFPETAKYFPK-DKAVVTGNPVREEILALD--RERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL 208 (350)
T ss_pred HHhhCEEEEcchhhhhcCCC-CcEEEECCCCchHHhhhh--hhHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh
Confidence 111233222111100 111 233 3333322211111 1266777777777777766666543 2232 2 232
Q ss_pred CCCcEE-EEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCch
Q 002674 245 PSGWKC-LVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEE 313 (894)
Q Consensus 245 ~~~~~~-vv~G~~~~~--------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~--~~eq 313 (894)
..++.+ +++|.+..+ +.+|+++.++.++++++|+.||++|+++|.+|++|||++|+|+|++|.+. ..+|
T Consensus 209 ~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~ 288 (350)
T cd03785 209 RKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQ 288 (350)
T ss_pred ccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcH
Confidence 245554 456766321 23689999998889999999999999999999999999999999998654 4678
Q ss_pred HHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 314 PFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 314 ~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
..|++.+.+.|.|+.++..+.+.+.+.++|+++++++
T Consensus 289 ~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 289 TANARALVKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred HHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 8899999999999999876556789999999998655
No 48
>PLN00164 glucosyltransferase; Provisional
Probab=99.79 E-value=5.5e-17 Score=188.65 Aligned_cols=339 Identities=12% Similarity=0.089 Sum_probs=191.6
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCC----CeEEEEeCCCCcc-----cccccC-----CCceeEeeeccCCCc
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG----HDVHVVTGAPDFV-----FTSEIQ-----SPRLFIRKVLLDCGA 78 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~G----h~Vt~~~~~~~~~-----~~~~i~-----~p~~~~~~~~~d~g~ 78 (894)
|++.+|++ ++.++.||++|++.||+.|..+| +.|||++...... ....+. .+.+.+..+ ..+.
T Consensus 1 ~~~~HVVl-vPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l--p~~~ 77 (480)
T PLN00164 1 MAAPTVVL-LPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHL--PAVE 77 (480)
T ss_pred CCCCEEEE-eCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEEC--CCCC
Confidence 33344433 57889999999999999999986 7899987643211 111110 012333332 2121
Q ss_pred ccccccccCHHHHHHHHHHHhhcchHHhHHHHHHHHhcC--CCcEEEECC-chhHHHHHHHhCCcEEEEecCc-hh-HHH
Q 002674 79 VQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIY 153 (894)
Q Consensus 79 ~~~~~~~~d~~~~l~~~~~~~~~~~~~ll~~~~~~L~~~--~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~-~~-~~~ 153 (894)
...+ ..+....+ ..+. ........++|++. .+++||+|+ .+|+..+|+.+|||.+.+...+ .. ..+
T Consensus 78 ~p~~--~e~~~~~~---~~~~----~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~ 148 (480)
T PLN00164 78 PPTD--AAGVEEFI---SRYI----QLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALM 148 (480)
T ss_pred CCCc--cccHHHHH---HHHH----HhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 1100 00111111 1111 11122334455543 459999996 8899999999999998873222 00 000
Q ss_pred HHH-------------------Hhh--------hcc-----c---hHHHHHHHHhhccccceeeecCCCCC-------C-
Q 002674 154 AEY-------------------VMA--------AGH-----H---HRSIVWQIAEDYSHCEFLIRLPGYCP-------M- 190 (894)
Q Consensus 154 ~~~-------------------~~~--------~~~-----~---~~~i~~~l~~~y~~~~~ll~~p~~~~-------~- 190 (894)
..+ +|. .+. . +..+.... .....++.++..++... +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~~~ 227 (480)
T PLN00164 149 LRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHG-RRFMEAAGIIVNTAAELEPGVLAAIA 227 (480)
T ss_pred hhhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHH-HhhhhcCEEEEechHHhhHHHHHHHH
Confidence 000 000 000 0 00111111 11222333332222210 0
Q ss_pred -----CC--CCceeecCccccc---C--ccChHHHHHHhCCCCCCcEEEEEcCCCCCh--h---hhHHhhCCCCcEE--E
Q 002674 191 -----PA--FRDVIDVPLVVRR---L--HKSRKEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGWKC--L 251 (894)
Q Consensus 191 -----p~--~~~v~~vp~~~~~---~--~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~---~l~~~Ll~~~~~~--v 251 (894)
+. .+++..||++... + ....+++.+||.-.+.+++|||+|||.... . ++..+|...+..| +
T Consensus 228 ~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv 307 (480)
T PLN00164 228 DGRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWV 307 (480)
T ss_pred hccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 00 1467788886421 1 122356778888767788999999997542 2 2333443334333 3
Q ss_pred EeCCCC-----------C-CCCCC---------eEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEe
Q 002674 252 VCGASD-----------S-QLPPN---------FIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 252 v~G~~~-----------~-~lp~n---------v~v~g~~~~vp--~ll~~~d--~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
+-.... . .+|+| +.+. .|+| ++|+|.+ +||||||+||++|++++|||+|++|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~---~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P 384 (480)
T PLN00164 308 LRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWP---TWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWP 384 (480)
T ss_pred EcCCcccccccccccchhhhCChHHHHHhcCCCeEEe---ecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCC
Confidence 322110 0 14555 3333 4777 7999855 8999999999999999999999999
Q ss_pred CCCCCchHHHHHHHH-HcCcEEEEccC-----CCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 307 RDYFNEEPFLRNMLE-FYQGGVEMIRR-----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 307 ~~~~~eq~~na~~l~-~~G~g~~~~~~-----~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
.+.||+.|+++++ ..|+|+.+..+ .++.+.+..+|++++.+.. + .....++-|..|.+.+.
T Consensus 385 --~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~-~--~~~~~r~~a~~~~~~~~ 451 (480)
T PLN00164 385 --LYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGE-E--EGRKAREKAAEMKAACR 451 (480)
T ss_pred --ccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCc-h--hHHHHHHHHHHHHHHHH
Confidence 7899999998875 58999988532 2577899999999996541 1 12456666666666553
No 49
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.77 E-value=1e-16 Score=186.66 Aligned_cols=151 Identities=15% Similarity=0.213 Sum_probs=107.2
Q ss_pred CceeecCcccc-cC----c---cChHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCCCCcEEEEe-CCC-C-
Q 002674 194 RDVIDVPLVVR-RL----H---KSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCLVC-GAS-D- 257 (894)
Q Consensus 194 ~~v~~vp~~~~-~~----~---~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~~~~~~vv~-G~~-~- 257 (894)
+++..||++.. .. . ....++.+|+.-.+.+++|||+|||... .. ++...|...++.++++ +.. .
T Consensus 243 p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~ 322 (475)
T PLN02167 243 PPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAE 322 (475)
T ss_pred CeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCccc
Confidence 46778887532 11 1 1224677888876677899999999854 21 2333444445554432 211 1
Q ss_pred -----CCCCCCe--------EECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH-
Q 002674 258 -----SQLPPNF--------IKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM- 319 (894)
Q Consensus 258 -----~~lp~nv--------~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~- 319 (894)
..+|+|+ .+. .|+| ++|+| +++||||||+||++|++++|||+|++| .+.||+.|+++
T Consensus 323 ~~~~~~~lp~~~~er~~~rg~v~---~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~~ 397 (475)
T PLN02167 323 YASPYEPLPEGFMDRVMGRGLVC---GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWP--MYAEQQLNAFTM 397 (475)
T ss_pred ccchhhhCChHHHHHhccCeeee---ccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecc--ccccchhhHHHH
Confidence 1156653 233 5777 68987 779999999999999999999999999 78999999976
Q ss_pred HHHcCcEEEEccC-------CCCcccHHHHHHHHHhc
Q 002674 320 LEFYQGGVEMIRR-------DLLTGHWKPYLERAISL 349 (894)
Q Consensus 320 l~~~G~g~~~~~~-------~~~~~~l~~~l~~ll~~ 349 (894)
++..|+|+.+... .++.+.+.+++++++.+
T Consensus 398 ~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 398 VKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred HHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC
Confidence 6789999988642 45778999999999854
No 50
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.77 E-value=1.7e-16 Score=182.47 Aligned_cols=332 Identities=16% Similarity=0.149 Sum_probs=182.9
Q ss_pred cCCCCcccHHHHHHHHHHHHH-CCCeEEEEeCCCCcccccccC----CCceeEeeeccCCCccccc-ccccCHHHHHHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLIS-AGHDVHVVTGAPDFVFTSEIQ----SPRLFIRKVLLDCGAVQAD-ALTVDRLASLEKY 95 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~-~Gh~Vt~~~~~~~~~~~~~i~----~p~~~~~~~~~d~g~~~~~-~~~~d~~~~l~~~ 95 (894)
++.+|.||++|++.||+.|.. +|+.|||++...... +..+. .+.+.+..+ ..|+.... ....+....+...
T Consensus 9 ~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~-~~~~~~~~~~~~i~~~~i--~dglp~g~~~~~~~~~~~~~~~ 85 (455)
T PLN02152 9 VTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIH-RSMIPNHNNVENLSFLTF--SDGFDDGVISNTDDVQNRLVNF 85 (455)
T ss_pred ecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhh-hhhhccCCCCCCEEEEEc--CCCCCCccccccccHHHHHHHH
Confidence 578899999999999999996 699999998753211 11111 123444443 22332110 0011111111111
Q ss_pred HHHhhcchHHhHHHHHHHHh-cCC-CcEEEECC-chhHHHHHHHhCCcEEEEecCc-hh-HHHHHH---------Hhhhc
Q 002674 96 SETAVAPRKSILKDEVEWLN-SIK-ADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIYAEY---------VMAAG 161 (894)
Q Consensus 96 ~~~~~~~~~~ll~~~~~~L~-~~~-PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~-~~-~~~~~~---------~~~~~ 161 (894)
.. .....+.+.++-+. .-+ +++||+|. .+|+..+|+.+|||.+.+...+ .. ..+..+ +|..+
T Consensus 86 ~~----~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~iPglp 161 (455)
T PLN02152 86 ER----NGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNSVFEFPNLP 161 (455)
T ss_pred HH----hccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCCCeeecCCCC
Confidence 11 11112222222221 113 49999996 8899999999999998773322 00 011111 11000
Q ss_pred c----ch----------H---HHHHHHHhhccc--cceeeecCCCCCC----CCC--CceeecCccccc----Cc-----
Q 002674 162 H----HH----------R---SIVWQIAEDYSH--CEFLIRLPGYCPM----PAF--RDVIDVPLVVRR----LH----- 207 (894)
Q Consensus 162 ~----~~----------~---~i~~~l~~~y~~--~~~ll~~p~~~~~----p~~--~~v~~vp~~~~~----~~----- 207 (894)
. .+ . ....+....... ++.++..+++..- ..+ .++..|||+... ..
T Consensus 162 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~v~~VGPL~~~~~~~~~~~~~~ 241 (455)
T PLN02152 162 SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNIEMVAVGPLLPAEIFTGSESGKD 241 (455)
T ss_pred CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcCCEEEEcccCccccccccccCcc
Confidence 0 00 0 000011111111 1233333332110 011 257778876321 00
Q ss_pred ----cChHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCC--CCcEEEEeCCC--------CC--C-------
Q 002674 208 ----KSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLP--SGWKCLVCGAS--------DS--Q------- 259 (894)
Q Consensus 208 ----~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~--~~~~~vv~G~~--------~~--~------- 259 (894)
....++.+||+..+++++|||+|||... .. ++...|.. ..+.+++.++. .. .
T Consensus 242 ~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f 321 (455)
T PLN02152 242 LSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGF 321 (455)
T ss_pred ccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhH
Confidence 1123577888876778999999999765 22 23334432 33344443210 00 0
Q ss_pred ---CCCCeEECCCCCCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEc-
Q 002674 260 ---LPPNFIKLPKDAYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMI- 330 (894)
Q Consensus 260 ---lp~nv~v~g~~~~vp--~ll~~~--d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~-~G~g~~~~- 330 (894)
.++|..+. .|+| ++|+|. .+||||||+||++|++++|||+|++| .+.||+.||+++++ .|.|+.+.
T Consensus 322 ~e~~~~~g~v~---~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~~~~G~~~~~ 396 (455)
T PLN02152 322 RHELEEVGMIV---SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFP--MWSDQPANAKLLEEIWKTGVRVRE 396 (455)
T ss_pred HHhccCCeEEE---eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEecc--ccccchHHHHHHHHHhCceEEeec
Confidence 23444444 4777 799885 47999999999999999999999999 78999999999987 35555543
Q ss_pred -cCC-CCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 331 -RRD-LLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 331 -~~~-~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
.++ ++.+++.++++++++++ ....++-|..|.+.+
T Consensus 397 ~~~~~~~~e~l~~av~~vm~~~------~~~~r~~a~~~~~~~ 433 (455)
T PLN02152 397 NSEGLVERGEIRRCLEAVMEEK------SVELRESAEKWKRLA 433 (455)
T ss_pred CcCCcCcHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHH
Confidence 333 47789999999999643 123455555555443
No 51
>PLN02534 UDP-glycosyltransferase
Probab=99.76 E-value=3.2e-16 Score=181.59 Aligned_cols=337 Identities=12% Similarity=0.080 Sum_probs=187.5
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcc-cccccC---C--CceeEeeeccC---CCcccc-cc-cccCHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ---S--PRLFIRKVLLD---CGAVQA-DA-LTVDRLA 90 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~-~~~~i~---~--p~~~~~~~~~d---~g~~~~-~~-~~~d~~~ 90 (894)
++.++.||++|++.||+.|..+|+.|||++...... ....+. . ..+.+..+... .|+... .. .......
T Consensus 14 vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~~~~~~~ 93 (491)
T PLN02534 14 IPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLDTLPSRD 93 (491)
T ss_pred ECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccccCCcHH
Confidence 578999999999999999999999999998654211 111110 0 12344433211 133211 00 0011111
Q ss_pred HHHHHHHHhhcchHHhHHHHHHHHhc--CCCcEEEECC-chhHHHHHHHhCCcEEEEecCc---hhHH---HHH--H---
Q 002674 91 SLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFI---YAE--Y--- 156 (894)
Q Consensus 91 ~l~~~~~~~~~~~~~ll~~~~~~L~~--~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~~---~~~~---~~~--~--- 156 (894)
.+..+.. ....+.....++|++ .+|++||+|+ .+|+..+|+.+|||.+.+...+ .... +.. +
T Consensus 94 ~~~~~~~----~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~ 169 (491)
T PLN02534 94 LLRKFYD----AVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSV 169 (491)
T ss_pred HHHHHHH----HHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccC
Confidence 1222211 111222344556654 3579999997 8899999999999998773221 1100 000 0
Q ss_pred --------Hhhhcc-----------------chHHHHHHHHhhccccceeeecCCCCC-------CC-CC-CceeecCcc
Q 002674 157 --------VMAAGH-----------------HHRSIVWQIAEDYSHCEFLIRLPGYCP-------MP-AF-RDVIDVPLV 202 (894)
Q Consensus 157 --------~~~~~~-----------------~~~~i~~~l~~~y~~~~~ll~~p~~~~-------~p-~~-~~v~~vp~~ 202 (894)
++..+. ....+...+......++.++..++... +. .+ .++..|||+
T Consensus 170 ~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL 249 (491)
T PLN02534 170 SSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPV 249 (491)
T ss_pred CCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcc
Confidence 000000 000111111111111222222222211 01 11 357788876
Q ss_pred ccc----------Cc---cChHHHHHHhCCCCCCcEEEEEcCCCCC--hhhh---HHhhCC--CCcEEEEeCCC--C---
Q 002674 203 VRR----------LH---KSRKEVRKELGIEDDVKLLILNFGGQPA--GWKL---KEEYLP--SGWKCLVCGAS--D--- 257 (894)
Q Consensus 203 ~~~----------~~---~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~--~~~l---~~~Ll~--~~~~~vv~G~~--~--- 257 (894)
... .. ....++.+||.-.+++++|||+|||... +.++ ...|.. ..+.+++-.+. .
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~ 329 (491)
T PLN02534 250 SLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELE 329 (491)
T ss_pred cccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchh
Confidence 321 00 0223567888877778999999999865 2232 233433 33344443111 0
Q ss_pred C-CC---------CCCeEECCCCCCHH--HHHhhcCE--EEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH-H
Q 002674 258 S-QL---------PPNFIKLPKDAYTP--DFMAASDC--MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-F 322 (894)
Q Consensus 258 ~-~l---------p~nv~v~g~~~~vp--~ll~~~d~--~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~-~ 322 (894)
. .+ +.|+.+. .|+| ++|+|.++ ||||||+||++||+++|+|+|++| .+.||+.|+++++ .
T Consensus 330 ~~~~p~gf~~~~~~~g~~v~---~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P--~~~dq~~na~~~~e~ 404 (491)
T PLN02534 330 EWLVKENFEERIKGRGLLIK---GWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWP--LFAEQFLNEKLIVEV 404 (491)
T ss_pred hhcCchhhHHhhccCCeecc---CCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecc--ccccHHHHHHHHHHh
Confidence 0 12 2344433 4777 79988655 999999999999999999999999 7899999999886 6
Q ss_pred cCcEEEEcc---------C----CCCcccHHHHHHHHHhc-CCCccCCCCHHHHHHHHHHHHH
Q 002674 323 YQGGVEMIR---------R----DLLTGHWKPYLERAISL-KPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 323 ~G~g~~~~~---------~----~~~~~~l~~~l~~ll~~-~~~~~~~~~g~~~~A~~i~~~l 371 (894)
.|+|+.+.. + -++.+++..++++++.. .+ .....++-|..|.+.+
T Consensus 405 ~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~e----eg~~~R~rA~elk~~a 463 (491)
T PLN02534 405 LRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGE----EGERRRRRAQELGVMA 463 (491)
T ss_pred hcceEEecccccccccccccccCccCHHHHHHHHHHHhccccc----cHHHHHHHHHHHHHHH
Confidence 788887731 1 25678899999999852 11 2234455566666554
No 52
>PLN03015 UDP-glucosyl transferase
Probab=99.74 E-value=1.3e-15 Score=175.07 Aligned_cols=334 Identities=14% Similarity=0.152 Sum_probs=186.7
Q ss_pred cCCCCcccHHHHHHHHHHHHHC-CCeEEEEeCCCCc-cc--ccccCC----CceeEeeeccCCCccccccc-ccCHHHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDF-VF--TSEIQS----PRLFIRKVLLDCGAVQADAL-TVDRLASL 92 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~-Gh~Vt~~~~~~~~-~~--~~~i~~----p~~~~~~~~~d~g~~~~~~~-~~d~~~~l 92 (894)
++.+|.||++|++.||+.|+.+ |..|||++..... .. ...+.. +.+.+..+ ..+.. +.+ ..+. ...
T Consensus 9 ~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l--p~~~~--~~l~~~~~-~~~ 83 (470)
T PLN03015 9 VASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEI--PSVDV--DNLVEPDA-TIF 83 (470)
T ss_pred ECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEEC--CCCcc--ccCCCCCc-cHH
Confidence 5789999999999999999977 9999998655321 11 111110 12333322 11110 011 0000 011
Q ss_pred HHHHHHhhcchHHhHHHHHHHHhcC--CCcEEEECC-chhHHHHHHHhCCcE-EEEecCc-hhH-HHHH------H----
Q 002674 93 EKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIRS-VCVTNFS-WDF-IYAE------Y---- 156 (894)
Q Consensus 93 ~~~~~~~~~~~~~ll~~~~~~L~~~--~PDlVV~D~-~~~a~~aA~~lgIP~-V~isn~~-~~~-~~~~------~---- 156 (894)
..+.... ..+.....++|++. +|++||+|. .+|+..+|+.+|||. +.+...+ +.. .+.. .
T Consensus 84 ~~~~~~~----~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~ 159 (470)
T PLN03015 84 TKMVVKM----RAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGE 159 (470)
T ss_pred HHHHHHH----HhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccc
Confidence 1111111 11222334555543 689999996 889999999999994 5542111 000 0000 0
Q ss_pred ---------Hhhhcc----chH--------HHHHHHHh---hccccceeeecCCCCC-------CCC--------CCcee
Q 002674 157 ---------VMAAGH----HHR--------SIVWQIAE---DYSHCEFLIRLPGYCP-------MPA--------FRDVI 197 (894)
Q Consensus 157 ---------~~~~~~----~~~--------~i~~~l~~---~y~~~~~ll~~p~~~~-------~p~--------~~~v~ 197 (894)
+|.... .+. .....+.. ....++.++..++... +.. .+++.
T Consensus 160 ~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~ 239 (470)
T PLN03015 160 YVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVY 239 (470)
T ss_pred cCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceE
Confidence 000000 000 00000111 1222333332222210 111 13477
Q ss_pred ecCccccc--CccChHHHHHHhCCCCCCcEEEEEcCCCCC-hh----hhHHhhCCC--CcEEEEeCC-----------C-
Q 002674 198 DVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPS--GWKCLVCGA-----------S- 256 (894)
Q Consensus 198 ~vp~~~~~--~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~~----~l~~~Ll~~--~~~~vv~G~-----------~- 256 (894)
.|||+... ......++.+||+-.+.+++|||+|||... .. ++...|... .+.+++-.+ .
T Consensus 240 ~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~ 319 (470)
T PLN03015 240 PIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQ 319 (470)
T ss_pred EecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccc
Confidence 88876421 112234688898876778999999999865 21 233344333 334444211 0
Q ss_pred CC-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH-H
Q 002674 257 DS-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML-E 321 (894)
Q Consensus 257 ~~-~lp~n---------v~v~g~~~~vp--~ll~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l-~ 321 (894)
.. .+|+| +.+. .|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.|++++ +
T Consensus 320 ~~~~lp~~f~er~~~rGl~v~---~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P--~~~DQ~~na~~~~~ 394 (470)
T PLN03015 320 VSASLPEGFLDRTRGVGLVVT---QWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP--LYAEQWMNATLLTE 394 (470)
T ss_pred hhhcCChHHHHhhccCceEEE---ecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc--cccchHHHHHHHHH
Confidence 11 25666 3333 4777 78887 677999999999999999999999999 789999999998 6
Q ss_pred HcCcEEEEc----cCCCCcccHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHHc
Q 002674 322 FYQGGVEMI----RRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 322 ~~G~g~~~~----~~~~~~~~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (894)
..|+|+.+. ...++.+.+..+|++++.... ......++-|..|.+.+.
T Consensus 395 ~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~---eeg~~~R~ra~~lk~~a~ 446 (470)
T PLN03015 395 EIGVAVRTSELPSEKVIGREEVASLVRKIVAEED---EEGQKIRAKAEEVRVSSE 446 (470)
T ss_pred HhCeeEEecccccCCccCHHHHHHHHHHHHccCc---ccHHHHHHHHHHHHHHHH
Confidence 789999985 224677899999999984210 022345555666666543
No 53
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.74 E-value=2.4e-16 Score=180.19 Aligned_cols=243 Identities=16% Similarity=0.135 Sum_probs=154.3
Q ss_pred HHHHHHHhcCCCcEEEECCchhHHHHH---HHhCCcEEEE-ecCc----hhHHH-HHHHhhhccchHHHHHHHHhhcccc
Q 002674 108 KDEVEWLNSIKADLVVSDVVPVACRAA---ADAGIRSVCV-TNFS----WDFIY-AEYVMAAGHHHRSIVWQIAEDYSHC 178 (894)
Q Consensus 108 ~~~~~~L~~~~PDlVV~D~~~~a~~aA---~~lgIP~V~i-sn~~----~~~~~-~~~~~~~~~~~~~i~~~l~~~y~~~ 178 (894)
....++|++++||+||++++......+ ..+++|++.+ +++. |...+ ..++.. .+.+.+.+.+.....
T Consensus 94 ~~l~~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~~w~~~~~d~~~v~----s~~~~~~l~~~gi~~ 169 (391)
T PRK13608 94 NKLINLLIKEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHKNWITPYSTRYYVA----TKETKQDFIDVGIDP 169 (391)
T ss_pred HHHHHHHHHhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcccccccCCCCEEEEC----CHHHHHHHHHcCCCH
Confidence 456788999999999998755433222 2358998754 4542 21000 001100 111111111111000
Q ss_pred ceeeecCCCCCCCCCCceeecCccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCC-h--hhhHHhhCC--CCcEE-E
Q 002674 179 EFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPA-G--WKLKEEYLP--SGWKC-L 251 (894)
Q Consensus 179 ~~ll~~p~~~~~p~~~~v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~-~--~~l~~~Ll~--~~~~~-v 251 (894)
....++++|+.... ....+.++++.+++++++++|+++.|+.+. + ..+.+.+.. +++++ +
T Consensus 170 -------------~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~~~~~~~vv 236 (391)
T PRK13608 170 -------------STVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAKSANAQVVM 236 (391)
T ss_pred -------------HHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhcCCCceEEE
Confidence 11123445543221 122345677888998888999999999885 2 234444322 45666 4
Q ss_pred EeCCCCC---C------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH
Q 002674 252 VCGASDS---Q------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF 322 (894)
Q Consensus 252 v~G~~~~---~------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~ 322 (894)
++|.+.. . ..++++++||+++++++|++||++|+++|..|++||+++|+|+|++.... ++|..|+..+.+
T Consensus 237 v~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~p-gqe~~N~~~~~~ 315 (391)
T PRK13608 237 ICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPMIFLNPAP-GQELENALYFEE 315 (391)
T ss_pred EcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCC-CcchhHHHHHHh
Confidence 5676531 1 24589999999999999999999999999899999999999999984222 345589999999
Q ss_pred cCcEEEEccCCCCcccHHHHHHHHHhcCCCcc---------CCCCHHHHHHHHHHHHHc
Q 002674 323 YQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAI 372 (894)
Q Consensus 323 ~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l~ 372 (894)
.|+|+... + .+.+.++|.++++++..+. ..+.+.+++++.|.+.+.
T Consensus 316 ~G~g~~~~--~--~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 316 KGFGKIAD--T--PEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIG 370 (391)
T ss_pred CCcEEEeC--C--HHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhh
Confidence 99998754 2 4577888999987653321 466788888888887753
No 54
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.74 E-value=1.3e-16 Score=181.73 Aligned_cols=325 Identities=14% Similarity=0.084 Sum_probs=184.6
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCccc---ccccCC---CceeEeeeccCCCcccccccccCHH
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVF---TSEIQS---PRLFIRKVLLDCGAVQADALTVDRL 89 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~---~~~i~~---p~~~~~~~~~d~g~~~~~~~~~d~~ 89 (894)
++|+++..+.|.||...+.+|+++|.++||+|+++.+.-.... ...+.. ..+.+.+..+...+ . ........
T Consensus 5 ~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~-~-~~~~~~~~ 82 (380)
T PRK13609 5 PKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFY-Y-GVEKIYDK 82 (380)
T ss_pred CeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHH-h-ccCcccch
Confidence 3566678889999999999999999999999777654321100 000000 00000000000000 0 00000000
Q ss_pred HHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHH---HHHhCCcEEEE-ecCchh--HHHH---HHHhhh
Q 002674 90 ASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRA---AADAGIRSVCV-TNFSWD--FIYA---EYVMAA 160 (894)
Q Consensus 90 ~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~a---A~~lgIP~V~i-sn~~~~--~~~~---~~~~~~ 160 (894)
.... ++ .........+++++++||+||+++...+... +..+++|++.+ +++... ..+. .++.
T Consensus 83 ~~~~----~~---~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~~~~~~ad~i~~-- 153 (380)
T PRK13609 83 KIFS----WY---ANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHKIWVHREVDRYFV-- 153 (380)
T ss_pred HHHH----HH---HHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCcccccCCCCEEEE--
Confidence 0000 00 0111245678899999999999875443322 23456898743 333210 0000 0000
Q ss_pred ccchHHHHHHHHhhccccceeeecCCCCCCCCCCceeecCccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCCh---
Q 002674 161 GHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--- 236 (894)
Q Consensus 161 ~~~~~~i~~~l~~~y~~~~~ll~~p~~~~~p~~~~v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--- 236 (894)
..+.+.+.+.+.... +....++++|+.... ....+...++.+++++++++|+++.|+.+..
T Consensus 154 --~s~~~~~~l~~~gi~-------------~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 154 --ATDHVKKVLVDIGVP-------------PEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred --CCHHHHHHHHHcCCC-------------hhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 011111111111000 011122344442211 1123445788889888888888888887753
Q ss_pred hhhHHhhCC-CCcEEEE-eCCCCC----------CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 002674 237 WKLKEEYLP-SGWKCLV-CGASDS----------QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (894)
Q Consensus 237 ~~l~~~Ll~-~~~~~vv-~G~~~~----------~lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ 304 (894)
..+.+.+.. +++++++ +|.+.. ..++|++++||+++++++|++||++|+++|..|+.||+++|+|+|+
T Consensus 219 ~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~ 298 (380)
T PRK13609 219 KELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVIL 298 (380)
T ss_pred HHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEE
Confidence 234444432 4676654 564421 1346899999998899999999999999998899999999999998
Q ss_pred EeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc---------CCCCHHHHHHHHHHHHH
Q 002674 305 VRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (894)
Q Consensus 305 ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l 371 (894)
... ....+..|+..+.+.|+++... + .+.+.++|.++++++..+. ..+...+++++.+++.+
T Consensus 299 ~~~-~~g~~~~n~~~~~~~G~~~~~~--~--~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~ 369 (380)
T PRK13609 299 YKP-VPGQEKENAMYFERKGAAVVIR--D--DEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAEN 369 (380)
T ss_pred CCC-CCCcchHHHHHHHhCCcEEEEC--C--HHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhh
Confidence 531 1234557999999999987653 2 4688889999987653221 35567788888887764
No 55
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.73 E-value=2.3e-16 Score=171.62 Aligned_cols=249 Identities=17% Similarity=0.193 Sum_probs=141.8
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcc
Q 002674 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (894)
Q Consensus 23 ~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~ 102 (894)
...|+||++||++||++|+++||+|+|++..........+...++.+..+.. . .+.
T Consensus 10 ~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~--------~--~~~-------------- 65 (279)
T TIGR03590 10 SEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPD--------E--SSR-------------- 65 (279)
T ss_pred ccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecC--------C--Cch--------------
Confidence 5678999999999999999999999999976533222222211211211100 0 000
Q ss_pred hHHhHHHHHHHHhcCCCcEEEECCchhHH---HHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccc
Q 002674 103 RKSILKDEVEWLNSIKADLVVSDVVPVAC---RAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCE 179 (894)
Q Consensus 103 ~~~ll~~~~~~L~~~~PDlVV~D~~~~a~---~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~~ 179 (894)
..-.....++|++.+||+||.|++-... ..-+..+.++++++++.-...+..++-..... .+ ...|..
T Consensus 66 -~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~~~~~D~vin~~~~----~~--~~~y~~-- 136 (279)
T TIGR03590 66 -YDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADRPHDCDLLLDQNLG----AD--ASDYQG-- 136 (279)
T ss_pred -hhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCCCcCCCEEEeCCCC----cC--HhHhcc--
Confidence 0011234667888899999999743222 12233467888888865111100000000000 00 001110
Q ss_pred eeeecCCCCCCCCCCceeecCcccccCccChHHHHHHh--CC-CCCCcEEEEEcCCCCCh---hhhHHhhCC--CCcE-E
Q 002674 180 FLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKEL--GI-EDDVKLLILNFGGQPAG---WKLKEEYLP--SGWK-C 250 (894)
Q Consensus 180 ~ll~~p~~~~~p~~~~v~~vp~~~~~~~~~~~e~r~~l--gl-~~~~p~Vlvs~Gs~~~~---~~l~~~Ll~--~~~~-~ 250 (894)
..|.- ...-.|+.- ...+++.++.. .. .++.+.|++++||.+.. ..+++.+.. .++. .
T Consensus 137 ---------~~~~~-~~~l~G~~Y---~~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~i~ 203 (279)
T TIGR03590 137 ---------LVPAN-CRLLLGPSY---ALLREEFYQLATANKRRKPLRRVLVSFGGADPDNLTLKLLSALAESQINISIT 203 (279)
T ss_pred ---------cCcCC-CeEEecchH---HhhhHHHHHhhHhhhcccccCeEEEEeCCcCCcCHHHHHHHHHhccccCceEE
Confidence 00100 111112200 01112221110 00 11346899999988764 244555432 3443 3
Q ss_pred EEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH
Q 002674 251 LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (894)
Q Consensus 251 vv~G~~~~~---------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l 320 (894)
+++|++.+. ..+|+++.+|+++|+++|+.||++|+++| +|++|++++|+|+|++|.. .+|..||+.+
T Consensus 204 vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~--~nQ~~~a~~~ 279 (279)
T TIGR03590 204 LVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLA--ENQQSNSQQL 279 (279)
T ss_pred EEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEec--ccHHHHhhhC
Confidence 567876532 24689999999999999999999999988 9999999999999999954 5788888753
No 56
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.73 E-value=2e-16 Score=180.33 Aligned_cols=157 Identities=20% Similarity=0.188 Sum_probs=117.0
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhHHhh---C------CCCc-EEEEeCCCCC---C-----CCCCeEECC
Q 002674 209 SRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---L------PSGW-KCLVCGASDS---Q-----LPPNFIKLP 268 (894)
Q Consensus 209 ~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~~~L---l------~~~~-~~vv~G~~~~---~-----lp~nv~v~g 268 (894)
.++++++.+|+++++++|++..|+.+.+ ..+.+.+ . .+++ .++++|.+.. . ...+++++|
T Consensus 192 ~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G 271 (382)
T PLN02605 192 PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRG 271 (382)
T ss_pred CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEe
Confidence 4567889999988889888888877764 2333322 2 2344 4677887632 1 234788999
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHh
Q 002674 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (894)
Q Consensus 269 ~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~ 348 (894)
|+++++++|++||++|+.+|.+|++|||++|+|+|+.+.... .+..|++.+.+.|.|+.. . +++.+.++|.+++.
T Consensus 272 ~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pg-qe~gn~~~i~~~g~g~~~--~--~~~~la~~i~~ll~ 346 (382)
T PLN02605 272 FVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIPG-QEEGNVPYVVDNGFGAFS--E--SPKEIARIVAEWFG 346 (382)
T ss_pred ccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCCc-cchhhHHHHHhCCceeec--C--CHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999985432 233799999999999865 2 35688899999987
Q ss_pred c-CCCcc---------CCCCHHHHHHHHHHHH
Q 002674 349 L-KPCYE---------GGINGGEVAAHILQET 370 (894)
Q Consensus 349 ~-~~~~~---------~~~~g~~~~A~~i~~~ 370 (894)
+ +..+. ..+++++++++.+.+.
T Consensus 347 ~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 347 DKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 6 42211 5677777777777765
No 57
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.72 E-value=2.5e-15 Score=168.59 Aligned_cols=300 Identities=15% Similarity=0.091 Sum_probs=168.2
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHH
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~ 96 (894)
+|++...+ -.||+.++..++++|.++||+|++++..... ........++.+..+... +. ........+..+.
T Consensus 2 ~i~~~~g~-~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~-~~~~~~~~g~~~~~i~~~-~~-----~~~~~~~~l~~~~ 73 (348)
T TIGR01133 2 KVVLAAGG-TGGHIFPALAVAEELIKRGVEVLWLGTKRGL-EKRLVPKAGIEFYFIPVG-GL-----RRKGSFRLIKTPL 73 (348)
T ss_pred eEEEEeCc-cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcc-hhcccccCCCceEEEecc-Cc-----CCCChHHHHHHHH
Confidence 56444433 3599999999999999999999999863321 111111112223222111 00 0011111111111
Q ss_pred HHhhcchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHh
Q 002674 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (894)
Q Consensus 97 ~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~ 173 (894)
.+ . ..+....+++++++||+|+++. ...+.++++..++|.+.+.. .+.. .. .. .++
T Consensus 74 ~~----~-~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~-~~~~---~~-------~~---~~~-- 132 (348)
T TIGR01133 74 KL----L-KAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQ-NAVP---GL-------TN---KLL-- 132 (348)
T ss_pred HH----H-HHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECC-CCCc---cH-------HH---HHH--
Confidence 11 1 1234557789999999999875 23455677888999975421 1110 00 00 011
Q ss_pred hccccceeeecCCCCCCCC--CCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhhH-H---hhCC
Q 002674 174 DYSHCEFLIRLPGYCPMPA--FRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYLP 245 (894)
Q Consensus 174 ~y~~~~~ll~~p~~~~~p~--~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~l~-~---~Ll~ 245 (894)
+..++.++..... +.. ...+++.|+........ ..++.++++++.++|++..|+.+.. .+++ + .+..
T Consensus 133 -~~~~d~ii~~~~~--~~~~~~~~~i~n~v~~~~~~~~--~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~ 207 (348)
T TIGR01133 133 -SRFAKKVLISFPG--AKDHFEAVLVGNPVRQEIRSLP--VPRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE 207 (348)
T ss_pred -HHHhCeeEECchh--HhhcCCceEEcCCcCHHHhccc--chhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh
Confidence 1123333222111 011 01244555532211111 1133567766666665555555543 1222 2 2223
Q ss_pred CCcEE-EEeCCCCCC-----CC-CCe-EECCCCC-CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC-CCchHH
Q 002674 246 SGWKC-LVCGASDSQ-----LP-PNF-IKLPKDA-YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY-FNEEPF 315 (894)
Q Consensus 246 ~~~~~-vv~G~~~~~-----lp-~nv-~v~g~~~-~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~-~~eq~~ 315 (894)
.++.+ +++|.+..+ +. .++ .++.|.. +++++|+.||++|+++|.++++|||++|+|+|+++.++ ..+|..
T Consensus 208 ~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~ 287 (348)
T TIGR01133 208 KGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFIDENMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYY 287 (348)
T ss_pred cCcEEEEECCcchHHHHHHHHhhCCceEEecCcccCHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhh
Confidence 34555 345654221 11 111 2222332 68899999999999999889999999999999998653 246778
Q ss_pred HHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 316 LRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 316 na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
|++.+.+.+.|..++..+.+++.+.++|+++++++
T Consensus 288 ~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 288 NAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP 322 (348)
T ss_pred HHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH
Confidence 99999999999999887777789999999999765
No 58
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.70 E-value=1.1e-16 Score=175.06 Aligned_cols=170 Identities=14% Similarity=0.230 Sum_probs=131.0
Q ss_pred EEEEcCccccc----cccccc-cCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002674 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (894)
Q Consensus 498 ~~~~APGRv~L----iGEH~D-y~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (894)
+.++||||||| +|+|.| |++..++.+||+++.++.+++.++.. +.+.+.
T Consensus 3 ~~~~apakinl~l~i~g~~~dg~h~l~si~~ai~l~~~v~v~~~~~~~---------------------~~i~~~----- 56 (286)
T PRK00128 3 ILEKAPAKINLSLDVLGKREDGYHEVEMIMQTIDLADRLEIEKLKEDG---------------------IVVESN----- 56 (286)
T ss_pred EEEeccceEEEEeecCccCCCCcceeheeeEecCCCcEEEEEECCCCC---------------------EEEEeC-----
Confidence 56899999999 899999 99999999999999999998865432 222110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHH
Q 002674 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (894)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl 652 (894)
+ .. .+ ..|.|++..++..+.+..+.. .|++|.|.++||.|+|||||||.
T Consensus 57 --------~-~~-------------------~~-~~~~n~~~~~~~~~~~~~~~~--~~~~i~i~~~iP~~~GLGSSsa~ 105 (286)
T PRK00128 57 --------N-RY-------------------VP-NDERNLAYKAAKLLKERYNIK--QGVSITIDKNIPVAAGLAGGSSD 105 (286)
T ss_pred --------C-CC-------------------CC-CCCCcHHHHHHHHHHHhcCCC--CCeEEEEEcCCCccccchHHHHH
Confidence 0 00 01 135678888777777666653 58999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeC
Q 002674 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 732 (894)
Q Consensus 653 ~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~s 732 (894)
.+|++.|+++++|.++++++++++|.++| .|..++++||. .+...+.... .+++.+++..++++++
T Consensus 106 a~a~~~al~~~~~~~l~~~~l~~~a~~~g----------~dv~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p 171 (286)
T PRK00128 106 AAATLRGLNKLWNLGLSLEELAEIGLEIG----------SDVPFCIYGGT---ALATGRGEKI-TPLKSPPSCWVVLAKP 171 (286)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHhC----------CCCCeEeeCCe---EEEecCCccc-ccCCCCCCcEEEEEcC
Confidence 99999999999999999999999998874 27788999984 3333332222 4555456788999999
Q ss_pred CCCccc
Q 002674 733 GIRHSV 738 (894)
Q Consensus 733 gv~~~~ 738 (894)
+...+|
T Consensus 172 ~~~~~T 177 (286)
T PRK00128 172 DIGVST 177 (286)
T ss_pred CCCCCH
Confidence 887665
No 59
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase. Members of this family of GHMP kinases were previously designated as conserved hypothetical protein YchB or as isopentenyl monophosphate kinase. It is now known, in tomato and E. coli, to encode 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, an enzyme of the deoxyxylulose phosphate pathway of terpenoid biosynthesis.
Probab=99.70 E-value=1.5e-16 Score=173.75 Aligned_cols=172 Identities=15% Similarity=0.157 Sum_probs=130.6
Q ss_pred EEEEcCcccccccccccc-CCCe----eeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002674 498 FVARAPGRLDVMGGIADY-SGSL----VLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy-~gg~----vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (894)
++++|||||||+|+|+|| ++|+ +++++|+++.++.+.+++++.+ .+.+.
T Consensus 2 ~~~~apaKiNL~l~i~~~r~dGyH~l~sl~~~i~l~d~v~i~~~~~~~i---------------------~~~~~----- 55 (293)
T TIGR00154 2 HVFPSPAKLNLFLYITGKRPDGYHELQTLMQFLDLGDKIIISVRSDDDI---------------------RLLKG----- 55 (293)
T ss_pred ceEeecccEEEEEecCCcCCCCCcceEEEEEEeccCcEEEEEECCCCcE---------------------EEeeC-----
Confidence 357899999999999998 7787 9999999999999988765432 22211
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCC--CCCCEEEEEEeCCCCCCCCChHH
Q 002674 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVR--FEDSISMLVSSAVPEGKGVSSSA 650 (894)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~--~~~G~~i~i~s~iP~g~GLgSSA 650 (894)
.+ ++ +.. .||+..++..+.+..+.+ ...|+++.|.++||.|+||||||
T Consensus 56 ----~~--~~----------------------~~~--~nlv~~a~~~l~~~~~~~~~~~~~~~i~i~~~iP~~aGLGsss 105 (293)
T TIGR00154 56 ----DF--DV----------------------PLE--ENLIYRAAQLLKNFANSKIKSLDGANIEIDKNIPMGAGLGGGS 105 (293)
T ss_pred ----CC--CC----------------------CCC--CcHHHHHHHHHHHHhcccccCCCCeEEEEeccCCCCCCcchhH
Confidence 00 11 001 289999888877666521 12599999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEE
Q 002674 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI 730 (894)
Q Consensus 651 Al~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~ 730 (894)
|.++|++.|++.+++.++++++++++|.++| .|...+++||. .+. ....+..++++.+++..++++
T Consensus 106 a~aaa~l~al~~~~~~~l~~~~l~~la~~lg----------~Dv~~~~~gg~---~~~-~g~ge~~~~l~~~~~~~~vl~ 171 (293)
T TIGR00154 106 SDAATVLVGLNQLWQLGLSLEELAELGLTLG----------ADVPFFVSGHA---AFA-TGVGEIITPFEDPPEKWVVIA 171 (293)
T ss_pred HHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcceEEECCe---EEE-EecCcEEEECCCCCCcEEEEE
Confidence 9999999999999999999999999998763 37788889983 333 222332245554567889999
Q ss_pred eCCCCcccC
Q 002674 731 DSGIRHSVG 739 (894)
Q Consensus 731 ~sgv~~~~~ 739 (894)
++++.-+|.
T Consensus 172 ~p~~~~sT~ 180 (293)
T TIGR00154 172 KPHVSISTP 180 (293)
T ss_pred cCCCCcChH
Confidence 999887763
No 60
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.69 E-value=3e-15 Score=176.62 Aligned_cols=184 Identities=18% Similarity=0.212 Sum_probs=125.9
Q ss_pred CCCCceeecCcccccCcc----ChHHHHHHhCCCCCCcEEEEEcCCCCC----hhh----hHHhhCC-CCcEEEEe--CC
Q 002674 191 PAFRDVIDVPLVVRRLHK----SRKEVRKELGIEDDVKLLILNFGGQPA----GWK----LKEEYLP-SGWKCLVC--GA 255 (894)
Q Consensus 191 p~~~~v~~vp~~~~~~~~----~~~e~r~~lgl~~~~p~Vlvs~Gs~~~----~~~----l~~~Ll~-~~~~~vv~--G~ 255 (894)
|..+++..+|++...... ...+|.+.+... ...+||+||||... +.+ +..++.. ++..+++. +.
T Consensus 242 ~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~-~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~ 320 (496)
T KOG1192|consen 242 PLLPKVIPIGPLHVKDSKQKSPLPLEWLDILDES-RHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPD 320 (496)
T ss_pred CCCCCceEECcEEecCccccccccHHHHHHHhhc-cCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 335678888875432111 345666554421 34799999999872 322 2333433 35544432 22
Q ss_pred CC----CCC----CCCeEECCCCCCHH--HHH-hh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH
Q 002674 256 SD----SQL----PPNFIKLPKDAYTP--DFM-AA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF 322 (894)
Q Consensus 256 ~~----~~l----p~nv~v~g~~~~vp--~ll-~~--~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~ 322 (894)
.. ..+ +.||...+ |+| ++| +| .++||||||+|+++|++++|||+|++| .|+||+.||+++++
T Consensus 321 ~~~~~~~~~~~~~~~nV~~~~---W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~P--lf~DQ~~Na~~i~~ 395 (496)
T KOG1192|consen 321 DSIYFPEGLPNRGRGNVVLSK---WAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVP--LFGDQPLNARLLVR 395 (496)
T ss_pred cchhhhhcCCCCCcCceEEec---CCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCC--ccccchhHHHHHHh
Confidence 11 123 34677654 777 554 33 789999999999999999999999999 89999999999999
Q ss_pred cCcEEEEccCCCCcccHHHHHHHHHhcCCC----------ccCCCCHHHHHHHHHHHHHccCcccCCCCchhhhhH
Q 002674 323 YQGGVEMIRRDLLTGHWKPYLERAISLKPC----------YEGGINGGEVAAHILQETAIGKNYASDKLSGARRLR 388 (894)
Q Consensus 323 ~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~----------~~~~~~g~~~~A~~i~~~l~~~~~~~~~~~ga~~L~ 388 (894)
.|.+.++...++....+..++.++++++.. +.+++..+ +.+.+|.++ +.++.++.+|+
T Consensus 396 ~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~-------~~~~~~~~~l~ 463 (496)
T KOG1192|consen 396 HGGGGVLDKRDLVSEELLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKWVEF-------VARHGGAKHLK 463 (496)
T ss_pred CCCEEEEehhhcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHHHHH-------HHhcCCCcccC
Confidence 999999998888766688888888866521 11566666 677777776 56677778886
No 61
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.68 E-value=8.6e-16 Score=169.84 Aligned_cols=171 Identities=12% Similarity=0.198 Sum_probs=131.0
Q ss_pred EEEEcCccccc----cccccc-cCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 002674 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (894)
Q Consensus 498 ~~~~APGRv~L----iGEH~D-y~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (894)
+.++||||||| +|+|.| |++..++.++|+++.++.++++++.. +.+.+.
T Consensus 4 ~~~~apakiNL~L~i~g~~~dGy~~l~~~~~~i~l~d~v~v~~~~~~~---------------------~~~~~~----- 57 (312)
T PRK02534 4 YTLIAPAKINLHLEILGDRPDGFHELAMVMQSIDLADRLELRNNGDGT---------------------IRLHCD----- 57 (312)
T ss_pred EEEEeceEEEeccccCccCCCCCCceEEEEEECCCCCEEEEEECCCCc---------------------EEEEEC-----
Confidence 56789999999 899999 99999999999999999998865432 222110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHH
Q 002674 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (894)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl 652 (894)
. ..++ ....|++..++..++++.+.+. .|++|.|.++||.|+|||||||.
T Consensus 58 ~----~~~~-------------------------~~~~n~~~~~~~~~~~~~~~~~-~~~~i~i~~~IP~~~GLGSssa~ 107 (312)
T PRK02534 58 H----PQLS-------------------------TDDDNLIYRAAQLLRKRFPFAE-GGVDITLEKRIPIGAGLAGGSTD 107 (312)
T ss_pred C----CCCC-------------------------CCchhHHHHHHHHHHHHhCCCC-CCeEEEEecCCCCcCCccHHHHH
Confidence 0 0000 0125788888887777767653 58999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEE-e
Q 002674 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI-D 731 (894)
Q Consensus 653 ~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~-~ 731 (894)
.+|++.|++.+++.++++++++++|.++|. |-.++++||. .+.....+..++++.|+++.++++ +
T Consensus 108 ~~A~~~al~~~~~~~l~~~~l~~~a~~~g~----------dv~~~~~GG~----~~~~~~g~~~~~~~~~~~~~~vv~~~ 173 (312)
T PRK02534 108 AAAVLVGLNLLWGLGLTQPELESLAAELGS----------DVPFCIAGGT----QLCFGRGEILEPLPDLDGLGVVLAKY 173 (312)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------CCcEEeECCe----EEEECCCCEeEECCCCCCcEEEEEEC
Confidence 999999999999999999999999987652 5577889983 233333332356766778998887 7
Q ss_pred CCCCccc
Q 002674 732 SGIRHSV 738 (894)
Q Consensus 732 sgv~~~~ 738 (894)
++..-+|
T Consensus 174 p~~~~~T 180 (312)
T PRK02534 174 PSLSVST 180 (312)
T ss_pred CCCCccH
Confidence 8887554
No 62
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.67 E-value=1.7e-15 Score=172.50 Aligned_cols=296 Identities=16% Similarity=0.095 Sum_probs=171.3
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhc
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~ 101 (894)
+.|.-.||+.++ +|+++|+++|++|+|++...+.+....++. .+.+..+ .. +-....+..+..+
T Consensus 11 ~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~-~~~~~~l--~v---------~G~~~~l~~~~~~--- 74 (385)
T TIGR00215 11 VAGEASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEV-LYSMEEL--SV---------MGLREVLGRLGRL--- 74 (385)
T ss_pred EeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCcc-ccChHHh--hh---------ccHHHHHHHHHHH---
Confidence 344447999999 999999999999999875432211111110 0011110 00 0001122222222
Q ss_pred chHHhHHHHHHHHhcCCCcEEEE-CC-chh--HHHHHHHhCCcEEEEe---cCchhHHHHHHHhhhccchHHHHHHHHhh
Q 002674 102 PRKSILKDEVEWLNSIKADLVVS-DV-VPV--ACRAAADAGIRSVCVT---NFSWDFIYAEYVMAAGHHHRSIVWQIAED 174 (894)
Q Consensus 102 ~~~~ll~~~~~~L~~~~PDlVV~-D~-~~~--a~~aA~~lgIP~V~is---n~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 174 (894)
...+.+..+++++++||+||+ |+ .+. ...+|+.+|||++.+. -+.|... +.. .+...++.+...
T Consensus 75 --~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~waw~~~-~~r------~l~~~~d~v~~~ 145 (385)
T TIGR00215 75 --LKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVWAWRKW-RAK------KIEKATDFLLAI 145 (385)
T ss_pred --HHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHhhcCcc-hHH------HHHHHHhHhhcc
Confidence 224457788999999999996 44 222 3347888999998762 2223210 000 011111111111
Q ss_pred ccccceeeecCCCCCCCCCCceeecCcccccCc--cChHHHHHHhCCCCCCcEEEEEcCCCCCh-hh----hHH---hhC
Q 002674 175 YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLH--KSRKEVRKELGIEDDVKLLILNFGGQPAG-WK----LKE---EYL 244 (894)
Q Consensus 175 y~~~~~ll~~p~~~~~p~~~~v~~vp~~~~~~~--~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-~~----l~~---~Ll 244 (894)
+......+. .......+++.|+...... ..+.+.++.+++++++++|++..||.+.. .. +++ .+.
T Consensus 146 ~~~e~~~~~-----~~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~ 220 (385)
T TIGR00215 146 LPFEKAFYQ-----KKNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE 220 (385)
T ss_pred CCCcHHHHH-----hcCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHH
Confidence 110000000 0000012344454322221 34567788899988889888888888764 12 222 221
Q ss_pred --CCCcEEEEeC-CCC--C---C----C--CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEE----e
Q 002674 245 --PSGWKCLVCG-ASD--S---Q----L--PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFV----R 306 (894)
Q Consensus 245 --~~~~~~vv~G-~~~--~---~----l--p~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~i----p 306 (894)
.+++++++.+ ... . + + ...+..+ ..+++++|++||++|+.+|..|+ |++++|+|+|++ |
T Consensus 221 ~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~p 297 (385)
T TIGR00215 221 QQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLI--DGDARKAMFAADAALLASGTAAL-EAALIKTPMVVGYRMKP 297 (385)
T ss_pred HhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEE--CchHHHHHHhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCH
Confidence 2456655432 221 1 0 1 2234333 34678999999999999997776 999999999999 6
Q ss_pred CCCCC-------chHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 307 RDYFN-------EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 307 ~~~~~-------eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
.+.+. .|..|++.+.+.++...+-.++.+++.+.+.+.++++++
T Consensus 298 l~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 298 LTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 43221 256688999999999888888999999999999999776
No 63
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=99.66 E-value=2.9e-17 Score=129.31 Aligned_cols=51 Identities=33% Similarity=0.489 Sum_probs=41.6
Q ss_pred HHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEec
Q 002674 485 KAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKI 536 (894)
Q Consensus 485 ~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~ 536 (894)
..|.+.|+.++ ..+++|||||||||||+||+||.||||||+++|++++++|
T Consensus 2 ~~F~~~fg~~p-~~~~~APGRvnliGeHtDy~gG~Vl~~Ai~~~~~~a~~~r 52 (52)
T PF10509_consen 2 EEFEEFFGEEP-EVVASAPGRVNLIGEHTDYNGGFVLPAAIDLRTYVAVSPR 52 (52)
T ss_dssp HHHHHHHSS---SEEEEEEEEEEEE-TT-GGGT-EEEEEEEEEEEEEEEEEE
T ss_pred hhHHHHhCCCC-CEEEECCceEEecCcccccCCCeEEEEEeeccEEEEEEcC
Confidence 35677888655 4699999999999999999999999999999999999986
No 64
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents plant and fungal forms of the ERG8 type of phosphomevalonate kinase.
Probab=99.59 E-value=4.1e-14 Score=160.60 Aligned_cols=208 Identities=17% Similarity=0.181 Sum_probs=140.2
Q ss_pred EEcCccccccccccccC-CCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 002674 500 ARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (894)
Q Consensus 500 ~~APGRv~LiGEH~Dy~-gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (894)
++|||||-|.||..+.. |++.+-+|++.++|+.+.+..... ..+ ...+.|.|. .|.+. .+
T Consensus 2 ~sAPGKlliAGgYlVLep~y~aiVval~~r~~a~v~~~~~~~-~~~--------------~~~i~v~Sp--Qf~~~--~~ 62 (454)
T TIGR01219 2 ASAPGKVLMAGGYLVLDKPYAGLVLGLNARFYAIVKPINEEV-GAW--------------KWDVRVKSP--QFSDR--EW 62 (454)
T ss_pred cccCceEEEecceEEecCCCcEEEEEecceEEEEEeeccccc-ccC--------------cceEEEeCC--CCCCC--ce
Confidence 68999999999999987 788888999999999997754321 100 123455544 23322 12
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHh---CCC---CCCCEEEEEEeCC------------
Q 002674 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVR---FEDSISMLVSSAV------------ 640 (894)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~---g~~---~~~G~~i~i~s~i------------ 640 (894)
.+.... +...+..... ........ ..|+..++...++.. +.. + .+++|.|.|+.
T Consensus 63 ~y~~~~---~~~~~~~~~~---~~~~~~~~-n~fv~~ai~~~~~y~~~~~~~~~~l-~~~~itI~sd~d~ySq~~~~~~~ 134 (454)
T TIGR01219 63 LYKISL---NHLTLQSVSA---SDSRNPFV-NPFIQYAIAAVHLYFDKESLHKLLL-QGLDITILGDNAYYSQPESLGTL 134 (454)
T ss_pred EEEEec---CCccceeecc---cccCCCCC-ChHHHHHHHHHHHHHHhcccccccc-CceEEEEEecCCcccccchhccc
Confidence 222211 0000000000 00001112 346766665443322 222 3 58999998877
Q ss_pred -------CC--------CCCCChHHHHHHHHHHHHHHHhCCCC-------------CHHHHHHHHHHHHHhhcCC-CCCh
Q 002674 641 -------PE--------GKGVSSSASVEVASMSAIAAAHGLNI-------------HPRDLALLCQKVENHIVGA-PCGV 691 (894)
Q Consensus 641 -------P~--------g~GLgSSAAl~va~~~al~~l~~~~l-------------~~~~la~~a~~~E~~~~G~-~~G~ 691 (894)
+. +.|||||||++||++.||+.+++..+ +++.+.++|+.+|...+|+ +||
T Consensus 135 ~~~~~f~~~~~~~~e~~K~GLGSSAAvtVa~v~ALl~~~~~~~~~~~~~~~~~~~~~~~~i~kLA~~ah~~~qGk~GSG- 213 (454)
T TIGR01219 135 APFASITFNAAEKPEVAKTGLGSSAAMTTALVAALLHYLGVVDLSDPDKEGKFGCSDLDVIHNLAQTAHCLAQGKVGSG- 213 (454)
T ss_pred ccccccccccccCCCccccCccHHHHHHHHHHHHHHHHhCCcccccccccccccccCHHHHHHHHHHHHHhhcCCCCCc-
Confidence 22 68999999999999999999999877 7899999999999999996 688
Q ss_pred hhhHHhhcCCCCeEEEEEecCC----------------------------ceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 692 MDQMASACGEANKLLAMVCQPA----------------------------ELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 692 mDq~as~~G~~~~~~~~~~~~~----------------------------~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
.|.++++||| +++..|.+. ++ +.+++|++++|++.|||.+++|.
T Consensus 214 ~DvAaavyGg---i~Y~rfd~~~l~~~~~~~~~~~~~~~L~~~v~~~W~~~i-~~l~lP~~l~Llvgdtg~~ssT~ 285 (454)
T TIGR01219 214 FDVSAAVYGS---QRYRRFSPELISFLQVAITGLPLNEVLGTIVKGKWDNKR-TEFSLPPLMNLFMGDPGGGSSTP 285 (454)
T ss_pred hhhhhhhcCc---eEEEecChhhhhhhhccccccchhhhHHHHhccCCCCce-eeccCCCCCEEEEEcCCCCcCcH
Confidence 5999999999 355555432 22 35677889999999999998774
No 65
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2.7.1.6 from EC), homoserine (2.7.1.39 from EC), mevalonate (2.7.1.36 from EC) and phosphomevalonate (2.7.4.2 from EC) kinases contain, in their N-terminal section, a conserved Gly/Ser-rich region which is probably involved in the binding of ATP [, ]. This group of kinases has been called 'GHMP' (from the first letter of their substrates).; GO: 0005524 ATP binding, 0016301 kinase activity, 0016310 phosphorylation; PDB: 3F0N_B 1PIE_A 2AJ4_A 1K47_E 3GON_A 2R3V_C 3HUL_A 1KVK_A 2R42_A 3D4J_A ....
Probab=99.51 E-value=4.6e-14 Score=119.12 Aligned_cols=67 Identities=39% Similarity=0.607 Sum_probs=63.7
Q ss_pred EEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCC
Q 002674 633 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGE 701 (894)
Q Consensus 633 ~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~ 701 (894)
+|.|+|+||.++|||||||+.+|++.+++.+++.++++++++++++++|+.+ |+++| +|+++++|||
T Consensus 1 ~i~i~s~iP~~~GLgSSaa~~~a~~~a~~~~~~~~~~~~~l~~~a~~~e~~~-g~~~g-~d~~~~~~GG 67 (67)
T PF00288_consen 1 DIEIDSNIPPGSGLGSSAALAVALAAALNKLFGLPLSKEELAKLAQEAERYI-GKPSG-IDDAASAYGG 67 (67)
T ss_dssp EEEEEESSTTTSSSSHHHHHHHHHHHHHHHHTTTSSBHHHHHHHHHHHHHHC-SSSHS-HHHHHHHHCS
T ss_pred CeEEEccCCCCCcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHc-CCCCh-hhHHHHHhCc
Confidence 5899999999999999999999999999999999999999999999999877 99988 5779999997
No 66
>PRK01123 shikimate kinase; Provisional
Probab=99.49 E-value=7.6e-13 Score=144.16 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCC-CC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA-PC 689 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~-~~ 689 (894)
|++..++..+++..+.. .|+++.+.++||.++|||||||+.||++.|++.+++.++++++++++|.++|+..++. .+
T Consensus 57 ~~v~~~~~~~~~~~~~~--~~~~i~i~s~IP~~~GLGSSaA~~va~~~a~~~~~~~~l~~~el~~la~~~e~~~~~~~~g 134 (282)
T PRK01123 57 RLIERCVELVLERFGID--YGATVRTKSEIPLASGLKSSSAAANATVLATLDALGEDLDDLDILRLGVKASRDAGVTVTG 134 (282)
T ss_pred hHHHHHHHHHHHHhCCC--CCEEEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccccccC
Confidence 67777777777777764 5999999999999999999999999999999999999999999999999999987764 46
Q ss_pred ChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 690 G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
+.+|++++++||. .+.+......... ++.++.++++.++.+.+|.
T Consensus 135 ~~~d~~~~~~GG~---~~~~~~~~~~~~~--~~~~~~~vv~~p~~~~~T~ 179 (282)
T PRK01123 135 AFDDACASYFGGV---TVTDNREMKLLKR--DEVELDVLVLIPPEGAFSA 179 (282)
T ss_pred chhHHHHHHhCCE---EEEcCCCceEEEE--ecCCcEEEEEECCCCcchh
Confidence 6678999999994 3334322222123 3345899999999877664
No 67
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.49 E-value=1.2e-12 Score=149.07 Aligned_cols=318 Identities=17% Similarity=0.122 Sum_probs=166.5
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHH
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~ 95 (894)
|+|++. .|.-.||+.++. ++++|+++++++.+++..........++. . +.... ..+. .....+
T Consensus 2 ~ki~i~-~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~----------l~~~--g~~~~~ 64 (380)
T PRK00025 2 LRIAIV-AGEVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCES-L--FDMEE----------LAVM--GLVEVL 64 (380)
T ss_pred ceEEEE-ecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCcc-c--cCHHH----------hhhc--cHHHHH
Confidence 355433 444479999999 99999999999888764332222221110 0 11000 0000 001111
Q ss_pred HHHhhcchHHhHHHHHHHHhcCCCcEEEEC-C-chhH--HHHHHHhCCcEEEE-ecCchhHHHHHHHhhhccchHHHHHH
Q 002674 96 SETAVAPRKSILKDEVEWLNSIKADLVVSD-V-VPVA--CRAAADAGIRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQ 170 (894)
Q Consensus 96 ~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D-~-~~~a--~~aA~~lgIP~V~i-sn~~~~~~~~~~~~~~~~~~~~i~~~ 170 (894)
...+ .....+....+++++++||+|++. + .++. ..+|+..|||++.+ ++..|... ... ..+
T Consensus 65 ~~~~--~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~~-~~~-----------~~~ 130 (380)
T PRK00025 65 PRLP--RLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAWR-QGR-----------AFK 130 (380)
T ss_pred HHHH--HHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhcC-chH-----------HHH
Confidence 1111 111234566788999999999964 2 2233 33466789999876 33222210 000 000
Q ss_pred HHhhccccceeeecCCCC--CCCC--C-CceeecCccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCChh-----hh
Q 002674 171 IAEDYSHCEFLIRLPGYC--PMPA--F-RDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KL 239 (894)
Q Consensus 171 l~~~y~~~~~ll~~p~~~--~~p~--~-~~v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~-----~l 239 (894)
+. ..++.++...... .... . ..++++|..... ....+..+++.+++++++++|++..||.+... .+
T Consensus 131 ~~---~~~d~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l 207 (380)
T PRK00025 131 IA---KATDHVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPF 207 (380)
T ss_pred HH---HHHhhheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 00 0011111100000 0000 0 112333332211 11235567788998777787777777765531 12
Q ss_pred HHh---hC--CCCcEEEEeCC-CCC--C-------C-CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 002674 240 KEE---YL--PSGWKCLVCGA-SDS--Q-------L-PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (894)
Q Consensus 240 ~~~---Ll--~~~~~~vv~G~-~~~--~-------l-p~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l 303 (894)
.+. +. .+++++++.|. ... . . .-++.+.. +.++++|+.||++|+.+|.+++ |++++|+|+|
T Consensus 208 ~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~aDl~v~~sG~~~l-Ea~a~G~PvI 284 (380)
T PRK00025 208 LKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD--GQKREAMAAADAALAASGTVTL-ELALLKVPMV 284 (380)
T ss_pred HHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc--ccHHHHHHhCCEEEECccHHHH-HHHHhCCCEE
Confidence 221 22 24566666643 221 1 2 22444433 5689999999999999987666 9999999999
Q ss_pred EEeCCCCCchHHHH------------HHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc-----------C-CCCH
Q 002674 304 FVRRDYFNEEPFLR------------NMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-----------G-GING 359 (894)
Q Consensus 304 ~ip~~~~~eq~~na------------~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~-----------~-~~~g 359 (894)
++|... +-+...+ +.+.+.+++..+..++.+++.+.+++.++++++..+. . .+++
T Consensus 285 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a 363 (380)
T PRK00025 285 VGYKVS-PLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQLRCGA 363 (380)
T ss_pred EEEccC-HHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCH
Confidence 996421 1111222 2233333333344456667889999999998774221 1 4567
Q ss_pred HHHHHHHHHHHH
Q 002674 360 GEVAAHILQETA 371 (894)
Q Consensus 360 ~~~~A~~i~~~l 371 (894)
+.++++.|.+++
T Consensus 364 ~~~~~~~i~~~~ 375 (380)
T PRK00025 364 DERAAQAVLELL 375 (380)
T ss_pred HHHHHHHHHHHh
Confidence 777777777664
No 68
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.46 E-value=1.9e-12 Score=134.04 Aligned_cols=263 Identities=17% Similarity=0.146 Sum_probs=156.5
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcc
Q 002674 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (894)
Q Consensus 23 ~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~ 102 (894)
...|+||++|++.||++|.++|..+.|++.... +..+ +++ ++ ++ ...
T Consensus 11 ~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~---e~~~-------~~~-~~-~f------~~~--------------- 57 (318)
T COG3980 11 LEIGMGHVMRTLTLARELEKRGFACLFLTKQDI---EAII-------HKV-YE-GF------KVL--------------- 57 (318)
T ss_pred cccCcchhhhHHHHHHHHHhcCceEEEecccch---hhhh-------hhh-hh-hc------cce---------------
Confidence 346899999999999999999999999986541 1111 110 10 00 000
Q ss_pred hHHhHHHHHHHHhcCCCcEEEECCchhHH----HHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhcccc
Q 002674 103 RKSILKDEVEWLNSIKADLVVSDVVPVAC----RAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHC 178 (894)
Q Consensus 103 ~~~ll~~~~~~L~~~~PDlVV~D~~~~a~----~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~ 178 (894)
.......|++.++|++|.|++-... .+...++.+.+.+++..-..... .+.++...... .
T Consensus 58 ----~~~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~d---------~d~ivN~~~~a---~ 121 (318)
T COG3980 58 ----EGRGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFKD---------NDLIVNAILNA---N 121 (318)
T ss_pred ----eeecccccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchhh---------hHhhhhhhhcc---h
Confidence 0111225789999999999865543 34446789999987654211111 11122221110 0
Q ss_pred ceeeecCCCCCCCCCCceeecCc--c-ccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHhhCCCCcEE-
Q 002674 179 EFLIRLPGYCPMPAFRDVIDVPL--V-VRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEYLPSGWKC- 250 (894)
Q Consensus 179 ~~ll~~p~~~~~p~~~~v~~vp~--~-~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~Ll~~~~~~- 250 (894)
+..... |...++ ..|+ . .++ ....+++..+ .+..-|+|++||.... .+++..|.+.++.+
T Consensus 122 ~~y~~v------~~k~~~-~lGp~y~~lr~eF~~~r~~~~~-----r~~r~ilI~lGGsDpk~lt~kvl~~L~~~~~nl~ 189 (318)
T COG3980 122 DYYGLV------PNKTRY-YLGPGYAPLRPEFYALREENTE-----RPKRDILITLGGSDPKNLTLKVLAELEQKNVNLH 189 (318)
T ss_pred hhcccc------CcceEE-EecCCceeccHHHHHhHHHHhh-----cchheEEEEccCCChhhhHHHHHHHhhccCeeEE
Confidence 000001 111111 1111 0 111 1112222222 1344699999988775 24555565544433
Q ss_pred EEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH
Q 002674 251 LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE 321 (894)
Q Consensus 251 vv~G~~~~~---------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~ 321 (894)
+++|...+. ..+|+..+-..++|+.+|..||+.|+.+| .|++|++..|+|.++++.. ..|-.-|+.++
T Consensus 190 iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~AaG-stlyEa~~lgvP~l~l~~a--~NQ~~~a~~f~ 266 (318)
T COG3980 190 IVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISAAG-STLYEALLLGVPSLVLPLA--ENQIATAKEFE 266 (318)
T ss_pred EEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheeccc-hHHHHHHHhcCCceEEeee--ccHHHHHHHHH
Confidence 445754432 24677777677889999999999999777 9999999999999999954 46667899999
Q ss_pred HcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 322 FYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 322 ~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
..|+...+... +.+......+.++..+.
T Consensus 267 ~lg~~~~l~~~-l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 267 ALGIIKQLGYH-LKDLAKDYEILQIQKDY 294 (318)
T ss_pred hcCchhhccCC-CchHHHHHHHHHhhhCH
Confidence 99998777654 44445555566665554
No 69
>TIGR01920 Shik_kin_archae shikimate kinase. This model represents the shikimate kinase (SK) gene found in archaea which is only distantly related to homoserine kinase (thrB) and not atr all to the bacterial SK enzyme. The SK from M. janaschii has been overexpressed in E. coli and characterized. SK catalyzes the fifth step of the biosynthesis of chorismate from D-erythrose-4-phosphate and phosphoenolpyruvate.
Probab=99.43 E-value=4.4e-12 Score=136.34 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcC-CCC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVG-APC 689 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G-~~~ 689 (894)
|++..++..+.+..+.+ .|+++.+.++||.++|||||||+.+|++.|++.+++.++++++++++|+++|+..++ ..+
T Consensus 46 n~i~~~~~~~~~~~~~~--~g~~i~i~s~iP~~~GLGSSaA~~~a~~~al~~~~~~~l~~~~l~~la~~~e~~~~~~~~~ 123 (261)
T TIGR01920 46 RLIERILTAIRSKFGIV--DGLEVEVESEIPAGSGLKSSSALVNALVEAVLKAKGVEIDDIDILRLGARLSKDAGLSVTG 123 (261)
T ss_pred HHHHHHHHHHHHhcCCC--CCEEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCC
Confidence 77777777777666653 699999999999999999999999999999999999999999999999999998764 457
Q ss_pred ChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCc
Q 002674 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRH 736 (894)
Q Consensus 690 G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~ 736 (894)
|.+|++++++||. .+.+.++....+..++ ++..++++.++...
T Consensus 124 ~~~D~~~~~~gG~---~~~~~~~~~~~~~~~~-~~~~~vv~~p~~~~ 166 (261)
T TIGR01920 124 AFDDAAASYLGGI---VITDNRRMKILKRDKL-EGCTAAVLVPKEGE 166 (261)
T ss_pred cHHHHHHHHhCCE---EEEeCCCceEEEecCC-CCceEEEEECCCCc
Confidence 7789999999994 4555544333223333 34567777776643
No 70
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.41 E-value=1.7e-13 Score=137.55 Aligned_cols=127 Identities=19% Similarity=0.186 Sum_probs=93.9
Q ss_pred EEEEEcCCCCCh-h-h----hHHhhCCC--Cc-EEEEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecC
Q 002674 225 LLILNFGGQPAG-W-K----LKEEYLPS--GW-KCLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKI 287 (894)
Q Consensus 225 ~Vlvs~Gs~~~~-~-~----l~~~Ll~~--~~-~~vv~G~~~~~--------lp~nv~v~g~~~~vp~ll~~~d~~I~~~ 287 (894)
+|||++||.+.+ . . ..+.+... .+ .++++|..... .+.|+.+++|+++|+++|+.||++|||+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~a 80 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISHA 80 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeCC
Confidence 589999999875 1 1 11111111 23 34557876321 2368999999999999999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCC--CchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCC
Q 002674 288 GYGTVSEALAYKLPFVFVRRDYF--NEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (894)
Q Consensus 288 G~~t~~Eal~~G~P~l~ip~~~~--~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~ 351 (894)
|.+|++|++++|+|+|++|.+.. .+|..|++.+++.|+++.+...+.+...|.++|.+++.++.
T Consensus 81 G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 81 GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPE 146 (167)
T ss_dssp -CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH
T ss_pred CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcH
Confidence 99999999999999999997653 38999999999999999998888878899999999987653
No 71
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.39 E-value=6.1e-12 Score=136.58 Aligned_cols=115 Identities=16% Similarity=0.154 Sum_probs=90.2
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCC
Q 002674 609 WAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAP 688 (894)
Q Consensus 609 W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~ 688 (894)
+.|++..++..+.+..|.. .|++|.+.++||+|+|||||||..+|++.|++.++|.++++++++++|.++|.
T Consensus 60 ~~n~v~~a~~~~~~~~g~~--~~~~i~i~k~IP~~~GLGSSsA~aaA~l~al~~~~~~~l~~~~l~~la~~i~~------ 131 (275)
T PRK14611 60 EENIVYKALRLFERYTGID--INYSIFIEKNIPVGAGLGGGSSNAAVVLKYLNELLGNPLSEEELFELASSISA------ 131 (275)
T ss_pred cccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCC------
Confidence 5788888887766666654 58999999999999999999999999999999999999999999999998663
Q ss_pred CChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 689 CGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 689 ~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
|...+++||. .+........ ..++.+.+..++++++++..+|.
T Consensus 132 ----D~~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p~~~~sT~ 174 (275)
T PRK14611 132 ----DAPFFLKGGF---ALGRGIGDKL-EFLEKPISREITLVYPNIKSSTG 174 (275)
T ss_pred ----CCCeeecCCe---EEEeccCcee-EECCcCCCcEEEEEeCCCCCChH
Confidence 5445678873 3333332222 44444445679999999998864
No 72
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.36 E-value=1.1e-11 Score=133.80 Aligned_cols=166 Identities=14% Similarity=0.189 Sum_probs=117.0
Q ss_pred EEEEcCccccccccccccCCCe--------eeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEeccc
Q 002674 498 FVARAPGRLDVMGGIADYSGSL--------VLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGS 569 (894)
Q Consensus 498 ~~~~APGRv~LiGEH~Dy~gg~--------vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~ 569 (894)
..++||+||||++ | +.|.. .+.++|+.+-.+.+++.+++. +++.+
T Consensus 7 ~~~~apaKiNL~L-~--v~~~r~dGyH~l~s~~~~i~l~D~v~i~~~~~~~---------------------~~i~~--- 59 (271)
T PRK00343 7 LDWPAPAKLNLFL-H--ITGRRADGYHELQTLFQFLDWGDTLHFEVRDDGE---------------------IRLLT--- 59 (271)
T ss_pred EEEeeeeeEEEEe-e--cCCcCCCCCCeeeEEEEEcccceEEEEEECCCCc---------------------EEEeC---
Confidence 4568999999999 5 33333 377789988888888765432 11210
Q ss_pred ccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChH
Q 002674 570 ELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSS 649 (894)
Q Consensus 570 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSS 649 (894)
+..+ ...|.||+..++..+.+..+.. .|+++.|.++||+|+|||||
T Consensus 60 -----------~~~~---------------------~~~~~N~v~~a~~~l~~~~~~~--~~~~i~i~k~IP~gaGLGss 105 (271)
T PRK00343 60 -----------PIPG---------------------VPEEDNLIVRAARLLQKATGTP--LGADISLDKRLPMGGGLGGG 105 (271)
T ss_pred -----------CCCC---------------------CCCcccHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCcCCCCcc
Confidence 0000 0246899999998887766754 59999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEE
Q 002674 650 ASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWG 729 (894)
Q Consensus 650 AAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv 729 (894)
||..+|++.|++++++.++++++++++|++.|- |- +++++|. ..+..-. .+..++++.| ...+++
T Consensus 106 Ss~aaa~l~al~~l~~~~ls~~el~~la~~iga----------Dv-p~~l~g~--~~~~~g~-g~~~~~l~~~-~~~~vl 170 (271)
T PRK00343 106 SSDAATTLVALNRLWQLGLSRDELAELGLKLGA----------DV-PVFVRGH--AAFAEGI-GEILTPVDLP-EKWYLV 170 (271)
T ss_pred hHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------Cc-eEEecCC--cEEEEec-CCEEEECCCC-CcEEEE
Confidence 999999999999999999999999999987642 53 3444442 2233222 2222455543 455789
Q ss_pred EeCCCCcccC
Q 002674 730 IDSGIRHSVG 739 (894)
Q Consensus 730 ~~sgv~~~~~ 739 (894)
++++++.+|.
T Consensus 171 ~~p~~~~sT~ 180 (271)
T PRK00343 171 VKPGVHISTA 180 (271)
T ss_pred EeCCCCcChH
Confidence 9999888764
No 73
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.34 E-value=5.6e-11 Score=135.75 Aligned_cols=319 Identities=13% Similarity=0.112 Sum_probs=174.9
Q ss_pred CCcccHHHHHHHHHHHHH--CCCeEE---EEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHh
Q 002674 25 HGFGHATRVVEVVRNLIS--AGHDVH---VVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETA 99 (894)
Q Consensus 25 ~G~GHv~r~laLA~~L~~--~Gh~Vt---~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~ 99 (894)
-|.|-=.-+++|+++|++ .|++|. +++....+. ...+..-+ .+. ..+.|... .......+.....
T Consensus 5 nghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e-~~~ip~~g-~~~--~~~sgg~~----~~~~~~~~~~~~~-- 74 (396)
T TIGR03492 5 NGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQ-NLGIPIIG-PTK--ELPSGGFS----YQSLRGLLRDLRA-- 74 (396)
T ss_pred CCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHh-hCCCceeC-CCC--CCCCCCcc----CCCHHHHHHHHHh--
Confidence 355667778999999998 699999 887664331 22221101 011 11222111 0111122222222
Q ss_pred hcchHHhHHHHHHHHhcC--CCcEEEECCchhHHHHHHHhCCcEEEE----ecCchhHH-----HHHHHhhhccchHHHH
Q 002674 100 VAPRKSILKDEVEWLNSI--KADLVVSDVVPVACRAAADAGIRSVCV----TNFSWDFI-----YAEYVMAAGHHHRSIV 168 (894)
Q Consensus 100 ~~~~~~ll~~~~~~L~~~--~PDlVV~D~~~~a~~aA~~lgIP~V~i----sn~~~~~~-----~~~~~~~~~~~~~~i~ 168 (894)
..-....+...+++++ +||+|++...+.++++|...|+|++.+ +|+.|... .+.|..-.|..+.++-
T Consensus 75 --gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e 152 (396)
T TIGR03492 75 --GLVGLTLGQWRALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWE 152 (396)
T ss_pred --hHHHHHHHHHHHHHHHhhcCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHHH
Confidence 1122334557788888 999999877666888999999999884 45443210 0001000111111110
Q ss_pred -HHHHhhccccceeeecCCCCC---CCCC-Cce--eecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCChh----
Q 002674 169 -WQIAEDYSHCEFLIRLPGYCP---MPAF-RDV--IDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGW---- 237 (894)
Q Consensus 169 -~~l~~~y~~~~~ll~~p~~~~---~p~~-~~v--~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~---- 237 (894)
+.+.. ..++.++ .++... ++.. .++ ++.|.........+ . +++++.++|++..||.+...
T Consensus 153 ~n~l~~--~~a~~v~-~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~----~--~l~~~~~~lllLpGSR~ae~~~~l 223 (396)
T TIGR03492 153 RWLMRS--RRCLAVF-VRDRLTARDLRRQGVRASYLGNPMMDGLEPPER----K--PLLTGRFRIALLPGSRPPEAYRNL 223 (396)
T ss_pred HHHhhc--hhhCEEe-CCCHHHHHHHHHCCCeEEEeCcCHHhcCccccc----c--ccCCCCCEEEEECCCCHHHHHccH
Confidence 11111 1233322 111100 0000 133 44454332211111 1 45567788899999887631
Q ss_pred -hhHH---hhCC-CCcEEEE-e-CCCCCC----------CC--------------CCeEECCCCCCHHHHHhhcCEEEec
Q 002674 238 -KLKE---EYLP-SGWKCLV-C-GASDSQ----------LP--------------PNFIKLPKDAYTPDFMAASDCMLGK 286 (894)
Q Consensus 238 -~l~~---~Ll~-~~~~~vv-~-G~~~~~----------lp--------------~nv~v~g~~~~vp~ll~~~d~~I~~ 286 (894)
.+.+ .+.. +++.+++ + |..... +. +++.+..|.++++++|++||++|+.
T Consensus 224 p~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADlvI~r 303 (396)
T TIGR03492 224 KLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLGIAM 303 (396)
T ss_pred HHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCEEEEC
Confidence 1222 2321 3555543 3 432211 11 1355556666789999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc----CcEEEEccCCCCcccHHHHHHHHHhcCCCc---------
Q 002674 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY----QGGVEMIRRDLLTGHWKPYLERAISLKPCY--------- 353 (894)
Q Consensus 287 ~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~----G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~--------- 353 (894)
+|..| .|++++|+|+|++|.. ..| .|+..+++. |.++.+...+. +.+.+.+.++++++..+
T Consensus 304 SGt~T-~E~a~lg~P~Ilip~~--~~q-~na~~~~~~~~l~g~~~~l~~~~~--~~l~~~l~~ll~d~~~~~~~~~~~~~ 377 (396)
T TIGR03492 304 AGTAT-EQAVGLGKPVIQLPGK--GPQ-FTYGFAEAQSRLLGGSVFLASKNP--EQAAQVVRQLLADPELLERCRRNGQE 377 (396)
T ss_pred cCHHH-HHHHHhCCCEEEEeCC--CCH-HHHHHHHhhHhhcCCEEecCCCCH--HHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99655 9999999999999954 456 599888774 77777765443 68888898988765321
Q ss_pred -cCCCCHHHHHHHHHHHH
Q 002674 354 -EGGINGGEVAAHILQET 370 (894)
Q Consensus 354 -~~~~~g~~~~A~~i~~~ 370 (894)
...+++++++++.|.+.
T Consensus 378 ~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 378 RMGPPGASARIAESILKQ 395 (396)
T ss_pred hcCCCCHHHHHHHHHHHh
Confidence 13556677777666553
No 74
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.30 E-value=3.9e-10 Score=132.10 Aligned_cols=308 Identities=15% Similarity=0.019 Sum_probs=163.6
Q ss_pred CceEEEEEecCCC---C-cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCH
Q 002674 13 SKHLVFAYYVTGH---G-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDR 88 (894)
Q Consensus 13 m~~~~Il~~v~~~---G-~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~ 88 (894)
+++|+|++++... . .|=..+...++++|.++||+|++++..+... ... .++.+... ...... ... ..
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~-~~~---~g~~v~~~-~~~~~~---~~~-~~ 126 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP-QEF---HGAKVIGS-WSFPCP---FYQ-KV 126 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC-ccc---cCceeecc-CCcCCc---cCC-Cc
Confidence 6678887775322 1 3445788999999999999999998754211 000 01111000 000000 000 00
Q ss_pred HHHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCc----hhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccch
Q 002674 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHH 164 (894)
Q Consensus 89 ~~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~----~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~ 164 (894)
...+. ......+++++.+||+|+++.. +.+..+++..++|+|...+..+......+.. ....
T Consensus 127 ------~~~~~------~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~--~~~~ 192 (465)
T PLN02871 127 ------PLSLA------LSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTF--SWLV 192 (465)
T ss_pred ------eeecc------CCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccc--hhhH
Confidence 00000 0113456778899999997652 2344567888999986422111110000000 0000
Q ss_pred HHHHHHHHhhccccceeeecCCCC--------CC-CCCCceeecCccccc--CccChHHHHHHhCCCCCCcEEEEEcCCC
Q 002674 165 RSIVWQIAEDYSHCEFLIRLPGYC--------PM-PAFRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQ 233 (894)
Q Consensus 165 ~~i~~~l~~~y~~~~~ll~~p~~~--------~~-p~~~~v~~vp~~~~~--~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~ 233 (894)
..+.......+..++.++..+... .. +....+++.|+.... +.....+.+..+....+...++++.|+.
T Consensus 193 ~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 193 KPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCC
Confidence 011000111223344333221100 00 111123334443221 2222344555553222233467788888
Q ss_pred CCh--hh-hHHhhC-CCCcEEEEeCCCCCC-------CCCCeEECCCC--CCHHHHHhhcCEEEecCC----hhHHHHHH
Q 002674 234 PAG--WK-LKEEYL-PSGWKCLVCGASDSQ-------LPPNFIKLPKD--AYTPDFMAASDCMLGKIG----YGTVSEAL 296 (894)
Q Consensus 234 ~~~--~~-l~~~Ll-~~~~~~vv~G~~~~~-------lp~nv~v~g~~--~~vp~ll~~~d~~I~~~G----~~t~~Eal 296 (894)
+.. .+ +.+.+. .++++++++|.+... -..||.++|++ +.++++|+.+|+||..+. ..++.|||
T Consensus 273 ~~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAm 352 (465)
T PLN02871 273 GAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAM 352 (465)
T ss_pred chhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHH
Confidence 763 22 223221 157888888876421 13578889987 467899999999997653 35789999
Q ss_pred HcCCcEEEEeCCCCCchHHHHHHHHH---cCcEEEEccCCCCcccHHHHHHHHHhcCC
Q 002674 297 AYKLPFVFVRRDYFNEEPFLRNMLEF---YQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (894)
Q Consensus 297 ~~G~P~l~ip~~~~~eq~~na~~l~~---~G~g~~~~~~~~~~~~l~~~l~~ll~~~~ 351 (894)
++|+|+|+....+..| .++. .+.|.+++..+. +.+.++|.++++++.
T Consensus 353 A~G~PVI~s~~gg~~e------iv~~~~~~~~G~lv~~~d~--~~la~~i~~ll~~~~ 402 (465)
T PLN02871 353 ASGVPVVAARAGGIPD------IIPPDQEGKTGFLYTPGDV--DDCVEKLETLLADPE 402 (465)
T ss_pred HcCCCEEEcCCCCcHh------hhhcCCCCCceEEeCCCCH--HHHHHHHHHHHhCHH
Confidence 9999999887544333 3455 677988887664 588999999997663
No 75
>PLN02451 homoserine kinase
Probab=99.29 E-value=2.6e-11 Score=136.36 Aligned_cols=122 Identities=22% Similarity=0.304 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (894)
|.+.-++..++++.|.+. .|++|.|.++||+|+|||||||..+|++.|++.++|.++++++|++++.++|..++|..
T Consensus 115 Nlv~~a~~~~~~~~g~~~-~gv~I~i~k~IP~g~GLGSSaA~avA~l~aln~l~g~~ls~~eL~~la~~~E~~v~g~h-- 191 (370)
T PLN02451 115 NCAGIAAIATMKLLGIRS-VGLSLSLHKGLPLGSGLGSSAASAAAAAVAVNELFGSPLGKDDLVLAGLESEAKVSGYH-- 191 (370)
T ss_pred CcHHHHHHHHHHHcCCCC-CCEEEEEeCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhchhcCCC--
Confidence 555555566777777643 59999999999999999999999999999999999999999999999999999888752
Q ss_pred hhhhHH-hhcCCCCeEEEEEecCCceeEEeecC--CCeEEEEEeCCCCcccC
Q 002674 691 VMDQMA-SACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 691 ~mDq~a-s~~G~~~~~~~~~~~~~~~~~~v~~p--~~~~~vv~~sgv~~~~~ 739 (894)
+||++ +++||. ++.....+... ..+++| +++.++++.++...+|.
T Consensus 192 -~Dnva~a~~GG~--v~~~~~~~~~~-~~~~~p~~~~~~~Vlv~P~~~~sT~ 239 (370)
T PLN02451 192 -ADNIAPALMGGF--VLIRSYEPLHL-IPLRFPSAKDLFFVLVSPDFEAPTK 239 (370)
T ss_pred -ccchhHhhcCCE--EEEEecCCCeE-EEeecCCCCCeEEEEEcCCCCccHH
Confidence 79996 688983 22222333333 455565 67999999998887653
No 76
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.21 E-value=4.1e-10 Score=123.14 Aligned_cols=116 Identities=16% Similarity=0.143 Sum_probs=91.7
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCC
Q 002674 609 WAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAP 688 (894)
Q Consensus 609 W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~ 688 (894)
+.|++.-++..+.+..|... .|++|.|.++||+|+|||||||..+|++.+++.++|.++++++++++|.+.|
T Consensus 69 ~~Nlv~ka~~~~~~~~g~~~-~~~~i~i~k~IP~~~GLGsssa~aaa~l~~l~~l~~~~ls~~el~~la~~ig------- 140 (290)
T PRK14608 69 DDNLVLRAARALRARVGPGL-PPGAFHLEKNLPVAAGIGGGSADAAAALRLLARLWGLALDDERLAALALSLG------- 140 (290)
T ss_pred CCcHHHHHHHHHHHHhCCCC-CceEEEEEeCCcCcCCchHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC-------
Confidence 57888887777776666322 5899999999999999999999999999999999999999999999999753
Q ss_pred CChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 689 CGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 689 ~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
.|-..+++||. .+..- ..+..++++.++++.+++++++.+.+|.
T Consensus 141 ---~dv~~~l~gg~---~~~~g-~g~~~~~l~~~~~~~~vv~~p~~~~sT~ 184 (290)
T PRK14608 141 ---ADVPVCLDSRP---LIMRG-IGEELTPLPGLPSLPAVLVNPGVPVATP 184 (290)
T ss_pred ---CCcchhhcCCe---EEEEe-cCCEeEECCCCCCcEEEEECCCCCcChH
Confidence 38788999984 23322 2222245543467889999999888764
No 77
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.21 E-value=1.6e-09 Score=120.73 Aligned_cols=289 Identities=16% Similarity=0.110 Sum_probs=155.0
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHHh
Q 002674 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (894)
Q Consensus 27 ~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~l 106 (894)
.|+..++..++++|.++||+|++++........... ....++..... .. ...... .. .
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~--~~~~~~---------------~~-~ 71 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA--RVVPVPSVPLP--GY--PEIRLA---------------LP-P 71 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC--CceeecccccC--cc--cceEec---------------cc-c
Confidence 689999999999999999999999875421111000 01111110000 00 000000 00 1
Q ss_pred HHHHHHHHhcCCCcEEEECC----chhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHH-HHhhcccccee
Q 002674 107 LKDEVEWLNSIKADLVVSDV----VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQ-IAEDYSHCEFL 181 (894)
Q Consensus 107 l~~~~~~L~~~~PDlVV~D~----~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~-l~~~y~~~~~l 181 (894)
.....+.+++.+||+|+.+. ...+..+++..++|++..-+..|......+.. ......... ....+..++.+
T Consensus 72 ~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~i 148 (364)
T cd03814 72 RRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGL---GPLSWLAWAYLRWFHNRADRV 148 (364)
T ss_pred hhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhccc---chHhHhhHHHHHHHHHhCCEE
Confidence 12234456788999999764 23345667788999876532222211110000 000111011 11122333333
Q ss_pred eecCCCCC--C--CCCCceeec--Cccccc--CccChHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hhHH---hhCC-C
Q 002674 182 IRLPGYCP--M--PAFRDVIDV--PLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLP-S 246 (894)
Q Consensus 182 l~~p~~~~--~--p~~~~v~~v--p~~~~~--~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~-~l~~---~Ll~-~ 246 (894)
+....... . ....++..+ |..... +.......++.++ ...+.++++.|+.... . .+.+ .+.. +
T Consensus 149 ~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~ 226 (364)
T cd03814 149 LVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRP 226 (364)
T ss_pred EeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcC
Confidence 32111100 0 001122222 222111 1122233344444 2345677888876542 1 2333 2322 4
Q ss_pred CcEEEEeCCCCCC-----CCCCeEECCCC--CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHH
Q 002674 247 GWKCLVCGASDSQ-----LPPNFIKLPKD--AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPF 315 (894)
Q Consensus 247 ~~~~vv~G~~~~~-----lp~nv~v~g~~--~~vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~eq~~ 315 (894)
++.++++|.+... ...|+.+.|+. +.++++|+.||++|..+. .+++.|||++|+|+|+.+...
T Consensus 227 ~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~------ 300 (364)
T cd03814 227 PVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG------ 300 (364)
T ss_pred CceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC------
Confidence 6888888865432 46789988865 356789999999997653 378999999999999987543
Q ss_pred HHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 316 LRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 316 na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+.+.++..+.|..++..+. +.+.++|.+++.++
T Consensus 301 ~~~~i~~~~~g~~~~~~~~--~~l~~~i~~l~~~~ 333 (364)
T cd03814 301 PADIVTDGENGLLVEPGDA--EAFAAALAALLADP 333 (364)
T ss_pred chhhhcCCcceEEcCCCCH--HHHHHHHHHHHcCH
Confidence 3344666788988876653 56899999998766
No 78
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.20 E-value=2e-09 Score=121.57 Aligned_cols=297 Identities=14% Similarity=0.121 Sum_probs=157.5
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHH
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~ 96 (894)
+|++.......|.-.....+++.|.++||+|++++...+...... .+...+..+ +... . ...... .+
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~--~~~~~~~~~--~~~~-----~--~~~~~~-~~- 68 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY--SPNIFFHEV--EVPQ-----Y--PLFQYP-PY- 68 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh--ccCeEEEEe--cccc-----c--chhhcc-hh-
Confidence 333344334457777788999999999999999986543211111 122222211 1000 0 000000 00
Q ss_pred HHhhcchHHhHHHHHHHHhcCCCcEEEECCc---hhHHHHHH-Hh---CCcEEEEecCc-hhHHHHHHHhhhccchHHHH
Q 002674 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAA-DA---GIRSVCVTNFS-WDFIYAEYVMAAGHHHRSIV 168 (894)
Q Consensus 97 ~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~---~~a~~aA~-~l---gIP~V~isn~~-~~~~~~~~~~~~~~~~~~i~ 168 (894)
. ........+++++.+||+|+.+.. .....++. .. ++|.+...+.. +..... ......+.
T Consensus 69 ~------~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~------~~~~~~~~ 136 (371)
T cd04962 69 D------LALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQ------DPSFQPAT 136 (371)
T ss_pred H------HHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccc------cccchHHH
Confidence 0 012234466788899999998642 22333333 22 79987653211 100000 00000010
Q ss_pred HHHHhhccccceeeecCCC--------CCCCCCCceeecCccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCCh---
Q 002674 169 WQIAEDYSHCEFLIRLPGY--------CPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--- 236 (894)
Q Consensus 169 ~~l~~~y~~~~~ll~~p~~--------~~~p~~~~v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--- 236 (894)
...+..++.++..+.. ...+....+++.|+.... ....+...++.++.++++ .+++++|.....
T Consensus 137 ---~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~g~l~~~K~~ 212 (371)
T cd04962 137 ---RFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGE-KVLIHISNFRPVKRI 212 (371)
T ss_pred ---HHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHHhcCCCCCC-eEEEEecccccccCH
Confidence 1111222222211110 000111112233332211 112233455666765544 567778877653
Q ss_pred hhhHHh---hC-CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEEEecC----ChhHHHHHHH
Q 002674 237 WKLKEE---YL-PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGKI----GYGTVSEALA 297 (894)
Q Consensus 237 ~~l~~~---Ll-~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~~I~~~----G~~t~~Eal~ 297 (894)
..+++. +. ..+++++++|.+... +.+++++.|+.+.++++|+.+|++|..+ ...++.|||+
T Consensus 213 ~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma 292 (371)
T cd04962 213 DDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMA 292 (371)
T ss_pred HHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHH
Confidence 223332 22 245788888876421 3567999999888999999999999653 3468999999
Q ss_pred cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 298 YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 298 ~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+|+|+|+.+.++. .+.+++...|..++..+. +.+.+++.++++++
T Consensus 293 ~g~PvI~s~~~~~------~e~i~~~~~G~~~~~~~~--~~l~~~i~~l~~~~ 337 (371)
T cd04962 293 CGVPVVASNAGGI------PEVVKHGETGFLVDVGDV--EAMAEYALSLLEDD 337 (371)
T ss_pred cCCCEEEeCCCCc------hhhhcCCCceEEcCCCCH--HHHHHHHHHHHhCH
Confidence 9999999875433 334555567887776554 57888998988665
No 79
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism]
Probab=99.19 E-value=5.8e-10 Score=119.56 Aligned_cols=119 Identities=22% Similarity=0.325 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCCh
Q 002674 612 YVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGV 691 (894)
Q Consensus 612 yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~ 691 (894)
.+.-++..+++..|.+. ++++.++++||.|+|||||||.+||.+.|++++++.+++++++.+++-+.|.|.
T Consensus 60 ~~~~~~~~~~~~~~~~~--~~~i~i~k~IP~~rGLGSSaAsiVAal~aan~l~~~~L~~~~ll~~a~~~EgHp------- 130 (299)
T COG0083 60 LVYQAALKFLEALGIEA--GVKIRIEKGIPLGRGLGSSAASIVAALAAANELAGLPLSKEELLQLALEIEGHP------- 130 (299)
T ss_pred eHHHHHHHHHHHhCCCc--cEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCC-------
Confidence 44455566777888764 599999999999999999999999999999999999999999999999999742
Q ss_pred hhhH-HhhcCCCCeEEEEEe-cCCceeEEeecCCCeEEEEEeCCCCc------ccCCCCch
Q 002674 692 MDQM-ASACGEANKLLAMVC-QPAELLGVVEIPSHIRFWGIDSGIRH------SVGGADYG 744 (894)
Q Consensus 692 mDq~-as~~G~~~~~~~~~~-~~~~~~~~v~~p~~~~~vv~~sgv~~------~~~~~~y~ 744 (894)
||. +|++||. .+... .+... ..+++|.++.++++-.+.+- ...+..|.
T Consensus 131 -DNVapa~lGG~---~l~~~~~~~~~-~~v~~~~~~~~v~~iP~~e~sT~~aR~vLP~~~~ 186 (299)
T COG0083 131 -DNVAPAVLGGL---VLVEEESGIIS-VKVPFPSDLKLVVVIPNFEVSTAEARKVLPKSYS 186 (299)
T ss_pred -chHHHHhhCCE---EEEeecCCceE-EEccCCcceEEEEEeCCccccHHHHHHhccccCC
Confidence 666 7999993 23332 23322 56777789999998777654 44556554
No 80
>TIGR00191 thrB homoserine kinase. P.aeruginosa homoserine kinase seems not to be homologous (see PROSITE:PDOC0054)
Probab=99.15 E-value=3.4e-10 Score=124.80 Aligned_cols=116 Identities=22% Similarity=0.340 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
.|.+..++..+++..|... .|++|.|.++||.|+|||||||..+|++.|++.+++.++++++|+++|.++|.+
T Consensus 60 ~Nlv~~a~~~~~~~~g~~~-~g~~i~i~~~IP~~~GLGSSsa~~vA~l~a~~~l~~~~l~~~el~~~a~~~E~h------ 132 (302)
T TIGR00191 60 DNLIYQVAKRFLDQLGIRM-PPVKVTLEKNIPLGRGLGSSAAAIVAALAAANELCGLPLSKERLLDYASELEGH------ 132 (302)
T ss_pred cccHHHHHHHHHHHcCCCC-CCEEEEEEcCCCCcCCCChHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHhcCC------
Confidence 3566666777777777643 589999999999999999999999999999999999999999999999999962
Q ss_pred Chhhh-HHhhcCCCCeEEEEEecCCceeEEeecC--CCeEEEEEeCCCCccc
Q 002674 690 GVMDQ-MASACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGIDSGIRHSV 738 (894)
Q Consensus 690 G~mDq-~as~~G~~~~~~~~~~~~~~~~~~v~~p--~~~~~vv~~sgv~~~~ 738 (894)
.|+ .++++||. .+...+.... ..++++ +++.+++++++.+-+|
T Consensus 133 --~Dnv~~~l~GG~---~~~~~~~~~~-~~~~~~~~~~~~~vl~~p~~~~sT 178 (302)
T TIGR00191 133 --PDNVAPALLGGF---QLAFVEDDKL-EVLKIPIFSKLDWVLAIPNIEVST 178 (302)
T ss_pred --cccHHHHhccCE---EEEEEcCCce-EEEEeCCCCCEEEEEEECCCcccH
Confidence 476 46889994 3333233223 455544 6899999999987665
No 81
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.11 E-value=1.2e-08 Score=117.71 Aligned_cols=119 Identities=14% Similarity=0.160 Sum_probs=80.5
Q ss_pred CCCcEEEEEcCCCCCh---hhhHHh---hC--------CCCcEEEEeCCCCCC---------CC-CCeEEC-CCC--CCH
Q 002674 221 DDVKLLILNFGGQPAG---WKLKEE---YL--------PSGWKCLVCGASDSQ---------LP-PNFIKL-PKD--AYT 273 (894)
Q Consensus 221 ~~~p~Vlvs~Gs~~~~---~~l~~~---Ll--------~~~~~~vv~G~~~~~---------lp-~nv~v~-g~~--~~v 273 (894)
++++.++++.|+.... ..++++ +. .++++++++|.+... +. +|+.++ ++. +.+
T Consensus 229 ~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~ 308 (415)
T cd03816 229 EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDY 308 (415)
T ss_pred CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHH
Confidence 4556778888877653 123332 21 145788888876521 11 466654 554 467
Q ss_pred HHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 274 PDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 274 p~ll~~~d~~I~----~~G---~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
+++|+.+|++|. ..| .+++.|||++|+|+|+...+ ...+.+++.+.|+.+. +.+.+.++|.++
T Consensus 309 ~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~------~~~eiv~~~~~G~lv~----d~~~la~~i~~l 378 (415)
T cd03816 309 PKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK------CIDELVKHGENGLVFG----DSEELAEQLIDL 378 (415)
T ss_pred HHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC------CHHHHhcCCCCEEEEC----CHHHHHHHHHHH
Confidence 899999999984 112 35799999999999997643 2345566777888873 357899999999
Q ss_pred Hhc
Q 002674 347 ISL 349 (894)
Q Consensus 347 l~~ 349 (894)
+++
T Consensus 379 l~~ 381 (415)
T cd03816 379 LSN 381 (415)
T ss_pred Hhc
Confidence 987
No 82
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.10 E-value=2.1e-09 Score=117.67 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
.|.+..++..+.+..+.. .|++|.|.++||+++|||||||..+|++.+++.++|.++++++++++|.+.|-
T Consensus 64 ~nl~~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSA~aaA~l~al~~l~g~~ls~~el~~~a~~ig~------- 134 (287)
T PRK14616 64 SNLCIRAAKALQEYAGVS--KGVSITLDKRVPFGAGLGGGSSDAATVLRVLNELWEINAPSADLHRLAVKLGA------- 134 (287)
T ss_pred cHHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCchHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC-------
Confidence 456655666666666753 69999999999999999999999999999999999999999999999998753
Q ss_pred ChhhhHHhh-cCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 690 GVMDQMASA-CGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 690 G~mDq~as~-~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
|--+.+ +||. + +.....+..+.++.+..+.++++++++.-+|.
T Consensus 135 ---Dvp~~l~~gg~--~--~~~g~g~~~~~~~~~~~~~~vvv~P~~~vsT~ 178 (287)
T PRK14616 135 ---DVPYFLEMKGL--A--YATGIGDELEDLQLTLPFHIVTVFPEEHISTV 178 (287)
T ss_pred ---CcceEeccCCc--E--EEEEcCceeEECCcCCCcEEEEECCCCCcCHH
Confidence 412222 3552 1 22222222234444445779999988877663
No 83
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.09 E-value=1.1e-08 Score=114.90 Aligned_cols=134 Identities=23% Similarity=0.198 Sum_probs=89.3
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCC--C-h-hhhHHh---hC---CCCcEEEEeCCCCCC----CCCCeEECCCCC---
Q 002674 209 SRKEVRKELGIEDDVKLLILNFGGQP--A-G-WKLKEE---YL---PSGWKCLVCGASDSQ----LPPNFIKLPKDA--- 271 (894)
Q Consensus 209 ~~~e~r~~lgl~~~~p~Vlvs~Gs~~--~-~-~~l~~~---Ll---~~~~~~vv~G~~~~~----lp~nv~v~g~~~--- 271 (894)
.+...++.++++++++++++...+.. . + ..+++. +. .++++++++|..... +..++...++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~~~~~~v~~~g~~~~~~ 256 (365)
T cd03825 177 DKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDLPFPVHYLGSLNDDE 256 (365)
T ss_pred cHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhccCCCceEecCCcCCHH
Confidence 44566777887766654444332222 1 1 123332 22 256778888876532 456788888876
Q ss_pred CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHH
Q 002674 272 YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll 347 (894)
.++.+|+.||++|..+ ..+++.|||++|+|+|+...++..|. +...+.|..++..+ .+.|.+++.+++
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~------~~~~~~g~~~~~~~--~~~~~~~l~~l~ 328 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDI------VDHGVTGYLAKPGD--PEDLAEGIEWLL 328 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhh------eeCCCceEEeCCCC--HHHHHHHHHHHH
Confidence 3568899999999864 24789999999999999876544442 44445787777655 358899999998
Q ss_pred hcC
Q 002674 348 SLK 350 (894)
Q Consensus 348 ~~~ 350 (894)
+++
T Consensus 329 ~~~ 331 (365)
T cd03825 329 ADP 331 (365)
T ss_pred hCH
Confidence 765
No 84
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.09 E-value=1.7e-09 Score=117.70 Aligned_cols=113 Identities=15% Similarity=0.147 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (894)
|.+.-++..+++..+.. .|+++.|.++||.++|||||||..+|++.+++.+++.+++++++.++|... |
T Consensus 67 nl~~~a~~~~~~~~~~~--~~~~i~i~~~IP~~~GLGsssa~~~a~~~al~~~~~~~l~~~~l~~~a~~~---------G 135 (280)
T PRK14614 67 NIAWRAADALLDLSGRE--VGIDISITKNIPVAAGLGGGSSDAATVLMGVNELLGLGLSDERLMEIGVKL---------G 135 (280)
T ss_pred cHHHHHHHHHHHHhCCC--CceEEEEEecCCCcCccHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh---------C
Confidence 55555566666677753 589999999999999999999999999999999999999999999998753 3
Q ss_pred hhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccC
Q 002674 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 691 ~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
+|...+++||. .+.. ...+..+.++.+++..++++++++..+|.
T Consensus 136 -~Dv~~~l~gg~---~~~~-g~ge~~~~l~~~~~~~ivl~~p~~~~sT~ 179 (280)
T PRK14614 136 -ADVPFFIFKKT---ALAE-GIGDKLTAVEGVPPLWVVLVNPGLHVSTA 179 (280)
T ss_pred -CCcceeeeCCc---EEEE-EcCceeEECCCCCCcEEEEECCCCCCCHH
Confidence 37777888873 2222 22222245555567889999999888764
No 85
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.07 E-value=3.1e-08 Score=110.38 Aligned_cols=296 Identities=20% Similarity=0.178 Sum_probs=157.8
Q ss_pred CCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcch
Q 002674 24 GHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPR 103 (894)
Q Consensus 24 ~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~ 103 (894)
....|+..++..++++|.++||+|++++........... ...+.. ... .. . ........ .
T Consensus 11 p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~---~~~~~~--~~~-------~~-~---~~~~~~~~----~ 70 (374)
T cd03817 11 PQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEE---VVVVRP--FRV-------PT-F---KYPDFRLP----L 70 (374)
T ss_pred CCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccc---cccccc--ccc-------cc-c---hhhhhhcc----c
Confidence 345699999999999999999999999865422111100 000000 000 00 0 00000000 0
Q ss_pred HHhHHHHHHHHhcCCCcEEEECCch----hHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHH--HHHhhccc
Q 002674 104 KSILKDEVEWLNSIKADLVVSDVVP----VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW--QIAEDYSH 177 (894)
Q Consensus 104 ~~ll~~~~~~L~~~~PDlVV~D~~~----~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~--~l~~~y~~ 177 (894)
. ......+.++..+||+|+.+..+ .+..+++..++|++...+..+.. +..+............. .....+..
T Consensus 71 ~-~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (374)
T cd03817 71 P-IPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED-YTHYVPLGRLLARAVVRRKLSRRFYNR 148 (374)
T ss_pred c-HHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH-HHHHHhcccchhHHHHHHHHHHHHhhh
Confidence 0 11223345788999999987533 23455677899987654332221 11111100000001111 11222334
Q ss_pred cceeeecCCCC-----CCCCCCceeecC--ccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHh---h
Q 002674 178 CEFLIRLPGYC-----PMPAFRDVIDVP--LVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---Y 243 (894)
Q Consensus 178 ~~~ll~~p~~~-----~~p~~~~v~~vp--~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~---L 243 (894)
++.++..+... ......++..+| ..... ....+...++.++..+ .+.+++..|+.... ..+++. +
T Consensus 149 ~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 149 CDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPE-DEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccCccchhHHHHhcCCCC-CCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 44443222110 000001222233 22111 1122233355555544 44577788876642 123332 2
Q ss_pred CC--CCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEE
Q 002674 244 LP--SGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVF 304 (894)
Q Consensus 244 l~--~~~~~vv~G~~~~-----------~lp~nv~v~g~~~--~vp~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ 304 (894)
.. ++++++++|.+.. .+.+|+.+.|+.+ .++.+|+.||++|..+ ...++.|||++|+|+|+
T Consensus 228 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~ 307 (374)
T cd03817 228 LKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVA 307 (374)
T ss_pred HHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEE
Confidence 22 5678888886542 1467899998873 5678999999999654 34789999999999999
Q ss_pred EeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCC
Q 002674 305 VRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (894)
Q Consensus 305 ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~ 351 (894)
.+.+.. ++.+...+.|..++..+. ++.+++.++++++.
T Consensus 308 ~~~~~~------~~~i~~~~~g~~~~~~~~---~~~~~i~~l~~~~~ 345 (374)
T cd03817 308 VDAPGL------PDLVADGENGFLFPPGDE---ALAEALLRLLQDPE 345 (374)
T ss_pred eCCCCh------hhheecCceeEEeCCCCH---HHHHHHHHHHhChH
Confidence 875432 344666678888876543 78899999997763
No 86
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.06 E-value=1.9e-08 Score=114.16 Aligned_cols=294 Identities=16% Similarity=0.102 Sum_probs=158.5
Q ss_pred EEEEEecCCCCcccH-HHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHH
Q 002674 16 LVFAYYVTGHGFGHA-TRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv-~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~ 94 (894)
.+|++++.+.+.|.+ .-.+.+++.|.++||++++++......+...+...++.+...... . ..+
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~-------~-~~~------- 66 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQ-------P-GKD------- 66 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCC-------C-CCC-------
Confidence 467777877775655 666799999999999998887433212222111112222221000 0 000
Q ss_pred HHHHhhcchHHhHHHHHHHHhcCCCcEEEECC--chhHHHHHHHhCCcEEEEecCchhHH-HH-HHHhhhccchHHHHHH
Q 002674 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDV--VPVACRAAADAGIRSVCVTNFSWDFI-YA-EYVMAAGHHHRSIVWQ 170 (894)
Q Consensus 95 ~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~--~~~a~~aA~~lgIP~V~isn~~~~~~-~~-~~~~~~~~~~~~i~~~ 170 (894)
+. ......+++++.+||+|+++. ...+..+++..++|...++..+|... .. .... .. ....
T Consensus 67 ~~---------~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-----~~-~~~~ 131 (374)
T TIGR03088 67 VA---------VYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNWK-----YR-WLRR 131 (374)
T ss_pred hH---------HHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchhhHHH-----HH-HHHH
Confidence 00 112345678889999999875 23344566778999755543332110 00 0000 00 0000
Q ss_pred HHhhccccceeeecCCC--------CCCCC-CCceeecCcccccCcc---ChHHHHHHhCCCCCCcEEEEEcCCCCCh--
Q 002674 171 IAEDYSHCEFLIRLPGY--------CPMPA-FRDVIDVPLVVRRLHK---SRKEVRKELGIEDDVKLLILNFGGQPAG-- 236 (894)
Q Consensus 171 l~~~y~~~~~ll~~p~~--------~~~p~-~~~v~~vp~~~~~~~~---~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-- 236 (894)
+.. ...+.++..+.. ...+. ...+++.|+....... .+...++.... .+.+.++++.|.....
T Consensus 132 ~~~--~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~vGrl~~~Kg 208 (374)
T TIGR03088 132 LYR--PLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFF-ADESVVVGTVGRLQAVKD 208 (374)
T ss_pred HHH--hcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcC-CCCCeEEEEEecCCcccC
Confidence 000 011111111100 00111 1123334443221111 11122222222 3456788899987652
Q ss_pred -hhhHHh---hC------CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEEEecC----ChhH
Q 002674 237 -WKLKEE---YL------PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGKI----GYGT 291 (894)
Q Consensus 237 -~~l~~~---Ll------~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~~I~~~----G~~t 291 (894)
..++++ +. .++++++++|.+... +..++.+.|+.++++++|+.+|++|..+ -..+
T Consensus 209 ~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~ 288 (374)
T TIGR03088 209 QPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNT 288 (374)
T ss_pred HHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchH
Confidence 123332 21 126788888866421 3466888888888999999999999642 3468
Q ss_pred HHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 292 ~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+.|||++|+|+|+.+.++. .+.++....|..++..+. +.+.++|.++++++
T Consensus 289 ~lEAma~G~Pvv~s~~~g~------~e~i~~~~~g~~~~~~d~--~~la~~i~~l~~~~ 339 (374)
T TIGR03088 289 ILEAMASGLPVIATAVGGN------PELVQHGVTGALVPPGDA--VALARALQPYVSDP 339 (374)
T ss_pred HHHHHHcCCCEEEcCCCCc------HHHhcCCCceEEeCCCCH--HHHHHHHHHHHhCH
Confidence 9999999999999875443 334555567888876664 58899999998665
No 87
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.06 E-value=3.5e-09 Score=114.43 Aligned_cols=114 Identities=11% Similarity=0.162 Sum_probs=89.1
Q ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCC
Q 002674 608 KWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA 687 (894)
Q Consensus 608 ~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~ 687 (894)
.|.|++..++..+.+..+ . .|++|.+.++||+|+|||||||..+|++.|++++++.++++++++++|.+.
T Consensus 62 ~~~Nlv~~a~~~~~~~~~--~-~~~~i~i~k~IP~~aGLGssss~aaa~l~al~~~~~~~l~~~~l~~la~~i------- 131 (269)
T PRK14609 62 PEDNLVVKAYNLLKKDFP--L-PPVHIHLYKHIPIGAGLGGGSSDAAFMLKLLNDKFNLGLSDEELEAYAATL------- 131 (269)
T ss_pred ccccHHHHHHHHHHHHcC--C-CCeEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh-------
Confidence 467899888877766655 2 489999999999999999999999999999999999999999999999975
Q ss_pred CCChhhhHHhhcCCCCeEEEEEecCCceeEEeecC-CCeEEEEEeCCCCccc
Q 002674 688 PCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP-SHIRFWGIDSGIRHSV 738 (894)
Q Consensus 688 ~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p-~~~~~vv~~sgv~~~~ 738 (894)
| +|...+++|+. + +..-+. +..++++.+ +++.++++++++.-+|
T Consensus 132 --G-aDvpffl~g~~--a-~~~G~G-e~l~~l~~~~~~~~~vlv~P~~~~sT 176 (269)
T PRK14609 132 --G-ADCAFFIRNKP--V-YATGIG-DIFSPIDLSLSGYYIALVKPDIHVST 176 (269)
T ss_pred --C-CCceEEccCCC--E-EEEEeC-CeeEECCCCCCCCEEEEECCCCCCCh
Confidence 3 48766667763 2 222222 322555433 5778999999988776
No 88
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.06 E-value=4.3e-08 Score=108.30 Aligned_cols=121 Identities=17% Similarity=0.067 Sum_probs=87.0
Q ss_pred CCcEEEEEcCCCCCh---hhhHH---hhC--CCCcEEEEeCCCCCC------------CCCCeEECCCCCCHHHHHhhcC
Q 002674 222 DVKLLILNFGGQPAG---WKLKE---EYL--PSGWKCLVCGASDSQ------------LPPNFIKLPKDAYTPDFMAASD 281 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~---~Ll--~~~~~~vv~G~~~~~------------lp~nv~v~g~~~~vp~ll~~~d 281 (894)
+.+.++++.|+.... ..+.+ .+. .++++++++|..... ...+|.+.|+.+.+.++|+.||
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 265 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAAD 265 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhcc
Confidence 345688888877653 12333 232 356888888875421 2457888888888899999999
Q ss_pred EEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 282 CMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 282 ~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
++|..+. .+++.|||++|+|+|+.+.+... +.+.+.+.|..++..+. +.|.++|.+++.++
T Consensus 266 i~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~------~~i~~~~~g~~~~~~~~--~~~~~~i~~l~~~~ 330 (359)
T cd03808 266 VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCR------EAVIDGVNGFLVPPGDA--EALADAIERLIEDP 330 (359)
T ss_pred EEEecCcccCcchHHHHHHHcCCCEEEecCCCch------hhhhcCcceEEECCCCH--HHHHHHHHHHHhCH
Confidence 9997653 47899999999999998754433 34566677888876653 58889999988665
No 89
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.05 E-value=3.9e-08 Score=108.15 Aligned_cols=286 Identities=15% Similarity=0.104 Sum_probs=151.4
Q ss_pred EEEecCCCC-ccc-HHHHHHHHHHHHHCCCeEEEEeCCCCcccccccC-CCceeEeeeccCCCcccccccccCHHHHHHH
Q 002674 18 FAYYVTGHG-FGH-ATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (894)
Q Consensus 18 Il~~v~~~G-~GH-v~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~-~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~ 94 (894)
|++++.+.+ .|+ ...+..++++|.++||+|++++..+.. ..... ...+.+..... . ... .
T Consensus 2 I~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~--~-------~~~------~ 64 (348)
T cd03820 2 ILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGE--PPFYELDPKIKVIDLGD--K-------RDS------K 64 (348)
T ss_pred eEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCC--CCccccCCccceeeccc--c-------ccc------c
Confidence 455666666 454 555678999999999999999876532 01000 01111111100 0 000 0
Q ss_pred HHHHhhcchHHhHHHHHHHHhcCCCcEEEECCch-hHHHHHHHhCC-cEEEEecCchhHHHHHHHhhhccchHHHHHHHH
Q 002674 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVVP-VACRAAADAGI-RSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (894)
Q Consensus 95 ~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~-~a~~aA~~lgI-P~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~ 172 (894)
... .. .......++++..+||+|++.... .........+. |.+...+........... ... ...
T Consensus 65 ~~~----~~-~~~~~~~~~l~~~~~d~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~---~~~ 130 (348)
T cd03820 65 LLA----RF-KKLRRLRKLLKNNKPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPDAYKKRLR------RLL---LRR 130 (348)
T ss_pred hhc----cc-cchHHHHHhhcccCCCEEEEcCchHHHHHHHHhhccccEEEecCCCccchhhhhH------HHH---HHH
Confidence 000 00 112344667888999999988744 33344445555 777653322110000000 000 011
Q ss_pred hhccccceeeecCCCC--CC--CCCCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHH---h
Q 002674 173 EDYSHCEFLIRLPGYC--PM--PAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKE---E 242 (894)
Q Consensus 173 ~~y~~~~~ll~~p~~~--~~--p~~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~---~ 242 (894)
..+..++.++..+... .. ....++..+|.-.... ..... ....+.+++++|+.... ..+++ .
T Consensus 131 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~vi~~~~~~~-----~~~~~---~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 131 LLYRRADAVVVLTEEDRALYYKKFNKNVVVIPNPLPFP-----PEEPS---SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred HHHhcCCEEEEeCHHHHHHhhccCCCCeEEecCCcChh-----hcccc---CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 2233334333221110 00 0001222222211100 00000 12334567777876552 12333 2
Q ss_pred hC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEE
Q 002674 243 YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFV 305 (894)
Q Consensus 243 Ll--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~i 305 (894)
+. .+++.++++|.+... +..++.+.++.+.++++|+.||++|..+. .+++.|||++|+|+|+.
T Consensus 203 l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~ 282 (348)
T cd03820 203 IAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISF 282 (348)
T ss_pred HHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEe
Confidence 32 367788888865421 35678888887788999999999998752 47899999999999987
Q ss_pred eCCCCCchHHHHHHHHHcC-cEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 306 RRDYFNEEPFLRNMLEFYQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 306 p~~~~~eq~~na~~l~~~G-~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+.....+ .+...+ .|..++..+. +.+.++|.++++++
T Consensus 283 ~~~~~~~------~~~~~~~~g~~~~~~~~--~~~~~~i~~ll~~~ 320 (348)
T cd03820 283 DCPTGPS------EIIEDGVNGLLVPNGDV--EALAEALLRLMEDE 320 (348)
T ss_pred cCCCchH------hhhccCcceEEeCCCCH--HHHHHHHHHHHcCH
Confidence 6432222 244455 7888876664 68999999998766
No 90
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.04 E-value=4.6e-09 Score=115.74 Aligned_cols=107 Identities=15% Similarity=0.155 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (894)
|.+..++..+++..|.. .|++|.|.++||+++|||||||..+|++.|++.++|.++++++|+++|.++|
T Consensus 65 nl~~~~~~~~~~~~~~~--~~~~I~i~s~IP~~~GLGSSSA~a~A~l~al~~~~g~~ls~~el~~~a~~ig--------- 133 (300)
T PRK03188 65 NLAWRAAELLAEHVGRA--PDVHLHIDKGIPVAGGMAGGSADAAAALVACDALWGLGLSRDELLELAAELG--------- 133 (300)
T ss_pred cHHHHHHHHHHHHhCCC--CCeEEEEEcCCcccCcchHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC---------
Confidence 45555666666677753 5899999999999999999999999999999999999999999999998753
Q ss_pred hhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCC
Q 002674 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (894)
Q Consensus 691 ~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sg 733 (894)
.|..++++||. ++. .+..+..+++..+.++.++++..+
T Consensus 134 -~dv~~~~~GG~---~~~-~~~g~~~~~~~~~~~~~~~lv~p~ 171 (300)
T PRK03188 134 -SDVPFALLGGT---ALG-TGRGEQLAPVLARGTFHWVLAFAD 171 (300)
T ss_pred -CCcchhhcCCe---EEE-EecCCEEEECCCCCCcEEEEEeCC
Confidence 37678889983 333 333332244444445555444333
No 91
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.03 E-value=3.2e-08 Score=110.92 Aligned_cols=129 Identities=23% Similarity=0.170 Sum_probs=89.5
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh--h-hhHH---hhC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHH
Q 002674 214 RKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTP 274 (894)
Q Consensus 214 r~~lgl~~~~p~Vlvs~Gs~~~~--~-~l~~---~Ll--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp 274 (894)
++..+.. +.+.++++.|+.... . .+++ .+. .++++++++|.+... +.+++.+.|+.+.++
T Consensus 183 ~~~~~~~-~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 261 (358)
T cd03812 183 RRELGIL-EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVP 261 (358)
T ss_pred HHHcCCC-CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHH
Confidence 4444443 345678888887653 2 2333 232 257888888865521 467899999888889
Q ss_pred HHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 275 DFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 275 ~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
++++.||++|..+ -.++++|||++|+|+|+...++..| .+.. +.+......+ ++.|.++|.++++++
T Consensus 262 ~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~------~i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~ 332 (358)
T cd03812 262 ELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEV------DLTD-LVKFLSLDES--PEIWAEEILKLKSED 332 (358)
T ss_pred HHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhh------hhcc-CccEEeCCCC--HHHHHHHHHHHHhCc
Confidence 9999999999753 3478999999999999987654433 3444 5555554433 478999999999888
Q ss_pred CC
Q 002674 351 PC 352 (894)
Q Consensus 351 ~~ 352 (894)
..
T Consensus 333 ~~ 334 (358)
T cd03812 333 RR 334 (358)
T ss_pred ch
Confidence 53
No 92
>TIGR00144 beta_RFAP_syn beta-RFAP synthase. This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis. In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.
Probab=99.03 E-value=6.3e-09 Score=115.35 Aligned_cols=111 Identities=15% Similarity=0.260 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
.|.+..++..+++..|. .|++|.|.++||.++|||||||+.+|++.|++.+++.++++++|++++.+ |..+
T Consensus 64 ~n~~~~~~~~~~~~~g~---~~~~i~i~~~IP~~~GLGSsaa~avA~~~a~~~l~~~~ls~~el~~~a~~------ge~s 134 (324)
T TIGR00144 64 RSRIMEAARKTLKHIGS---EGFHFTVRSMFPAHSGLGSGTQLSLAVGRLVSEYYGMKFTAREIAHIVGR------GGTS 134 (324)
T ss_pred HHHHHHHHHHHHHHhCC---CCEEEEEeecCCCccCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhC------CCCC
Confidence 45566666667766664 48999999999999999999999999999999999999999999999985 5555
Q ss_pred ChhhhHHhhcCCCCeEEEEEe----c--------------CCceeEEeecCCCeEEEEEeCCCC
Q 002674 690 GVMDQMASACGEANKLLAMVC----Q--------------PAELLGVVEIPSHIRFWGIDSGIR 735 (894)
Q Consensus 690 G~mDq~as~~G~~~~~~~~~~----~--------------~~~~~~~v~~p~~~~~vv~~sgv~ 735 (894)
| .|.+++.+||. .++. . +.....++++| +++++++-....
T Consensus 135 ~-~~va~~~~GG~----vv~~G~~~~~~~~~~~~~~~~~~~~~~~~r~~~p-~~~~vlviP~~~ 192 (324)
T TIGR00144 135 G-IGVASFEDGGF----IVDGGHSSKEKSDFLPSSASSAKPAPVIARYDFP-DWNIILAIPEID 192 (324)
T ss_pred c-cceeeeeeCCE----EEECCcccccccccCcccccCCCCCCeEEecCCC-CcEEEEEecCCC
Confidence 5 36789999993 3331 1 11112345566 999999887766
No 93
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.03 E-value=4e-08 Score=110.02 Aligned_cols=129 Identities=20% Similarity=0.248 Sum_probs=88.2
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHh---hCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCC
Q 002674 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA 271 (894)
Q Consensus 211 ~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~---Ll~--~~~~~vv~G~~~~~-----------lp~nv~v~g~~~ 271 (894)
...++.+++++++ .++++.|+.... ..+++. +.. ++++++++|.+... +.+|+.++|+.+
T Consensus 176 ~~~~~~~~~~~~~-~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~ 254 (360)
T cd04951 176 LKIRNALGVKNDT-FVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRD 254 (360)
T ss_pred HHHHHHcCcCCCC-EEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccc
Confidence 3466677775544 567777876542 123332 222 46888888865421 357899999988
Q ss_pred CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHH
Q 002674 272 YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll 347 (894)
+++++|+.||++|..+. .+++.|||++|+|+|+.+.+.. .+.++. .|..+...+ .+.+.+++.+++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~------~e~i~~--~g~~~~~~~--~~~~~~~i~~ll 324 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGV------REVVGD--SGLIVPISD--PEALANKIDEIL 324 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCCh------hhEecC--CceEeCCCC--HHHHHHHHHHHH
Confidence 89999999999998653 4789999999999998764332 333444 355555555 358899999998
Q ss_pred hcC
Q 002674 348 SLK 350 (894)
Q Consensus 348 ~~~ 350 (894)
++.
T Consensus 325 ~~~ 327 (360)
T cd04951 325 KMS 327 (360)
T ss_pred hCC
Confidence 544
No 94
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.03 E-value=2.5e-08 Score=110.85 Aligned_cols=121 Identities=18% Similarity=0.071 Sum_probs=86.2
Q ss_pred CCcEEEEEcCCCCCh--h-hhHHh---hCCCCcEEEEeCCCCCC--------CCCCeEECCCC--CCHHHHHhhcCEEEe
Q 002674 222 DVKLLILNFGGQPAG--W-KLKEE---YLPSGWKCLVCGASDSQ--------LPPNFIKLPKD--AYTPDFMAASDCMLG 285 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~--~-~l~~~---Ll~~~~~~vv~G~~~~~--------lp~nv~v~g~~--~~vp~ll~~~d~~I~ 285 (894)
+.+.++++.|+.... . .+++. +..++++++++|..... ...++++.|+. +.+.++|+.+|++|.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 268 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVV 268 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 445678888887653 1 23332 22247888888876532 24789999987 456789999999995
Q ss_pred cC-----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 286 KI-----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 286 ~~-----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
.+ ...++.|||++|+|+|+.+.+. +.+.+...+.|..+...+ .+.+.+++.++++++
T Consensus 269 ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~------~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~ 330 (359)
T cd03823 269 PSIWPENFPLVIREALAAGVPVIASDIGG------MAELVRDGVNGLLFPPGD--AEDLAAALERLIDDP 330 (359)
T ss_pred cCcccCCCChHHHHHHHCCCCEEECCCCC------HHHHhcCCCcEEEECCCC--HHHHHHHHHHHHhCh
Confidence 32 3357999999999999976432 345566666798888776 468999999998765
No 95
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.01 E-value=5.4e-08 Score=108.86 Aligned_cols=121 Identities=18% Similarity=0.116 Sum_probs=83.3
Q ss_pred CCcEEEEEcCCCCCh---hhhHH---hhCC-CCcEEEEeCCCCCC----------CCCCeEECCCCC--CHHHHHhhcCE
Q 002674 222 DVKLLILNFGGQPAG---WKLKE---EYLP-SGWKCLVCGASDSQ----------LPPNFIKLPKDA--YTPDFMAASDC 282 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~---~Ll~-~~~~~vv~G~~~~~----------lp~nv~v~g~~~--~vp~ll~~~d~ 282 (894)
..+.++++.|+.... ..+++ .+.. ++++++++|.+... ..+|+.++++.+ .+.++|..||+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di 297 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV 297 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe
Confidence 445678888887653 12333 2222 37788888865421 247899888763 56689999999
Q ss_pred EEecCC---------hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 283 MLGKIG---------YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 283 ~I~~~G---------~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+|.... .+++.||+++|+|+|+.+.+...+ .+...+.|..++..+. +.+.++|.+++.++
T Consensus 298 ~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~------~~~~~~~g~~~~~~~~--~~l~~~i~~~~~~~ 366 (394)
T cd03794 298 GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE------LVEEAGAGLVVPPGDP--EALAAAILELLDDP 366 (394)
T ss_pred eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh------hhccCCcceEeCCCCH--HHHHHHHHHHHhCh
Confidence 996432 234799999999999998654433 2444477888876654 68899999998666
No 96
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.01 E-value=7.6e-08 Score=106.74 Aligned_cols=292 Identities=15% Similarity=0.059 Sum_probs=154.3
Q ss_pred EEEecCCCC-cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHH
Q 002674 18 FAYYVTGHG-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (894)
Q Consensus 18 Il~~v~~~G-~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~ 96 (894)
|++.++..+ .|+...+..++++|.+.||+|.+++......+...+...++.+.......+ . ..+
T Consensus 2 i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~--------~---~~~---- 66 (365)
T cd03807 2 VLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPG--------R---PDP---- 66 (365)
T ss_pred eEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccc--------c---ccH----
Confidence 444555554 578888899999999999999998764322221111111222222111100 0 000
Q ss_pred HHhhcchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHH-hCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHH
Q 002674 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAAD-AGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (894)
Q Consensus 97 ~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~-lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~ 172 (894)
.......+++++.+||+|+.+. .+.+..++.. .++|.+...+..+.... ..... ....+...
T Consensus 67 --------~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~---~~~~~~~~-- 132 (365)
T cd03807 67 --------GALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG-KKSTR---LVARLRRL-- 132 (365)
T ss_pred --------HHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-chhHh---HHHHHHHH--
Confidence 0112345667888999999864 3344445555 46777654322111100 00000 00000000
Q ss_pred hhccccceeeecCCC-------CCCCC-CCceeecCcccc---cCccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hh
Q 002674 173 EDYSHCEFLIRLPGY-------CPMPA-FRDVIDVPLVVR---RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WK 238 (894)
Q Consensus 173 ~~y~~~~~ll~~p~~-------~~~p~-~~~v~~vp~~~~---~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~ 238 (894)
.....+..+..+.. ...+. ...+.+.|.... .....+...++.++++++ +.+++++|+.... ..
T Consensus 133 -~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~K~~~~ 210 (365)
T cd03807 133 -LSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPED-TFLIGIVARLHPQKDHAT 210 (365)
T ss_pred -hccccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCC-CeEEEEecccchhcCHHH
Confidence 00111111110000 00010 011222232211 111223345567777544 4567888887652 12
Q ss_pred hHHh---hC--CCCcEEEEeCCCCCC------------CCCCeEECCCCCCHHHHHhhcCEEEecCC----hhHHHHHHH
Q 002674 239 LKEE---YL--PSGWKCLVCGASDSQ------------LPPNFIKLPKDAYTPDFMAASDCMLGKIG----YGTVSEALA 297 (894)
Q Consensus 239 l~~~---Ll--~~~~~~vv~G~~~~~------------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G----~~t~~Eal~ 297 (894)
+++. +. .++++++++|..... +..++.+.++.+.++++|+.||++|..+. .+++.||++
T Consensus 211 li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a 290 (365)
T cd03807 211 LLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMA 290 (365)
T ss_pred HHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCccccCCcHHHHHHh
Confidence 3332 22 256788888865421 34678888887888999999999997643 378999999
Q ss_pred cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 298 YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 298 ~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+|+|+|+.+.+.. .+.+.+ .|..+...+ .+.+.+++.++++++
T Consensus 291 ~g~PvI~~~~~~~------~e~~~~--~g~~~~~~~--~~~l~~~i~~l~~~~ 333 (365)
T cd03807 291 CGLPVVATDVGDN------AELVGD--TGFLVPPGD--PEALAEAIEALLADP 333 (365)
T ss_pred cCCCEEEcCCCCh------HHHhhc--CCEEeCCCC--HHHHHHHHHHHHhCh
Confidence 9999998764432 333444 566676655 468899999998775
No 97
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.01 E-value=6.7e-09 Score=112.98 Aligned_cols=164 Identities=16% Similarity=0.198 Sum_probs=110.2
Q ss_pred EEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCC
Q 002674 499 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (894)
Q Consensus 499 ~~~APGRv~Li----GEH~D-y~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (894)
.++||++|||+ |-..| |+.--.+-++|+++-.+.+.+.+++ + .+... .
T Consensus 4 ~~~a~aKiNl~L~i~~~~~dgyH~l~sl~~al~l~d~v~i~~~~~~-~---------------------~i~~~-----~ 56 (276)
T PRK14612 4 ERLAPAKVNLGLSVLGRREDGYHELHTLMVPLDVGDRLEVEPIASG-L---------------------ELRVL-----G 56 (276)
T ss_pred EEeeCcEEeeccccCCCCCCCCceeEEEEEECCCCCEEEEEECCCc-E---------------------EEEcC-----C
Confidence 46899999985 55555 7777788888998888888764321 1 11100 0
Q ss_pred CCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHH
Q 002674 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 653 (894)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~ 653 (894)
..++. ...|.+.-++..+.+..|.. .|++|.|.++||+|+|||||||..
T Consensus 57 ----~~~p~-------------------------~~~Nli~ka~~~~~~~~g~~--~~~~I~i~k~IP~~~GLGssSa~a 105 (276)
T PRK14612 57 ----ADLPT-------------------------DERNLVYRAARAYLDAAGQP--GGVRITLEKRLPLAAGLGGGSSDA 105 (276)
T ss_pred ----CCCCC-------------------------CCcccHHHHHHHHHHHhCCC--CCeEEEEEecCCCcCCCchHHHHH
Confidence 00010 12345555556666777753 599999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCC
Q 002674 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (894)
Q Consensus 654 va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sg 733 (894)
+|++.+++++++.+++.. +++... | .|...+.+||. .+..-+.... ++++. +++.++|+.++
T Consensus 106 aa~l~al~~l~~~~l~l~---~ia~~~---------g-~dv~~~~~GG~---~~~~g~g~~~-~~l~~-~~~~~vv~~P~ 167 (276)
T PRK14612 106 AATLLALAQLYPAPVDLP---ALALTL---------G-ADVPFFLLGGA---AEARGVGERL-TPLEL-PPVPLVLVNPG 167 (276)
T ss_pred HHHHHHHHHHhCCChHHH---HHHHHh---------C-CCcCeeeeCCe---EEEEecCccc-eEcCC-CCcEEEEECCC
Confidence 999999999999877644 444432 2 27778888884 2222222222 45543 47889999999
Q ss_pred CCccc
Q 002674 734 IRHSV 738 (894)
Q Consensus 734 v~~~~ 738 (894)
+..+|
T Consensus 168 ~~~sT 172 (276)
T PRK14612 168 VAVSA 172 (276)
T ss_pred CCCCH
Confidence 88765
No 98
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.00 E-value=1e-07 Score=106.60 Aligned_cols=277 Identities=17% Similarity=0.102 Sum_probs=149.7
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHHh
Q 002674 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (894)
Q Consensus 27 ~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~l 106 (894)
.|--..+..++++|.++||+|++++..... ...+...++.+...... .... +..+. .
T Consensus 10 gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~---~~~~~---------~ 66 (355)
T cd03819 10 GGVERGTLELARALVERGHRSLVASAGGRL--VAELEAEGSRHIKLPFI---------SKNP---LRILL---------N 66 (355)
T ss_pred CcHHHHHHHHHHHHHHcCCEEEEEcCCCch--HHHHHhcCCeEEEcccc---------ccch---hhhHH---------H
Confidence 466777889999999999999999864321 11111112222211000 0000 00000 1
Q ss_pred HHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchh-H-HHHHHHhhhcc---chHHHHHHHHhhcccc
Q 002674 107 LKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWD-F-IYAEYVMAAGH---HHRSIVWQIAEDYSHC 178 (894)
Q Consensus 107 l~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~-~-~~~~~~~~~~~---~~~~i~~~l~~~y~~~ 178 (894)
.....+++++.+||+|+.+. .+.+.++++..++|++..-+-.+. . .+......... ......+.+...+.
T Consensus 67 ~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~~~-- 144 (355)
T cd03819 67 VARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIRENYG-- 144 (355)
T ss_pred HHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHHhcC--
Confidence 12335567889999999875 234455667789999865332211 1 11110000000 00011111111110
Q ss_pred ceeeecCCCCCCC-CCCceeecCccccc--C-ccChH---HHHHHhCCCCCCcEEEEEcCCCCCh---hhhHH---hhCC
Q 002674 179 EFLIRLPGYCPMP-AFRDVIDVPLVVRR--L-HKSRK---EVRKELGIEDDVKLLILNFGGQPAG---WKLKE---EYLP 245 (894)
Q Consensus 179 ~~ll~~p~~~~~p-~~~~v~~vp~~~~~--~-~~~~~---e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~---~Ll~ 245 (894)
.+ ....+++.|+.... + ...+. .+++.++.+++ ..++++.|+.... ..+.+ .+..
T Consensus 145 -----------~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~Gr~~~~Kg~~~li~~~~~l~~ 212 (355)
T cd03819 145 -----------VDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKG-KPVILLPGRLTRWKGQEVFIEALARLKK 212 (355)
T ss_pred -----------CChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCC-ceEEEEeeccccccCHHHHHHHHHHHHh
Confidence 01 01112233322111 1 11111 24556665444 4567788876542 12333 2322
Q ss_pred --CCcEEEEeCCCCCC---------------CCCCeEECCCCCCHHHHHhhcCEEEecC-----ChhHHHHHHHcCCcEE
Q 002674 246 --SGWKCLVCGASDSQ---------------LPPNFIKLPKDAYTPDFMAASDCMLGKI-----GYGTVSEALAYKLPFV 303 (894)
Q Consensus 246 --~~~~~vv~G~~~~~---------------lp~nv~v~g~~~~vp~ll~~~d~~I~~~-----G~~t~~Eal~~G~P~l 303 (894)
++++++++|..... +.++|+++|+.+.++++|+.+|++|..+ ..++++|||++|+|+|
T Consensus 213 ~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI 292 (355)
T cd03819 213 DDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVI 292 (355)
T ss_pred cCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEE
Confidence 56888888865321 3468999999888999999999999765 2368999999999999
Q ss_pred EEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHh
Q 002674 304 FVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (894)
Q Consensus 304 ~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~ 348 (894)
+....+. .+.+...+.|..+..++. +.+.++|.+++.
T Consensus 293 ~~~~~~~------~e~i~~~~~g~~~~~~~~--~~l~~~i~~~~~ 329 (355)
T cd03819 293 ASDHGGA------RETVRPGETGLLVPPGDA--EALAQALDQILS 329 (355)
T ss_pred EcCCCCc------HHHHhCCCceEEeCCCCH--HHHHHHHHHHHh
Confidence 8764332 334555567888876664 578888876654
No 99
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.99 E-value=1.1e-07 Score=114.82 Aligned_cols=122 Identities=9% Similarity=0.004 Sum_probs=87.4
Q ss_pred CcEEEEEcCCCCCh---hhhHHhh---C--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEE
Q 002674 223 VKLLILNFGGQPAG---WKLKEEY---L--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~---~~l~~~L---l--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~~ 283 (894)
...++++.|..... ..+++++ . .++++++++|.+... +.++|++.|+.++++.+|+.+|+|
T Consensus 516 ~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~ 595 (694)
T PRK15179 516 ARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAF 595 (694)
T ss_pred CCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEE
Confidence 34567778876542 2234432 1 257889889875421 457899999999999999999999
Q ss_pred EecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 284 LGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 284 I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
|..+ | .+++.|||++|+|+|+....+ +.+.+.+...|+.++..+..+..|.++|.+++.+.
T Consensus 596 VlpS~~Egfp~vlLEAMA~G~PVVat~~gG------~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSGVPVVTTLAGG------AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred EeccccccchHHHHHHHHcCCeEEEECCCC------hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 9743 3 368999999999999987543 23445555679999877766667888888877543
No 100
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.98 E-value=2.1e-07 Score=107.26 Aligned_cols=131 Identities=19% Similarity=0.228 Sum_probs=88.0
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHh---hC-CCCcEEEEeCCCCCC---------C-CCCeEECCCCC--
Q 002674 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL-PSGWKCLVCGASDSQ---------L-PPNFIKLPKDA-- 271 (894)
Q Consensus 211 ~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~---Ll-~~~~~~vv~G~~~~~---------l-p~nv~v~g~~~-- 271 (894)
..+++.++++++ +.++++.|+.+.. ..++++ +. .++++++++|.+... + .+||+++|+.+
T Consensus 217 ~~~~~~~~~~~~-~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~ 295 (412)
T PRK10307 217 DALRAQLGLPDG-KKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYD 295 (412)
T ss_pred HHHHHHcCCCCC-CEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHH
Confidence 457777887544 4577788887663 223343 22 246788888876421 1 24799998864
Q ss_pred CHHHHHhhcCEEEecC---C-----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHH
Q 002674 272 YTPDFMAASDCMLGKI---G-----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~---G-----~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l 343 (894)
.++++|+.||++|... + .+.+.|+|++|+|+|+.+.++. + ..+.+. +.|+.++..+. +.+.++|
T Consensus 296 ~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~-~---~~~~i~--~~G~~~~~~d~--~~la~~i 367 (412)
T PRK10307 296 RLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT-E---LGQLVE--GIGVCVEPESV--EALVAAI 367 (412)
T ss_pred HHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc-h---HHHHHh--CCcEEeCCCCH--HHHHHHH
Confidence 5678999999987531 2 1347899999999999875431 1 122233 67888887664 5899999
Q ss_pred HHHHhcC
Q 002674 344 ERAISLK 350 (894)
Q Consensus 344 ~~ll~~~ 350 (894)
.++++++
T Consensus 368 ~~l~~~~ 374 (412)
T PRK10307 368 AALARQA 374 (412)
T ss_pred HHHHhCH
Confidence 9998765
No 101
>PRK01212 homoserine kinase; Provisional
Probab=98.97 E-value=6.3e-09 Score=114.80 Aligned_cols=114 Identities=20% Similarity=0.250 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (894)
|.+.-++..+.+..|.. .|++|.|.++||.|+|||||||..+|++.|++.++|.+++.++|+++|.+.|.+
T Consensus 63 Nli~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSa~aaA~l~al~~l~~~~l~~~eL~~~a~~~e~~------- 133 (301)
T PRK01212 63 NLVYQAALKFLEKLGKP--PGLRIELEKNIPLGRGLGSSAASIVAGLVAANELAGLPLSKEELLQLATEGEGH------- 133 (301)
T ss_pred ccHHHHHHHHHHHcCCC--CCeEEEEEeCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-------
Confidence 45555566666666754 589999999999999999999999999999999999999999999999999863
Q ss_pred hhhhH-HhhcCCCCeEEEE-EecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 691 VMDQM-ASACGEANKLLAM-VCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 691 ~mDq~-as~~G~~~~~~~~-~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
.|+. .+++||. .+. +..+... ++++.|+++.+++++++..-+|
T Consensus 134 -~ddv~~~l~GG~---~~~~~g~g~~~-~~~~~~~~~~~vlv~p~~~~sT 178 (301)
T PRK01212 134 -PDNVAPALLGGL---VLALEENGVIS-VKIPVFDDLKWVVAIPNIELST 178 (301)
T ss_pred -HHHHHHHHhCCE---EEEEECCceEE-EEecCCCCeEEEEEECCCcCCH
Confidence 2444 6789984 333 2333223 6777777889999998876554
No 102
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.96 E-value=1.5e-08 Score=111.21 Aligned_cols=171 Identities=16% Similarity=0.199 Sum_probs=114.3
Q ss_pred eEEEEcCcccccc----ccccc-cCCCeeeccccc-cceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccc
Q 002674 497 IFVARAPGRLDVM----GGIAD-YSGSLVLQMPIR-EACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSE 570 (894)
Q Consensus 497 ~~~~~APGRv~Li----GEH~D-y~gg~vl~~AI~-~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~ 570 (894)
...+.||+||||+ |-.-| |+.--.+-.+|+ .+-.+.+++.++.. +.+...
T Consensus 6 ~~~~~apaKINL~L~v~~kr~DGyH~l~sl~~~i~~~~D~l~i~~~~~~~---------------------i~~~~~--- 61 (296)
T PRK14615 6 AVTLRSGCKVNLDLRITGVRPDGYHEIDSLFLPLPEPHDELHVRVTDAPG---------------------ITVTCT--- 61 (296)
T ss_pred eEEEEecceEEeccccCCcCCCCCcceEEEEEECCCCCcEEEEEECCCCC---------------------EEEEEC---
Confidence 3567999999986 55555 777777777887 47677776654321 222110
Q ss_pred cCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHH
Q 002674 571 LSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (894)
Q Consensus 571 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSA 650 (894)
..++ +. . .|.+.-++..+.+..+.. .|++|.|.++||.++||||||
T Consensus 62 --------~~~~---------------------~~--~-~Nlv~~a~~~~~~~~~~~--~~~~i~i~k~IP~~~GLGsgs 107 (296)
T PRK14615 62 --------IPDL---------------------DP--E-RNTVTRAYTAFAAATGFR--PPLEVHLRKGIPHGAGLGGGS 107 (296)
T ss_pred --------CCCC---------------------CC--C-ccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCCCCccHHH
Confidence 0000 00 0 355555556666666654 589999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEecCCceeEEeec-CCCeEEEE
Q 002674 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWG 729 (894)
Q Consensus 651 Al~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~-p~~~~~vv 729 (894)
|..+|++.+++++++.+++.+++++++.+.|.. +| ...+||. ++ ..- ..+..+++++ ++++.+++
T Consensus 108 a~aaa~l~al~~l~~~~l~~~~l~~~a~~~gaD---vP-------ffl~gg~--a~-~~G-~Ge~~~~l~~~~~~~~~vl 173 (296)
T PRK14615 108 ADAAALLRHLNSIAPHPLSPEALAKLAAGVGAD---VP-------FFLHNVP--CR-ATG-IGEILTPVALGLSGWTLVL 173 (296)
T ss_pred HHHHHHHHHHHHHcCCCcCHHHHHHHHHHhCCC---Ce-------eeccCCC--EE-EEe-eEeEEEECCCCCCCcEEEE
Confidence 999999999999999999999999999987642 33 2333432 21 111 1112245544 35677899
Q ss_pred EeCCCCcccC
Q 002674 730 IDSGIRHSVG 739 (894)
Q Consensus 730 ~~sgv~~~~~ 739 (894)
+++++.-+|.
T Consensus 174 ~~P~~~vsT~ 183 (296)
T PRK14615 174 VCPEVQVSTP 183 (296)
T ss_pred ECCCCCcChH
Confidence 9998887764
No 103
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=98.96 E-value=2.6e-08 Score=103.16 Aligned_cols=176 Identities=20% Similarity=0.269 Sum_probs=124.9
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 002674 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (894)
Q Consensus 499 ~~~APGRv~LiGEH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (894)
.++|+|=+.++--.++-.|+. ++|++.+.+.++..++.+++ .+.
T Consensus 4 ~a~A~g~~TIiNAiatG~G~A---fgidL~v~a~v~~~~~~~~~-----------------------------~~~---- 47 (278)
T COG1685 4 RARAYGGGTIINAIATGKGSA---FGIDLKVEAEVRLSDEGKVR-----------------------------GEP---- 47 (278)
T ss_pred eEEecCceeEeeehhcCccce---eeecceEEEEEEEcCccccc-----------------------------cCC----
Confidence 468888888888888887765 88999988888776532210 000
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCChhHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHH
Q 002674 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (894)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~W~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~ 658 (894)
..| ...+.-++..+.++.|.. .|+.+.++|+||.|+||.||+|++.|++.
T Consensus 48 ~~d----------------------------~~li~~~~~~v~e~~g~~--~~~~v~v~SeiP~~~GLkSSSA~~nAlv~ 97 (278)
T COG1685 48 EGD----------------------------TRLIERCVERVREKYGIP--LGVEVEVESEIPVGSGLKSSSAASNALVK 97 (278)
T ss_pred CCC----------------------------hHHHHHHHHHHHHHcCCC--cceEEEEecCCCcccCcchhHHHHHHHHH
Confidence 000 233344556667777875 48999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhhcCCC-CChhh-hHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCc
Q 002674 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAP-CGVMD-QMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRH 736 (894)
Q Consensus 659 al~~l~~~~l~~~~la~~a~~~E~~~~G~~-~G~mD-q~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~ 736 (894)
|+..+.|..+++.+++.++.++-+.. |.. .|-.| ..+|.+|| ..+.|.+.+++...... ++...+|.-.+.++
T Consensus 98 A~~~~~g~~~~~~~i~~l~a~~S~~a-GvSvTGA~DDa~AS~~GG---~~iTDN~~m~Ilrr~~~-~~~~vlI~~p~~k~ 172 (278)
T COG1685 98 AVLKALGEEIDDFEILRLGARASKEA-GVSVTGAFDDACASYLGG---IVITDNRKMRILRRLDL-PELTVLILAPGEKR 172 (278)
T ss_pred HHHHHcCCCCChhHHHHHHHHHHHhc-CceEeccchHHHHHHhCC---eEEecchhheehhcccc-CCceEEEEecCCcc
Confidence 99999999999999999999888764 543 45555 45899999 34555555443222233 35666666667666
Q ss_pred ccCCCCchh
Q 002674 737 SVGGADYGS 745 (894)
Q Consensus 737 ~~~~~~y~~ 745 (894)
.+...+.+.
T Consensus 173 ~~~~vdv~~ 181 (278)
T COG1685 173 LSANVDVNR 181 (278)
T ss_pred ccccCCHHH
Confidence 666566654
No 104
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.95 E-value=6.4e-07 Score=99.22 Aligned_cols=308 Identities=17% Similarity=0.152 Sum_probs=163.1
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHH
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~ 95 (894)
|+|.+-+..+ -|+.....++++|.++||+|.+.+..... ....++.-++.+..++-. | ... ..++
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~GheV~it~R~~~~-~~~LL~~yg~~y~~iG~~-g--------~~~---~~Kl 65 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKRGHEVLITARDKDE-TEELLDLYGIDYIVIGKH-G--------DSL---YGKL 65 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhCCCEEEEEEeccch-HHHHHHHcCCCeEEEcCC-C--------CCH---HHHH
Confidence 4665555544 49999999999999999999998864321 112222123334333211 1 011 1112
Q ss_pred HHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhc
Q 002674 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDY 175 (894)
Q Consensus 96 ~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y 175 (894)
.... ....++.+++++++||++|+..++.+..+|..+|+|+|.+.+.-+..... ++ .+
T Consensus 66 ~~~~-----~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP~I~f~D~e~a~~~~---------------~L--t~ 123 (335)
T PF04007_consen 66 LESI-----ERQYKLLKLIKKFKPDVAISFGSPEAARVAFGLGIPSIVFNDTEHAIAQN---------------RL--TL 123 (335)
T ss_pred HHHH-----HHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCCeEEEecCchhhccc---------------ee--eh
Confidence 2111 12245577888999999999999999999999999999986643211000 00 00
Q ss_pred cccceeeecCCCCCC---CCC---CceeecCcccc----cCccChHHHHHHhCCCCCCcEEEEEcCCCCCh-----h---
Q 002674 176 SHCEFLIRLPGYCPM---PAF---RDVIDVPLVVR----RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG-----W--- 237 (894)
Q Consensus 176 ~~~~~ll~~p~~~~~---p~~---~~v~~vp~~~~----~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-----~--- 237 (894)
..++.++ .|...+. ..+ .++...+.... .+-...++..+.+|++ +.++|++=+....+. .
T Consensus 124 Pla~~i~-~P~~~~~~~~~~~G~~~~i~~y~G~~E~ayl~~F~Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~ 201 (335)
T PF04007_consen 124 PLADVII-TPEAIPKEFLKRFGAKNQIRTYNGYKELAYLHPFKPDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSIL 201 (335)
T ss_pred hcCCeeE-CCcccCHHHHHhcCCcCCEEEECCeeeEEeecCCCCChhHHHHcCCC-CCCEEEEEeccccCeeecCccchH
Confidence 1112211 1111000 000 11221222110 1122335677889975 568888877665441 1
Q ss_pred -hhHHhhCCCCcEEEEeCCCCCC--CCC--CeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCc
Q 002674 238 -KLKEEYLPSGWKCLVCGASDSQ--LPP--NFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNE 312 (894)
Q Consensus 238 -~l~~~Ll~~~~~~vv~G~~~~~--lp~--nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~e 312 (894)
++.+.|...+..+|+......+ +.+ ++.+.+..-...++|..||++|+-|| ++..||+..|+|+|.+- + ++
T Consensus 202 ~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~-~--g~ 277 (335)
T PF04007_consen 202 PEIIEELEKYGRNVVIIPRYEDQRELFEKYGVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCF-P--GK 277 (335)
T ss_pred HHHHHHHHhhCceEEEecCCcchhhHHhccCccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEec-C--Cc
Confidence 2333443333323333222211 211 24333322233489999999999555 88999999999999863 1 22
Q ss_pred hHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCcc--CCCCHHHHHHHHHHHH
Q 002674 313 EPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--GGINGGEVAAHILQET 370 (894)
Q Consensus 313 q~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~--~~~~g~~~~A~~i~~~ 370 (894)
....=++|.+.|. .....+. +++.+.+.+.+..+.... ...+-.+.+.+.|+++
T Consensus 278 ~~~vd~~L~~~Gl--l~~~~~~--~ei~~~v~~~~~~~~~~~~~~~~d~~~~i~~~i~~~ 333 (335)
T PF04007_consen 278 LLAVDKYLIEKGL--LYHSTDP--DEIVEYVRKNLGKRKKIREKKSEDPTDLIIEEIEEY 333 (335)
T ss_pred chhHHHHHHHCCC--eEecCCH--HHHHHHHHHhhhcccchhhhhccCHHHHHHHHHHHh
Confidence 2123367888876 3433343 455556666554442221 1244455555555554
No 105
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.4e-12 Score=144.02 Aligned_cols=423 Identities=35% Similarity=0.404 Sum_probs=261.8
Q ss_pred CCcEEEECCchhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceeeecCCCCCCCCCCcee
Q 002674 118 KADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVI 197 (894)
Q Consensus 118 ~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~~~ll~~p~~~~~p~~~~v~ 197 (894)
...-+..|..+..+.++..-++|.+.++|+.|.+.+..|.. ..+.+++...+.+...++ .++++.+.++.
T Consensus 61 sVlpmaid~~~l~~~~~~~d~~~sl~~tN~~~~f~~~~~~~------p~~~~~I~~~~~~w~ny~----~C~~~g~h~~~ 130 (489)
T KOG0631|consen 61 SVLPMAIDVDTLIAVAPSDDGIVSLRLTNFNPDFIYFKYPL------PSIVWQIDPDVSKWENYF----YCGMKGFHEYI 130 (489)
T ss_pred eeeeEEeeeeeEEEEEEcCCCceeEEEecCCCccceeeccC------CchhcccCCCccchhhhh----ccchHHHHHHH
Confidence 33333344433333445566899999999998866554422 113344544444333222 22233332221
Q ss_pred ecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCChhhhHHhhCCCCcEEEEeCCCCCC-CCCCeEECCCCCCHHHH
Q 002674 198 DVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQ-LPPNFIKLPKDAYTPDF 276 (894)
Q Consensus 198 ~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~~l~~~Ll~~~~~~vv~G~~~~~-lp~nv~v~g~~~~vp~l 276 (894)
.+.+.+... ...+.++.+|++..++.+... ..|.+..+|..... +++|+...+.....++.
T Consensus 131 -----------~~~~~~~~~----~vGl~~l~~g~vPtgsgLsSs---aa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~ 192 (489)
T KOG0631|consen 131 -----------KRKPVRFEP----PVGLSILNDGSVPTGSGLSSS---AAWLCAAALATLKLNLGPNFIISKKDLATITV 192 (489)
T ss_pred -----------hccccccCC----CcceEEEecCCCCCCCCcchh---HHHHHHHHHHHHHHhcCCCcccchhhhhcceE
Confidence 000111111 134678888888776443321 12222222222111 35565444322233456
Q ss_pred HhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCccCC
Q 002674 277 MAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGG 356 (894)
Q Consensus 277 l~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~ 356 (894)
.++.++.+..+|+.+..|+++...+.+.+. + . +.+..+..++....|+.+-..++....+.....+-.+.+ .+.+.
T Consensus 193 ~ae~~~G~~~gGmdq~asvl~~~~~Al~v~-~-~-~~Pf~~~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlR-v~E~~ 268 (489)
T KOG0631|consen 193 VAESYIGLNSGGMDQAASVLAEKGHALLVD-P-Y-FTPFRRSMLKLPDGGVFVIANSLVESNKAETAETNYNLR-VVEGT 268 (489)
T ss_pred EeecccCcCCCcHHHHHHHHHhcCceEEec-c-c-CCccccccccCCCCceEEEechhhhhcchhhhhhhhhce-eEeee
Confidence 677888889999999999999999999997 2 2 446777889999999988888887666665665555444 44445
Q ss_pred CCHHHHHHHHHHHHHccCcccCCCCchhhhhHHHHHhccccccCCCcccCccccccccccccccccCCCCCCCCCCCCcc
Q 002674 357 INGGEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTV 436 (894)
Q Consensus 357 ~~g~~~~A~~i~~~l~~~~~~~~~~~ga~~L~~a~~~~~~~q~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (894)
..+..-++.+..+.. |+.++|+.|.. .++ .+|.||+-.++++++ + +..++++
T Consensus 269 ia~~~la~k~~~~~~------------------~~~~~~~~~~~-~~~-~i~~~~~~~~~~l~~---v---~~~~~~e-- 320 (489)
T KOG0631|consen 269 IAAGELAAKILVELP------------------AYILRYQLQRA-WRG-DIGEGYERAEEMLGL---V---EESLKPE-- 320 (489)
T ss_pred hhhHHHHHHhhcccH------------------HHHHhhhhhhc-ccc-ccchhHHHHHHHHHH---H---HhhcCcC--
Confidence 555554445544431 67788999998 888 999999999998872 2 3333333
Q ss_pred ccccccceeccCCCCCCchHHHHHHHHhhccccccCCCCchHHHHHHHHHHhccCCCCCceEEEEcCccccccccccccC
Q 002674 437 KLSTEDFEILHGDCQGLPDTMSFLKSLVELDIIKDSDRTPEKRQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYS 516 (894)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~APGRv~LiGEH~Dy~ 516 (894)
+|++++.|-+.+.|+..|++++..+....... ..-.+++++......+.++.+..+.++|+|.. |.-.||.
T Consensus 321 -----~f~~ee~~~~l~~~~~~f~~~~~T~~~v~~~~--~k~~~rakHv~sea~rv~q~~~~~~~a~~~~d--~~~~~~g 391 (489)
T KOG0631|consen 321 -----GFNIEEVARALGLDTEEFLQSLLTLAAVDLQV--KKLYQRAKHVYSEALRVLQEEKLCARAPGRAD--GFLADFG 391 (489)
T ss_pred -----CCCHHHHHHHhccchHHHHHHhccccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCccchh--hhHHHHH
Confidence 89999999999999999999999887765443 11123345555667787888888999999998 7777776
Q ss_pred CCeeeccccccceEEEEEecCCchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCceeccCCccc-cCCCCcchh
Q 002674 517 GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMDLSDFM-DEGKPMSYE 595 (894)
Q Consensus 517 gg~vl~~AI~~~~~v~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 595 (894)
+|-+.....|.+....+-+....|+++.+++... -+.+...+.+....+..+ .|..+.. ...++..|+
T Consensus 392 ---~LmneS~~Sc~~~yEcscpel~qL~kiala~g~~-----gaRlTGaGwGGc~v~lvp---~d~~~~~~~~~~~~~Y~ 460 (489)
T KOG0631|consen 392 ---RLMNESHRSCDVLYECSCPELDQLCKIALANGGV-----GARLTGAGWGGCTVALVP---ADLVDFAVAALKEIYYE 460 (489)
T ss_pred ---HHhhhhhHHHHHHHhcCCHhHHHHHHHHHhcCCc-----cceeeccccccceeeecc---ccchHHHHHhhhhhhhc
Confidence 7878888889999998888888999887655322 244544433211111111 1111111 122456777
Q ss_pred hhhcccCCCCCCChhHHHHHHHHHH
Q 002674 596 KAKKYFDTNPSQKWAAYVAGTILVL 620 (894)
Q Consensus 596 ~~~~~~~~~~~~~W~~yv~g~i~~~ 620 (894)
|+..++.+++...|.-|.++.+-.+
T Consensus 461 ka~~~~~~~~~k~~~~~skp~~g~~ 485 (489)
T KOG0631|consen 461 KAYPKFAQDELKKALIVSKPAAGVL 485 (489)
T ss_pred cccchhhhchhhceEEEecCchhhh
Confidence 7777777666667777776665443
No 106
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.92 E-value=2.4e-07 Score=105.04 Aligned_cols=316 Identities=15% Similarity=0.053 Sum_probs=157.3
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHC-CCeEEEEeCCCCcccccccCCCceeEee-eccCCCcccccccccCHHHHHHH
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDFVFTSEIQSPRLFIRK-VLLDCGAVQADALTVDRLASLEK 94 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~-Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~-~~~d~g~~~~~~~~~d~~~~l~~ 94 (894)
+|++++ ...-|...+..+.++|.++ +.++.++..+........+.. .+.+.+ +....+. ........
T Consensus 2 ~i~~~~--gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~-~~~i~~~~~~~~~~-----~~~~~~~~--- 70 (365)
T TIGR00236 2 KVSIVL--GTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLD-LFHLPPDYDLNIMS-----PGQTLGEI--- 70 (365)
T ss_pred eEEEEE--ecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHH-hcCCCCCeeeecCC-----CCCCHHHH---
Confidence 565443 2467889999999999986 566665554433211111100 001100 0000110 00111111
Q ss_pred HHHHhhcchHHhHHHHHHHHhcCCCcEEEECCc----hhHHHHHHHhCCcEEEEecCchh--HHHHHHHhhhccchHHHH
Q 002674 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTNFSWD--FIYAEYVMAAGHHHRSIV 168 (894)
Q Consensus 95 ~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~----~~a~~aA~~lgIP~V~isn~~~~--~~~~~~~~~~~~~~~~i~ 168 (894)
....+....+++++++||+|++..+ .++.++|+.+|||++.+. .+.. ..+.. ++. .....+.
T Consensus 71 --------~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~-~g~~s~~~~~~-~~~--~~~r~~~ 138 (365)
T TIGR00236 71 --------TSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVE-AGLRTGDRYSP-MPE--EINRQLT 138 (365)
T ss_pred --------HHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEe-CCCCcCCCCCC-Ccc--HHHHHHH
Confidence 1112345567889999999998642 457788899999998652 1100 00000 000 0000001
Q ss_pred HHHHhhc-cc----cceeeecCCCCCCCCCCceeecCcccc---cC-ccChHHHHHHhCCCCCCcEEEEEcCCCCC---h
Q 002674 169 WQIAEDY-SH----CEFLIRLPGYCPMPAFRDVIDVPLVVR---RL-HKSRKEVRKELGIEDDVKLLILNFGGQPA---G 236 (894)
Q Consensus 169 ~~l~~~y-~~----~~~ll~~p~~~~~p~~~~v~~vp~~~~---~~-~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~---~ 236 (894)
.++...+ .. .+.+... + .-+....+++.|.... .. ...+.++++.++ .++++++++++.... +
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~~-G--~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~--~~~~~vl~~~hr~~~~~k~ 213 (365)
T TIGR00236 139 GHIADLHFAPTEQAKDNLLRE-N--VKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG--EDKRYILLTLHRRENVGEP 213 (365)
T ss_pred HHHHHhccCCCHHHHHHHHHc-C--CCcccEEEeCChHHHHHHHHHhhccchhHHHhcC--CCCCEEEEecCchhhhhhH
Confidence 1111100 00 0001000 0 0011123344443221 11 111234556665 244677776653321 1
Q ss_pred -hhhHHh---hC--CCCcEEEEeC-CCCC---------CCCCCeEECCCCCCH--HHHHhhcCEEEecCChhHHHHHHHc
Q 002674 237 -WKLKEE---YL--PSGWKCLVCG-ASDS---------QLPPNFIKLPKDAYT--PDFMAASDCMLGKIGYGTVSEALAY 298 (894)
Q Consensus 237 -~~l~~~---Ll--~~~~~~vv~G-~~~~---------~lp~nv~v~g~~~~v--p~ll~~~d~~I~~~G~~t~~Eal~~ 298 (894)
..++++ +. .+++.+++++ ++.. ...+++++++...+. ..+|+.+|++|+.+| +.+.||+++
T Consensus 214 ~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg-~~~~EA~a~ 292 (365)
T TIGR00236 214 LENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDSG-GVQEEAPSL 292 (365)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECCh-hHHHHHHHc
Confidence 123332 22 2456666653 3221 024688888766543 478899999999887 457999999
Q ss_pred CCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCc---------cCCCCHHHHHHHHHHH
Q 002674 299 KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY---------EGGINGGEVAAHILQE 369 (894)
Q Consensus 299 G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~---------~~~~~g~~~~A~~i~~ 369 (894)
|+|+|.++.. .+++ .+...|.++.+. . .++.+.+++.++++++..+ -.+++.++++++.|.+
T Consensus 293 g~PvI~~~~~--~~~~----e~~~~g~~~lv~-~--d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 293 GKPVLVLRDT--TERP----ETVEAGTNKLVG-T--DKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCCEEECCCC--CCCh----HHHhcCceEEeC-C--CHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 9999998632 2222 134467777664 2 3568888999988765311 1345666777766665
Q ss_pred H
Q 002674 370 T 370 (894)
Q Consensus 370 ~ 370 (894)
+
T Consensus 364 ~ 364 (365)
T TIGR00236 364 H 364 (365)
T ss_pred h
Confidence 4
No 107
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.91 E-value=2.2e-07 Score=106.76 Aligned_cols=300 Identities=16% Similarity=0.103 Sum_probs=154.2
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCccccccc-CCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHH
Q 002674 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEI-QSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (894)
Q Consensus 27 ~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i-~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 105 (894)
.|.......++++|.++||+|++++........... ...++.+..+. .+... ..........+..+. ..
T Consensus 20 GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~----~~~~~~~~~~~~~~~----~~ 89 (405)
T TIGR03449 20 GGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVV--AGPYE----GLDKEDLPTQLCAFT----GG 89 (405)
T ss_pred CCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEec--CCCcc----cCCHHHHHHHHHHHH----HH
Confidence 577899999999999999999999865321110100 01223332211 01000 000100010011110 01
Q ss_pred hHHHHHHHHh--cCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHH--Hhhcccc
Q 002674 106 ILKDEVEWLN--SIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI--AEDYSHC 178 (894)
Q Consensus 106 ll~~~~~~L~--~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l--~~~y~~~ 178 (894)
. ...+++ ..+||+|+++. .+.+..+++..++|.|...+-.+ .....+...... .......+ ...+..+
T Consensus 90 ~---~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~-~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~ 164 (405)
T TIGR03449 90 V---LRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLA-AVKNAALADGDT-PEPEARRIGEQQLVDNA 164 (405)
T ss_pred H---HHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchH-HHHHHhccCCCC-CchHHHHHHHHHHHHhc
Confidence 1 123333 35899999875 23455566778999876432111 111111100000 00000111 1122233
Q ss_pred ceeeecCCC--------CCCC-CCCceeecCccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHh---
Q 002674 179 EFLIRLPGY--------CPMP-AFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE--- 242 (894)
Q Consensus 179 ~~ll~~p~~--------~~~p-~~~~v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~--- 242 (894)
+.++..+.. ...+ ....+++.|+.... ....+...++++++++++ .+++++|..... ..++++
T Consensus 165 d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~l~~~K~~~~li~a~~~ 243 (405)
T TIGR03449 165 DRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDT-KVVAFVGRIQPLKAPDVLLRAVAE 243 (405)
T ss_pred CeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCCC-cEEEEecCCCcccCHHHHHHHHHH
Confidence 333222110 0001 11123334443221 122344567778876544 467888887653 123332
Q ss_pred hCC--CC--cEEEEeCCCC----C------------CCCCCeEECCCCC--CHHHHHhhcCEEEecC---C-hhHHHHHH
Q 002674 243 YLP--SG--WKCLVCGASD----S------------QLPPNFIKLPKDA--YTPDFMAASDCMLGKI---G-YGTVSEAL 296 (894)
Q Consensus 243 Ll~--~~--~~~vv~G~~~----~------------~lp~nv~v~g~~~--~vp~ll~~~d~~I~~~---G-~~t~~Eal 296 (894)
+.. ++ ++++++|... . .+.++|+++|+.+ .++++|+.+|++|... | ..++.|||
T Consensus 244 l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAm 323 (405)
T TIGR03449 244 LLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQ 323 (405)
T ss_pred HHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHH
Confidence 211 33 6777787411 1 0356899998863 5568999999998642 3 36899999
Q ss_pred HcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 297 AYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 297 ~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
++|+|+|+...++.. +.+.+...|+.++..+. +.+.++|.++++++
T Consensus 324 a~G~Pvi~~~~~~~~------e~i~~~~~g~~~~~~d~--~~la~~i~~~l~~~ 369 (405)
T TIGR03449 324 ACGTPVVAARVGGLP------VAVADGETGLLVDGHDP--ADWADALARLLDDP 369 (405)
T ss_pred HcCCCEEEecCCCcH------hhhccCCceEECCCCCH--HHHHHHHHHHHhCH
Confidence 999999998754433 33556667888876654 58889999998654
No 108
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.91 E-value=1.2e-07 Score=107.97 Aligned_cols=128 Identities=19% Similarity=0.097 Sum_probs=86.9
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh---hhhHHh---hC--CCCcEEEEeCCCCCC-----------------CCCCeEECC
Q 002674 214 RKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------------LPPNFIKLP 268 (894)
Q Consensus 214 r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~---Ll--~~~~~~vv~G~~~~~-----------------lp~nv~v~g 268 (894)
++.++.++++ .++++.|+.... ..+++. +. .++++++++|..... +.+|+.++|
T Consensus 211 ~~~~~~~~~~-~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 289 (398)
T cd03800 211 RARLLRDPDK-PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPG 289 (398)
T ss_pred HHhhccCCCC-cEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEec
Confidence 3444444444 567788887652 223332 22 246788888754310 346898898
Q ss_pred CCC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHH
Q 002674 269 KDA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPY 342 (894)
Q Consensus 269 ~~~--~vp~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~ 342 (894)
+.+ .+..+++.+|+++..+ | ..++.|||++|+|+|+.+..+ ..+.+++.+.|..++..+ .+.+.++
T Consensus 290 ~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~------~~e~i~~~~~g~~~~~~~--~~~l~~~ 361 (398)
T cd03800 290 RVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG------PRDIVVDGVTGLLVDPRD--PEALAAA 361 (398)
T ss_pred cCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC------HHHHccCCCCeEEeCCCC--HHHHHHH
Confidence 874 4668899999999653 2 368999999999999876432 345566667898887665 4689999
Q ss_pred HHHHHhcC
Q 002674 343 LERAISLK 350 (894)
Q Consensus 343 l~~ll~~~ 350 (894)
|.++++++
T Consensus 362 i~~l~~~~ 369 (398)
T cd03800 362 LRRLLTDP 369 (398)
T ss_pred HHHHHhCH
Confidence 99998665
No 109
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.91 E-value=2.5e-07 Score=106.27 Aligned_cols=119 Identities=18% Similarity=0.073 Sum_probs=79.8
Q ss_pred CCcEEEEEcCCCCCh---hhhHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhc
Q 002674 222 DVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~~---Ll--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~--~vp~ll~~~ 280 (894)
+.+.++++.|..... ..+++. +. .+++++++.|.+... +.++|.++|+.+ .++.+|+.+
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~a 270 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQG 270 (398)
T ss_pred CCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhC
Confidence 345678888877652 223332 21 367888888865421 456798888863 567899999
Q ss_pred CEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 281 DCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 281 d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
|++|..+ |+ .++.|||++|+|+|+.+.++..| .+. .|.+..... + .+.+.+++.+++++.
T Consensus 271 d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e------~i~-~~~~~~~~~-~--~~~l~~~l~~~l~~~ 334 (398)
T cd03796 271 HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPE------VLP-PDMILLAEP-D--VESIVRKLEEAISIL 334 (398)
T ss_pred CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchh------hee-CCceeecCC-C--HHHHHHHHHHHHhCh
Confidence 9999754 22 58999999999999987654433 233 344444332 3 468889999998754
No 110
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.89 E-value=5.5e-07 Score=99.00 Aligned_cols=117 Identities=16% Similarity=0.043 Sum_probs=79.5
Q ss_pred CCcEEEEEcCCCCCh---hhhHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCE
Q 002674 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDC 282 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~---~Ll~--~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~ 282 (894)
..+.++++.|+.... ..+++ .+.. ++++++++|.+... +.+++.+.++.++++++++.||+
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~ 266 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADL 266 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCE
Confidence 445678888887642 12333 2222 46788888865421 35789999988888899999999
Q ss_pred EEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 283 MLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 283 ~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
+|..+ ..+++.||+++|+|+|+.+.++ ..+.+.+...|..++..+. +.+...++.+
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~~~--~~~~~~~~~i 326 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCPG------PREILEDGENGLLVPVGDE--AALAAAALAL 326 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCCC------hHHHhcCCCceEEECCCCH--HHHHHHHHHH
Confidence 99653 3468999999999999876432 3455777788988876654 3553333333
No 111
>PTZ00299 homoserine kinase; Provisional
Probab=98.89 E-value=2.7e-08 Score=110.26 Aligned_cols=115 Identities=19% Similarity=0.193 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHhhcC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIH---PRDLALLCQKVENHIVG 686 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~---~~~la~~a~~~E~~~~G 686 (894)
.|.+..++..+++..+....+|+++.|.++||.++|||||||..+|.+.|++.++|.+++ +++|.++|.+.|.+
T Consensus 61 ~nlv~~a~~~~~~~~~~~~~~g~~i~i~k~IP~~~GLGSSsA~avA~l~a~n~l~g~~l~~~~~~el~~~A~~~EGH--- 137 (336)
T PTZ00299 61 DNMVVQACRLAFEEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAGFVAGMKLCGLTMETENEEALLQAIAKFEGH--- 137 (336)
T ss_pred chHHHHHHHHHHHHhcCCCCCceEEEEecCCCccCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHhhcCC---
Confidence 355555555556666542124899999999999999999999999999999999999995 89999999998853
Q ss_pred CCCChhhhH-HhhcCCCCeEEEEEecCCce-eEEeecCCCeEEEEEeCCC
Q 002674 687 APCGVMDQM-ASACGEANKLLAMVCQPAEL-LGVVEIPSHIRFWGIDSGI 734 (894)
Q Consensus 687 ~~~G~mDq~-as~~G~~~~~~~~~~~~~~~-~~~v~~p~~~~~vv~~sgv 734 (894)
.|+. ++++||. ++.....+.+. ...++.|+++.++++..+.
T Consensus 138 -----pDNVapal~GG~--~~~~~~~~ge~~~~~i~~~~~~~~vv~iP~~ 180 (336)
T PTZ00299 138 -----PDNAAPAIYGGI--QLVYKKDNGRFLTYRVPTPPNLSVVLFVPHN 180 (336)
T ss_pred -----cccHHHHHhCCE--EEEEecCCCceEEEecCCCCCeEEEEEECCC
Confidence 3854 7888994 22221122332 1355666789888876654
No 112
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.87 E-value=4.4e-07 Score=103.47 Aligned_cols=120 Identities=12% Similarity=-0.030 Sum_probs=80.3
Q ss_pred CCcEEEEEcCCCCCh---hhhHH---hhC--C---CCcEEEEeCCCCC--------------------CCCCCeEECCCC
Q 002674 222 DVKLLILNFGGQPAG---WKLKE---EYL--P---SGWKCLVCGASDS--------------------QLPPNFIKLPKD 270 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~---~Ll--~---~~~~~vv~G~~~~--------------------~lp~nv~v~g~~ 270 (894)
+...++++.|..... ..+++ .+. . ++++++++|.... .+.++|.++|+.
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~ 288 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSI 288 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 344677788876652 12333 222 1 4678888886431 134678999887
Q ss_pred CC--HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHH
Q 002674 271 AY--TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (894)
Q Consensus 271 ~~--vp~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~ 344 (894)
+. +.++|+.+|+++..+ | ..++.|||++|+|+|+...++.. +.+...+.|..++. + ++.+.++|.
T Consensus 289 ~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~------e~i~~~~~g~~~~~-~--~~~~a~~i~ 359 (392)
T cd03805 289 SDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPL------ETVVDGETGFLCEP-T--PEEFAEAML 359 (392)
T ss_pred ChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcH------HHhccCCceEEeCC-C--HHHHHHHHH
Confidence 53 357899999999643 2 25789999999999998754332 33555567877753 3 468889999
Q ss_pred HHHhcC
Q 002674 345 RAISLK 350 (894)
Q Consensus 345 ~ll~~~ 350 (894)
++++++
T Consensus 360 ~l~~~~ 365 (392)
T cd03805 360 KLANDP 365 (392)
T ss_pred HHHhCh
Confidence 998776
No 113
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.87 E-value=3.4e-07 Score=101.11 Aligned_cols=293 Identities=18% Similarity=0.049 Sum_probs=153.7
Q ss_pred CcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHH
Q 002674 26 GFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (894)
Q Consensus 26 G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 105 (894)
+.|+..++..++++|.+.||+|++++............. . ... . .. . ...... . . ... ..
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~-~--~~~-~-~~-~----~~~~~~-~-~--~~~------~~ 72 (374)
T cd03801 13 VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVG-G--IVV-V-RP-P----PLLRVR-R-L--LLL------LL 72 (374)
T ss_pred cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeec-C--cce-e-cC-C----cccccc-h-h--HHH------HH
Confidence 479999999999999999999999987642211111000 0 000 0 00 0 000000 0 0 000 01
Q ss_pred hHHHHHHHHhcCCCcEEEECCchhH---HHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceee
Q 002674 106 ILKDEVEWLNSIKADLVVSDVVPVA---CRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLI 182 (894)
Q Consensus 106 ll~~~~~~L~~~~PDlVV~D~~~~a---~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~~~ll 182 (894)
.......+++..+||+|+....... ...++..++|.+..-+-.+......... .............+..++.++
T Consensus 73 ~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i 149 (374)
T cd03801 73 LALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELG---LLLKLARALERRALRRADRII 149 (374)
T ss_pred HHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccchh---HHHHHHHHHHHHHHHhCCEEE
Confidence 1123355677889999998763322 2466778999876532211100000000 000000000111122233333
Q ss_pred ecCCCC------CCCC-CCceeecC--cccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHh---hCC--
Q 002674 183 RLPGYC------PMPA-FRDVIDVP--LVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YLP-- 245 (894)
Q Consensus 183 ~~p~~~------~~p~-~~~v~~vp--~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~---Ll~-- 245 (894)
..+... ..+. ..++..+| ...........+.+...... ..+.+++.+|+.... ..+++. +..
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~ 228 (374)
T cd03801 150 AVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIP-EDEPVILFVGRLVPRKGVDLLLEALAKLRKEY 228 (374)
T ss_pred EecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCCc-CCCeEEEEecchhhhcCHHHHHHHHHHHhhhc
Confidence 221110 0000 01222232 22111111112223333332 344677888876642 123332 222
Q ss_pred CCcEEEEeCCCCC-----------CCCCCeEECCCC--CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCC
Q 002674 246 SGWKCLVCGASDS-----------QLPPNFIKLPKD--AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRD 308 (894)
Q Consensus 246 ~~~~~vv~G~~~~-----------~lp~nv~v~g~~--~~vp~ll~~~d~~I~~----~G~~t~~Eal~~G~P~l~ip~~ 308 (894)
++++++++|.... .++.++.+.++. +.+.++|..||++|.. +..+++.||+++|+|+|+.+.+
T Consensus 229 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~ 308 (374)
T cd03801 229 PDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG 308 (374)
T ss_pred CCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC
Confidence 3678888885432 146789988888 6677999999999964 3457899999999999998754
Q ss_pred CCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 309 ~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
.. .+.+...+.|..++..+ .+.+.++|.++++++
T Consensus 309 ~~------~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 342 (374)
T cd03801 309 GI------PEVVEDGETGLLVPPGD--PEALAEAILRLLDDP 342 (374)
T ss_pred Ch------hHHhcCCcceEEeCCCC--HHHHHHHHHHHHcCh
Confidence 33 44466677888887765 468899999998766
No 114
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.85 E-value=4.9e-07 Score=102.14 Aligned_cols=127 Identities=17% Similarity=0.157 Sum_probs=83.6
Q ss_pred HHHhCCCCCCcEEEEEcCCCCC---h---hhhHHhh---CCCCcEEEEeCCCC--CC-------C---CCCeEECCCC--
Q 002674 214 RKELGIEDDVKLLILNFGGQPA---G---WKLKEEY---LPSGWKCLVCGASD--SQ-------L---PPNFIKLPKD-- 270 (894)
Q Consensus 214 r~~lgl~~~~p~Vlvs~Gs~~~---~---~~l~~~L---l~~~~~~vv~G~~~--~~-------l---p~nv~v~g~~-- 270 (894)
++.+++ +++++|++++|+... . ..+++++ ...++.++..|... .. + .+|++++++.
T Consensus 190 ~~~~~~-~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 190 LELLGL-LPKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred hhhccc-CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 345666 356778888887653 1 1233332 22235555544332 11 2 4688887654
Q ss_pred CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 271 AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 271 ~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
.+++.+|+.||+||+.+| +.+.|++++|+|+|.++.. ++ ...+.+.|.++.+.. + .+.+.+++.++++++
T Consensus 269 ~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~----~~~~~~~g~~~~~~~-~--~~~i~~~i~~ll~~~ 338 (363)
T cd03786 269 LYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRDR--TE----RPETVESGTNVLVGT-D--PEAILAAIEKLLSDE 338 (363)
T ss_pred HHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc----cchhhheeeEEecCC-C--HHHHHHHHHHHhcCc
Confidence 467789999999999999 7788999999999998732 22 334566787766642 2 468889999999775
Q ss_pred C
Q 002674 351 P 351 (894)
Q Consensus 351 ~ 351 (894)
.
T Consensus 339 ~ 339 (363)
T cd03786 339 F 339 (363)
T ss_pred h
Confidence 3
No 115
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.85 E-value=9.7e-07 Score=98.26 Aligned_cols=126 Identities=21% Similarity=0.214 Sum_probs=85.6
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh---hhhHH---hhCC--CCcEEEEeCCCCCC-------------CCCCeEECCCCC-
Q 002674 214 RKELGIEDDVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-------------LPPNFIKLPKDA- 271 (894)
Q Consensus 214 r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~---~Ll~--~~~~~vv~G~~~~~-------------lp~nv~v~g~~~- 271 (894)
++.++.+.+ +.+++++|+.... ..+++ .+.. ++++++++|..... +.+++++.|+++
T Consensus 194 ~~~~~~~~~-~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 272 (375)
T cd03821 194 RRKFPILPD-KRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYG 272 (375)
T ss_pred hhhccCCCC-CcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCCh
Confidence 444554444 4567788877652 12333 2322 57888888865321 357899999886
Q ss_pred -CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 272 -YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 272 -~vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
.+.++|+.||++|..+- .+++.|||++|+|+|+.+..+. .+.+.. +.|...+.++ +.+.++|.++
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~------~~~~~~-~~~~~~~~~~---~~~~~~i~~l 342 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPW------QELIEY-GCGWVVDDDV---DALAAALRRA 342 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCH------HHHhhc-CceEEeCCCh---HHHHHHHHHH
Confidence 56789999999997542 4689999999999999874432 233444 7777776432 6888999999
Q ss_pred HhcC
Q 002674 347 ISLK 350 (894)
Q Consensus 347 l~~~ 350 (894)
++++
T Consensus 343 ~~~~ 346 (375)
T cd03821 343 LELP 346 (375)
T ss_pred HhCH
Confidence 8765
No 116
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.83 E-value=3.4e-07 Score=103.96 Aligned_cols=128 Identities=15% Similarity=0.023 Sum_probs=85.4
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCCh--h-hhHHh---hC--CCCcEEEEeCCCCC----------------CCCCCeEEC
Q 002674 212 EVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS----------------QLPPNFIKL 267 (894)
Q Consensus 212 e~r~~lgl~~~~p~Vlvs~Gs~~~~--~-~l~~~---Ll--~~~~~~vv~G~~~~----------------~lp~nv~v~ 267 (894)
..++.++++++++ ++++.|..... . .+++. +. .++++++++|.+.. .+.+++.++
T Consensus 179 ~~~~~~~~~~~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 257 (372)
T cd03792 179 YILEKYGIDPERP-YITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVL 257 (372)
T ss_pred HHHHHhCCCCCCc-EEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEE
Confidence 5667788766665 67778887653 1 23332 22 25678888886531 034567777
Q ss_pred CCC----CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccH
Q 002674 268 PKD----AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (894)
Q Consensus 268 g~~----~~vp~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l 339 (894)
++. ..++.+++++|+|+..+ | ..++.|||++|+|+|+.+.++..| .+.....|...+. .+.+
T Consensus 258 ~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~------~i~~~~~g~~~~~----~~~~ 327 (372)
T cd03792 258 TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPL------QIEDGETGFLVDT----VEEA 327 (372)
T ss_pred ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchh------hcccCCceEEeCC----cHHH
Confidence 764 34568999999999764 2 358999999999999987544333 3555566776652 3467
Q ss_pred HHHHHHHHhcC
Q 002674 340 KPYLERAISLK 350 (894)
Q Consensus 340 ~~~l~~ll~~~ 350 (894)
..+|.+++.++
T Consensus 328 a~~i~~ll~~~ 338 (372)
T cd03792 328 AVRILYLLRDP 338 (372)
T ss_pred HHHHHHHHcCH
Confidence 77888888654
No 117
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.82 E-value=5.1e-07 Score=104.63 Aligned_cols=81 Identities=12% Similarity=0.029 Sum_probs=56.6
Q ss_pred eEECCCCCCHHHHHhhcCE-EEe----cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCccc
Q 002674 264 FIKLPKDAYTPDFMAASDC-MLG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGH 338 (894)
Q Consensus 264 v~v~g~~~~vp~ll~~~d~-~I~----~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~ 338 (894)
+.+.+....++++|+.||+ |++ .+|..++.|||++|+|+|+.|.. ..+....+.+.+.|+++.. .| ++.
T Consensus 304 v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~--~~~~e~~~~~~~~g~~~~~--~d--~~~ 377 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHT--FNFKEIFERLLQAGAAIQV--ED--AED 377 (425)
T ss_pred EEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCc--cCHHHHHHHHHHCCCeEEE--CC--HHH
Confidence 3334434568899999999 453 24556799999999999998742 3344456666677776553 33 357
Q ss_pred HHHHHHHHHhcC
Q 002674 339 WKPYLERAISLK 350 (894)
Q Consensus 339 l~~~l~~ll~~~ 350 (894)
+.++|.++++++
T Consensus 378 La~~l~~ll~~~ 389 (425)
T PRK05749 378 LAKAVTYLLTDP 389 (425)
T ss_pred HHHHHHHHhcCH
Confidence 889999998765
No 118
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.81 E-value=9.3e-08 Score=103.27 Aligned_cols=113 Identities=15% Similarity=0.133 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
.|.+.-++..+.+..|.+ .|++|.+..+||+|+|||||||-.+|++.+++++++.+++++++.+++.+.|-
T Consensus 61 ~Nlv~ra~~~l~~~~g~~--~~v~I~i~K~IP~gaGLGggSS~aAa~L~~ln~l~~~~ls~~eL~~lA~~lGa------- 131 (288)
T PRK00650 61 SNSIWKSVALFRRYTGIT--TPVSWRVVKQIPIGAGLAGGSSNAATALFALNQIFQTGLSDEELRSLAEKIGM------- 131 (288)
T ss_pred ccHHHHHHHHHHHHhCCC--CCeEEEEeeCCCCcCCcCcchhHHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC-------
Confidence 577777777777667754 59999999999999999999999999999999999999999999999998763
Q ss_pred ChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 690 G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
|--.++.||. ++. ....+..++++.+++..++++..++.-+|
T Consensus 132 ---DvPffl~~g~--a~~--~G~Ge~l~~~~~~~~~~~vlv~P~~~vsT 173 (288)
T PRK00650 132 ---DTPFFFSTGS--ALG--VGRGEKIIALEESVSDRYVLYFSSEGVLT 173 (288)
T ss_pred ---cchhhhcCce--EEE--EecCCEEEECcCCCCceEEEEeCCCCCCh
Confidence 4444444442 222 22233335565555677888877666554
No 119
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.81 E-value=9.4e-07 Score=98.66 Aligned_cols=121 Identities=17% Similarity=0.099 Sum_probs=83.4
Q ss_pred CCcEEEEEcCCCCCh---hhhHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhc
Q 002674 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~---~Ll~--~~~~~vv~G~~~~~-----------lp~nv~v~g~~~--~vp~ll~~~ 280 (894)
+.+.+++++|+.... ..+++ .+.. +++.++++|.+... +++||++.|+.+ .+..+|+.|
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a 256 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA 256 (355)
T ss_pred CCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhC
Confidence 345677788876542 12333 2222 46778888865421 467899999873 567899999
Q ss_pred CEEEec----------CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 281 DCMLGK----------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 281 d~~I~~----------~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
|+++.. +..+++.|||++|+|+|+.+..... +.+.....|..+...+ .+.+.++|.++++++
T Consensus 257 di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~------~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 328 (355)
T cd03799 257 DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIP------ELVEDGETGLLVPPGD--PEALADAIERLLDDP 328 (355)
T ss_pred CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcc------hhhhCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 999974 2346899999999999998754332 2345555788887655 468889999998765
No 120
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.80 E-value=5.9e-07 Score=99.63 Aligned_cols=274 Identities=14% Similarity=0.061 Sum_probs=145.0
Q ss_pred EEEEEecCCC-------CcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCH
Q 002674 16 LVFAYYVTGH-------GFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDR 88 (894)
Q Consensus 16 ~~Il~~v~~~-------G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~ 88 (894)
|+|+++.+.. +.|--.....++++|+++||+|++++......... ......... ....
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~--------~~~~~~~~~-------~~~~ 65 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP--------LVPVVPEPL-------RLDA 65 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc--------eeeccCCCc-------cccc
Confidence 4666665432 34556778899999999999999998654211000 000000000 0000
Q ss_pred HHHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHH
Q 002674 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIV 168 (894)
Q Consensus 89 ~~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~ 168 (894)
. ...... ........+++++.+||+|++........+++..++|.|...+..........
T Consensus 66 ~--~~~~~~------~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~------------ 125 (335)
T cd03802 66 P--GRDRAE------AEALALAERALAAGDFDIVHNHSLHLPLPFARPLPVPVVTTLHGPPDPELLKL------------ 125 (335)
T ss_pred c--hhhHhh------HHHHHHHHHHHhcCCCCEEEecCcccchhhhcccCCCEEEEecCCCCcccchH------------
Confidence 0 000000 11123345678889999999876444333677889998765332110000000
Q ss_pred HHHHhhccccceeeecCCCC--CCC--CCCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHH
Q 002674 169 WQIAEDYSHCEFLIRLPGYC--PMP--AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKE 241 (894)
Q Consensus 169 ~~l~~~y~~~~~ll~~p~~~--~~p--~~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~ 241 (894)
.......+.++..+... ..+ ....+++.|+....... .+.+..++++.|..... ..+++
T Consensus 126 ---~~~~~~~~~~~~~s~~~~~~~~~~~~~~vi~ngvd~~~~~~-----------~~~~~~~i~~~Gr~~~~Kg~~~li~ 191 (335)
T cd03802 126 ---YYAARPDVPFVSISDAQRRPWPPLPWVATVHNGIDLDDYPF-----------RGPKGDYLLFLGRISPEKGPHLAIR 191 (335)
T ss_pred ---HHhhCcCCeEEEecHHHHhhcccccccEEecCCcChhhCCC-----------CCCCCCEEEEEEeeccccCHHHHHH
Confidence 00000111111110000 000 11122333332211100 11223456677776542 22344
Q ss_pred hhCCCCcEEEEeCCCCCC---------C---CCCeEECCCCCC--HHHHHhhcCEEEecC----C-hhHHHHHHHcCCcE
Q 002674 242 EYLPSGWKCLVCGASDSQ---------L---PPNFIKLPKDAY--TPDFMAASDCMLGKI----G-YGTVSEALAYKLPF 302 (894)
Q Consensus 242 ~Ll~~~~~~vv~G~~~~~---------l---p~nv~v~g~~~~--vp~ll~~~d~~I~~~----G-~~t~~Eal~~G~P~ 302 (894)
.....++++++.|.+... . .+++.++|+.++ ++.+|+.+|+++... | ..++.|||++|+|+
T Consensus 192 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~Pv 271 (335)
T cd03802 192 AARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPV 271 (335)
T ss_pred HHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCE
Confidence 444467888888876421 1 578999998754 468899999998642 2 35899999999999
Q ss_pred EEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHh
Q 002674 303 VFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (894)
Q Consensus 303 l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~ 348 (894)
|+.+.++..| .+.....|..++. .+.+.++|.+++.
T Consensus 272 I~~~~~~~~e------~i~~~~~g~l~~~----~~~l~~~l~~l~~ 307 (335)
T cd03802 272 IAFRRGAVPE------VVEDGVTGFLVDS----VEELAAAVARADR 307 (335)
T ss_pred EEeCCCCchh------heeCCCcEEEeCC----HHHHHHHHHHHhc
Confidence 9987654433 3444446877764 5688888888753
No 121
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.79 E-value=2.5e-07 Score=104.66 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=84.0
Q ss_pred cEEEEEcCCCCC---h--hhhHHhh--CCCCcEEEEeCCCCCC-----------CCCCeEECCCCCC----HHHHHhhcC
Q 002674 224 KLLILNFGGQPA---G--WKLKEEY--LPSGWKCLVCGASDSQ-----------LPPNFIKLPKDAY----TPDFMAASD 281 (894)
Q Consensus 224 p~Vlvs~Gs~~~---~--~~l~~~L--l~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~----vp~ll~~~d 281 (894)
+.+++++|.... . ..+++++ +.++++++++|.+... ++++|++.|+++. ++++++.+|
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d 259 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVS 259 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCc
Confidence 456788887542 1 2344443 2346788888876421 4678999998754 456677899
Q ss_pred EEEecCC----hhHHHHHHHcCCcEEEEe-CCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCc
Q 002674 282 CMLGKIG----YGTVSEALAYKLPFVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY 353 (894)
Q Consensus 282 ~~I~~~G----~~t~~Eal~~G~P~l~ip-~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~ 353 (894)
++|..+- ..++.|||++|+|+|+.. ..+.. +.++....|..++..+. +.+.++|.++++++..+
T Consensus 260 ~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~------eiv~~~~~G~lv~~~d~--~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPR------DIIKPGLNGELYTPGNI--DEFVGKLNKVISGEVKY 328 (359)
T ss_pred EEEECCcccCcChHHHHHHHcCCCEEEeCCCCChH------HHccCCCceEEECCCCH--HHHHHHHHHHHhCcccC
Confidence 9997542 478999999999999986 33222 33555556888876664 68999999999888543
No 122
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.75 E-value=1.1e-06 Score=100.70 Aligned_cols=82 Identities=11% Similarity=-0.081 Sum_probs=61.7
Q ss_pred CCCeEECCCCC--CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCC
Q 002674 261 PPNFIKLPKDA--YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (894)
Q Consensus 261 p~nv~v~g~~~--~vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~ 334 (894)
.++|+++|+.+ .++.+|+.+|++|..+- ..++.|||++|+|+|+...++.. +.+.....|..++..|
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~------e~i~~~~~G~lv~~~d- 352 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR------EVITDGENGLLVDFFD- 352 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch------hhcccCCceEEcCCCC-
Confidence 35788888874 46689999999996432 24789999999999998754333 3355556788887666
Q ss_pred CcccHHHHHHHHHhcC
Q 002674 335 LTGHWKPYLERAISLK 350 (894)
Q Consensus 335 ~~~~l~~~l~~ll~~~ 350 (894)
++.+.++|.++++++
T Consensus 353 -~~~la~~i~~ll~~~ 367 (396)
T cd03818 353 -PDALAAAVIELLDDP 367 (396)
T ss_pred -HHHHHHHHHHHHhCH
Confidence 468999999999766
No 123
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.74 E-value=2.3e-06 Score=94.79 Aligned_cols=122 Identities=19% Similarity=0.091 Sum_probs=84.8
Q ss_pred CCcEEEEEcCCCCCh---hhhHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhc
Q 002674 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~---~Ll~--~~~~~vv~G~~~~~-----------lp~nv~v~g~~~--~vp~ll~~~ 280 (894)
+.+.++++.|+.... ..+++ .+.. ++++++++|.+... +.+|+.+.|+.+ .+.+++..|
T Consensus 200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (377)
T cd03798 200 EDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA 279 (377)
T ss_pred CCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc
Confidence 345678888876652 12333 2222 46778888865421 357899998875 356899999
Q ss_pred CEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCC
Q 002674 281 DCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (894)
Q Consensus 281 d~~I~~----~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~ 351 (894)
|++|.. +..+++.||+++|+|+|+.+... ..+.+...+.|..++..+. +.+.++|.++++++.
T Consensus 280 d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~------~~~~~~~~~~g~~~~~~~~--~~l~~~i~~~~~~~~ 346 (377)
T cd03798 280 DVFVLPSLREGFGLVLLEAMACGLPVVATDVGG------IPEIITDGENGLLVPPGDP--EALAEAILRLLADPW 346 (377)
T ss_pred CeeecchhhccCChHHHHHHhcCCCEEEecCCC------hHHHhcCCcceeEECCCCH--HHHHHHHHHHhcCcH
Confidence 999954 34578999999999999876432 3445666667788876664 588899999987763
No 124
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.74 E-value=6.5e-07 Score=100.86 Aligned_cols=119 Identities=18% Similarity=0.085 Sum_probs=84.5
Q ss_pred cEEEEEcCCCCCh---hhhHHh---hC--CCCcEEEEeCCCCC---------C--CCCCeEECCCCC--CHHHHHhhcCE
Q 002674 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS---------Q--LPPNFIKLPKDA--YTPDFMAASDC 282 (894)
Q Consensus 224 p~Vlvs~Gs~~~~---~~l~~~---Ll--~~~~~~vv~G~~~~---------~--lp~nv~v~g~~~--~vp~ll~~~d~ 282 (894)
+.++++.|+.... ..++++ +. .++++++++|.+.. . +.+++++.|+.+ .++++|+.+|+
T Consensus 188 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~ 267 (367)
T cd05844 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARI 267 (367)
T ss_pred CcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCE
Confidence 4567777877653 223333 22 25788888886541 1 367899998874 47789999999
Q ss_pred EEecC----------ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 283 MLGKI----------GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 283 ~I~~~----------G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+|..+ -.+++.|||++|+|+|+.+..+ +.+.+.+.+.|..++..+. +.|.++|.++++++
T Consensus 268 ~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~------~~e~i~~~~~g~~~~~~d~--~~l~~~i~~l~~~~ 337 (367)
T cd05844 268 FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG------IPEAVEDGETGLLVPEGDV--AALAAALGRLLADP 337 (367)
T ss_pred EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC------chhheecCCeeEEECCCCH--HHHHHHHHHHHcCH
Confidence 98643 2478999999999999987543 3445667778888876554 58899999998665
No 125
>PLN02275 transferase, transferring glycosyl groups
Probab=98.73 E-value=2.2e-06 Score=97.54 Aligned_cols=92 Identities=12% Similarity=0.102 Sum_probs=64.8
Q ss_pred CCcEEEEeCCCCCC---------C-CCCeEECC-CC--CCHHHHHhhcCEEEec----CC---hhHHHHHHHcCCcEEEE
Q 002674 246 SGWKCLVCGASDSQ---------L-PPNFIKLP-KD--AYTPDFMAASDCMLGK----IG---YGTVSEALAYKLPFVFV 305 (894)
Q Consensus 246 ~~~~~vv~G~~~~~---------l-p~nv~v~g-~~--~~vp~ll~~~d~~I~~----~G---~~t~~Eal~~G~P~l~i 305 (894)
++++++++|.+... + -+|+.+.+ +. +.++++|+.+|++|.. .| .+++.|||++|+|+|+.
T Consensus 260 ~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~ 339 (371)
T PLN02275 260 PRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAV 339 (371)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEe
Confidence 56888899876531 1 14577655 33 4678999999999852 12 35799999999999998
Q ss_pred eCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHH
Q 002674 306 RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (894)
Q Consensus 306 p~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll 347 (894)
..++ +.+.+++.+.|..++ + ++.+.++|.+++
T Consensus 340 ~~gg------~~eiv~~g~~G~lv~--~--~~~la~~i~~l~ 371 (371)
T PLN02275 340 SYSC------IGELVKDGKNGLLFS--S--SSELADQLLELL 371 (371)
T ss_pred cCCC------hHHHccCCCCeEEEC--C--HHHHHHHHHHhC
Confidence 6432 455566777898886 2 467888887764
No 126
>PRK00654 glgA glycogen synthase; Provisional
Probab=98.70 E-value=2.1e-06 Score=100.73 Aligned_cols=138 Identities=18% Similarity=0.135 Sum_probs=88.7
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hhHHh---hCCCCcEEEEeCCCCC-----------CCCCCeEE-CCCCC
Q 002674 210 RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YLPSGWKCLVCGASDS-----------QLPPNFIK-LPKDA 271 (894)
Q Consensus 210 ~~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~-~l~~~---Ll~~~~~~vv~G~~~~-----------~lp~nv~v-~g~~~ 271 (894)
+..+++.+|++++...++++.|..... . .++++ +...++++++.|.+.. +++.++.+ .+|.+
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~ 347 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDE 347 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCH
Confidence 346788889875444577888887653 2 23332 3334678888886542 14566653 56654
Q ss_pred C-HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 272 Y-TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 272 ~-vp~ll~~~d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
. ++.+++.||++|..+ |. .+.+|||++|+|+|+....+..|...+...-...+.|+.++..+. +.+.++|.++
T Consensus 348 ~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~--~~la~~i~~~ 425 (466)
T PRK00654 348 ALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNA--EDLLRALRRA 425 (466)
T ss_pred HHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCH--HHHHHHHHHH
Confidence 4 357899999999753 22 589999999999999876555553111000012267888887663 5788888888
Q ss_pred Hhc
Q 002674 347 ISL 349 (894)
Q Consensus 347 l~~ 349 (894)
++.
T Consensus 426 l~~ 428 (466)
T PRK00654 426 LEL 428 (466)
T ss_pred HHH
Confidence 753
No 127
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase
Probab=98.69 E-value=1.6e-07 Score=102.89 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
.+.+..++..+.+..+.. .+++|.+.+++|.++|||||||..+|++.|++.+++.+++++++++++.+.| |..|
T Consensus 66 ~~~v~~~l~~~~~~~~~~--~~v~I~~~n~iP~~aGLgSSAA~~aA~~~Al~~l~~l~l~~~eL~~lA~~gs----Gsa~ 139 (305)
T TIGR01240 66 NEKTSNCLDDFRQLRKEQ--EKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLPLDTSELSRIARKGS----GSAC 139 (305)
T ss_pred hHHHHHHHHHHHHhcCCC--CceEEEEecCCCCCCccchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhc----CCee
Confidence 456666666665555543 5899999999999999999999999999999999999999999999999876 5566
Q ss_pred ChhhhHHhhcCCC
Q 002674 690 GVMDQMASACGEA 702 (894)
Q Consensus 690 G~mDq~as~~G~~ 702 (894)
+ |++||.
T Consensus 140 ~------s~~GG~ 146 (305)
T TIGR01240 140 R------SLFGGY 146 (305)
T ss_pred e------eeecCe
Confidence 5 899995
No 128
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.68 E-value=3.5e-06 Score=94.11 Aligned_cols=119 Identities=16% Similarity=0.068 Sum_probs=83.1
Q ss_pred CcEEEEEcCCCCCh---hhhHHhh--CCCCcEEEEeCCCCCC-----------CCCCeEECCCCCC--HHHHHhhcCEEE
Q 002674 223 VKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDSQ-----------LPPNFIKLPKDAY--TPDFMAASDCML 284 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~---~~l~~~L--l~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~--vp~ll~~~d~~I 284 (894)
.+.++++.|+.... ..+++.+ +. +++++++|.+... +.+||+++|+++. ++.+++.||+++
T Consensus 190 ~~~~i~~~G~~~~~K~~~~li~a~~~l~-~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i 268 (357)
T cd03795 190 GRPFFLFVGRLVYYKGLDVLLEAAAALP-DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268 (357)
T ss_pred CCcEEEEecccccccCHHHHHHHHHhcc-CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEE
Confidence 44577888887652 2233332 22 6788888865421 3578999998863 568999999998
Q ss_pred ecC-----C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 285 GKI-----G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 285 ~~~-----G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~-~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
... | ..++.||+++|+|+|+.+.+...+ .+.. .+.|..++..+. +.|.++|.++++++
T Consensus 269 ~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~------~i~~~~~~g~~~~~~d~--~~~~~~i~~l~~~~ 333 (357)
T cd03795 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS------YVNLHGVTGLVVPPGDP--AALAEAIRRLLEDP 333 (357)
T ss_pred eCCcccccccchHHHHHHHcCCCEEecCCCCchh------HHhhCCCceEEeCCCCH--HHHHHHHHHHHHCH
Confidence 432 2 357999999999999987544333 2443 678888876654 68999999999776
No 129
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.68 E-value=2.4e-06 Score=95.43 Aligned_cols=119 Identities=18% Similarity=0.190 Sum_probs=81.5
Q ss_pred CcEEEEEcCCCCCh---hhhHHh---hC--CCCcEEEEeCCCCCC----------------CCCCeEECCC-C--CCHHH
Q 002674 223 VKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ----------------LPPNFIKLPK-D--AYTPD 275 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~---~~l~~~---Ll--~~~~~~vv~G~~~~~----------------lp~nv~v~g~-~--~~vp~ 275 (894)
.+.+++++|+.... ..++++ +. .++++++++|..... +.+||.+++. . +.++.
T Consensus 184 ~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~ 263 (366)
T cd03822 184 GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPE 263 (366)
T ss_pred CCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHH
Confidence 34577778877653 123332 22 257888888864321 3467887764 4 34678
Q ss_pred HHhhcCEEEec------CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 276 FMAASDCMLGK------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 276 ll~~~d~~I~~------~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
+|+.+|++|.. +..++++|||++|+|+|+.+.+. .++ +...+.|..+...+ .+.+.++|.+++++
T Consensus 264 ~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~------i~~~~~g~~~~~~d--~~~~~~~l~~l~~~ 334 (366)
T cd03822 264 LFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEE------VLDGGTGLLVPPGD--PAALAEAIRRLLAD 334 (366)
T ss_pred HHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hhe------eeeCCCcEEEcCCC--HHHHHHHHHHHHcC
Confidence 99999999954 22358999999999999987544 332 55667788887766 36899999999876
Q ss_pred C
Q 002674 350 K 350 (894)
Q Consensus 350 ~ 350 (894)
+
T Consensus 335 ~ 335 (366)
T cd03822 335 P 335 (366)
T ss_pred h
Confidence 5
No 130
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.63 E-value=1e-05 Score=93.52 Aligned_cols=114 Identities=14% Similarity=0.045 Sum_probs=75.0
Q ss_pred EEEEEcCCCCChh---hhHHh---hC--CCCcEEEEeCCCCCC---------CCCCeE-ECCCCCCHHHHHhhcCEEEec
Q 002674 225 LLILNFGGQPAGW---KLKEE---YL--PSGWKCLVCGASDSQ---------LPPNFI-KLPKDAYTPDFMAASDCMLGK 286 (894)
Q Consensus 225 ~Vlvs~Gs~~~~~---~l~~~---Ll--~~~~~~vv~G~~~~~---------lp~nv~-v~g~~~~vp~ll~~~d~~I~~ 286 (894)
.++++.|.+.... .++++ +. .++++++++|.+... ++-+++ +.|+ ....++++.+|+||..
T Consensus 229 ~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~-~~~~~~~~~~DvFv~p 307 (462)
T PLN02846 229 KGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR-DHADPLFHDYKVFLNP 307 (462)
T ss_pred eEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC-CCHHHHHHhCCEEEEC
Confidence 3677888877642 23333 22 256888888887632 222333 3454 3345799999999976
Q ss_pred C----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 287 I----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 287 ~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+ -.+++.|||++|+|+|+...+. . +.+.+.+.|..++ + .+.+..++.+++.++
T Consensus 308 S~~Et~g~v~lEAmA~G~PVVa~~~~~-~------~~v~~~~ng~~~~--~--~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 308 STTDVVCTTTAEALAMGKIVVCANHPS-N------EFFKQFPNCRTYD--D--GKGFVRATLKALAEE 364 (462)
T ss_pred CCcccchHHHHHHHHcCCcEEEecCCC-c------ceeecCCceEecC--C--HHHHHHHHHHHHccC
Confidence 4 3368899999999999987542 2 3355566676663 3 468888999998754
No 131
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=98.63 E-value=4.3e-06 Score=98.37 Aligned_cols=131 Identities=21% Similarity=0.157 Sum_probs=87.4
Q ss_pred hHHHHHHhCCCCC-CcEEEEEcCCCCCh--hh-hHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEECC-CC
Q 002674 210 RKEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKLP-KD 270 (894)
Q Consensus 210 ~~e~r~~lgl~~~-~p~Vlvs~Gs~~~~--~~-l~~---~Ll~~~~~~vv~G~~~~~-----------lp~nv~v~g-~~ 270 (894)
+..+++.+|++.+ ...++++.|..... .+ +++ .+...+++++++|.+.+. .+.++.+.+ +.
T Consensus 276 k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~ 355 (473)
T TIGR02095 276 KEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYD 355 (473)
T ss_pred HHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Confidence 3457888898752 33467778887653 22 333 233345788888876421 356776543 33
Q ss_pred CC-HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc------CcEEEEccCCCCcccH
Q 002674 271 AY-TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHW 339 (894)
Q Consensus 271 ~~-vp~ll~~~d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~------G~g~~~~~~~~~~~~l 339 (894)
+. ++.+++.||+++..+ |. .+.+|||++|+|+|+....+..|. +... +.|+.++..+. +.+
T Consensus 356 ~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~------v~~~~~~~~~~~G~l~~~~d~--~~l 427 (473)
T TIGR02095 356 EALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT------VVDGDPEAESGTGFLFEEYDP--GAL 427 (473)
T ss_pred HHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccce------EecCCCCCCCCceEEeCCCCH--HHH
Confidence 22 457899999999764 32 588999999999998876555553 3333 77888876653 588
Q ss_pred HHHHHHHHh
Q 002674 340 KPYLERAIS 348 (894)
Q Consensus 340 ~~~l~~ll~ 348 (894)
.++|.+++.
T Consensus 428 a~~i~~~l~ 436 (473)
T TIGR02095 428 LAALSRALR 436 (473)
T ss_pred HHHHHHHHH
Confidence 888888875
No 132
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.61 E-value=2.6e-06 Score=98.14 Aligned_cols=121 Identities=15% Similarity=0.072 Sum_probs=86.0
Q ss_pred CCcEEEEEcCCCCCh--h-hhHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhc
Q 002674 222 DVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~--~-~l~~~---Ll--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~--~vp~ll~~~ 280 (894)
+.++.+++.|..... . .++++ +. .++++++++|.+... +.++|.+.|+.+ +++++|+.|
T Consensus 220 ~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~a 299 (406)
T PRK15427 220 ATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDA 299 (406)
T ss_pred CCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhC
Confidence 345678888887753 1 23333 22 256788888876421 457899999874 567899999
Q ss_pred CEEEecC---------Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHh-c
Q 002674 281 DCMLGKI---------GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS-L 349 (894)
Q Consensus 281 d~~I~~~---------G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~-~ 349 (894)
|+||..+ |. ++++|||++|+|+|+....+..| .+++...|+.++..|. +.+.++|.++++ +
T Consensus 300 Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E------~v~~~~~G~lv~~~d~--~~la~ai~~l~~~d 371 (406)
T PRK15427 300 DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPE------LVEADKSGWLVPENDA--QALAQRLAAFSQLD 371 (406)
T ss_pred CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchh------hhcCCCceEEeCCCCH--HHHHHHHHHHHhCC
Confidence 9999642 33 57899999999999987654433 3555567888887664 689999999987 5
Q ss_pred C
Q 002674 350 K 350 (894)
Q Consensus 350 ~ 350 (894)
+
T Consensus 372 ~ 372 (406)
T PRK15427 372 T 372 (406)
T ss_pred H
Confidence 5
No 133
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.61 E-value=7.1e-06 Score=95.55 Aligned_cols=83 Identities=20% Similarity=0.130 Sum_probs=61.8
Q ss_pred CCCCeEECCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002674 260 LPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (894)
Q Consensus 260 lp~nv~v~g~~--~~vp~ll~~~----d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~ 329 (894)
+..+|++.|+. +.++++|+.+ |+||..+ | ..++.|||++|+|+|+...++. .+.+.....|+.+
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~------~eiv~~~~~G~lv 388 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGP------RDIIANCRNGLLV 388 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCc------HHHhcCCCcEEEe
Confidence 34678877764 4678888866 9999754 3 3689999999999999875443 3345555678888
Q ss_pred ccCCCCcccHHHHHHHHHhcC
Q 002674 330 IRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 330 ~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+..|. +.+.++|.++++++
T Consensus 389 ~~~d~--~~la~~i~~ll~~~ 407 (439)
T TIGR02472 389 DVLDL--EAIASALEDALSDS 407 (439)
T ss_pred CCCCH--HHHHHHHHHHHhCH
Confidence 87764 58899999998765
No 134
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.59 E-value=9.3e-07 Score=96.44 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
.|++.-++..+.+..+.. .|++|.|.++||+|+|||||||-.+|++.+++++++ ++.+++.+++.+ -
T Consensus 65 ~Nlv~kA~~~l~~~~~~~--~g~~i~i~K~IP~~aGLGggSs~aaa~L~~ln~l~~--ls~~~l~~ia~~---------l 131 (283)
T PRK14610 65 NNTVQRAIGLLLRHSPVR--TNVYVKVIKNIPVSAGLAGGSADAAAVIRLLGKLWG--IDEQILNELALS---------V 131 (283)
T ss_pred CcHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCCCcCCccHHHHHHHHHHHHHHhC--CCHHHHHHHHHH---------h
Confidence 577777777777666754 599999999999999999999999999999999996 799999999886 2
Q ss_pred ChhhhHHhhcCCCCeEEEEEecCCceeEEeec-CCCeEEEEEeC-CCCcccCCCCc
Q 002674 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWGIDS-GIRHSVGGADY 743 (894)
Q Consensus 690 G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~-p~~~~~vv~~s-gv~~~~~~~~y 743 (894)
| .|--.+++||. + +..- -++..++++. +....++++.. ++.-+| +.-|
T Consensus 132 G-aDvPffl~g~~--a-~~~G-~Ge~l~~l~~~~~~~~~vl~~p~~~~~sT-~~vy 181 (283)
T PRK14610 132 G-SDVPACLDSKT--L-FVRG-IGEDILLLPDLSLPTYVVLVAPKGKFLST-RKVF 181 (283)
T ss_pred C-CCCcEEEECCe--E-EEEe-cccEEEECcccCCCCeEEEEECCCCccCh-HHHH
Confidence 4 48888888874 3 3332 3333345532 12334677755 454444 3444
No 135
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.58 E-value=7.8e-06 Score=95.17 Aligned_cols=297 Identities=15% Similarity=0.127 Sum_probs=152.8
Q ss_pred EEEecCCCCcccHHHHH-----HHHHHHHHCCC--------eEEEEeCC--C----CcccccccC--CCceeEeeeccCC
Q 002674 18 FAYYVTGHGFGHATRVV-----EVVRNLISAGH--------DVHVVTGA--P----DFVFTSEIQ--SPRLFIRKVLLDC 76 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~l-----aLA~~L~~~Gh--------~Vt~~~~~--~----~~~~~~~i~--~p~~~~~~~~~d~ 76 (894)
++++..+.|-|.+-|.+ ++++..++.+- .|+++|.. + .|+.....+ .|...+..+ +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 240 (578)
T PRK15490 164 LALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKI--T- 240 (578)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeecc--c-
Confidence 44566777877766654 57788877654 57777643 1 233222211 122222221 0
Q ss_pred CcccccccccCHHHHHHHHHHHhhcchHHhHHHHHHHHhcCCCcEEEECC---chhHHHHHHHhCCcEEEEecCchh---
Q 002674 77 GAVQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWD--- 150 (894)
Q Consensus 77 g~~~~~~~~~d~~~~l~~~~~~~~~~~~~ll~~~~~~L~~~~PDlVV~D~---~~~a~~aA~~lgIP~V~isn~~~~--- 150 (894)
+-...+... ..+.+..+..........-+.....++++.+||+|++.. ...+.++|..+|+|++..+..++.
T Consensus 241 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~ 318 (578)
T PRK15490 241 GNLFDDATI--ESPELRLLLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV 318 (578)
T ss_pred hhhhhhccc--cchHHHHHHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc
Confidence 100000000 001233344433222333345668899999999999874 245778889999999765421111
Q ss_pred --HHH-HHHHh--h--h-ccchHHHH--HHHHhhccccceeeecCCCCCCCCCCceeecCcccccCcc--C-hHHHHHH-
Q 002674 151 --FIY-AEYVM--A--A-GHHHRSIV--WQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHK--S-RKEVRKE- 216 (894)
Q Consensus 151 --~~~-~~~~~--~--~-~~~~~~i~--~~l~~~y~~~~~ll~~p~~~~~p~~~~v~~vp~~~~~~~~--~-~~e~r~~- 216 (894)
... ..+.. . . -...+.+. ..+.+.+.. .+..| +....+++.|+....... . +...+..
T Consensus 319 ~~r~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~l~~---~lgip-----~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~ 390 (578)
T PRK15490 319 RKRLFKPEYEPLYQALAVVPGVDFMSNNHCVTRHYAD---WLKLE-----AKHFQVVYNGVLPPSTEPSSEVPHKIWQQF 390 (578)
T ss_pred hhhHHHHHHHHhhhhceeEecchhhhccHHHHHHHHH---HhCCC-----HHHEEEEeCCcchhhcCccchhhHHHHHHh
Confidence 000 00000 0 0 00000000 000011100 00010 112234555554321111 1 1123332
Q ss_pred -hCCCCCCcEEEEEcCCCCCh---hhhHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHH
Q 002674 217 -LGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDF 276 (894)
Q Consensus 217 -lgl~~~~p~Vlvs~Gs~~~~---~~l~~~---Ll--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~l 276 (894)
.+++++. .++.+.|..... ..+++. +. .++++++++|.+... +.++|+++|+.++++++
T Consensus 391 ~~~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~ 469 (578)
T PRK15490 391 TQKTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYW 469 (578)
T ss_pred hhccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHH
Confidence 2333333 355666654332 223332 21 257888888876421 45789999998889999
Q ss_pred HhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCC
Q 002674 277 MAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (894)
Q Consensus 277 l~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~ 334 (894)
|+.+|+||..+ | .+++.|||++|+|+|+....+. .+.+.+...|..++..+.
T Consensus 470 LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~------~EiV~dG~nG~LVp~~D~ 525 (578)
T PRK15490 470 LQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGS------AECFIEGVSGFILDDAQT 525 (578)
T ss_pred HHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCc------HHHcccCCcEEEECCCCh
Confidence 99999999753 3 3689999999999999875443 344666677998887653
No 136
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.56 E-value=6e-06 Score=94.99 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=63.5
Q ss_pred hhHHhh--CCCCcEEEEeCCCCCCCCCCeEECCCCCC---HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCC
Q 002674 238 KLKEEY--LPSGWKCLVCGASDSQLPPNFIKLPKDAY---TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRD 308 (894)
Q Consensus 238 ~l~~~L--l~~~~~~vv~G~~~~~lp~nv~v~g~~~~---vp~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~ 308 (894)
.+++++ +.+++++++.|.+....+.++..+++..+ +.++|+.+|+||..+ | .++++|||++|+|+|+.+.+
T Consensus 260 ~li~A~~~l~~~~~L~ivG~g~~~~~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~g 339 (405)
T PRK10125 260 QLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSD 339 (405)
T ss_pred HHHHHHHhCCCCeEEEEEcCCCcccccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCC
Confidence 344443 23567888888765444567887887643 467889999999764 2 36899999999999999865
Q ss_pred CCCchHHHHHHHHHcCcEEEEccCCC
Q 002674 309 YFNEEPFLRNMLEFYQGGVEMIRRDL 334 (894)
Q Consensus 309 ~~~eq~~na~~l~~~G~g~~~~~~~~ 334 (894)
+..| +...+.|++++..|.
T Consensus 340 G~~E-------iv~~~~G~lv~~~d~ 358 (405)
T PRK10125 340 AARE-------VLQKSGGKTVSEEEV 358 (405)
T ss_pred ChHH-------hEeCCcEEEECCCCH
Confidence 5333 333457999988774
No 137
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.52 E-value=5.3e-05 Score=92.12 Aligned_cols=125 Identities=14% Similarity=0.024 Sum_probs=80.0
Q ss_pred HHHhCC--CCCCcEEEEEcCCCCCh---hhhHHhh-----CCCCcEEEEeCCCCC-----------------------CC
Q 002674 214 RKELGI--EDDVKLLILNFGGQPAG---WKLKEEY-----LPSGWKCLVCGASDS-----------------------QL 260 (894)
Q Consensus 214 r~~lgl--~~~~p~Vlvs~Gs~~~~---~~l~~~L-----l~~~~~~vv~G~~~~-----------------------~l 260 (894)
++.+|+ ++++| ++++.|..... ..+++++ +..++.++++|.+.. .+
T Consensus 539 ~~~~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL 617 (784)
T TIGR02470 539 DEHYGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQL 617 (784)
T ss_pred HHHhCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCC
Confidence 456665 34555 67778887653 2344433 234466777664310 03
Q ss_pred CCCeEECCCC---CCHHHHHh----hcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002674 261 PPNFIKLPKD---AYTPDFMA----ASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (894)
Q Consensus 261 p~nv~v~g~~---~~vp~ll~----~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~ 329 (894)
..+|+++|+. ...+++++ .+|+||..+ -..++.|||+||+|+|+...++. .+.+.....|..+
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~------~EiV~dg~tGfLV 691 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGP------LEIIQDGVSGFHI 691 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCH------HHHhcCCCcEEEe
Confidence 5678888864 23455554 357999764 23689999999999999875543 3446666679999
Q ss_pred ccCCCCcccHHHHHHHHH
Q 002674 330 IRRDLLTGHWKPYLERAI 347 (894)
Q Consensus 330 ~~~~~~~~~l~~~l~~ll 347 (894)
+..+. +.+.++|.+++
T Consensus 692 dp~D~--eaLA~aL~~ll 707 (784)
T TIGR02470 692 DPYHG--EEAAEKIVDFF 707 (784)
T ss_pred CCCCH--HHHHHHHHHHH
Confidence 87764 57888888776
No 138
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.50 E-value=1.7e-06 Score=92.65 Aligned_cols=114 Identities=16% Similarity=0.158 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHH-hCCCCC---CCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhc
Q 002674 610 AAYVAGTILVLMTE-LGVRFE---DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIV 685 (894)
Q Consensus 610 ~~yv~g~i~~~~~~-~g~~~~---~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~ 685 (894)
.|.+.-++..+.+. .+.... .|++|.+..+||+|+|||||||-.+|++.+++++++.+++++++.++|.+.
T Consensus 61 ~NLv~kA~~~l~~~~~~~~~~~~~~gv~I~i~K~IP~gaGLGggSSdAAA~L~aln~l~~~~ls~~eL~~lA~~l----- 135 (257)
T PRK04181 61 ENIIYKAYQELKNKGFSNELIEFFKKKAIEVEKNIPTGAGLGGGSSDAATFLLMLNEILNLKLSLEELAEIGSKV----- 135 (257)
T ss_pred CcHHHHHHHHHHHhccccccccCCCceEEEEEeCCCCcCcccccHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh-----
Confidence 35665555555442 332111 489999999999999999999999999999999999999999999999752
Q ss_pred CCCCChhhhHHhhcC-CCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 686 GAPCGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 686 G~~~G~mDq~as~~G-~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
| .|---+++| +. + +.. .-++..++++.+.. .+++++.++.-+|
T Consensus 136 G-----aDvPffl~~~~~--a-~~~-G~Ge~l~~l~~~~~-~~~lv~P~~~vsT 179 (257)
T PRK04181 136 G-----ADVAFFISGYKS--A-NVS-GIGEIVEEFEEEIL-NLEIFTPNIFCST 179 (257)
T ss_pred C-----CCccEEecCCce--E-EEE-eeCCeeEECCCCCC-eEEEECCCCCcCH
Confidence 4 376667777 42 2 222 22333355532222 3788888776655
No 139
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.50 E-value=1.5e-05 Score=90.92 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=89.3
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHhh---C--CCCcEEEEeCCCCC------------------CCCCCe
Q 002674 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY---L--PSGWKCLVCGASDS------------------QLPPNF 264 (894)
Q Consensus 211 ~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~L---l--~~~~~~vv~G~~~~------------------~lp~nv 264 (894)
...++.++++++. .++++.|..... ..+++++ . .++++++++|.+.. .+..++
T Consensus 181 ~~~~~~~~~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v 259 (380)
T PRK15484 181 PNLRQQLNISPDE-TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRC 259 (380)
T ss_pred HHHHHHhCCCCCC-eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcE
Confidence 4566777875554 567777877653 2244432 2 36788888885421 135678
Q ss_pred EECCCCC--CHHHHHhhcCEEEecCC----h-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE-ccCCCCc
Q 002674 265 IKLPKDA--YTPDFMAASDCMLGKIG----Y-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM-IRRDLLT 336 (894)
Q Consensus 265 ~v~g~~~--~vp~ll~~~d~~I~~~G----~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~-~~~~~~~ 336 (894)
.++|+.+ .++++|+.+|++|..+. + .++.|||++|+|+|+....+.. +.+++...|..+ +..+ +
T Consensus 260 ~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~------Eiv~~~~~G~~l~~~~d--~ 331 (380)
T PRK15484 260 IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGIT------EFVLEGITGYHLAEPMT--S 331 (380)
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcH------hhcccCCceEEEeCCCC--H
Confidence 8888864 57789999999997543 2 5788999999999998764433 335555567644 4444 5
Q ss_pred ccHHHHHHHHHhcC
Q 002674 337 GHWKPYLERAISLK 350 (894)
Q Consensus 337 ~~l~~~l~~ll~~~ 350 (894)
+.+.++|.++++++
T Consensus 332 ~~la~~I~~ll~d~ 345 (380)
T PRK15484 332 DSIISDINRTLADP 345 (380)
T ss_pred HHHHHHHHHHHcCH
Confidence 68999999999765
No 140
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.48 E-value=1.7e-05 Score=90.30 Aligned_cols=135 Identities=13% Similarity=0.098 Sum_probs=86.4
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHhh--CCCCcEEEEeCCCCC--C-----------CC---CCeEEC
Q 002674 209 SRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDS--Q-----------LP---PNFIKL 267 (894)
Q Consensus 209 ~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~L--l~~~~~~vv~G~~~~--~-----------lp---~nv~v~ 267 (894)
.....+..++++++++ ++++.|..... ..+++++ +.+++.++++|.+.. . +. .++..+
T Consensus 187 ~~~~~~~~~~~~~~~~-~i~~~Grl~~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 265 (388)
T TIGR02149 187 DGNVVLDRYGIDRSRP-YILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWI 265 (388)
T ss_pred chHHHHHHhCCCCCce-EEEEEcccccccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEe
Confidence 3455677888765554 67777877653 2344432 234566666543221 0 11 246554
Q ss_pred -CCC--CCHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCc----
Q 002674 268 -PKD--AYTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT---- 336 (894)
Q Consensus 268 -g~~--~~vp~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~---- 336 (894)
++. +.++++|++||++|..+ ...+++||+++|+|+|+.+.++ +.+.++..+.|..++..+...
T Consensus 266 ~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~------~~e~i~~~~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 266 NKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGG------IPEVVVDGETGFLVPPDNSDADGFQ 339 (388)
T ss_pred cCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCC------HHHHhhCCCceEEcCCCCCcccchH
Confidence 333 34678999999999753 2367899999999999987543 344566667798888766422
Q ss_pred ccHHHHHHHHHhcC
Q 002674 337 GHWKPYLERAISLK 350 (894)
Q Consensus 337 ~~l~~~l~~ll~~~ 350 (894)
+.+.++|.++++++
T Consensus 340 ~~l~~~i~~l~~~~ 353 (388)
T TIGR02149 340 AELAKAINILLADP 353 (388)
T ss_pred HHHHHHHHHHHhCH
Confidence 57888888888665
No 141
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.43 E-value=2.1e-06 Score=95.92 Aligned_cols=118 Identities=13% Similarity=0.040 Sum_probs=76.9
Q ss_pred CcEEEEEcCCCCChh-h----hHH---hhCCCCcEEEEeCCCCCC-----CC--CCeEECCCCCCHHHHHhhcCEEEecC
Q 002674 223 VKLLILNFGGQPAGW-K----LKE---EYLPSGWKCLVCGASDSQ-----LP--PNFIKLPKDAYTPDFMAASDCMLGKI 287 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~~-~----l~~---~Ll~~~~~~vv~G~~~~~-----lp--~nv~v~g~~~~vp~ll~~~d~~I~~~ 287 (894)
.++|.+..||.+... . +.+ .+.....++++++....+ +. ..+.+. +...++|++||++|+.+
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i~~~~~~~~~~~~~---~~~~~~m~~aDlal~~S 243 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKGKDLKEIYGDISEFEIS---YDTHKALLEAEFAFICS 243 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHHHHHHhcCCCcEEe---ccHHHHHHhhhHHHhcC
Confidence 478889999887641 1 112 222222456666654321 11 133333 35678999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH---HcCcEEEE-------------ccCCCCcccHHHHHHH
Q 002674 288 GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEM-------------IRRDLLTGHWKPYLER 345 (894)
Q Consensus 288 G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~---~~G~g~~~-------------~~~~~~~~~l~~~l~~ 345 (894)
|..|+ |++.+|+|+|+ ++....-|..|++++. ..|.+-.+ -+++.+++.+.+.+.+
T Consensus 244 GT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~ 315 (347)
T PRK14089 244 GTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE 315 (347)
T ss_pred cHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH
Confidence 97777 99999999998 4445567889999998 44444333 3355666777766655
No 142
>PLN02316 synthase/transferase
Probab=98.43 E-value=9.1e-05 Score=92.29 Aligned_cols=137 Identities=16% Similarity=0.060 Sum_probs=86.1
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--hh-hHHh---hCCCCcEEEEeCCCCC-----C-------C----CCCeEECC
Q 002674 211 KEVRKELGIEDDVKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS-----Q-------L----PPNFIKLP 268 (894)
Q Consensus 211 ~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~~-l~~~---Ll~~~~~~vv~G~~~~-----~-------l----p~nv~v~g 268 (894)
..+++.+|++.+...+++..|.+... .. ++++ ++..+.+++++|.+.. . + +.+|.+.+
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g 906 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCL 906 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEe
Confidence 45778899874333467778877652 23 3332 3345678888886531 0 1 45677654
Q ss_pred CCCC-HH-HHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH-------HHHcCcEEEEccCCCC
Q 002674 269 KDAY-TP-DFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM-------LEFYQGGVEMIRRDLL 335 (894)
Q Consensus 269 ~~~~-vp-~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~-------l~~~G~g~~~~~~~~~ 335 (894)
..+. +. .+++.||+|+..+ =..+.+|||++|+|.|+...++..|....... -...+.|.+++..+
T Consensus 907 ~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d-- 984 (1036)
T PLN02316 907 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD-- 984 (1036)
T ss_pred cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC--
Confidence 4333 32 6899999999753 12789999999999998876655553211100 00125688887655
Q ss_pred cccHHHHHHHHHhc
Q 002674 336 TGHWKPYLERAISL 349 (894)
Q Consensus 336 ~~~l~~~l~~ll~~ 349 (894)
+..+..+|.+++..
T Consensus 985 ~~aLa~AL~raL~~ 998 (1036)
T PLN02316 985 AAGVDYALNRAISA 998 (1036)
T ss_pred HHHHHHHHHHHHhh
Confidence 45788888888864
No 143
>PRK14099 glycogen synthase; Provisional
Probab=98.42 E-value=3e-05 Score=91.32 Aligned_cols=133 Identities=20% Similarity=0.175 Sum_probs=83.2
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCCh--hh-hHHh---hCCCCcEEEEeCCCCC---C--------CCCCe-EECCCCC
Q 002674 211 KEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS---Q--------LPPNF-IKLPKDA 271 (894)
Q Consensus 211 ~e~r~~lgl~~~-~p~Vlvs~Gs~~~~--~~-l~~~---Ll~~~~~~vv~G~~~~---~--------lp~nv-~v~g~~~ 271 (894)
..+++.+|++.+ ...++.+.|..... .+ ++++ +...++++++.|.+.. . .+.++ .++||.+
T Consensus 281 ~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~ 360 (485)
T PRK14099 281 AALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDE 360 (485)
T ss_pred HHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCH
Confidence 467788898643 23456667776652 22 3332 3345678888887642 1 35565 5788877
Q ss_pred CHHHHH-hhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHH-HHHH--cCcEEEEccCCCCcccHHHHH
Q 002674 272 YTPDFM-AASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRN-MLEF--YQGGVEMIRRDLLTGHWKPYL 343 (894)
Q Consensus 272 ~vp~ll-~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~-~l~~--~G~g~~~~~~~~~~~~l~~~l 343 (894)
.++.++ +.||+|+..+ | ..+.+|||++|+|.|+....+..|...... ..+. .+.|+.++..+ ++.+.++|
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d--~~~La~ai 438 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT--ADALAAAL 438 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC--HHHHHHHH
Confidence 778776 5799999753 2 268899999998777766545444311110 0011 15688888766 45788888
Q ss_pred HH
Q 002674 344 ER 345 (894)
Q Consensus 344 ~~ 345 (894)
.+
T Consensus 439 ~~ 440 (485)
T PRK14099 439 RK 440 (485)
T ss_pred HH
Confidence 86
No 144
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.42 E-value=1.2e-05 Score=90.34 Aligned_cols=292 Identities=19% Similarity=0.218 Sum_probs=154.3
Q ss_pred ecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccc-cCHHHHHHHHHHHh
Q 002674 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETA 99 (894)
Q Consensus 21 ~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~-~d~~~~l~~~~~~~ 99 (894)
.+.|.-.|-+ -+..|+++|+++.-++.|.+-+.+.+....++ . .++.. .+. +-....+.++..+
T Consensus 3 i~AGE~SGD~-~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~-------~-l~d~~-----~lsvmG~~Evl~~l~~~- 67 (373)
T PF02684_consen 3 ISAGEASGDL-HGARLIRALKARDPDIEFYGVGGPRMQAAGVE-------S-LFDME-----ELSVMGFVEVLKKLPKL- 67 (373)
T ss_pred EEeeCccHHH-HHHHHHHHHHhhCCCcEEEEEechHHHhCCCc-------e-ecchH-----HhhhccHHHHHHHHHHH-
Confidence 3455555533 35678899999988888875443222211111 0 01100 011 1111223333332
Q ss_pred hcchHHhHHHHHHHHhcCCCcEEE-ECCchhHHHHHH---HhCCc--EEEE-ecCc--hhHHHHHHHhhhccchHHHHHH
Q 002674 100 VAPRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAA---DAGIR--SVCV-TNFS--WDFIYAEYVMAAGHHHRSIVWQ 170 (894)
Q Consensus 100 ~~~~~~ll~~~~~~L~~~~PDlVV-~D~~~~a~~aA~---~lgIP--~V~i-sn~~--~~~~~~~~~~~~~~~~~~i~~~ 170 (894)
.....+..+.+++.+||+|| .|++-..+.+|+ ..|+| +|.+ +... |... + +..
T Consensus 68 ----~~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvWAWr~~-R-------------~~~ 129 (373)
T PF02684_consen 68 ----KRLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVWAWRPG-R-------------AKK 129 (373)
T ss_pred ----HHHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCceeeeCcc-H-------------HHH
Confidence 23446678889999999999 688666666654 45777 6654 4333 3311 0 011
Q ss_pred HHhhccccceeeecCCCCCC---CCC-CceeecCcccc-cCccChHHHHHHhCCCCCCcEEEEEcCCCCChh-----hhH
Q 002674 171 IAEDYSHCEFLIRLPGYCPM---PAF-RDVIDVPLVVR-RLHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KLK 240 (894)
Q Consensus 171 l~~~y~~~~~ll~~p~~~~~---p~~-~~v~~vp~~~~-~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~-----~l~ 240 (894)
+.+..+. .+..+|+.... -.. ..+++-|.... .+...+.+.++.+ +++++++|.+.-||..... .++
T Consensus 130 i~~~~D~--ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 130 IKKYVDH--LLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred HHHHHhh--eeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 1111111 11223332110 000 12344455433 2334456667777 8889999999999876531 122
Q ss_pred Hh---hC--CCCcEEEEeCCCCC--C--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEE
Q 002674 241 EE---YL--PSGWKCLVCGASDS--Q--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFV 305 (894)
Q Consensus 241 ~~---Ll--~~~~~~vv~G~~~~--~--------lp~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~i 305 (894)
+. +. .++.++++...... + .+.++.+.-......++|++||+.++.+| +.+.|++.+|+|+|++
T Consensus 207 ~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~al~~SG-TaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADAALAASG-TATLEAALLGVPMVVA 285 (373)
T ss_pred HHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcchhhcCC-HHHHHHHHhCCCEEEE
Confidence 21 22 25677776533221 1 12333322112344689999999999999 8999999999999998
Q ss_pred eCCCCCchHHHHHHHHHcCcEEE------------EccCCCCcccHHHHHHHHHhcC
Q 002674 306 RRDYFNEEPFLRNMLEFYQGGVE------------MIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 306 p~~~~~eq~~na~~l~~~G~g~~------------~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
-... .=....++++.+..+--. +-+++.+++.+..++.+++.++
T Consensus 286 Yk~~-~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~ 341 (373)
T PF02684_consen 286 YKVS-PLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP 341 (373)
T ss_pred EcCc-HHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH
Confidence 6432 223356777766544211 1123445556666666666544
No 145
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.40 E-value=5.4e-05 Score=84.82 Aligned_cols=125 Identities=20% Similarity=0.180 Sum_probs=79.6
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHhh--CCCCcEEEEeCCCCC------------CCCCCeEECCCCC--C
Q 002674 212 EVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDS------------QLPPNFIKLPKDA--Y 272 (894)
Q Consensus 212 e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~L--l~~~~~~vv~G~~~~------------~lp~nv~v~g~~~--~ 272 (894)
+.++.++..++ + .+++.|+.... ..+++++ +..+++++++|.... .+.++|++.|+.. .
T Consensus 183 ~~~~~~~~~~~-~-~i~~~G~~~~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~ 260 (363)
T cd04955 183 EILKKYGLEPG-R-YYLLVGRIVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQE 260 (363)
T ss_pred hhHHhcCCCCC-c-EEEEEecccccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHH
Confidence 34455555433 3 35677877653 2233432 234678888887521 1357899998874 3
Q ss_pred HHHHHhhcCEEEecCCh-----hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHH
Q 002674 273 TPDFMAASDCMLGKIGY-----GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (894)
Q Consensus 273 vp~ll~~~d~~I~~~G~-----~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll 347 (894)
+.+++..+|+++.++-. +++.|||++|+|+|+...+...|. +.. .|..++..+ .+.+++.+++
T Consensus 261 ~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~------~~~--~g~~~~~~~----~l~~~i~~l~ 328 (363)
T cd04955 261 LLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREV------LGD--KAIYFKVGD----DLASLLEELE 328 (363)
T ss_pred HHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcccee------ecC--CeeEecCch----HHHHHHHHHH
Confidence 45788899999875422 579999999999999876554443 222 344454333 2788999998
Q ss_pred hcC
Q 002674 348 SLK 350 (894)
Q Consensus 348 ~~~ 350 (894)
+++
T Consensus 329 ~~~ 331 (363)
T cd04955 329 ADP 331 (363)
T ss_pred hCH
Confidence 765
No 146
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.39 E-value=4.7e-06 Score=79.04 Aligned_cols=111 Identities=15% Similarity=0.136 Sum_probs=81.5
Q ss_pred cEEEEEcCCCCCh--------hhhHHhhCCCCc-EE-EEeCCCCCC-------C--CCCeEE--CCCCCCHHHHHhhcCE
Q 002674 224 KLLILNFGGQPAG--------WKLKEEYLPSGW-KC-LVCGASDSQ-------L--PPNFIK--LPKDAYTPDFMAASDC 282 (894)
Q Consensus 224 p~Vlvs~Gs~~~~--------~~l~~~Ll~~~~-~~-vv~G~~~~~-------l--p~nv~v--~g~~~~vp~ll~~~d~ 282 (894)
..++|+.|+.... .+++++|..-++ ++ +-.|++..- . ...+.+ ..|.+.+.+.++.||+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl 83 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL 83 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE
Confidence 4789999988764 123444544454 33 335766321 1 233444 4455777889999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCC--CCCchHHHHHHHHHcCcEEEEccCCC
Q 002674 283 MLGKIGYGTVSEALAYKLPFVFVRRD--YFNEEPFLRNMLEFYQGGVEMIRRDL 334 (894)
Q Consensus 283 ~I~~~G~~t~~Eal~~G~P~l~ip~~--~~~eq~~na~~l~~~G~g~~~~~~~~ 334 (894)
+|+|+|.||++|.+..|+|.|+++.. ..++|...|+.|++.|+-+.....++
T Consensus 84 VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~L 137 (170)
T KOG3349|consen 84 VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPSTL 137 (170)
T ss_pred EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccch
Confidence 99999999999999999999999865 34678899999999999988887665
No 147
>PLN02939 transferase, transferring glycosyl groups
Probab=98.34 E-value=0.00028 Score=86.66 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=88.5
Q ss_pred hHHHHHHhCCCCC--CcEEEEEcCCCCCh--hh-hHHh---hCCCCcEEEEeCCCCC-----C---------CCCCeEEC
Q 002674 210 RKEVRKELGIEDD--VKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS-----Q---------LPPNFIKL 267 (894)
Q Consensus 210 ~~e~r~~lgl~~~--~p~Vlvs~Gs~~~~--~~-l~~~---Ll~~~~~~vv~G~~~~-----~---------lp~nv~v~ 267 (894)
+..+++.+|++++ ...++++.|..... .. ++++ +...+.+++++|.+.. . +.++|.++
T Consensus 763 K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~Fl 842 (977)
T PLN02939 763 KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLI 842 (977)
T ss_pred hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEE
Confidence 4568889998742 33467788887653 22 2332 3345678888887631 1 24578887
Q ss_pred CCCCCH--HHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHH--HHHH-HHcCcEEEEccCCCCccc
Q 002674 268 PKDAYT--PDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFL--RNML-EFYQGGVEMIRRDLLTGH 338 (894)
Q Consensus 268 g~~~~v--p~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~n--a~~l-~~~G~g~~~~~~~~~~~~ 338 (894)
++.+.. +.+++.+|+||..+ -..+.+|||++|+|.|+...++..|...+ -..+ ...+.|..+...+ ++.
T Consensus 843 G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D--~ea 920 (977)
T PLN02939 843 LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPD--EQG 920 (977)
T ss_pred eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCC--HHH
Confidence 766543 47999999999753 23789999999999998876655443111 0111 1235688887655 357
Q ss_pred HHHHHHHHHh
Q 002674 339 WKPYLERAIS 348 (894)
Q Consensus 339 l~~~l~~ll~ 348 (894)
+..+|.+++.
T Consensus 921 La~AL~rAL~ 930 (977)
T PLN02939 921 LNSALERAFN 930 (977)
T ss_pred HHHHHHHHHH
Confidence 7778877764
No 148
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.33 E-value=5.8e-05 Score=93.73 Aligned_cols=83 Identities=17% Similarity=0.134 Sum_probs=62.9
Q ss_pred CCCCeEECCCC--CCHHHHHhhc----CEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002674 260 LPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (894)
Q Consensus 260 lp~nv~v~g~~--~~vp~ll~~~----d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~ 329 (894)
+..+|.+.|+. +.++++|+.| |+||..+ |+ .++.|||++|+|+|+....+..| .+.....|+++
T Consensus 546 L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~E------II~~g~nGlLV 619 (1050)
T TIGR02468 546 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRVLDNGLLV 619 (1050)
T ss_pred CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHH------HhccCCcEEEE
Confidence 35678888875 4678899876 6999764 32 68999999999999988654433 34455678888
Q ss_pred ccCCCCcccHHHHHHHHHhcC
Q 002674 330 IRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 330 ~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+..+. +.|.++|.++++++
T Consensus 620 dP~D~--eaLA~AL~~LL~Dp 638 (1050)
T TIGR02468 620 DPHDQ--QAIADALLKLVADK 638 (1050)
T ss_pred CCCCH--HHHHHHHHHHhhCH
Confidence 87664 58999999999776
No 149
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.32 E-value=1.6e-05 Score=93.83 Aligned_cols=222 Identities=18% Similarity=0.191 Sum_probs=124.4
Q ss_pred HHHHHHHhcCCCcEEEECC-ch---h--HHHHHHHhCCcEEEE--ecCchhHHHHHHHhhhccchHHH----H-HHHHhh
Q 002674 108 KDEVEWLNSIKADLVVSDV-VP---V--ACRAAADAGIRSVCV--TNFSWDFIYAEYVMAAGHHHRSI----V-WQIAED 174 (894)
Q Consensus 108 ~~~~~~L~~~~PDlVV~D~-~~---~--a~~aA~~lgIP~V~i--sn~~~~~~~~~~~~~~~~~~~~i----~-~~l~~~ 174 (894)
.+..+.|.+++||+|+... .. . |..+|++++ |+|.+ |++. . |-.+... + ....+ + +++...
T Consensus 424 gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~--e-Yl~~y~~-g-~L~~~llk~l~~~v~r~ 497 (794)
T PLN02501 424 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYL--E-YIKREKN-G-ALQAFFVKHINNWVTRA 497 (794)
T ss_pred HHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcH--H-HHhHhcc-h-hHHHHHHHHHHHHHHHh
Confidence 3557788999999999764 32 2 556899999 87654 5553 1 2111110 0 11121 1 123333
Q ss_pred ccccceeeecCCCCC-CCCCCceee--cCcccccCccC-hHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHHhh---C
Q 002674 175 YSHCEFLIRLPGYCP-MPAFRDVID--VPLVVRRLHKS-RKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY---L 244 (894)
Q Consensus 175 y~~~~~ll~~p~~~~-~p~~~~v~~--vp~~~~~~~~~-~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~~L---l 244 (894)
| |+.++.++.... .+. .++. .|+......+. +...+..++++...+ .+++.|.+... ..+++++ .
T Consensus 498 h--cD~VIaPS~atq~L~~--~vI~nVnGVDte~F~P~~r~~~~r~lgi~~~~k-giLfVGRLa~EKGld~LLeAla~L~ 572 (794)
T PLN02501 498 Y--CHKVLRLSAATQDLPK--SVICNVHGVNPKFLKIGEKVAEERELGQQAFSK-GAYFLGKMVWAKGYRELIDLLAKHK 572 (794)
T ss_pred h--CCEEEcCCHHHHHhcc--cceeecccccccccCCcchhHHHHhcCCccccC-ceEEEEcccccCCHHHHHHHHHHHH
Confidence 3 666554321110 111 1222 25543322221 222334566543333 34556776653 2333432 1
Q ss_pred --CCCcEEEEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCC
Q 002674 245 --PSGWKCLVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDY 309 (894)
Q Consensus 245 --~~~~~~vv~G~~~~~---------lp~nv~v~g~~~~vp~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~ 309 (894)
.++++++++|.+... +.-++.++++.++.+++|+.+|+||..+ | .+++.|||++|+|+|+...++
T Consensus 573 ~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG 652 (794)
T PLN02501 573 NELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPS 652 (794)
T ss_pred hhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCC
Confidence 247888889877531 2335778888888888999999999754 2 368999999999999988653
Q ss_pred CCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCC
Q 002674 310 FNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (894)
Q Consensus 310 ~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~ 351 (894)
. +. +...+.|... .+ .+.+.+++.+++.+++
T Consensus 653 ~-e~------V~~g~nGll~--~D--~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 653 N-EF------FRSFPNCLTY--KT--SEDFVAKVKEALANEP 683 (794)
T ss_pred C-ce------EeecCCeEec--CC--HHHHHHHHHHHHhCch
Confidence 2 21 2222334433 23 4688889999997763
No 150
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.32 E-value=3.9e-05 Score=90.25 Aligned_cols=138 Identities=20% Similarity=0.120 Sum_probs=86.6
Q ss_pred HHHHHHhCCC-CCCcEEEEEcCCCCCh--hh-hHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEEC-CCCC
Q 002674 211 KEVRKELGIE-DDVKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKL-PKDA 271 (894)
Q Consensus 211 ~e~r~~lgl~-~~~p~Vlvs~Gs~~~~--~~-l~~---~Ll~~~~~~vv~G~~~~~-----------lp~nv~v~-g~~~ 271 (894)
..+++.++++ .+...++++.|..... .+ +++ .+...++++++.|.+... .+.|+.++ ++..
T Consensus 282 ~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~ 361 (476)
T cd03791 282 AALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDE 361 (476)
T ss_pred HHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCH
Confidence 4567888875 2333467788887653 22 333 233345788888866421 35777654 4443
Q ss_pred C-HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 272 Y-TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 272 ~-vp~ll~~~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
. ++.+++.||+++..+ -..+.+|||++|+|+|+....+..|...+...-.+.|.|+.++..+ ++.+.++|.++
T Consensus 362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~--~~~l~~~i~~~ 439 (476)
T cd03791 362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN--ADALLAALRRA 439 (476)
T ss_pred HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--HHHHHHHHHHH
Confidence 2 347889999999653 2257899999999999887666555311110011234788888766 45788888888
Q ss_pred HhcC
Q 002674 347 ISLK 350 (894)
Q Consensus 347 l~~~ 350 (894)
++..
T Consensus 440 l~~~ 443 (476)
T cd03791 440 LALY 443 (476)
T ss_pred HHHH
Confidence 7543
No 151
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.32 E-value=1.6e-05 Score=82.23 Aligned_cols=52 Identities=23% Similarity=0.039 Sum_probs=39.2
Q ss_pred CCCeEECCCC---CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCc
Q 002674 261 PPNFIKLPKD---AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNE 312 (894)
Q Consensus 261 p~nv~v~g~~---~~vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~e 312 (894)
..|+.++++. +.+..+++.||+++.... .++++|||++|+|+|+.+.+...|
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e 218 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPE 218 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcce
Confidence 4567767663 233456667999999875 589999999999999988665544
No 152
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism]
Probab=98.31 E-value=6.4e-06 Score=91.00 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=76.3
Q ss_pred CCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHH----HHHHHHHHHhhcCCCCChhhhHHhhcCCCCeE
Q 002674 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDL----ALLCQKVENHIVGAPCGVMDQMASACGEANKL 705 (894)
Q Consensus 630 ~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~l----a~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~ 705 (894)
.||+|..+|++|.|+|||.|+-+.+-...|+..+.|.....+.+ .....+.|.. .-+.+|++||.-.+|-|.-+-
T Consensus 690 ~GfeihT~SdLPHGSGLGTSSIlA~TaLaAi~~aagr~~gTeaLiHailHtvlrlEQi-lTTGGGWQDQ~G~im~GIK~g 768 (948)
T KOG4644|consen 690 CGFEIHTSSDLPHGSGLGTSSILACTALAAICAAAGRADGTEALIHAILHTVLRLEQI-LTTGGGWQDQCGAIMEGIKKG 768 (948)
T ss_pred CceEeeccccCCCCCCcchHHHHHHHHHHHHHHhhccccchhHhHHHHHHHHHHHHHH-hhcCCchhhhccchhhhhhhc
Confidence 69999999999999999999999998888999888876554443 3444557864 578899999998888774321
Q ss_pred EEEEec---CCce-eEEeecCC------CeEEEEEeCCCCc
Q 002674 706 LAMVCQ---PAEL-LGVVEIPS------HIRFWGIDSGIRH 736 (894)
Q Consensus 706 ~~~~~~---~~~~-~~~v~~p~------~~~~vv~~sgv~~ 736 (894)
.|+ +..+ .+.+.+|+ +-++++++||..|
T Consensus 769 ---r~rael~~~ie~eeiTipe~f~ekL~dhLLLVYTGKTR 806 (948)
T KOG4644|consen 769 ---RCRAELNHGIEHEEITIPEEFREKLEDHLLLVYTGKTR 806 (948)
T ss_pred ---cchhhccCCceeeeecCCHHHHHHHhhcEEEEEeCchH
Confidence 222 2221 25667774 4578999999876
No 153
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.30 E-value=2.8e-05 Score=86.74 Aligned_cols=117 Identities=15% Similarity=0.018 Sum_probs=78.8
Q ss_pred cEEEEEcCCCCCh---hhhHHh---hCC--CCcEEEEeCCCCCC------------CCCCeEECCCC--CCHHHHHhhcC
Q 002674 224 KLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ------------LPPNFIKLPKD--AYTPDFMAASD 281 (894)
Q Consensus 224 p~Vlvs~Gs~~~~---~~l~~~---Ll~--~~~~~vv~G~~~~~------------lp~nv~v~g~~--~~vp~ll~~~d 281 (894)
+.++++.|+.... ..+++. +.. +++.++++|..... +++++++.|+. +.+.++|+.+|
T Consensus 195 ~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 274 (365)
T cd03809 195 RPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGAR 274 (365)
T ss_pred CCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhh
Confidence 3467788887652 223332 222 24677788764321 46789999987 45678999999
Q ss_pred EEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 282 CMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 282 ~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+++..+ ..++++|||++|+|+|+...+...|. +. ..|..+...+ .+.+.++|.+++.++
T Consensus 275 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~------~~--~~~~~~~~~~--~~~~~~~i~~l~~~~ 337 (365)
T cd03809 275 AFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEV------AG--DAALYFDPLD--PEALAAAIERLLEDP 337 (365)
T ss_pred hhcccchhccCCCCHHHHhcCCCcEEecCCCCccce------ec--CceeeeCCCC--HHHHHHHHHHHhcCH
Confidence 998652 23679999999999999876555453 22 2455666554 468899999988665
No 154
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.30 E-value=2.8e-05 Score=89.28 Aligned_cols=116 Identities=15% Similarity=0.108 Sum_probs=79.4
Q ss_pred EEEEEcCCCCCh--hh-h---HH----hhC--CCCcEEEEeCCCCCC------CCCCeEECCCCCCHHHHHhhcCEEEec
Q 002674 225 LLILNFGGQPAG--WK-L---KE----EYL--PSGWKCLVCGASDSQ------LPPNFIKLPKDAYTPDFMAASDCMLGK 286 (894)
Q Consensus 225 ~Vlvs~Gs~~~~--~~-l---~~----~Ll--~~~~~~vv~G~~~~~------lp~nv~v~g~~~~vp~ll~~~d~~I~~ 286 (894)
.++++.|+.... .+ + .. .+. .++++++++|.+... ..++|++.|++++++.+|+.+|++|..
T Consensus 225 ~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~P 304 (397)
T TIGR03087 225 RVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPSPAVRALAALPGVTVTGSVADVRPYLAHAAVAVAP 304 (397)
T ss_pred cEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCChHHHHHhccCCCeEEeeecCCHHHHHHhCCEEEec
Confidence 466778887652 11 1 11 121 267888888876532 357899999998899999999999853
Q ss_pred ----CCh-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 287 ----IGY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 287 ----~G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
.|. +.+.|||++|+|+|+.+... +. .....|.|+.+. .+ ++.+.++|.++++++
T Consensus 305 s~~~eG~~~~~lEAma~G~PVV~t~~~~--~~-----i~~~~~~g~lv~-~~--~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 305 LRIARGIQNKVLEAMAMAKPVVASPEAA--EG-----IDALPGAELLVA-AD--PADFAAAILALLANP 363 (397)
T ss_pred ccccCCcccHHHHHHHcCCCEEecCccc--cc-----ccccCCcceEeC-CC--HHHHHHHHHHHHcCH
Confidence 243 36999999999999987421 21 012346677775 33 578999999998765
No 155
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.28 E-value=9.5e-05 Score=81.60 Aligned_cols=290 Identities=21% Similarity=0.212 Sum_probs=158.7
Q ss_pred ecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccc-cCHHHHHHHHHHHh
Q 002674 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETA 99 (894)
Q Consensus 21 ~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~-~d~~~~l~~~~~~~ 99 (894)
.+.|.-.|-+- ...|.++|+++--+|.|++-+.+.+.....+ . -++.. .+. +-....+.++..+.
T Consensus 6 i~AGE~SGDll-Ga~LikaLk~~~~~~efvGvgG~~m~aeG~~-------s-l~~~~-----elsvmGf~EVL~~lp~ll 71 (381)
T COG0763 6 LSAGEASGDLL-GAGLIKALKARYPDVEFVGVGGEKMEAEGLE-------S-LFDME-----ELSVMGFVEVLGRLPRLL 71 (381)
T ss_pred EEecccchhhH-HHHHHHHHHhhCCCeEEEEeccHHHHhccCc-------c-ccCHH-----HHHHhhHHHHHHHHHHHH
Confidence 35565555443 4578899988855888886543222111111 0 00100 000 11111222222211
Q ss_pred hcchHHhHHHHHHHHhcCCCcEEE-ECCchhHHHHHH---HhC--CcEEEE-ec--CchhHHHHHHHhhhccchHHHHHH
Q 002674 100 VAPRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAA---DAG--IRSVCV-TN--FSWDFIYAEYVMAAGHHHRSIVWQ 170 (894)
Q Consensus 100 ~~~~~~ll~~~~~~L~~~~PDlVV-~D~~~~a~~aA~---~lg--IP~V~i-sn--~~~~~~~~~~~~~~~~~~~~i~~~ 170 (894)
...++..+.+...+||++| .|++-....+|+ ..| +|+|.+ +. +.|..- + +..
T Consensus 72 -----k~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~-R-------------a~~ 132 (381)
T COG0763 72 -----KIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPK-R-------------AVK 132 (381)
T ss_pred -----HHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeechh-h-------------HHH
Confidence 2335556777889999999 587655555554 445 998865 33 334321 1 001
Q ss_pred HHhhccccceee-ecCCCCCC-CCC-Cceeec--Cccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCChh-----hh
Q 002674 171 IAEDYSHCEFLI-RLPGYCPM-PAF-RDVIDV--PLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KL 239 (894)
Q Consensus 171 l~~~y~~~~~ll-~~p~~~~~-p~~-~~v~~v--p~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~-----~l 239 (894)
+... +|.++ .+|+.... ..+ ..++.+ |..... ...+++.+|+.++++.+++++.+.-||..... .+
T Consensus 133 i~~~---~D~lLailPFE~~~y~k~g~~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 133 IAKY---VDHLLAILPFEPAFYDKFGLPCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred HHHH---hhHeeeecCCCHHHHHhcCCCeEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 1111 22222 23433100 000 112333 333332 34567889999999999999999999987641 12
Q ss_pred HH---hhC--CCCcEEEEeCCCCCC-------C--C---CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcE
Q 002674 240 KE---EYL--PSGWKCLVCGASDSQ-------L--P---PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPF 302 (894)
Q Consensus 240 ~~---~Ll--~~~~~~vv~G~~~~~-------l--p---~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~ 302 (894)
.+ .+. .++.+++++-.+... + + .++.+.+ ..-.+.|++||+.+..+| +.+.|++.+|+||
T Consensus 210 ~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aSG-T~tLE~aL~g~P~ 286 (381)
T COG0763 210 VQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAASG-TATLEAALAGTPM 286 (381)
T ss_pred HHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecC--chHHHHHHHhhHHHHhcc-HHHHHHHHhCCCE
Confidence 22 221 267788876433321 1 1 2333332 233479999999999999 8899999999999
Q ss_pred EEEeCCCCCchHHHHHHHHHcCcEEE------------EccCCCCcccHHHHHHHHHhcC
Q 002674 303 VFVRRDYFNEEPFLRNMLEFYQGGVE------------MIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 303 l~ip~~~~~eq~~na~~l~~~G~g~~------------~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
|+.-....-+ ...++++.+..+.-. +-.++.+++.+..++..++.+.
T Consensus 287 Vv~Yk~~~it-~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 287 VVAYKVKPIT-YFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred EEEEeccHHH-HHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcCh
Confidence 9886543222 245566655543211 1124566788888998888776
No 156
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.27 E-value=0.00019 Score=81.44 Aligned_cols=213 Identities=15% Similarity=0.118 Sum_probs=113.8
Q ss_pred HHHHHHHHhcCCCcEEEECC----chhHHHHHHHhCCcEEEEec--Cchh---HHHHHHHhhhccchHHHHHHHHhhc-c
Q 002674 107 LKDEVEWLNSIKADLVVSDV----VPVACRAAADAGIRSVCVTN--FSWD---FIYAEYVMAAGHHHRSIVWQIAEDY-S 176 (894)
Q Consensus 107 l~~~~~~L~~~~PDlVV~D~----~~~a~~aA~~lgIP~V~isn--~~~~---~~~~~~~~~~~~~~~~i~~~l~~~y-~ 176 (894)
+....+++++.+||+|++.. ...+.++|..++||++.+.. .+++ ...+. +.+++...+ .
T Consensus 82 ~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~~~eE~~r~-----------~i~~la~l~f~ 150 (365)
T TIGR03568 82 IIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEGAIDESIRH-----------AITKLSHLHFV 150 (365)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCCCchHHHHH-----------HHHHHHhhccC
Confidence 45567788999999999653 44778899999999997622 2221 11111 111111100 0
Q ss_pred c----cceeeecCCCCCCCCCCce--eecCcccc---cCccChHHHHHHhCCCCCCcEEEEEcCCCC--C---hh---hh
Q 002674 177 H----CEFLIRLPGYCPMPAFRDV--IDVPLVVR---RLHKSRKEVRKELGIEDDVKLLILNFGGQP--A---GW---KL 239 (894)
Q Consensus 177 ~----~~~ll~~p~~~~~p~~~~v--~~vp~~~~---~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~--~---~~---~l 239 (894)
. .+.++.. ..+. .++ ++.+.+.. .....++++.+++++++++++|++++-... . .. .+
T Consensus 151 ~t~~~~~~L~~e----g~~~-~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~l 225 (365)
T TIGR03568 151 ATEEYRQRVIQM----GEDP-DRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKEL 225 (365)
T ss_pred CCHHHHHHHHHc----CCCC-CcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHH
Confidence 0 0001000 0011 122 33333221 112244667788888656678888874332 1 11 23
Q ss_pred HHhhCC--CCcEEEEe-C-CCCCC--------C--CCCeEECCCCCCH--HHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 002674 240 KEEYLP--SGWKCLVC-G-ASDSQ--------L--PPNFIKLPKDAYT--PDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (894)
Q Consensus 240 ~~~Ll~--~~~~~vv~-G-~~~~~--------l--p~nv~v~g~~~~v--p~ll~~~d~~I~~~G~~t~~Eal~~G~P~l 303 (894)
.+.+.. ..+.++.. + +.... . .+|+.+++..++. ..+|+.|+++||.++.+. .||.++|+|+|
T Consensus 226 i~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSggi-~EA~~lg~Pvv 304 (365)
T TIGR03568 226 LKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGI-IEAPSFGVPTI 304 (365)
T ss_pred HHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChhHH-HhhhhcCCCEE
Confidence 333322 23433332 2 21111 1 4678888765433 368889999999886444 89999999999
Q ss_pred EEeCCCCCchHHHHHHHHHcCcEEE-EccCCCCcccHHHHHHHHHh
Q 002674 304 FVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAIS 348 (894)
Q Consensus 304 ~ip~~~~~eq~~na~~l~~~G~g~~-~~~~~~~~~~l~~~l~~ll~ 348 (894)
.+. .-+| ..+.|..+. +.. .++++.+++.++++
T Consensus 305 ~l~--~R~e-------~~~~g~nvl~vg~---~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 305 NIG--TRQK-------GRLRADSVIDVDP---DKEEIVKAIEKLLD 338 (365)
T ss_pred eec--CCch-------hhhhcCeEEEeCC---CHHHHHHHHHHHhC
Confidence 875 2222 224454433 432 24677778887543
No 157
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.24 E-value=6e-05 Score=84.68 Aligned_cols=117 Identities=17% Similarity=0.074 Sum_probs=83.6
Q ss_pred EEEEcCCCCCh---hhhHHhhCCCCcEEEEeCCCCCC------CCCCeEECCCCCC--HHHHHhhcCEEEecC--Ch-hH
Q 002674 226 LILNFGGQPAG---WKLKEEYLPSGWKCLVCGASDSQ------LPPNFIKLPKDAY--TPDFMAASDCMLGKI--GY-GT 291 (894)
Q Consensus 226 Vlvs~Gs~~~~---~~l~~~Ll~~~~~~vv~G~~~~~------lp~nv~v~g~~~~--vp~ll~~~d~~I~~~--G~-~t 291 (894)
.+++.|..... ..+++++...+++++++|.+... ..+||+++|+++. ++++|+.||+++..+ |+ .+
T Consensus 197 ~il~~G~~~~~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~ 276 (351)
T cd03804 197 YYLSVGRLVPYKRIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIV 276 (351)
T ss_pred EEEEEEcCccccChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCch
Confidence 46677877653 23444432223778888876531 5789999998865 678999999999643 22 56
Q ss_pred HHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 292 ~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+.|||++|+|+|+...++..|. +.+.+.|+.++..+. +.+.++|.++++++
T Consensus 277 ~~Eama~G~Pvi~~~~~~~~e~------i~~~~~G~~~~~~~~--~~la~~i~~l~~~~ 327 (351)
T cd03804 277 PVEAMASGTPVIAYGKGGALET------VIDGVTGILFEEQTV--ESLAAAVERFEKNE 327 (351)
T ss_pred HHHHHHcCCCEEEeCCCCCcce------eeCCCCEEEeCCCCH--HHHHHHHHHHHhCc
Confidence 8899999999999876554443 555667888876653 57889999998776
No 158
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.23 E-value=7.3e-05 Score=87.70 Aligned_cols=198 Identities=16% Similarity=0.145 Sum_probs=110.7
Q ss_pred hHHHHHHHHhcCCCcEEE-ECCchhHHHH---HHHhCC--cEEEE-ecC--chhHHHHHHHhhhccchHHHHHHHHhhcc
Q 002674 106 ILKDEVEWLNSIKADLVV-SDVVPVACRA---AADAGI--RSVCV-TNF--SWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (894)
Q Consensus 106 ll~~~~~~L~~~~PDlVV-~D~~~~a~~a---A~~lgI--P~V~i-sn~--~~~~~~~~~~~~~~~~~~~i~~~l~~~y~ 176 (894)
..++..+.+++.+||+|| .|++-....+ ++..|+ |++.+ +.. .|..- + . ..+.+..+
T Consensus 298 ~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR~~-R---------i----kki~k~vD 363 (608)
T PRK01021 298 RYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWRPK-R---------K----TILEKYLD 363 (608)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcc-h---------H----HHHHHHhh
Confidence 446667888899999999 5875444433 455685 98865 333 33311 0 0 11111111
Q ss_pred ccceeeecCCCCCC--CCCCc--eeecCccccc-CccChHHHHHHhCCCCCCcEEEEEcCCCCChh----h-hHHh----
Q 002674 177 HCEFLIRLPGYCPM--PAFRD--VIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAGW----K-LKEE---- 242 (894)
Q Consensus 177 ~~~~ll~~p~~~~~--p~~~~--v~~vp~~~~~-~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~----~-l~~~---- 242 (894)
+ .+..+|+..+. ..-.+ .++-|..... ...+++++++.+++++++++|.+.-||..... . +.++
T Consensus 364 ~--ll~IfPFE~~~y~~~gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~ 441 (608)
T PRK01021 364 L--LLLILPFEQNLFKDSPLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLAS 441 (608)
T ss_pred h--heecCccCHHHHHhcCCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 0 11123332110 00012 2344443332 24456778899999888899999999876531 1 2221
Q ss_pred hCCCCcEEEEeCCCCC--C-----C-C---CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCC
Q 002674 243 YLPSGWKCLVCGASDS--Q-----L-P---PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFN 311 (894)
Q Consensus 243 Ll~~~~~~vv~G~~~~--~-----l-p---~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~ 311 (894)
.+..+.++++...+.. + + . .++.++.- ..-.++|++||+.++.+| +.+.|++.+|+|+|++-....
T Consensus 442 ~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~-~~~~~~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK~s~- 518 (608)
T PRK01021 442 SLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPS-QFRYELMRECDCALAKCG-TIVLETALNQTPTIVTCQLRP- 518 (608)
T ss_pred HhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecC-cchHHHHHhcCeeeecCC-HHHHHHHHhCCCEEEEEecCH-
Confidence 2224566666432221 1 1 1 12333321 123689999999999999 889999999999999864332
Q ss_pred chHHHHHHHHH
Q 002674 312 EEPFLRNMLEF 322 (894)
Q Consensus 312 eq~~na~~l~~ 322 (894)
=....++++.+
T Consensus 519 Lty~Iak~Lvk 529 (608)
T PRK01021 519 FDTFLAKYIFK 529 (608)
T ss_pred HHHHHHHHHHh
Confidence 22245566665
No 159
>PRK14098 glycogen synthase; Provisional
Probab=98.19 E-value=0.00034 Score=82.57 Aligned_cols=135 Identities=16% Similarity=0.033 Sum_probs=87.7
Q ss_pred hHHHHHHhCCCCC-CcEEEEEcCCCCCh--hh-hHH---hhCCCCcEEEEeCCCCC----C-------CCCCeEECCCCC
Q 002674 210 RKEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDS----Q-------LPPNFIKLPKDA 271 (894)
Q Consensus 210 ~~e~r~~lgl~~~-~p~Vlvs~Gs~~~~--~~-l~~---~Ll~~~~~~vv~G~~~~----~-------lp~nv~v~g~~~ 271 (894)
+..+++.+|++.+ ...++++.|..... .+ +++ .+...+++++++|.+.. . ++.+|.+.++.+
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~ 371 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFT 371 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecC
Confidence 3456778888643 33577788877653 22 333 33345788888887542 1 467888877654
Q ss_pred C--HHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHH
Q 002674 272 Y--TPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (894)
Q Consensus 272 ~--vp~ll~~~d~~I~~~G----~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ 345 (894)
. ++.+|+.+|+|+..+= ..+.+|||++|+|.|+....+..|... +.....+.|..++..+ ++.+.++|.+
T Consensus 372 ~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~--~~~~~~~~G~l~~~~d--~~~la~ai~~ 447 (489)
T PRK14098 372 DAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIE--EVSEDKGSGFIFHDYT--PEALVAKLGE 447 (489)
T ss_pred HHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeee--cCCCCCCceeEeCCCC--HHHHHHHHHH
Confidence 2 4589999999997541 258899999999999877655544311 1111246788887655 4678888887
Q ss_pred HHh
Q 002674 346 AIS 348 (894)
Q Consensus 346 ll~ 348 (894)
+++
T Consensus 448 ~l~ 450 (489)
T PRK14098 448 ALA 450 (489)
T ss_pred HHH
Confidence 663
No 160
>PRK05905 hypothetical protein; Provisional
Probab=98.18 E-value=2.9e-05 Score=82.97 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=80.8
Q ss_pred hHHHH-HHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCC
Q 002674 610 AAYVA-GTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAP 688 (894)
Q Consensus 610 ~~yv~-g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~ 688 (894)
.|.+. -++..+.+..+.. +|++|.+..+||.|+||||+||=.+|+..+|+++++ ++.+++.+++.+ .|.
T Consensus 66 ~nli~~ka~~~l~~~~~~~--~~~~i~l~K~IP~~aGLGggSSDAAa~L~~Ln~l~~--ls~~~L~~ia~~-----lGA- 135 (258)
T PRK05905 66 SRLILVKTLEWLRDKYNIK--NHFKIKIKKRIPIGSGLGSGSSNAAVLMKWILEFEG--INEINYKDVVNK-----LGS- 135 (258)
T ss_pred cchHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCCCCCchHHHHHHHHHHHHhC--CCHHHHHHHHHH-----hCC-
Confidence 45555 5566666666754 589999999999999999999999999999999998 688899888875 243
Q ss_pred CChhhhHHhhcC-CCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 689 CGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 689 ~G~mDq~as~~G-~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
|---+++| +. ++ .. .-++..++++.+.+..+++++.++.-+|
T Consensus 136 ----DVPFfl~g~~~--a~-~~-G~GE~l~pl~~~~~~~~vlv~P~~~vST 178 (258)
T PRK05905 136 ----DIPFFLSGYKT--AY-IS-DYGSQVEDLIGQFKLTYKVIFMNVNVST 178 (258)
T ss_pred ----CcceEEeCCcc--EE-EE-eeCceeEECCCCCCceEEEECCCCCCCH
Confidence 76667777 53 32 22 2333335665444456888888776665
No 161
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism]
Probab=98.16 E-value=6.4e-05 Score=80.70 Aligned_cols=112 Identities=22% Similarity=0.276 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCC
Q 002674 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (894)
Q Consensus 611 ~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G 690 (894)
|.+.-+...+.+..+.. .|++|.|+.+||+|+|||+=||=..++..+|+++++.+++.+||+.++.+. |.
T Consensus 67 NLv~rAa~ll~~~~~~~--~~v~I~l~K~IPv~aGLGGGSSdAAa~L~~Ln~lw~~~ls~~eL~~Lg~~L-----Ga--- 136 (289)
T COG1947 67 NLVYRAAELLRKRTGIA--GGVSIHLDKNIPVGAGLGGGSSDAAAVLVALNELWGLGLSLEELAELGLRL-----GA--- 136 (289)
T ss_pred hHHHHHHHHHHHHhCCC--CCeeEEEEecCcccCcCccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh-----CC---
Confidence 66666666666666743 689999999999999999888888899999999999999999999999752 43
Q ss_pred hhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 691 ~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
|--.+++||. + +..-+ ++..++++-++...+++++.++.-+|
T Consensus 137 --DVPffl~g~t--A-~a~G~-GE~l~~~~~~~~~~~vl~~P~v~vsT 178 (289)
T COG1947 137 --DVPFFLSGGT--A-FAEGR-GEKLEPLEDPPEKWYVLAKPGVGVST 178 (289)
T ss_pred --CcCeeeeCCc--e-EEEEc-cceeeECCCCCCceEEEEeCCCCCCh
Confidence 7777888774 3 22222 33335555345667778887776555
No 162
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.16 E-value=1.8e-05 Score=86.92 Aligned_cols=110 Identities=6% Similarity=0.083 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHhhcCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHP-RDLALLCQKVENHIVGAP 688 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~-~~la~~a~~~E~~~~G~~ 688 (894)
.|.+.-++..+.+..+.. .|++|.|.++||+|+|||||||-.++++.+++..++ ++. +++.++|.+.|
T Consensus 74 ~Nlv~ka~~~~~~~~~~~--~~v~I~i~K~IP~~aGLGggSs~Aaa~l~~l~~~~~--l~~~e~L~~lA~~lG------- 142 (297)
T PRK14613 74 QNILYKTFIKARSLFPEL--PGVKIHLTKRISPAGGLGGGSTNAASLLNFLFSWRN--FFTSDEMQVFAKEIG------- 142 (297)
T ss_pred cchHHHHHHHHHHHhCCC--CCeEEEEEeCCCccCCccccHHHHHHHHHHHHhcCC--CCcHHHHHHHHHHhC-------
Confidence 577777777777666653 589999999999999999999997777767666544 444 67777888762
Q ss_pred CChhhhHHhhcCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCccc
Q 002674 689 CGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (894)
Q Consensus 689 ~G~mDq~as~~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~ 738 (894)
.| .++++||. ..+..... +..+++++|..+. +++.+++.-+|
T Consensus 143 ---aD-vP~~l~G~--~a~~~g~G-e~~~~l~~~~~~~-vlv~P~~~vsT 184 (297)
T PRK14613 143 ---SD-VPFFLGEG--HAFVTGKG-EIMEEIEVHKGQG-ILALTPQVMNT 184 (297)
T ss_pred ---Cc-cchhhcCC--eEEEecCC-cEEEEcCCCCCeE-EEEECCCCcCh
Confidence 27 55555553 23333333 2235666555554 67777777655
No 163
>PLN00142 sucrose synthase
Probab=98.06 E-value=0.00043 Score=84.47 Aligned_cols=125 Identities=15% Similarity=0.130 Sum_probs=76.4
Q ss_pred HHHhCC--CCCCcEEEEEcCCCCCh--h-hhHHhh-----CCCCcEEEEeCCC-CC----------------------CC
Q 002674 214 RKELGI--EDDVKLLILNFGGQPAG--W-KLKEEY-----LPSGWKCLVCGAS-DS----------------------QL 260 (894)
Q Consensus 214 r~~lgl--~~~~p~Vlvs~Gs~~~~--~-~l~~~L-----l~~~~~~vv~G~~-~~----------------------~l 260 (894)
++.+++ ++++| ++++.|..... . .+++++ ..++++++++|.+ .. .+
T Consensus 562 ~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL 640 (815)
T PLN00142 562 DEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNL 640 (815)
T ss_pred HHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCC
Confidence 345665 23344 67888887653 1 244432 1245777777654 10 03
Q ss_pred CCCeEECCCCC-C-----HHHHHh-hcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002674 261 PPNFIKLPKDA-Y-----TPDFMA-ASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (894)
Q Consensus 261 p~nv~v~g~~~-~-----vp~ll~-~~d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~ 329 (894)
..+|.++|+.. . +..+++ ++|+||..+ |+ .++.|||++|+|+|+...++. .+.++....|..+
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~------~EIV~dG~tG~LV 714 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP------AEIIVDGVSGFHI 714 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH------HHHhcCCCcEEEe
Confidence 46787777532 1 223444 479999753 32 589999999999999875433 3445555679999
Q ss_pred ccCCCCcccHHHHHHHHH
Q 002674 330 IRRDLLTGHWKPYLERAI 347 (894)
Q Consensus 330 ~~~~~~~~~l~~~l~~ll 347 (894)
+..+. +.+.++|.+++
T Consensus 715 ~P~D~--eaLA~aI~~lL 730 (815)
T PLN00142 715 DPYHG--DEAANKIADFF 730 (815)
T ss_pred CCCCH--HHHHHHHHHHH
Confidence 87664 46777776554
No 164
>PLN02407 diphosphomevalonate decarboxylase
Probab=98.03 E-value=5.1e-05 Score=83.22 Aligned_cols=61 Identities=23% Similarity=0.313 Sum_probs=53.5
Q ss_pred EEEEEEe--CCCCCCCCChHHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCC
Q 002674 632 ISMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIH-PRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (894)
Q Consensus 632 ~~i~i~s--~iP~g~GLgSSAAl~va~~~al~~l~~~~l~-~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~ 702 (894)
+++.|.| ++|.++||+||||..+|++.|+..+++++++ +.+|..+|. +| || .|.- |++||.
T Consensus 104 ~~~~I~S~N~~PtaaGLaSSAs~~aAl~~al~~~~~~~~~~~~~ls~lAr------~G--SG-Sa~r-S~~Gg~ 167 (343)
T PLN02407 104 LHVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVKEDFPGELSAIAR------QG--SG-SACR-SLYGGF 167 (343)
T ss_pred ccEEEEeccCCccccchHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHh------cc--Ch-HHHH-HhhCCe
Confidence 3677777 9999999999999999999999999999999 999999998 46 56 3655 999994
No 165
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.97 E-value=0.0022 Score=74.33 Aligned_cols=119 Identities=13% Similarity=0.017 Sum_probs=77.4
Q ss_pred CcEEEEEcCCCCCh---hhhHHh---hC---C----CCcEEEEeCCCCC-----------------CCCCCeEECCCCC-
Q 002674 223 VKLLILNFGGQPAG---WKLKEE---YL---P----SGWKCLVCGASDS-----------------QLPPNFIKLPKDA- 271 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~---~~l~~~---Ll---~----~~~~~vv~G~~~~-----------------~lp~nv~v~g~~~- 271 (894)
.+.++++.|..... ..++++ +. + ++++++++|.... .+.++|+++++.+
T Consensus 236 ~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~ 315 (419)
T cd03806 236 RENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPF 315 (419)
T ss_pred CCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCH
Confidence 34578888876652 122332 21 1 2578888886421 0357899988753
Q ss_pred -CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH---HcCcEEEEccCCCCcccHHHHH
Q 002674 272 -YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEMIRRDLLTGHWKPYL 343 (894)
Q Consensus 272 -~vp~ll~~~d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~---~~G~g~~~~~~~~~~~~l~~~l 343 (894)
.++.+|+.||++|... |+ .++.|||++|+|+|+....+..+ +.++ ....|.... +++.+.++|
T Consensus 316 ~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~-----~iv~~~~~g~~G~l~~----d~~~la~ai 386 (419)
T cd03806 316 EELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL-----DIVVPWDGGPTGFLAS----TAEEYAEAI 386 (419)
T ss_pred HHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCch-----heeeccCCCCceEEeC----CHHHHHHHH
Confidence 5568999999998643 32 47899999999999876432211 1122 345677653 357899999
Q ss_pred HHHHhcC
Q 002674 344 ERAISLK 350 (894)
Q Consensus 344 ~~ll~~~ 350 (894)
.++++++
T Consensus 387 ~~ll~~~ 393 (419)
T cd03806 387 EKILSLS 393 (419)
T ss_pred HHHHhCC
Confidence 9999765
No 166
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.97 E-value=0.00029 Score=82.93 Aligned_cols=119 Identities=14% Similarity=0.034 Sum_probs=83.2
Q ss_pred CcEEEEEcCCCCCh---hhhHHhh---C--CCCcEEEEeCCCCC--C-------------CCCCeEECCCCCCHHHHHhh
Q 002674 223 VKLLILNFGGQPAG---WKLKEEY---L--PSGWKCLVCGASDS--Q-------------LPPNFIKLPKDAYTPDFMAA 279 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~---~~l~~~L---l--~~~~~~vv~G~~~~--~-------------lp~nv~v~g~~~~vp~ll~~ 279 (894)
.+.++++.|..... ..+++++ . .++++++++|.... . +.+||+++| ...++++|+.
T Consensus 292 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~ 370 (475)
T cd03813 292 EPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPK 370 (475)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHh
Confidence 45678888887653 1233322 1 26788888887621 0 467899999 5578999999
Q ss_pred cCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc------CcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 280 SDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 280 ~d~~I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~------G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
+|++|..+ -.+++.|||++|+|+|+...++. .+.+... ..|..++..+. +.+.++|.+++++
T Consensus 371 aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~------~elv~~~~~~~~g~~G~lv~~~d~--~~la~ai~~ll~~ 442 (475)
T cd03813 371 LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSC------RELIEGADDEALGPAGEVVPPADP--EALARAILRLLKD 442 (475)
T ss_pred CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCCh------HHHhcCCcccccCCceEEECCCCH--HHHHHHHHHHhcC
Confidence 99999653 23689999999999999764332 3334442 26888876664 5889999999876
Q ss_pred C
Q 002674 350 K 350 (894)
Q Consensus 350 ~ 350 (894)
+
T Consensus 443 ~ 443 (475)
T cd03813 443 P 443 (475)
T ss_pred H
Confidence 6
No 167
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.95 E-value=2.5e-05 Score=87.85 Aligned_cols=136 Identities=16% Similarity=0.096 Sum_probs=75.7
Q ss_pred CCCcEEEEEcCCCCC---h---hhh---HHhhCC-CCcEEEEeCCCCC-----------CCCCCeEECCCCCCH--HHHH
Q 002674 221 DDVKLLILNFGGQPA---G---WKL---KEEYLP-SGWKCLVCGASDS-----------QLPPNFIKLPKDAYT--PDFM 277 (894)
Q Consensus 221 ~~~p~Vlvs~Gs~~~---~---~~l---~~~Ll~-~~~~~vv~G~~~~-----------~lp~nv~v~g~~~~v--p~ll 277 (894)
..++++++++=.... + .++ ++++.. .++.+++...+.+ .+ +|+++++...+. -.+|
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll 256 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLL 256 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHH
Confidence 567899999832221 1 122 223322 4677777655332 14 588877644332 2678
Q ss_pred hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcCCC-----
Q 002674 278 AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC----- 352 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~----- 352 (894)
++|+++||.+| |-.-||.++|+|+|.+. ...+ .+.....|..+.+. ..++.+..++++++..+..
T Consensus 257 ~~a~~vvgdSs-GI~eEa~~lg~P~v~iR--~~ge----Rqe~r~~~~nvlv~---~~~~~I~~ai~~~l~~~~~~~~~~ 326 (346)
T PF02350_consen 257 KNADLVVGDSS-GIQEEAPSLGKPVVNIR--DSGE----RQEGRERGSNVLVG---TDPEAIIQAIEKALSDKDFYRKLK 326 (346)
T ss_dssp HHESEEEESSH-HHHHHGGGGT--EEECS--SS-S-----HHHHHTTSEEEET---SSHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hcceEEEEcCc-cHHHHHHHhCCeEEEec--CCCC----CHHHHhhcceEEeC---CCHHHHHHHHHHHHhChHHHHhhc
Confidence 89999999999 44449999999999995 2222 34466677777754 3457888899988865111
Q ss_pred ----ccCCCCHHHHHHHHH
Q 002674 353 ----YEGGINGGEVAAHIL 367 (894)
Q Consensus 353 ----~~~~~~g~~~~A~~i 367 (894)
.-.+++.++++++.|
T Consensus 327 ~~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 327 NRPNPYGDGNASERIVEIL 345 (346)
T ss_dssp CS--TT-SS-HHHHHHHHH
T ss_pred cCCCCCCCCcHHHHHHHhh
Confidence 014566666666654
No 168
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.95 E-value=0.00059 Score=77.71 Aligned_cols=115 Identities=20% Similarity=0.206 Sum_probs=76.3
Q ss_pred cEEEEEcCCCCCh--hhhHHhhC--CCCcEEEEeCCCC--CC---C--CCCeEECCCC--CCHHHHHhhcCEEEecC---
Q 002674 224 KLLILNFGGQPAG--WKLKEEYL--PSGWKCLVCGASD--SQ---L--PPNFIKLPKD--AYTPDFMAASDCMLGKI--- 287 (894)
Q Consensus 224 p~Vlvs~Gs~~~~--~~l~~~Ll--~~~~~~vv~G~~~--~~---l--p~nv~v~g~~--~~vp~ll~~~d~~I~~~--- 287 (894)
+.+++++|+.+.. .+++..+. .++|.++++|... .. + .+||+++|+. +.++.+|+++|++|...
T Consensus 205 ~~~i~y~G~l~~~~d~~ll~~la~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~ 284 (373)
T cd04950 205 RPVIGYYGAIAEWLDLELLEALAKARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLN 284 (373)
T ss_pred CCEEEEEeccccccCHHHHHHHHHHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccc
Confidence 3477888888753 23444332 3689999998752 11 2 3799999987 46789999999998642
Q ss_pred -----C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 288 -----G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 288 -----G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+ .+.+.|+|++|+|+|..+.+ + ..+..+.++.. .. +.+.|.++|++++.++
T Consensus 285 ~~~~~~~P~Kl~EylA~G~PVVat~~~---~------~~~~~~~~~~~-~~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 285 ELTRATSPLKLFEYLAAGKPVVATPLP---E------VRRYEDEVVLI-AD--DPEEFVAAIEKALLED 341 (373)
T ss_pred hhhhcCCcchHHHHhccCCCEEecCcH---H------HHhhcCcEEEe-CC--CHHHHHHHHHHHHhcC
Confidence 1 24689999999999987632 1 12223323333 33 3578999999976554
No 169
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.90 E-value=4.6e-05 Score=78.38 Aligned_cols=109 Identities=22% Similarity=0.337 Sum_probs=78.0
Q ss_pred HHHhCCCC--CCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhh
Q 002674 621 MTELGVRF--EDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA 698 (894)
Q Consensus 621 ~~~~g~~~--~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~ 698 (894)
+.+.++.. ..|.++.+.|+||.|.|++||.|=.||++.|++.++|..+.+.+|+++|..+| |+ |- .+
T Consensus 71 la~~~~~~~~~~~i~l~lqSsIPvgKG~ASSTADl~At~~A~A~~l~~~l~es~iakLcv~iE------Pt---Ds--ii 139 (293)
T COG4542 71 LARWGVTKLINTGIDLLLQSSIPVGKGMASSTADLVATARATARFLGRELRESEIAKLCVSIE------PT---DS--II 139 (293)
T ss_pred HHHhCccceecCCeeEEEeccccccccccccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhcC------Cc---cc--ee
Confidence 34455432 25899999999999999999999999999999999999999999999999988 22 11 22
Q ss_pred cCCCCeEEEEEecCCceeEEeecCCCeEEEEEeCCCCcccCCCCchh
Q 002674 699 CGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGS 745 (894)
Q Consensus 699 ~G~~~~~~~~~~~~~~~~~~v~~p~~~~~vv~~sgv~~~~~~~~y~~ 745 (894)
|-+ +.++|.+...+.+...-++.+.+++++.+..-.+ .+|+.
T Consensus 140 F~~---~tlFd~r~g~~~~~~g~~PpL~ilv~e~~~~v~T--~~y~q 181 (293)
T COG4542 140 FDK---ATLFDQREGRVIEFLGEMPPLHILVFEGKGTVET--VDYNQ 181 (293)
T ss_pred ccc---ceeehhccchHHHhcCCCCceEEEEEcCCCceee--eeccC
Confidence 322 3455655554323333345788888887654333 46774
No 170
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=97.88 E-value=6.9e-06 Score=79.45 Aligned_cols=112 Identities=22% Similarity=0.275 Sum_probs=59.6
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHH-HHHHHHHHHhhc
Q 002674 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRL-ASLEKYSETAVA 101 (894)
Q Consensus 23 ~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~-~~l~~~~~~~~~ 101 (894)
++...||+.|+++|+++|+++||+|++.+... +...+...++.+.++..+... ... ...........
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~---~~~~v~~~Gl~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 72 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRRGHEVRLATPPD---FRERVEAAGLEFVPIPGDSRL--------PRSLEPLANLRRLAR- 72 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHTT-EEEEEETGG---GHHHHHHTT-EEEESSSCGGG--------GHHHHHHHHHHCHHH-
T ss_pred EcCChhHHHHHHHHHHHHhccCCeEEEeeccc---ceecccccCceEEEecCCcCc--------CcccchhhhhhhHHH-
Confidence 44558999999999999999999999988643 333333234555554222000 000 01111111100
Q ss_pred chHHhHHHHHHHHhc------------CCCcEEEECC-chhHHHHHHHhCCcEEEEecC
Q 002674 102 PRKSILKDEVEWLNS------------IKADLVVSDV-VPVACRAAADAGIRSVCVTNF 147 (894)
Q Consensus 102 ~~~~ll~~~~~~L~~------------~~PDlVV~D~-~~~a~~aA~~lgIP~V~isn~ 147 (894)
. ...+.+..+.+++ ..+|+++.+. ...+..+|+.++||.+...-+
T Consensus 73 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~ 130 (139)
T PF03033_consen 73 L-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLF 130 (139)
T ss_dssp H-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESS
T ss_pred H-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhC
Confidence 0 0011222233332 2456666554 566778999999999887543
No 171
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.72 E-value=0.00014 Score=72.75 Aligned_cols=132 Identities=19% Similarity=0.155 Sum_probs=91.2
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCCh---hhhHH---hhC---CCCcEEEEeCCCCC-----------CCCCCeEECCC
Q 002674 210 RKEVRKELGIEDDVKLLILNFGGQPAG---WKLKE---EYL---PSGWKCLVCGASDS-----------QLPPNFIKLPK 269 (894)
Q Consensus 210 ~~e~r~~lgl~~~~p~Vlvs~Gs~~~~---~~l~~---~Ll---~~~~~~vv~G~~~~-----------~lp~nv~v~g~ 269 (894)
++.++...+.+. .+.++++.|+.... ..+++ .+. .+++.++++|.... .+..+++++++
T Consensus 2 ~~~~~~~~~~~~-~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (172)
T PF00534_consen 2 KDKLREKLKIPD-KKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGY 80 (172)
T ss_dssp HHHHHHHTTT-T-TSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEES
T ss_pred hHHHHHHcCCCC-CCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccc
Confidence 455666766644 45577778877663 12333 221 46788899994331 14678998887
Q ss_pred CC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHH
Q 002674 270 DA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (894)
Q Consensus 270 ~~--~vp~ll~~~d~~I~~----~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l 343 (894)
.. .+..++..||++|.. +...++.|||++|+|+|+...+ .+.+.+.....|..++..+ .+.+.++|
T Consensus 81 ~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~------~~~e~~~~~~~g~~~~~~~--~~~l~~~i 152 (172)
T PF00534_consen 81 VPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIG------GNNEIINDGVNGFLFDPND--IEELADAI 152 (172)
T ss_dssp HSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESST------HHHHHSGTTTSEEEESTTS--HHHHHHHH
T ss_pred ccccccccccccceeccccccccccccccccccccccceeecccc------CCceeeccccceEEeCCCC--HHHHHHHH
Confidence 65 566899999999986 4557999999999999987632 3456666777799998764 56899999
Q ss_pred HHHHhcC
Q 002674 344 ERAISLK 350 (894)
Q Consensus 344 ~~ll~~~ 350 (894)
.++++++
T Consensus 153 ~~~l~~~ 159 (172)
T PF00534_consen 153 EKLLNDP 159 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHCCH
Confidence 9998775
No 172
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism]
Probab=97.70 E-value=8.1e-05 Score=77.32 Aligned_cols=92 Identities=20% Similarity=0.230 Sum_probs=64.6
Q ss_pred CCCCChHHHHHHHHH-HHHHHH-hCCCCCH-HHHHHHHHHHHHhhcC-CCCChhhhHHhhcCCCCeEEEEEecCCcee--
Q 002674 643 GKGVSSSASVEVASM-SAIAAA-HGLNIHP-RDLALLCQKVENHIVG-APCGVMDQMASACGEANKLLAMVCQPAELL-- 716 (894)
Q Consensus 643 g~GLgSSAAl~va~~-~al~~l-~~~~l~~-~~la~~a~~~E~~~~G-~~~G~mDq~as~~G~~~~~~~~~~~~~~~~-- 716 (894)
-.|||||||+++.+. .+++.+ .+.+++. .++-++||.+-..-+| ..|| -|-++++||+ +++-.|.|....
T Consensus 107 KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggIGSG-fDiaaA~fGs---iiyrRF~p~li~~l 182 (337)
T COG3890 107 KTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGIGSG-FDIAAAIFGS---IIYRRFEPGLIPKL 182 (337)
T ss_pred cCCCcchhHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhCCCCcc-chhhHhhhcc---eEEeecCcchhhhh
Confidence 689999999999988 344443 5556665 7888999988776665 5566 6999999999 344345444321
Q ss_pred ---EEeecCCCeEEEEEeCCCCcccC
Q 002674 717 ---GVVEIPSHIRFWGIDSGIRHSVG 739 (894)
Q Consensus 717 ---~~v~~p~~~~~vv~~sgv~~~~~ 739 (894)
..+.+ .++.++..+++...+|.
T Consensus 183 ~qig~~nf-g~y~LmmGd~a~gSeTv 207 (337)
T COG3890 183 RQIGAVNF-GDYYLMMGDQAIGSETV 207 (337)
T ss_pred HhhCcccc-cCeeeeecccccCccch
Confidence 12222 37899999988877765
No 173
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.67 E-value=0.0055 Score=65.64 Aligned_cols=301 Identities=15% Similarity=0.084 Sum_probs=148.9
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHHh
Q 002674 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (894)
Q Consensus 27 ~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~l 106 (894)
.-|+.....+.++|.++||+|.+.|...... ...+..-++.+..++-. |. .... ..+..+. ..
T Consensus 10 ~~hvhfFk~lI~elekkG~ev~iT~rd~~~v-~~LLd~ygf~~~~Igk~-g~-------~tl~---~Kl~~~~-----eR 72 (346)
T COG1817 10 PPHVHFFKNLIWELEKKGHEVLITCRDFGVV-TELLDLYGFPYKSIGKH-GG-------VTLK---EKLLESA-----ER 72 (346)
T ss_pred cchhhHHHHHHHHHHhCCeEEEEEEeecCcH-HHHHHHhCCCeEeeccc-CC-------ccHH---HHHHHHH-----HH
Confidence 4688999999999999999999988543211 11111112333333211 10 1111 1222221 11
Q ss_pred HHHHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceeeecCC
Q 002674 107 LKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIRLPG 186 (894)
Q Consensus 107 l~~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~~~ll~~p~ 186 (894)
.-.+.+++.+++||+.+.-.++-...+|.-+|+|++.+-|.-.. ...+.. ..++ ++.++. |.
T Consensus 73 ~~~L~ki~~~~kpdv~i~~~s~~l~rvafgLg~psIi~~D~ehA-~~qnkl------~~Pl----------a~~ii~-P~ 134 (346)
T COG1817 73 VYKLSKIIAEFKPDVAIGKHSPELPRVAFGLGIPSIIFVDNEHA-EAQNKL------TLPL----------ADVIIT-PE 134 (346)
T ss_pred HHHHHHHHhhcCCceEeecCCcchhhHHhhcCCceEEecCChhH-HHHhhc------chhh----------hhheec-cc
Confidence 23456788999999999977888888999999999887442211 000000 0001 111110 00
Q ss_pred CCC------CCCC-CceeecCccc---ccC-ccChHHHHHHhCCCCCCcEEEEEcCCCCCh-------hhhHH----hhC
Q 002674 187 YCP------MPAF-RDVIDVPLVV---RRL-HKSRKEVRKELGIEDDVKLLILNFGGQPAG-------WKLKE----EYL 244 (894)
Q Consensus 187 ~~~------~p~~-~~v~~vp~~~---~~~-~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~-------~~l~~----~Ll 244 (894)
... .-.. -++.+...+. ... -...+++.+++|+.++.++|+.=+-+.++. .+.+. .+.
T Consensus 135 ~~~~~~~~~~G~~p~~i~~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~ 214 (346)
T COG1817 135 AIDEEELLDFGADPNKISGYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELK 214 (346)
T ss_pred ccchHHHHHhCCCccceecccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHH
Confidence 000 0000 0111111111 001 112346778899988788888866554441 11233 232
Q ss_pred CCCcEEEEeCCCCCC--CCCCeE---ECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH
Q 002674 245 PSGWKCLVCGASDSQ--LPPNFI---KLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (894)
Q Consensus 245 ~~~~~~vv~G~~~~~--lp~nv~---v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~ 319 (894)
+-+ +|+.-....+ +.+.+. +-.-..+.-++|=-|+++|+.|| +.-.||+..|+|.|.+- ++ .--.--++
T Consensus 215 k~g--iV~ipr~~~~~eife~~~n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~-pG--kll~vdk~ 288 (346)
T COG1817 215 KYG--IVLIPREKEQAEIFEGYRNIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCY-PG--KLLAVDKY 288 (346)
T ss_pred hCc--EEEecCchhHHHHHhhhccccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEec-CC--ccccccHH
Confidence 223 3333222221 222222 11101122247778999999555 77789999999999985 22 11122366
Q ss_pred HHHcCcEEEEccCCCCcccHHHHHHHHHhcCCCc----cCCCCHHHHHHHHHHHHHc
Q 002674 320 LEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY----EGGINGGEVAAHILQETAI 372 (894)
Q Consensus 320 l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~~~~----~~~~~g~~~~A~~i~~~l~ 372 (894)
+.+.|.- +...+.. +.|..+++.+ .++... ....+-.+...+.+.+++.
T Consensus 289 lie~G~~--~~s~~~~-~~~~~a~~~l-~~~~~kK~~~~k~e~~~~~ii~~ve~~~e 341 (346)
T COG1817 289 LIEKGLL--YHSTDEI-AIVEYAVRNL-KYRRLKKTGVLKLEDPTRLIIDVVEEMLE 341 (346)
T ss_pred HHhcCce--eecCCHH-HHHHHHHHHh-hchhhccccccccccHHHHHHHHHHHHhh
Confidence 7777644 4433432 4455444444 333111 1334444555555555543
No 174
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.66 E-value=0.00065 Score=76.93 Aligned_cols=121 Identities=12% Similarity=0.017 Sum_probs=85.4
Q ss_pred CcEEEEEcCCCCCh---hhhHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEE
Q 002674 223 VKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~~---~~l~~~---Ll--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~~ 283 (894)
.+..+++.|..... ..+++. +. .++++++++|.+... ++.++.+.|+.+.+..+|+.||++
T Consensus 203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~ 282 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLS 282 (372)
T ss_pred CCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEE
Confidence 34567788877553 123332 21 266788887765421 467899999888888999999999
Q ss_pred EecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 284 LGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 284 I~~~----G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
|..+ ...++.|||++|+|+|+...... +.+.+.....|.+++..+. +.+.++|.++++++
T Consensus 283 v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g-----~~~~v~~~~~G~lv~~~d~--~~la~~i~~ll~~~ 346 (372)
T cd04949 283 LLTSQSEGFGLSLMEALSHGLPVISYDVNYG-----PSEIIEDGENGYLVPKGDI--EALAEAIIELLNDP 346 (372)
T ss_pred EecccccccChHHHHHHhCCCCEEEecCCCC-----cHHHcccCCCceEeCCCcH--HHHHHHHHHHHcCH
Confidence 9754 23689999999999999864321 2344566678888886664 58899999998765
No 175
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.55 E-value=0.027 Score=62.78 Aligned_cols=101 Identities=18% Similarity=0.104 Sum_probs=73.3
Q ss_pred CCeEECCCCCCHH--HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccH
Q 002674 262 PNFIKLPKDAYTP--DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (894)
Q Consensus 262 ~nv~v~g~~~~vp--~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l 339 (894)
+|++.++..++.+ .+|.+|-+++|-+| +..-||-..|+|++.+. ...|++. ..+.|.-+.+..+ .+.+
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl~lR--~~TERPE----~v~agt~~lvg~~---~~~i 331 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFLILTDSG-GIQEEAPSLGKPVLVLR--DTTERPE----GVEAGTNILVGTD---EENI 331 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceEEEecCC-chhhhHHhcCCcEEeec--cCCCCcc----ceecCceEEeCcc---HHHH
Confidence 4688776665554 68899999999998 78889999999999998 4456643 4456666666543 3577
Q ss_pred HHHHHHHHhcCCCcc---------CCCCHHHHHHHHHHHHHc
Q 002674 340 KPYLERAISLKPCYE---------GGINGGEVAAHILQETAI 372 (894)
Q Consensus 340 ~~~l~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l~ 372 (894)
.+++.++++++..|. +++....++++.+..+..
T Consensus 332 ~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~~ 373 (383)
T COG0381 332 LDAATELLEDEEFYERMSNAKNPYGDGNASERIVEILLNYFD 373 (383)
T ss_pred HHHHHHHhhChHHHHHHhcccCCCcCcchHHHHHHHHHHHhh
Confidence 889999988754332 455577788888877754
No 176
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only]
Probab=97.43 E-value=0.0027 Score=66.85 Aligned_cols=93 Identities=24% Similarity=0.357 Sum_probs=71.8
Q ss_pred CEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEEe
Q 002674 631 SISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVC 710 (894)
Q Consensus 631 G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~~ 710 (894)
|+.+.+.+++|.|+|+|-|+|...+++.|++..++.+ .++.++.|+.+|-. .-+|+.|-.+..+|| +.+..
T Consensus 74 ~~~v~~~~~~P~G~G~G~Sga~AL~~Ala~a~~~~~~--~~~a~~~AH~aEV~---~gtGLGDVvAq~~GG----lViR~ 144 (283)
T COG1829 74 GVGVRIESPVPLGCGYGVSGAGALGTALALAEELGLG--EESAARIAHVAEVE---NGTGLGDVVAQYTGG----LVIRV 144 (283)
T ss_pred CcceEEEecCCCCcccchhHHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHH---cCCCchHHHHHhcCc----EEEEe
Confidence 5778999999999999999999999999999998876 78899999999954 345788999999999 33444
Q ss_pred cCC--ce--eEEeecCCCeEEEEEeCC
Q 002674 711 QPA--EL--LGVVEIPSHIRFWGIDSG 733 (894)
Q Consensus 711 ~~~--~~--~~~v~~p~~~~~vv~~sg 733 (894)
++. .+ .+.++.|. ++++...-|
T Consensus 145 ~pG~Pg~~~vd~Ip~~~-~~V~~~~~g 170 (283)
T COG1829 145 KPGGPGEGEVDRIPVPG-LRVITISLG 170 (283)
T ss_pred cCCCCCeEEEEEeecCC-ceEEEEEcc
Confidence 432 22 24566554 776655433
No 177
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism]
Probab=97.39 E-value=0.00069 Score=73.88 Aligned_cols=81 Identities=17% Similarity=0.207 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCC
Q 002674 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (894)
Q Consensus 610 ~~yv~g~i~~~~~~~g~~~~~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~ 689 (894)
...++-++..+-++.|.. .++.|...++.|-++||+||||...|++.|++.+++..++..+|.++|+. |..|
T Consensus 71 ~~k~~~~ld~~R~~~~~~--~~~~i~s~n~~ptaaGLaSSaag~AAl~~Al~~~~~~~~d~~~lS~~AR~------gSGS 142 (329)
T COG3407 71 NEKARRVLDRFRKEYGIS--FKVKIVSYNNFPTAAGLASSAAGAAALAAALNRLYDLDLDDEFLSRIARL------GSGS 142 (329)
T ss_pred HHHHHHHHHHHHHhhccc--ceEEEEEecCCCccccccccHHHHHHHHHHHHhhhccCCCHHHHHHHHHH------hccc
Confidence 466677776655456654 47999999999999999999999999999999999999999999999985 4444
Q ss_pred ChhhhHHhhcCCC
Q 002674 690 GVMDQMASACGEA 702 (894)
Q Consensus 690 G~mDq~as~~G~~ 702 (894)
+ .-|++||.
T Consensus 143 a----~RS~~Gg~ 151 (329)
T COG3407 143 A----SRSIFGGF 151 (329)
T ss_pred h----hhhhcCCe
Confidence 3 35899996
No 178
>PLN02949 transferase, transferring glycosyl groups
Probab=97.19 E-value=0.051 Score=63.71 Aligned_cols=117 Identities=10% Similarity=0.004 Sum_probs=73.9
Q ss_pred EEEEEcCCCCCh--h-hhHHhh------C---CCCcEEEEeCCCC----C----C---------CCCCeEECCCCC--CH
Q 002674 225 LLILNFGGQPAG--W-KLKEEY------L---PSGWKCLVCGASD----S----Q---------LPPNFIKLPKDA--YT 273 (894)
Q Consensus 225 ~Vlvs~Gs~~~~--~-~l~~~L------l---~~~~~~vv~G~~~----~----~---------lp~nv~v~g~~~--~v 273 (894)
.++++.|..... . .+++++ . .++++++++|... . + +.++|.++++.+ .+
T Consensus 269 ~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el 348 (463)
T PLN02949 269 PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDL 348 (463)
T ss_pred CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHH
Confidence 467778876542 1 123321 1 1468888887631 0 0 467899988773 56
Q ss_pred HHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH--cC-cEEEEccCCCCcccHHHHHHHH
Q 002674 274 PDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF--YQ-GGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 274 p~ll~~~d~~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~--~G-~g~~~~~~~~~~~~l~~~l~~l 346 (894)
+++|+.||++|... |+ .++.|||++|+|+|+...++..+. .+.. .| .|...+ +.+.|.++|.++
T Consensus 349 ~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e-----IV~~~~~g~tG~l~~----~~~~la~ai~~l 419 (463)
T PLN02949 349 VRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD-----IVLDEDGQQTGFLAT----TVEEYADAILEV 419 (463)
T ss_pred HHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce-----eeecCCCCcccccCC----CHHHHHHHHHHH
Confidence 68999999999532 33 479999999999999886442211 0111 12 244432 357899999999
Q ss_pred HhcC
Q 002674 347 ISLK 350 (894)
Q Consensus 347 l~~~ 350 (894)
++++
T Consensus 420 l~~~ 423 (463)
T PLN02949 420 LRMR 423 (463)
T ss_pred HhCC
Confidence 8753
No 179
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.97 E-value=0.0032 Score=74.41 Aligned_cols=121 Identities=10% Similarity=-0.035 Sum_probs=82.0
Q ss_pred CCcEEEEEcCCCCCh---hhhHHhh---C--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCE
Q 002674 222 DVKLLILNFGGQPAG---WKLKEEY---L--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDC 282 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~~L---l--~~~~~~vv~G~~~~~-----------lp~nv~v~g~~~~vp~ll~~~d~ 282 (894)
.++.++++.|..... ..+++++ . .+++++++.|.+... +.++|.+.|+. .++++++.+|+
T Consensus 317 r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv 395 (500)
T TIGR02918 317 RKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYEL 395 (500)
T ss_pred cCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCE
Confidence 345678888988763 2344432 1 267888888876421 35678889976 57899999999
Q ss_pred EEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCC--CC----cccHHHHHHHHHh
Q 002674 283 MLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD--LL----TGHWKPYLERAIS 348 (894)
Q Consensus 283 ~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~--~~----~~~l~~~l~~ll~ 348 (894)
+|..+ | ..+++|||++|+|+|+....+. +.+.++....|.+++..+ -. .+.+.++|.++++
T Consensus 396 ~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G-----~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~ 466 (500)
T TIGR02918 396 YLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG-----NPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN 466 (500)
T ss_pred EEEcCccccccHHHHHHHHhCCCEEEecCCCC-----CHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC
Confidence 99754 3 3689999999999999875321 223455555788887321 11 3567888888883
No 180
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.92 E-value=0.083 Score=59.49 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=53.7
Q ss_pred CHHHHHhhcCEEE-ec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 272 YTPDFMAASDCML-GK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 272 ~vp~ll~~~d~~I-~~----~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
.|-.++..+|+.+ +- -|+--..|.+++|+|+|.-| ...-|...++.+.+.|+++.++.. +.+..+++.+
T Consensus 310 EL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp--~~~Nf~ei~~~l~~~ga~~~v~~~----~~l~~~v~~l 383 (419)
T COG1519 310 ELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGP--YTFNFSDIAERLLQAGAGLQVEDA----DLLAKAVELL 383 (419)
T ss_pred HHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCC--ccccHHHHHHHHHhcCCeEEECCH----HHHHHHHHHh
Confidence 4456778899844 31 13345789999999999999 445677889999999999999752 4566666666
Q ss_pred HhcC
Q 002674 347 ISLK 350 (894)
Q Consensus 347 l~~~ 350 (894)
+.++
T Consensus 384 ~~~~ 387 (419)
T COG1519 384 LADE 387 (419)
T ss_pred cCCH
Confidence 6543
No 181
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.82 E-value=0.0086 Score=56.32 Aligned_cols=108 Identities=16% Similarity=0.145 Sum_probs=75.3
Q ss_pred EEEEcCCCCChh-hhHH-----hhCCC--CcEEEEeCCCCCCCC-CCeEECCCCC--CHHHHHhhcCEEEecCChhHHHH
Q 002674 226 LILNFGGQPAGW-KLKE-----EYLPS--GWKCLVCGASDSQLP-PNFIKLPKDA--YTPDFMAASDCMLGKIGYGTVSE 294 (894)
Q Consensus 226 Vlvs~Gs~~~~~-~l~~-----~Ll~~--~~~~vv~G~~~~~lp-~nv~v~g~~~--~vp~ll~~~d~~I~~~G~~t~~E 294 (894)
++|+.|+.-.+. .+.. .+... .-.++-.|.+... | .+.++++|.. -+..+...+.++|+|+|-||+..
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~k-pvagl~v~~F~~~~kiQsli~darIVISHaG~GSIL~ 80 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDIK-PVAGLRVYGFDKEEKIQSLIHDARIVISHAGEGSILL 80 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCcc-cccccEEEeechHHHHHHHhhcceEEEeccCcchHHH
Confidence 688999874431 1111 11111 1133445775432 3 4467777763 34578888999999999999999
Q ss_pred HHHcCCcEEEEeCCC------CCchHHHHHHHHHcCcEEEEccCCC
Q 002674 295 ALAYKLPFVFVRRDY------FNEEPFLRNMLEFYQGGVEMIRRDL 334 (894)
Q Consensus 295 al~~G~P~l~ip~~~------~~eq~~na~~l~~~G~g~~~~~~~~ 334 (894)
++..++|.|++|+.. ..+|...|..+.+.++-+..++.+.
T Consensus 81 ~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~ 126 (161)
T COG5017 81 LLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTEL 126 (161)
T ss_pred HhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCch
Confidence 999999999999753 2357788999999999998886543
No 182
>PHA01633 putative glycosyl transferase group 1
Probab=96.71 E-value=0.0069 Score=67.54 Aligned_cols=138 Identities=12% Similarity=0.052 Sum_probs=84.3
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--h-hhHHh---hCC--CC----cEEEEeCCCC-C--CCCCCeEECCCC-----
Q 002674 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YLP--SG----WKCLVCGASD-S--QLPPNFIKLPKD----- 270 (894)
Q Consensus 211 ~e~r~~lgl~~~~p~Vlvs~Gs~~~~--~-~l~~~---Ll~--~~----~~~vv~G~~~-~--~lp~nv~v~g~~----- 270 (894)
++++++++...+...++++.|..... . .++++ +.. ++ +++++.|... . .++++|+++++.
T Consensus 135 ~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~~~~~l~l~~~V~f~g~~G~~~~ 214 (335)
T PHA01633 135 PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHKQFTQLEVPANVHFVAEFGHNSR 214 (335)
T ss_pred HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHHHHHHcCCCCcEEEEecCCCCCH
Confidence 45666666432344567777877652 1 23332 221 22 3566666432 1 267889887542
Q ss_pred CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCch----------HHHHHHHH--HcCcEEEEccCCC
Q 002674 271 AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEE----------PFLRNMLE--FYQGGVEMIRRDL 334 (894)
Q Consensus 271 ~~vp~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq----------~~na~~l~--~~G~g~~~~~~~~ 334 (894)
++++++++++|+||..+ | ..++.|||++|+|+|+...++..|- ..++..+. ..|.|+.++. .
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~--~ 292 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHK--F 292 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecC--C
Confidence 35678999999999754 3 3689999999999999865443331 11222222 3566766653 3
Q ss_pred CcccHHHHHHHHHhcC
Q 002674 335 LTGHWKPYLERAISLK 350 (894)
Q Consensus 335 ~~~~l~~~l~~ll~~~ 350 (894)
.++.+.++|.++++..
T Consensus 293 d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 293 QIEDMANAIILAFELQ 308 (335)
T ss_pred CHHHHHHHHHHHHhcc
Confidence 4578888998886554
No 183
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.70 E-value=0.0025 Score=60.92 Aligned_cols=115 Identities=21% Similarity=0.154 Sum_probs=67.7
Q ss_pred EEEEEcCCCCCh---hhhHH-h---hC--CCCcEEEEeCCCCCC---C-CCCeEECCCCCCHHHHHhhcCEEEecC----
Q 002674 225 LLILNFGGQPAG---WKLKE-E---YL--PSGWKCLVCGASDSQ---L-PPNFIKLPKDAYTPDFMAASDCMLGKI---- 287 (894)
Q Consensus 225 ~Vlvs~Gs~~~~---~~l~~-~---Ll--~~~~~~vv~G~~~~~---l-p~nv~v~g~~~~vp~ll~~~d~~I~~~---- 287 (894)
++++++|+.... ..+++ . +. .+++.+.+.|...+. + .+||++.|+++.++++|+.||++|...
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~ 82 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDELKRLRRPNVRFHGFVEELPEILAAADVGLIPSRFNE 82 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-BSS-S
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEEeeCCC
Confidence 456677766542 12344 2 21 256888888875432 3 569999998766778999999999743
Q ss_pred C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 288 G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 288 G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
| .+++.|++++|+|+|+.+. . .....+..+.+..+ .. +++.|.++|.++++|
T Consensus 83 ~~~~k~~e~~~~G~pvi~~~~-~------~~~~~~~~~~~~~~-~~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 83 GFPNKLLEAMAAGKPVIASDN-G------AEGIVEEDGCGVLV-AN--DPEELAEAIERLLND 135 (135)
T ss_dssp CC-HHHHHHHCTT--EEEEHH-H------CHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred cCcHHHHHHHHhCCCEEECCc-c------hhhheeecCCeEEE-CC--CHHHHHHHHHHHhcC
Confidence 2 3789999999999999873 1 12234456777777 33 357999999998864
No 184
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]
Probab=96.67 E-value=0.0059 Score=64.92 Aligned_cols=62 Identities=26% Similarity=0.382 Sum_probs=53.4
Q ss_pred CEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCC
Q 002674 631 SISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (894)
Q Consensus 631 G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~ 702 (894)
.++|.-.+|.|..+||.||||=-.|++.||+.+++++.++++|-.+|+.. .|..|- |+|||.
T Consensus 105 ~lHI~S~nNFPtAAGLASSAAG~Aalv~alarly~l~~~~~els~iAR~G----SGSACR------Sl~GG~ 166 (395)
T KOG2833|consen 105 KLHIASVNNFPTAAGLASSAAGFAALVLALARLYGLDDSPEELSRIARQG----SGSACR------SLYGGF 166 (395)
T ss_pred eEEEEecCCCcchhhhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHhcc----Cchhhh------hhhcce
Confidence 46777778999999999999999999999999999999999999998853 255553 899995
No 185
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.59 E-value=0.6 Score=51.73 Aligned_cols=97 Identities=16% Similarity=0.050 Sum_probs=62.2
Q ss_pred CCeEECCCC--CCHHHHHhhcCEEEecCC-hhHHHHHHHcCCcEEEEeCCCCCchH-HHHHHHHHcCcEEEEccCCCCcc
Q 002674 262 PNFIKLPKD--AYTPDFMAASDCMLGKIG-YGTVSEALAYKLPFVFVRRDYFNEEP-FLRNMLEFYQGGVEMIRRDLLTG 337 (894)
Q Consensus 262 ~nv~v~g~~--~~vp~ll~~~d~~I~~~G-~~t~~Eal~~G~P~l~ip~~~~~eq~-~na~~l~~~G~g~~~~~~~~~~~ 337 (894)
+.+.+.... .+..++|+.||.++..+. -+.++||++.|+|+.+++.+.-.... .-.+.|++.|+...++...-
T Consensus 209 ~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~~~~~--- 285 (311)
T PF06258_consen 209 PGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFTGWRD--- 285 (311)
T ss_pred CceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECCCccc---
Confidence 455444332 356799999999887665 46789999999999999976421111 23467788888776654211
Q ss_pred cHHHHHHHHHhcCCCccCCCCHHHHHHHHHHHHH
Q 002674 338 HWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 338 ~l~~~l~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (894)
+. . ...| ...+-+.++|++|.+.+
T Consensus 286 -~~----~----~~~~-~pl~et~r~A~~i~~r~ 309 (311)
T PF06258_consen 286 -LE----Q----WTPY-EPLDETDRVAAEIRERL 309 (311)
T ss_pred -cc----c----cccC-CCccHHHHHHHHHHHHh
Confidence 11 1 1111 25678888888887753
No 186
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=96.38 E-value=0.016 Score=66.92 Aligned_cols=122 Identities=11% Similarity=0.023 Sum_probs=78.8
Q ss_pred CCcEEEEEcCCCCCh---hhhHHh---hC--CC--CcEEEEeCCCCC---------C--CCCCeEECCCCC--CHHHHHh
Q 002674 222 DVKLLILNFGGQPAG---WKLKEE---YL--PS--GWKCLVCGASDS---------Q--LPPNFIKLPKDA--YTPDFMA 278 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~~---~~l~~~---Ll--~~--~~~~vv~G~~~~---------~--lp~nv~v~g~~~--~vp~ll~ 278 (894)
+.+..+++.|..... ..++++ +. .+ +..+++.|.+.. . ...+|.++|+++ .+..+++
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~ 307 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYK 307 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHh
Confidence 345678888887653 123333 21 12 344556676542 1 235688899875 3457775
Q ss_pred h--cCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 279 A--SDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 279 ~--~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
. +|+||..+ | .++++|||++|+|+|+...++.. +.+.+.+.|..+...+ +.+.+.++|.++++++
T Consensus 308 ~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~------e~i~~~~~G~l~~~~~-~~~~la~~I~~ll~~~ 378 (407)
T cd04946 308 ENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTP------EIVDNGGNGLLLSKDP-TPNELVSSLSKFIDNE 378 (407)
T ss_pred hcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcH------HHhcCCCcEEEeCCCC-CHHHHHHHHHHHHhCH
Confidence 4 78888654 2 36899999999999997754433 3455555788886532 3468999999998765
No 187
>COG1907 Predicted archaeal sugar kinases [General function prediction only]
Probab=96.35 E-value=0.016 Score=61.44 Aligned_cols=96 Identities=24% Similarity=0.386 Sum_probs=75.5
Q ss_pred CCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhHHhhcCCCCeEEEEE
Q 002674 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 709 (894)
Q Consensus 630 ~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~~~~~~~~ 709 (894)
.|++|.|.+.+|.-.||||-..+..|++.|+++++|+.++-++||...-+ |--||+ --++--+|| ..+|
T Consensus 70 ~gv~I~I~~~~P~HvGLGS~TQlaLa~a~ai~~i~gl~~~~~elA~~vgR------G~tSgi-Gv~afe~GG----FIVD 138 (312)
T COG1907 70 EGVKIEIRSDIPAHVGLGSTTQLALAVASAILEIYGLELSIRELAFAVGR------GGTSGI-GVYAFEYGG----FIVD 138 (312)
T ss_pred CceEEEEEecCchhcCCChHHHHHHHHHHHHHHHhcCCCCHHHHHHHHcc------CCccce-eEEEEEECC----EEEE
Confidence 58999999999999999999999999999999999999999988877654 555664 456777788 3445
Q ss_pred ec------C--Cc-eeEEeecCCCeEEEEEeCCCCc
Q 002674 710 CQ------P--AE-LLGVVEIPSHIRFWGIDSGIRH 736 (894)
Q Consensus 710 ~~------~--~~-~~~~v~~p~~~~~vv~~sgv~~ 736 (894)
-. | .. ..-...+|.+|.|+++=..++|
T Consensus 139 GGh~~~f~ps~~sP~I~R~dfPedW~~VlaIP~~~r 174 (312)
T COG1907 139 GGHSFGFLPSSASPLIFRLDFPEDWRFVLAIPEVER 174 (312)
T ss_pred CCcccCcccCCCCceeeeecCCCceEEEEEecCCCc
Confidence 21 1 11 1135677899999999888776
No 188
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism]
Probab=95.99 E-value=0.12 Score=55.58 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=42.8
Q ss_pred CCCCChHHHHHHHHHHHHHHHhCC----------CCCH---HHHHHHHHHHHHhhcCCCCChhhhHHhhcCCC
Q 002674 643 GKGVSSSASVEVASMSAIAAAHGL----------NIHP---RDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (894)
Q Consensus 643 g~GLgSSAAl~va~~~al~~l~~~----------~l~~---~~la~~a~~~E~~~~G~~~G~mDq~as~~G~~ 702 (894)
..|||||||++.++..++...+|. +++. +-+-.+||.+--.-+|+-+.+-|-.++++|..
T Consensus 152 KTGLGSSAam~T~lv~~ll~sl~~~~~d~~~k~~k~d~s~~~viHnlAQ~aHC~AQGKvGSGFDV~aA~yGS~ 224 (459)
T KOG4519|consen 152 KTGLGSSAAMTTALVAALLHSLGVVDLDDPCKEGKFDCSDLDVIHNLAQTAHCLAQGKVGSGFDVSAAVYGSQ 224 (459)
T ss_pred ccCccchHHHHHHHHHHHHHhhcceecCCCccccccCchHHHHHHHHHHHHHHHhcCCccCCcceehhhccce
Confidence 579999999999999777777653 1333 33445666655455676655579999999984
No 189
>PHA01630 putative group 1 glycosyl transferase
Probab=94.98 E-value=0.16 Score=56.98 Aligned_cols=90 Identities=13% Similarity=0.003 Sum_probs=53.0
Q ss_pred CcEEEEEcCCCCC--hh-hhHHh---hC--CCCcEEEEeCCCCCCC-CCCeE-ECCCC--CCHHHHHhhcCEEEecC---
Q 002674 223 VKLLILNFGGQPA--GW-KLKEE---YL--PSGWKCLVCGASDSQL-PPNFI-KLPKD--AYTPDFMAASDCMLGKI--- 287 (894)
Q Consensus 223 ~p~Vlvs~Gs~~~--~~-~l~~~---Ll--~~~~~~vv~G~~~~~l-p~nv~-v~g~~--~~vp~ll~~~d~~I~~~--- 287 (894)
.+++++..|.... +. .++++ +. .+++.+++.|.+.... -.++. +.++. +.++++|+.||+++..+
T Consensus 141 ~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l~~~~~~~~~v~~~~l~~~y~~aDv~v~pS~~E 220 (331)
T PHA01630 141 HPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRLFGLNGVKTPLPDDDIYSLFAGCDILFYPVRGG 220 (331)
T ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhhccccceeccCCHHHHHHHHHhCCEEEECCccc
Confidence 4555555555533 22 23332 22 2467788888543221 01211 11112 35678999999999642
Q ss_pred C-hhHHHHHHHcCCcEEEEeCCCCCc
Q 002674 288 G-YGTVSEALAYKLPFVFVRRDYFNE 312 (894)
Q Consensus 288 G-~~t~~Eal~~G~P~l~ip~~~~~e 312 (894)
| ..++.|||++|+|+|+....+..|
T Consensus 221 ~fgl~~lEAMA~G~PVIas~~gg~~E 246 (331)
T PHA01630 221 AFEIPVIEALALGLDVVVTEKGAWSE 246 (331)
T ss_pred cCChHHHHHHHcCCCEEEeCCCCchh
Confidence 2 468999999999999998655445
No 190
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=94.81 E-value=0.7 Score=50.86 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=51.1
Q ss_pred CCcEEEEeCCCCCC-----------CCCCeEECCCC--CCHHHHHhhcCEEEecCCh----hHHHHHHHcCCcEEEEeCC
Q 002674 246 SGWKCLVCGASDSQ-----------LPPNFIKLPKD--AYTPDFMAASDCMLGKIGY----GTVSEALAYKLPFVFVRRD 308 (894)
Q Consensus 246 ~~~~~vv~G~~~~~-----------lp~nv~v~g~~--~~vp~ll~~~d~~I~~~G~----~t~~Eal~~G~P~l~ip~~ 308 (894)
++.++++.|+++.. +.+.|.++|-+ +.+-+.|..-|+|+..+=. .++.||+.||+|+|....+
T Consensus 225 p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVG 304 (426)
T KOG1111|consen 225 PEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVG 304 (426)
T ss_pred CCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecC
Confidence 67889999887631 56788888765 3456899999999975422 4678999999999998876
Q ss_pred CCCc
Q 002674 309 YFNE 312 (894)
Q Consensus 309 ~~~e 312 (894)
+..|
T Consensus 305 GIpe 308 (426)
T KOG1111|consen 305 GIPE 308 (426)
T ss_pred Cccc
Confidence 6555
No 191
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=93.79 E-value=0.38 Score=53.92 Aligned_cols=109 Identities=14% Similarity=0.073 Sum_probs=70.3
Q ss_pred EEEEEcCCCCChhhhHHhhCCCCcEEEEeCCCCC--CCCCCeEECCCCC--CHHHHHhhcCE-EEecC--------Ch--
Q 002674 225 LLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDS--QLPPNFIKLPKDA--YTPDFMAASDC-MLGKI--------GY-- 289 (894)
Q Consensus 225 ~Vlvs~Gs~~~~~~l~~~Ll~~~~~~vv~G~~~~--~lp~nv~v~g~~~--~vp~ll~~~d~-~I~~~--------G~-- 289 (894)
.+++..|+.+.. ..+.. ..++++++++|.+.. ...+||++.|+.+ .++.+|+. |+ +|.-. .+
T Consensus 170 ~~i~yaG~l~k~-~~l~~-~~~~~~l~i~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~ 246 (333)
T PRK09814 170 KKINFAGNLEKS-PFLKN-WSQGIKLTVFGPNPEDLENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYK 246 (333)
T ss_pred ceEEEecChhhc-hHHHh-cCCCCeEEEECCCccccccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhh
Confidence 367777888743 22222 235678888887653 2567999998764 44566765 32 22211 11
Q ss_pred ----hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHH
Q 002674 290 ----GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (894)
Q Consensus 290 ----~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~l 346 (894)
+-+.|.|++|+|+|+.+. ...++.+++.++|+.++ + .+++.++++++
T Consensus 247 ~~~P~K~~~ymA~G~PVI~~~~------~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~ 297 (333)
T PRK09814 247 YNNPHKLSLYLAAGLPVIVWSK------AAIADFIVENGLGFVVD--S--LEELPEIIDNI 297 (333)
T ss_pred ccchHHHHHHHHCCCCEEECCC------ccHHHHHHhCCceEEeC--C--HHHHHHHHHhc
Confidence 237889999999998652 24577899999999987 2 24566666664
No 192
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=93.63 E-value=0.28 Score=47.25 Aligned_cols=97 Identities=27% Similarity=0.259 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHHhH
Q 002674 28 GHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSIL 107 (894)
Q Consensus 28 GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~ll 107 (894)
|--..+..++++|.++||+|++++..+...... ....++.+..+..... . .....+ ...
T Consensus 2 G~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~----~~~~~~------------~~~ 60 (160)
T PF13579_consen 2 GIERYVRELARALAARGHEVTVVTPQPDPEDDE-EEEDGVRVHRLPLPRR----P----WPLRLL------------RFL 60 (160)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S-EEETTEEEEEE--S-S----S----SGGGHC------------CHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc-cccCCceEEeccCCcc----c----hhhhhH------------HHH
Confidence 556678899999999999999998765322111 1112333332211100 0 000000 011
Q ss_pred HHHHHHH--hcCCCcEEEECCch---hHHHHHHHhCCcEEEEe
Q 002674 108 KDEVEWL--NSIKADLVVSDVVP---VACRAAADAGIRSVCVT 145 (894)
Q Consensus 108 ~~~~~~L--~~~~PDlVV~D~~~---~a~~aA~~lgIP~V~is 145 (894)
....+++ +..+||+|++.... .+.++.+..++|.|...
T Consensus 61 ~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 61 RRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp HHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred HHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 2234455 78899999987632 23333347799998764
No 193
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=93.62 E-value=0.92 Score=43.30 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=56.2
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHH
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~ 97 (894)
|++..... .+| ...+++.|.++||+|++++..... .......++.+... +.+ ... ...+.
T Consensus 2 Il~i~~~~-~~~---~~~~~~~L~~~g~~V~ii~~~~~~--~~~~~~~~i~~~~~--~~~--------~k~---~~~~~- 61 (139)
T PF13477_consen 2 ILLIGNTP-STF---IYNLAKELKKRGYDVHIITPRNDY--EKYEIIEGIKVIRL--PSP--------RKS---PLNYI- 61 (139)
T ss_pred EEEEecCc-HHH---HHHHHHHHHHCCCEEEEEEcCCCc--hhhhHhCCeEEEEe--cCC--------CCc---cHHHH-
Confidence 45554433 234 567899999999999999975432 11111123333322 100 000 01111
Q ss_pred HhhcchHHhHHHHHHHHhcCCCcEEEECC-c---hhHHHHHHHhC-CcEEEE
Q 002674 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV-V---PVACRAAADAG-IRSVCV 144 (894)
Q Consensus 98 ~~~~~~~~ll~~~~~~L~~~~PDlVV~D~-~---~~a~~aA~~lg-IP~V~i 144 (894)
.. ....+++++.+||+|+++. . ..+.++++..+ +|.+..
T Consensus 62 -------~~-~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 62 -------KY-FRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred -------HH-HHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 11 2446789999999999875 2 23456677888 888754
No 194
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=93.36 E-value=5.7 Score=44.67 Aligned_cols=93 Identities=14% Similarity=0.262 Sum_probs=56.0
Q ss_pred HHHHhCCCCCCcEEEEEcCCC-CC-h-h------hhHHhhCCCCcEEEEeCCCCCC---------CCC----CeE-ECCC
Q 002674 213 VRKELGIEDDVKLLILNFGGQ-PA-G-W------KLKEEYLPSGWKCLVCGASDSQ---------LPP----NFI-KLPK 269 (894)
Q Consensus 213 ~r~~lgl~~~~p~Vlvs~Gs~-~~-~-~------~l~~~Ll~~~~~~vv~G~~~~~---------lp~----nv~-v~g~ 269 (894)
....+++.+++++|++..|+. +. + + ++.+.+...++.++++|...+. ++. ++. ..|.
T Consensus 170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~ 249 (348)
T PRK10916 170 TCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGE 249 (348)
T ss_pred HHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCC
Confidence 344455545678888888874 22 2 2 2333444456777777654321 221 222 2332
Q ss_pred CC--CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 270 DA--YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 270 ~~--~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
.+ .+..+|+.||+|||.-. |.+.=|.+.|+|+|++=
T Consensus 250 ~sL~el~ali~~a~l~I~nDT-Gp~HlAaA~g~P~valf 287 (348)
T PRK10916 250 TQLEQAVILIAACKAIVTNDS-GLMHVAAALNRPLVALY 287 (348)
T ss_pred CCHHHHHHHHHhCCEEEecCC-hHHHHHHHhCCCEEEEE
Confidence 22 22367889999999644 67778899999999874
No 195
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=92.46 E-value=1.1 Score=45.10 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=30.7
Q ss_pred HHHHHHhcCCCcEEEECC---chhHHHHHHHh------CCcEEEEecCc
Q 002674 109 DEVEWLNSIKADLVVSDV---VPVACRAAADA------GIRSVCVTNFS 148 (894)
Q Consensus 109 ~~~~~L~~~~PDlVV~D~---~~~a~~aA~~l------gIP~V~isn~~ 148 (894)
....++.+.+||+||+.. ..+.+++|+.+ |.++|.+..+.
T Consensus 83 ~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~a 131 (170)
T PF08660_consen 83 QSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFA 131 (170)
T ss_pred HHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeee
Confidence 446677888999999875 44567788888 99999985543
No 196
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=92.42 E-value=3.8 Score=43.43 Aligned_cols=88 Identities=18% Similarity=0.129 Sum_probs=53.3
Q ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchHHhH
Q 002674 28 GHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSIL 107 (894)
Q Consensus 28 GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~~ll 107 (894)
|...=+..|++.|...++.+++.+..... .+..+. +.+. .-.|+ .-.
T Consensus 9 GGT~Dar~la~~L~~~~~~~~~ss~t~~g--~~l~~~----~~~~-~~~G~--------------------------l~~ 55 (257)
T COG2099 9 GGTSDARALAKKLAAAPVDIILSSLTGYG--AKLAEQ----IGPV-RVGGF--------------------------LGA 55 (257)
T ss_pred eccHHHHHHHHHhhccCccEEEEEccccc--ccchhc----cCCe-eecCc--------------------------CCH
Confidence 56778899999999998777777654311 010000 0000 00010 011
Q ss_pred HHHHHHHhcCCCcEEE-ECCchh------HHHHHHHhCCcEEEEecCc
Q 002674 108 KDEVEWLNSIKADLVV-SDVVPV------ACRAAADAGIRSVCVTNFS 148 (894)
Q Consensus 108 ~~~~~~L~~~~PDlVV-~D~~~~------a~~aA~~lgIP~V~isn~~ 148 (894)
+...++|++.+.|+|| ..++++ ++.+|+..|||++.+..-.
T Consensus 56 e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eRP~ 103 (257)
T COG2099 56 EGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRLERPP 103 (257)
T ss_pred HHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEECCc
Confidence 3346789999999999 455554 3567888999998875444
No 197
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism]
Probab=91.93 E-value=0.13 Score=53.69 Aligned_cols=54 Identities=19% Similarity=0.350 Sum_probs=46.1
Q ss_pred CCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 002674 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENH 683 (894)
Q Consensus 630 ~G~~i~i~s~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~ 683 (894)
.+-.+.+..-||.|+|+|||++..++.+...++...+.+++-.+...+..+|++
T Consensus 93 ~~Tk~hvtNPiplgrGigssgta~~aGv~l~ne~a~LGlsk~~mldy~lmierh 146 (355)
T KOG1537|consen 93 ITTKKHVTNPIPLGRGIGSSGTAKMAGVRLVNESADLGLSKGSMLDYSLMIERH 146 (355)
T ss_pred cceeeeecCCccccccccchhhhhhhhheecchHhhcCCccccchhHHHHHhhC
Confidence 356788889999999999999999999999898888888888777777776664
No 198
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=91.58 E-value=18 Score=40.43 Aligned_cols=83 Identities=23% Similarity=0.440 Sum_probs=54.3
Q ss_pred CcEEEEEcC-CCCCh--h------hhHHhhCCCCcEEEEeCCCCCC---------CCCCeEECCCCC--CHHHHHhhcCE
Q 002674 223 VKLLILNFG-GQPAG--W------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFIKLPKDA--YTPDFMAASDC 282 (894)
Q Consensus 223 ~p~Vlvs~G-s~~~~--~------~l~~~Ll~~~~~~vv~G~~~~~---------lp~nv~v~g~~~--~vp~ll~~~d~ 282 (894)
+|+|++..| +.+.. + ++.+.+...+++++++|...+. .+..+.+.+... .+..+++.||+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 688999988 55331 2 2333455566888888765421 222222444432 34478889999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEe
Q 002674 283 MLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 283 ~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
||+.-. |-+.=|.+.|+|+|++-
T Consensus 255 ~I~~DS-g~~HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS-GPMHLAAALGTPTIALY 277 (334)
T ss_pred EEccCC-hHHHHHHHcCCCEEEEE
Confidence 999644 67777889999999986
No 199
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=91.58 E-value=22 Score=38.22 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=31.3
Q ss_pred CCCeEEC--CCCCCHH-HHHhh--cCEEEec--CChhH----HHHHHHcCCcEEEEeCCC
Q 002674 261 PPNFIKL--PKDAYTP-DFMAA--SDCMLGK--IGYGT----VSEALAYKLPFVFVRRDY 309 (894)
Q Consensus 261 p~nv~v~--g~~~~vp-~ll~~--~d~~I~~--~G~~t----~~Eal~~G~P~l~ip~~~ 309 (894)
+.|+... +|...+. .++.+ +|++||+ ||.|. +.-|..+|+|+|+|.++.
T Consensus 174 ~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 174 SDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred hhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 3555432 4444344 46654 9999997 22222 445778899999999874
No 200
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=90.79 E-value=2.3 Score=41.56 Aligned_cols=28 Identities=32% Similarity=0.445 Sum_probs=22.5
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 27 FGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 27 ~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
.|--.-+..|+++|.++||+|++++...
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4667777899999999999999998653
No 201
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=90.02 E-value=38 Score=38.15 Aligned_cols=84 Identities=10% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCcEEEEEcCCCCC-h-h------hhHHhhCCCCcEEEEeCC-CCCC------C----C-CCe-EECCCCC--CHHHHHh
Q 002674 222 DVKLLILNFGGQPA-G-W------KLKEEYLPSGWKCLVCGA-SDSQ------L----P-PNF-IKLPKDA--YTPDFMA 278 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~-~-~------~l~~~Ll~~~~~~vv~G~-~~~~------l----p-~nv-~v~g~~~--~vp~ll~ 278 (894)
++++|++..|+... + + ++.+.|...++.++++|. +..+ + . .++ ...|..+ .+..+|+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 35778888876533 1 2 233344445677777654 3211 1 1 122 2334332 3346888
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 279 ~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
.||+||+.-. |.+.=|.+.|+|+|++=
T Consensus 262 ~a~l~v~nDS-Gp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 262 HAQLFIGVDS-APAHIAAAVNTPLICLF 288 (352)
T ss_pred hCCEEEecCC-HHHHHHHHcCCCEEEEE
Confidence 9999999755 67777889999999874
No 202
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.64 E-value=2.7 Score=44.50 Aligned_cols=85 Identities=21% Similarity=0.192 Sum_probs=53.9
Q ss_pred HHHHhhcCEEEecCC-hhHHHHHHHcCCcEEEEeCCCCC-chH-HHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 274 PDFMAASDCMLGKIG-YGTVSEALAYKLPFVFVRRDYFN-EEP-FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 274 p~ll~~~d~~I~~~G-~~t~~Eal~~G~P~l~ip~~~~~-eq~-~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
+++|++||.+|+..- -+.++||++.|+|+-..-.+.+. .-+ .-.+.|++.+++...+...+ ++++..
T Consensus 239 ~~~La~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~-------~~e~ys--- 308 (329)
T COG3660 239 IDMLAAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNL-------ALEEYS--- 308 (329)
T ss_pred HHHHhhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchh-------hhcccc---
Confidence 489999999987654 47789999999999887644442 111 22344666666655543222 122221
Q ss_pred CCccCCCCHHHHHHHHHHHHH
Q 002674 351 PCYEGGINGGEVAAHILQETA 371 (894)
Q Consensus 351 ~~~~~~~~g~~~~A~~i~~~l 371 (894)
| ...+-.+++|..|...+
T Consensus 309 --y-~PLnEt~RiA~~Ira~l 326 (329)
T COG3660 309 --Y-KPLNETERIAEEIRAEL 326 (329)
T ss_pred --c-CCchHHHHHHHHHHHHh
Confidence 1 35678888888887654
No 203
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=89.17 E-value=35 Score=36.59 Aligned_cols=151 Identities=19% Similarity=0.180 Sum_probs=79.7
Q ss_pred HHHHHhcCCCcEEE-ECCchh------HHHHHHHhCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceee
Q 002674 110 EVEWLNSIKADLVV-SDVVPV------ACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLI 182 (894)
Q Consensus 110 ~~~~L~~~~PDlVV-~D~~~~------a~~aA~~lgIP~V~isn~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~~~ll 182 (894)
..++|++.++++|| ..|+|+ +..+++.+|||++.+..-.|... .+
T Consensus 58 l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eRp~~~~~---------------------~~------- 109 (249)
T PF02571_consen 58 LAEFLRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFERPSWQPE---------------------PD------- 109 (249)
T ss_pred HHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEcCCcccC---------------------CC-------
Confidence 45678889999999 455554 34567888999987643332100 00
Q ss_pred ecCCCCCCCCCCceeecCcccccCccChHHHHHHhCCCCCCcEEEEEcCCCCChhhhHHhhCCCCcEEE--EeCCCCCC-
Q 002674 183 RLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCL--VCGASDSQ- 259 (894)
Q Consensus 183 ~~p~~~~~p~~~~v~~vp~~~~~~~~~~~e~r~~lgl~~~~p~Vlvs~Gs~~~~~~l~~~Ll~~~~~~v--v~G~~~~~- 259 (894)
.+.+.+ .+-+++-+.+.- .....||++.|+...+ .+.. ....+.+++ +.-.....
T Consensus 110 -----------~~~~~v--------~~~~eA~~~l~~-~~~~~iflttGsk~L~-~f~~-~~~~~~r~~~RvLp~~~~~~ 167 (249)
T PF02571_consen 110 -----------DNWHYV--------DSYEEAAELLKE-LGGGRIFLTTGSKNLP-PFVP-APLPGERLFARVLPTPESAL 167 (249)
T ss_pred -----------CeEEEe--------CCHHHHHHHHhh-cCCCCEEEeCchhhHH-HHhh-cccCCCEEEEEECCCccccC
Confidence 001111 111233333311 1224699999977654 3332 111222222 22111112
Q ss_pred -C-CCCeEEC--CCCCCHH-HHHhh--cCEEEecC-ChhH----HHHHHHcCCcEEEEeCCCC
Q 002674 260 -L-PPNFIKL--PKDAYTP-DFMAA--SDCMLGKI-GYGT----VSEALAYKLPFVFVRRDYF 310 (894)
Q Consensus 260 -l-p~nv~v~--g~~~~vp-~ll~~--~d~~I~~~-G~~t----~~Eal~~G~P~l~ip~~~~ 310 (894)
+ +.|+... +|...+. .++.. +|++||+- |... +.-|..+|+|+|+|-++..
T Consensus 168 g~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~ 230 (249)
T PF02571_consen 168 GFPPKNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE 230 (249)
T ss_pred CCChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC
Confidence 2 3455432 4444444 45554 99999983 3222 4457889999999998743
No 204
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.16 E-value=0.94 Score=53.08 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=51.6
Q ss_pred CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCc----EEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHH
Q 002674 272 YTPDFMAASDCMLGKI---GY-GTVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~---G~-~t~~Eal~~G~P----~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l 343 (894)
.++.+++.+|+|+..+ |+ .+..|+|++|+| +|+....+..++ + +.|+.+++.|. +.+.++|
T Consensus 348 el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~------l---~~gllVnP~d~--~~lA~aI 416 (456)
T TIGR02400 348 ELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE------L---NGALLVNPYDI--DGMADAI 416 (456)
T ss_pred HHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH------h---CCcEEECCCCH--HHHHHHH
Confidence 4567899999999764 54 478899999999 887765544443 3 25788888774 5889999
Q ss_pred HHHHhcC
Q 002674 344 ERAISLK 350 (894)
Q Consensus 344 ~~ll~~~ 350 (894)
.++++++
T Consensus 417 ~~aL~~~ 423 (456)
T TIGR02400 417 ARALTMP 423 (456)
T ss_pred HHHHcCC
Confidence 9998765
No 205
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=87.03 E-value=2.9 Score=43.06 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=25.0
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|+||... --|. +..-..+|+++|++.||+|+++.+..
T Consensus 1 M~ILlTN-DDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTN-DDGI-DAPGIRALAKALSALGHDVVVVAPDS 37 (196)
T ss_dssp SEEEEE--SS-T-TSHHHHHHHHHHTTTSSEEEEEEESS
T ss_pred CeEEEEc-CCCC-CCHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 4565443 3443 45556789999988789999998654
No 206
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=86.08 E-value=49 Score=36.99 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCCC-h-h------hhHHhhCCCCcEEEEeCCCC--C-----C----CC-CCeE-ECCCCC--CHHHHHh
Q 002674 222 DVKLLILNFGGQPA-G-W------KLKEEYLPSGWKCLVCGASD--S-----Q----LP-PNFI-KLPKDA--YTPDFMA 278 (894)
Q Consensus 222 ~~p~Vlvs~Gs~~~-~-~------~l~~~Ll~~~~~~vv~G~~~--~-----~----lp-~nv~-v~g~~~--~vp~ll~ 278 (894)
++++|++..|+... + + ++.+.+...++.+++.|... + + .+ +++. ..|..+ .+..+++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 259 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID 259 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence 45778888776533 1 2 23334444567777776432 1 1 12 2232 233322 2346788
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 279 ~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
.||+|||.-. |.+.=|.+.|+|+|++=
T Consensus 260 ~a~l~Vs~DS-Gp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 260 HARLFIGVDS-VPMHMAAALGTPLVALF 286 (344)
T ss_pred hCCEEEecCC-HHHHHHHHcCCCEEEEE
Confidence 9999999744 77888999999999984
No 207
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=84.63 E-value=7.9 Score=43.00 Aligned_cols=81 Identities=15% Similarity=0.129 Sum_probs=61.4
Q ss_pred CCeEECCCCCCHH-----HHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccC
Q 002674 262 PNFIKLPKDAYTP-----DFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (894)
Q Consensus 262 ~nv~v~g~~~~vp-----~ll~~~d~~I~~----~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~ 332 (894)
+|+.++. ++|| .+|+.||+.|-. -|.|+++=.+.+|+|+++-... .--+.+.+.|+-+....+
T Consensus 245 ~~~~iL~--e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~n------p~~~~l~~~~ipVlf~~d 316 (360)
T PF07429_consen 245 ENFQILT--EFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDN------PFWQDLKEQGIPVLFYGD 316 (360)
T ss_pred cceeEhh--hhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCC------hHHHHHHhCCCeEEeccc
Confidence 4777653 3444 577889998864 4889999999999999976522 234668899999999989
Q ss_pred CCCcccHHHHHHHHHhcC
Q 002674 333 DLLTGHWKPYLERAISLK 350 (894)
Q Consensus 333 ~~~~~~l~~~l~~ll~~~ 350 (894)
+++...++++=+++....
T Consensus 317 ~L~~~~v~ea~rql~~~d 334 (360)
T PF07429_consen 317 ELDEALVREAQRQLANVD 334 (360)
T ss_pred cCCHHHHHHHHHHHhhCc
Confidence 998888887777776544
No 208
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=84.46 E-value=1.5 Score=51.06 Aligned_cols=114 Identities=15% Similarity=0.150 Sum_probs=54.4
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCC-hhhhHH---hhC--CCCcEEEE-eCCCCC-C----------C-CCCeEECCCCCCH
Q 002674 213 VRKELGIEDDVKLLILNFGGQPA-GWKLKE---EYL--PSGWKCLV-CGASDS-Q----------L-PPNFIKLPKDAYT 273 (894)
Q Consensus 213 ~r~~lgl~~~~p~Vlvs~Gs~~~-~~~l~~---~Ll--~~~~~~vv-~G~~~~-~----------l-p~nv~v~g~~~~v 273 (894)
.|..+|++++. ++|.+|..... ..+.+. +++ -|+-++++ ..+... . + ++.+.+.+... .
T Consensus 275 ~R~~~gLp~d~-vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~-~ 352 (468)
T PF13844_consen 275 TRAQYGLPEDA-VVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP-R 352 (468)
T ss_dssp ETGGGT--SSS-EEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE----H
T ss_pred CHHHcCCCCCc-eEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC-H
Confidence 35678887654 67888765433 112222 222 14444433 332211 0 2 45677665432 2
Q ss_pred HHHH---hhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002674 274 PDFM---AASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (894)
Q Consensus 274 p~ll---~~~d~~I~~---~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~ 329 (894)
.++| ..+|+++=. +|.+|++||+++|+|+|.++-..+ -...-+..|...|+.-.+
T Consensus 353 ~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~-~sR~~aSiL~~lGl~ElI 413 (468)
T PF13844_consen 353 EEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETM-ASRVGASILRALGLPELI 413 (468)
T ss_dssp HHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSG-GGSHHHHHHHHHT-GGGB
T ss_pred HHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCc-hhHHHHHHHHHcCCchhc
Confidence 3444 469999943 577999999999999999983322 223556778888876433
No 209
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=84.24 E-value=8.7 Score=42.12 Aligned_cols=79 Identities=22% Similarity=0.137 Sum_probs=57.4
Q ss_pred CCeEECCCCCCHH-----HHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccC
Q 002674 262 PNFIKLPKDAYTP-----DFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (894)
Q Consensus 262 ~nv~v~g~~~~vp-----~ll~~~d~~I~~----~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~ 332 (894)
+++.++. +.|| .+|+.||+.|-. -|.||++=.+.+|+|+++-....+ -+.+.+.|+-+..+.+
T Consensus 206 ~~~~~L~--e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~f------wqdl~e~gv~Vlf~~d 277 (322)
T PRK02797 206 ENFQILT--EKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPF------WQDLTEQGLPVLFTGD 277 (322)
T ss_pred ccEEehh--hhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCch------HHHHHhCCCeEEecCC
Confidence 6888663 3444 578899997764 488999999999999997652222 2348889999988888
Q ss_pred CCCcccHHHHHHHHHh
Q 002674 333 DLLTGHWKPYLERAIS 348 (894)
Q Consensus 333 ~~~~~~l~~~l~~ll~ 348 (894)
.++...+.++=+++..
T Consensus 278 ~L~~~~v~e~~rql~~ 293 (322)
T PRK02797 278 DLDEDIVREAQRQLAS 293 (322)
T ss_pred cccHHHHHHHHHHHHh
Confidence 8876666665455443
No 210
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=82.86 E-value=5.4 Score=46.86 Aligned_cols=111 Identities=19% Similarity=0.135 Sum_probs=67.1
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh-hhhHH-h--hCC--CCcEEEEe-CCCCCC-------------C-CCCeEECCCCCC
Q 002674 214 RKELGIEDDVKLLILNFGGQPAG-WKLKE-E--YLP--SGWKCLVC-GASDSQ-------------L-PPNFIKLPKDAY 272 (894)
Q Consensus 214 r~~lgl~~~~p~Vlvs~Gs~~~~-~~l~~-~--Ll~--~~~~~vv~-G~~~~~-------------l-p~nv~v~g~~~~ 272 (894)
|..+|++++ -+||++|++...- .+++. + ++. |+-.+++. |..+++ + ++.+++++....
T Consensus 421 R~~lglp~~-avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 421 RAQLGLPED-AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred hhhcCCCCC-eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 456788654 5789998865541 23333 2 221 44344443 322221 1 466777775543
Q ss_pred HHH---HHhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCchHH--H-HHHHHHcCcEEEEc
Q 002674 273 TPD---FMAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPF--L-RNMLEFYQGGVEMI 330 (894)
Q Consensus 273 vp~---ll~~~d~~I~~---~G~~t~~Eal~~G~P~l~ip~~~~~eq~~--n-a~~l~~~G~g~~~~ 330 (894)
++ .+..+|+|+-. +|.+|..|++.+|+|||..+ ++|+. | +..+...|.-..+-
T Consensus 500 -~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~----G~~FasR~~~si~~~agi~e~vA 561 (620)
T COG3914 500 -EDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV----GEQFASRNGASIATNAGIPELVA 561 (620)
T ss_pred -HHHHHhhchhheeeecccCCCccchHHHHHhcCceeeec----cHHHHHhhhHHHHHhcCCchhhc
Confidence 33 34569999965 78899999999999999876 56642 2 24445666654443
No 211
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=82.13 E-value=77 Score=33.99 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=26.5
Q ss_pred HHHHHhcCCCcEEE-ECCchh------HHHHHHHhCCcEEEEec
Q 002674 110 EVEWLNSIKADLVV-SDVVPV------ACRAAADAGIRSVCVTN 146 (894)
Q Consensus 110 ~~~~L~~~~PDlVV-~D~~~~------a~~aA~~lgIP~V~isn 146 (894)
..++|++.++++|| ..|+|+ +..+++.+|||.+.+..
T Consensus 57 l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 57 LAAYLREEGIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 35678889999999 445554 34567788999987643
No 212
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=82.00 E-value=1.1 Score=52.73 Aligned_cols=69 Identities=17% Similarity=0.156 Sum_probs=50.1
Q ss_pred CCHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCc----EEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHH
Q 002674 271 AYTPDFMAASDCMLGKI---GY-GTVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPY 342 (894)
Q Consensus 271 ~~vp~ll~~~d~~I~~~---G~-~t~~Eal~~G~P----~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~ 342 (894)
+.++.+|+.||+||..+ |+ .++.|||++|+| +|+....+..++ ...|+.+++.+. +.+.++
T Consensus 352 ~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---------~~~g~lv~p~d~--~~la~a 420 (460)
T cd03788 352 EELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---------LSGALLVNPYDI--DEVADA 420 (460)
T ss_pred HHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---------cCCCEEECCCCH--HHHHHH
Confidence 35668999999999753 54 467899999999 665544443333 234778887764 588999
Q ss_pred HHHHHhcC
Q 002674 343 LERAISLK 350 (894)
Q Consensus 343 l~~ll~~~ 350 (894)
|.++++++
T Consensus 421 i~~~l~~~ 428 (460)
T cd03788 421 IHRALTMP 428 (460)
T ss_pred HHHHHcCC
Confidence 99998765
No 213
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.56 E-value=2.7 Score=45.36 Aligned_cols=76 Identities=13% Similarity=0.161 Sum_probs=50.9
Q ss_pred CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCch--HHHHHH-HHHcCcEEEEccCCCCcccHHHHHHHHHh
Q 002674 272 YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE--PFLRNM-LEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq--~~na~~-l~~~G~g~~~~~~~~~~~~l~~~l~~ll~ 348 (894)
.+.|+|.++|+.|+.+| ..+-.++-.|||+|.+| +.+-| +.-|++ ..-.|..+.+-..... .-....++++.
T Consensus 304 sfadiLH~adaalgmAG-TAtEQavGLGkPvi~fP--g~GPQy~pgFA~rQ~rLLG~sltlv~~~aq--~a~~~~q~ll~ 378 (412)
T COG4370 304 SFADILHAADAALGMAG-TATEQAVGLGKPVIGFP--GQGPQYNPGFAERQQRLLGASLTLVRPEAQ--AAAQAVQELLG 378 (412)
T ss_pred HHHHHHHHHHHHHHhcc-chHHHhhccCCceeecC--CCCCCcChHHHHHHHHHhcceeeecCCchh--hHHHHHHHHhc
Confidence 35699999999999999 77788999999999999 44444 233332 2346777766544322 22334445887
Q ss_pred cCCC
Q 002674 349 LKPC 352 (894)
Q Consensus 349 ~~~~ 352 (894)
++.+
T Consensus 379 dp~r 382 (412)
T COG4370 379 DPQR 382 (412)
T ss_pred ChHH
Confidence 7743
No 214
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=81.11 E-value=8 Score=45.47 Aligned_cols=137 Identities=20% Similarity=0.251 Sum_probs=86.4
Q ss_pred hHHHHHHhCCCCCCc-EEEEEcCCCCCh--hh----hHHhhCCCCcEEEEeCCCCCC-----------CCCCeEE-CCCC
Q 002674 210 RKEVRKELGIEDDVK-LLILNFGGQPAG--WK----LKEEYLPSGWKCLVCGASDSQ-----------LPPNFIK-LPKD 270 (894)
Q Consensus 210 ~~e~r~~lgl~~~~p-~Vlvs~Gs~~~~--~~----l~~~Ll~~~~~~vv~G~~~~~-----------lp~nv~v-~g~~ 270 (894)
+..+.+.+|++.+.+ .++...|..... .+ .+..++...|++++.|.+... .+.++.+ .+|.
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~ 358 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYD 358 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeec
Confidence 345677888875433 456666666552 22 222345566888888877532 3555543 4554
Q ss_pred CCHH-HHHhhcCEEEec-----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH--HHHcCcEEEEccCCCCcccHHHH
Q 002674 271 AYTP-DFMAASDCMLGK-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM--LEFYQGGVEMIRRDLLTGHWKPY 342 (894)
Q Consensus 271 ~~vp-~ll~~~d~~I~~-----~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~--l~~~G~g~~~~~~~~~~~~l~~~ 342 (894)
..+. .+++.+|+++-. +| .|-+++|.+|.+-|+-+.++-.|-.....- ....|.|..+... +++++..+
T Consensus 359 ~~la~~i~agaD~~lmPSrfEPcG-L~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~--~~~~l~~a 435 (487)
T COG0297 359 EPLAHLIYAGADVILMPSRFEPCG-LTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQT--NPDHLANA 435 (487)
T ss_pred HHHHHHHHhcCCEEEeCCcCcCCc-HHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecC--CHHHHHHH
Confidence 4333 677889999965 46 788999999998888887665553211111 2345677777654 56788888
Q ss_pred HHHHHhc
Q 002674 343 LERAISL 349 (894)
Q Consensus 343 l~~ll~~ 349 (894)
|.+.+..
T Consensus 436 l~rA~~~ 442 (487)
T COG0297 436 LRRALVL 442 (487)
T ss_pred HHHHHHH
Confidence 8887643
No 215
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=80.94 E-value=9.9 Score=42.41 Aligned_cols=93 Identities=16% Similarity=0.372 Sum_probs=58.3
Q ss_pred HHHHhCCCCCCcEEEEEcCCC-CC-h-h------hhHHhhCCCCcEEEEeCCCCCC---------CCCCeE-ECCCCC--
Q 002674 213 VRKELGIEDDVKLLILNFGGQ-PA-G-W------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFI-KLPKDA-- 271 (894)
Q Consensus 213 ~r~~lgl~~~~p~Vlvs~Gs~-~~-~-~------~l~~~Ll~~~~~~vv~G~~~~~---------lp~nv~-v~g~~~-- 271 (894)
+...++++.++|+|++..|+. +. + + ++.+.+...++.++++|...+. .+.++. ..+..+
T Consensus 164 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~ 243 (334)
T TIGR02195 164 ALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLD 243 (334)
T ss_pred HHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHH
Confidence 445666666678898888874 33 1 2 2333444456777777764321 233332 233221
Q ss_pred CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 272 YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
.+..+|+.||+||+.-. |.+.=|.+.|+|+|++=
T Consensus 244 el~ali~~a~l~I~~DS-Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 244 EAVDLIALAKAVVTNDS-GLMHVAAALNRPLVALY 277 (334)
T ss_pred HHHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEE
Confidence 23468889999999654 67777889999999884
No 216
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=75.97 E-value=21 Score=38.37 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=32.6
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~ 55 (894)
|+++....|.|..+-+.++|..+++.|+.|.++...+.
T Consensus 2 ~~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 2 YIFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCc
Confidence 45566777899999999999999999999999987663
No 217
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=75.47 E-value=18 Score=40.25 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCcEEEECCch--------hHHH---HHHHhCCcEEEE
Q 002674 108 KDEVEWLNSIKADLVVSDVVP--------VACR---AAADAGIRSVCV 144 (894)
Q Consensus 108 ~~~~~~L~~~~PDlVV~D~~~--------~a~~---aA~~lgIP~V~i 144 (894)
.+..+++++.+||+||....| |+.+ +.+.++||+|+-
T Consensus 70 ~~i~~mv~~~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 70 KKILEMVKKLKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 455778899999999976422 2222 345789999864
No 218
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=75.15 E-value=14 Score=40.81 Aligned_cols=89 Identities=24% Similarity=0.325 Sum_probs=51.7
Q ss_pred hCCCCCCcEEEEEcCCCCC-h-h------hhHHhhCCCCcEEEEe-CCCCC-C----C---CCCeEECCCCC--CHHHHH
Q 002674 217 LGIEDDVKLLILNFGGQPA-G-W------KLKEEYLPSGWKCLVC-GASDS-Q----L---PPNFIKLPKDA--YTPDFM 277 (894)
Q Consensus 217 lgl~~~~p~Vlvs~Gs~~~-~-~------~l~~~Ll~~~~~~vv~-G~~~~-~----l---p~nv~v~g~~~--~vp~ll 277 (894)
++...++++|++..|+... + + ++.+.+...++.++++ |...+ + + -++..+.+..+ .+..++
T Consensus 173 ~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali 252 (319)
T TIGR02193 173 LGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALL 252 (319)
T ss_pred hhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHH
Confidence 3333356777777775433 1 2 2333444456777766 53321 1 1 12233344332 223677
Q ss_pred hhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 278 AASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
+.||++||.-. +.+.=|.+.|+|+|++=
T Consensus 253 ~~a~l~I~~DS-gp~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 253 AGADAVVGVDT-GLTHLAAALDKPTVTLY 280 (319)
T ss_pred HcCCEEEeCCC-hHHHHHHHcCCCEEEEE
Confidence 89999999644 67777888999999884
No 219
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.95 E-value=6.1 Score=42.75 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=36.8
Q ss_pred CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC
Q 002674 262 PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY 309 (894)
Q Consensus 262 ~nv~v~g~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~ 309 (894)
.++.++.....+.++|.+||.+||-.+ ++-.||+.+|+|++++-.+.
T Consensus 182 ~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~~~ 228 (269)
T PF05159_consen 182 PNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGRAF 228 (269)
T ss_pred CCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecCcc
Confidence 344444433467799999999999877 78899999999999987543
No 220
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=73.72 E-value=25 Score=39.13 Aligned_cols=40 Identities=20% Similarity=0.371 Sum_probs=33.1
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~ 55 (894)
++|+||.--.|.|=.+-+.+.|-.|++.|..|.+++..|.
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPA 41 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPA 41 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCC
Confidence 3566677677799999999999999999988888887764
No 221
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=73.40 E-value=21 Score=39.47 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=33.1
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~ 55 (894)
|+++|+.--.|.|=.+-+.++|-+++++|++|.+++..|.
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPA 40 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTT
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCC
Confidence 4566677677799999999999999999999999998874
No 222
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=72.65 E-value=8.9 Score=41.06 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=71.2
Q ss_pred EEEEEcCCCCCh---hhhHHh---hCC--CCcEEEEeCCCCC-------C-----CCCCeEECCCCC--CHHHHHhhcCE
Q 002674 225 LLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDS-------Q-----LPPNFIKLPKDA--YTPDFMAASDC 282 (894)
Q Consensus 225 ~Vlvs~Gs~~~~---~~l~~~---Ll~--~~~~~vv~G~~~~-------~-----lp~nv~v~g~~~--~vp~ll~~~d~ 282 (894)
.++++.|..... ..+.+. +.. +++.++++|.... . ...++...++.+ .+..++..+|+
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 279 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADV 279 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCE
Confidence 577777775441 122222 222 2256777776543 1 236777777765 45578888999
Q ss_pred EEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 283 MLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 283 ~I~~~---G~-~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
++... |. .++.|++++|+|+|..+.+... +.+...+.|...... ..+.+..++..++++.
T Consensus 280 ~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~------e~~~~~~~g~~~~~~--~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 280 FVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIP------EVVEDGETGLLVPPG--DVEELADALEQLLEDP 343 (381)
T ss_pred EEeccccccchHHHHHHHhcCCcEEECCCCChH------HHhcCCCceEecCCC--CHHHHHHHHHHHhcCH
Confidence 99772 44 3469999999999988754322 223333345544333 2457777888877554
No 223
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=71.27 E-value=6.5 Score=49.44 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=50.0
Q ss_pred HHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHH
Q 002674 273 TPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (894)
Q Consensus 273 vp~ll~~~d~~I~~~---G~~-t~~Eal~~G~P----~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~ 344 (894)
++.+|+.||+|+..+ |+| +..|+|++|+| +|+-...+..++ + ...|+.+++.|. +.+.++|.
T Consensus 369 l~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~------l--~~~allVnP~D~--~~lA~AI~ 438 (797)
T PLN03063 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS------L--GAGALLVNPWNI--TEVSSAIK 438 (797)
T ss_pred HHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh------h--cCCeEEECCCCH--HHHHHHHH
Confidence 347889999999865 765 67799999999 555544444343 2 125889998875 58999999
Q ss_pred HHHhcC
Q 002674 345 RAISLK 350 (894)
Q Consensus 345 ~ll~~~ 350 (894)
++|+.+
T Consensus 439 ~aL~m~ 444 (797)
T PLN03063 439 EALNMS 444 (797)
T ss_pred HHHhCC
Confidence 999754
No 224
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=70.69 E-value=3.2 Score=49.39 Aligned_cols=76 Identities=8% Similarity=0.032 Sum_probs=56.5
Q ss_pred CCeEECCCCC--CHHHHHhhcCEEEecC---ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCc
Q 002674 262 PNFIKLPKDA--YTPDFMAASDCMLGKI---GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (894)
Q Consensus 262 ~nv~v~g~~~--~vp~ll~~~d~~I~~~---G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~ 336 (894)
..|.+.++.. .+-..+..+.++|..+ |.++.+||+.+|+|+| .+ +.. ..++....|.++ .+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--ny-g~~------~~V~d~~NG~li--~d~-- 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NK-VET------DYVEHNKNGYII--DDI-- 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ec-CCc------eeeEcCCCcEEe--CCH--
Confidence 5677888776 6677888999999754 7789999999999999 32 112 235556668877 343
Q ss_pred ccHHHHHHHHHhcC
Q 002674 337 GHWKPYLERAISLK 350 (894)
Q Consensus 337 ~~l~~~l~~ll~~~ 350 (894)
..+..+|..+|.++
T Consensus 476 ~~l~~al~~~L~~~ 489 (519)
T TIGR03713 476 SELLKALDYYLDNL 489 (519)
T ss_pred HHHHHHHHHHHhCH
Confidence 47888998888766
No 225
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=70.10 E-value=7.8 Score=38.72 Aligned_cols=40 Identities=25% Similarity=0.296 Sum_probs=27.7
Q ss_pred HHHHHHHhcCCCcEEEECCchhHHH-HH-----HHh-CCcEE-EEecC
Q 002674 108 KDEVEWLNSIKADLVVSDVVPVACR-AA-----ADA-GIRSV-CVTNF 147 (894)
Q Consensus 108 ~~~~~~L~~~~PDlVV~D~~~~a~~-aA-----~~l-gIP~V-~isn~ 147 (894)
....++|++.+||+||+.+++++.. ++ ..+ ++|++ +++++
T Consensus 79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~ 126 (169)
T PF06925_consen 79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDF 126 (169)
T ss_pred HHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCC
Confidence 4567889999999999998664443 32 223 58876 44776
No 226
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=69.92 E-value=11 Score=45.17 Aligned_cols=38 Identities=13% Similarity=0.022 Sum_probs=31.5
Q ss_pred HHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCc
Q 002674 275 DFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNE 312 (894)
Q Consensus 275 ~ll~~~d~~I~~~---G-~~t~~Eal~~G~P~l~ip~~~~~e 312 (894)
++++.||++|..+ | +.++.|||++|+|+|.....++.+
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~ 511 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGC 511 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhh
Confidence 7888999999864 3 358999999999999998776643
No 227
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=67.74 E-value=35 Score=36.48 Aligned_cols=26 Identities=35% Similarity=0.388 Sum_probs=21.1
Q ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 28 GHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 28 GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
=|..=..+|+++|+ .+++|+++.+..
T Consensus 11 i~a~Gi~aL~~al~-~~~dV~VVAP~~ 36 (252)
T COG0496 11 IHAPGIRALARALR-EGADVTVVAPDR 36 (252)
T ss_pred cCCHHHHHHHHHHh-hCCCEEEEccCC
Confidence 35666678999999 899999998764
No 228
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=66.91 E-value=3.4 Score=48.18 Aligned_cols=83 Identities=17% Similarity=0.006 Sum_probs=53.8
Q ss_pred HHHhhcCEEEe-cCC---hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 275 DFMAASDCMLG-KIG---YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 275 ~ll~~~d~~I~-~~G---~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
.+++.++++.. .++ +-++.|||++|+|+|++..++-.|- ++..-.|..+++.+-....|.+++.++..++
T Consensus 361 rl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~Ei------V~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p 434 (495)
T KOG0853|consen 361 RLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEI------VVHGVTGLLIDPGQEAVAELADALLKLRRDP 434 (495)
T ss_pred HHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEE------EEcCCcceeeCCchHHHHHHHHHHHHHhcCH
Confidence 34555666544 333 1589999999999999987655453 4444558888773322336899999998887
Q ss_pred CCcc-CCCCHHHHH
Q 002674 351 PCYE-GGINGGEVA 363 (894)
Q Consensus 351 ~~~~-~~~~g~~~~ 363 (894)
.... ...+|.+++
T Consensus 435 ~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 435 ELWARMGKNGLKRV 448 (495)
T ss_pred HHHHHHHHHHHHHH
Confidence 4321 445555443
No 229
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=66.45 E-value=2.2e+02 Score=31.88 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=70.7
Q ss_pred CCCcEEEEEcCCCCChhh---hHHhh-------CC-----CCcEEEEeCCCCCC------C-C---CCeEEC-CCC--CC
Q 002674 221 DDVKLLILNFGGQPAGWK---LKEEY-------LP-----SGWKCLVCGASDSQ------L-P---PNFIKL-PKD--AY 272 (894)
Q Consensus 221 ~~~p~Vlvs~Gs~~~~~~---l~~~L-------l~-----~~~~~vv~G~~~~~------l-p---~nv~v~-g~~--~~ 272 (894)
+.+|.++||.-|.....+ +++++ .. |...++++|.++.. + . .+|.+. ++. .+
T Consensus 252 ~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aED 331 (444)
T KOG2941|consen 252 PERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAED 331 (444)
T ss_pred cCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccceeeeeccccccc
Confidence 467889998877654211 22222 11 44567788877631 1 1 233322 221 23
Q ss_pred HHHHHhhcCEEEe----cCChh---HHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEccCCCCcccHHHHHH
Q 002674 273 TPDFMAASDCMLG----KIGYG---TVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDLLTGHWKPYLE 344 (894)
Q Consensus 273 vp~ll~~~d~~I~----~~G~~---t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~-G~g~~~~~~~~~~~~l~~~l~ 344 (894)
-|.+|+.||+-|| .+|.- -+.+-.-+|+|++++.+.- .+-|+++ -.|.+.+. ..++.+.|+
T Consensus 332 YP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc-------l~ELVkh~eNGlvF~D----s~eLa~ql~ 400 (444)
T KOG2941|consen 332 YPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC-------LDELVKHGENGLVFED----SEELAEQLQ 400 (444)
T ss_pred chhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh-------HHHHHhcCCCceEecc----HHHHHHHHH
Confidence 3789999999886 35553 4677888999999997542 2225544 46877764 346777787
Q ss_pred HHHhc
Q 002674 345 RAISL 349 (894)
Q Consensus 345 ~ll~~ 349 (894)
-++.+
T Consensus 401 ~lf~~ 405 (444)
T KOG2941|consen 401 MLFKN 405 (444)
T ss_pred HHHhc
Confidence 77754
No 230
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=63.07 E-value=23 Score=37.35 Aligned_cols=85 Identities=20% Similarity=0.296 Sum_probs=48.2
Q ss_pred CCCcEEEEEcCCCCCh--h------hhHHhhCCCCcEEEEeCCCCC--C---------CCC-CeEECCCCC--CHHHHHh
Q 002674 221 DDVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVCGASDS--Q---------LPP-NFIKLPKDA--YTPDFMA 278 (894)
Q Consensus 221 ~~~p~Vlvs~Gs~~~~--~------~l~~~Ll~~~~~~vv~G~~~~--~---------lp~-nv~v~g~~~--~vp~ll~ 278 (894)
.++++|++..|+.... + ++.+.+....+.++++|...+ . ++. .+.+.+-.+ .+..++.
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~ 182 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALIS 182 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHh
Confidence 4677888888876542 1 233455555566777765443 1 122 344555332 2336778
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 279 ~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
.||++|+.-. |.+.=|.+.|+|+|++=
T Consensus 183 ~a~~~I~~Dt-g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 183 RADLVIGNDT-GPMHLAAALGTPTVALF 209 (247)
T ss_dssp TSSEEEEESS-HHHHHHHHTT--EEEEE
T ss_pred cCCEEEecCC-hHHHHHHHHhCCEEEEe
Confidence 8999999655 78888999999999984
No 231
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=62.83 E-value=14 Score=37.70 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=42.8
Q ss_pred cCCCCcccHHHHHHHHHHHHHC--CCeEEEEeCCCCcc--cccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHH
Q 002674 22 VTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFV--FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~--Gh~Vt~~~~~~~~~--~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~ 97 (894)
++....|=+..+..|+++|.++ |+.|.+-+..+... ..+.+. +.+.+.. ...|..
T Consensus 26 iHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~-~~v~~~~------------~P~D~~-------- 84 (186)
T PF04413_consen 26 IHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP-DRVDVQY------------LPLDFP-------- 84 (186)
T ss_dssp EE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G-GG-SEEE---------------SSH--------
T ss_pred EEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC-CCeEEEE------------eCccCH--------
Confidence 4556689999999999999987 78887776654221 111110 0100000 111221
Q ss_pred HhhcchHHhHHHHHHHHhcCCCcEEEE-CCchhH--HHHHHHhCCcEEEE
Q 002674 98 TAVAPRKSILKDEVEWLNSIKADLVVS-DVVPVA--CRAAADAGIRSVCV 144 (894)
Q Consensus 98 ~~~~~~~~ll~~~~~~L~~~~PDlVV~-D~~~~a--~~aA~~lgIP~V~i 144 (894)
....++|+.++||++|. ..+.|. +..|+..|||++.+
T Consensus 85 ----------~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~Lv 124 (186)
T PF04413_consen 85 ----------WAVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVLV 124 (186)
T ss_dssp ----------HHHHHHHHHH--SEEEEES----HHHHHH-----S-EEEE
T ss_pred ----------HHHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEEE
Confidence 11245678889999995 444443 34457789999987
No 232
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=62.62 E-value=1.1 Score=52.13 Aligned_cols=44 Identities=18% Similarity=0.101 Sum_probs=34.2
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
.+..|...+|.+. ++..|. +.|.+++|+|++ |||+|||+.||+.
T Consensus 378 l~~~p~~~~h~~~----~~~~~~-~~gi~~~liRlsvGlEd~~dL~~Dl~~ 423 (431)
T PRK08248 378 LIIHPASTTHQQL----SEEEQL-AAGVTPGLVRLSVGTEAIDDILDDLRQ 423 (431)
T ss_pred eeeCCCcCccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3555656666655 566665 788899999999 8999999999976
No 233
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=62.34 E-value=90 Score=33.64 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=24.8
Q ss_pred ceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 14 ~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
++|+||... --|. |..=..+|+++|.+.| +|+++.+..
T Consensus 4 ~~M~ILltN-DDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~ 41 (257)
T PRK13932 4 KKPHILVCN-DDGI-EGEGIHVLAASMKKIG-RVTVVAPAE 41 (257)
T ss_pred CCCEEEEEC-CCCC-CCHHHHHHHHHHHhCC-CEEEEcCCC
Confidence 457786443 3332 3344568899998887 798887653
No 234
>PLN02509 cystathionine beta-lyase
Probab=60.87 E-value=1.3 Score=51.98 Aligned_cols=45 Identities=22% Similarity=0.201 Sum_probs=35.1
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 403 RDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 403 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+.+..|+..++.+. ++..|. +.|.+++|||++ |||+|||+.||+.
T Consensus 411 SLi~~p~~~sh~~~----~~~~~~-~~Gi~~~liRlSvGlE~~~DLi~Dl~~ 457 (464)
T PLN02509 411 SLISMPCFMSHASI----PAEVRE-ARGLTEDLVRISAGIEDVDDLISDLDI 457 (464)
T ss_pred ceeeCCcccccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33555666666655 566665 778899999999 8999999999976
No 235
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=60.68 E-value=32 Score=37.16 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=28.7
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCC--CeEEEEeCCC
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAP 54 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~G--h~Vt~~~~~~ 54 (894)
||++-. .+.|-+....++.++|+++. .+|++++...
T Consensus 2 ILii~~-~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~ 39 (279)
T cd03789 2 ILVIRL-SWIGDVVLATPLLRALKARYPDARITVLAPPW 39 (279)
T ss_pred EEEEec-ccHHHHHHHHHHHHHHHHHCCCCEEEEEEChh
Confidence 444444 48999999999999999975 7899998754
No 236
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=60.22 E-value=1.4 Score=51.12 Aligned_cols=47 Identities=15% Similarity=0.062 Sum_probs=35.5
Q ss_pred CCcccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 401 PGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 401 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
..+.+..|....|.+. ++..++ +.|.+++|+|++ |||+|||+.||+.
T Consensus 367 ~~sl~~~~~~~~h~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 415 (418)
T TIGR01326 367 AKSLVIHPASTTHQQL----SEEEQL-KAGVTPGLIRLSVGIENIDDIIADLEQ 415 (418)
T ss_pred CCceeeCCCCCCcccC----CHHHHH-hcCCCCCeEEEEecCCCHHHHHHHHHH
Confidence 3444555666666654 555555 788899999999 8999999999864
No 237
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=59.72 E-value=11 Score=42.81 Aligned_cols=97 Identities=18% Similarity=0.278 Sum_probs=50.5
Q ss_pred hHHHHHHhCCCCCCcEEEEEc--C--CCC-----C--hh--hhHHhhCCCCcEEEEeCCC-----CC---CCCCCeEECC
Q 002674 210 RKEVRKELGIEDDVKLLILNF--G--GQP-----A--GW--KLKEEYLPSGWKCLVCGAS-----DS---QLPPNFIKLP 268 (894)
Q Consensus 210 ~~e~r~~lgl~~~~p~Vlvs~--G--s~~-----~--~~--~l~~~Ll~~~~~~vv~G~~-----~~---~lp~nv~v~g 268 (894)
.+.+++.++++.++++|+.+- . ... . .. +-+..+...++.+++..-. .. ....++..+.
T Consensus 179 ~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~ 258 (369)
T PF04464_consen 179 RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVS 258 (369)
T ss_dssp HHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SHHHHTT----TT-TTTEEE-T
T ss_pred HHHHHHHhccCCCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCchhhhchhhhhccCCcEEECC
Confidence 456778888888877666652 1 111 0 00 0111234567766653211 00 1346777665
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002674 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (894)
Q Consensus 269 ~~~~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~ 307 (894)
....+.++|..+|++||--. ..+.|.+.+++|+|+...
T Consensus 259 ~~~~~~~ll~~aDiLITDyS-Si~fD~~~l~KPiify~~ 296 (369)
T PF04464_consen 259 DNEDIYDLLAAADILITDYS-SIIFDFLLLNKPIIFYQP 296 (369)
T ss_dssp T-S-HHHHHHT-SEEEESS--THHHHHGGGT--EEEE-T
T ss_pred CCCCHHHHHHhcCEEEEech-hHHHHHHHhCCCEEEEec
Confidence 44456799999999999654 688899999999998864
No 238
>PRK07049 methionine gamma-lyase; Validated
Probab=59.13 E-value=1.5 Score=50.97 Aligned_cols=47 Identities=21% Similarity=0.063 Sum_probs=34.4
Q ss_pred CCcccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 401 PGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 401 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
..+.+..|...++.+. .+..+. +.|.+++|||+| |||+|||+.||+.
T Consensus 374 ~~sli~~~~~~~h~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 422 (427)
T PRK07049 374 TESLASHPASMTHSGV----PADVRE-RIGVLESTIRLSIGIEHPDDLIADLAQ 422 (427)
T ss_pred CCceeeCCCccccccC----CHHHHH-hcCCCcCeEEEEeCcCCHHHHHHHHHH
Confidence 3444555666666654 455555 678899999999 8999999999875
No 239
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=57.88 E-value=1.4 Score=50.26 Aligned_cols=43 Identities=26% Similarity=0.231 Sum_probs=31.3
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|.-.++.+. +|..++ +.|.+++|||+| +||+|||+.||+.
T Consensus 330 ~~~p~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~ 374 (380)
T PRK06176 330 VGIPAFMTHACI----PKEQRE-AAGIRDGLVRLSVGIEHEQDLLEDLEQ 374 (380)
T ss_pred eeCCcccccccC----CHHHHH-hcCCCcCeEEEEeccCCHHHHHHHHHH
Confidence 444444444444 454555 678899999999 8999999999875
No 240
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=56.76 E-value=2.5 Score=47.94 Aligned_cols=47 Identities=21% Similarity=0.090 Sum_probs=37.6
Q ss_pred CCCcccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
...+.++.|+.+.|++. +..|. +.+-.++|+|.| |||.|||+.|++.
T Consensus 354 ~~eSL~~~p~~mth~~~-----~e~~~-~~Gi~~~LVRvSVGiEd~~dL~~d~~~ 402 (409)
T KOG0053|consen 354 GNESLAEPPAIMTHASE-----LEERE-KFGIDPNLVRVSVGIEDIEDLIKDFQQ 402 (409)
T ss_pred ccchhhcchhhhccCCC-----HHHHH-hcCCCCCcEEEEeccCCHHHHHHHHHH
Confidence 44555888888888863 44455 888899999999 9999999999875
No 241
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=55.78 E-value=35 Score=39.70 Aligned_cols=71 Identities=13% Similarity=0.196 Sum_probs=55.6
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEE-EccCCCCcccHHHHHHHHHhcCC
Q 002674 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAISLKP 351 (894)
Q Consensus 275 ~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~-~~~~~~~~~~l~~~l~~ll~~~~ 351 (894)
.+++.||++|+. =+-++.=|+.+|+|++.+++ + +-....+...|.... .+.++++.+.+.+.+++++++..
T Consensus 323 ~iIs~~dl~ig~-RlHa~I~a~~~gvP~i~i~Y----~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~ 394 (426)
T PRK10017 323 KILGACELTVGT-RLHSAIISMNFGTPAIAINY----E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLP 394 (426)
T ss_pred HHHhhCCEEEEe-cchHHHHHHHcCCCEEEeee----h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHH
Confidence 678899999984 44567778999999999984 2 355667788888754 67778887889999999987763
No 242
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=55.71 E-value=1.7 Score=50.07 Aligned_cols=44 Identities=18% Similarity=0.083 Sum_probs=32.8
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
.+..|....|.+. ++..+. +.+.+++++|++ |||+|||+.||+.
T Consensus 346 l~~~p~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 391 (398)
T PRK07504 346 LITHPATTTHKNL----SPEARA-ELGISEGFLRLSAGLEDTDDLIEDLAA 391 (398)
T ss_pred eeeCCCCCCcccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3555555555544 455555 678899999999 8999999999976
No 243
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=55.21 E-value=1.9 Score=49.65 Aligned_cols=45 Identities=18% Similarity=0.088 Sum_probs=33.4
Q ss_pred ccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
.+..|....+.+. ++..|. +.|.+++++|++ |||+|||+.||+..
T Consensus 344 l~~~~~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~a 390 (398)
T PRK08249 344 IYGPARTTSHVEN----TLEERA-ALGIPEGLVRISVGIEDTEDLIADLEQA 390 (398)
T ss_pred eeeCCcccccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 3555555666554 455555 678899999999 89999999999763
No 244
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=55.18 E-value=38 Score=29.64 Aligned_cols=52 Identities=17% Similarity=0.068 Sum_probs=35.3
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 289 ~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
..-+.|++++|+|+|.-+. ......+...--++.++ +.++|.+++..+++++
T Consensus 12 ~~r~~E~~a~G~~vi~~~~------~~~~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 12 NMRIFEAMACGTPVISDDS------PGLREIFEDGEHIITYN----DPEELAEKIEYLLENP 63 (92)
T ss_pred chHHHHHHHCCCeEEECCh------HHHHHHcCCCCeEEEEC----CHHHHHHHHHHHHCCH
Confidence 3579999999999998652 12333333222455554 3568999999999776
No 245
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=54.53 E-value=4.9 Score=46.87 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=32.9
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
+..|....|.+. .+..+. +.|.+++|||++ +||+|||+.||+..
T Consensus 383 i~~p~~~~h~~~----~~~~~~-~~gi~~~liRlSvGlEd~~dli~dl~~A 428 (436)
T PRK07812 383 VIHPASTTHSQL----TPEEQL-ATGVTPGLVRLAVGIEGIDDILADLEAG 428 (436)
T ss_pred eeCCCCCCcccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 444555555554 455555 678899999999 89999999999763
No 246
>PRK06434 cystathionine gamma-lyase; Validated
Probab=53.99 E-value=1.8 Score=49.62 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=32.0
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|....|.+. .+..+. +.|.+++|+|++ |||+|||+.||+.
T Consensus 336 ~~~p~~~~h~~~----~~e~~~-~~gi~~~liRlsvGlEd~~dLi~dl~~ 380 (384)
T PRK06434 336 ITLPVETSHSSL----SPEERE-RLGISDNLVRFSIGIEDIDDLIKDIEN 380 (384)
T ss_pred eECCCccccccC----CHHHHH-hcCCCcCeEEEEeCcCCHHHHHHHHHH
Confidence 444555555544 455555 778899999999 8999999999875
No 247
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=53.69 E-value=78 Score=33.64 Aligned_cols=28 Identities=25% Similarity=0.410 Sum_probs=23.1
Q ss_pred CcEEEE-CC--chhHHHHHHHhCCcEEEEec
Q 002674 119 ADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (894)
Q Consensus 119 PDlVV~-D~--~~~a~~aA~~lgIP~V~isn 146 (894)
||++++ |. .-.|..=|+.+|||+|.+.+
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvD 187 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVD 187 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEec
Confidence 999984 64 66788889999999999843
No 248
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=52.71 E-value=2.2 Score=48.98 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=32.2
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|...++.+. ++..+. +.|.+++|+|++ +||+|||++||+.
T Consensus 334 ~~~~~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 378 (386)
T PRK08045 334 ISHAATMTHAGM----APEARA-AAGISETLLRISTGIEDGEDLIADLEN 378 (386)
T ss_pred EeCCCCcccccC----CHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 444555555544 454444 678899999999 8999999999976
No 249
>PRK06767 methionine gamma-lyase; Provisional
Probab=51.90 E-value=2.7 Score=48.16 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=31.1
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|....+... ++..+. +.+.++.++|+| |||+|||+.||+.
T Consensus 337 ~~~p~~~~~~~~----~~~~~~-~~gi~~~l~R~svGlE~~~dl~~dl~~ 381 (386)
T PRK06767 337 IQHPATMTHAAI----PAELRQ-EMGIYDNLIRLSVGLESWEDIVSDLEQ 381 (386)
T ss_pred ccCCCccccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444444455443 454554 677899999999 8999999999875
No 250
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=50.96 E-value=2.5 Score=48.55 Aligned_cols=45 Identities=11% Similarity=0.140 Sum_probs=33.3
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 403 RDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 403 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+-+..|..+.|.+. ++..+. +.|.+++|||++ +||+|||++||+.
T Consensus 340 sl~~~p~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 386 (390)
T PRK08133 340 TTITHPATTTHGRL----SPEARA-AAGITEGLIRVAVGLEDVADIKADLAR 386 (390)
T ss_pred eeeecCCCCCcccC----CHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 33555666666654 444444 678899999999 8999999999975
No 251
>PRK07671 cystathionine beta-lyase; Provisional
Probab=50.50 E-value=2.4 Score=48.36 Aligned_cols=45 Identities=29% Similarity=0.194 Sum_probs=32.6
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 403 RDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 403 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+.+..|....+.+. .+..+. +.|.++.+||+| +||+|||+.||+.
T Consensus 328 sl~~~~~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 374 (377)
T PRK07671 328 SLISIPSQMTHASI----PADRRK-ELGITDGLIRISVGIEDGEDLIEDLAQ 374 (377)
T ss_pred eEeECCCccccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33445555555544 444455 678899999999 8999999999864
No 252
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=50.23 E-value=2.5 Score=49.31 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=25.5
Q ss_pred ccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 421 SASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
++..|. +.|.++++||+| +||+|||+.||+.
T Consensus 400 ~~~~~~-~~Gi~~~liRlsvGlE~~~dLi~Dl~~ 432 (437)
T PRK05613 400 DEAGLA-RAGITQATVRLSVGIEDIDDIIADLEG 432 (437)
T ss_pred CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 344444 678899999999 8999999999975
No 253
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=49.87 E-value=1.6e+02 Score=29.74 Aligned_cols=31 Identities=3% Similarity=-0.147 Sum_probs=22.1
Q ss_pred cCCCcEEEECCch-hHHHHHHHh-CCcEEEEec
Q 002674 116 SIKADLVVSDVVP-VACRAAADA-GIRSVCVTN 146 (894)
Q Consensus 116 ~~~PDlVV~D~~~-~a~~aA~~l-gIP~V~isn 146 (894)
.+.||+|+++.-+ .++.+.... ++|.+++.-
T Consensus 64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 5789999999844 344555555 899988743
No 254
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=49.66 E-value=2.5 Score=49.10 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=32.2
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|....|.+. .+..+. +.|.+++++|++ |||+|||+.||+.
T Consensus 374 v~~p~~~~h~~~----~~~~~~-~~gi~~~liR~svGlEd~~dLi~dl~~ 418 (425)
T PRK06084 374 ACHPASTTHRQL----NDEELE-KAGVSRDMVRLSIGIEHIDDIIADLAQ 418 (425)
T ss_pred eeCCCcCCcccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444555555544 445555 788899999999 8999999999875
No 255
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=49.62 E-value=50 Score=36.56 Aligned_cols=64 Identities=20% Similarity=0.196 Sum_probs=40.5
Q ss_pred hhCCCCcEEEEe-CCCCCC--------CCCCeEECCCCC--CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002674 242 EYLPSGWKCLVC-GASDSQ--------LPPNFIKLPKDA--YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (894)
Q Consensus 242 ~Ll~~~~~~vv~-G~~~~~--------lp~nv~v~g~~~--~vp~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip 306 (894)
.+...++.+++. |...+. ...++.+.+..+ .+..+++.||+|||.-. |.+.=|.+.|+|+|++=
T Consensus 205 ~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I~nDS-Gp~HlA~A~g~p~valf 279 (322)
T PRK10964 205 LLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVVSVDT-GLSHLTAALDRPNITLY 279 (322)
T ss_pred HHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEEecCC-cHHHHHHHhCCCEEEEE
Confidence 443456667665 543211 122344444432 23367789999999754 77888899999999984
No 256
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=49.58 E-value=2.5 Score=48.48 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=26.2
Q ss_pred ccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 421 SASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
++..+. +.|.++++||+| +||+|||+.||+..
T Consensus 347 ~~~~~~-~~gi~~~liRlsvGlE~~~dli~Dl~~a 380 (388)
T PRK08861 347 GEEALA-EAGVSQQLLRLSVGLEDAQDLIADLDQA 380 (388)
T ss_pred CHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 444555 677899999999 89999999999763
No 257
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=48.73 E-value=2.4 Score=49.33 Aligned_cols=44 Identities=25% Similarity=0.208 Sum_probs=31.9
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
+..|....|.+. ++..+. +.|.+++|||++ |||+|||+.||+..
T Consensus 379 ~~~p~~~~h~~~----~~~~~~-~~Gi~~~liRlsvGlE~~~dli~dl~~A 424 (433)
T PRK08134 379 VIHPASTTHFRM----DAAALA-AAGIGEGTIRLSIGLEDADDLIDDLKRA 424 (433)
T ss_pred eeCCCccCcccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 344444555544 444444 678899999999 89999999999763
No 258
>PRK06460 hypothetical protein; Provisional
Probab=48.50 E-value=2.5 Score=48.28 Aligned_cols=43 Identities=26% Similarity=0.171 Sum_probs=30.6
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|..+.+... .+..+. +.+.++.++|+| +||+|||+.||+.
T Consensus 326 ~~~p~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 370 (376)
T PRK06460 326 ISHPATMSHRTL----SLEERK-IVGITDSLLRLSVGIEDVNDLIEDLDR 370 (376)
T ss_pred EeCccccccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444545554443 344444 567889999999 8999999999876
No 259
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=47.40 E-value=2.8 Score=48.67 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=22.5
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002674 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
..|.++++||++ |||+|||+.||+.
T Consensus 396 ~~gi~~~liRlsvGlE~~~dli~dl~~ 422 (427)
T PRK05994 396 AAGAGPDVVRLSIGIEDVDDIIADLEQ 422 (427)
T ss_pred hcCCCCCcEEEEeccCCHHHHHHHHHH
Confidence 577889999999 8999999999975
No 260
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=47.13 E-value=65 Score=32.57 Aligned_cols=35 Identities=20% Similarity=0.503 Sum_probs=23.7
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCe--EE-EEeCCC
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHD--VH-VVTGAP 54 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~--Vt-~~~~~~ 54 (894)
|||+|+.+|.| +....+.++|.+++++ +. +++..+
T Consensus 1 mrI~~~~Sg~~----~~~~~~l~~l~~~~~~~~iv~Vit~~~ 38 (181)
T PF00551_consen 1 MRIVFFGSGSG----SFLKALLEALKARGHNVEIVLVITNPD 38 (181)
T ss_dssp EEEEEEESSSS----HHHHHHHHHHHTTSSEEEEEEEEESST
T ss_pred CEEEEEEcCCC----HHHHHHHHHHHhCCCCceEEEEecccc
Confidence 67877866544 5566778899999997 33 444433
No 261
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=46.63 E-value=39 Score=39.45 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=60.1
Q ss_pred CCcEEEEeCCCCC---C---C--CCCeEECC-CCC-CHHHHHhhcCEEEe--c--CChhHHHHHHHcCCcEEEEeCCCCC
Q 002674 246 SGWKCLVCGASDS---Q---L--PPNFIKLP-KDA-YTPDFMAASDCMLG--K--IGYGTVSEALAYKLPFVFVRRDYFN 311 (894)
Q Consensus 246 ~~~~~vv~G~~~~---~---l--p~nv~v~g-~~~-~vp~ll~~~d~~I~--~--~G~~t~~Eal~~G~P~l~ip~~~~~ 311 (894)
|++.+-+ |.... . + -+|++..+ +.. .+.+++..||+++. + +-..++.||+.+|+|++........
T Consensus 305 Pd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~ 383 (438)
T TIGR02919 305 PDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHN 383 (438)
T ss_pred CCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCC
Confidence 7777665 43322 1 1 26766654 344 55688999999884 3 3346899999999999998754222
Q ss_pred chHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 312 eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
. +.... |.+++..+. +.+.++|.++|.++
T Consensus 384 ~-----~~i~~---g~l~~~~~~--~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 384 R-----DFIAS---ENIFEHNEV--DQLISKLKDLLNDP 412 (438)
T ss_pred c-----ccccC---CceecCCCH--HHHHHHHHHHhcCH
Confidence 1 11222 445665553 57888888888766
No 262
>PRK05939 hypothetical protein; Provisional
Probab=45.98 E-value=3.6 Score=47.37 Aligned_cols=43 Identities=26% Similarity=0.085 Sum_probs=31.1
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+.-|....|.+. .+..++ ..+.+++|+|++ |||+|||+.||+.
T Consensus 348 ~~~p~~~~~~~~----~~~~~~-~~gi~~~lvR~svGlEd~~dLi~dl~~ 392 (397)
T PRK05939 348 VIPVAPTIYYEM----GAERRA-SMGIADSLIRVSVGIEDEADLIADFEQ 392 (397)
T ss_pred eecCcccccccC----CHHHHH-hcCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 333444555543 454555 678899999999 8999999999875
No 263
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=45.91 E-value=3.2 Score=47.36 Aligned_cols=43 Identities=26% Similarity=0.221 Sum_probs=30.9
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|...++... ++..++ +.|.+++++|++ +||+|||+.||+.
T Consensus 327 ~~~p~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 371 (378)
T TIGR01329 327 ISMPCFMSHASI----PAEVRE-ERGLPEDLVRLSVGIEDVDDLISDLDI 371 (378)
T ss_pred eeCCCccccccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 333444444433 444455 677889999999 8999999999875
No 264
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=45.32 E-value=1.1e+02 Score=30.37 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=31.9
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|.+...-.|.|=.+-+..||..|++.|+.|.++-..+
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~ 38 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADI 38 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 5567788889999999999999999999999986543
No 265
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=44.99 E-value=4.1 Score=46.81 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=24.8
Q ss_pred ccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 421 SASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
.+..+. ..|.+.+|+|+| +||+|||+.||+.
T Consensus 354 ~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 386 (391)
T TIGR01328 354 PKEERE-AAGITDGMIRLSVGLEDADDLIADLKQ 386 (391)
T ss_pred CHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 344444 567789999999 8999999999875
No 266
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism]
Probab=44.66 E-value=25 Score=37.26 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=62.0
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCChhhhH-HhhcCCCCeEEEEEecCCceeE
Q 002674 639 AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQM-ASACGEANKLLAMVCQPAELLG 717 (894)
Q Consensus 639 ~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~~G~~~G~mDq~-as~~G~~~~~~~~~~~~~~~~~ 717 (894)
.+|-++||++|++++-.-..+.++.+|-.+.- +..-..+.|....|.+ .|+. ...+||. .+.-..-|....+
T Consensus 130 Glsk~~mldy~lmierhpdn~~a~mmGgf~GS--flr~l~e~E~~~~~~~---ad~ilp~~~gg~--~li~~lpP~dlg~ 202 (355)
T KOG1537|consen 130 GLSKGSMLDYSLMIERHPDNAVAEMMGGFLGS--FLRALLESEAKVSGYH---ADNILPAIMGGF--VLIRNLPPLDLGK 202 (355)
T ss_pred CCccccchhHHHHHhhChHHHHHHHHhhHHHH--HHHHhCHhhhhhcCCC---HHHhcccccCCe--eeecCCCcccccc
Confidence 67899999999999999999999998865433 3333334455555554 3554 6778884 2222223333324
Q ss_pred EeecC--CCeEEEEEe------CCCCcccCCCCch
Q 002674 718 VVEIP--SHIRFWGID------SGIRHSVGGADYG 744 (894)
Q Consensus 718 ~v~~p--~~~~~vv~~------sgv~~~~~~~~y~ 744 (894)
++.+| +++.|+++- |...|...+.+|.
T Consensus 203 ~~r~pw~~~lk~i~viP~Fel~T~k~R~vLPt~yp 237 (355)
T KOG1537|consen 203 PLRFPWDKDLKFILVIPDFELPTKKMRAVLPTEYP 237 (355)
T ss_pred cccCCCCccceEEEEeccccccchhhhhhcCcccc
Confidence 55555 677777753 4444666666654
No 267
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=44.42 E-value=1.1e+02 Score=34.13 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=23.7
Q ss_pred CCcEEEE-CC--chhHHHHHHHhCCcEEEEec
Q 002674 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (894)
Q Consensus 118 ~PDlVV~-D~--~~~a~~aA~~lgIP~V~isn 146 (894)
.||+||. |. ...+..=|..+|||+|.+.|
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivD 183 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVD 183 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEee
Confidence 6999995 54 67788889999999999843
No 268
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=43.20 E-value=3.7 Score=47.00 Aligned_cols=43 Identities=21% Similarity=0.192 Sum_probs=30.3
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|....+.+. ++..++ +.|.++.+||++ +||+|||+.||+.
T Consensus 333 ~~~p~~~~~~~~----~~~~~~-~~gi~~~liRlsvGlE~~~dl~~dl~~ 377 (382)
T TIGR02080 333 IAHPATMTHAAM----GPEARA-EAGISDTLLRLSVGLEDADDLIADLEQ 377 (382)
T ss_pred eECCCccCcccC----CHHHHH-hcCCCcCeEEEEeccCCHHHHHHHHHH
Confidence 333444444443 344444 677889999999 8999999999875
No 269
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=42.98 E-value=3.2 Score=47.87 Aligned_cols=44 Identities=23% Similarity=0.153 Sum_probs=30.9
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
+.-|....|.+. .+..|. +.|.+++|||++ |||.|||+.||+..
T Consensus 342 ~~~p~~~~h~~~----~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~a 387 (405)
T PRK08776 342 IAHPASMTHAAM----TAEARA-AAGISDGLLRLSVGIESAEDLLIDLRAG 387 (405)
T ss_pred EECCcccccccC----CHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 333444444443 344444 567889999999 89999999999774
No 270
>PRK06234 methionine gamma-lyase; Provisional
Probab=42.19 E-value=4.3 Score=46.72 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=31.3
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
+..|....+.+. .+..+. +.|.+++|+|+| +||+|||+.||+..
T Consensus 349 ~~~p~~~~~~~~----~~~~~~-~~gi~~~l~R~svGlE~~~dl~~dl~~a 394 (400)
T PRK06234 349 IQHPASMTHSPY----TAEERK-EAGISDGLVRLSVGLEDVDDIIADLKQA 394 (400)
T ss_pred ecCCccCCCCCC----CHHHHH-hcCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 444555555444 344444 677899999999 89999999998763
No 271
>PRK07503 methionine gamma-lyase; Provisional
Probab=42.15 E-value=4.8 Score=46.43 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=26.0
Q ss_pred ccCCCCCCCCCCCCccccc--cccceeccCCCCCC
Q 002674 421 SASRSPPCTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
++..+. +.|.+++|||++ +||+|||+.||+..
T Consensus 360 ~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~A 393 (403)
T PRK07503 360 TPEERA-EHGISEGLVRLSVGLEDVADILADLAQA 393 (403)
T ss_pred CHHHHH-hcCCCCCeEEEEEecCCHHHHHHHHHHH
Confidence 444554 677889999999 89999999998763
No 272
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=41.54 E-value=2.1 Score=49.05 Aligned_cols=43 Identities=23% Similarity=0.173 Sum_probs=28.1
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|....+.+. ++..+. +.+.+++++|+| +||+|||++||+.
T Consensus 339 i~~p~~~~h~~~----~~e~~~-~~Gi~~~liRlSvGlEd~~dLi~Dl~~ 383 (386)
T PF01053_consen 339 ISHPASTSHRSL----SPEERA-EAGISDGLIRLSVGLEDPDDLIADLEQ 383 (386)
T ss_dssp EEETTCTTTTTS----CHHHHH-HTTS-TTEEEEE--SS-HHHHHHHHHH
T ss_pred cccccchhhccC----Chhhhh-ccCCCCCeeEEEeccCCHHHHHHHHHH
Confidence 444444444433 343444 678899999999 8999999999853
No 273
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=41.39 E-value=4.9 Score=45.87 Aligned_cols=45 Identities=27% Similarity=0.171 Sum_probs=34.9
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 403 RDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 403 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+.++.|.-+.|..+ .+..|+ +.|..+.|+|++ |||.|||+.||+.
T Consensus 344 SLi~~pa~~th~~~----~~~~r~-~~Gi~~~LvRlSVGlEd~eDLi~Dl~~ 390 (396)
T COG0626 344 SLISHPATMTHASI----PLEERA-KAGITDGLVRLSVGLEDVEDLIADLEQ 390 (396)
T ss_pred cccccccccCcccC----CHhHHH-hcCCCCCeEEEEecCCCHHHHHHHHHH
Confidence 33555555566655 566666 899999999999 8999999999875
No 274
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=40.96 E-value=4.4 Score=47.12 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.2
Q ss_pred cCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 422 ASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..+. +.+.+.+++|++ |||+|||+.||+.
T Consensus 389 ~~~~~-~~Gi~~~liRlSvGlEd~eDLi~Dl~~ 420 (432)
T PRK06702 389 AEDQR-LAGVTSDLIRLSVGIEDVSDIIADLEA 420 (432)
T ss_pred HHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33333 567788999999 8999999999975
No 275
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=40.29 E-value=1.6e+02 Score=30.24 Aligned_cols=110 Identities=16% Similarity=0.144 Sum_probs=55.0
Q ss_pred cccHHHHHHHHHHHHHCCCeEEEEeCCCCcc--cccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHHhhcchH
Q 002674 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFV--FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRK 104 (894)
Q Consensus 27 ~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~--~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~~~~~~~ 104 (894)
.-++.++..+...+..+|-.|.|++..+... .......-+..+-...|-.|..... ......+..+.... .
T Consensus 39 ~~~L~~A~~~i~~i~~~~g~iLfV~t~~~~~~~v~~~a~~~~~~~i~~rw~~G~LTN~---~~~~~~~~~~~~~~----~ 111 (193)
T cd01425 39 LEKLRLALNFIANIAAKGGKILFVGTKPQAQRAVKKFAERTGSFYVNGRWLGGTLTNW---KTIRKSIKRLKKLE----K 111 (193)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCeeecCeecCCcCCCH---HHHHHHHHHHHHHH----H
Confidence 3456777888888888899999998765211 1100000011111112333332110 00111111121110 0
Q ss_pred HhHHHHHHHH-----hcCCCcEEEE-CC--chhHHHHHHHhCCcEEEEec
Q 002674 105 SILKDEVEWL-----NSIKADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (894)
Q Consensus 105 ~ll~~~~~~L-----~~~~PDlVV~-D~--~~~a~~aA~~lgIP~V~isn 146 (894)
....+.+ ....||+||. |. ...+..=|..+|||+|++.|
T Consensus 112 ---~~~~k~~~g~~~~~~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~D 158 (193)
T cd01425 112 ---EKLEKNLGGIKDMFRLPDLVIVLDPRKEHQAIREASKLGIPVIAIVD 158 (193)
T ss_pred ---HHHHHhcccccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 1112222 2347999995 43 56677778999999999854
No 276
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=39.99 E-value=57 Score=37.54 Aligned_cols=38 Identities=26% Similarity=0.318 Sum_probs=31.2
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~ 55 (894)
|++.-+..|.|-.+-.+.|.++|+++|+.|.-+-..|.
T Consensus 3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPD 40 (451)
T COG1797 3 VVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPD 40 (451)
T ss_pred eEEecCCCCCcHHHHHHHHHHHHHhcCCcccccccCCC
Confidence 33467888999999999999999999999986655543
No 277
>KOG2825 consensus Putative arsenite-translocating ATPase [Inorganic ion transport and metabolism]
Probab=39.74 E-value=80 Score=33.73 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=33.4
Q ss_pred eEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 002674 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF 56 (894)
Q Consensus 15 ~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~ 56 (894)
.+|..|.---.|.|-.+-+..||-.|.+.++.|.+++..|..
T Consensus 18 slKwifVGGKGGVGKTTcs~sLAvqla~~r~~vLiISTDPAH 59 (323)
T KOG2825|consen 18 SLKWIFVGGKGGVGKTTCSCSLAVQLAKVRESVLIISTDPAH 59 (323)
T ss_pred eeeEEEEcCcCCcCccchhhHHHHHHhccCCceEEeecCccc
Confidence 355544444456999999999999999999999999988743
No 278
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=37.89 E-value=4.5 Score=46.20 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=24.7
Q ss_pred ccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 421 SASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
++..+. +.|.+++|+|++ |||+|||+.||+.
T Consensus 346 ~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 378 (380)
T TIGR01325 346 QPEERA-AAGIGDGLVRLSVGLEDVDDLIADLKR 378 (380)
T ss_pred CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHh
Confidence 344444 567789999999 8999999999864
No 279
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=37.86 E-value=4.7 Score=46.17 Aligned_cols=43 Identities=21% Similarity=0.133 Sum_probs=30.6
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|....+.+. .+..+. +.|.+++++|++ +||+|||+.||+.
T Consensus 336 ~~~~~~~~~~~~----~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~ 380 (385)
T PRK08574 336 ATYPVKSAASPI----PEEDRK-ALGITEDLVRLSVGLEDVEDLIEDLDQ 380 (385)
T ss_pred eeCCCcCCcccC----CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 433444444443 444444 678899999999 8999999999875
No 280
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=37.74 E-value=67 Score=30.78 Aligned_cols=50 Identities=18% Similarity=0.214 Sum_probs=30.3
Q ss_pred HHhhcCEEEec-CChhHHHHHH---H------cCC-cEEEEeCCCCCchHHH-HHHHHHcCc
Q 002674 276 FMAASDCMLGK-IGYGTVSEAL---A------YKL-PFVFVRRDYFNEEPFL-RNMLEFYQG 325 (894)
Q Consensus 276 ll~~~d~~I~~-~G~~t~~Eal---~------~G~-P~l~ip~~~~~eq~~n-a~~l~~~G~ 325 (894)
++..+|+||.- ||.||..|.. . +.+ |++++...++.+.... .+.+.+.|.
T Consensus 50 m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~~l~~~l~~~~~~g~ 111 (133)
T PF03641_consen 50 MIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWDPLLEFLDRMIEEGF 111 (133)
T ss_dssp HHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCHHHHHHHHHHHHTTS
T ss_pred HHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHHHHHHHHHHHHHCCC
Confidence 45679998865 6678866554 3 345 9999987655554222 234455553
No 281
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=37.62 E-value=2e+02 Score=33.64 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=32.2
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|+++.| .-+..|.|=.+-+..|+++|+++|++|..+-..+
T Consensus 3 m~~i~I--~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~Gp 42 (451)
T PRK01077 3 MPALVI--AAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGP 42 (451)
T ss_pred CcEEEE--EeCCCCCcHHHHHHHHHHHHHhCCCCcceeecCC
Confidence 554444 5677788999999999999999999999886654
No 282
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=36.57 E-value=66 Score=32.63 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=32.2
Q ss_pred HHhhcCEEEec-CChhHHHHHHH---------cCCcEEEEeCCCCCchHH-HHHHHHHcCc
Q 002674 276 FMAASDCMLGK-IGYGTVSEALA---------YKLPFVFVRRDYFNEEPF-LRNMLEFYQG 325 (894)
Q Consensus 276 ll~~~d~~I~~-~G~~t~~Eal~---------~G~P~l~ip~~~~~eq~~-na~~l~~~G~ 325 (894)
++..+|+||.- ||.||+-|.+. +++|++++...++.+... -.+.+.+.|.
T Consensus 93 m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 93 MAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred HHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 44569999875 56788766533 499999998655555422 1245555554
No 283
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=35.52 E-value=3e+02 Score=29.60 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=23.0
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
+||.. .--|. |..-..+|+++|.+. |+|+++.+..
T Consensus 2 ~ILlT-NDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~ 36 (250)
T PRK00346 2 RILLT-NDDGI-HAPGIRALAEALREL-ADVTVVAPDR 36 (250)
T ss_pred eEEEE-CCCCC-CChhHHHHHHHHHhC-CCEEEEeCCC
Confidence 45433 33342 444567889999987 7999987654
No 284
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=35.48 E-value=61 Score=38.36 Aligned_cols=66 Identities=17% Similarity=0.068 Sum_probs=49.5
Q ss_pred HHHHhhcCEEEecC---ChhHH-HHHHHcCC----cEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHH
Q 002674 274 PDFMAASDCMLGKI---GYGTV-SEALAYKL----PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (894)
Q Consensus 274 p~ll~~~d~~I~~~---G~~t~-~Eal~~G~----P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ 345 (894)
..+++.||+++..+ |+|.+ .|.++++. |+|+-...+..+ ....++.+++.|. +.+.++|.+
T Consensus 376 ~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~---------~l~~AllVNP~d~--~~~A~ai~~ 444 (487)
T TIGR02398 376 SAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAV---------ELKGALLTNPYDP--VRMDETIYV 444 (487)
T ss_pred HHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchh---------hcCCCEEECCCCH--HHHHHHHHH
Confidence 36788999998764 88855 59999988 777665544332 2345889998886 588999999
Q ss_pred HHhcC
Q 002674 346 AISLK 350 (894)
Q Consensus 346 ll~~~ 350 (894)
+|+.+
T Consensus 445 AL~m~ 449 (487)
T TIGR02398 445 ALAMP 449 (487)
T ss_pred HHcCC
Confidence 99776
No 285
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=34.96 E-value=3.9e+02 Score=28.59 Aligned_cols=25 Identities=28% Similarity=0.399 Sum_probs=18.8
Q ss_pred cHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 29 HATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 29 Hv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|..-..+|+++|++.| +|+++.+..
T Consensus 12 ~a~Gi~aL~~~l~~~g-~V~VvAP~~ 36 (244)
T TIGR00087 12 HSPGIRALYQALKELG-EVTVVAPAR 36 (244)
T ss_pred CCHhHHHHHHHHHhCC-CEEEEeCCC
Confidence 3344568899999988 899887653
No 286
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=34.72 E-value=27 Score=43.66 Aligned_cols=68 Identities=16% Similarity=0.125 Sum_probs=46.1
Q ss_pred CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCc---EEEEe-CCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHH
Q 002674 272 YTPDFMAASDCMLGKI---GY-GTVSEALAYKLP---FVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (894)
Q Consensus 272 ~vp~ll~~~d~~I~~~---G~-~t~~Eal~~G~P---~l~ip-~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l 343 (894)
.++.+|+.||+|+..+ |+ .++.|+|++|+| ++++. ..+..++ + ..|+.+++.|. +.+.++|
T Consensus 354 ~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~------l---~~~llv~P~d~--~~la~ai 422 (726)
T PRK14501 354 ELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE------L---AEALLVNPNDI--EGIAAAI 422 (726)
T ss_pred HHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH------h---CcCeEECCCCH--HHHHHHH
Confidence 4568999999999764 54 468899999775 23232 2222222 2 23788888774 5899999
Q ss_pred HHHHhcC
Q 002674 344 ERAISLK 350 (894)
Q Consensus 344 ~~ll~~~ 350 (894)
.+++.++
T Consensus 423 ~~~l~~~ 429 (726)
T PRK14501 423 KRALEMP 429 (726)
T ss_pred HHHHcCC
Confidence 9998765
No 287
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=33.36 E-value=51 Score=31.27 Aligned_cols=36 Identities=31% Similarity=0.295 Sum_probs=26.8
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCC
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~ 53 (894)
++|++.++| .++...+..+.+.|+++|++|.++-..
T Consensus 1 k~i~l~vtG--s~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG--SIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S--SGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC--HHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 356666654 466666999999999999999987543
No 288
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.89 E-value=36 Score=38.39 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=30.8
Q ss_pred EecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 20 ~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
.++---|.|-.+-|-.+|..++++|+.|.++|...
T Consensus 105 mfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDT 139 (483)
T KOG0780|consen 105 MFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADT 139 (483)
T ss_pred EEEeccCCCcceeHHHHHHHHHhcCCceeEEeecc
Confidence 45566789999999999999999999999999753
No 289
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=31.81 E-value=6.9 Score=45.12 Aligned_cols=25 Identities=36% Similarity=0.383 Sum_probs=22.3
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002674 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+.+.+++++|+| +||+|||+.||+.
T Consensus 374 ~~gi~~~lvR~svGlE~~~dli~dl~~ 400 (403)
T PRK07810 374 AIGLGDGVVRLSVGLEDTDDLIADLDR 400 (403)
T ss_pred hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 667789999999 8999999999864
No 290
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=30.99 E-value=4.5e+02 Score=28.26 Aligned_cols=25 Identities=20% Similarity=0.301 Sum_probs=18.3
Q ss_pred cHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 29 HATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 29 Hv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|..-..+|+++|++ +|+|+++.+..
T Consensus 12 ~a~Gi~aL~~~l~~-~~~V~VvAP~~ 36 (253)
T PRK13935 12 TSPGIIILAEYLSE-KHEVFVVAPDK 36 (253)
T ss_pred CCHHHHHHHHHHHh-CCcEEEEccCC
Confidence 44446688899975 68999987654
No 291
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=30.94 E-value=3.5e+02 Score=27.56 Aligned_cols=80 Identities=11% Similarity=0.134 Sum_probs=47.8
Q ss_pred EecCCCC-cccHHHHHHHHHHHHHCCCeEEEEeCCCCcccccccCCCceeEeeeccCCCcccccccccCHHHHHHHHHHH
Q 002674 20 YYVTGHG-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSET 98 (894)
Q Consensus 20 ~~v~~~G-~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~~i~~p~~~~~~~~~d~g~~~~~~~~~d~~~~l~~~~~~ 98 (894)
+|++|+. .+.-.-+..+.+.+.+.+.++.+.++..+. ....
T Consensus 3 lYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~------------------------------~p~~-------- 44 (187)
T PF05728_consen 3 LYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP------------------------------FPEE-------- 44 (187)
T ss_pred EEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc------------------------------CHHH--------
Confidence 3667777 344556677888888877777666532200 0000
Q ss_pred hhcchHHhHHHHHHHHhcCCCc--EEEECC--chhHHHHHHHhCCcEEEE
Q 002674 99 AVAPRKSILKDEVEWLNSIKAD--LVVSDV--VPVACRAAADAGIRSVCV 144 (894)
Q Consensus 99 ~~~~~~~ll~~~~~~L~~~~PD--lVV~D~--~~~a~~aA~~lgIP~V~i 144 (894)
.+....+++++..++ ++|+.+ -+.+..+|.+.++|+|.+
T Consensus 45 -------a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLi 87 (187)
T PF05728_consen 45 -------AIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLI 87 (187)
T ss_pred -------HHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEE
Confidence 112224456666654 555554 566677888899999887
No 292
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=29.88 E-value=77 Score=31.45 Aligned_cols=38 Identities=26% Similarity=0.265 Sum_probs=27.8
Q ss_pred HHH-hhcCEEEecC-ChhH---HHHHHHcCCcEEEEeCCCCCc
Q 002674 275 DFM-AASDCMLGKI-GYGT---VSEALAYKLPFVFVRRDYFNE 312 (894)
Q Consensus 275 ~ll-~~~d~~I~~~-G~~t---~~Eal~~G~P~l~ip~~~~~e 312 (894)
.+| ..+|+||.-+ |.|| +.|++.+++|+++++..++.+
T Consensus 86 ~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g~~~ 128 (159)
T TIGR00725 86 FILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTGGWT 128 (159)
T ss_pred HHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCCcch
Confidence 344 4699988764 4555 568899999999999765544
No 293
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=29.73 E-value=3.5e+02 Score=27.79 Aligned_cols=30 Identities=30% Similarity=0.434 Sum_probs=26.5
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEe
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~ 51 (894)
.+|.|.|=.+.++.+|-....+|+.|.++.
T Consensus 28 ~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQ 57 (191)
T PRK05986 28 HTGNGKGKSTAAFGMALRAVGHGKKVGVVQ 57 (191)
T ss_pred ECCCCCChHHHHHHHHHHHHHCCCeEEEEE
Confidence 468899999999999999999999999874
No 294
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=28.92 E-value=82 Score=32.49 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=28.2
Q ss_pred eEEEEEecCCCCcccHHH-HHHHHHHHHHCCCeEEEEeCC
Q 002674 15 HLVFAYYVTGHGFGHATR-VVEVVRNLISAGHDVHVVTGA 53 (894)
Q Consensus 15 ~~~Il~~v~~~G~GHv~r-~laLA~~L~~~Gh~Vt~~~~~ 53 (894)
..+|++.++ |...... +..+++.|.++||+|+++.+.
T Consensus 5 ~k~IllgVT--Gsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 5 GKRIGFGLT--GSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCEEEEEEc--CHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 345656665 4566777 699999999999999987654
No 295
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=28.79 E-value=68 Score=33.74 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=25.6
Q ss_pred HHHHhcCCCcEEEECC---chhHHHHHH----HhCCcEEEEecC
Q 002674 111 VEWLNSIKADLVVSDV---VPVACRAAA----DAGIRSVCVTNF 147 (894)
Q Consensus 111 ~~~L~~~~PDlVV~D~---~~~a~~aA~----~lgIP~V~isn~ 147 (894)
...+++|+||++|.-. ...|...|+ ..|+|+|.|++-
T Consensus 53 ~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~ 96 (277)
T PRK00994 53 KKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIPCIVIGDA 96 (277)
T ss_pred HHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCCEEEEcCC
Confidence 4457899999999654 333444454 348999999764
No 296
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=28.66 E-value=8.3 Score=43.83 Aligned_cols=30 Identities=27% Similarity=0.164 Sum_probs=24.5
Q ss_pred cCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 422 ASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+..|. ..+.+++|+|++ |||+|||+.||+.
T Consensus 329 ~~~r~-~~Gi~~~liRlsvGlE~~~dli~dl~~ 360 (364)
T PRK07269 329 AEVRH-SYGLTDDLLRLSIGIEDARDLIADLKQ 360 (364)
T ss_pred HHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 44444 677789999999 8999999999875
No 297
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.37 E-value=1.3e+02 Score=32.69 Aligned_cols=53 Identities=21% Similarity=0.105 Sum_probs=38.2
Q ss_pred hcCEEEecCChhHHHHHHH------cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 279 ASDCMLGKIGYGTVSEALA------YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 279 ~~d~~I~~~G~~t~~Eal~------~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
.+|++|+-||-||+..++. .++|++.+... ..|.+. ++.++++.+.|+++++.
T Consensus 35 ~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G---------------~lGFL~---~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 35 NPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG---------------HLGFYT---DWRPFEVDKLVIALAKD 93 (265)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC---------------Cceecc---cCCHHHHHHHHHHHHcC
Confidence 4799999999999999876 48999999842 123333 23345677788888744
No 298
>PLN02242 methionine gamma-lyase
Probab=27.82 E-value=8.4 Score=44.67 Aligned_cols=44 Identities=11% Similarity=0.052 Sum_probs=31.0
Q ss_pred cCccccccccccccccccCCCCCCCCCCCCccccc--ccc-ceeccCCCCCC
Q 002674 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLS--TED-FEILHGDCQGL 453 (894)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 453 (894)
+..|....+.+. ++..++ +.|.+++|+|++ ||| .|||+.||+..
T Consensus 366 ~~~p~~~~~~~~----~~~~~~-~~gi~~~liRlsvGlE~~~~dli~dl~~a 412 (418)
T PLN02242 366 MSCSGSSTSSEL----DPEEKA-AAGISPGLVRMSVGYTGTLEQRWSQFEKA 412 (418)
T ss_pred eeCCCccccccC----CHHHHH-hcCCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 444444444443 454554 677889999999 895 99999999864
No 299
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=27.67 E-value=8.5 Score=43.69 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=24.8
Q ss_pred ccCCCCCCCCCCCCccccc--cccceeccCCCCC
Q 002674 421 SASRSPPCTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
++..|. ..|.++.++|++ +||++||+.||+.
T Consensus 328 ~~~~r~-~~gi~~~~~R~svGlE~~~dl~~dl~~ 360 (366)
T PRK08247 328 PEEIRI-ANGVCNRLLRFSVGIENVEDLIADLKQ 360 (366)
T ss_pred CHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 344444 567789999999 8999999999875
No 300
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=27.57 E-value=1.7e+02 Score=33.32 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=48.8
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCc-EEEEccCCCCcccHHHHHHHHHhcC
Q 002674 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQG-GVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 275 ~ll~~~d~~I~~~G~~t~~Eal~~G~P~l~ip~~~~~eq~~na~~l~~~G~-g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
..+++||++|+ .=+-++.=|++.|+|++.+.+. +-+...+++.|. +..+...++..+.+...+.+.+.+.
T Consensus 281 ~~l~~~dl~Vg-~R~HsaI~al~~g~p~i~i~Y~-----~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~ 351 (385)
T COG2327 281 GILAACDLIVG-MRLHSAIMALAFGVPAIAIAYD-----PKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKL 351 (385)
T ss_pred HHhccCceEEe-ehhHHHHHHHhcCCCeEEEeec-----HHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhcc
Confidence 46789999998 4556777799999999999742 344566677776 3455566676666666666665443
No 301
>PRK08114 cystathionine beta-lyase; Provisional
Probab=26.96 E-value=12 Score=43.03 Aligned_cols=25 Identities=20% Similarity=0.175 Sum_probs=21.7
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002674 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+++.+.++||+| |||+|||+.||+.
T Consensus 363 ~~~~~~~liRlSvGlEd~~DLi~Dl~~ 389 (395)
T PRK08114 363 EVDFTGTLIRLHIGLEDVDDLIADLAA 389 (395)
T ss_pred HhcCCCCeEEEEeccCCHHHHHHHHHH
Confidence 456677999999 8999999999975
No 302
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=26.88 E-value=1.6e+02 Score=35.21 Aligned_cols=111 Identities=14% Similarity=0.007 Sum_probs=61.7
Q ss_pred CCCCeEECCCCC--CHHHHHhhcCEEEecCCh---hHHHHHHHcCCcEEEEeCC-C--------CCchHHHH------HH
Q 002674 260 LPPNFIKLPKDA--YTPDFMAASDCMLGKIGY---GTVSEALAYKLPFVFVRRD-Y--------FNEEPFLR------NM 319 (894)
Q Consensus 260 lp~nv~v~g~~~--~vp~ll~~~d~~I~~~G~---~t~~Eal~~G~P~l~ip~~-~--------~~eq~~na------~~ 319 (894)
+|.-|...|... .+-.+|..+++||+-|.- -+-.||+++|+|+|---.. . |.+-+.+. -+
T Consensus 320 ~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY 399 (559)
T PF15024_consen 320 VPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPY 399 (559)
T ss_pred cchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChH
Confidence 666555555432 334788999999997632 5899999999998853221 0 11111111 12
Q ss_pred HH-HcCc--EEEEccCCCCcccHHHHHHHHHhcCC-CccCCCCHHHHHHHHHHHHHc
Q 002674 320 LE-FYQG--GVEMIRRDLLTGHWKPYLERAISLKP-CYEGGINGGEVAAHILQETAI 372 (894)
Q Consensus 320 l~-~~G~--g~~~~~~~~~~~~l~~~l~~ll~~~~-~~~~~~~g~~~~A~~i~~~l~ 372 (894)
++ ..|- -..++.++ ..++.++|++++.++. .|.......+-..+.+..+++
T Consensus 400 ~e~~iG~PhVytVd~~n--~~~v~~Avk~il~~~v~Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 400 AEEFIGEPHVYTVDINN--STEVEAAVKAILATPVEPYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred HHhhCCCCeEEEEcCCC--HHHHHHHHHHHHhcCCCCcCCcccCHHHHHHHHHHHHH
Confidence 33 2443 33444444 4588899999998763 233233333333344444443
No 303
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=26.42 E-value=3.3e+02 Score=29.37 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=23.6
Q ss_pred CCcEEEE-CC--chhHHHHHHHhCCcEEEEec
Q 002674 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (894)
Q Consensus 118 ~PDlVV~-D~--~~~a~~aA~~lgIP~V~isn 146 (894)
.||+||. |. ...+..=|..+|||+|.+.|
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivD 188 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVD 188 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEee
Confidence 6999995 53 66778888999999999844
No 304
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=26.30 E-value=94 Score=29.69 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=31.7
Q ss_pred EEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 19 AYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 19 l~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
.+++++.|.|=.+-++.+++.|+++|.+|.++-+..
T Consensus 2 ~~~~~~~~~Gkt~~~~~l~~~l~~~~~~v~~~kp~~ 37 (134)
T cd03109 2 MGFGTGTDIGKTVATAILARALKEKGYRVAPLKPVQ 37 (134)
T ss_pred EEEeCCCCcCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 467889999999999999999999999999986554
No 305
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.16 E-value=1.5e+02 Score=32.79 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=39.1
Q ss_pred hhcCEEEecCChhHHHHHHH----cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 278 AASDCMLGKIGYGTVSEALA----YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~----~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
..+|++|+-||-||+..++. .++|++.+... ..|.+.+ +..+++.++|+++++.
T Consensus 67 ~~~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G---------------~lGFL~~---~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 67 QYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG---------------HLGFLTQ---IPREYMTDKLLPVLEG 124 (296)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcccCCCEEEEecC---------------CCeEeec---cCHHHHHHHHHHHHcC
Confidence 46999999999999998874 47899999842 1344332 3446777888888744
No 306
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=25.75 E-value=4e+02 Score=30.99 Aligned_cols=35 Identities=20% Similarity=0.125 Sum_probs=27.3
Q ss_pred HHHHHHhcCCCcEEEECCchhHHHHHHHhCCcEEEEe
Q 002674 109 DEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVT 145 (894)
Q Consensus 109 ~~~~~L~~~~PDlVV~D~~~~a~~aA~~lgIP~V~is 145 (894)
+..+.+++.+||++|+... .-.+|+++|+|++.++
T Consensus 368 e~~~~i~~~~pDliiG~s~--~~~~a~~~gip~v~~~ 402 (435)
T cd01974 368 HLRSLLFTEPVDLLIGNTY--GKYIARDTDIPLVRFG 402 (435)
T ss_pred HHHHHHhhcCCCEEEECcc--HHHHHHHhCCCEEEee
Confidence 3456678889999999873 3567888999998775
No 307
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=25.53 E-value=93 Score=33.40 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=31.6
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 16 ~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|+|.++ .-.|.|-.+-+..||.+|+++|+.|.++=..+
T Consensus 1 ~~i~v~-gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dp 38 (267)
T cd02032 1 MVLAVY-GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDP 38 (267)
T ss_pred CEEEEe-cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 456556 47789999999999999999999999885544
No 308
>PRK10037 cell division protein; Provisional
Probab=24.92 E-value=1.1e+02 Score=32.42 Aligned_cols=38 Identities=18% Similarity=0.330 Sum_probs=33.2
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
.|.++..-.|.|=.+-+..||.+|+++|++|.++=..+
T Consensus 3 ~iav~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~D~ 40 (250)
T PRK10037 3 ILGLQGVRGGVGTTSITAALAWSLQMLGENVLVIDACP 40 (250)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence 56778888899999999999999999999999985443
No 309
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.76 E-value=1.2e+02 Score=33.49 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=39.0
Q ss_pred hhcCEEEecCChhHHHHHHHc----CCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 278 AASDCMLGKIGYGTVSEALAY----KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~~----G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
..+|++|+-||-||+..++.. ++|++.|... ..|.+. ++..+++.++|+++++..
T Consensus 67 ~~~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G---------------~lGFLt---~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 67 SSMKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG---------------HLGFLT---EAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred cCcCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC---------------CCcccc---cCCHHHHHHHHHHHHcCC
Confidence 469999999999999988764 8899999742 123222 233457778888887543
No 310
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=24.62 E-value=15 Score=42.07 Aligned_cols=25 Identities=32% Similarity=0.255 Sum_probs=22.1
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002674 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
+.+.+++|||++ +||+|||+.||+.
T Consensus 358 ~~gi~~~liR~svGlE~~~dl~~dl~~ 384 (388)
T PRK07811 358 QLEVPDDLVRLSVGIEDVADLLADLEQ 384 (388)
T ss_pred hcCCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 457889999999 8999999999865
No 311
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.43 E-value=1.5e+02 Score=32.74 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=38.6
Q ss_pred hhcCEEEecCChhHHHHHHHc----CCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 278 AASDCMLGKIGYGTVSEALAY----KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~~----G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
..+|++|+-||-||+..++.. ++|++.|+.. ..|.+.+ +.++++.++|+++++.
T Consensus 71 ~~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G---------------~lGFL~~---~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 71 DGCELVLVLGGDGTILRAAELARAADVPVLGVNLG---------------HVGFLAE---AEAEDLDEAVERVVDR 128 (306)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC---------------CCceecc---CCHHHHHHHHHHHHcC
Confidence 468999999999999988764 8999999842 1233332 2345677788888744
No 312
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=24.39 E-value=1.2e+02 Score=26.09 Aligned_cols=30 Identities=27% Similarity=0.362 Sum_probs=24.3
Q ss_pred EecCCCCcccHHHHHHHHHHHHHCCCeEEEE
Q 002674 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (894)
Q Consensus 20 ~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~ 50 (894)
++++|.| .|..|-..+|+.|.++|..|...
T Consensus 20 ~i~HG~~-eh~~ry~~~a~~L~~~G~~V~~~ 49 (79)
T PF12146_consen 20 VIVHGFG-EHSGRYAHLAEFLAEQGYAVFAY 49 (79)
T ss_pred EEeCCcH-HHHHHHHHHHHHHHhCCCEEEEE
Confidence 3555543 79999999999999999988754
No 313
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=24.23 E-value=11 Score=42.96 Aligned_cols=25 Identities=32% Similarity=0.271 Sum_probs=21.8
Q ss_pred CCCCCCCccccc--cccceeccCCCCC
Q 002674 428 CTPEGDSTVKLS--TEDFEILHGDCQG 452 (894)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~ 452 (894)
..+.+++|+|++ +||+|||+.||+.
T Consensus 340 ~~g~~~~liR~svGlE~~~dl~~dl~~ 366 (369)
T cd00614 340 AAGITPGLVRLSVGIEDVEDLIADLEQ 366 (369)
T ss_pred hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 457788999999 8999999999875
No 314
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=24.17 E-value=1.3e+02 Score=32.92 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=28.3
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 23 ~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
.-.|.|=.+-+..||.+|.+.|++|.++-..+
T Consensus 11 ~KGGvGKTt~~~nLa~~la~~g~kVLliD~D~ 42 (295)
T PRK13234 11 GKGGIGKSTTSQNTLAALVEMGQKILIVGCDP 42 (295)
T ss_pred CCCCccHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 67789999999999999999999999995544
No 315
>PRK09028 cystathionine beta-lyase; Provisional
Probab=23.67 E-value=15 Score=42.14 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=22.1
Q ss_pred CCCCCCCccccc--cccceeccCCCCCC
Q 002674 428 CTPEGDSTVKLS--TEDFEILHGDCQGL 453 (894)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (894)
+++.+.++||++ |||+|||+.||+..
T Consensus 357 ~~~~~~~liR~svGlEd~~dLi~Dl~~A 384 (394)
T PRK09028 357 NWDFSKPLIRLHIGLEDVDDLIADLEAG 384 (394)
T ss_pred hhcCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 355677899999 89999999999874
No 316
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=23.65 E-value=3.4e+02 Score=30.01 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=27.6
Q ss_pred cCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 22 v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
.-.+|.|--+-.-+|...|+++||.|-++.-.|
T Consensus 57 TG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDP 89 (323)
T COG1703 57 TGVPGAGKSTLIEALGRELRERGHRVAVLAVDP 89 (323)
T ss_pred cCCCCCchHHHHHHHHHHHHHCCcEEEEEEECC
Confidence 344568889999999999999999999886555
No 317
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=23.51 E-value=5.7e+02 Score=26.18 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=27.6
Q ss_pred ecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 21 ~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
++-..|.|=.+-+..||..+..+|..|.+++...
T Consensus 6 lvGptGvGKTTt~aKLAa~~~~~~~~v~lis~D~ 39 (196)
T PF00448_consen 6 LVGPTGVGKTTTIAKLAARLKLKGKKVALISADT 39 (196)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHTT--EEEEEEST
T ss_pred EECCCCCchHhHHHHHHHHHhhccccceeecCCC
Confidence 4556789999999999999999999999998653
No 318
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=23.48 E-value=1.5e+02 Score=31.47 Aligned_cols=44 Identities=18% Similarity=0.374 Sum_probs=36.4
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTS 60 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~~~~~~~ 60 (894)
+|.|+.+-.|.|-.+-++.||-+|.++|-.|+++=..|+..+..
T Consensus 3 vItf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl~~ 46 (231)
T PF07015_consen 3 VITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQPLAK 46 (231)
T ss_pred eEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcHHH
Confidence 34558888999999999999999999999999997776544433
No 319
>PRK07308 flavodoxin; Validated
Probab=22.99 E-value=1.5e+02 Score=28.55 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=27.2
Q ss_pred CceEEEEEecCCCCcccHHH-HHHHHHHHHHCCCeEEEEe
Q 002674 13 SKHLVFAYYVTGHGFGHATR-VVEVVRNLISAGHDVHVVT 51 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r-~laLA~~L~~~Gh~Vt~~~ 51 (894)
|.+++|+|++ -.||... +..|++.|.+.|++|.+.-
T Consensus 1 m~~~~IvY~S---~tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 1 MALAKIVYAS---MTGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred CceEEEEEEC---CCchHHHHHHHHHHHHHhCCCceEEEe
Confidence 6678887764 3478766 4588999999999988754
No 320
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=22.96 E-value=1.1e+02 Score=32.35 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=22.7
Q ss_pred HHHHhcCCCcEEEECC---chhHHHHHHH----hCCcEEEEecC
Q 002674 111 VEWLNSIKADLVVSDV---VPVACRAAAD----AGIRSVCVTNF 147 (894)
Q Consensus 111 ~~~L~~~~PDlVV~D~---~~~a~~aA~~----lgIP~V~isn~ 147 (894)
.+.+++|+||++|.-. ..+|...|+. .|+|+|.+++-
T Consensus 52 ~~~~~~~~pdf~I~isPN~~~PGP~~ARE~l~~~~iP~IvI~D~ 95 (276)
T PF01993_consen 52 TKMLKEWDPDFVIVISPNAAAPGPTKAREMLSAKGIPCIVISDA 95 (276)
T ss_dssp HHHHHHH--SEEEEE-S-TTSHHHHHHHHHHHHSSS-EEEEEEG
T ss_pred HHHHHhhCCCEEEEECCCCCCCCcHHHHHHHHhCCCCEEEEcCC
Confidence 4556789999999653 3445555543 58999999873
No 321
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=22.73 E-value=3.8e+02 Score=30.18 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=24.3
Q ss_pred cCEEEecCChhH---HHHHHHcCCcEEEEe
Q 002674 280 SDCMLGKIGYGT---VSEALAYKLPFVFVR 306 (894)
Q Consensus 280 ~d~~I~~~G~~t---~~Eal~~G~P~l~ip 306 (894)
-|++|++||+-+ +.-|...|+|++...
T Consensus 92 Pdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e 121 (352)
T PRK12446 92 PDVIFSKGGFVSVPVVIGGWLNRVPVLLHE 121 (352)
T ss_pred CCEEEecCchhhHHHHHHHHHcCCCEEEEC
Confidence 799999999986 889999999998864
No 322
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=22.70 E-value=1.2e+02 Score=27.44 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=30.6
Q ss_pred HhCCCCCCcEEEEEcCCCCCh----------hhhHHhhCCCCcEEEEe-CCCCC----CCCCCeE
Q 002674 216 ELGIEDDVKLLILNFGGQPAG----------WKLKEEYLPSGWKCLVC-GASDS----QLPPNFI 265 (894)
Q Consensus 216 ~lgl~~~~p~Vlvs~Gs~~~~----------~~l~~~Ll~~~~~~vv~-G~~~~----~lp~nv~ 265 (894)
|+--++++|.|.+++|+.... ..+++++...+..+|++ +.... .+|+||+
T Consensus 33 Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~lP~nVR 97 (97)
T PF06722_consen 33 WLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELGELPDNVR 97 (97)
T ss_dssp GGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCCS-TTTEE
T ss_pred ccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhCCCCCCCC
Confidence 444457899999999986542 12344555677777765 33221 2788875
No 323
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=22.43 E-value=4.6e+02 Score=30.69 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=29.3
Q ss_pred EecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 20 ~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
+.-++.|.|=.+-+..|+++|+++|++|..+-+.+
T Consensus 4 I~gT~t~vGKT~vt~~L~~~L~~~G~~V~~fK~g~ 38 (449)
T TIGR00379 4 IAGTSSGVGKTTISTGIMKALSRRKLRVQPFKVGP 38 (449)
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHCCCceeEEccCC
Confidence 35567778889999999999999999999886544
No 324
>CHL00067 rps2 ribosomal protein S2
Probab=22.38 E-value=4.5e+02 Score=27.77 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=23.6
Q ss_pred CCCcEEEE-CC--chhHHHHHHHhCCcEEEEec
Q 002674 117 IKADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (894)
Q Consensus 117 ~~PDlVV~-D~--~~~a~~aA~~lgIP~V~isn 146 (894)
..||+||. |. ...+..=|..+|||+|.+.|
T Consensus 160 ~~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivD 192 (230)
T CHL00067 160 KLPDIVIIIDQQEEYTALRECRKLGIPTISILD 192 (230)
T ss_pred cCCCEEEEeCCcccHHHHHHHHHcCCCEEEEEe
Confidence 36999995 44 55677788999999999854
No 325
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=22.26 E-value=95 Score=34.18 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=26.3
Q ss_pred HhhcCEEEecCChhHHHHHHH----cCCcEEEEeCC
Q 002674 277 MAASDCMLGKIGYGTVSEALA----YKLPFVFVRRD 308 (894)
Q Consensus 277 l~~~d~~I~~~G~~t~~Eal~----~G~P~l~ip~~ 308 (894)
|..+|++|+.||-||..=|.. -.+|+|++..+
T Consensus 103 i~waD~VisvGGDGTfL~Aasrv~~~~~PViGvNtD 138 (395)
T KOG4180|consen 103 IRWADMVISVGGDGTFLLAASRVIDDSKPVIGVNTD 138 (395)
T ss_pred CchhhEEEEecCccceeehhhhhhccCCceeeecCC
Confidence 678999999999999775544 57999999854
No 326
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=22.04 E-value=1.6e+02 Score=32.40 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=38.0
Q ss_pred hhcCEEEecCChhHHHHHHH----cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhc
Q 002674 278 AASDCMLGKIGYGTVSEALA----YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~----~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~ 349 (894)
..+|++|+-||-||+.+++. .++|++.|... ..|.+. ++..+++.++|+++++.
T Consensus 62 ~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGIn~G---------------~lGFL~---~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 62 ARADLAVVLGGDGTMLGIGRQLAPYGVPLIGINHG---------------RLGFIT---DIPLDDMQETLPPMLAG 119 (291)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC---------------Cccccc---cCCHHHHHHHHHHHHcC
Confidence 35899999999999999876 37899998742 113323 33345677788777643
No 327
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=21.77 E-value=1.7e+02 Score=33.59 Aligned_cols=39 Identities=10% Similarity=0.210 Sum_probs=26.7
Q ss_pred hHHHHHHHHhcCCCcEEEECCch--------hHHH---HHHHhCCcEEEE
Q 002674 106 ILKDEVEWLNSIKADLVVSDVVP--------VACR---AAADAGIRSVCV 144 (894)
Q Consensus 106 ll~~~~~~L~~~~PDlVV~D~~~--------~a~~---aA~~lgIP~V~i 144 (894)
...+..+++++.+||++|....| ++.+ +...++||++.-
T Consensus 64 a~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vta 113 (431)
T TIGR01917 64 AKAKVLEMIKGANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTA 113 (431)
T ss_pred HHHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 33556788999999999976422 2222 335689999864
No 328
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.65 E-value=83 Score=32.76 Aligned_cols=32 Identities=19% Similarity=0.088 Sum_probs=27.7
Q ss_pred ecCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002674 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (894)
Q Consensus 21 ~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~ 52 (894)
+..-+|.|-.+++..||++|++++|+|...+.
T Consensus 6 lTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 6 LTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 45667899999999999999999999977654
No 329
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=21.65 E-value=1.8e+02 Score=33.56 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCcEEEECCch--------hHHH---HHHHhCCcEEEE
Q 002674 107 LKDEVEWLNSIKADLVVSDVVP--------VACR---AAADAGIRSVCV 144 (894)
Q Consensus 107 l~~~~~~L~~~~PDlVV~D~~~--------~a~~---aA~~lgIP~V~i 144 (894)
..+..+++++.+||++|....| ++.+ +...++||+|.-
T Consensus 65 ~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~ 113 (431)
T TIGR01918 65 VARVLEMLKDKEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTS 113 (431)
T ss_pred HHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 3556788999999999976422 2222 345689999864
No 330
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.61 E-value=1.7e+02 Score=32.10 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=38.7
Q ss_pred hhcCEEEecCChhHHHHHHH----cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEccCCCCcccHHHHHHHHHhcC
Q 002674 278 AASDCMLGKIGYGTVSEALA----YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (894)
Q Consensus 278 ~~~d~~I~~~G~~t~~Eal~----~G~P~l~ip~~~~~eq~~na~~l~~~G~g~~~~~~~~~~~~l~~~l~~ll~~~ 350 (894)
..+|++|+-||-||+..++. .++|++.|.... . |.+. ++.++++.++|+++++..
T Consensus 63 ~~~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------l--GFLt---~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 63 GSADMVISIGGDGTFLRTATYVGNSNIPILGINTGR-------------L--GFLA---TVSKEEIEETIDELLNGD 121 (292)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEecCC-------------C--Cccc---ccCHHHHHHHHHHHHcCC
Confidence 46899999999999988877 378999998421 2 3222 233456777888887543
No 331
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=21.39 E-value=3.2e+02 Score=30.40 Aligned_cols=32 Identities=25% Similarity=0.212 Sum_probs=26.5
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 23 ~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
+..|.|=.--.+.|++.|+++|++|.+++.+.
T Consensus 37 tvGGTGKTP~v~~La~~l~~~G~~~~IlSRGY 68 (311)
T TIGR00682 37 SVGGTGKTPVVVWLAELLKDRGLRVGVLSRGY 68 (311)
T ss_pred ccCCcChHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 33567777778899999999999999998654
No 332
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=21.34 E-value=1.5e+02 Score=31.60 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=32.7
Q ss_pred CceEEEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 13 m~~~~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|+.+-| ...-.|.|=.+-+.+||..|++.|..|..+=..|
T Consensus 1 M~~iai--~s~kGGvG~TTltAnLA~aL~~~G~~VlaID~dp 40 (243)
T PF06564_consen 1 MKVIAI--VSPKGGVGKTTLTANLAWALARLGESVLAIDLDP 40 (243)
T ss_pred CcEEEE--ecCCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 555555 5667789999999999999999999999885554
No 333
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=20.90 E-value=8.3e+02 Score=24.24 Aligned_cols=29 Identities=31% Similarity=0.444 Sum_probs=25.3
Q ss_pred CCCCcccHHHHHHHHHHHHHCCCeEEEEe
Q 002674 23 TGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (894)
Q Consensus 23 ~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~ 51 (894)
+|.|.|=.+-++.+|-....+|+.|.|+.
T Consensus 9 ~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQ 37 (159)
T cd00561 9 TGNGKGKTTAALGLALRALGHGYRVGVVQ 37 (159)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 57799999999999999999999999863
No 334
>TIGR00162 conserved hypothetical protein TIGR00162. This ortholog set includes MJ1210 from Methanococcus jannaschii and AF0525 from Archaeoglobus fulgidus, but not MJ0106 or AF1251.
Probab=20.82 E-value=3.8e+02 Score=27.35 Aligned_cols=61 Identities=13% Similarity=0.202 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEEe--CCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 002674 614 AGTILVLMTELGVRFEDSISMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHI 684 (894)
Q Consensus 614 ~g~i~~~~~~~g~~~~~G~~i~i~s--~iP~g~GLgSSAAl~va~~~al~~l~~~~l~~~~la~~a~~~E~~~ 684 (894)
.|++.......|.+ ++.+..+. .+|. .-...+++.+++.++|++++-++|.+-|.+.|..+
T Consensus 99 ~glLl~~a~~~gi~---ai~L~~e~p~y~pD-------P~AA~alL~~L~kllgl~vd~~~L~e~Ae~ie~~~ 161 (188)
T TIGR00162 99 SGLLLGVSELEGIP---GACLMGETPGYMID-------PKAAKAVLEVLCKMLSLEVSVEALEERAKEMEKII 161 (188)
T ss_pred HHHHHHHHHHCCCC---eEEEEEeCCCCCCC-------hHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 34444444555653 55555553 3333 22334556679999999999999999888888654
No 335
>PRK05920 aromatic acid decarboxylase; Validated
Probab=20.82 E-value=1.4e+02 Score=31.11 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=27.7
Q ss_pred EEEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 17 ~Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
+|++.++ |......+..+.+.|.+.|++|+++....
T Consensus 5 rIllgIT--Gsiaa~ka~~lvr~L~~~g~~V~vi~T~~ 40 (204)
T PRK05920 5 RIVLAIT--GASGAIYGVRLLECLLAADYEVHLVISKA 40 (204)
T ss_pred EEEEEEe--CHHHHHHHHHHHHHHHHCCCEEEEEEChh
Confidence 3444665 44567899999999999999999886544
No 336
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=20.61 E-value=1e+03 Score=29.47 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=29.5
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeC
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~ 52 (894)
|++..++.|.|=..-++.|++.|+++|.+|.++-+
T Consensus 5 l~I~~T~t~~GKT~vslgL~~~L~~~G~~Vg~fKP 39 (684)
T PRK05632 5 IYLAPTGTGVGLTSVSLGLMRALERKGVKVGFFKP 39 (684)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 33356788899999999999999999999988753
No 337
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=20.50 E-value=1.7e+02 Score=27.74 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=25.0
Q ss_pred EEEEecCCCCccc--HHHHHHHHHHHHHCCC-eEEEE
Q 002674 17 VFAYYVTGHGFGH--ATRVVEVVRNLISAGH-DVHVV 50 (894)
Q Consensus 17 ~Il~~v~~~G~GH--v~r~laLA~~L~~~Gh-~Vt~~ 50 (894)
++.+.++++-+|+ ...++.+|++|.+.|| +|.++
T Consensus 2 ~~~Ivvt~ppYg~q~a~~A~~fA~all~~gh~~v~iF 38 (126)
T COG1553 2 KYTIVVTGPPYGTESAFSALRFAEALLEQGHELVRLF 38 (126)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3444677777776 7888999999999974 55554
No 338
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=20.31 E-value=1.2e+02 Score=31.22 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=24.4
Q ss_pred CCCcEEEE-CC--chhHHHHHHHhCCcEEEEec
Q 002674 117 IKADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (894)
Q Consensus 117 ~~PDlVV~-D~--~~~a~~aA~~lgIP~V~isn 146 (894)
..||+||. |. ...+..=|..+|||+|.+.|
T Consensus 107 ~~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~D 139 (196)
T TIGR01012 107 REPEVVVVTDPRADHQALKEASEVGIPIVALCD 139 (196)
T ss_pred CCCCEEEEECCccccHHHHHHHHcCCCEEEEee
Confidence 46999995 54 67788889999999999854
No 339
>TIGR00708 cobA cob(I)alamin adenosyltransferase. Alternate name: corrinoid adenosyltransferase.
Probab=20.25 E-value=6.1e+02 Score=25.58 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=26.1
Q ss_pred ecCCCCcccHHHHHHHHHHHHHCCCeEEEE
Q 002674 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (894)
Q Consensus 21 ~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~ 50 (894)
+.+|.|.|-.+-++.+|-....+|+.|.++
T Consensus 10 v~~g~GkGKtt~a~g~a~ra~~~g~~v~iv 39 (173)
T TIGR00708 10 VHTGNGKGKTTAAFGMALRALGHGKKVGVI 39 (173)
T ss_pred EECCCCCChHHHHHHHHHHHHHCCCeEEEE
Confidence 346889999999999999999999999766
No 340
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=20.13 E-value=1.4e+02 Score=27.42 Aligned_cols=34 Identities=24% Similarity=0.349 Sum_probs=25.6
Q ss_pred HHHhhcCEEEec-----CChhHHHH---HHHcCCcEEEEeCC
Q 002674 275 DFMAASDCMLGK-----IGYGTVSE---ALAYKLPFVFVRRD 308 (894)
Q Consensus 275 ~ll~~~d~~I~~-----~G~~t~~E---al~~G~P~l~ip~~ 308 (894)
+.|..||++|.. .+.||.+| |.+.|+|++++-..
T Consensus 57 ~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d 98 (113)
T PF05014_consen 57 EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED 98 (113)
T ss_dssp HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence 466789999863 46799999 46789999999754
No 341
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=20.09 E-value=1.6e+02 Score=29.31 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=30.9
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHCCCeEEEEeCCC
Q 002674 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (894)
Q Consensus 18 Il~~v~~~G~GHv~r~laLA~~L~~~Gh~Vt~~~~~~ 54 (894)
|.+.....|.|=.+-+..||..|.++|+.|.++-..+
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~ 37 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDP 37 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEEST
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccCc
Confidence 3456778889999999999999999999999996544
Done!