Query 002682
Match_columns 893
No_of_seqs 379 out of 1805
Neff 4.6
Searched_HMMs 29240
Date Tue Mar 26 18:00:13 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002682.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1398-1402//hhsearch_pdb/002682hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wul_A Glutaredoxin related pr 1.0 1 1 157.8 10.3 86 425-510 20-111 (118)
2 1uhw_A Pleckstrin; three-helix 1.0 1 1 156.9 8.6 93 529-621 3-107 (109)
3 3l4n_A Monothiol glutaredoxin- 1.0 1 1 154.1 6.7 90 420-510 10-105 (127)
4 1v3f_A Pleckstrin 2; three-hel 1.0 1 1 153.0 7.3 90 529-618 3-105 (120)
5 3ml6_A Chimeric complex betwee 1.0 1 1 152.6 7.5 90 529-619 4-95 (385)
6 3zyw_A Glutaredoxin-3; metal b 1.0 1 1 151.0 7.9 86 424-509 15-105 (111)
7 2pbi_A Regulator of G-protein 1.0 1 1 150.2 9.5 120 533-671 21-143 (424)
8 2cso_A Pleckstrin; DEP domain, 1.0 1 1 149.4 9.7 95 524-618 8-114 (127)
9 2ysr_A DEP domain-containing p 1.0 1 1 148.8 6.0 82 535-616 12-104 (105)
10 2wem_A Glutaredoxin-related pr 1.0 1 1 147.5 10.4 85 425-509 20-110 (118)
No 1
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=1.00 E-value=1 Score=157.79 Aligned_cols=86 Identities=21% Similarity=0.396 Sum_probs=81.2
Q ss_pred CCEEEEECC-----CCHHHHHHHHHHHHCCC-CEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCEEECCCHHHHHHHHC
Q ss_conf 739999819-----99349999999985599-239998579946899999993999954499747130450767976744
Q 002682 425 GRVILYTRL-----GCQESREVRLFLYWKRL-RYVEINIDVYPSRKMELEKFAGSSAVPKVFFNEILMGGLSELKALDES 498 (893)
Q Consensus 425 gkIvIYTks-----gCp~CkrAK~lL~~~GI-~YeeIDId~d~e~reELkk~sG~~TVPqIFInGe~IGG~DeL~eL~es 498 (893)
++|+||++. .||||.+|+++|..+++ +|.++||+.+++.+++|.+++|++|||||||||++|||||+|.+|+++
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g~~IGG~Ddl~~l~~~ 99 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQN 99 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETTEEEECHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHC
T ss_conf 99899976899999887899999999980996738641557878999999863578777476999897778999999987
Q ss_pred CCCHHHHHHHHH
Q ss_conf 961699999872
Q 002682 499 GKLDEKIEYLIT 510 (893)
Q Consensus 499 GeL~~lLk~~~~ 510 (893)
|+|+.+|+.+--
T Consensus 100 GeL~~lL~~~Gi 111 (118)
T 2wul_A 100 GDLVEELKKLGI 111 (118)
T ss_dssp THHHHHHHHTTC
T ss_pred CCHHHHHHHCCC
T ss_conf 889999998497
No 2
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=1.00 E-value=1 Score=156.86 Aligned_cols=93 Identities=24% Similarity=0.370 Sum_probs=86.0
Q ss_pred CCCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCCCCCCC-----
Q ss_conf 885339999999995038711110200116603554634689999861-02688999999999972333311246-----
Q 002682 529 SSSGAIDELALIVLKMKENVVVKDRFYKMRRFTNCFLGSEAVNFLSED-QYLEREEAVEFGRKLASKLFFRHVLD----- 602 (893)
Q Consensus 529 S~s~~L~eLa~ii~~mk~gi~IKDRr~~LrtYk~CF~GsELVDWLie~-~v~sReEAv~lGQ~Lle~GlI~hV~~----- 602 (893)
+.++++..|+..|++...|+.+++|+|++++|++||+|+|+|+||+++ .+.+|.||+.+||.|+++|||+||.+
T Consensus 3 ~~~~~l~~Lv~~Mqd~~~Gv~~~~r~~~~~~~~~cF~GselVdWLi~~~~~~~R~EAv~lgq~Ll~~G~i~hV~d~~~~~ 82 (109)
T 1uhw_A 3 SGSSGLGALYLSMKDPEKGIKELNLEKDKKVFNHCLTGSGVIDWLVSNKLVRNRQEGLMISASLLSEGYLQPAGDLSKNA 82 (109)
T ss_dssp SSSTTHHHHHHHHHCTTTSCCCEEEESSSCEEEEECCHHHHHHHHHHHTSSSSHHHHHHHHHHHHHHTSSEECSSSHHHH
T ss_pred CCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 77567999999975889994136568877982654001599999998588899999999999999789278675453222
Q ss_pred -----CCCCCCC-CCEEEECCCCCC
Q ss_conf -----5544567-732796279985
Q 002682 603 -----ENLFEDG-NHLYRFLDHDPL 621 (893)
Q Consensus 603 -----~~~F~D~-~~LYRF~~ddP~ 621 (893)
++.|.|+ .+||||+++-|.
T Consensus 83 ~~~~~~~~F~D~~~~lYrF~~~~~~ 107 (109)
T 1uhw_A 83 ADGIAENPFLDSPDAFYYFPDSGPS 107 (109)
T ss_dssp HHHSSSCCCCCCSSCCEECTTSSSC
T ss_pred CCCCCCCCEECCCCCEEEECCCCCC
T ss_conf 2345545110599727887677888
No 3
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=154.07 Aligned_cols=90 Identities=23% Similarity=0.375 Sum_probs=80.2
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHC---CCCEEEEECCCC---HHHHHHHHHHHCCCCCCEEEECCEEECCCHHHH
Q ss_conf 67997739999819993499999999855---992399985799---468999999939999544997471304507679
Q 002682 420 PLVMKGRVILYTRLGCQESREVRLFLYWK---RLRYVEINIDVY---PSRKMELEKFAGSSAVPKVFFNEILMGGLSELK 493 (893)
Q Consensus 420 ~~~MkgkIvIYTksgCp~CkrAK~lL~~~---GI~YeeIDId~d---~e~reELkk~sG~~TVPqIFInGe~IGG~DeL~ 493 (893)
.+.|. +|+||++++||||.+||++|.+. +++|++++|+.+ .+.++++.+.+|++|||||||||++|||||++.
T Consensus 10 ii~~~-~Vvvysk~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G~~IGG~ddl~ 88 (127)
T 3l4n_A 10 ILDLS-PIIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNGVSRGGNEEIK 88 (127)
T ss_dssp HHTSC-SEEEEECTTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTEECCCHHHHH
T ss_pred HHCCC-CEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCEEECCHHHHH
T ss_conf 97469-88999729996489999999970255898389993388999999999999709987666999998973879999
Q ss_pred HHHHCCCCHHHHHHHHH
Q ss_conf 76744961699999872
Q 002682 494 ALDESGKLDEKIEYLIT 510 (893)
Q Consensus 494 eL~esGeL~~lLk~~~~ 510 (893)
+|+++|+|+.+|+.+..
T Consensus 89 ~l~~~G~L~~lL~~~g~ 105 (127)
T 3l4n_A 89 KLHTQGKLLESLQVWSD 105 (127)
T ss_dssp HHHHTTCHHHHHHHTCT
T ss_pred HHHHCCCHHHHHHHHCC
T ss_conf 99887988999998568
No 4
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=1.00 E-value=1 Score=152.99 Aligned_cols=90 Identities=23% Similarity=0.305 Sum_probs=83.9
Q ss_pred CCCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCCCCCC------
Q ss_conf 885339999999995038711110200116603554634689999861-0268899999999997233331124------
Q 002682 529 SSSGAIDELALIVLKMKENVVVKDRFYKMRRFTNCFLGSEAVNFLSED-QYLEREEAVEFGRKLASKLFFRHVL------ 601 (893)
Q Consensus 529 S~s~~L~eLa~ii~~mk~gi~IKDRr~~LrtYk~CF~GsELVDWLie~-~v~sReEAv~lGQ~Lle~GlI~hV~------ 601 (893)
+.++++.+|+..|+++..|+.+++|+|++++|++||+|+|+|+||+++ .+.+|.||+.+||.|+++|||+||.
T Consensus 3 ~~~~~l~~L~~~m~~~~~Gv~i~~rr~~~k~y~~cF~GsdlVdWL~~~~~~~sR~eAv~lgq~Ll~~G~i~hV~~~s~~~ 82 (120)
T 1v3f_A 3 SGSSGLHRIVDKMHDTSTGIRPSPNMEQGSTYKKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGA 82 (120)
T ss_dssp CSCSHHHHHHHHHTCSSSSCCCCCCCSSSSCCSSCEEHHHHHHHHHHTTSCSSHHHHHHHHHHHHHHTSEEECSSSSCSS
T ss_pred CCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC
T ss_conf 87315999999986716897055568736881616102999999998588799999999999999889868753321100
Q ss_pred -----CCCCCCCCC-CEEEECCC
Q ss_conf -----655445677-32796279
Q 002682 602 -----DENLFEDGN-HLYRFLDH 618 (893)
Q Consensus 602 -----~~~~F~D~~-~LYRF~~d 618 (893)
+.+.|.|++ +||||.+.
T Consensus 83 ~~~~~~~~~f~d~~~~lYrF~~~ 105 (120)
T 1v3f_A 83 IRSGDLAEQFLDDSTALYTFAES 105 (120)
T ss_dssp CCCSSCCCCCCCSSSCEEEECSS
T ss_pred CCCCCCCCCEECCCCCEEEECHH
T ss_conf 02455556333389617886710
No 5
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=1.00 E-value=1 Score=152.62 Aligned_cols=90 Identities=24% Similarity=0.391 Sum_probs=83.6
Q ss_pred CCCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHH--CCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 885339999999995038711110200116603554634689999861--026889999999999723333112465544
Q 002682 529 SSSGAIDELALIVLKMKENVVVKDRFYKMRRFTNCFLGSEAVNFLSED--QYLEREEAVEFGRKLASKLFFRHVLDENLF 606 (893)
Q Consensus 529 S~s~~L~eLa~ii~~mk~gi~IKDRr~~LrtYk~CF~GsELVDWLie~--~v~sReEAv~lGQ~Lle~GlI~hV~~~~~F 606 (893)
+.+.++.+|+..|++...|+.++||+|++++|++||+|+|||+||+++ ++.+|+||+.+||.|+++|+|+||.++|.|
T Consensus 4 ~~~~~l~~i~~~M~~~~~Gl~i~dr~~~~~~~~~~F~G~elVdWL~~~~~~~~~R~eA~~~g~~Ll~~G~i~hv~~~~~F 83 (385)
T 3ml6_A 4 SVHMDMASVTKAMAAPESGLEVRDRMWLKITIPNAFLGSDVVDWLYHHVEGFPERREARKYASGLLKAGLIRHTVNKITF 83 (385)
T ss_dssp ---CCHHHHHHHHHSTTSSSCCEEECCSSCCEEEEEEHHHHHHHHHHTCCSCSSHHHHHHHHHHHHHHSSEEESSSCSSC
T ss_pred CCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEE
T ss_conf 55589999999962989995547568876899875885999999987367789989999999988767968976774014
Q ss_pred CCCCCEEEECCCC
Q ss_conf 5677327962799
Q 002682 607 EDGNHLYRFLDHD 619 (893)
Q Consensus 607 ~D~~~LYRF~~dd 619 (893)
.|++ ||||.+..
T Consensus 84 ~d~~-~y~f~~~~ 95 (385)
T 3ml6_A 84 SEQC-YYVFGDLS 95 (385)
T ss_dssp CSSS-EEEECCCC
T ss_pred CCCC-EEEEECCC
T ss_conf 3760-49960401
No 6
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=1.00 E-value=1 Score=150.99 Aligned_cols=86 Identities=19% Similarity=0.331 Sum_probs=80.8
Q ss_pred CCCEEEEEC-----CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCEEECCCHHHHHHHHC
Q ss_conf 773999981-----999349999999985599239998579946899999993999954499747130450767976744
Q 002682 424 KGRVILYTR-----LGCQESREVRLFLYWKRLRYVEINIDVYPSRKMELEKFAGSSAVPKVFFNEILMGGLSELKALDES 498 (893)
Q Consensus 424 kgkIvIYTk-----sgCp~CkrAK~lL~~~GI~YeeIDId~d~e~reELkk~sG~~TVPqIFInGe~IGG~DeL~eL~es 498 (893)
..+|+||++ ++||+|++|+++|+++|++|+++||+.+++.+++|.+++|+++||+|||||++|||++++.+++++
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g~~iGG~d~l~~l~~~ 94 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELIGGLDIIKELEAS 94 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETTEEEECHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCEEEECHHHHHHHHHC
T ss_conf 09889998068899855269999999998699749998848989999999997979989899899999469999999977
Q ss_pred CCCHHHHHHHH
Q ss_conf 96169999987
Q 002682 499 GKLDEKIEYLI 509 (893)
Q Consensus 499 GeL~~lLk~~~ 509 (893)
|+|.++|+.+.
T Consensus 95 G~L~~~L~~a~ 105 (111)
T 3zyw_A 95 EELDTICPKAA 105 (111)
T ss_dssp TCHHHHSCCCC
T ss_pred CCHHHHHHHCC
T ss_conf 97999998370
No 7
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=1.00 E-value=1 Score=150.18 Aligned_cols=120 Identities=16% Similarity=0.282 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCC
Q ss_conf 3999999999503871111020011660355463468999986102688999999999972333311246554--45677
Q 002682 533 AIDELALIVLKMKENVVVKDRFYKMRRFTNCFLGSEAVNFLSEDQYLEREEAVEFGRKLASKLFFRHVLDENL--FEDGN 610 (893)
Q Consensus 533 ~L~eLa~ii~~mk~gi~IKDRr~~LrtYk~CF~GsELVDWLie~~v~sReEAv~lGQ~Lle~GlI~hV~~~~~--F~D~~ 610 (893)
++..++..|++...|+.|++|++++++|++||+|+|+|+||+++...++.||+++|+.|+++|||+||.+.|. |+|++
T Consensus 21 ~~e~lv~~M~~~~~Gv~i~~~~~~~~~~p~~F~Gsd~V~WL~~~~~~~~~EA~~lg~~L~~~Gyi~~v~d~~~~~fk~d~ 100 (424)
T 2pbi_A 21 KIEALVKDMQNPETGVRMHNQRVLVTSVPHAMTGGDVLQWITQRLWISNLEAQNLGNFIVKYGYIYPLQDPKNLILKPDS 100 (424)
T ss_dssp HHHHHHHHHTCTTTSCCCCCCSSCCCSSCCCEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEESSSTTCCSCCSSS
T ss_pred HHHHHHHHHHCCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
T ss_conf 39999999728789977523154116677764037999999981797869999999999978987767766666243798
Q ss_pred CEEEECCCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 3279627998-534455567876446899998899999999999999856235994022013
Q 002682 611 HLYRFLDHDP-LVSSQCHNIPRGIIDAKPKPISEIALRLRFLSYAIFEAYLSEDGRHVDYRT 671 (893)
Q Consensus 611 ~LYRF~~ddP-~~~sqc~n~p~g~~~~~~kp~~ev~~~Lr~l~~~ll~~yv~~dG~~VDY~~ 671 (893)
+||||+ .| +|+++| + .-...+-+-.|.+ ..+...|...+|+.
T Consensus 101 ~~Yrfq--~py~wps~~-w---------~~~~~dyaiyl~k-------r~~~~~~~l~~~e~ 143 (424)
T 2pbi_A 101 SLYRFQ--TPYFWPTQQ-W---------PAEDTDYAIYLAK-------RNIKKKGILEEYEK 143 (424)
T ss_dssp CEEEEC--CGGGSCCSS-C---------CCCHHHHHHHHHH-------HHHTSSSCCCHHHH
T ss_pred EEEEEC--CCCCCCCCC-C---------CCCHHHHHHHHHH-------HHHHHCCCCCHHHH
T ss_conf 148957--865676667-7---------8430378999887-------66650677315678
No 8
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31
Probab=1.00 E-value=1 Score=149.41 Aligned_cols=95 Identities=20% Similarity=0.326 Sum_probs=86.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHCCCCCCC--
Q ss_conf 998888853399999999950387111102001166035546346899998610-26889999999999723333112--
Q 002682 524 GEDDLSSSGAIDELALIVLKMKENVVVKDRFYKMRRFTNCFLGSEAVNFLSEDQ-YLEREEAVEFGRKLASKLFFRHV-- 600 (893)
Q Consensus 524 ge~~~S~s~~L~eLa~ii~~mk~gi~IKDRr~~LrtYk~CF~GsELVDWLie~~-v~sReEAv~lGQ~Lle~GlI~hV-- 600 (893)
.+..++.+.++..|+..|++...|+.+++|+|++++|++||+|+|+|+||+++. +.+|.||+.+||.|+++|||+||
T Consensus 8 ~s~~l~~~~~l~~Lv~~Mqd~~~GV~~~~r~~~~~~~~~cF~GsdlVdWLl~~~~~~sR~EAv~lg~~Ll~~G~i~hV~d 87 (127)
T 2cso_A 8 RSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKIFNHCFTGNCVIDWLVSNQSVRNRQEGLMIASSLLNEGYLQPAGD 87 (127)
T ss_dssp SCCSSCTTCCHHHHHHHHHSSSSSCCCEEEEETTEEEEEEEEHHHHHHHHHHTTSCSSHHHHHHHHHHHHHHTSSEEESH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEEECCEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCC
T ss_conf 44448876689999999758899931265786569826540005999999985787999999999999997994886733
Q ss_pred --------CCCCCCCCC-CCEEEECCC
Q ss_conf --------465544567-732796279
Q 002682 601 --------LDENLFEDG-NHLYRFLDH 618 (893)
Q Consensus 601 --------~~~~~F~D~-~~LYRF~~d 618 (893)
..++.|.|+ .+||||+++
T Consensus 88 ~s~~~~~~~~~~~f~dd~~~lYrF~~~ 114 (127)
T 2cso_A 88 MSKSAVDGTAENPFLDNPDAFYYFPDS 114 (127)
T ss_dssp HHHHHHHSSCSCCCCCCTTCEEECSSS
T ss_pred CCCCCCCCCCCCCEECCCCCEEEECCC
T ss_conf 334433466523044589867886678
No 9
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=148.78 Aligned_cols=82 Identities=18% Similarity=0.393 Sum_probs=75.3
Q ss_pred HHHHHHHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCCCCCCCCC--
Q ss_conf 999999995038711110200116603554634689999861--------0268899999999997233331124655--
Q 002682 535 DELALIVLKMKENVVVKDRFYKMRRFTNCFLGSEAVNFLSED--------QYLEREEAVEFGRKLASKLFFRHVLDEN-- 604 (893)
Q Consensus 535 ~eLa~ii~~mk~gi~IKDRr~~LrtYk~CF~GsELVDWLie~--------~v~sReEAv~lGQ~Lle~GlI~hV~~~~-- 604 (893)
.-+..+++.|+.+++++||+|++++|++||+|+||||||+++ .+.+|+||+.+||.||+.|+|+||.+++
T Consensus 12 ~lw~~ii~~~~~g~~ikdrr~~lk~y~~CF~GsE~VdWL~~~l~~~~~fg~~~sR~eAv~lgq~Ll~~gvi~hV~~~~~~ 91 (105)
T 2ysr_A 12 KLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWGS 91 (105)
T ss_dssp HHHHHHHHHHHHSCSCCCCCCSSSSCSSCEEHHHHHHHHHHHHHHSSSSTTTCCHHHHHHHHHHHHHTTSSEESSCCCSC
T ss_pred HHHHHHHHHHHCCCCCCEEEECCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf 99999999997599753234688998860352689999998251235667668999999999999988986865674576
Q ss_pred -CCCCCCCEEEEC
Q ss_conf -445677327962
Q 002682 605 -LFEDGNHLYRFL 616 (893)
Q Consensus 605 -~F~D~~~LYRF~ 616 (893)
.|+|+++||||.
T Consensus 92 ~~F~D~~~lYrF~ 104 (105)
T 2ysr_A 92 ENVDDNNQLFRFP 104 (105)
T ss_dssp SCCCSSSCEEECC
T ss_pred CCCCCCCEEEEEC
T ss_conf 6263798058836
No 10
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=1.00 E-value=1 Score=147.54 Aligned_cols=85 Identities=22% Similarity=0.422 Sum_probs=80.7
Q ss_pred CCEEEEECC-----CCHHHHHHHHHHHHCCCC-EEEEECCCCHHHHHHHHHHHCCCCCCEEEECCEEECCCHHHHHHHHC
Q ss_conf 739999819-----993499999999855992-39998579946899999993999954499747130450767976744
Q 002682 425 GRVILYTRL-----GCQESREVRLFLYWKRLR-YVEINIDVYPSRKMELEKFAGSSAVPKVFFNEILMGGLSELKALDES 498 (893)
Q Consensus 425 gkIvIYTks-----gCp~CkrAK~lL~~~GI~-YeeIDId~d~e~reELkk~sG~~TVPqIFInGe~IGG~DeL~eL~es 498 (893)
.+|+||++. +||||++|+++|++++++ |+++||+.+++.+++|.+++|+++||+|||||++|||||++.+|+++
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g~~IGG~d~l~~l~~~ 99 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQN 99 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETTEEEESHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCEEEECHHHHHHHHHC
T ss_conf 98899992479998567999999999976999877998278889999999996899757499999799676999999887
Q ss_pred CCCHHHHHHHH
Q ss_conf 96169999987
Q 002682 499 GKLDEKIEYLI 509 (893)
Q Consensus 499 GeL~~lLk~~~ 509 (893)
|+|.++|+.+-
T Consensus 100 G~L~~~L~~~g 110 (118)
T 2wem_A 100 GDLVEELKKLG 110 (118)
T ss_dssp SHHHHHHHHTT
T ss_pred CCHHHHHHHCC
T ss_conf 98799999859
Done!