Query 002679
Match_columns 893
No_of_seqs 555 out of 5726
Neff 10.2
Searched_HMMs 13730
Date Tue Mar 26 17:12:05 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002679.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1398-1402//hhsearch_scop/002679hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 0 0 290.3 15.2 291 32-357 2-301 (313)
2 d2omza2 c.10.2.1 (A:33-416) In 100.0 6.4E-40 4.6E-44 209.3 30.3 59 654-716 325-383 (384)
3 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.8E-42 0 220.9 15.7 242 532-777 70-313 (313)
4 d2omza2 c.10.2.1 (A:33-416) In 100.0 1.3E-38 9.2E-43 202.9 31.0 101 632-740 283-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 100.0 1.9E-35 1.4E-39 187.3 30.0 249 66-360 5-255 (305)
6 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 6.5E-37 4.7E-41 194.5 18.4 211 540-750 34-245 (284)
7 d1xkua_ c.10.2.7 (A:) Decorin 100.0 1.5E-34 1.1E-38 182.8 26.1 109 634-743 171-285 (305)
8 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 2.2E-34 1.6E-38 182.0 18.8 204 107-310 32-236 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 100.0 5.1E-33 3.7E-37 175.3 18.4 146 607-755 74-219 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 100.0 3.8E-30 2.8E-34 161.2 23.0 103 108-213 32-134 (266)
11 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 5.4E-31 4E-35 165.3 -4.3 60 684-743 371-439 (460)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 6.6E-23 4.8E-27 125.5 36.5 53 108-168 39-91 (353)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 3.3E-24 2.4E-28 131.9 29.8 12 133-144 40-51 (353)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 1.4E-31 1E-35 168.2 -8.5 95 632-726 338-446 (460)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.9 1.8E-24 1.3E-28 133.3 16.1 14 656-669 171-184 (227)
16 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 7.7E-25 5.6E-29 135.0 13.9 85 107-191 29-115 (242)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 1.4E-24 1E-28 133.7 14.4 36 132-167 30-65 (242)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.9 5E-24 3.6E-28 131.1 16.4 15 705-719 194-208 (227)
19 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 6E-25 4.4E-29 135.6 9.3 90 656-745 52-141 (192)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 1.3E-24 9.2E-29 134.0 9.7 88 607-694 51-138 (192)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.9 9.9E-22 7.2E-26 119.7 16.4 165 106-284 45-209 (210)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.9 1.8E-21 1.3E-25 118.5 16.8 175 114-304 25-199 (199)
23 d2astb2 c.10.1.3 (B:2136-2419) 99.9 1E-22 7.5E-27 124.6 4.7 12 704-715 223-234 (284)
24 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.8 4.3E-23 3.2E-27 126.4 0.9 91 654-744 211-316 (344)
25 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.8 1.2E-22 8.9E-27 124.2 0.6 90 632-721 213-317 (344)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.8 9.5E-20 6.9E-24 110.0 9.9 129 606-737 14-146 (162)
27 d2ifga3 c.10.2.7 (A:36-191) Hi 99.7 5.1E-18 3.7E-22 101.5 9.5 120 634-756 8-128 (156)
28 d1dcea3 c.10.2.2 (A:444-567) R 99.7 3.1E-17 2.3E-21 97.6 10.4 102 638-744 2-104 (124)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.7 6.6E-17 4.8E-21 96.0 10.8 41 678-718 61-102 (124)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.7 2.7E-19 2E-23 107.8 -1.7 112 629-745 43-155 (198)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.6 5.1E-18 3.7E-22 101.5 -0.9 128 604-736 42-180 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 99.6 1.3E-15 9.3E-20 89.7 9.5 86 632-718 29-115 (156)
33 d1koha1 c.10.2.3 (A:201-362) m 99.2 4.2E-12 3E-16 72.4 3.8 68 654-721 61-130 (162)
34 d1koha1 c.10.2.3 (A:201-362) m 99.1 4.6E-12 3.3E-16 72.2 1.3 69 677-745 60-130 (162)
35 d1pgva_ c.10.1.1 (A:) Tropomod 98.9 2.5E-09 1.8E-13 58.7 6.7 89 653-741 39-142 (167)
36 d1io0a_ c.10.1.1 (A:) Tropomod 98.4 9.1E-08 6.6E-12 51.0 4.4 91 653-743 41-145 (166)
37 d1io0a_ c.10.1.1 (A:) Tropomod 98.2 9.8E-08 7.1E-12 50.9 1.1 14 703-716 129-142 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=0 Score=290.33 Aligned_cols=291 Identities=32% Similarity=0.563 Sum_probs=166.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCCCEEECCC---CCEEEEECCCCCCCCC--CCCCCCC
Q ss_conf 6988889999999860799999999999988999999998--4471452899---9899998699998443--4876578
Q 002679 32 SDSTEEVHALLKWKTSLQNHDKGSLLPSWTLNNATKISPC--AWFGIHCNHV---GRVNSINLTNVGLKGT--LHDFSFS 104 (893)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~W~~~~~~~~~~c--~w~gv~c~~~---~~v~~l~l~~~~~~~~--~~~~~~~ 104 (893)
.|.++|++||++||+++.+ | ..+++|. .++||| .|.||+|+.. +||+.|+++++++.|. +| ..+.
T Consensus 2 ~c~~~e~~aLl~~k~~~~~-~--~~l~sW~----~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp-~~l~ 73 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGN-P--TTLSSWL----PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SSLA 73 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTC-C--GGGTTCC----TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GGGG
T ss_pred CCCHHHHHHHHHHHHHCCC-C--CCCCCCC----CCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCC-HHHH
T ss_conf 9898999999999997799-9--8677889----99999889488969748999479889989899888888798-4784
Q ss_pred CCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 999997998789-9777569724459999989858898799889822459999991017885579999787898999879
Q 002679 105 SFPHLAYLDLQV-NQIFGIIPPQIGNISKLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLSANQFSGRIPPQIGHLSYIEA 183 (893)
Q Consensus 105 ~l~~L~~L~L~~-n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~ 183 (893)
++++|++|+|++ |.+.+.+|..|+++++|++|++++|.+.+..+..+..+.+|++++++.|.+.+.+|..+++++.++.
T Consensus 74 ~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~ 153 (313)
T d1ogqa_ 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCE
T ss_conf 67533520202654333002431145420011020356434433222220111001111224555568512206740000
Q ss_pred EECCCCCCCCCCCCCCCCCCCC-CEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 9698865789898445799999-899845887999899898899998889910786888899244699999799845887
Q 002679 184 LHLFKNQLSGPIPHEVGGLSSL-NELALTSNFLKGSIPPSLGNLTNLAILYLHNNSLSGSIPSEIGNLKSLSSLALGNNK 262 (893)
Q Consensus 184 L~l~~~~~~~~~~~~~~~l~~L-~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 262 (893)
+++++|.+.+.+|..+..+..+ +.++++.|.+++..+..+..+.. ..+++..+.
T Consensus 154 l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-------------------------~~l~l~~~~ 208 (313)
T d1ogqa_ 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL-------------------------AFVDLSRNM 208 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC-------------------------SEEECCSSE
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------------------------CCCCCCCCC
T ss_conf 0023553356203121443112323102246435332433222222-------------------------233333343
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 99989876789998879994267778878745558888875206987477877888888999987983378875666898
Q 002679 263 LCGSIPLFLGNLTNLDTLYLRNNSFSSSIPSEIGNLKSLSILELGENRLNGSIPLSLGNLTNLDTLYLYTNSLSGSIPSE 342 (893)
Q Consensus 263 ~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 342 (893)
..+.+|..+..++.++.++++++.+.+..+ .+..+++|+.|++++|++++.+|..++++++|++|++++|.++|.+|.
T Consensus 209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~- 286 (313)
T d1ogqa_ 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCC-
T ss_conf 322222222222221112222222222222-222455444444765706660876884799999897958835166898-
Q ss_pred CCCCCCCCEEECCCC
Q ss_conf 889999986974478
Q 002679 343 IGNLKSLSGLELADN 357 (893)
Q Consensus 343 l~~l~~L~~L~l~~n 357 (893)
+..+++|+.+++++|
T Consensus 287 ~~~L~~L~~l~l~~N 301 (313)
T d1ogqa_ 287 GGNLQRFDVSAYANN 301 (313)
T ss_dssp STTGGGSCGGGTCSS
T ss_pred CCCCCCCCHHHHCCC
T ss_conf 666799897886889
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=100.00 E-value=6.4e-40 Score=209.28 Aligned_cols=59 Identities=24% Similarity=0.400 Sum_probs=19.9
Q ss_pred CCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 248887984416468587565066540367651124433378740000258744661218888
Q 002679 654 LGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEMLNLSHN 716 (893)
Q Consensus 654 l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 716 (893)
+..+++|+.|++++|+++.. + .+..+++|+.|++++|++++..| +.++++|+.|+|++|
T Consensus 325 l~~l~~L~~L~L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 325 VSSLTKLQRLFFANNKVSDV-S-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp GGGCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCCCCEEECCCCCCCCC-H-HHCCCCCCCEEECCCCCCCCCHH--HCCCCCCCEEECCCC
T ss_conf 36689889898989989997-4-67089999989897995899800--003999999639789
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=2.8e-42 Score=220.92 Aligned_cols=242 Identities=25% Similarity=0.453 Sum_probs=155.9
Q ss_pred CCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 3224899986994458-705455885768899964898657866799997868999864998568820112884104765
Q 002679 532 ESFGIHPKLTFIDLSH-NNFYGQISSDWGKCPNLGTFDVSVNNIIGSLPPEIGDSSQLHVIDLSANHIIGKIPSEIGKLS 610 (893)
Q Consensus 532 ~~~~~~~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~ 610 (893)
..+..+++|++|++++ |.+.+.+|..+..+++|++|++++|++.+..+..+..+..|+.++++.|.+.+.+|..+..++
T Consensus 70 ~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~ 149 (313)
T d1ogqa_ 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP 149 (313)
T ss_dssp GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 47846753352020265433300243114542001102035643443322222011100111122455556851220674
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 33268702664567786012588666-54107777456553221248887984416468587565066540367651124
Q 002679 611 SLIKLILRRNQLFGQLPSELGSLIQL-EYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDL 689 (893)
Q Consensus 611 ~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 689 (893)
.++.+++++|.+.+.+|..+..+..+ +.+++++|.+.+..+..+..+..+ .++++++...+.+|..+..+++++.+++
T Consensus 150 ~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~ 228 (313)
T d1ogqa_ 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHL 228 (313)
T ss_dssp TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEEC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 000000235533562031214431123231022464353324332222222-3333334332222222222222111222
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 43337874000025874466121888868987721111299997897327823003899921353204331379899889
Q 002679 690 SHNFLGKEIPSQICNMRSLEMLNLSHNNLSDFIPRCFEEMNGLLYIDISYNELHGPIPNSTAFSDALMEALQGNEGLCGD 769 (893)
Q Consensus 690 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~lc~~ 769 (893)
++|.+.+.++ .+..+++|+.|++++|++++.+|..+..++.|+.+++++|.++|.+|..+.+.......+.||+.+||.
T Consensus 229 ~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 229 AKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
T ss_conf 2222222222-222455444444765706660876884799999897958835166898666799897886889500198
Q ss_pred CCCCCCCC
Q ss_conf 98988989
Q 002679 770 IKGFQSCK 777 (893)
Q Consensus 770 ~~~~~~C~ 777 (893)
| .+.|+
T Consensus 308 p--lp~c~ 313 (313)
T d1ogqa_ 308 P--LPACT 313 (313)
T ss_dssp T--SSCCC
T ss_pred C--CCCCC
T ss_conf 9--88989
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=100.00 E-value=1.3e-38 Score=202.90 Aligned_cols=101 Identities=25% Similarity=0.444 Sum_probs=49.2
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 88666541077774565532212488879844164685875650665403676511244333787400002587446612
Q 002679 632 SLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEML 711 (893)
Q Consensus 632 ~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 711 (893)
.++.++.+.++.|.+.+. ..+..+++++.|++++|++.+..+ +..+++|+.|++++|++++. + .+..+++|++|
T Consensus 283 ~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~l-~-~l~~l~~L~~L 356 (384)
T d2omza2 283 GLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV-S-SLANLTNINWL 356 (384)
T ss_dssp TCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-G-GGGGCTTCCEE
T ss_pred CCCCCCCCCCCCCCCCCC--CCCCHHCCCCEEECCCCCCCCCCC--CCCCCCCCEEECCCCCCCCC-H-HHCCCCCCCEE
T ss_conf 565222233232333332--210000246767777887789845--36689889898989989997-4-67089999989
Q ss_pred ECCCCCCCCCCCHHHHCCCCCCEEECCCC
Q ss_conf 18888689877211112999978973278
Q 002679 712 NLSHNNLSDFIPRCFEEMNGLLYIDISYN 740 (893)
Q Consensus 712 ~Ls~N~l~~~~~~~l~~l~~L~~l~ls~N 740 (893)
++++|++++..| +..+++|+.+++++|
T Consensus 357 ~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 357 SAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp ECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred ECCCCCCCCCHH--HCCCCCCCEEECCCC
T ss_conf 897995899800--003999999639789
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.9e-35 Score=187.27 Aligned_cols=249 Identities=26% Similarity=0.347 Sum_probs=129.9
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 99999844714528999899998699998443487657899999799878997775697244599999898588987998
Q 002679 66 TKISPCAWFGIHCNHVGRVNSINLTNVGLKGTLHDFSFSSFPHLAYLDLQVNQIFGIIPPQIGNISKLKYLDLSSNSFSG 145 (893)
Q Consensus 66 ~~~~~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~ 145 (893)
++..-|.|.++.|+..+ +. .+| ..+ .+.+++|+|++|.++...+.+|.++++|++|++++|.+..
T Consensus 5 p~~c~c~~~~~~C~~~~-----------L~-~lP-~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~ 69 (305)
T d1xkua_ 5 PFRCQCHLRVVQCSDLG-----------LE-KVP-KDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69 (305)
T ss_dssp CTTCEEETTEEECTTSC-----------CC-SCC-CSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCEECCCEEEECCCC-----------CC-CCC-CCC--CCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99889559999855999-----------88-519-888--9997989784991898696576046565231123443445
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC--CCCCCCC
Q ss_conf 89822459999991017885579999787898999879969886578989844579999989984588799--9899898
Q 002679 146 TIPPQIGNLSMLKFLYLSANQFSGRIPPQIGHLSYIEALHLFKNQLSGPIPHEVGGLSSLNELALTSNFLK--GSIPPSL 223 (893)
Q Consensus 146 ~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~--~~~~~~l 223 (893)
..|..|.++++|++|++++|.+. .+|..+ ...++.|++..+.+....+..+.....+..+....+... ...+..+
T Consensus 70 i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 146 (305)
T d1xkua_ 70 ISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146 (305)
T ss_dssp BCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG
T ss_pred CCHHHHHCCCCCCEECCCCCCCC-CCCCCH--HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23566527985578315687567-676400--111323210246102344445401331100001233333467776422
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCE
Q ss_conf 89999888991078688889924469999979984588799989876789998879994267778878745558888875
Q 002679 224 GNLTNLAILYLHNNSLSGSIPSEIGNLKSLSSLALGNNKLCGSIPLFLGNLTNLDTLYLRNNSFSSSIPSEIGNLKSLSI 303 (893)
Q Consensus 224 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 303 (893)
..+++| +.+++++|.+. .++.. .+++|+.|++++|......+..+..++.++.
T Consensus 147 ~~l~~L------------------------~~l~l~~n~l~-~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~ 199 (305)
T d1xkua_ 147 QGMKKL------------------------SYIRIADTNIT-TIPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAK 199 (305)
T ss_dssp GGCTTC------------------------CEEECCSSCCC-SCCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred CCCCCC------------------------CCCCCCCCCCC-CCCCC--CCCCCCEEECCCCCCCCCCHHHHHCCCCCCC
T ss_conf 345656------------------------71203467745-16710--1776678989788677888267641341330
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 206987477877888888999987983378875666898889999986974478678
Q 002679 304 LELGENRLNGSIPLSLGNLTNLDTLYLYTNSLSGSIPSEIGNLKSLSGLELADNELS 360 (893)
Q Consensus 304 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~ 360 (893)
|++++|.+.+..+..+.++++|++|++++|.++ .+|..+..+++|+.|++++|+++
T Consensus 200 L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 200 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC
T ss_conf 154455332223454334433224302554002-46311033467898989898657
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.5e-37 Score=194.48 Aligned_cols=211 Identities=22% Similarity=0.205 Sum_probs=144.5
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC-CCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 8699445870545588576889996489865786679999786899986499856-882011288410476533268702
Q 002679 540 LTFIDLSHNNFYGQISSDWGKCPNLGTFDVSVNNIIGSLPPEIGDSSQLHVIDLS-ANHIIGKIPSEIGKLSSLIKLILR 618 (893)
Q Consensus 540 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~-~n~l~~~~~~~l~~l~~L~~L~Ls 618 (893)
+++|++++|.++...+..|..+++|+++++++|.+....+..+...+.++.+... .+.+....+..+.++++|+.|+++
T Consensus 34 ~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~ 113 (284)
T d1ozna_ 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD 113 (284)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECT
T ss_pred CCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECC
T ss_conf 88897748817987977864142130000134454332111212222222222221022354462010101027787568
Q ss_pred CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 66456778601258866654107777456553221248887984416468587565066540367651124433378740
Q 002679 619 RNQLFGQLPSELGSLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEI 698 (893)
Q Consensus 619 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 698 (893)
+|.+....+..+....+|+.+++++|.++++.+..|..+++|+.|++++|++.+..+..+..+++|+.+++++|.+++..
T Consensus 114 ~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~ 193 (284)
T d1ozna_ 114 RCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193 (284)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCC
T ss_conf 85443201353320001211020014314458057404340502231417656625666546563413142114346628
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 0002587446612188886898772111129999789732782300389992
Q 002679 699 PSQICNMRSLEMLNLSHNNLSDFIPRCFEEMNGLLYIDISYNELHGPIPNST 750 (893)
Q Consensus 699 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~ls~N~l~~~~~~~~ 750 (893)
|..|..+++|++|++++|++.+..+..|..+.+|+++++++|++.|+|+..+
T Consensus 194 ~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~~~ 245 (284)
T d1ozna_ 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARP 245 (284)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH
T ss_conf 1676653200023333352210000023554656889811998878756469
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.5e-34 Score=182.81 Aligned_cols=109 Identities=25% Similarity=0.286 Sum_probs=45.3
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 66654107777456553221248887984416468587565066540367651124433378740000258744661218
Q 002679 634 IQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEMLNL 713 (893)
Q Consensus 634 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 713 (893)
++|+.|++++|......+..+..++.++.|++++|.+.+..+..+..+++|++|+|++|.++ .+|..+..+++|++|++
T Consensus 171 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~L 249 (305)
T d1xkua_ 171 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 249 (305)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEEC
T ss_conf 76678989788677888267641341330154455332223454334433224302554002-46311033467898989
Q ss_pred CCCCCCCCCCHHH------HCCCCCCEEECCCCCCC
Q ss_conf 8886898772111------12999978973278230
Q 002679 714 SHNNLSDFIPRCF------EEMNGLLYIDISYNELH 743 (893)
Q Consensus 714 s~N~l~~~~~~~l------~~l~~L~~l~ls~N~l~ 743 (893)
++|+++.+....| .....|+.+++++||+.
T Consensus 250 s~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 250 HNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCCCCCCCHHHCCCCCHHCCCCCCCEEECCCCCCC
T ss_conf 898657638100267210021588897889899576
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.2e-34 Score=181.99 Aligned_cols=204 Identities=27% Similarity=0.311 Sum_probs=92.6
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCC-CCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 999799878997775697244599999898588987998898224599999910178-8557999978789899987996
Q 002679 107 PHLAYLDLQVNQIFGIIPPQIGNISKLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLS-ANQFSGRIPPQIGHLSYIEALH 185 (893)
Q Consensus 107 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~-~n~~~~~~p~~l~~l~~L~~L~ 185 (893)
+.+++|+|++|.++.+.+.+|.++++|++|+++++.+....+..+.++..++.+... .+.+....+..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEE
T ss_conf 99888977488179879778641421300001344543321112122222222222210223544620101010277875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 98865789898445799999899845887999899898899998889910786888899244699999799845887999
Q 002679 186 LFKNQLSGPIPHEVGGLSSLNELALTSNFLKGSIPPSLGNLTNLAILYLHNNSLSGSIPSEIGNLKSLSSLALGNNKLCG 265 (893)
Q Consensus 186 l~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 265 (893)
+++|.+....+..+..+.+|+.+++++|.++...+..|..+++|+.|++++|.+....+..+.++++|+.+++++|.+.+
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCC
T ss_conf 68854432013533200012110200143144580574043405022314176566256665465634131421143466
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 898767899988799942677788787455588888752069874
Q 002679 266 SIPLFLGNLTNLDTLYLRNNSFSSSIPSEIGNLKSLSILELGENR 310 (893)
Q Consensus 266 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 310 (893)
..|..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 281676653200023333352210000023554656889811998
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.1e-33 Score=175.31 Aligned_cols=146 Identities=29% Similarity=0.231 Sum_probs=108.9
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCC
Q ss_conf 47653326870266456778601258866654107777456553221248887984416468587565066540367651
Q 002679 607 GKLSSLIKLILRRNQLFGQLPSELGSLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSE 686 (893)
Q Consensus 607 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 686 (893)
..+++|+.|++++|++.. .+..+..+++|+.|++++|.+....+..+..+.+++.|++++|.+....+..+..++.|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~ 152 (266)
T d1p9ag_ 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (266)
T ss_dssp SCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHH
T ss_conf 112232111112222211-1112122222222222223110110011222211112212434210221233322111000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 124433378740000258744661218888689877211112999978973278230038999213532
Q 002679 687 LDLSHNFLGKEIPSQICNMRSLEMLNLSHNNLSDFIPRCFEEMNGLLYIDISYNELHGPIPNSTAFSDA 755 (893)
Q Consensus 687 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~ls~N~l~~~~~~~~~~~~~ 755 (893)
+++++|++++..+..|..+++|++|+|++|+++ .+|..+..+..|+.+++++|||.|+|...+ |..|
T Consensus 153 l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC~~~~-l~~w 219 (266)
T d1p9ag_ 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEILY-FRRW 219 (266)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGGHH-HHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEEECCCCCCCCCCHHH-HHHH
T ss_conf 000015652237200134212423430139785-568667778889999836999878864379-9999
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.98 E-value=3.8e-30 Score=161.15 Aligned_cols=103 Identities=25% Similarity=0.310 Sum_probs=38.8
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 99799878997775697244599999898588987998898224599999910178855799997878989998799698
Q 002679 108 HLAYLDLQVNQIFGIIPPQIGNISKLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLSANQFSGRIPPQIGHLSYIEALHLF 187 (893)
Q Consensus 108 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~ 187 (893)
++++|+|++|.+.+..+.+|.++++|++|+|++|.++ .++ .++.+++|++|++++|.+. ..+..+.++++|+.|+++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC
T ss_conf 8898988499289859778634565522135665444-431-1111223211111222221-111121222222222222
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 86578989844579999989984588
Q 002679 188 KNQLSGPIPHEVGGLSSLNELALTSN 213 (893)
Q Consensus 188 ~~~~~~~~~~~~~~l~~L~~L~l~~n 213 (893)
++.+....+..+..+.++++|++++|
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n 134 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGN 134 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 23110110011222211112212434
No 11
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=5.4e-31 Score=165.32 Aligned_cols=60 Identities=20% Similarity=0.030 Sum_probs=21.8
Q ss_pred CCCCCCCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCCCCHHH----H-CCCCCCEEECCCCCCC
Q ss_conf 65112443337874----00002587446612188886898772111----1-2999978973278230
Q 002679 684 LSELDLSHNFLGKE----IPSQICNMRSLEMLNLSHNNLSDFIPRCF----E-EMNGLLYIDISYNELH 743 (893)
Q Consensus 684 L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l----~-~l~~L~~l~ls~N~l~ 743 (893)
|+.|+|++|.++.. +++.+..+++|++|||++|+++......+ . +...|+.+++.+|.+.
T Consensus 371 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred CCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC
T ss_conf 788989799797599999999996299889898999969879999999999747886678989898789
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.95 E-value=6.6e-23 Score=125.53 Aligned_cols=53 Identities=25% Similarity=0.286 Sum_probs=22.3
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 9979987899777569724459999989858898799889822459999991017885579
Q 002679 108 HLAYLDLQVNQIFGIIPPQIGNISKLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLSANQFS 168 (893)
Q Consensus 108 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~~n~~~ 168 (893)
++++|||+++.++. +|+. .++|++|++++|.++ .+|..+ .+|+.|++++|.+.
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~ 91 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK 91 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS
T ss_pred CCCEEEECCCCCCC-CCCC---CCCCCEEECCCCCCC-CCCCCH---HHHHHHHHHHCCCC
T ss_conf 99899937999887-8898---789888989999796-336203---32033266551432
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.95 E-value=3.3e-24 Score=131.93 Aligned_cols=12 Identities=25% Similarity=0.301 Sum_probs=4.5
Q ss_pred CCEEECCCCCCC
Q ss_conf 989858898799
Q 002679 133 LKYLDLSSNSFS 144 (893)
Q Consensus 133 L~~L~Ls~n~~~ 144 (893)
+++|||+++.++
T Consensus 40 l~~LdLs~~~L~ 51 (353)
T d1jl5a_ 40 AHELELNNLGLS 51 (353)
T ss_dssp CSEEECTTSCCS
T ss_pred CCEEEECCCCCC
T ss_conf 989993799988
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.4e-31 Score=168.21 Aligned_cols=95 Identities=28% Similarity=0.208 Sum_probs=48.7
Q ss_pred CCCCCCEECCCCCCCCCC----CCCCCC-CCCCCCEEECCCCCCCCC----CCHHHHHCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 886665410777745655----322124-888798441646858756----5066540367651124433378740000-
Q 002679 632 SLIQLEYLDLSSNRLSNS----IPRSLG-NLVKLHYLNLSTNQFIQE----IPIKLEKLIHLSELDLSHNFLGKEIPSQ- 701 (893)
Q Consensus 632 ~l~~L~~L~Ls~n~l~~~----~~~~l~-~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~- 701 (893)
..++|++|+|++|.+.+. ++..+. ..+.|+.|+|++|.++.. +...+...++|++|+|++|.++......
T Consensus 338 ~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l 417 (460)
T d1z7xw1 338 QNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417 (460)
T ss_dssp HCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHH
T ss_pred CCCCHHHHHEEEECCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHH
T ss_conf 10111132012101357664001112204567778898979979759999999999629988989899996987999999
Q ss_pred ---CC-CCCCCCEEECCCCCCCCCCCHHH
Q ss_conf ---25-87446612188886898772111
Q 002679 702 ---IC-NMRSLEMLNLSHNNLSDFIPRCF 726 (893)
Q Consensus 702 ---~~-~l~~L~~L~Ls~N~l~~~~~~~l 726 (893)
+. +...|+.|++.+|.+.......+
T Consensus 418 ~~~l~~~~~~L~~l~l~~~~~~~~~~~~l 446 (460)
T d1z7xw1 418 VESVRQPGCLLEQLVLYDIYWSEEMEDRL 446 (460)
T ss_dssp HHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred HHHHHHCCCCCCEEECCCCCCCHHHHHHH
T ss_conf 99997478866789898987898999999
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=1.8e-24 Score=133.29 Aligned_cols=14 Identities=43% Similarity=0.506 Sum_probs=4.7
Q ss_pred CCCCCCEEECCCCC
Q ss_conf 88879844164685
Q 002679 656 NLVKLHYLNLSTNQ 669 (893)
Q Consensus 656 ~l~~L~~L~Ls~N~ 669 (893)
++++|+.|++++|+
T Consensus 171 ~l~~L~~L~Ls~n~ 184 (227)
T d1h6ua2 171 NLSKLTTLKADDNK 184 (227)
T ss_dssp TCTTCCEEECCSSC
T ss_pred CCCCCEECCCCCCC
T ss_conf 64633564458884
No 16
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=7.7e-25 Score=135.05 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=40.9
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCEECCCC-CCCCCCCCCCCCCCCCCCEE
Q ss_conf 99979987899777569724459999989858898799889-82245999999101788-55799997878989998799
Q 002679 107 PHLAYLDLQVNQIFGIIPPQIGNISKLKYLDLSSNSFSGTI-PPQIGNLSMLKFLYLSA-NQFSGRIPPQIGHLSYIEAL 184 (893)
Q Consensus 107 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~-p~~l~~l~~L~~L~L~~-n~~~~~~p~~l~~l~~L~~L 184 (893)
+++++|++++|.+....+.+|.++++|++|++++|.+...+ +..|.++++++++.+.. +.+....+..+.++++|+++
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98899987699189649668614643232110221124201001122222222211111234322222212222222222
Q ss_pred ECCCCCC
Q ss_conf 6988657
Q 002679 185 HLFKNQL 191 (893)
Q Consensus 185 ~l~~~~~ 191 (893)
+++++.+
T Consensus 109 ~l~~~~l 115 (242)
T d1xwdc1 109 LISNTGI 115 (242)
T ss_dssp EEESCCC
T ss_pred CCCHHHH
T ss_conf 3421111
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.4e-24 Score=133.72 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=13.7
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 998985889879988982245999999101788557
Q 002679 132 KLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLSANQF 167 (893)
Q Consensus 132 ~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~~n~~ 167 (893)
++++|++++|.+....+..|.++++|++|++++|.+
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~ 65 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTT
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCC
T ss_conf 889998769918964966861464323211022112
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=5e-24 Score=131.06 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=4.8
Q ss_pred CCCCCEEECCCCCCC
Q ss_conf 744661218888689
Q 002679 705 MRSLEMLNLSHNNLS 719 (893)
Q Consensus 705 l~~L~~L~Ls~N~l~ 719 (893)
+++|+.|++++|+++
T Consensus 194 l~~L~~L~Ls~N~lt 208 (227)
T d1h6ua2 194 LPNLIEVHLKNNQIS 208 (227)
T ss_dssp CTTCCEEECTTSCCC
T ss_pred CCCCCEEECCCCCCC
T ss_conf 999998979599689
No 19
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.91 E-value=6e-25 Score=135.59 Aligned_cols=90 Identities=28% Similarity=0.379 Sum_probs=28.9
Q ss_pred CCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEE
Q ss_conf 88879844164685875650665403676511244333787400002587446612188886898772111129999789
Q 002679 656 NLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEMLNLSHNNLSDFIPRCFEEMNGLLYI 735 (893)
Q Consensus 656 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l 735 (893)
++++|+.|+|++|.+....+..+..+++|+.|+|++|++..+.+..|.++++|+.|+|++|+++++.+..|..++.|+.+
T Consensus 52 ~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l 131 (192)
T d1w8aa_ 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp GCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
T ss_conf 87627213013632212121222112222101003553443497998079746552457745353597785687533420
Q ss_pred ECCCCCCCCC
Q ss_conf 7327823003
Q 002679 736 DISYNELHGP 745 (893)
Q Consensus 736 ~ls~N~l~~~ 745 (893)
++++|++.|.
T Consensus 132 ~L~~N~~~~~ 141 (192)
T d1w8aa_ 132 NLASNPFNCN 141 (192)
T ss_dssp ECTTCCBCCS
T ss_pred CCCCCCCCCC
T ss_conf 0036443435
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.91 E-value=1.3e-24 Score=133.99 Aligned_cols=88 Identities=33% Similarity=0.458 Sum_probs=32.4
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCC
Q ss_conf 47653326870266456778601258866654107777456553221248887984416468587565066540367651
Q 002679 607 GKLSSLIKLILRRNQLFGQLPSELGSLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSE 686 (893)
Q Consensus 607 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 686 (893)
.++++|+.|++++|.+....+..|..+++|++|++++|++....+..|.++++|+.|+|++|+++...+..|..+++|++
T Consensus 51 ~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~ 130 (192)
T d1w8aa_ 51 GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTS 130 (192)
T ss_dssp GGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCE
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
T ss_conf 78762721301363221212122211222210100355344349799807974655245774535359778568753342
Q ss_pred CCCCCCCC
Q ss_conf 12443337
Q 002679 687 LDLSHNFL 694 (893)
Q Consensus 687 L~Ls~N~l 694 (893)
|+|++|.+
T Consensus 131 l~L~~N~~ 138 (192)
T d1w8aa_ 131 LNLASNPF 138 (192)
T ss_dssp EECTTCCB
T ss_pred CCCCCCCC
T ss_conf 00036443
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.88 E-value=9.9e-22 Score=119.74 Aligned_cols=165 Identities=26% Similarity=0.378 Sum_probs=0.0
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99997998789977756972445999998985889879988982245999999101788557999978789899987996
Q 002679 106 FPHLAYLDLQVNQIFGIIPPQIGNISKLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLSANQFSGRIPPQIGHLSYIEALH 185 (893)
Q Consensus 106 l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~ 185 (893)
+..|++|+++++.+....+ +..+++|++|++++|.+++..+ ++.+++|++|++++|.++ .+| .+.++++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l~~--l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEE
T ss_pred HCCCCEEECCCCCCCCCHH--HHHCCCCCEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCC
T ss_conf 5484589782798887444--7648998987698960258601--135862120143333321-222-121222111223
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 98865789898445799999899845887999899898899998889910786888899244699999799845887999
Q 002679 186 LFKNQLSGPIPHEVGGLSSLNELALTSNFLKGSIPPSLGNLTNLAILYLHNNSLSGSIPSEIGNLKSLSSLALGNNKLCG 265 (893)
Q Consensus 186 l~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 265 (893)
++++.+.. ...+.+++.++.++++.|.+++ ...+..+++|+.+++++|.+.+..+ +.++++|+.|++++|.++
T Consensus 119 l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~~--l~~l~~L~~L~Ls~N~i~- 191 (210)
T d1h6ta2 119 LEHNGISD--INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS- 191 (210)
T ss_dssp CTTSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-
T ss_pred CCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCEEECCCCCCC-
T ss_conf 45653221--1220111112221122233345--4310001332100134643025645--367898999989799899-
Q ss_pred CCCCCCCCCCCCCEEEEEC
Q ss_conf 8987678999887999426
Q 002679 266 SIPLFLGNLTNLDTLYLRN 284 (893)
Q Consensus 266 ~~~~~l~~l~~L~~L~L~~ 284 (893)
.++ .+..+++|+.|++++
T Consensus 192 ~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp BCG-GGTTCTTCSEEEEEE
T ss_pred CCH-HHCCCCCCCEEECCC
T ss_conf 872-116999989997118
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.88 E-value=1.8e-21 Score=118.47 Aligned_cols=175 Identities=27% Similarity=0.386 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 78997775697244599999898588987998898224599999910178855799997878989998799698865789
Q 002679 114 LQVNQIFGIIPPQIGNISKLKYLDLSSNSFSGTIPPQIGNLSMLKFLYLSANQFSGRIPPQIGHLSYIEALHLFKNQLSG 193 (893)
Q Consensus 114 L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~ 193 (893)
+..+.+.+..... .+.++++|+++++.+... ..+..+++|++|++++|.+++..| ++++++|+.|+++.|.+..
T Consensus 25 l~~~~~~~~~~~~--~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~ 98 (199)
T d2omxa2 25 LGKTNVTDTVSQT--DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD 98 (199)
T ss_dssp TTCSSTTSEECHH--HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred HCCCCCCCCCCHH--HHCCCCEEECCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC
T ss_conf 6778778855987--946878998999999775--202137886757545655667640--1677522311112222222
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 89844579999989984588799989989889999888991078688889924469999979984588799989876789
Q 002679 194 PIPHEVGGLSSLNELALTSNFLKGSIPPSLGNLTNLAILYLHNNSLSGSIPSEIGNLKSLSSLALGNNKLCGSIPLFLGN 273 (893)
Q Consensus 194 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~ 273 (893)
..+ +.+++.|+.++++++......+ +..+++|+.+++++|.+... +.+..+++++.|++.+|.+++..+ +..
T Consensus 99 ~~~--l~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~~l~~--l~~ 170 (199)
T d2omxa2 99 ITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LAN 170 (199)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCCGG--GTT
T ss_pred CCC--CCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CCC
T ss_conf 211--1112232221112222223210--00122367764311110023--433321111112234555567701--167
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCEE
Q ss_conf 9988799942677788787455588888752
Q 002679 274 LTNLDTLYLRNNSFSSSIPSEIGNLKSLSIL 304 (893)
Q Consensus 274 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 304 (893)
+++|+.|++++|++++. +.++.+++|+.|
T Consensus 171 l~~L~~L~ls~N~i~~i--~~l~~L~~L~~L 199 (199)
T d2omxa2 171 LTTLERLDISSNKVSDI--SVLAKLTNLESL 199 (199)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred CCCCCEEECCCCCCCCC--CCCCCCCCCCCC
T ss_conf 99899997879979988--101278998949
No 23
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1e-22 Score=124.57 Aligned_cols=12 Identities=17% Similarity=0.304 Sum_probs=4.1
Q ss_pred CCCCCCEEECCC
Q ss_conf 874466121888
Q 002679 704 NMRSLEMLNLSH 715 (893)
Q Consensus 704 ~l~~L~~L~Ls~ 715 (893)
.+++|+.|++++
T Consensus 223 ~~~~L~~L~l~~ 234 (284)
T d2astb2 223 EIPTLKTLQVFG 234 (284)
T ss_dssp GCTTCCEEECTT
T ss_pred CCCCCCEEEEEC
T ss_conf 699989896448
No 24
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.85 E-value=4.3e-23 Score=126.43 Aligned_cols=91 Identities=23% Similarity=0.333 Sum_probs=40.7
Q ss_pred CCCCCCCCEEECCCCCCCCC----CCHHHHHCCCCCCCCCCCCCCCCCCCC----CCC--CCCCCCEEECCCCCCCCCC-
Q ss_conf 24888798441646858756----506654036765112443337874000----025--8744661218888689877-
Q 002679 654 LGNLVKLHYLNLSTNQFIQE----IPIKLEKLIHLSELDLSHNFLGKEIPS----QIC--NMRSLEMLNLSHNNLSDFI- 722 (893)
Q Consensus 654 l~~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~----~~~--~l~~L~~L~Ls~N~l~~~~- 722 (893)
+..+++|+.|++++|.+... +...+...+.|++|+|++|.+.+.... .+. ..+.|+.|++++|.+....
T Consensus 211 l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~ 290 (344)
T d2ca6a1 211 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 290 (344)
T ss_dssp GGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred HCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHH
T ss_conf 21101211222333322222222344433232211110300475671566788877631568888989898986980899
Q ss_pred ---CHHHH-CCCCCCEEECCCCCCCC
Q ss_conf ---21111-29999789732782300
Q 002679 723 ---PRCFE-EMNGLLYIDISYNELHG 744 (893)
Q Consensus 723 ---~~~l~-~l~~L~~l~ls~N~l~~ 744 (893)
...+. .++.|+.+++++|.+..
T Consensus 291 ~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 291 RTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHHHHHCCCCCCCEEECCCCCCCC
T ss_conf 99999997038999989787980898
No 25
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.83 E-value=1.2e-22 Score=124.22 Aligned_cols=90 Identities=24% Similarity=0.260 Sum_probs=37.3
Q ss_pred CCCCCCEECCCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCCCCHHH----HH--CCCCCCCCCCCCCCCCC----
Q ss_conf 886665410777745655----32212488879844164685875650665----40--36765112443337874----
Q 002679 632 SLIQLEYLDLSSNRLSNS----IPRSLGNLVKLHYLNLSTNQFIQEIPIKL----EK--LIHLSELDLSHNFLGKE---- 697 (893)
Q Consensus 632 ~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l----~~--l~~L~~L~Ls~N~l~~~---- 697 (893)
..+.|+.|++++|.+... +...+..+++|+.|++++|.+.......+ .. ...|++|++++|.+...
T Consensus 213 ~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~ 292 (344)
T d2ca6a1 213 YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 292 (344)
T ss_dssp GCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHH
T ss_pred CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHH
T ss_conf 10121122233332222222234443323221111030047567156678887763156888898989898698089999
Q ss_pred CCCCCC-CCCCCCEEECCCCCCCCC
Q ss_conf 000025-874466121888868987
Q 002679 698 IPSQIC-NMRSLEMLNLSHNNLSDF 721 (893)
Q Consensus 698 ~~~~~~-~l~~L~~L~Ls~N~l~~~ 721 (893)
+...+. ..++|+.|++++|.+...
T Consensus 293 l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 293 LKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHCCCCCCCEEECCCCCCCCC
T ss_conf 9999970389999897879808986
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=9.5e-20 Score=109.99 Aligned_cols=129 Identities=19% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCC
Q ss_conf 04765332687026645677860125886665410777745655322124888798441646858756506654036765
Q 002679 606 IGKLSSLIKLILRRNQLFGQLPSELGSLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLS 685 (893)
Q Consensus 606 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 685 (893)
+.++..+++|++++|.++.. +..+..+++|+.|++++|.+... ..+..+++|+.|++++|.+....+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16857484897889978865-76200414599898979978764--7744576130643102134577763223345344
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCC---CHHHHCCCCCCEEEC
Q ss_conf 11244333787400-00258744661218888689877---211112999978973
Q 002679 686 ELDLSHNFLGKEIP-SQICNMRSLEMLNLSHNNLSDFI---PRCFEEMNGLLYIDI 737 (893)
Q Consensus 686 ~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~---~~~l~~l~~L~~l~l 737 (893)
.|++++|.+..... ..+..+++|+.|++++|+++... +..+..++.|+.+|-
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEECC
T ss_conf 34203000166542110013653206640799634561069999987899583379
No 27
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.1e-18 Score=101.48 Aligned_cols=120 Identities=19% Similarity=0.080 Sum_probs=93.5
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCC-CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 666541077774565532212488879844164685-8756506654036765112443337874000025874466121
Q 002679 634 IQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQ-FIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEMLN 712 (893)
Q Consensus 634 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 712 (893)
...+.++.+++.+. ..|..+..+++|+.|++++|+ +..+.+..|.++++|+.|+|++|+++.+.+..|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCEEEECCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 99996985289976-58600257656574316898664436921225666667216202124774201112455433332
Q ss_pred CCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 88886898772111129999789732782300389992135320
Q 002679 713 LSHNNLSDFIPRCFEEMNGLLYIDISYNELHGPIPNSTAFSDAL 756 (893)
Q Consensus 713 Ls~N~l~~~~~~~l~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~ 756 (893)
|++|+++.+.+..+... .+..+++++|||.|+|...+ +..|.
T Consensus 87 Ls~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C~C~~~~-l~~~~ 128 (156)
T d2ifga3 87 LSFNALESLSWKTVQGL-SLQELVLSGNPLHCSCALRW-LQRWE 128 (156)
T ss_dssp CCSSCCSCCCSTTTCSC-CCCEEECCSSCCCCCGGGHH-HHHHH
T ss_pred CCCCCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCHHHH-HHHHH
T ss_conf 26787851574563353-21243357986338811799-99999
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.71 E-value=3.1e-17 Score=97.60 Aligned_cols=102 Identities=25% Similarity=0.281 Sum_probs=50.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 41077774565532212488879844164685875650665403676511244333787400002587446612188886
Q 002679 638 YLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEMLNLSHNN 717 (893)
Q Consensus 638 ~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 717 (893)
.|++++|.++.. + .++.++.|+.|++++|.+.+ +|..++.+++|+.|++++|.++.. + .+..+++|+.|++++|+
T Consensus 2 ~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~~-lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSC
T ss_pred EEECCCCCCCCC-C-CCCCCCCCCEEECCCCCCCC-CHHHHHHHHCCCCCCCCCCCCCCC-C-CCCCCCCCCEEECCCCC
T ss_conf 898689989887-1-01058988989797871686-521565543135453243211235-7-41233555768888986
Q ss_pred CCCCC-CHHHHCCCCCCEEECCCCCCCC
Q ss_conf 89877-2111129999789732782300
Q 002679 718 LSDFI-PRCFEEMNGLLYIDISYNELHG 744 (893)
Q Consensus 718 l~~~~-~~~l~~l~~L~~l~ls~N~l~~ 744 (893)
++... ...+..++.|+.+++++|+++.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCCHHHCCCCCCCEEECCCCCCCC
T ss_conf 5888882565379999999897996886
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.70 E-value=6.6e-17 Score=95.99 Aligned_cols=41 Identities=32% Similarity=0.371 Sum_probs=13.5
Q ss_pred HHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEECCCCCC
Q ss_conf 540367651124433378740-00025874466121888868
Q 002679 678 LEKLIHLSELDLSHNFLGKEI-PSQICNMRSLEMLNLSHNNL 718 (893)
Q Consensus 678 l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l 718 (893)
+..+++|+.|++++|++.... ...+..+++|+.|++++|++
T Consensus 61 ~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCEEECCCCCC
T ss_conf 123355576888898658888825653799999998979968
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.70 E-value=2.7e-19 Score=107.75 Aligned_cols=112 Identities=24% Similarity=0.240 Sum_probs=48.4
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12588666541077774565532212488879844164685875650665403676511244333787400002587446
Q 002679 629 ELGSLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSL 708 (893)
Q Consensus 629 ~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 708 (893)
.+..+++|+.|++++|.+... + .+..+++|+.|++++|.+.. ++.....++.|+.|++++|.++.. +.+..+++|
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~L 117 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL--SGIEKLVNL 117 (198)
T ss_dssp HHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH--HHHHHHHHS
T ss_pred HHHCCCCCCEEECCCCCCCCC-C-CCCCCCCCCCHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf 776260461519944689986-4-42478253573413534321-000033221233333333222222--222222234
Q ss_pred CEEECCCCCCCCCCC-HHHHCCCCCCEEECCCCCCCCC
Q ss_conf 612188886898772-1111299997897327823003
Q 002679 709 EMLNLSHNNLSDFIP-RCFEEMNGLLYIDISYNELHGP 745 (893)
Q Consensus 709 ~~L~Ls~N~l~~~~~-~~l~~l~~L~~l~ls~N~l~~~ 745 (893)
+.|++++|+++.... ..+..++.|+.+++++|++...
T Consensus 118 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred CCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCCC
T ss_conf 11123410212554221236777630234279843467
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.64 E-value=5.1e-18 Score=101.47 Aligned_cols=128 Identities=24% Similarity=0.228 Sum_probs=76.1
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCC
Q ss_conf 41047653326870266456778601258866654107777456553221248887984416468587565066540367
Q 002679 604 SEIGKLSSLIKLILRRNQLFGQLPSELGSLIQLEYLDLSSNRLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIH 683 (893)
Q Consensus 604 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 683 (893)
..+..+++|++|++++|.+... ..+..+++|+.|++++|.+.. ++.....+++|+.|++++|.++.. ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i--~~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL--SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCC--CCHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH--HHHHHHHH
T ss_pred HHHHCCCCCCEEECCCCCCCCC--CCCCCCCCCCCHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC
T ss_conf 6776260461519944689986--442478253573413534321-000033221233333333222222--22222223
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCHH----------HHCCCCCCEEE
Q ss_conf 6511244333787400-00258744661218888689877211----------11299997897
Q 002679 684 LSELDLSHNFLGKEIP-SQICNMRSLEMLNLSHNNLSDFIPRC----------FEEMNGLLYID 736 (893)
Q Consensus 684 L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------l~~l~~L~~l~ 736 (893)
|+.|++++|+++.... ..+..+++|+.|++++|++....+.. +..++.|+.+|
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEC
T ss_conf 4111234102125542212367776302342798434676322220558999998788958769
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.3e-15 Score=89.68 Aligned_cols=86 Identities=27% Similarity=0.192 Sum_probs=33.5
Q ss_pred CCCCCCEECCCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 8866654107777-456553221248887984416468587565066540367651124433378740000258744661
Q 002679 632 SLIQLEYLDLSSN-RLSNSIPRSLGNLVKLHYLNLSTNQFIQEIPIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEM 710 (893)
Q Consensus 632 ~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 710 (893)
.+++|++|++++| .+..+.+..|.++++|+.|++++|+++.+.+..|..+++|+.|+|++|+++...+..|.. .+|+.
T Consensus 29 ~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~l~~ 107 (156)
T d2ifga3 29 GAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LSLQE 107 (156)
T ss_dssp SCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CCCCE
T ss_pred CCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCC-CCCCC
T ss_conf 76565743168986644369212256666672162021247742011124554333322678785157456335-32124
Q ss_pred EECCCCCC
Q ss_conf 21888868
Q 002679 711 LNLSHNNL 718 (893)
Q Consensus 711 L~Ls~N~l 718 (893)
|+|++|++
T Consensus 108 L~L~~Np~ 115 (156)
T d2ifga3 108 LVLSGNPL 115 (156)
T ss_dssp EECCSSCC
T ss_pred CCCCCCCC
T ss_conf 33579863
No 33
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4.2e-12 Score=72.38 Aligned_cols=68 Identities=34% Similarity=0.239 Sum_probs=31.4
Q ss_pred CCCCCCCCEEECCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 248887984416468587565--06654036765112443337874000025874466121888868987
Q 002679 654 LGNLVKLHYLNLSTNQFIQEI--PIKLEKLIHLSELDLSHNFLGKEIPSQICNMRSLEMLNLSHNNLSDF 721 (893)
Q Consensus 654 l~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 721 (893)
...++.|+.|+|++|+++... +..+..+++|+.|+|++|.+....+-.+.....|+.|++++|++...
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred HHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCC
T ss_conf 9748787886377766667731588986588561000435721342344222033104266489976767
No 34
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=4.6e-12 Score=72.17 Aligned_cols=69 Identities=26% Similarity=0.110 Sum_probs=30.2
Q ss_pred HHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCC
Q ss_conf 6540367651124433378740--00025874466121888868987721111299997897327823003
Q 002679 677 KLEKLIHLSELDLSHNFLGKEI--PSQICNMRSLEMLNLSHNNLSDFIPRCFEEMNGLLYIDISYNELHGP 745 (893)
Q Consensus 677 ~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~ls~N~l~~~ 745 (893)
....++.|++|+|++|+++... +..+..+++|+.|++++|.++...+-.+.....++.+++++||+.+.
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred HHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCC
T ss_conf 89748787886377766667731588986588561000435721342344222033104266489976767
No 35
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.86 E-value=2.5e-09 Score=58.68 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=43.0
Q ss_pred CCCCCCCCCEEECCCCCCCC----CCCHHHHHCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCC---
Q ss_conf 12488879844164685875----6506654036765112443337874----000025874466121888868987---
Q 002679 653 SLGNLVKLHYLNLSTNQFIQ----EIPIKLEKLIHLSELDLSHNFLGKE----IPSQICNMRSLEMLNLSHNNLSDF--- 721 (893)
Q Consensus 653 ~l~~l~~L~~L~Ls~N~l~~----~~~~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~--- 721 (893)
++...+.|+.|+|++|.+.. .+...+...+.|++|+|++|.+... +...+...++|+.|++++|.+...
T Consensus 39 ~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~ 118 (167)
T d1pgva_ 39 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 118 (167)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
T ss_conf 97637764540120156215679887531000234330033010214599999999998489389877887768886579
Q ss_pred ----CCHHHHCCCCCCEEECCCCC
Q ss_conf ----72111129999789732782
Q 002679 722 ----IPRCFEEMNGLLYIDISYNE 741 (893)
Q Consensus 722 ----~~~~l~~l~~L~~l~ls~N~ 741 (893)
+...+...+.|..++++++.
T Consensus 119 ~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 119 VEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHHCCCCCEEECCCCC
T ss_conf 999999999729985386486888
No 36
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.43 E-value=9.1e-08 Score=51.02 Aligned_cols=91 Identities=15% Similarity=0.193 Sum_probs=39.4
Q ss_pred CCCCCCCCCEEECCCCCCCCCC----CHHHHHCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCEEEC--CCCCCCCC-
Q ss_conf 1248887984416468587565----06654036765112443337874----0000258744661218--88868987-
Q 002679 653 SLGNLVKLHYLNLSTNQFIQEI----PIKLEKLIHLSELDLSHNFLGKE----IPSQICNMRSLEMLNL--SHNNLSDF- 721 (893)
Q Consensus 653 ~l~~l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~- 721 (893)
++...+.|+.|++++|.+.... ...+...++++.+++++|.+... +...+...++|+.++| ++|.+...
T Consensus 41 al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 41 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH
T ss_conf 88419825743015896117789999987752122101210254322014788999998486524773216778676799
Q ss_pred ---CCHHHHCCCCCCEEECCCCCCC
Q ss_conf ---7211112999978973278230
Q 002679 722 ---IPRCFEEMNGLLYIDISYNELH 743 (893)
Q Consensus 722 ---~~~~l~~l~~L~~l~ls~N~l~ 743 (893)
+...+...+.|+.+++++++..
T Consensus 121 ~~~La~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 121 EMEIANMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf 9999999984998478858189876
No 37
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.24 E-value=9.8e-08 Score=50.87 Aligned_cols=14 Identities=7% Similarity=-0.014 Sum_probs=5.9
Q ss_pred CCCCCCCEEECCCC
Q ss_conf 58744661218888
Q 002679 703 CNMRSLEMLNLSHN 716 (893)
Q Consensus 703 ~~l~~L~~L~Ls~N 716 (893)
...+.|+.|+++.+
T Consensus 129 ~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 129 EKNTTLLKFGYHFT 142 (166)
T ss_dssp HHCSSCCEEECCCS
T ss_pred HHCCCCCEEECCCC
T ss_conf 84998478858189
Done!