BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002675
(894 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C895|BRE1B_ARATH E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana
GN=HUB2 PE=1 SV=2
Length = 900
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/916 (59%), Positives = 700/916 (76%), Gaps = 38/916 (4%)
Query: 1 MENEEELKEPEKKKPHLNLNSHSHSHSHSLSP-TMARNT-PSSPSSNK------------ 46
MEN+E EP +KKPHL S+SP +MARN+ PS P +
Sbjct: 1 MENQES-DEPMQKKPHL---------LDSVSPNSMARNSSPSHPIAKSVSFFDCDFSLLC 50
Query: 47 --------SVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQL 98
VD+ VLQ QNQKLVQQLD QK +L +E+KI+ELQ QTSYD+ LI+VNQL
Sbjct: 51 LRLVDYEIDVDATVLQLQNQKLVQQLDLQKKQLYDVESKIQELQLNQTSYDDELISVNQL 110
Query: 99 WNLFVDDLILLGVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKD 158
WN VDDLILLGVRAG L LD ++ R +P ++ FLCRLLQV+S+++S D
Sbjct: 111 WNQLVDDLILLGVRAGANQEALNYLDIVDKKR--VPPCAADETFLCRLLQVDSLDTSKSD 168
Query: 159 GILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDD 218
+++ VEEALA RHSS ELM E ID Q+ K +SI+++ H S EDA IQLS I+D
Sbjct: 169 EVVRKVEEALALRHSSTMELMGLFENTIDTQKTKAESISQSLHAVKSTEDATIQLSSIND 228
Query: 219 MMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHLAGELEETMAELEESRR 278
+MKEE+KNL E+++ +H++HKE+++QI+ YISSHS DQ+E++HL G+LEE AELEE+RR
Sbjct: 229 LMKEESKNLREMIDALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRR 288
Query: 279 KLVSLKMQKDIASGTHSLVPAAAMVNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRL 338
KL++LKMQKD A H PA A NGS+SPEK P D + L+ELKDS++E KI+A RL
Sbjct: 289 KLITLKMQKDAACEGHVTSPAIA--NGSLSPEK-PVD-KTKLRELKDSIDEIKIMAEGRL 344
Query: 339 SEVEEAQQDNINLSKQLENLQNELNDDKYVHSSRLYNLVNDQLQHWNVEVERYKALTDSL 398
SE++ +Q+ N++LS+Q ++++NEL DD+Y++SSRLY+L+ND++ HWN E++RYK LT+++
Sbjct: 345 SELQASQEYNLSLSRQCQDIENELKDDQYIYSSRLYSLINDRIHHWNAELDRYKILTEAI 404
Query: 399 LIDRSLVLRREKEINVRAESADAARNTVDDSESRIERLEVQLQKSIIEKNDLGLKMEEAI 458
+RS V+RR+KE+N+RAES +AA + SRIE LE +LQ IIEKN L L+ EEAI
Sbjct: 405 QAERSFVMRRDKELNLRAESLEAANHKTTTVGSRIEVLEKKLQSCIIEKNGLELETEEAI 464
Query: 459 QDSGRKDIKAEFRVMASALSKEMGMMEAQLNRWKETADEALSLREKAVSLKVSLSAKTNE 518
QDS R+DIK+EF MAS LSKEM MMEAQL RWK+TA +AL LRE+A SL+VSLS K +E
Sbjct: 465 QDSERQDIKSEFIAMASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNKADE 524
Query: 519 QKRLTDKCVEQMAEIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAH 578
QK L DKC +QMAEIKSLKALIEKL K+KL+ Q + + +E D R L EIK+S+R+A
Sbjct: 525 QKGLEDKCAKQMAEIKSLKALIEKLLKEKLQLQNLASICTRECNDDRGLAEIKDSQRKAQ 584
Query: 579 SQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEA 638
+QAE LKN LDEH LELRVKAA+E E+ACQ+RL+ A+AEI EL +LD SER+V+EL+E
Sbjct: 585 AQAEELKNVLDEHFLELRVKAAHETESACQERLATAKAEIAELRTQLDLSEREVLELKEG 644
Query: 639 MKSKDREAEAYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFL 698
+K K++EAEA IAEMETIGQA+EDMQTQNQHLLQQVAERDD NIKLVSESVKTK +
Sbjct: 645 IKVKEQEAEASIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKHAYNTH 704
Query: 699 LSEKQALARQLQQINALVESAKLRILHAEEQMKACLTEALRYNSEDRHLAVNLETTKWEL 758
LSEKQ + +QL Q+NA VE+ K RI H EEQMK C +EA + EDRHL ++LETTKWE+
Sbjct: 705 LSEKQVMEKQLHQVNASVENFKARIAHNEEQMKGCFSEAYKLIQEDRHLVISLETTKWEV 764
Query: 759 ADAEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAELT 818
ADA+KE +WLKSAV+SS+KEYEQI R+T+D++ EL++ER E+KKLEEELME+N ++ EL
Sbjct: 765 ADADKEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKELEELG 824
Query: 819 SETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCP 878
SE+ EAAI +LQ+E+K+CK ILKCGVCFDRPKEVVI KC+HLFC CIQR+LEIRHRKCP
Sbjct: 825 SESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLEIRHRKCP 884
Query: 879 GCGTAFGQSDVRFVKI 894
GCGTAFGQ+DVR VK+
Sbjct: 885 GCGTAFGQNDVRLVKM 900
>sp|Q336R3|BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
japonica GN=BRE1B PE=2 SV=1
Length = 844
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/847 (54%), Positives = 641/847 (75%), Gaps = 3/847 (0%)
Query: 48 VDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLFVDDLI 107
+D+A LQY+NQKLVQQL++QK ++++LE K KEL+++Q SYD LI +N++WN +DDL+
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
Query: 108 LLGVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEA 167
LLGVRAGG N LQ LD E + +S+ S P E++FL RLL + ++ + + VEEA
Sbjct: 61 LLGVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEA 120
Query: 168 LASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNL 227
LA R+S+ LMK ++E Q+ +++S++ A + + S+ED I+ L +D +KE NL
Sbjct: 121 LALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNL 180
Query: 228 HEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHLAGELEETMAELEESRRKLVSLKMQK 287
+ + II+ KH++Y D+IE + ++ S + E++ L+GELEE+MAELEESRRKL L++Q
Sbjct: 181 RQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQT 240
Query: 288 DIASGTHSLVPAAAMVNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQD 347
S ++ P VNGSVS +K +D M ++LKD+VEEAK LAA+RL E+ E Q+D
Sbjct: 241 GGGSLMNTSAPNG--VNGSVSTDK-SSDKGMGWRDLKDAVEEAKTLAANRLFELHETQED 297
Query: 348 NINLSKQLENLQNELNDDKYVHSSRLYNLVNDQLQHWNVEVERYKALTDSLLIDRSLVLR 407
N+ LSKQLE++Q++L D+ Y+ +S+ Y +++DQL H N E+ERY+ L + L ++ +++
Sbjct: 298 NLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQ 357
Query: 408 REKEINVRAESADAARNTVDDSESRIERLEVQLQKSIIEKNDLGLKMEEAIQDSGRKDIK 467
+E+E+ +AES DA + ++ +++IE LE ++QK + EKNDL +K EEA+QDSG+KD K
Sbjct: 358 KEEEMLAKAESVDAVQQSITTYKAKIEDLEHEIQKLMAEKNDLEIKAEEALQDSGKKDFK 417
Query: 468 AEFRVMASALSKEMGMMEAQLNRWKETADEALSLREKAVSLKVSLSAKTNEQKRLTDKCV 527
E VMA++LSKEM +++ Q+NR K+ A EAL+LRE+A L+ L+ K +EQK ++D+
Sbjct: 418 DEIHVMAASLSKEMELLDNQMNRSKDAASEALALREEADYLRTLLAKKIDEQKEISDRYN 477
Query: 528 EQMAEIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNA 587
Q+ EIKSLKALIE L ++K E Q ++DM G+E + R + EI+ESE RA QAE L+
Sbjct: 478 TQVTEIKSLKALIETLDQEKQELQFIVDMLGKECSESRAISEIEESENRARKQAEYLRKC 537
Query: 588 LDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAE 647
L+EH+LELRVKAANEAE ACQQRLS AEAE+ +L AK+DASERDVM+L+E+++ K+ E +
Sbjct: 538 LEEHNLELRVKAANEAETACQQRLSIAEAELEDLRAKVDASERDVMKLKESIRIKEAEVD 597
Query: 648 AYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALAR 707
+I+E+ETIGQA+EDMQTQNQHLLQQVA+RDD NIKLVS+SVK KQ LL+EK L +
Sbjct: 598 GHISEIETIGQAYEDMQTQNQHLLQQVADRDDFNIKLVSDSVKMKQAYGSLLAEKNMLQK 657
Query: 708 QLQQINALVESAKLRILHAEEQMKACLTEALRYNSEDRHLAVNLETTKWELADAEKELKW 767
QLQ +N+ +ES+KL+I EEQMK + +A++ +SE+RHLA++LE T E++DAEKELKW
Sbjct: 658 QLQHVNSSLESSKLKITSGEEQMKTYVAQAMKSSSENRHLAISLERTMLEVSDAEKELKW 717
Query: 768 LKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAELTSETGEAAIQ 827
L+SA S++KEYE Q+K +++ ELE ERNER KLEEE EV N+V+ELTSET E IQ
Sbjct: 718 LRSATGSAEKEYEINQKKIAELKMELERERNERIKLEEEYEEVKNEVSELTSETEETTIQ 777
Query: 828 KLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQS 887
KLQDEIK+CKAILKCGVCFDRPKEVVITKCFHLFC+PCIQRNLEIRHRKCPGCGT FGQS
Sbjct: 778 KLQDEIKECKAILKCGVCFDRPKEVVITKCFHLFCSPCIQRNLEIRHRKCPGCGTPFGQS 837
Query: 888 DVRFVKI 894
DVR VKI
Sbjct: 838 DVREVKI 844
>sp|A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
indica GN=BRE1B PE=3 SV=2
Length = 844
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/847 (54%), Positives = 641/847 (75%), Gaps = 3/847 (0%)
Query: 48 VDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLFVDDLI 107
+D+A LQY+NQKLVQQL++QK ++++LE K KEL+++Q SYD LI +N++WN +DDL+
Sbjct: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
Query: 108 LLGVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEA 167
LLGVRAGG N LQ LD E + +S+ S P E++FL RLL + ++ + + VEEA
Sbjct: 61 LLGVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEA 120
Query: 168 LASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNL 227
LA R+S+ LMK ++E Q+ +++S++ A + + S+ED I+ L +D +KE NL
Sbjct: 121 LALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNL 180
Query: 228 HEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHLAGELEETMAELEESRRKLVSLKMQK 287
+ + II+ KH++Y D+IE + ++ S + E++ L+GELEE+MAELEESRRKL L++Q
Sbjct: 181 RQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQT 240
Query: 288 DIASGTHSLVPAAAMVNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQD 347
S ++ P VNGSVS +K +D M ++LKD+VEEAK LAA+RL E+ E Q+D
Sbjct: 241 GGGSLMNTSAPNG--VNGSVSTDK-SSDKGMGWRDLKDAVEEAKTLAANRLFELHETQED 297
Query: 348 NINLSKQLENLQNELNDDKYVHSSRLYNLVNDQLQHWNVEVERYKALTDSLLIDRSLVLR 407
N+ LSKQLE++Q++L D+ Y+ +S+ Y +++DQL H N E+ERY+ L + L ++ +++
Sbjct: 298 NLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQ 357
Query: 408 REKEINVRAESADAARNTVDDSESRIERLEVQLQKSIIEKNDLGLKMEEAIQDSGRKDIK 467
+E+E+ +AES DA + ++ +++IE LE ++QK + EKNDL +K EEA+QDSG+KD K
Sbjct: 358 KEEEMLAKAESVDAVQQSITTYKAKIEDLEHEIQKLMAEKNDLEIKAEEALQDSGKKDFK 417
Query: 468 AEFRVMASALSKEMGMMEAQLNRWKETADEALSLREKAVSLKVSLSAKTNEQKRLTDKCV 527
E VMA++LSKEM +++ Q+NR K+ A EAL+LRE+A L+ L+ K +EQK ++D+
Sbjct: 418 DEIHVMAASLSKEMELLDNQMNRSKDAASEALALREEADYLRTLLAKKIDEQKEISDRYN 477
Query: 528 EQMAEIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNA 587
Q+ EIKSLKALIE L ++K E Q ++DM G+E + R + EI+ESE RA QAE L+
Sbjct: 478 TQVTEIKSLKALIETLDQEKQELQFIVDMLGKECSESRAISEIEESENRARKQAEYLRKC 537
Query: 588 LDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAE 647
L+EH+LELRVKAANEAE ACQQRLS AEAE+ +L AK+DASERDVM+L+E+++ K+ E +
Sbjct: 538 LEEHNLELRVKAANEAETACQQRLSIAEAELEDLRAKVDASERDVMKLKESIRIKEAEVD 597
Query: 648 AYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALAR 707
+I+E+ETIGQA+EDMQTQNQHLLQQVA+RDD NIKLVS+SVK KQ LL+EK L +
Sbjct: 598 GHISEIETIGQAYEDMQTQNQHLLQQVADRDDFNIKLVSDSVKMKQAYGSLLAEKNMLQK 657
Query: 708 QLQQINALVESAKLRILHAEEQMKACLTEALRYNSEDRHLAVNLETTKWELADAEKELKW 767
QLQ +N+ +ES+KL+I EEQMK + +A++ +SE+RHLA++LE T E++DAEKELKW
Sbjct: 658 QLQHVNSSLESSKLKITSGEEQMKTYVAQAMKSSSENRHLAISLERTMLEVSDAEKELKW 717
Query: 768 LKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAELTSETGEAAIQ 827
L+SA S++KEYE Q+K +++ ELE ERNER KLEEE EV N+V+ELTSET E IQ
Sbjct: 718 LRSATGSAEKEYEINQKKIAELKMELERERNERIKLEEEYEEVKNEVSELTSETEETTIQ 777
Query: 828 KLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQS 887
KLQDEIK+CKAILKCGVCFDRPKEVVITKCFHLFC+PCIQRNLEIRHRKCPGCGT FGQS
Sbjct: 778 KLQDEIKECKAILKCGVCFDRPKEVVITKCFHLFCSPCIQRNLEIRHRKCPGCGTPFGQS 837
Query: 888 DVRFVKI 894
DVR VKI
Sbjct: 838 DVREVKI 844
>sp|Q8RXD6|BRE1A_ARATH E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana
GN=HUB1 PE=1 SV=1
Length = 878
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 297/894 (33%), Positives = 504/894 (56%), Gaps = 29/894 (3%)
Query: 9 EPEKKKPHLNLNSHSHSHSHSLSPTMA----RNTPSS-PSSNKSVDSAVLQYQNQKLVQQ 63
EP++K+ H + S+SP+ A + P PSS +D+AVLQ+QN KL Q+
Sbjct: 6 EPDRKRRHFS----------SISPSEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQK 55
Query: 64 LDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLFVDDLILLGVRAGGGSNVLQKL 123
L++Q+ E LE K+ +++EKQ Y+ L TV++ W + VR S+ +
Sbjct: 56 LEAQQVECSILEDKLSQIKEKQLPYNSSLKTVHKSWEKLTASVESCSVRVSDSSSGAHRF 115
Query: 124 DSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEE-ALASRHSSARELMKFI 182
N+ S P+ ++ F+ RLL+ + ESSS + +EE + + + L +
Sbjct: 116 --VNKEDGSSPA--VKNDFINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNLV 171
Query: 183 EEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYA 242
D + +K + L +D QL+ + ++ E K+ ++ + +K K +
Sbjct: 172 AATEDLRCLKDELYPTVLRTNL-GKDLCGQLALSE--LESEIKSFRGDLDDVLVKFKSLS 228
Query: 243 DQIENYISSHSVDQAEIQHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAAAM 302
+++++ + + + +++ + GELE+ + EL++ L +L+ ++D +G + P ++
Sbjct: 229 RELQSHRDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERDATAG--AFFPVLSL 286
Query: 303 VNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNEL 362
N ++ R D + DLQ+++ ++E +LA+ RL +++ ++ + ++ NLQN+
Sbjct: 287 GN-KLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKS 345
Query: 363 NDDKYVHSSRLYNLVNDQLQHWNVEVERYKALTDSLLIDRSLVLRREKEINVRAESADAA 422
+ + SS+ + DQL+ V +Y AL + L +++ ++ +E+EIN++ E D +
Sbjct: 346 KSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVS 405
Query: 423 RNTVDDSESRIERLEVQLQKSIIEKNDLGLKMEEAIQDSGRKDIKAEFRVMASALSKEMG 482
R T ++SR+ L+ ++QK + EK + ++ ++ GRK+I A+ + + S+ +EM
Sbjct: 406 RKTSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMS 465
Query: 483 MMEAQLNRWKETADEALSLREKAVSLKVSLSAKTNEQKRLTDKCVEQMAEIKSLKALIEK 542
M +QLN +KETA SLR SL L KT E + L + + +++ L A +
Sbjct: 466 SMRSQLNNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNATVCD 525
Query: 543 LQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANE 602
L+ E ++ LDMY +E D RD+ E KE E RA + + LK++LDE +LELRVKAANE
Sbjct: 526 LKNSHEELKLFLDMYKRESTDARDIAEAKEQEYRAWAHVQSLKSSLDEQNLELRVKAANE 585
Query: 603 AEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETIGQAFED 662
AEA QQ L+AAEAEI +L K+D +RDV + + +KSK E Y++E++TIG A+ED
Sbjct: 586 AEAVSQQMLAAAEAEIADLRQKMDDCKRDVAKHSDILKSKHEEHGTYLSEIQTIGSAYED 645
Query: 663 MQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQINALVESAKLR 722
+ QNQ LL QV ERDD NIKL E + ++Q+Q LL +K + + +QQ +A +
Sbjct: 646 IVPQNQQLLLQVTERDDYNIKLFLEGITSRQMQDTLLIDKYIMDKDIQQGSAYASFLSKK 705
Query: 723 ILHAEEQMKACLTEALRYNSEDRHL-AVNLETTKWELADAEKELKWLKSAVTSSDKEYEQ 781
E+Q++ C T+ + +ED++ +V+LE + + AD L+ +S + S + EQ
Sbjct: 706 SSRIEDQLRFC-TDQFQKLAEDKYQKSVSLENLQKKRADIGNGLEQARSRLEESHSKVEQ 764
Query: 782 IQRKTEDMRKELENERNERKKLEEELMEVNNKVAELTSET-GEAAIQKLQDEIKDCKAIL 840
+ + ELE ER R+++EEE+ KV+ L S G +AIQKL+ E+ + K IL
Sbjct: 765 SRLDYGALELELEIERFNRRRIEEEMEIAKKKVSRLRSLIEGSSAIQKLRQELSEFKEIL 824
Query: 841 KCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI 894
KC C DRPKEVVITKC+HLFCNPC+Q+ R +KCP C +FG +D++ + I
Sbjct: 825 KCKACNDRPKEVVITKCYHLFCNPCVQKLTGTRQKKCPTCSASFGPNDIKPIYI 878
>sp|A2XW69|BRE1A_ORYSI E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp.
indica GN=BRE1A PE=3 SV=2
Length = 884
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 301/878 (34%), Positives = 475/878 (54%), Gaps = 17/878 (1%)
Query: 27 SHSLSPTMARNTPSSP---------SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAK 77
S S++P P SP S +K +D VL+Y+NQKL +QL++ K E ++LE K
Sbjct: 14 SSSVAP--GGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEAHKFEYRALENK 71
Query: 78 IKELQEKQTSYDEMLITVNQLWNLFVDDLILLGVRAGGGSNVLQKLDSENQTRDSIPSGP 137
L+EKQ +++E L VN W V DL G N N +D P
Sbjct: 72 FAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHNNVQKDGT-CAP 130
Query: 138 PEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIA 197
E L L++ + ESS +A S+A L D + + A
Sbjct: 131 IERDTLRSLVESGATESSGCLPGCHLGSDAPPLHLSTANALGDIFFPSSDLLQA-NEECA 189
Query: 198 EAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQA 257
A KL D QL + N+ + + + LKHK+ A+ +N S + +A
Sbjct: 190 LAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRA 249
Query: 258 EIQHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAAAMVNGSVSPEKRPADGR 317
E + L EL +ELEE+ KL +LK Q+D G +P + N S+ PE + D +
Sbjct: 250 EHRRLKEELASAASELEETNYKLAALKAQRDNTQGAR--IPYPTLGNKSM-PEDKVRDKQ 306
Query: 318 MDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNELNDDKYVHSSRLYNLV 377
++Q+L+ + +E L + RL E++ ++ I + ++ QN L D K + SS+ + LV
Sbjct: 307 REMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLV 366
Query: 378 NDQLQHWNVEVERYKALTDSLLIDRSLVLRREKEINVRAESADAARNTVDDSESRIERLE 437
ND+LQ E++ Y+ L + L +D+ + +E++ N++ + A+ ES I L+
Sbjct: 367 NDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYCESSIADLK 426
Query: 438 VQLQKSIIEKNDLGLKMEEAIQDSGRKDIKAEFRVMASALSKEMGMMEAQLNRWKETADE 497
+QK EKN L LK+EEA ++ GR + +F+ + S++ +EMG M++++ + KE + E
Sbjct: 427 KDIQKLRDEKNMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMTKHKEASLE 486
Query: 498 ALSLREKAVSLKVSLSAKTNEQKRLTDKCVEQMAEIKSLKALIEKLQKDKLESQIMLDMY 557
SLR + SL LS K + + + + ++I L+++I L++ E ++ DMY
Sbjct: 487 LNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKELKLFADMY 546
Query: 558 GQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAE 617
+E D R++ME ++ E + LK++LDE LE RVKAANEAEA QQRL+ AEAE
Sbjct: 547 KRESTDSREIMESRDREFLEWAHVHALKSSLDESKLEQRVKAANEAEAITQQRLATAEAE 606
Query: 618 IIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETIGQAFEDMQTQNQHLLQQVAER 677
I E KL S +D++ L +KSK E EAY E+E IGQA+ED+Q QNQ LLQQ+ ER
Sbjct: 607 IAESGQKLGTSRKDLVSLSHMLKSKQEECEAYRVEVECIGQAYEDIQAQNQQLLQQIIER 666
Query: 678 DDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQINALVESAKLRILHAEEQMKACLTEA 737
DD N K+ E VK KQ Q L E +L R LQQ ++L++ +I+ E+Q+K
Sbjct: 667 DDDNTKIFMEGVKAKQTQDALHLETYSLRRNLQQESSLMDLYNQKIVSLEDQLKMWSDRV 726
Query: 738 LRYNSEDRHLAVNLETTKWELADAEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENER 797
+ + +V+L + +L D ++ + L ++ + + D+ ELE ER
Sbjct: 727 GKLQEDGWQQSVSLSNYQRKLVDVHRDAQKLMQSLDGIQANVGSSRLEVADLLIELEKER 786
Query: 798 NERKKLEEELMEVNNKVAELTSETGEAAI-QKLQDEIKDCKAILKCGVCFDRPKEVVITK 856
+K++E++L ++ K + L ++ E+A+ +KL+ E+K+ + ILKCG+C DR KEVVITK
Sbjct: 787 FSKKRIEDDLEVMSRKASSLRAKARESAVLEKLRHEVKEYRGILKCGICHDRQKEVVITK 846
Query: 857 CFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI 894
C+HLFCN CIQ++L R R+CP C +FG +DV+ + I
Sbjct: 847 CYHLFCNQCIQKSLGNRQRRCPSCSLSFGANDVKPIYI 884
>sp|Q7XU27|BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp.
japonica GN=BRE1A PE=2 SV=3
Length = 884
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 300/878 (34%), Positives = 475/878 (54%), Gaps = 17/878 (1%)
Query: 27 SHSLSPTMARNTPSSP---------SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAK 77
S S++P P SP S +K +D VL+Y+NQKL +QL++ K E ++LE K
Sbjct: 14 SSSVAP--GGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEAHKFEYRALENK 71
Query: 78 IKELQEKQTSYDEMLITVNQLWNLFVDDLILLGVRAGGGSNVLQKLDSENQTRDSIPSGP 137
L+EKQ +++E L VN W V DL G N N +D P
Sbjct: 72 FAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHNNVQKDGT-CAP 130
Query: 138 PEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIA 197
E L L++ + ESS +A S+A L D + + A
Sbjct: 131 IERDTLRSLVESGATESSGCLPGCHLGSDAPPLHLSTANALGDIFFPSSDLLQA-NEECA 189
Query: 198 EAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQA 257
A KL D QL + N+ + + + LKHK+ A+ +N S + +A
Sbjct: 190 LAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRA 249
Query: 258 EIQHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAAAMVNGSVSPEKRPADGR 317
E + L EL +ELEE+ KL +LK Q+D G +P + N ++ PE + D +
Sbjct: 250 EHRRLKEELASAASELEETNYKLAALKAQRDNTQGAR--IPYPTLGNKNM-PEDKVRDKQ 306
Query: 318 MDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNELNDDKYVHSSRLYNLV 377
++Q+L+ + +E L + RL E++ ++ I + ++ QN L D K + SS+ + LV
Sbjct: 307 REMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLV 366
Query: 378 NDQLQHWNVEVERYKALTDSLLIDRSLVLRREKEINVRAESADAARNTVDDSESRIERLE 437
ND+LQ E++ Y+ L + L +D+ + +E++ N++ + A+ ES I L+
Sbjct: 367 NDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYCESSIADLK 426
Query: 438 VQLQKSIIEKNDLGLKMEEAIQDSGRKDIKAEFRVMASALSKEMGMMEAQLNRWKETADE 497
+QK EKN L LK+EEA ++ GR + +F+ + S++ +EMG M++++ + KE + E
Sbjct: 427 KDIQKLCDEKNMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMTKHKEASLE 486
Query: 498 ALSLREKAVSLKVSLSAKTNEQKRLTDKCVEQMAEIKSLKALIEKLQKDKLESQIMLDMY 557
SLR + SL LS K + + + + ++I L+++I L++ E ++ DMY
Sbjct: 487 LNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKELKLFADMY 546
Query: 558 GQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAE 617
+E D R++ME ++ E + LK++LDE LE RVKAANEAEA QQRL+ AEAE
Sbjct: 547 KRESTDSREIMESRDREFLEWAHVHALKSSLDESKLEQRVKAANEAEAITQQRLATAEAE 606
Query: 618 IIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETIGQAFEDMQTQNQHLLQQVAER 677
I E KL S +D++ L +KSK E EAY E+E IGQA+ED+Q QNQ LLQQ+ ER
Sbjct: 607 IAESGQKLGTSRKDLVSLSHMLKSKQEECEAYRVEVECIGQAYEDIQAQNQQLLQQIIER 666
Query: 678 DDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQINALVESAKLRILHAEEQMKACLTEA 737
DD N K+ E VK KQ Q L E +L R LQQ ++L++ +I+ E+Q+K
Sbjct: 667 DDDNTKIFMEGVKAKQTQDALHLETYSLRRNLQQESSLMDLYNQKIVSLEDQLKMWSDRV 726
Query: 738 LRYNSEDRHLAVNLETTKWELADAEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENER 797
+ + +V+L + +L D ++ + L ++ + + D+ ELE ER
Sbjct: 727 GKLQEDGWQQSVSLSNYQRKLVDVHRDAQKLMQSLDGIQANVGSSRLEVADLLIELEKER 786
Query: 798 NERKKLEEELMEVNNKVAELTSETGEAAI-QKLQDEIKDCKAILKCGVCFDRPKEVVITK 856
+K++E++L ++ K + L ++ E+A+ +KL+ E+K+ + ILKCG+C DR KEVVITK
Sbjct: 787 FSKKRIEDDLEVMSRKASSLRAKARESAVLEKLRHEVKEYRGILKCGICHDRQKEVVITK 846
Query: 857 CFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI 894
C+HLFCN CIQ++L R R+CP C +FG +DV+ + I
Sbjct: 847 CYHLFCNQCIQKSLGNRQRRCPSCSLSFGANDVKPIYI 884
>sp|Q4R7K7|BRE1B_MACFA E3 ubiquitin-protein ligase BRE1B OS=Macaca fascicularis GN=RNF40
PE=2 SV=1
Length = 1001
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 55/383 (14%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
+K L+A ++K Q+ + E +++LDMY ++ RD +++ +ER+A ++ + L++ + E
Sbjct: 652 LKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELE 711
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
R ++ A+ +R+ AE +I L KL A+++ E EA ++E
Sbjct: 712 ERDRRESKKIADGDALRRIRQAEEQIEHLQRKLGATKQ--------------EEEALLSE 757
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQI 712
M+ GQAFEDMQ QN LLQQ+ E+DD N KL+SE +K Q+ L EK L Q+ +
Sbjct: 758 MDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGL 817
Query: 713 NALVESAKLRILHAEEQMKA-------------CLTEALRYNSEDRHLAVNL-ETTKWEL 758
+ V++ L + EE+ +A ++AL N A L E K +L
Sbjct: 818 KSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQL 877
Query: 759 ADAEKELKWLKSAVTSS----DKEYEQIQRKTED---MRKELENERNERKKLEEELMEVN 811
+ L+ ++ + S +KE ++R ED +R++LE +R +EV
Sbjct: 878 EHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRK---------VEVY 928
Query: 812 NKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLE 871
E+ LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E
Sbjct: 929 ADADEI-----------LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYE 977
Query: 872 IRHRKCPGCGTAFGQSDVRFVKI 894
R RKCP C AFG D + I
Sbjct: 978 ARQRKCPKCNAAFGAHDFHRIYI 1000
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 38/57 (66%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLW 99
SS + +D VLQ++N+KL ++L+ ++ L +I++L+++Q + D L+ VN+ W
Sbjct: 42 SSTEEIDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYW 98
>sp|Q8CJB9|BRE1B_RAT E3 ubiquitin-protein ligase BRE1B OS=Rattus norvegicus GN=Rnf40 PE=1
SV=1
Length = 1002
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 55/383 (14%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
+K L+A ++K Q+ + E +++LDMY ++ RD +++ +ER+A ++ + L++ + +
Sbjct: 653 LKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRDLE 712
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
R ++ A+ +R+ AE +I L KL A+++ E EA ++E
Sbjct: 713 ERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQ--------------EEEALLSE 758
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQI 712
M+ GQAFEDMQ QN LLQQ+ E+DD N KL+SE +K Q+ L EK L Q+ +
Sbjct: 759 MDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGL 818
Query: 713 NALVESAKLRILHAEEQMKA-------------CLTEALRYNSEDRHLAVNL-ETTKWEL 758
+ V++ L + EE+ +A ++AL N A L E K +L
Sbjct: 819 KSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQL 878
Query: 759 ADAEKELKWLKSAVTSS----DKEYEQIQRKTED---MRKELENERNERKKLEEELMEVN 811
+ L+ ++ + S +KE ++R ED +R++LE +R +EV
Sbjct: 879 EHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRK---------VEVY 929
Query: 812 NKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLE 871
E+ LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E
Sbjct: 930 ADADEI-----------LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYE 978
Query: 872 IRHRKCPGCGTAFGQSDVRFVKI 894
R RKCP C AFG D V I
Sbjct: 979 ARQRKCPKCNAAFGAHDFHRVYI 1001
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 39/57 (68%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLW 99
SS + +DS VLQ++N+KL ++L+ ++ L +I++L+++Q + D L+ VN+ W
Sbjct: 42 SSTEEMDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYW 98
>sp|Q3U319|BRE1B_MOUSE E3 ubiquitin-protein ligase BRE1B OS=Mus musculus GN=Rnf40 PE=2 SV=2
Length = 1001
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 193/383 (50%), Gaps = 55/383 (14%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
+K L+A ++K Q+ + E +++LDMY ++ RD +++ +ER+A ++ + L++ + E
Sbjct: 652 LKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELE 711
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
R ++ A+ +R+ AE +I L KL A+++ E EA ++E
Sbjct: 712 ERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQ--------------EEEALLSE 757
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQI 712
M+ GQAFEDMQ QN LLQQ+ E+DD N KL+SE +K Q+ L EK L Q+ +
Sbjct: 758 MDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGL 817
Query: 713 NALVESAKLRILHAEEQMKA-------------CLTEALRYNSEDRHLAVNL-ETTKWEL 758
+ V++ L + EE+ +A ++AL N A L E K +L
Sbjct: 818 KSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQL 877
Query: 759 ADAEKELKWLKSAVTSS----DKEYEQIQRKTED---MRKELENERNERKKLEEELMEVN 811
+ L+ ++ + S +KE ++R ED +R++LE +R +EV
Sbjct: 878 EHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRK---------VEVY 928
Query: 812 NKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLE 871
E+ LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E
Sbjct: 929 ADADEI-----------LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYE 977
Query: 872 IRHRKCPGCGTAFGQSDVRFVKI 894
R RKCP C AFG D V I
Sbjct: 978 ARQRKCPKCNAAFGAHDFHRVYI 1000
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 39/57 (68%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLW 99
SS + +DS VLQ++N+KL ++L+ ++ L +I++L+++Q + D L+ VN+ W
Sbjct: 42 SSTEEMDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYW 98
>sp|O75150|BRE1B_HUMAN E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens GN=RNF40 PE=1 SV=4
Length = 1001
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 55/383 (14%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
+K L+A ++K Q+ + E +++LDMY ++ RD +++ +ER+A ++ + L++ + E
Sbjct: 652 LKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELE 711
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
R ++ A+ +R+ AE +I L KL A+++ E EA ++E
Sbjct: 712 ERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQ--------------EEEALLSE 757
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQI 712
M+ GQAFEDMQ QN LLQQ+ E+DD N KL+SE +K Q+ L EK L Q+ +
Sbjct: 758 MDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGL 817
Query: 713 NALVESAKLRILHAEEQMKA-------------CLTEALRYNSEDRHLAVNL-ETTKWEL 758
+ V++ L + EE+ +A ++AL N A L E K +L
Sbjct: 818 KSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQL 877
Query: 759 ADAEKELKWLKSAVTSS----DKEYEQIQRKTED---MRKELENERNERKKLEEELMEVN 811
+ L+ ++ + S +KE ++R ED +R++LE +R +EV
Sbjct: 878 EHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRK---------VEVY 928
Query: 812 NKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLE 871
E+ LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E
Sbjct: 929 ADADEI-----------LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYE 977
Query: 872 IRHRKCPGCGTAFGQSDVRFVKI 894
R RKCP C AFG D + I
Sbjct: 978 ARQRKCPKCNAAFGAHDFHRIYI 1000
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLF 102
SS + +D VLQ++N+KL ++L+ ++ L +I++L+++Q + D L+ VN+ W
Sbjct: 42 SSTEEMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQL 101
Query: 103 ---VDDLILLGVRAGGGSNVLQKLDS-ENQTRDSIPSGPP-----EDMFLCRLLQ----- 148
V+ L+ G S+ + + E T D P P D L +L
Sbjct: 102 DETVEALLRCHESQGELSSAPEAPGTQEGPTCDGTPLPEPGTSELRDPLLMQLRPPLSEP 161
Query: 149 ----VNSIESSSKD-------GILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIA 197
V ++ +SS + G +++ + A++ ++ L + +EE+ QRV ++ +
Sbjct: 162 ALAFVVALGASSSEEVELELQGRMEFSKAAVSRVVEASDRLQRRVEEL--CQRVYSRGDS 219
Query: 198 EAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQI 245
E E +A+ +L + + +++ A L E I L++ E D++
Sbjct: 220 EPLSE--AAQAHTRELGRENRRLQDLATQLQEKHHRISLEYSELQDKV 265
>sp|Q5RAU7|BRE1B_PONAB E3 ubiquitin-protein ligase BRE1B OS=Pongo abelii GN=RNF40 PE=2 SV=1
Length = 1001
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 55/383 (14%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
+K L+A ++K Q+ + E +++LDMY ++ RD +++ +ER+A ++ + L++ + E
Sbjct: 652 LKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELE 711
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
R ++ A+ +R+ AE +I L KL A+++ E EA ++E
Sbjct: 712 ERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQ--------------EEEALLSE 757
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQI 712
M+ GQAFEDMQ QN LLQQ+ E+DD N KL+SE +K Q+ L EK L Q+ +
Sbjct: 758 MDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGL 817
Query: 713 NALVESAKLRILHAEEQMKA-------------CLTEALRYNSEDRHLAVNL-ETTKWEL 758
+ V++ L + EE+ +A ++AL N A L E K +L
Sbjct: 818 KSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQL 877
Query: 759 ADAEKELKWLKSAVTSS----DKEYEQIQRKTED---MRKELENERNERKKLEEELMEVN 811
+ L+ ++ + S +KE ++R ED +R++LE +R +EV
Sbjct: 878 EHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRK---------VEVY 928
Query: 812 NKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLE 871
E+ LQ+EIK+ KA L C C R K+ V+TKCFH+FC C++ E
Sbjct: 929 ADADEI-----------LQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYE 977
Query: 872 IRHRKCPGCGTAFGQSDVRFVKI 894
R RKCP C AFG D + I
Sbjct: 978 ARQRKCPKCNAAFGAHDFHRIYI 1000
Score = 40.0 bits (92), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 38/57 (66%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLW 99
SS + +D VLQ++N+KL ++L+ ++ L +I++L+++Q + D L+ VN+ W
Sbjct: 42 SSTEEMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYW 98
>sp|Q5ZLS3|BRE1A_CHICK E3 ubiquitin-protein ligase BRE1A OS=Gallus gallus GN=RNF20 PE=2
SV=1
Length = 984
Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 196/365 (53%), Gaps = 19/365 (5%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
IK LKA ++K Q+ + E +++LDMY ++ RD +++ +E++A ++ E L+
Sbjct: 635 IKQLKAELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKAKAELEELRQ------ 688
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
RVK + E ++++ +A + K+ A E + L++ + +E EA ++E
Sbjct: 689 ---RVKELEDKEKKESKKMADEDA-----LRKIRAVEEQIEYLQKKLAMAKQEEEALLSE 740
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQQI 712
M+ GQAFEDMQ QN L+QQ+ E+DD N KL+SE +K+ Q+ L EK+ LA Q+ +
Sbjct: 741 MDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTL 800
Query: 713 NALVESAKLRILHAEEQMKACLTEALRYNSEDRHLAVN-LETTKWELADAEKELKWLKSA 771
V+ A+L+++ E+ + L ++ ++ L LE K + DA + LK+
Sbjct: 801 KTQVD-AQLQVVRKLEEKEHLLQSSIGTGEKELGLRTQALEMNKRKAMDAAQLADDLKTQ 859
Query: 772 VTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAELTSETG--EAAIQKL 829
+ + K+ Q + + R E E K+ EE++ + K+ E T + + L
Sbjct: 860 LELAQKKLHDFQDEIVESRVTREKEMFNFKRAEEDISRLRRKL-ETTKKPDMVPNCDEIL 918
Query: 830 QDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDV 889
+EIKD KA L C C R K+ V+TKCFH+FC C++ + R RKCP C AFG +D
Sbjct: 919 MEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDF 978
Query: 890 RFVKI 894
+ I
Sbjct: 979 HRIYI 983
>sp|Q9VRP9|BRE1_DROME E3 ubiquitin-protein ligase Bre1 OS=Drosophila melanogaster GN=Bre1
PE=1 SV=2
Length = 1044
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 181/370 (48%), Gaps = 17/370 (4%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLK---NALD 589
++ LKA ++K D+ E +++LDMY +D RD +++ +E++ S+ E L+ L
Sbjct: 671 VRDLKAQLKKALNDQKEMKLLLDMYKGVSKDQRDKVQLMATEKKLRSEIEELRQQLKKLQ 730
Query: 590 EHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDR----- 644
E E R K A+E ++L + E+ + +A ++ + R
Sbjct: 731 ESKREERKKLADEEALRKIKQLEEQKYELQKQMANHKPTDNSWGSGAPGTANYTRPFVGS 790
Query: 645 -EAEAYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQ 703
E EA + EME GQAFEDMQ QN L+QQ+ E+DD N KL+SE +K Q+ L EK
Sbjct: 791 HEEEALLNEMEVTGQAFEDMQEQNSRLIQQLREKDDANFKLMSERIKANQLHKLLREEKT 850
Query: 704 ALARQLQQINALVESAKLRILHAEEQMKACLTEALRYNSE--DRHLAVNLETTK-WELAD 760
L Q+ +E+ + + EE+ ++ E R A+ + K E A
Sbjct: 851 VLEDQMATATTQIEAMHIVLRKLEEKERSLQATVASIEKELMLRQQAMEMHKRKAIESAQ 910
Query: 761 AEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAELTS- 819
+ +LK + KE +Q+ + LE E + K+L+EEL + K +
Sbjct: 911 SAADLKLHLEKYHAQMKEAQQV---VAEKTSSLEAEAYKTKRLQEELAQFKRKAERMKKM 967
Query: 820 -ETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCP 878
+G + + +EI++ K L C C + K+ V++KCFH+FC C++ E R RKCP
Sbjct: 968 EMSGTTIDEVMIEEIREYKETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCP 1027
Query: 879 GCGTAFGQSD 888
C AFG +D
Sbjct: 1028 KCNCAFGAND 1037
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 28/164 (17%)
Query: 24 HSHSHSLSPTMARNTPSSPSSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQE 83
H H + P S+ + +D VL++QN+KL Q+++ + L +I++L++
Sbjct: 30 HFEPHLIGPV---------STLEEMDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEK 80
Query: 84 KQTSYDEMLITVNQLWNLFVDDLILLGVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFL 143
+QT D +L VN+ WN +D+ +L LQ+ D+E T D + + ++
Sbjct: 81 RQTQDDAVLNVVNRYWNQLNEDIRVL----------LQRFDAE--TADELENRNENEVTT 128
Query: 144 CRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVID 187
L Q+++ + D E LA+R ++ + I +VID
Sbjct: 129 SFLAQLSTWDKEELD-------EKLANRVQVSKRAVAKIVQVID 165
>sp|Q5VTR2|BRE1A_HUMAN E3 ubiquitin-protein ligase BRE1A OS=Homo sapiens GN=RNF20 PE=1
SV=2
Length = 975
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 198/406 (48%), Gaps = 61/406 (15%)
Query: 513 SAKTNEQKRLTDKCVEQMAEIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKE 572
SAK E+ + D ++ IK LK ++K Q+ + E +++LDMY ++ RD +++
Sbjct: 606 SAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMA 665
Query: 573 SERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDV 632
+E+++ ++ E L+ L + + + + A+ +++ A E +I L KL
Sbjct: 666 AEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKL------- 718
Query: 633 MELEEAMKSKDREAEAYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTK 692
AM + E EA ++EM+ GQAFEDMQ QN L+QQ+ E+DD N KL+SE +K+
Sbjct: 719 -----AMAKQ--EEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSN 771
Query: 693 QVQSF-----------LLSEKQALARQLQQINALVESAKL---RILHAEEQMKACLTEAL 738
Q+ +L+ K + QLQ + L E L I E+++ T+AL
Sbjct: 772 QIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKEL-GLRTQAL 830
Query: 739 RYNSEDRHLAVNL-ETTKWELADAEKELKWLKSAV----TSSDKEYEQIQRKTED---MR 790
N A L + K +L A+K+L + + + +K+ +R ED +R
Sbjct: 831 EMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLR 890
Query: 791 KELENER--NERKKLEEELMEVNNKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDR 848
++LE + + K +E LME EIKD KA L C C R
Sbjct: 891 RKLETTKKPDNVPKCDEILME----------------------EIKDYKARLTCPCCNMR 928
Query: 849 PKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI 894
K+ V+TKCFH+FC C++ + R RKCP C AFG +D + I
Sbjct: 929 KKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 154/347 (44%), Gaps = 47/347 (13%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLF 102
SS + +D LQ +N+KL + LD ++ L I++L+ +Q + D L+ VN+ W+ F
Sbjct: 41 SSTEELDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQF 100
Query: 103 VDDLILLGVRA----GGGSNVLQK-----------LDSENQTRDSIPSG---PPEDMFLC 144
+++ ++ R G G + ++ DS + +D G P FL
Sbjct: 101 DENIRIILKRYDLEQGLGDLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLA 160
Query: 145 RLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKL 204
L +S E S+ L R S+R + I V D K + E KL
Sbjct: 161 TLASSSSEEMESQ----------LQERVESSRRAVSQIVTVYD----KLQEKVELLSRKL 206
Query: 205 SAEDAII---QLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQH 261
++ D +I + +++ + +E L E+ +++ KH+ + + S ++ +
Sbjct: 207 NSGDNLIVEEAVQELNSFLAQENMRLQELTDLLQEKHRTMSQEFSKLQSKVETAESRVSV 266
Query: 262 LAGELEETMAELEESRRKLVSLK------MQKDIASGTHSLVPAAAMVNGSVSPEKRPAD 315
L +++ ++++ R++ L +++ + G +++ G+++ R
Sbjct: 267 LESMIDDLQWDIDKIRKREQRLNRHLAEVLERVNSKGYKVYGAGSSLYGGTITINARK-- 324
Query: 316 GRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNEL 362
+E+ +EE K LA +RL E+E+ +QD ++ Q E L+ EL
Sbjct: 325 ----FEEMNAELEENKELAQNRLCELEKLRQDFEEVTTQNEKLKVEL 367
>sp|A2VDP1|BRE1A_BOVIN E3 ubiquitin-protein ligase BRE1A OS=Bos taurus GN=RNF20 PE=2 SV=1
Length = 975
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 198/406 (48%), Gaps = 61/406 (15%)
Query: 513 SAKTNEQKRLTDKCVEQMAEIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKE 572
SAK E+ + D ++ IK LK ++K Q+ + E +++LDMY ++ RD +++
Sbjct: 606 SAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMA 665
Query: 573 SERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDV 632
+E+++ ++ E L+ L + + + + A+ +++ A E +I L KL
Sbjct: 666 AEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKL------- 718
Query: 633 MELEEAMKSKDREAEAYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTK 692
AM + E EA ++EM+ GQAFEDMQ QN L+QQ+ E+DD N KL+SE +K+
Sbjct: 719 -----AMAKQ--EEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSN 771
Query: 693 QVQSF-----------LLSEKQALARQLQQINALVESAKL---RILHAEEQMKACLTEAL 738
Q+ +L+ K + QLQ + L E L I E+++ T+AL
Sbjct: 772 QIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKEL-GLRTQAL 830
Query: 739 RYNSEDRHLAVNL-ETTKWELADAEKELKWLKSAV----TSSDKEYEQIQRKTED---MR 790
N A L + K +L A+K+L + + + +K+ +R ED +R
Sbjct: 831 EMNKRKAMEAAQLADDLKAQLEMAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLR 890
Query: 791 KELENER--NERKKLEEELMEVNNKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDR 848
++LE + + K +E LME EIKD KA L C C R
Sbjct: 891 RKLETTKKPDNVPKCDEILME----------------------EIKDYKARLTCPCCNMR 928
Query: 849 PKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI 894
K+ V+TKCFH+FC C++ + R RKCP C AFG +D + I
Sbjct: 929 KKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 157/348 (45%), Gaps = 49/348 (14%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLF 102
SS + +D LQ +N+KL + LD ++ L I++L+ +Q + D L+ VN+ W+ F
Sbjct: 41 SSTEELDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQF 100
Query: 103 VDDLILLGVRA----GGGSNVLQK-----------LDSENQTRDSIPSG---PPEDMFLC 144
+++ ++ R G G + ++ DS + +D G P FL
Sbjct: 101 DENIRIILKRYDLEQGLGDLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLA 160
Query: 145 RLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKL 204
L +S E S+ L R S+R + I V D K + E KL
Sbjct: 161 TLASSSSEEMESQ----------LQERVESSRRAVSQIVTVYD----KLQEKVELLSRKL 206
Query: 205 SAEDAII---QLSKIDDMMKEEAKNLHEVMEIIHLKH----KEYA---DQIENYISSHSV 254
++ D+++ + +++ + +E L E+ +++ KH +E++ ++E S SV
Sbjct: 207 NSGDSLMVEEAVQELNSFLAQENTRLQELTDLLQEKHCTMSQEFSKLQSKVETAESRVSV 266
Query: 255 DQAEIQHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAAAMVNGSVSPEKRPA 314
++ I L ++++ + R L + +++ + G +++ G+++ R
Sbjct: 267 LESMIDDLQWDIDKIRKREQRLNRHLAEV-LERVNSKGYKVYGAGSSLYGGTITINARK- 324
Query: 315 DGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNEL 362
+E+ +EE K LA +R E+E+ +QD ++ Q E L+ EL
Sbjct: 325 -----FEEMNAELEENKELAQNRHCELEKLRQDFEEVTSQNEKLKVEL 367
>sp|Q5DTM8|BRE1A_MOUSE E3 ubiquitin-protein ligase BRE1A OS=Mus musculus GN=Rnf20 PE=1
SV=2
Length = 973
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 189/386 (48%), Gaps = 61/386 (15%)
Query: 533 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHS 592
IK LK ++K Q+ + E +++LDMY ++ RD +++ +E+++ ++ E L+ L +
Sbjct: 624 IKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLE 683
Query: 593 LELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAE 652
+ + + A+ +++ A E +I L KL AM + E EA ++E
Sbjct: 684 DKEKKENKKMADEDALRKIRAVEEQIEYLQKKL------------AMAKQ--EEEALLSE 729
Query: 653 METIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSF-----------LLSE 701
M+ GQAFEDMQ QN L+QQ+ E+DD N KL+SE +K+ Q+ +L+
Sbjct: 730 MDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTL 789
Query: 702 KQALARQLQQINALVESAKL---RILHAEEQMKACLTEALRYNSEDRHLAVNL-ETTKWE 757
K + QLQ + L E L I E+++ T+AL N A L + K +
Sbjct: 790 KTQVDAQLQVVRKLEEKEHLLQSNIGTGEKEL-GLRTQALEMNKRKAMEAAQLADDLKAQ 848
Query: 758 LADAEKELKWLKSAV----TSSDKEYEQIQRKTED---MRKELENER--NERKKLEEELM 808
L A+K+L + + + +K+ +R ED +R++LE + + K +E LM
Sbjct: 849 LELAQKKLHDFQDEIVENSVTKEKDLFNFKRAQEDISRLRRKLETTKKPDNVPKCDEILM 908
Query: 809 EVNNKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQR 868
E EIKD KA L C C R K+ V+TKCFH+FC C++
Sbjct: 909 E----------------------EIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKT 946
Query: 869 NLEIRHRKCPGCGTAFGQSDVRFVKI 894
+ R RKCP C AFG +D + I
Sbjct: 947 RYDTRQRKCPKCNAAFGANDFHRIYI 972
Score = 41.6 bits (96), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 155/348 (44%), Gaps = 49/348 (14%)
Query: 43 SSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQEKQTSYDEMLITVNQLWNLF 102
SS + +D LQ +N+KL + LD ++ L I++L+ +Q + D L+ VN+ W+ F
Sbjct: 41 SSTEELDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQF 100
Query: 103 VDDLILLGVRA----GGGSNVLQK-----------LDSENQTRDSIPSGP---PEDMFLC 144
+++ ++ R G G + ++ DS + +D G P FL
Sbjct: 101 DENIRIILKRYDLDQGLGDLLTERKALVVPEPEPDSDSNQERKDDRERGDGQEPAFSFLA 160
Query: 145 RLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKL 204
L +S E S+ L R S+R + I V D K + + KL
Sbjct: 161 TLASSSSEEMESQ----------LQERVESSRRAVSQIVTVYD----KLQEKVDLLSRKL 206
Query: 205 SAEDAII---QLSKIDDMMKEEAKNLHEVMEIIHLKH----KEYA---DQIENYISSHSV 254
++ D +I + +++ + +E L E+ +++ KH +E+ ++E S SV
Sbjct: 207 NSGDNLIVEEAVQELNSFLAQENVRLQELTDLLQEKHHTMSQEFCKLQGKVETAESRVSV 266
Query: 255 DQAEIQHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAAAMVNGSVSPEKRPA 314
++ I L ++++ + R L + +++ + G +++ G+++ R
Sbjct: 267 LESMIDDLQWDIDKIRKREQRLNRHLAEV-LERVNSKGYKVYGAGSSLYGGTITINARK- 324
Query: 315 DGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNEL 362
+E+ +EE K LA +R E+E+ +QD ++ Q E L+ EL
Sbjct: 325 -----FEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQNEKLKVEL 367
>sp|Q86KL1|BRE1_DICDI Probable E3 ubiquitin-protein ligase bre1 OS=Dictyostelium discoideum
GN=bre1 PE=3 SV=1
Length = 1080
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 641 SKDREAEAYIAEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQV----QS 696
S+ +E EA + E++++G+A+E M QN L +Q+++++D + L++E++K++Q +
Sbjct: 814 SQKQELEALVMEIDSMGKAYEQMLEQNTRLTKQLSDKEDTHAHLMAENIKSQQTIRNSKE 873
Query: 697 FLLSEKQALARQLQQINALVESAKLRILHAEEQMKACLTEALRYNSEDRH-LAVNLETTK 755
L+ ++ L R +++ + E ++ E+ L + L +ED H + +LE K
Sbjct: 874 IQLAIEEKLNRNEEKLKSQGE-----LMQKIEEKSNILQKQLSKVTEDLHSCSFDLEKHK 928
Query: 756 WELADAEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVA 815
+ + LK+ + ++++K +D LE E ++ K+L+EE + K+
Sbjct: 929 RFVRENNAHSLELKTQLDHLSNLNAELKKKADDSIFALEREIDKAKRLDEEKQLLKKKLE 988
Query: 816 ELTS-------------ETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFC 862
+ TS ++E+K L+C +C DR K VI KCFH+FC
Sbjct: 989 KATSANNNNNNNNNNNNNNNNNNSSSSEEELKLINQRLRCTICNDRQKNYVIAKCFHVFC 1048
Query: 863 NPCIQRNLEIRHRKCPGCGTAFGQSDV 889
CI N++ R R+CP C AF ++DV
Sbjct: 1049 KECIYSNIDTRKRRCPSCNRAFAETDV 1075
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 133/299 (44%), Gaps = 39/299 (13%)
Query: 23 SHSHSHSLSPTMARNTPSSPSSNKSVDSAVLQYQNQKLVQQLDSQKHELQSLEAKIKELQ 82
S S S +++ + S P +D ++ +QN+ + +++ QK E+ E KIK+L
Sbjct: 17 SESQRPSKKISLSSSEASVPIGGPPIDQNLILFQNRAMKVRVEEQKIEINDREQKIKQLN 76
Query: 83 EKQTSYDEMLITVNQLWNLFVDDLILLGVRA---GGGSNVLQKLDSENQTRDSIPSGPPE 139
K Y E + + ++W+ L LL R N+L K D+ ++ + + S E
Sbjct: 77 TKIHQYKENISCLCRVWDQLNSGLDLLINRVDFENAMDNLLPK-DNITESFEFLSSYITE 135
Query: 140 DMFL---CRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQ-RVKTKS 195
+ L L Q + + +AL H+ L KF+ ++ ++ +K+
Sbjct: 136 PVTLDEKYTLDQSLQKKVQKTQSTFSKISKALEKEHT----LSKFVFRLLKSKDGIKSND 191
Query: 196 IAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVD 255
I EKL ED +D + ++ + + + + + ++ K+ DQ ++H D
Sbjct: 192 I-----EKLLKED--------NDKLSKQNQYIQNIYDKVQIQFKQLTDQ-----TTHLAD 233
Query: 256 QAEI-----QHLAGELEETMAELEESRRKLVSLKMQKDIASGTHSLVPAAAMVNGSVSP 309
QA I + L ELE++ EL R++++ K+Q + +P+ ++ GS P
Sbjct: 234 QAAIYQQNNKELKLELEKSQDELTIERKRVI--KLQDETLRTPQVKIPSPSL--GSNIP 288
>sp|Q60YN5|BRE1_CAEBR E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis briggsae
GN=rfp-1 PE=3 SV=1
Length = 828
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 19/253 (7%)
Query: 652 EMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSFLLSEKQALARQLQ- 710
E+E + E+ Q +N L + +++D N+K+++E + QVQS + + + L + Q
Sbjct: 585 ELEVVCLTIEEEQERNAQLFMEKRDQEDRNLKMMNERMIQNQVQSRMREKLECLESKAQT 644
Query: 711 --QINALVESAKLRILHAEEQMKACLTEALRYNSEDRHLAVNL------ETTKWELADAE 762
QI + E K A +++ LTE L++ + + N+ +T + A E
Sbjct: 645 DAQIAKMHEFEK----KASDEVLNKLTENLQFKTSEVTRLSNMMEVHRKQTQELGFARDE 700
Query: 763 KELKWLKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAELT-SET 821
++K V + + +Q Q +E+E + +R++ EEEL V K +++
Sbjct: 701 NQVK-----VDRCEAQLKQYQDLYGSKSREVEEAKFKRQRAEEELELVRVKYERAKRNDS 755
Query: 822 GEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCG 881
+ Q LQ+ + K L C C RPK+ ++ KC+HLFC CI+ + R RKCP C
Sbjct: 756 AQTGDQVLQEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCN 815
Query: 882 TAFGQSDVRFVKI 894
+ FG +D + I
Sbjct: 816 SNFGANDFHRIFI 828
>sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis elegans
GN=rfp-1 PE=1 SV=2
Length = 837
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 29/259 (11%)
Query: 652 EMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSF-LLSEKQALARQLQ 710
E+E IG A E+ Q +N L + E++D N+K++++ + Q Q+F L EK +
Sbjct: 592 ELEAIGTAVEEEQERNAQLYIEKREQEDRNLKMMND--RMIQNQTFNRLREKLSCLESKA 649
Query: 711 QINALVESAKLRILH--AEEQMKACLTEALRYNSEDRHLAVNLETTKWELADAEKELKWL 768
Q +A + AK+ A E++ L+E++++ S + NL E+ K +
Sbjct: 650 QTDAQI--AKMHEFEKKANEELVTKLSESVQFKSAELTRLTNL---------MEQHRKNI 698
Query: 769 KSAVTSSDK----------EYEQIQRKTEDMRKELENERNERKKLEEELMEVN---NKVA 815
+ S D+ + +QIQ +E+E+ + +R++ EEEL + +V
Sbjct: 699 QEVGMSRDENQIKADRCEGQMKQIQELYAAKAREIEDFKFKRQRAEEELETLRIKYERVK 758
Query: 816 ELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHR 875
S ++ Q L++ + K L C C RPK+ ++ KC+HLFC CI+ + R R
Sbjct: 759 RNESVPAQSGDQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQR 818
Query: 876 KCPGCGTAFGQSDVRFVKI 894
KCP C + FG +D + I
Sbjct: 819 KCPKCNSNFGANDFHRIFI 837
>sp|Q4P3X7|BRE1_USTMA E3 ubiquitin-protein ligase BRE1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=BRE1 PE=3 SV=1
Length = 817
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 838 AILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDV 889
A+L+C C +R + ++TKC+H FC+ CI ++ R RKCP C AF SDV
Sbjct: 760 ALLQCSSCKERYRNRILTKCYHTFCSECIDSRVQTRQRKCPHCALAFAVSDV 811
>sp|Q6BWW6|BRE1_DEBHA E3 ubiquitin-protein ligase BRE1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BRE1 PE=3 SV=2
Length = 691
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 29/257 (11%)
Query: 651 AEMETIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQ-------VQSFLLSEKQ 703
+E++ I QAF++ + + L V +++++ KL E K Q ++ L SE +
Sbjct: 441 SEIKEIEQAFQETRENSLSKLMSVTDQENMVKKLTIEKTKADQKYFASMRLKDSLSSENK 500
Query: 704 ALARQLQQINALVESA---------KLRIL-HAEEQMKACLTEALRYNSEDRHLAVNLET 753
L Q+ + LV K+ IL + K AL+ NS+ L +L
Sbjct: 501 ILKTQINKSQELVSKLNDLEKSYLDKIEILTKSNNDFKIIRQSALQENSK---LQESLRA 557
Query: 754 TKWELADAEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENERN-ERKKLEEELMEVNN 812
A EKEL +K DK +++Q T +EL NE+N KLE +L +
Sbjct: 558 IDVRKASLEKELSGMK------DKYSDKVQENTS-FTQEL-NEKNLMMGKLEHKLKSTES 609
Query: 813 KVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEI 872
+ + + + +Q+ + +++ ++I KC VC K+ IT C H+FC+ C Q L
Sbjct: 610 LLKKYKTNNTSSILQEDERQLEALRSIAKCSVCSKNWKDTAITVCGHVFCSGCTQERLAA 669
Query: 873 RHRKCPGCGTAFGQSDV 889
R R+CP C F +D+
Sbjct: 670 RLRRCPTCNKGFSANDL 686
>sp|P0CQ62|BRE1_CRYNJ E3 ubiquitin-protein ligase BRE1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BRE1 PE=3 SV=1
Length = 820
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 788 DMRKELENERNERKKLEEELMEVNNKVAELTSETG----EAAIQKLQDEIKDCKAILKCG 843
+ R +L++E + + K+ ++L E + VA S+TG E AI + +D++ +LKC
Sbjct: 713 EARAKLQDEADGQMKIIKKLKERQDAVA-AASQTGMSDHEWAITQERDKLLK---LLKCS 768
Query: 844 VCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDV 889
C K+ VI KC H FC C+++ + R RKCP CG AF + D+
Sbjct: 769 CCEQNFKQQVIVKCMHTFCKQCLEQRIASRQRKCPACGLAFAKEDI 814
>sp|P0CQ63|BRE1_CRYNB E3 ubiquitin-protein ligase BRE1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BRE1 PE=3 SV=1
Length = 820
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 788 DMRKELENERNERKKLEEELMEVNNKVAELTSETG----EAAIQKLQDEIKDCKAILKCG 843
+ R +L++E + + K+ ++L E + VA S+TG E AI + +D++ +LKC
Sbjct: 713 EARAKLQDEADGQMKIIKKLKERQDAVA-AASQTGMSDHEWAITQERDKLLK---LLKCS 768
Query: 844 VCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDV 889
C K+ VI KC H FC C+++ + R RKCP CG AF + D+
Sbjct: 769 CCEQNFKQQVIVKCMHTFCKQCLEQRIASRQRKCPACGLAFAKEDI 814
>sp|Q5A4X0|BRE1_CANAL E3 ubiquitin-protein ligase BRE1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=BRE1 PE=3 SV=1
Length = 681
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 764 ELKWLKSAVTSSDKEYEQIQRKTEDMRKELEN--ERNERK-----KLEEELMEVNNKVAE 816
ELK L A + +E E++ K E KE + E N+++ KL+++L N + +
Sbjct: 544 ELKTLNIAQDALHQEVERVNAKLESTLKEHTDLQESNKKRELELAKLQKQLQSTENILQK 603
Query: 817 LTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRK 876
+ + +Q+ + +++ ++I KC VC K+ IT C H+FC+ C Q L R R+
Sbjct: 604 YKTNNTNSLLQEDEQQLEALRSIAKCSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRR 663
Query: 877 CPGCGTAFGQSDV 889
CP C F +D+
Sbjct: 664 CPSCNRGFSANDL 676
>sp|Q6LFN2|ZNRF1_PLAF7 RING finger protein PFF0165c OS=Plasmodium falciparum (isolate 3D7)
GN=PFF0165c PE=2 SV=1
Length = 1103
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 840 LKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDVR 890
L C VC + + +I KC H++CN CI NL+ R+RKCP C F + D++
Sbjct: 1048 LICSVCMENFRNYIIIKCGHIYCNNCIFNNLKTRNRKCPQCKVPFDKKDLQ 1098
>sp|Q6CF78|BRE1_YARLI E3 ubiquitin-protein ligase BRE1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=BRE1 PE=3 SV=1
Length = 700
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 815 AELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRH 874
A+LT + ++ DEI + ++I C +C K+ + C H+FC+ C Q L+ R
Sbjct: 621 AKLTKQIELSSFGGSSDEIDELRSIAMCSLCSKNWKDTALKVCGHVFCHQCAQDRLDARL 680
Query: 875 RKCPGCGTAFGQSDVRFVKI 894
RKCP C F Q+D+ V +
Sbjct: 681 RKCPNCNKPFSQNDLLTVHL 700
>sp|Q757D9|BRE1_ASHGO E3 ubiquitin-protein ligase BRE1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BRE1
PE=3 SV=1
Length = 643
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 46/320 (14%)
Query: 610 RLSAAEAEIIELVAKLDA--SERDVMELEEAMKSKDREA-------------EAYIAEME 654
R+ A E++ VA L+A S+ D++E E M + +E +A + E++
Sbjct: 335 RIRTARDELLSKVAVLEAQKSKSDMLEDLEKMLALQQEQLKALSEHKPEPARDAVMKELQ 394
Query: 655 TIGQAFEDMQTQNQHLLQQVAERDDLNIKLVSESVKTKQVQSF---------LLSEKQAL 705
+ +AF+++ + + ++ L KL E KTK Q + +L E + L
Sbjct: 395 DLEKAFKELSQYSNKKYSEYVNQESLMSKLTVE--KTKADQKYFAAMRSKDSILIENKNL 452
Query: 706 ARQLQQINALVE-------SAKLRILHAEEQMKACLTEALRYNSEDRHLAVNLETTKWEL 758
++ L + N L++ S + +I + +Q+ R N E R L N +TT ++
Sbjct: 453 SKNLSKSNELIQQLKDIEKSLQAKIENLNKQLHIS-----RIN-EKRLLDSN-KTTSLKI 505
Query: 759 ADAEKELKWLKSAVTSSDKEYEQIQRKTEDMRKELENERNERKKLEEELMEVNNKVAEL- 817
D +L + T +E ++ + M +L + E K L +L NK +L
Sbjct: 506 MDLTSQLSKANKSSTLVQQECNKLIEEKAKMESKLNDLEIETKNLATKLTYQENKSKKLH 565
Query: 818 ---TSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRH 874
S G+ L +E+++ + ++ C +C K+ VI C H+FC C + L R
Sbjct: 566 KTLVSNGGDNGA--LAEELENFRTVVYCSLCSKNWKDTVIKTCGHVFCADCCKERLAARM 623
Query: 875 RKCPGCGTAFGQSDVRFVKI 894
RKCP C F +D+ V +
Sbjct: 624 RKCPTCNKGFSSNDLLVVHL 643
>sp|Q7S304|BRE1_NEUCR E3 ubiquitin-protein ligase bre-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bre-1 PE=3 SV=1
Length = 707
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 842 CGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSDV 889
C VC K ++ C H+FCN C+ L R RKCP C AF +SD
Sbjct: 655 CSVCRSNFKNTILKGCGHVFCNECVDNRLANRMRKCPSCNKAFDRSDA 702
>sp|Q07457|BRE1_YEAST E3 ubiquitin-protein ligase BRE1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BRE1 PE=1 SV=1
Length = 700
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 802 KLEEELMEVNNKVAELTSETGEAAIQKLQDEIKDCKAILKCGVCFDRPKEVVITKCFHLF 861
KL + L NNK ++ + L +E+ + + ++ C +C K + I C H+F
Sbjct: 615 KLHDTLFRGNNK-------NKGSSDEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVF 667
Query: 862 CNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI 894
C C + L R RKCP C AF +D+ V +
Sbjct: 668 CENCCKERLAARMRKCPTCNKAFSSNDLLTVHL 700
>sp|Q6CWM4|BRE1_KLULA E3 ubiquitin-protein ligase BRE1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=BRE1 PE=3 SV=1
Length = 663
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 829 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSD 888
L +E+++ + I+ C +C K + C H+FC+ C + L R RKCP C F +D
Sbjct: 598 LAEELENFRTIIYCSLCSKNWKNTALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSND 657
Query: 889 V 889
+
Sbjct: 658 L 658
>sp|Q6FWF3|BRE1_CANGA E3 ubiquitin-protein ligase BRE1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=BRE1 PE=3 SV=1
Length = 693
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 829 LQDEIKDCKAILKCGVCFDRPKEVVITKCFHLFCNPCIQRNLEIRHRKCPGCGTAFGQSD 888
+ +E+++ + ++ C +C K + I C H+FC C + L R RKCP C F +D
Sbjct: 628 MAEELENFRTLVYCSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRKCPTCNKPFSSND 687
Query: 889 VRFVKI 894
+ V +
Sbjct: 688 LLMVHL 693
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,781,799
Number of Sequences: 539616
Number of extensions: 11558102
Number of successful extensions: 90061
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 3337
Number of HSP's that attempted gapping in prelim test: 68254
Number of HSP's gapped (non-prelim): 14677
length of query: 894
length of database: 191,569,459
effective HSP length: 127
effective length of query: 767
effective length of database: 123,038,227
effective search space: 94370320109
effective search space used: 94370320109
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)