Query 002687
Match_columns 892
No_of_seqs 274 out of 3009
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 05:06:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15101 protease3; Provisiona 100.0 1.7E-76 3.7E-81 717.8 71.4 801 30-891 36-867 (961)
2 PTZ00432 falcilysin; Provision 100.0 4.9E-62 1.1E-66 578.3 68.7 802 38-888 92-1042(1119)
3 COG1025 Ptr Secreted/periplasm 100.0 1.9E-60 4.1E-65 517.7 67.7 805 31-891 17-847 (937)
4 KOG0959 N-arginine dibasic con 100.0 1.5E-58 3.2E-63 513.7 66.7 809 30-889 20-860 (974)
5 COG1026 Predicted Zn-dependent 100.0 1.9E-56 4.2E-61 488.3 59.4 792 38-886 22-894 (978)
6 KOG2019 Metalloendoprotease HM 100.0 5.2E-54 1.1E-58 440.9 58.4 812 11-886 32-924 (998)
7 KOG0960 Mitochondrial processi 100.0 3E-52 6.4E-57 402.8 34.9 406 37-469 33-450 (467)
8 COG0612 PqqL Predicted Zn-depe 100.0 2.3E-52 4.9E-57 460.7 38.5 410 37-469 16-432 (438)
9 TIGR02110 PQQ_syn_pqqF coenzym 100.0 3.8E-47 8.3E-52 421.6 60.5 333 40-392 2-346 (696)
10 KOG2067 Mitochondrial processi 100.0 6.5E-45 1.4E-49 352.4 31.3 401 36-465 23-442 (472)
11 KOG0961 Predicted Zn2+-depende 100.0 3.8E-36 8.3E-41 309.2 47.8 792 40-887 23-919 (1022)
12 TIGR02110 PQQ_syn_pqqF coenzym 100.0 3.7E-36 7.9E-41 334.2 37.2 334 526-883 2-347 (696)
13 COG0612 PqqL Predicted Zn-depe 100.0 2.5E-36 5.4E-41 333.1 31.1 348 523-891 16-373 (438)
14 KOG0960 Mitochondrial processi 100.0 5.3E-33 1.2E-37 269.6 28.9 345 523-891 33-391 (467)
15 PRK15101 protease3; Provisiona 100.0 6E-33 1.3E-37 337.4 32.6 345 523-886 43-400 (961)
16 KOG2067 Mitochondrial processi 100.0 2.8E-29 6.2E-34 244.1 23.2 350 523-892 24-388 (472)
17 PTZ00432 falcilysin; Provision 100.0 1.5E-26 3.3E-31 275.8 31.3 343 528-888 96-502 (1119)
18 KOG2583 Ubiquinol cytochrome c 99.9 2E-24 4.4E-29 211.4 36.5 384 38-459 23-412 (429)
19 COG1025 Ptr Secreted/periplasm 99.9 2.2E-25 4.7E-30 244.5 28.7 347 521-886 21-379 (937)
20 KOG0959 N-arginine dibasic con 99.9 4.6E-24 9.9E-29 239.1 29.2 329 523-871 27-369 (974)
21 PF00675 Peptidase_M16: Insuli 99.9 1.9E-22 4E-27 186.8 12.5 147 48-203 1-148 (149)
22 PF05193 Peptidase_M16_C: Pept 99.9 1E-21 2.2E-26 191.0 16.1 181 209-392 1-184 (184)
23 COG1026 Predicted Zn-dependent 99.8 2.5E-18 5.5E-23 190.3 27.3 345 518-888 13-389 (978)
24 PF05193 Peptidase_M16_C: Pept 99.8 1.2E-18 2.7E-23 169.2 17.0 179 688-882 1-184 (184)
25 KOG2019 Metalloendoprotease HM 99.7 9.3E-16 2E-20 160.1 21.1 333 530-889 60-426 (998)
26 PF00675 Peptidase_M16: Insuli 99.6 4.7E-15 1E-19 137.2 14.9 144 534-681 1-145 (149)
27 KOG2583 Ubiquinol cytochrome c 99.6 7.5E-13 1.6E-17 130.9 28.7 330 526-887 25-365 (429)
28 KOG0961 Predicted Zn2+-depende 99.5 8.1E-13 1.7E-17 138.3 21.6 336 531-890 28-388 (1022)
29 PF08367 M16C_assoc: Peptidase 98.6 6.4E-07 1.4E-11 89.9 15.0 130 530-662 76-216 (248)
30 PF03410 Peptidase_M44: Protei 98.2 3.9E-05 8.5E-10 78.6 15.0 186 41-258 2-194 (590)
31 PHA03081 putative metalloprote 98.1 9.2E-05 2E-09 76.1 15.1 186 41-258 2-194 (595)
32 PF03410 Peptidase_M44: Protei 96.6 0.057 1.2E-06 56.3 14.6 184 527-739 2-196 (590)
33 PHA03081 putative metalloprote 95.7 0.22 4.8E-06 52.2 13.3 185 527-739 2-196 (595)
34 PF08367 M16C_assoc: Peptidase 95.7 0.055 1.2E-06 54.4 9.1 109 45-159 77-193 (248)
35 PF09851 SHOCT: Short C-termin 48.3 45 0.00098 20.7 3.9 23 861-883 7-30 (31)
36 PF01729 QRPTase_C: Quinolinat 33.7 44 0.00096 31.1 3.3 44 685-728 105-148 (169)
37 COG1512 Beta-propeller domains 26.4 3.6E+02 0.0078 27.4 8.4 82 213-311 53-134 (271)
38 COG1725 Predicted transcriptio 21.4 4.7E+02 0.01 22.9 7.0 67 802-884 52-121 (125)
39 PF12108 SF3a60_bindingd: Spli 21.0 74 0.0016 19.4 1.5 11 212-222 16-26 (28)
40 COG1698 Uncharacterized protei 20.3 4.1E+02 0.0089 21.5 5.7 52 615-668 11-62 (93)
No 1
>PRK15101 protease3; Provisional
Probab=100.00 E-value=1.7e-76 Score=717.75 Aligned_cols=801 Identities=14% Similarity=0.138 Sum_probs=577.4
Q ss_pred ccCCCCCCcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCCh-hhHHHHHHHc
Q 002687 30 ELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTN-HDIIKFLESI 108 (892)
Q Consensus 30 ~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~-~~l~~~l~~~ 108 (892)
..+.|++.++..+|+|||+|++++++... .++++++|++||++||.++.|+|||+|||+|+||++||. .++.++++++
T Consensus 36 k~~~d~~~~~~~~L~NGL~v~l~~~~~~~-~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~ 114 (961)
T PRK15101 36 KSEKDPRQYQAIRLDNGMTVLLVSDPQAV-KSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKH 114 (961)
T ss_pred CCCCCccceEEEEeCCCCEEEEEeCCCCc-ceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHh
Confidence 34566777999999999999999988533 588999999999999999999999999999999999985 6899999998
Q ss_pred cCccCCCccccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCcc-cchHHHHHH
Q 002687 109 GAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS-GRMQDAHWV 187 (892)
Q Consensus 109 g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~~-~~~~~~~~~ 187 (892)
|+. .||+|+.|+|+|++++++++ ++.+|++++|++.+|.|+++++++||++|.+|+++..+++ .++.+.+.+
T Consensus 115 Gg~----~NA~T~~d~T~y~~~~~~~~---l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~ 187 (961)
T PRK15101 115 GGS----HNASTASYRTAFYLEVENDA---LPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAE 187 (961)
T ss_pred CCC----ccceECCCceEEEEEcCHHH---HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 754 59999999999999999654 9999999999999999999999999999999999876654 466777777
Q ss_pred HHccCCCCCCCCCCCCHHHhcCC----CHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCC
Q 002687 188 LMMEGSKYAECLPIGLEKVIRTV----SSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP 263 (892)
Q Consensus 188 ~l~~~~~~~~~~~~g~~~~i~~~----t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~ 263 (892)
.+|++|||+ ++.+|+.++|.++ +.++|++||++||+|+||+|+|+||+ ++++++++++++|+.||....+.+..
T Consensus 188 ~~~~~hp~~-~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~-~~~~l~~~~~~~F~~~~~~~~~~~~~ 265 (961)
T PRK15101 188 TINPAHPGS-RFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQ-PLPELAKLAADTFGRVPNKNASVPEI 265 (961)
T ss_pred hCCCCCCcc-cCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCC-CHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 899999999 8999999999997 69999999999999999999999999 99999999999999998754322111
Q ss_pred CCCCCCCCCCceEEeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeecccCc-
Q 002687 264 KFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADD- 342 (892)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~~~~~~- 342 (892)
..+..........+...+..++..+.+.|..|... .........++..+|+++..++|+..|+ ++|++|+++++...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~p~~~-~~~~~~~~~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~ 343 (961)
T PRK15101 266 TVPVVTDAQKGIIIHYVPAQPRKVLRVEFRIDNNS-AKFRSKTDEYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPM 343 (961)
T ss_pred CCCCCCHHHcCeEEEEEECCCCcEEEEEEecCCcH-HHHhhCHHHHHHHHhcCCCCCcHHHHHH-HcCccceeeeccccc
Confidence 11111111111222333456778999999988632 1112234668888998877777887775 78999999987653
Q ss_pred ccccccEEEEEEEecCC---cHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHh
Q 002687 343 LVRPLKAYIMSSSCKER---GTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHF 419 (892)
Q Consensus 343 ~~~~~~~~~i~~~~~~~---~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (892)
...+.|.|.|.+.+.++ +..++++.++++|+++++.|++++|++++|+.+..++. + .+.....+.+..+...+
T Consensus 344 ~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~--~--~~~~~~~~~~~~~~~~~ 419 (961)
T PRK15101 344 VDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFR--Y--PSITRDMDYIEWLADTM 419 (961)
T ss_pred cCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcccc--C--CCCCChHHHHHHHHHHh
Confidence 23567899999998875 78899999999999999999999999999999887652 2 12222333444444443
Q ss_pred hcCCCcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEeCCCCCCC-----------HHHHHH-HHHHHHhhh
Q 002687 420 LCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFST-----------IDDLKN-IVLKIKNLE 487 (892)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~~p~~~~~-----------~~~~~~-~~~~~~~~~ 487 (892)
.+.+. . ........+..+++++|+++++. |.++++.++++.|+...+ .+++.. ++..|...
T Consensus 420 -~~~~~---~-~~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~- 492 (961)
T PRK15101 420 -LRVPV---E-HTLDAPYIADRYDPKAIKARLAE-MTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQK- 492 (961)
T ss_pred -hhCCH---H-HheeCchhhhcCCHHHHHHHHhh-cCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcC-
Confidence 22221 1 11112235788999999999877 889999998888864311 112221 22222211
Q ss_pred ccCCCCCCccCCccccccCCCCCCceeeeEEecCCCeEEEEecCCcEEEEeeCC---CCCCeEEEEEEecCc-CCCCCcc
Q 002687 488 EKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTD---FLDDQVLFTGFSYGG-LSELPES 563 (892)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~NG~~v~~~~~~---~~~~~v~~~~~~~gg-~~~~~~~ 563 (892)
. .......+.....++... .+..... +...++.+.++||++||+++++ ..| .+.+.+.+.+| ..+.+..
T Consensus 493 ~-~~~~l~lP~~n~fip~~~----~~~~~~~-~~~~p~~i~~~~g~~vw~~~d~~f~~~P-k~~i~~~~~~~~~~~~~~~ 565 (961)
T PRK15101 493 A-QNIALSLPELNPYIPDDF----SLIKADK-AYKHPELIVDEPGLRVVYMPSQYFADEP-KADISLVLRNPKAMDSARN 565 (961)
T ss_pred C-CCccCCCCCCCCccCCCC----eeccCCC-CCCCCeEEEcCCCeEEEEeCCCccccCC-CEEEEEEEeCCCccCCHHH
Confidence 1 001111111111111111 1110000 1123578899999999999987 334 57777755544 3444566
Q ss_pred hhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHH
Q 002687 564 EYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEI 643 (892)
Q Consensus 564 ~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~ 643 (892)
.+++.++..++- .+..++.......|.+++.. +.+++.+++++++++++.+|+++.+.+.+|.+ ++++|++
T Consensus 566 ~~l~~L~~~ll~-------~~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~-~~~~fe~ 636 (961)
T PRK15101 566 QVLFALNDYLAG-------LALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTP-TEEQLAQ 636 (961)
T ss_pred HHHHHHHHHHHH-------HHHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCC-CHHHHHH
Confidence 777777655542 23344445555668888888 68999999999999999999999999999888 8999999
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHH-HhcCCCCCCCCC-ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCcccc
Q 002687 644 VMQMAEEVIRAQERDPYTAFANRVKE-INYGNSYFFRPI-RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNG 721 (892)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~ 721 (892)
+|+++++++++...+ ..+...+.. ..+..||++... +.+.|+++|.+++++||++ ++.+.+++++|+||++.+++
T Consensus 637 ~k~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~py~~~~~~~~~l~~it~edl~~f~~~-~~~~~~~~~~v~GNi~~~ea 713 (961)
T PRK15101 637 AKSWYREQLDSAEKG--KAYEQAIMPAQMLSQVPYFERDERRKLLPSITLKDVLAYRDA-LLSGATPEFLVVGNLTEEQV 713 (961)
T ss_pred HHHHHHHHHhhhccc--CcHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHH-HHHhceEEEEEEcCCCHHHH
Confidence 999999999987653 122222221 345678888644 7899999999999999998 66889999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcceeeEEeCCCCCcceEEEEEEeccCCCCcchHHHHHHHHHHHHH
Q 002687 722 IPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLL 801 (892)
Q Consensus 722 ~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l 801 (892)
.++++++++.|+..+... ........+.+... .+.......+..+.++|...... .....++..+|++++
T Consensus 714 ~~l~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~--~~~~~v~~~lLg~~~ 783 (961)
T PRK15101 714 TTLARDVQKQLGADGTEW-------WRGKDVVVDKKQSV-NFEKAGSSTDSALAAVYVPTGYD--EYQSSAYSSLLGQII 783 (961)
T ss_pred HHHHHHHHHHhccCCccc-------ccccceEeCCCCeE-EEecCCCCCCCeEEEEEEeCCCC--CHHHHHHHHHHHHHH
Confidence 999999999887532211 00000111211111 12222222333344444322111 245677889999999
Q ss_pred HHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCcceeEEEEEEe---CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 002687 802 ETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSC---DPEISFKLVDLALDEISRLQKEGPSDEDVSTI 878 (892)
Q Consensus 802 ~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~---~p~~~~~~~~~~~~~l~~l~~~~is~~el~~a 878 (892)
+++||++|||++||+|+|+++..... ..+.+.+.+.+ +|+.+.+.++.+.+++..-.+ ++|++||+++
T Consensus 784 ssrlf~~LRtk~qLgY~V~s~~~~~~--------~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~-~lt~eE~~~~ 854 (961)
T PRK15101 784 QPWFYNQLRTEEQLGYAVFAFPMSVG--------RQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLR-AMKPEEFAQY 854 (961)
T ss_pred hHHHHHHHHHHhhhceEEEEEeeccC--------CeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHH
Confidence 99999999999999999999876422 23334444433 567777878888777543334 7999999999
Q ss_pred HHHHHHhhhhhcC
Q 002687 879 LELEQRAHETGLQ 891 (892)
Q Consensus 879 k~~~~~~~~~~~~ 891 (892)
|+.+++++....+
T Consensus 855 k~~l~~~~~~~~~ 867 (961)
T PRK15101 855 QQALINQLLQAPQ 867 (961)
T ss_pred HHHHHHHhcCCCC
Confidence 9999999877655
No 2
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=4.9e-62 Score=578.25 Aligned_cols=802 Identities=13% Similarity=0.075 Sum_probs=542.1
Q ss_pred cEEEEeCCCcEEEEeeCCCCC-ceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCc
Q 002687 38 VDYGRLDNGLFYYVRCNSKPR-MRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (892)
Q Consensus 38 ~~~~~L~NGl~v~~~~~~~~~-~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~ 116 (892)
+.+.+.+||++|+.++++.+. ..+++.++|++|+ .+..|+||++|||+|+||++||..++...+++.| +|+++
T Consensus 92 ~~~~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~g--l~~~l 165 (1119)
T PTZ00432 92 TVYSHKKTGLQVISLKTNDSSGKEMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGG--FNSFL 165 (1119)
T ss_pred EEEEEcCCCCEEEEEecCCCccceeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcccHHHHHHhcC--cCCCc
Confidence 778899999999999876541 1378899999997 3558999999999999999999999999998776 46788
Q ss_pred cccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHH-----------HHH--------------------HH
Q 002687 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL-----------EKE--------------------RG 165 (892)
Q Consensus 117 na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l-----------~~e--------------------r~ 165 (892)
||+|+.|+|+|++++++ .+++..++++++|++++|.|+++++ +++ |+
T Consensus 166 NA~T~~D~T~Y~~~~~~--e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kg 243 (1119)
T PTZ00432 166 NAYTFKDRTSYLFASTN--EKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSG 243 (1119)
T ss_pred cccCCCCceEEEeccCC--HHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhh
Confidence 99999999999999875 3459999999999999999988863 232 89
Q ss_pred HHHHHHhcCCCccc-chHHHHHHHHccCCCCCCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHH
Q 002687 166 AVLEEYRGNRNASG-RMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVE 244 (892)
Q Consensus 166 ~v~~e~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~ 244 (892)
+|++|+++..+++. ++.+.+.+.+| +|||+ ++++|++++|.++|.++|++||++||+|+||+|+++||+ |++++++
T Consensus 244 VV~~Emk~~~~~p~~~~~~~~~~~lf-~~pY~-~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdi-d~~~~l~ 320 (1119)
T PTZ00432 244 IVYSEMKKRFSDPLSFGYSVIYQNLF-SNVYK-YDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPN-DVTERLE 320 (1119)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHh-CCCCC-CCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCC-CHHHHHH
Confidence 99999999876654 67888889999 99999 899999999999999999999999999999999999999 9999999
Q ss_pred HHHhhhCCCCCCCCCC----C-CCCCCCC---CCCCCceEE--eecCCCCceEEEEE-EecCCCc---------CCC-HH
Q 002687 245 LINTHFGQKKSATDPP----V-IPKFPVP---SHQEPRFSC--FIESEAGGSAVIVS-YKMPVNE---------LKT-IK 303 (892)
Q Consensus 245 ~i~~~f~~~~~~~~~~----~-~~~~~~~---~~~~~~~~~--~~~~~~~~~~v~l~-~~~p~~~---------~~~-~~ 303 (892)
+++++|+.+|...... + .+..+.+ ....++... +......+..+.++ |..++.. ..+ .+
T Consensus 321 ~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~ 400 (1119)
T PTZ00432 321 FVDNYLTKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVD 400 (1119)
T ss_pred HHHHHHhhcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHH
Confidence 9999998887542110 0 0111111 111222211 11223345666665 9884221 123 68
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeee-cccCcccccccEEEEEEE-ecC-------CcHHHHHHHHHHHHHH
Q 002687 304 DYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCS-ASADDLVRPLKAYIMSSS-CKE-------RGTLKALESMLIEVAR 374 (892)
Q Consensus 304 ~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~-~~~~~~~~~~~~~~i~~~-~~~-------~~~~~~~~~i~~~l~~ 374 (892)
++++.+++.+|+++.+|+|++.|++ .|++|++. +++. .....+.|.|.+. +.. +++.++.+.|.++|++
T Consensus 401 ~~AL~VLs~lLggg~sS~L~q~LrE-~GLa~svv~~~~~-~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~ 478 (1119)
T PTZ00432 401 YLALLVLNYLLLGTPESVLYKALID-SGLGKKVVGSGLD-DYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTK 478 (1119)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHh-cCCCcCCCcCccc-CCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHH
Confidence 8999999999999999999999996 79999863 3443 3356788888875 332 3367899999999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhhcc---CCcHHHHHHHHHHhhcCC-CcCC--HHHHHHHHHHHcCCCCHHHHH
Q 002687 375 VRLHGFSEREVSVARALLMSEVESAYLERDQ---MQSTNLRDECLQHFLCKE-PIIG--IEYEARLQKTLLPHISALEVS 448 (892)
Q Consensus 375 l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~l~~vt~~~i~ 448 (892)
++++||++++++++++++..++. +... ..+..++..++..|++|. +... .....+.+...+ .-+...++
T Consensus 479 l~~eGi~~eele~a~~qlef~~r----E~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~-~~~~~y~e 553 (1119)
T PTZ00432 479 VVTEGFNKSAVEASLNNIEFVMK----ELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRI-DNESKYLE 553 (1119)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhh----hccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHH-hcccHHHH
Confidence 99999999999999999887653 2211 124677888888998864 3221 112223333333 23446799
Q ss_pred HHHHHHhcc-CCeEEEEeCCCC--CC-------------------CHHHHHHHHHHHHhhhccCCCCCCccCCccccccC
Q 002687 449 RYSEKLQTS-CSCVIKTIEPQT--FS-------------------TIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVST 506 (892)
Q Consensus 449 ~~~~~~l~~-~~~~~~~~~p~~--~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (892)
+++++||.+ ++.+++++.|+. .. +++++++..++..+ +..++....+++.++.
T Consensus 554 ~Li~k~ll~N~h~~~v~~~p~~s~~~~~~~~~~e~~~L~~~~~~Ls~ee~~~i~~~~~~-----l~~~q~~~~~~e~l~~ 628 (1119)
T PTZ00432 554 KLIEKHLLNNNHRVTVHLEAVESSKYEKEFNKLVKDELKERLSHLTKEQVDEMEKAYEK-----FKKEREADDDPEHLDS 628 (1119)
T ss_pred HHHHHHccCCCeeeEEEEecCCcccHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----HHHHhcCCCChhHHhh
Confidence 999998865 555677777776 32 23333333322222 2222222222222233
Q ss_pred CCCC--CceeeeEE-ecCCCeE-----------EEEecCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcc--hhhhhch
Q 002687 507 KPSP--GNIVQQFE-YENLGAT-----------ELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPES--EYLSCSM 570 (892)
Q Consensus 507 ~~~~--~~i~~~~~-~~~~~~~-----------~~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~--~g~~~~l 570 (892)
+|.. .+|..... +|....+ .....+|+++++++.++ ++.+++.+.+. ....+.. .++. +
T Consensus 629 lP~l~~~DI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T-nGi~y~~~~fd--l~~l~~e~~~yl~-L- 703 (1119)
T PTZ00432 629 FPILSLSDLNKETEEIPTKLYKLSSDSLKENMDLDSDGGSVTVLVHPIES-RGILYLDFAFS--LDSLTVDELKYLN-L- 703 (1119)
T ss_pred cCCCcHHHcCCcccCCcchhhhcccccccccccccccCCCcceEEEecCC-CCeEEEEEEec--CCCCCHHHHhhHH-H-
Confidence 3332 22221111 1110000 01335789999887654 66899999884 3345543 3333 3
Q ss_pred hHHhhhhcCCCCCCHHHHHHHHcCceEEEEEee----c------------ceeEEEEEecChhhHHHHHHHHHHHhcCCC
Q 002687 571 GSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKV----G------------AYMRTFSGDCSPSDLETALQLVYQLFTTNV 634 (892)
Q Consensus 571 ~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~----~------------~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~ 634 (892)
+..++...||++++.+++...+..+.+++++++ + ..++.+++.|+.++++.+++|+.+++.++.
T Consensus 704 ~~~~l~~~gT~~~s~~el~~~i~~~tGg~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~ 783 (1119)
T PTZ00432 704 FKALLKENGTDKLSSEEFTYKREKNLGGLSASTAFYSETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDAD 783 (1119)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhCCCeEEEEEEeccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCC
Confidence 345556699999999999999998877766542 2 236889999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcChHH-HHHHHHHHHhc---------CCCCCCCCC-C-h-----hhhhcCChHHHHHH
Q 002687 635 APGEEEVEIVMQMAEEVIRAQERDPYT-AFANRVKEINY---------GNSYFFRPI-R-I-----SDLQKVDPLKACDY 697 (892)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~-~-~-----~~l~~l~~~~l~~~ 697 (892)
|.+.+.+..+.++.+..+.+...+.+. .+...+.+.+- .+-.+...+ . . +..+.+ .+.|...
T Consensus 784 f~d~~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v-~~~L~~i 862 (1119)
T PTZ00432 784 FSNSKKGVEILKRKINGMKTVFSSKGHKFALKRMKSKFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKV-ESKLNEI 862 (1119)
T ss_pred CCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHH-HHHHHHH
Confidence 977777888888888888877664333 33322222111 000011111 0 1 112222 4456677
Q ss_pred HhhhhCCCCCcEEEEEecCC-ccccHHHHHHhhccCCCCCCCCC-ccCcCCCCCCCc---cCCCcceeeEEeCCCCCcce
Q 002687 698 FNSCFKDPSTFTVVIVGNID-PSNGIPLILQYLGGIPKPPEPIL-HFNRDNLKGLPF---TFPSSIIREVVRSPMVEAQC 772 (892)
Q Consensus 698 ~~~~~~~~~~~~i~v~Gd~~-~~~~~~~i~~~~~~l~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 772 (892)
++..| +++|+.+.|+|+.+ .+.+.+.+..++..++....... ......+..... .++.......+..+. ...
T Consensus 863 ~~~i~-~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~--~V~ 939 (1119)
T PTZ00432 863 RNKLL-SMKNLTVNVTGDSELLDSLLDDSTTFLKKLSSTFKENDNKSSDKVWVKEVLDKKLMESVDKNEFIVLPT--RVN 939 (1119)
T ss_pred HHHHh-CcCCcEEEEEeCHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccCCcccceEEEccC--cee
Confidence 77755 67999999999974 35566666677777753211000 000001110000 011111233343332 222
Q ss_pred EEEEEEec-cCCCCcchHHHHHHHHHHHHH-HHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCcceeEEEEEEeCccc
Q 002687 773 SVQLCFPV-ELKNGTMVEEINYVGFLSKLL-ETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEI 850 (892)
Q Consensus 773 ~v~~~~~~-~~~~~~~~~~~~~~~~L~~~l-~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p~~ 850 (892)
.+..+.+. ...++. ...+.||..+| ++.||+.||+ .|+|||+++... ..|.|.+..+.||+
T Consensus 940 yv~~~~~~~~~~~~~----~~~l~Vl~~~L~~~yLw~~IR~-~GGAYG~~~~~~-----------~~G~~~f~SYRDPn- 1002 (1119)
T PTZ00432 940 FVGMGGKLFDKSDKV----DGSFQVIVHYLKNSYLWKTVRM-SLGAYGVFADLL-----------YTGHVIFMSYADPN- 1002 (1119)
T ss_pred EEEEecccccCCCcc----CHHHHHHHHHHccccchHHHcc-cCCccccCCccC-----------CCCeEEEEEecCCC-
Confidence 33333221 122222 23466777777 5899999997 599999986653 25889999999995
Q ss_pred HHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhhhh
Q 002687 851 SFKLVDLALDEISRLQK--EGPSDEDVSTILELEQRAHET 888 (892)
Q Consensus 851 ~~~~~~~~~~~l~~l~~--~~is~~el~~ak~~~~~~~~~ 888 (892)
+.++++.+.+..+.+.+ ..+|+++++++|...++.+..
T Consensus 1003 ~~~Tl~~f~~~~~~l~~~~~~~~~~~l~~~iig~~~~~D~ 1042 (1119)
T PTZ00432 1003 FEKTLEVYKEVASALREAAETLTDKDLLRYKIGKISNIDK 1042 (1119)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhccCC
Confidence 67789999999999988 569999999999999887653
No 3
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-60 Score=517.65 Aligned_cols=805 Identities=15% Similarity=0.155 Sum_probs=572.4
Q ss_pred cCCCCCCcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChh-hHHHHHHHcc
Q 002687 31 LGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH-DIIKFLESIG 109 (892)
Q Consensus 31 ~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~-~l~~~l~~~g 109 (892)
...|-..++..+|+|||+++++.++... +....|.|++||.+||.+.+|+|||+|||+|.||+|||.. .+..+|++.|
T Consensus 17 ~~~d~r~y~~I~LpNGl~~LlisDP~a~-ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhg 95 (937)
T COG1025 17 PALDDRKYRAIKLPNGLRALLVSDPQAD-KSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHG 95 (937)
T ss_pred CcccCcceeEEECCCCceEEEecCCCCC-ccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcC
Confidence 3445556999999999999999998643 5788999999999999999999999999999999999985 7999999987
Q ss_pred CccCCCccccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCccc-chHHHHHHH
Q 002687 110 AEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASG-RMQDAHWVL 188 (892)
Q Consensus 110 ~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~~~-~~~~~~~~~ 188 (892)
++ .||+|..+.|+|++.+..+ ++..+|+.+++++.+|.|+++.++|||.+|.+|..++..+.+ ++++.....
T Consensus 96 Gs----~NA~T~~~~T~fyFeV~~~---al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~ 168 (937)
T COG1025 96 GS----HNASTAGERTAFYFEVEND---ALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALT 168 (937)
T ss_pred Cc----cccccCCCceeEEEEecHH---HHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhh
Confidence 44 5999999999999999954 599999999999999999999999999999999999877655 566666666
Q ss_pred HccCCCCCCCCCCCCHHHhcC----CCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCC
Q 002687 189 MMEGSKYAECLPIGLEKVIRT----VSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPK 264 (892)
Q Consensus 189 l~~~~~~~~~~~~g~~~~i~~----~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~ 264 (892)
+-++||++ ++..|+.+++.. ...++|++||++||+|+||++||.|.- +++++.+++.++||.+|.+....+...
T Consensus 169 ~np~HP~s-rFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q-~ldeL~~~a~~~F~~Ipn~~~~~p~~p 246 (937)
T COG1025 169 ANPGHPLS-KFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQ-PLDELAKLAADLFGDIPNRARKIPPIP 246 (937)
T ss_pred cCCCCCcc-ccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCC-CHHHHHHHHHHHhCcCCCCCCCCCCCC
Confidence 77899999 999999999988 558999999999999999999999999 999999999999999998665443222
Q ss_pred CCCCCCCCCceEEeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeecccCccc
Q 002687 265 FPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLV 344 (892)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~~~~~~~~ 344 (892)
.++.........+.+.+..+...+.|.|+.++.... ...-...++..++|....+.|...|. +.||+.++.++.....
T Consensus 247 ~p~~~d~~t~~ii~i~p~~~~~~L~i~f~i~~~~~~-~~~~~~~~~s~Lig~es~gsL~~~Lk-~~Glit~l~a~~~~~~ 324 (937)
T COG1025 247 VPVVTDEQTGKIIHIVPAKPRPRLRIYFPIDDNSAK-FRSKPDEYLSHLIGNESPGSLLAWLK-KQGLITELSAGLDPIS 324 (937)
T ss_pred CCCCChHHhCceEEeccCCCCceEEEEEEcCCcccc-cccCCHHHHHHHhccCCCchHHHHHH-hccchhhhcccccccc
Confidence 232233344455666777788999999999864311 11223456778888755555666666 6799999999888776
Q ss_pred ccccEEEEEEEecC---CcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhc
Q 002687 345 RPLKAYIMSSSCKE---RGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLC 421 (892)
Q Consensus 345 ~~~~~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (892)
.++|+|.|.+..+. .+.++++..+++.|+-++.+|+....++...+.....+. + .......+....+...+..
T Consensus 325 ~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~--y--~~~t~~~~~~~~l~~~m~~ 400 (937)
T COG1025 325 GNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFR--Y--PSKTRPMDYVSWLADNMER 400 (937)
T ss_pred CCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhc--c--cccCChHHHHHHHHHhccc
Confidence 78999999988765 456799999999999999999999999988876555432 2 2333444444444443333
Q ss_pred CCCcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEeCCCCC-----------CCHHHHHHHHHHHHhhhccC
Q 002687 422 KEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTF-----------STIDDLKNIVLKIKNLEEKN 490 (892)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~~p~~~-----------~~~~~~~~~~~~~~~~~~~~ 490 (892)
- |+....+ ..-.+..-++++++.++.-+. +++..+....+... ...++........+.... .
T Consensus 401 ~-p~~~~~~----~~~~~~~yd~~~~~~~l~~~~-pen~R~~lis~~~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~-~ 473 (937)
T COG1025 401 E-PVEHTLY----ASLVLPRYDPKAIQERLALMT-PENARLWLISKLEEHDKAAYFYGFPYQVDDYTAQPLDAWQQKA-D 473 (937)
T ss_pred C-Chhhhhc----hhhcccccCHHHHHHHHHhhC-ccceEEEEecCCCCccccceeecCcceecchhhhhhhhhhccc-c
Confidence 3 3322222 123477788999999997665 88888887776432 111222211111111111 1
Q ss_pred CCCCCccCCccccccCCCCCCceeeeEEecCCCeEEEEecCCcEEEEeeCC-C---CCCeEEEEEEecCcCCCCCcchhh
Q 002687 491 ISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTD-F---LDDQVLFTGFSYGGLSELPESEYL 566 (892)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~NG~~v~~~~~~-~---~~~~v~~~~~~~gg~~~~~~~~g~ 566 (892)
..++..+...+.++...+. +..++.++ .+.-+.-..|.++|+++++ + .+..+++.+..++...+ +. .-+
T Consensus 474 ~~~l~lP~~N~fIp~~~~~---~~~~~~~~--~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s-~r-~~V 546 (937)
T COG1025 474 SIELSLPEPNPFIPDDVSL---IKSEKKFT--FPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRS-PR-NQV 546 (937)
T ss_pred cccccCCCCCCCCCccccc---cccccCCC--CchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccC-HH-HHH
Confidence 1112111111222111111 22222222 1233444568899998764 2 23456666655555444 22 222
Q ss_pred hhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHH
Q 002687 567 SCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQ 646 (892)
Q Consensus 567 ~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~ 646 (892)
...+...+++ .-..++. .. ....|.+++...+..+..+++++..+.++.++..+.+.+.+-.. +++.|...|.
T Consensus 547 l~~l~~~la~-dal~~~~---y~--A~~aG~sfs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~-~~~~f~~~K~ 619 (937)
T COG1025 547 LTELYAYLAN-DALDKLS---YQ--ASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPV-DEDRFEQAKS 619 (937)
T ss_pred HHHHHHHHHH-HHHHhhh---hH--HHhcceEEEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCC-CHHHHHHHHH
Confidence 2222333332 1111111 12 22346667777777888999999999999999999999997545 8999999999
Q ss_pred HHHHHHHHhh-cChHHHHHHHHHHHhcCCCCCCCCCChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHH
Q 002687 647 MAEEVIRAQE-RDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLI 725 (892)
Q Consensus 647 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i 725 (892)
++.+++++.. ..|...+.+.+..++- ...+.+....+.++.++.+++.+|.... +++......|.||++.+++.+++
T Consensus 620 ~~~~~~~~a~~~~p~~~~~~~l~~l~~-~~~~s~~e~~~~l~~v~~~e~~~f~~~l-~~~~~lE~lv~Gn~~~~da~~l~ 697 (937)
T COG1025 620 QLSEELKNALTGKPYRQALDGLTGLLQ-VPYWSREERRNALESVSVEEFAAFRDTL-LNGVHLEMLVLGNLTEADATNLA 697 (937)
T ss_pred HHHHHHHhhhhcCCHHHHHHHhhhhhC-CCCcCHHHHHHHhhhccHHHHHHHHHHh-hhccceeeeeeccchHHHHHHHH
Confidence 9999999986 5688888888777663 2233333367888999999999999884 48899999999999999999998
Q ss_pred HHhhccCCCCCCCCCccCcCCCCCCCccCCCcceeeEEeCCCCCcceEEEEEEeccCCCCcchHHHHHHHHHHHHHHHHH
Q 002687 726 LQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKM 805 (892)
Q Consensus 726 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l~s~L 805 (892)
+.....++...... +.+..+..+.+..............+..++.+..... + +...+...++++++...+
T Consensus 698 ~~~~~~l~~~~s~~-------~~~~~~~~~~~~~~~~e~~~~~~~~an~~i~~~~~~~--~-~~~~a~s~Ll~~l~~~~f 767 (937)
T COG1025 698 ETLQKKLPAIGSTW-------YRNPSVYLLKGGTRIFETVGGESDSANAAILYPQQYD--E-IKSSALSSLLGQLIHPWF 767 (937)
T ss_pred HHHHhhhcccCCcc-------cCCCceeccCCCeeEeeeccCCcccccceeEeccccc--h-HHHHHHHHHHHHHHhHHh
Confidence 87766666443311 2222333444444434333333445555566665544 2 345566778999999999
Q ss_pred HHHHhhhcCCeeeeeEEeeccCCCCCCCCCcceeEEEEEEe-CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 002687 806 MQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSC-DPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQR 884 (892)
Q Consensus 806 ~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~ 884 (892)
|+.||++++++|.|++++...... ..+.|.+.... .|+...+.++++.+.+..... ++++++++..|..+++
T Consensus 768 f~~LRTkeQLGY~Vfs~~~~v~~~------~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~-~ms~e~Fe~~k~alin 840 (937)
T COG1025 768 FDQLRTKEQLGYAVFSGPREVGRT------PGIGFLVQSNSKSPSYLLERINAFLETAEPELR-EMSEEDFEQIKKALIN 840 (937)
T ss_pred HHHhhhhhhcceEEEecceeecCc------cceEEEEeCCCCChHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 999999999999999998764421 12344444433 566788888888888877766 5999999999999999
Q ss_pred hhhhhcC
Q 002687 885 AHETGLQ 891 (892)
Q Consensus 885 ~~~~~~~ 891 (892)
++.+..+
T Consensus 841 ~il~~~~ 847 (937)
T COG1025 841 QILQPPQ 847 (937)
T ss_pred HHHccCC
Confidence 9887554
No 4
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-58 Score=513.71 Aligned_cols=809 Identities=17% Similarity=0.178 Sum_probs=570.4
Q ss_pred ccCCCCCCcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChh-hHHHHHHHc
Q 002687 30 ELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH-DIIKFLESI 108 (892)
Q Consensus 30 ~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~-~l~~~l~~~ 108 (892)
+.+.|.+.++..+|+|||+++++.++.+. ..+..+.|++||..||.+.+|+|||+|||+|.||+|||.. ++..++.+.
T Consensus 20 k~~~d~r~yr~~~L~Ngl~alLisDp~tD-~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~ 98 (974)
T KOG0959|consen 20 KSLGDTREYRGIELTNGLRALLISDPKTD-KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKN 98 (974)
T ss_pred cCCCCccceeEEEecCCceEEEecCCCCC-ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhc
Confidence 34556667999999999999999998654 5788999999999999999999999999999999999975 677777665
Q ss_pred cCccCCCccccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 002687 109 GAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVL 188 (892)
Q Consensus 109 g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~~~~~~~~~~~~ 188 (892)
||+.||+|+.++|+|++.+.. ++++.+|+.+++.+.+|.|.++.++||+.+|.+|.+++.++..+....+.+.
T Consensus 99 ----gGssNA~T~~e~T~y~F~V~~---~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~ 171 (974)
T KOG0959|consen 99 ----GGSSNAYTDSEHTNYYFDVQH---DHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRS 171 (974)
T ss_pred ----CCccccccccccceEEEecch---HHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHH
Confidence 566799999999999999964 4599999999999999999999999999999999999987776665556665
Q ss_pred H-ccCCCCCCCCCCCCHHHhcCCC-----HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCC
Q 002687 189 M-MEGSKYAECLPIGLEKVIRTVS-----SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVI 262 (892)
Q Consensus 189 l-~~~~~~~~~~~~g~~~~i~~~t-----~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~ 262 (892)
+ -++|||+ ++++|+.++|.... ++.|+.||++||++++|++||+|+. +.+.+..++.+.|+.++....+.
T Consensus 172 l~~~~hp~~-kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~e-slD~Le~lv~~~F~~i~N~~~~~-- 247 (974)
T KOG0959|consen 172 LSNPGHPYS-KFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKE-SLDVLESLVTRLFDEISNKKKPR-- 247 (974)
T ss_pred hcCCCCcch-hccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCC-ChhHHHHHHHHHcccccccCCCC--
Confidence 5 5799999 99999999999999 9999999999999999999999999 99999999999999998865544
Q ss_pred CCCCCCCC--CCCceEEeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeccc
Q 002687 263 PKFPVPSH--QEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASA 340 (892)
Q Consensus 263 ~~~~~~~~--~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~~~~ 340 (892)
|.++.++. ...+..+.+.+......+.|.|+.|+.. ...+.-+.+++..++|....+.|...|+ +.||+.+..++.
T Consensus 248 p~f~~~p~~~e~~~~~~~v~pik~~~~l~is~~~p~~~-~~y~~kP~~y~~hLigheg~GSL~~~Lk-~~gw~~sl~a~~ 325 (974)
T KOG0959|consen 248 PVFPEPPFLPEELKKLVRVVPIKDGRSLMISWPVPPLN-HHYKSKPLRYLSHLIGHEGPGSLLSYLK-RLGWATSLEAGI 325 (974)
T ss_pred CcccCCCCChHHhCcEEEEEeccccceEEEEEecCCcc-cccccCcHHHHHHHhccCCcchHHHHHH-HhhchheeecCC
Confidence 33333311 1233445566667789999999999753 2334444567778888755566777777 579999888887
Q ss_pred CcccccccEEEEEEEecC---CcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHH
Q 002687 341 DDLVRPLKAYIMSSSCKE---RGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQ 417 (892)
Q Consensus 341 ~~~~~~~~~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (892)
.....+.+.|.|.+..+. +++++++..++..|+.++..|..++-+++....-...+ .|.+. ..+...+..+..
T Consensus 326 ~~~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~F--rf~~k--~~p~~~~~~~~~ 401 (974)
T KOG0959|consen 326 PEFASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKF--RFQDK--EPPMEYASEIAS 401 (974)
T ss_pred CccccccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhhe--eeccc--CCcHHHHHHHHh
Confidence 766678899999988765 45679999999999999999998888877665433332 34333 355666666666
Q ss_pred HhhcCCCcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEeCCCCC-------------CCHHHHHHHHHHHH
Q 002687 418 HFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTF-------------STIDDLKNIVLKIK 484 (892)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~~p~~~-------------~~~~~~~~~~~~~~ 484 (892)
.+.+-.+ ... -.-...+....++.|+.+.. .+.+.++.++++..... ...+++...+.+.+
T Consensus 402 nlq~~P~---~~i--l~~~~ll~~~~p~~i~~~~~-~L~p~n~~v~~~s~~~~~~~d~~E~~ygt~y~~e~i~~~~~~~~ 475 (974)
T KOG0959|consen 402 NLQYYPV---EDV--LTGSYLLTEFDPDLIQEVLS-SLVPSNMRVILVSRSFEGKTDKAEPWYGTAYKVEDIPAEIIKEW 475 (974)
T ss_pred hcccCCh---HHh--hcchhhhhhcChHHHHHHHH-hcCcccceeeeeeeccccccccccceeccccccccCCHHHHHHh
Confidence 5542211 010 01112367788888888875 46777766665543221 11233332222222
Q ss_pred hhhccCCCCCCccCCccccccCCCCC-CceeeeEEecCCCeEEEEecCCcEEEEeeCCC-CCCeEEEEE--EecCcCCCC
Q 002687 485 NLEEKNISPWDEENIPEEIVSTKPSP-GNIVQQFEYENLGATELVLSNGMRVCYKCTDF-LDDQVLFTG--FSYGGLSEL 560 (892)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~L~NG~~v~~~~~~~-~~~~v~~~~--~~~gg~~~~ 560 (892)
...... .+...+...+.++...... .++ ...+.| .-+.-....++|+++++. ..+..++.+ ..++. ...
T Consensus 476 ~~~~~~-~~l~lP~~nefI~t~f~~~~~~~-~~~~~P----~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~-~~~ 548 (974)
T KOG0959|consen 476 ENSHLN-PELHLPTPNEFIPTDFSILPAPI-PKLEYP----VLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGA-TQS 548 (974)
T ss_pred hccCcc-ccccCCCCCcccccccccccccC-ccccCC----eeeecCCcceeEEecccccccchhheeeeecCccc-ccC
Confidence 111100 1111111111121111110 011 111112 333444568999998752 223444444 33333 334
Q ss_pred CcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHH
Q 002687 561 PESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEE 640 (892)
Q Consensus 561 ~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~ 640 (892)
+....++.++..++. ..+.+..+.... .|.++..+.+..+..+++.+.+++++.+++.+.+.+.+- -++++.
T Consensus 549 ~~~~~l~~l~~~~l~-----d~l~E~~Y~A~~--aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f-~~~~~r 620 (974)
T KOG0959|consen 549 PLNSVLSTLYVRLLK-----DQLNEYLYPALL--AGLTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANF-ELDEDR 620 (974)
T ss_pred HHHHHHHHHHHHHHH-----HHHhHHHHHHHh--ccceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhc-cccHHH
Confidence 555566655544443 234444444444 455556666666677777789999999999999977763 359999
Q ss_pred HHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCCChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccc
Q 002687 641 VEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSN 720 (892)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~ 720 (892)
|+..++.+..++++...+.....+.....+++.+..+......+.++.++++++..|... +..+..++.+|+||++.++
T Consensus 621 f~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~~~e~~~al~~~~le~~~~F~~~-~~~~~~~e~~i~GN~te~~ 699 (974)
T KOG0959|consen 621 FEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWSKEELLEALDDVTLEDLESFISE-FLQPFHLELLIHGNLTEKE 699 (974)
T ss_pred HHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccchHHHHHHhhcccHHHHHHHHHH-HhhhhheEEEEecCcchHH
Confidence 999999999999996554444455555666767777766656788888999999999998 5578999999999999999
Q ss_pred cHHHHHHhhccCCCCC-CCCCccCcCCCCCCCccCCCcceeeEEeCCC-CCcceEEEEEEeccCCCCcchHHHHHHHHHH
Q 002687 721 GIPLILQYLGGIPKPP-EPILHFNRDNLKGLPFTFPSSIIREVVRSPM-VEAQCSVQLCFPVELKNGTMVEEINYVGFLS 798 (892)
Q Consensus 721 ~~~~i~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~ 798 (892)
+.++++...+.+.... .+.+..++...+...+.+|.+.......... ..+.+++.+.+++...+ ........+++
T Consensus 700 A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~~~ns~i~~~~Q~~~~~---~~~~~~~~L~~ 776 (974)
T KOG0959|consen 700 ALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKTDDNSCIEVYYQIGVQD---TRDNAVLGLLE 776 (974)
T ss_pred HHHHHHHHHhhhhccCCCCccccccccCcccceeccCCceEEEEcccccCCCCceEEEEEEcccch---hHHHHHHHHHH
Confidence 9998877777772211 1111111223444556778776654444412 34677888888863322 33455678899
Q ss_pred HHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCcce-eEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHH
Q 002687 799 KLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRG-DISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVST 877 (892)
Q Consensus 799 ~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g-~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ 877 (892)
.++...+|+.||++..++|-+++...... | ..| .+.++....++.++..|+.+.+.+.+... .+++++++.
T Consensus 777 ~li~ep~Fd~LRTkeqLGYiv~~~~r~~~------G-~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i~-~m~~e~Fe~ 848 (974)
T KOG0959|consen 777 QLIKEPAFDQLRTKEQLGYIVSTGVRLNY------G-TVGLQITVQSEKSVDYLEERIESFLETFLEEIV-EMSDEEFEK 848 (974)
T ss_pred HHhccchHHhhhhHHhhCeEeeeeeeeec------C-cceeEEEEccCCCchHHHHHHHHHHHHHHHHHH-hcchhhhhh
Confidence 99999999999999999999998887643 1 122 23333335677888888888888888777 499999999
Q ss_pred HHHHHHHhhhhh
Q 002687 878 ILELEQRAHETG 889 (892)
Q Consensus 878 ak~~~~~~~~~~ 889 (892)
-+..++....+.
T Consensus 849 ~~~~lI~~~~ek 860 (974)
T KOG0959|consen 849 HKSGLIASKLEK 860 (974)
T ss_pred hHHHHHHHHhhc
Confidence 999999877664
No 5
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=1.9e-56 Score=488.32 Aligned_cols=792 Identities=16% Similarity=0.163 Sum_probs=549.6
Q ss_pred cEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCcc
Q 002687 38 VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQN 117 (892)
Q Consensus 38 ~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~n 117 (892)
+...+-++|++++.+.+++|.++ +.++| ..+|.+..|+||.|||++|+||+|||-++. ++...+.++++++|
T Consensus 22 ~~~~H~~TGa~l~hi~~~d~~~v--Fsi~F----~T~p~dstGVaHiLEHtvlcGS~kYPvkdP--F~~ml~rSLntF~N 93 (978)
T COG1026 22 YILEHEKTGAELAHIKNEDPNNV--FSIAF----KTEPHDSTGVAHILEHTVLCGSKKYPVKDP--FFKMLKRSLNTFLN 93 (978)
T ss_pred EEEeeccCCceEEEecCCCcCce--EEEEe----ecCCCCCCCcchHHHHHhhhCCCCCCCCCh--HHHHHHHhHHHHHh
Confidence 56667789999999998877644 45555 568889999999999999999999999885 45555667788899
Q ss_pred ccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHH--------------HHHHHHHHhcCCCcc-cchH
Q 002687 118 AVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKE--------------RGAVLEEYRGNRNAS-GRMQ 182 (892)
Q Consensus 118 a~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~e--------------r~~v~~e~~~~~~~~-~~~~ 182 (892)
|+|..|+|+|.++... ++++-+++.++.|.+++|.+.++.|..| +|||.+||++...++ ..++
T Consensus 94 A~T~~D~T~YP~sS~~--~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~ 171 (978)
T COG1026 94 AFTFPDKTVYPASSAN--EKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLS 171 (978)
T ss_pred hccCCCcceeeccccC--cchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHH
Confidence 9999999999998775 5679999999999999999999998776 799999999987664 5679
Q ss_pred HHHHHHHccCCCCCCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhh-hCCCCCCCCCCC
Q 002687 183 DAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTH-FGQKKSATDPPV 261 (892)
Q Consensus 183 ~~~~~~l~~~~~~~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~-f~~~~~~~~~~~ 261 (892)
+.+.+++|++..|+ ..++|.+..|..+|.|++++||+++|+|+|+.++++||+ ++++.++.|++. +...++.....+
T Consensus 172 ~~~~~slfp~~ty~-~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni-~~~~~L~~iee~~l~~~~k~~~~~~ 249 (978)
T COG1026 172 RAMQQSLFPGTTYG-VNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNI-PTERLLDFIEEKVLRPFGKRELDVP 249 (978)
T ss_pred HHHHHhhCCCcccc-ccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCC-CHHHHHHHHHHhhhccccccccCCC
Confidence 99999999999999 899999999999999999999999999999999999999 999999999887 666554332222
Q ss_pred CCCCCCCCCCCCceEEe------ecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCe-e
Q 002687 262 IPKFPVPSHQEPRFSCF------IESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPY-F 334 (892)
Q Consensus 262 ~~~~~~~~~~~~~~~~~------~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~-~ 334 (892)
.+.... ...++.... ...+..+..+.++|..++. .+..+.+++.+|..+|.+.-.+.|.+.+.+. |+. .
T Consensus 250 i~~~~~--~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~~-~d~~~~lal~vL~~iLl~~~asPl~~~lies-glg~~ 325 (978)
T COG1026 250 IPDQKA--FKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSA-SDAEDSLALEVLEEILLDSAASPLTQALIES-GLGFA 325 (978)
T ss_pred CCcccc--cCcccccceeeccCCCCCCCceeEEEEEEecCCc-ccHHHHHHHHHHHHHHccCcccHHHHHHHHc-CCCcc
Confidence 221111 111111111 1224568999999999865 3567889999999999999999999999865 444 3
Q ss_pred eeecccCcccccccEEEEEEE-ecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHH
Q 002687 335 SCSASADDLVRPLKAYIMSSS-CKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRD 413 (892)
Q Consensus 335 ~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~ 413 (892)
.++..+.+. .....|.+.+. +..++.++..+.|+++|+.+.++|++.+.++.+++++..++... .....+..++.
T Consensus 326 ~~~g~~~~~-~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~---~s~pfgl~l~~ 401 (978)
T COG1026 326 DVSGSYDSD-LKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV---KSYPFGLGLMF 401 (978)
T ss_pred cccceeccc-cceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh---cCCCccHHHHH
Confidence 333323333 33456666655 56688888888999999999999999999999999998876542 34456667777
Q ss_pred HHHHHhhcC-CCcCCHHHHHHHHHHHcCC-CCHHH-HHHHHHHHhccCC-eEEEEeCCCCC-------------------
Q 002687 414 ECLQHFLCK-EPIIGIEYEARLQKTLLPH-ISALE-VSRYSEKLQTSCS-CVIKTIEPQTF------------------- 470 (892)
Q Consensus 414 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-vt~~~-i~~~~~~~l~~~~-~~~~~~~p~~~------------------- 470 (892)
..+..|.+| ++..+..... .+ +.|++ +.... +++++++||..++ .+++++.|+..
T Consensus 402 ~~~~gw~~G~dp~~~Lr~~~-~~-~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e~L~~~~~~ 479 (978)
T COG1026 402 RSLYGWLNGGDPEDSLRFLD-YL-QNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQKRSSE 479 (978)
T ss_pred HhccccccCCChhhhhhhHH-HH-HHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHHHHHHHHhh
Confidence 777788887 4444433322 22 23333 33333 8999999998766 88888899764
Q ss_pred CCHHHHHHHHHHHHhhhccCCCCCCccCCccccccCCCCC--CceeeeEEecCCCeEEEEecCCcEEEEeeCCCCCCeEE
Q 002687 471 STIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSP--GNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVL 548 (892)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~L~NG~~v~~~~~~~~~~~v~ 548 (892)
++.+++++..++.+.. +..+..+.++......|.- +++.... ++. ..+..-.|..+|++++-.+ ++.++
T Consensus 480 l~de~~~ki~~~~~~l-----ke~Q~~~dse~~~~~lP~l~~~dvp~~~--~k~-~l~~~~~~~~~v~~~~~~t-n~i~y 550 (978)
T COG1026 480 LTDEDLEKIIKDSKKL-----KERQDQPDSEEDLATLPTLKLGDVPDPI--EKT-SLETEVSNEAKVLHHDLFT-NGITY 550 (978)
T ss_pred cCHHHHHHHHHHHHHH-----HHhhcCCCchhhhhhccccchhcCCCcc--ccc-ceeeeccCCcceEEeecCC-CCeEE
Confidence 3344444444333322 2222222223322222221 2221111 111 1233456778888876544 66899
Q ss_pred EEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecc-----------eeEEEEEecChh
Q 002687 549 FTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGA-----------YMRTFSGDCSPS 617 (892)
Q Consensus 549 ~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~-----------~~~~~~~~~~~~ 617 (892)
+++++..+.-....-.++. ++..++.++||.+++..++...+....++++++.+. ..+.+++.+..+
T Consensus 551 l~~~~~~~~l~~~llpyL~--L~~~~l~~lgt~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~ 628 (978)
T COG1026 551 LRLYFDLDMLPSELLPYLP--LFAFALTNLGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRS 628 (978)
T ss_pred EEEEeecCCCChhhhhhHH--HHHHHHHhcCCCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhh
Confidence 9999976543333334444 445556669999999999998888776655554432 358899999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcC-hHHHHHHHHHHHhcCCCCCCCC---C-ChhhhhcC---
Q 002687 618 DLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERD-PYTAFANRVKEINYGNSYFFRP---I-RISDLQKV--- 689 (892)
Q Consensus 618 ~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-~~~~l~~l--- 689 (892)
+.+.+++++.+++.++.|.|.++++...++.++.+.+...+ +...+.......++....+... + ..+-|..+
T Consensus 629 k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~ 708 (978)
T COG1026 629 KVEKLFELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSN 708 (978)
T ss_pred hhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHh
Confidence 99999999999999998988999999999999988887766 4444444444433322211110 0 12222222
Q ss_pred -----C---hHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcc-ee
Q 002687 690 -----D---PLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSI-IR 760 (892)
Q Consensus 690 -----~---~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 760 (892)
. .+.|+..+++.+ ..+|+.|+|.|+.+ .+.+.+++.|-.+...-.+.... ..++.+. ...... ..
T Consensus 709 ~~~~~~~ei~~kL~~l~~~i~-~~~n~~i~i~~~~~--~~~~~~e~~l~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~ 782 (978)
T COG1026 709 FEENFEKEIADKLQALRKKIF-QTNNLRIAIIGDID--KILDLLENPLLKFLEHLLPGFEL-PTPPKNP--HLDLISSLS 782 (978)
T ss_pred hcccccHHHHHHHHHHHHHHh-hcCceEEEEecChh--hhHHHHHHHhhhhhcccCccccc-CCCCCCc--chhhhcccc
Confidence 1 456777788766 45888899999864 44444544444433210111000 0111111 111111 12
Q ss_pred eEEeCCCCCcceEEEEEEec---cCCCCcchHHHHHHHHHHHHH-HHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCc
Q 002687 761 EVVRSPMVEAQCSVQLCFPV---ELKNGTMVEEINYVGFLSKLL-ETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDV 836 (892)
Q Consensus 761 ~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~L~~~l-~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~ 836 (892)
.....+ .+.+...++|+. +..+++... +.+|..++ ...|+..||+ .|+|||++++... .
T Consensus 783 ~~~ii~--~p~a~~~l~fs~~~~~y~hpd~~~----l~vls~~L~~~~lw~~IR~-~GGAYGa~as~~~----------~ 845 (978)
T COG1026 783 EATIIP--SPVAYNALAFSIGGLPYTHPDYAA----LQVLSEYLGSGYLWNKIRE-KGGAYGASASIDA----------N 845 (978)
T ss_pred ceEEec--cHHHHHHHhhhccCCCCCCccchH----HHHHHHHhccchhHHHHHh-hcccccccccccc----------C
Confidence 222222 233444455543 455565554 45555555 5789999997 5999999988764 4
Q ss_pred ceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 002687 837 RGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAH 886 (892)
Q Consensus 837 ~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~ 886 (892)
.|.|.+..+++|+ +-++++.+++.++.+..+.++++++++++...++.+
T Consensus 846 ~G~f~f~sYRDPn-~~kt~~v~~~~v~~l~s~~~~~~d~~~~ilg~i~~~ 894 (978)
T COG1026 846 RGVFSFASYRDPN-ILKTYKVFRKSVKDLASGNFDERDLEEAILGIISTL 894 (978)
T ss_pred CCeEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhccc
Confidence 6899999999996 556799999999999998999999999999887754
No 6
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-54 Score=440.91 Aligned_cols=812 Identities=16% Similarity=0.150 Sum_probs=567.2
Q ss_pred hhhccCcceeeeeecccccccCCCCCCcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhcc
Q 002687 11 IAKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAF 90 (892)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~ 90 (892)
..+.+||.-+....++ + +.+ .-+...+=+.|.+|+.+.+.++.++.+ +.| +..|++..||.|+|||...
T Consensus 32 G~~~hgfevv~~~~Vp--E-l~l--~av~lkH~~Tgae~lhl~reD~N~vFs--I~F----rTpp~dstGiPHILEHtvL 100 (998)
T KOG2019|consen 32 GDKKHGFEVVSEEFVP--E-LKL--TAVLLKHKKTGAEVLHLDREDENNVFS--IVF----RTPPKDSTGIPHILEHTVL 100 (998)
T ss_pred CccccceEEeeeeech--h-hhh--hheeeeecCCCceeEeeccCCCCceeE--EEe----ecCCCccCCCchhhhhhee
Confidence 4678888887777663 1 211 126677788999999998887765533 444 6678888999999999999
Q ss_pred CCCCCCChhhHHHHHHHccCccCCCccccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHH-------
Q 002687 91 SATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKE------- 163 (892)
Q Consensus 91 ~gt~~~~~~~l~~~l~~~g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~e------- 163 (892)
+||.|||-++ .+++.+..++.+++||+|..|+|.|.+...+ ++++.++.+++.|..+.|.+.+.+|..|
T Consensus 101 CGS~KYPvrd--PFfkmLnrSLatFmNAfT~pD~T~yPfattN--~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~ 176 (998)
T KOG2019|consen 101 CGSRKYPVRD--PFFKMLNRSLATFMNAFTAPDYTFYPFATTN--TKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHN 176 (998)
T ss_pred eccCcCcccC--hHHHHHHHHHHHHHhhccCCCcceeecccCC--hHHHHHHHHHhhhcccchHHHhhhhhhhcceeecC
Confidence 9999999886 2444445556677999999999999998774 7789999999999999999988888776
Q ss_pred -----------HHHHHHHHhcCCCcccc-hHHHHHHHHccCCCCCCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEE
Q 002687 164 -----------RGAVLEEYRGNRNASGR-MQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVI 231 (892)
Q Consensus 164 -----------r~~v~~e~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~ 231 (892)
|++|.+||++.-+++.+ ++..+.+++++++.|+ -.++|++-.|..++.+++++||++||||+|+.++
T Consensus 177 dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYg-v~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~ 255 (998)
T KOG2019|consen 177 DPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYG-VNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIF 255 (998)
T ss_pred CCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCcccccc-ccCCCCcccCccccHHHHHHHHHhccCCCcceeE
Confidence 89999999988666554 5777788999999999 7899999999999999999999999999999999
Q ss_pred EEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCceEEee------cCCCCceEEEEEEecCCCcCCCHHHH
Q 002687 232 AVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI------ESEAGGSAVIVSYKMPVNELKTIKDY 305 (892)
Q Consensus 232 i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~l~~~~p~~~~~~~~~~ 305 (892)
.+||+ ..+..+..++..|....+........ +..+ ..+++.++.. +.+..|....+.|..+. +.+..+.+
T Consensus 256 tYGn~-Pl~~~l~~l~e~~~~~sk~~~s~kv~-~qk~-f~kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~-p~d~~etf 331 (998)
T KOG2019|consen 256 TYGNF-PLEDLLKQLEEDFSPFSKRELSSKVT-FQKL-FDKPRRVVEKGPADPGDLPKKQTKCSNSFLSND-PLDTYETF 331 (998)
T ss_pred eecCc-hHHHHHHHHHHhhcccccccccCccc-cccc-cccCceeeeecCCCCCCCccceeEEEEEeecCC-chhHHHHH
Confidence 99999 99999999998887664432221111 1111 1222222221 23456788888887764 45678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-CCeeeeecccCcccccccEEEEEEE-ecCCcHHHHHHHHHHHHHHHHHcCCCHH
Q 002687 306 KEMLTESMFLHALNQRFFKLSRRKD-PPYFSCSASADDLVRPLKAYIMSSS-CKERGTLKALESMLIEVARVRLHGFSER 383 (892)
Q Consensus 306 ~~~~l~~il~~~~~srL~~~lr~~~-~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~i~~~l~~l~~~g~~~~ 383 (892)
++.+|..++.++.+|.+|+.|.|.. |.-+++.+++.+. -..+.|.|... +..++++.+.+.|..+++.+.+.||+.+
T Consensus 332 aL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~~-t~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~d 410 (998)
T KOG2019|consen 332 ALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYEDT-TLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDND 410 (998)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCcc-cccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 9999999999999999999998764 3346777777755 44578888876 4567888898999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhcC-CCcCCHH--HHHHHHHHHcCCCCHHHHHHHHHHHhccCC-
Q 002687 384 EVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCK-EPIIGIE--YEARLQKTLLPHISALEVSRYSEKLQTSCS- 459 (892)
Q Consensus 384 el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~- 459 (892)
.++...+++.-++ ..+....+-.++..++..|.++ +|..... ...+.++..+..-+..-++..+++|+.+++
T Consensus 411 rieAil~qiEisl----k~qst~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h 486 (998)
T KOG2019|consen 411 RIEAILHQIEISL----KHQSTGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPH 486 (998)
T ss_pred HHHHHHHHhhhhh----hccccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCc
Confidence 9999888887664 4455556677888888888886 5544333 223444555665567778999999998765
Q ss_pred eEEEEeCCCCC-------------------CCHHHHHHHHHHHHhhhccCCCCCCccCCccccccCCCCCCceeeeEEec
Q 002687 460 CVIKTIEPQTF-------------------STIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYE 520 (892)
Q Consensus 460 ~~~~~~~p~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 520 (892)
+++..+.|+.. .+++|++++.++......+.-+|....++|.--+.++|..+.
T Consensus 487 ~~t~smqpd~e~~~~~~~eE~tkL~ek~~alteeD~~ei~k~~~eL~~kQ~tp~dlsClPtL~vsDIp~~~~-------- 558 (998)
T KOG2019|consen 487 CFTFSMQPDPEFAEKLEQEEATKLEEKKAALTEEDLAEIAKAGEELREKQSTPEDLSCLPTLNVSDIPKTIP-------- 558 (998)
T ss_pred eEEEEecCCchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCC--------
Confidence 77788888764 233343333322211111111222222233322223333221
Q ss_pred CCCeEEEEecCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcc--hhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEE
Q 002687 521 NLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPES--EYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVE 598 (892)
Q Consensus 521 ~~~~~~~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~--~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~ 598 (892)
....++..-||++|......+ ++++|+++++. +...|.+ .++..+ +..+.++||+..+..++++.+..++++
T Consensus 559 -~~~~~v~dingvkv~~~dl~t-ngi~Y~r~~~~--l~~~p~eL~PylPlf--c~sll~lGt~~lsf~el~qqI~rkTGG 632 (998)
T KOG2019|consen 559 -YTKLEVGDINGVKVQRCDLFT-NGITYTRVVFD--LNSLPEELLPYLPLF--CQSLLNLGTGDLSFVELEQQIGRKTGG 632 (998)
T ss_pred -ccceeeeeccCceeEEeeccC-CceEEEEEeec--cccCcHHhhcchHHH--HHHHHhcCCCcccHHHHHHHhhhhcCc
Confidence 123456778999998886544 66899999885 3345654 445533 333334999999999999999998776
Q ss_pred EEEeec--c--------eeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHH
Q 002687 599 GGTKVG--A--------YMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVK 668 (892)
Q Consensus 599 ~~~~~~--~--------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (892)
++++.. . ....+++.++..+++.+|++++.++.++.|.+++.|+....+..+++.+...+.+..+...-.
T Consensus 633 iS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~~n~i~dsGH~~A~~rs 712 (998)
T KOG2019|consen 633 ISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRMTNGIADSGHGFAAARS 712 (998)
T ss_pred eeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHhhccCCcccchhHhhhh
Confidence 665542 1 135677778999999999999999999999999999999999999888877776665554433
Q ss_pred HHhcCCCCCCCCC-----Ch---h--------hhhcCChHHHHHHHhhhhCCCCCcEEEEEecC-CccccHHHHHHhhcc
Q 002687 669 EINYGNSYFFRPI-----RI---S--------DLQKVDPLKACDYFNSCFKDPSTFTVVIVGNI-DPSNGIPLILQYLGG 731 (892)
Q Consensus 669 ~~~~~~~~~~~~~-----~~---~--------~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~-~~~~~~~~i~~~~~~ 731 (892)
...+....+.... .. . +++.| .+.|.+.-+ .+.+-++|.+.|..|= ....+.+.+++++.+
T Consensus 713 ~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i-~~kL~eIrk-~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~ 790 (998)
T KOG2019|consen 713 AAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPI-VSKLTEIRK-SLLNTNGMIVNITADPKQLTNVEKAVEKFLDS 790 (998)
T ss_pred hcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHH-HHHHHHHHH-HHhcCCCeEEEEecCcccchhHHHHHHHHHHh
Confidence 3333221111000 11 1 12222 223333333 3556689999997763 356789999999999
Q ss_pred CCCCCCCCCccCcCCCCCCCccCCCcceeeEEeCCCCCcceEEEEEEe-ccCCCCcchHHHHHHHHHHHHH-HHHHHHHH
Q 002687 732 IPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFP-VELKNGTMVEEINYVGFLSKLL-ETKMMQVL 809 (892)
Q Consensus 732 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~L~~~l-~s~L~~~l 809 (892)
+|...+... ...+.+ ..|.......+..+.. +..++.-+.. .+..+++. ..++||+..+ +..|+.++
T Consensus 791 lp~e~p~g~---~st~d~---r~p~~~~~i~~~~P~f-qvnyvgka~~~vpyt~~d~----asl~vlS~~lt~k~Lh~ev 859 (998)
T KOG2019|consen 791 LPRENPSGS---KSTWDA---RLPLRSEAIRVVIPTF-QVNYVGKAGLGVPYTHPDG----ASLQVLSKLLTNKWLHDEV 859 (998)
T ss_pred ccccCCCCC---ccCccc---cCCCCceeEEEecccc-chhhhhhhcccccCCCCCC----cHHHHHHHHHHHHHHHHHH
Confidence 984222110 011211 2333222221222210 0111111111 13444443 2467787766 57899999
Q ss_pred hhhcCCeeeeeEEeeccCCCCCCCCCcceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 002687 810 RFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAH 886 (892)
Q Consensus 810 Re~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~ 886 (892)
||+ |++|+.++.+.. ..|.|+++.+.||+-++ .++.+...-+.++...++.++|++||...+++.
T Consensus 860 Rek-GGAYGgg~s~~s----------h~GvfSf~SYRDpn~lk-tL~~f~~tgd~~~~~~~~~~dldeAkl~~f~~V 924 (998)
T KOG2019|consen 860 REK-GGAYGGGCSYSS----------HSGVFSFYSYRDPNPLK-TLDIFDGTGDFLRGLDVDQQDLDEAKLGTFGDV 924 (998)
T ss_pred HHh-cCccCCcccccc----------ccceEEEEeccCCchhh-HHHhhcchhhhhhcCCccccchhhhhhhhcccc
Confidence 985 889999888653 57899999999998655 599999999999988899999999999888764
No 7
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-52 Score=402.76 Aligned_cols=406 Identities=19% Similarity=0.248 Sum_probs=344.6
Q ss_pred CcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCc
Q 002687 37 GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (892)
Q Consensus 37 ~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~ 116 (892)
+.+..+|+||++|....+..+ .+++++||.+||++|++.++|.|||||||+|+||++.+...+...++..|+- +
T Consensus 33 ~t~vttL~NGlrVaTE~~~a~--TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGah----L 106 (467)
T KOG0960|consen 33 ETEVTTLPNGLRVATEHNSAS--TATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAH----L 106 (467)
T ss_pred cceEEEcCCCcEEEeccCCCc--ceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH----h
Confidence 478999999999999888443 5899999999999999999999999999999999999999999999998754 5
Q ss_pred cccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCc-ccchHHHHHHHHccCCCC
Q 002687 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNA-SGRMQDAHWVLMMEGSKY 195 (892)
Q Consensus 117 na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~-~~~~~~~~~~~l~~~~~~ 195 (892)
||||++|+|+|++.+.+++ ++.++++|+|++.+..+.+.++|+||++|+.|++..+.+ +..+.+.++...|.|+|.
T Consensus 107 NAytSReqT~yyakal~~d---v~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL 183 (467)
T KOG0960|consen 107 NAYTSREQTVYYAKALSKD---VPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPL 183 (467)
T ss_pred cccccccceeeehhhcccc---chHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcc
Confidence 9999999999999999766 999999999999999999999999999999999987665 556799999999999999
Q ss_pred CCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCce
Q 002687 196 AECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275 (892)
Q Consensus 196 ~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (892)
+ +...|+.+.|++|+.+||++|.++||.+++|+|..+|.| +++++.+++++|||.++....+...+..+++.+ ....
T Consensus 184 ~-~tilGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV-~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~F-tgsE 260 (467)
T KOG0960|consen 184 G-RTILGPSENIKSISRADLKDYINTHYKASRMVLAAAGGV-KHEELVKLAEKYFGDLSKLQTGDKVPLVPPARF-TGSE 260 (467)
T ss_pred c-ccccChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCc-CHHHHHHHHHHHcCCCcccccCcCCCCCCCccc-cCce
Confidence 9 899999999999999999999999999999999999999 999999999999999876333332333223323 3344
Q ss_pred EEeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHH---------HHHHHHHHHhccCCCCeeeeecccCccccc
Q 002687 276 SCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH---------ALNQRFFKLSRRKDPPYFSCSASADDLVRP 346 (892)
Q Consensus 276 ~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~---------~~~srL~~~lr~~~~~~~~~~~~~~~~~~~ 346 (892)
+.+.++..+.+++.|+.... ++.+||++++.+.+.++|. ..+|+|.+.+.+. .++.+.-++.. .|.+
T Consensus 261 vR~rdd~lP~a~~AiAVEG~--~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFnt-~YkD 336 (467)
T KOG0960|consen 261 VRVRDDDLPLAHIAIAVEGV--SWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFNT-SYKD 336 (467)
T ss_pred eeecCCCCchhheeeeEecC--CcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhhc-cccc
Confidence 45667788889999888764 4789999999999999995 3468898888765 55665555444 3589
Q ss_pred ccEEEEEEEe-cCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhc-CCC
Q 002687 347 LKAYIMSSSC-KERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLC-KEP 424 (892)
Q Consensus 347 ~~~~~i~~~~-~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 424 (892)
+|+|.+++.+ .+..++..+..+.+++.+|+. -+|+.|+++||++++.++...+... ..++.++...+++ |..
T Consensus 337 TGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ldgt-----tpi~ediGrqlL~~Grr 410 (467)
T KOG0960|consen 337 TGLWGIYFVTDNLTMIDDLIHSVLKEWMRLAT-SVTEAEVERAKNQLKTNLLLSLDGT-----TPIAEDIGRQLLTYGRR 410 (467)
T ss_pred ccceeEEEEecChhhHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCC-----CchHHHHHHHHhhcCCc
Confidence 9999999999 778899999999999999987 6999999999999999997766432 2457777776654 665
Q ss_pred cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEeCCCC
Q 002687 425 IIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQT 469 (892)
Q Consensus 425 ~~~~~~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~~p~~ 469 (892)
+...+.+ ..|++||.++|++++.+|+-.....++.++|-.
T Consensus 411 i~l~El~-----~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie 450 (467)
T KOG0960|consen 411 IPLAELE-----ARIDAVTAKDVREVASKYIYDKDIAIAAVGPIE 450 (467)
T ss_pred CChHHHH-----HHHhhccHHHHHHHHHHHhhcCCcceeeecccc
Confidence 5544332 459999999999999999999888888888754
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=2.3e-52 Score=460.65 Aligned_cols=410 Identities=25% Similarity=0.349 Sum_probs=336.5
Q ss_pred CcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCc
Q 002687 37 GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (892)
Q Consensus 37 ~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~ 116 (892)
+++.++|+||+++++.+++. ...++++++|++|+++|+.++.|+|||+|||+|+||++++..++.+.++.+|+. .
T Consensus 16 ~~~~~~L~nGl~~~~~~~~~-~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~----~ 90 (438)
T COG0612 16 GLQVFTLPNGLRVITYPNPT-APTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQ----L 90 (438)
T ss_pred cceEEEcCCCCEEEEEeCCC-CCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCe----e
Confidence 38999999999999999885 336999999999999999999999999999999999999988999999999755 5
Q ss_pred cccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCccc-chHHHHHHHHccCCCC
Q 002687 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASG-RMQDAHWVLMMEGSKY 195 (892)
Q Consensus 117 na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~~~-~~~~~~~~~l~~~~~~ 195 (892)
||+|++|+|+|++++.. ++++.+|++++|++.+|.|++++|++||++|++|++++.+++. .+...+...+|++|||
T Consensus 91 na~ts~d~t~y~~~~l~---~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~ 167 (438)
T COG0612 91 NAFTSFDYTVYYLSVLP---DNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPL 167 (438)
T ss_pred eccccchhhhhhhhhch---hhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCC
Confidence 99999999999999554 4499999999999999999999999999999999999977655 5688889999999999
Q ss_pred CCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCce
Q 002687 196 AECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275 (892)
Q Consensus 196 ~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (892)
+ ++++|+.++|.++|.++|++||++||+|+||+|+||||| +++++.++++++|+.|+....+...+ ..+.....+.
T Consensus 168 ~-~~~~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi-~~~~v~~~~~~~f~~~~~~~~~~~~~--~~~~~~~~~~ 243 (438)
T COG0612 168 G-RPILGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDV-DAEEVVELIEKYFGDLPGAAPPPKIP--PEPPLGPERV 243 (438)
T ss_pred C-CCCCCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCC-CHHHHHHHHHHHHccCCccCCCCCCC--CccccCCCce
Confidence 9 999999999999999999999999999999999999999 99999999999999998722222222 1122222333
Q ss_pred EEee---cCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeecccCcccccccEEEE
Q 002687 276 SCFI---ESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIM 352 (892)
Q Consensus 276 ~~~~---~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~~~~~~~~~~~~~~~i 352 (892)
.... .+...++.+.++++.|... ...+++++.+++.++|+++.|||++.+|+++|++|+++++.... .+.+.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~-~~~~~~~~ 321 (438)
T COG0612 244 VRVNDPEQPDLEQAWLALGYPGPDYD-SPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFL-SDSGLFSI 321 (438)
T ss_pred EEecCCCCchhhhhhhhccccCcCcC-cchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccc-cccCCceE
Confidence 2222 2345566777777665432 11367888899999999999999999999999999999765533 67788888
Q ss_pred EEEecCCcHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhcCCCcCCHH
Q 002687 353 SSSCKERGTLKALESMLIEVARVRLHG---FSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIE 429 (892)
Q Consensus 353 ~~~~~~~~~~~~~~~i~~~l~~l~~~g---~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (892)
.+.+.+.+...+.+.+.+++..+++.+ +++++++++|..+...+.... ......++.+......+.......
T Consensus 322 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~-----~s~~~~~~~~~~~~~~~~~~~~~~ 396 (438)
T COG0612 322 YAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSL-----DSPSSIAELLGQYLLLGGSLITLE 396 (438)
T ss_pred EEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhcc-----CCHHHHHHHHHHHHHhcCCccCHH
Confidence 888887777777777777777777664 999999999999888764332 233456666666666655544444
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEeCCCC
Q 002687 430 YEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQT 469 (892)
Q Consensus 430 ~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~~p~~ 469 (892)
. +.+.|++||++||++++++++.+++..+++++|..
T Consensus 397 ~----~~~~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~~ 432 (438)
T COG0612 397 E----LLERIEAVTLEDVNAVAKKLLAPENLTIVVLGPEK 432 (438)
T ss_pred H----HHHHHHhcCHHHHHHHHHHhcCCCCcEEEEEcccc
Confidence 3 34569999999999999999999999999998865
No 9
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=3.8e-47 Score=421.59 Aligned_cols=333 Identities=16% Similarity=0.159 Sum_probs=279.1
Q ss_pred EEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChh-hHHHHHHHccCccCCCccc
Q 002687 40 YGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH-DIIKFLESIGAEFGACQNA 118 (892)
Q Consensus 40 ~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~-~l~~~l~~~g~~~g~~~na 118 (892)
..+|+||++|++++++... .+++.++|++||++|+.++.|+|||+|||+|+||++++.. ++.+.++.+|+. +||
T Consensus 2 ~~tL~NGLrVllv~~p~~p-~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~----lNA 76 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAK-RAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQ----VNA 76 (696)
T ss_pred eEEcCCCCEEEEEECCCCC-EEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCe----EEE
Confidence 4689999999999988643 6899999999999999999999999999999999999986 799999999755 499
Q ss_pred cccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCcc-cchHHHHHHHHccCCCCCC
Q 002687 119 VTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS-GRMQDAHWVLMMEGSKYAE 197 (892)
Q Consensus 119 ~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 197 (892)
+|+.|+|+|++++++++ ++.+|++++|++.+|.|+++++++||++|++|+++..+++ ..+.+.+.+.+|++|||+
T Consensus 77 ~Ts~d~T~y~~~v~~~~---l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~- 152 (696)
T TIGR02110 77 TTLERTTAFFFELPAAA---LAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLR- 152 (696)
T ss_pred EEcCCeEEEEEEecHHH---HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCC-
Confidence 99999999999999654 9999999999999999999999999999999999886654 456777888899999999
Q ss_pred CCCCCCHHHhcCCC---HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCc
Q 002687 198 CLPIGLEKVIRTVS---SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPR 274 (892)
Q Consensus 198 ~~~~g~~~~i~~~t---~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 274 (892)
++++|+.++|++++ .++|++||++||+|+||+|+|+||+ ++++++++++++|+.|+....+... .+.+.....+
T Consensus 153 ~~~iGt~esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdv-s~eel~~l~e~~f~~~~~~~~~~~~--~~~p~~~~~~ 229 (696)
T TIGR02110 153 RFHAGSRDSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQ-SLDELEQLAARFGASLAAGGECAQA--PPAPLLRFDR 229 (696)
T ss_pred CCCCCCHHHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCC-CHHHHHHHHHHHhCCCCCCCCCCCC--CCCCCCCCce
Confidence 89999999999876 9999999999999999999999999 9999999999999999765433211 1112212222
Q ss_pred eEEeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeecccCcccccc--cEEEE
Q 002687 275 FSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPL--KAYIM 352 (892)
Q Consensus 275 ~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~~~~~~~~~~~--~~~~i 352 (892)
. .+..... .++.+.|..|+.+..+++ ++.+++.+|+++.+|+|+..+|+ +|++|++++++. + .+. +.|.|
T Consensus 230 ~-~~~~~~~--~q~~l~~~~p~~~~~d~~--al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~-~-~~~g~~lf~I 301 (696)
T TIGR02110 230 L-TLAGGSE--PRLWLLFALAGLPATARD--NVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWL-Y-QDAGQALLAL 301 (696)
T ss_pred e-EEEecCc--ceEEEEEeecCCCCCChH--HHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEecc-c-cCCCCcEEEE
Confidence 2 2222333 455566666655444444 47889999999999999999996 899999998653 2 444 48999
Q ss_pred EEEec---CCcHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHH
Q 002687 353 SSSCK---ERGTLKALESMLIEVARVRLH--GFSEREVSVARALL 392 (892)
Q Consensus 353 ~~~~~---~~~~~~~~~~i~~~l~~l~~~--g~~~~el~~ak~~~ 392 (892)
++.+. +++.+++++.|+++|++++++ +++.+|++++|..-
T Consensus 302 ~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~ 346 (696)
T TIGR02110 302 EFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRR 346 (696)
T ss_pred EEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhh
Confidence 98873 458899999999999999998 89999999999763
No 10
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-45 Score=352.44 Aligned_cols=401 Identities=16% Similarity=0.197 Sum_probs=333.0
Q ss_pred CCcEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCC
Q 002687 36 FGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGAC 115 (892)
Q Consensus 36 ~~~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~ 115 (892)
..++..+|+|||+|...+.+ ...++++|++++||++|...-.|++||+|.|+|+.|.+++.+++...||++| |.
T Consensus 23 ~~~kvttL~NGlkvase~~p--g~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~G----Gn 96 (472)
T KOG2067|consen 23 SNTKVTTLPNGLKVASENTP--GQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLG----GN 96 (472)
T ss_pred ccceeeecCCccEEeccCCC--CCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhC----Cc
Confidence 35899999999998776654 4468999999999999999999999999999999999999999999999986 55
Q ss_pred ccccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCC-cccchHHHHHHHHccCCC
Q 002687 116 QNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRN-ASGRMQDAHWVLMMEGSK 194 (892)
Q Consensus 116 ~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~-~~~~~~~~~~~~l~~~~~ 194 (892)
+.+.|++|.+.|.+++.++. ++.++.+|+|.+.+|+|++++++.+|..+.-|+..--. +...+.+.++.+.|.+..
T Consensus 97 ~~cqsSRetm~Yaas~~~~~---v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~nt 173 (472)
T KOG2067|consen 97 CDCQSSRETMMYAASADSDG---VDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNT 173 (472)
T ss_pred ccccccHhhhHHHHHhhhcc---cHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCc
Confidence 69999999999999999766 99999999999999999999999999999988876533 444678889999999988
Q ss_pred CCCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCc
Q 002687 195 YAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPR 274 (892)
Q Consensus 195 ~~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 274 (892)
.+ .+-.+..+.|++|+.+.|.+|.+++|+|++|++..|| | +++++++.++++|+.||+...|+.... +.... ..
T Consensus 174 lg-~pl~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V-~heelv~~~~~~~~~~~s~~~p~i~~~--~aQYt-GG 247 (472)
T KOG2067|consen 174 LG-LPLLCPEENIDKINREVLEEYLKYFYTPERMVLAGVG-V-EHEELVEIAEKLLGDLPSTKVPPIDES--KAQYT-GG 247 (472)
T ss_pred cc-ccccCChhhhhhhhHHHHHHHHHhcCChhheEeeecC-C-CHHHHHHHHHHHhccCCccCCCCcccc--hhhcc-cc
Confidence 88 7888999999999999999999999999999999999 6 999999999999999988644332111 11111 11
Q ss_pred eEEee-c----C-CCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHH-----------HHHHHHHHHhccCCCCeeeee
Q 002687 275 FSCFI-E----S-EAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH-----------ALNQRFFKLSRRKDPPYFSCS 337 (892)
Q Consensus 275 ~~~~~-~----~-~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~-----------~~~srL~~~lr~~~~~~~~~~ 337 (892)
..... + . ...-+.|.++|..++ ++++|.+++.+|+-++|| |+.||||..+.....|.|++.
T Consensus 248 ~~~~~~d~~~~~~g~EltHv~lg~Eg~~--~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sct 325 (472)
T KOG2067|consen 248 ELKIDTDAPQVTGGPELTHVVLGFEGCS--WNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCT 325 (472)
T ss_pred ccccCCCCccccCccceeeeeEeeccCC--CCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhh
Confidence 00000 0 0 125688999998765 578999999999999996 667999999998999999999
Q ss_pred cccCcccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHH
Q 002687 338 ASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQ 417 (892)
Q Consensus 338 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (892)
++...+ .++|+|.|++.+.|+...++++.+.+++..+.. |++++|++|||+++++.+..+++.+. -...++..
T Consensus 326 Afnhsy-~DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~-~v~~~el~RAK~qlkS~LlMNLESR~-----V~~EDvGR 398 (472)
T KOG2067|consen 326 AFNHSY-SDTGLFGIYASAPPQAANDAVELIAKEMINMAG-GVTQEELERAKTQLKSMLLMNLESRP-----VAFEDVGR 398 (472)
T ss_pred hhhccc-cCCceeEEeccCCHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhcccccc-----hhHHHHhH
Confidence 988755 999999999999999999999999999999865 69999999999999999887764432 34456665
Q ss_pred Hhhc-CCCcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEe
Q 002687 418 HFLC-KEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTI 465 (892)
Q Consensus 418 ~~~~-~~~~~~~~~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~ 465 (892)
+++. |... ..+ .+.+.|+++|++||.+++.+.|..+..+....
T Consensus 399 QVL~~g~rk-~p~----e~~~~Ie~lt~~DI~rva~kvlt~~p~va~~G 442 (472)
T KOG2067|consen 399 QVLTTGERK-PPD----EFIKKIEQLTPSDISRVASKVLTGKPSVAAFG 442 (472)
T ss_pred HHHhccCcC-CHH----HHHHHHHhcCHHHHHHHHHHHhcCCceeccCC
Confidence 5544 4332 223 35567999999999999999998877655433
No 11
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-36 Score=309.21 Aligned_cols=792 Identities=14% Similarity=0.121 Sum_probs=471.8
Q ss_pred EEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCcccc
Q 002687 40 YGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAV 119 (892)
Q Consensus 40 ~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~na~ 119 (892)
+..=..|++|.+...+.+. +.=.+.| ..|..+..|+.|-|||+.|+|+++||-+.+...+..+. + ++.||.
T Consensus 23 yis~~Tkl~va~~~~pts~--vhG~f~v----~TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~--l-~dtNAw 93 (1022)
T KOG0961|consen 23 YISKNTKLRVAIGEVPTSM--VHGAFSV----VTEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRC--L-ADTNAW 93 (1022)
T ss_pred EeccccceEEEEeecCCcc--eeeeEEe----eeeecCCCCCchhHHHHhhhccccCCcccHHHHhhcch--h-cccccc
Confidence 3344568999998877654 4433444 34667779999999999999999999998777776544 2 458999
Q ss_pred ccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHH----------HHHHHHHHhcCCCcccc-hHHHHHHH
Q 002687 120 TSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKE----------RGAVLEEYRGNRNASGR-MQDAHWVL 188 (892)
Q Consensus 120 t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~e----------r~~v~~e~~~~~~~~~~-~~~~~~~~ 188 (892)
|+.|+|.|.++.... +.+-.+|.++.|.+.+|.++.+.+-.| +|+|.+||+..++.... +.....+.
T Consensus 94 TDtD~T~YtLStag~--dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~ 171 (1022)
T KOG0961|consen 94 TDTDHTAYTLSTAGS--DGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEV 171 (1022)
T ss_pred cccCcceEEeecccc--cchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhhee
Confidence 999999999997653 348999999999999999999999776 79999999987765544 45566667
Q ss_pred Hcc-CCCCCCCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCC--CCCC----
Q 002687 189 MME-GSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSAT--DPPV---- 261 (892)
Q Consensus 189 l~~-~~~~~~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~--~~~~---- 261 (892)
.|| +++|. ..++|-.+.++.+|.+.+|+||+++|+|+||+++|+|.| ++++++...+..-..++... .|..
T Consensus 172 ~yP~~sgY~-~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v-~~d~lL~~m~~~~neile~~s~vP~~~~rP 249 (1022)
T KOG0961|consen 172 IYPPFSGYA-VETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMV-DHDQLLEIMNNVENEILEHMSTVPDHFPRP 249 (1022)
T ss_pred ecCCCCCce-eccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCc-CHHHHHHHHHHHHhhhhhccccCCCCCCCC
Confidence 786 88998 789999999999999999999999999999999999999 99999998876655443321 1111
Q ss_pred CCCCCCCC-CCCCceE--EeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCeeeee
Q 002687 262 IPKFPVPS-HQEPRFS--CFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKD-PPYFSCS 337 (892)
Q Consensus 262 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~-~~~~~~~ 337 (892)
+...+.+. ..+.... .+......+..|.++|.+++.. +-....++.+|...|...--+.+.+.+.+-. ..+-+++
T Consensus 250 f~~tn~~~~i~e~t~~tVefp~~Des~G~v~~aW~g~s~s-D~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~ 328 (1022)
T KOG0961|consen 250 FSFTNALSDIKESTVHTVEFPTDDESRGAVEVAWFGHSPS-DLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVS 328 (1022)
T ss_pred cccccCcccCCccceeeeecCCcccccceEEEEEcCCCHH-HhhhHHHHHHHHHHhccccccccccceEEecCcccccee
Confidence 11111111 1111121 2223345688999999988642 3455677788888887655566666666543 3344443
Q ss_pred cccCcccccccEEEEEEE-ecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHH
Q 002687 338 ASADDLVRPLKAYIMSSS-CKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECL 416 (892)
Q Consensus 338 ~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (892)
.... + +-.....+.+. +.-+++++....+++.+.. ...|+ ++|++..+.......+.+.+....+.++..++
T Consensus 329 f~~~-~-~vrc~i~L~f~gVP~EKi~~~~~k~l~~l~e--t~~iD---m~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii 401 (1022)
T KOG0961|consen 329 FHIA-E-GVRCDIRLNFAGVPVEKIDECAPKFLDKLVE--TANID---MERMGYLIDQTILNYLVNLETNAPSDFMSHII 401 (1022)
T ss_pred eeee-c-ccceeEEEeecCCcHHHhhhhhHHHHHHHHH--hcccC---HHHHHHHHHHHHHHHHHhhhcCChHHHHHHHh
Confidence 3332 2 22233344443 4446666665556555543 23464 44444444444333344445555667777777
Q ss_pred HHhhcCCCc----CCHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCeEEEEeCCCCCC-------------------CH
Q 002687 417 QHFLCKEPI----IGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFS-------------------TI 473 (892)
Q Consensus 417 ~~~~~~~~~----~~~~~~~~~~~~~l~~vt~~~i~~~~~~~l~~~~~~~~~~~p~~~~-------------------~~ 473 (892)
...++|..- ...-.+. .+.+.|.+....|..++.++||..++.++|+..|.... +.
T Consensus 402 ~d~~ygnedg~~l~~~lk~l-~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia~Ps~em~e~i~kE~~~~i~~r~~~lg~ 480 (1022)
T KOG0961|consen 402 GDQLYGNEDGELLKKRLKEL-DFLKKLKSWPAKDWVQLLNKYFVENPSATVIAVPSEEMVEKIAKEEEKRIAARCEKLGK 480 (1022)
T ss_pred hhhhccCcchhHHHHHHHhH-HHHHHHhhccHHHHHHHHHHHhccCCCeEEEecCcHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 777776431 1111111 23456888999999999999999988888888886531 11
Q ss_pred HHHHHHHHHHHhhhccCCCCCCccCCccccccCCC--CCCceeeeEEecCCCeEEEE----ecCCcEE-----------E
Q 002687 474 DDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKP--SPGNIVQQFEYENLGATELV----LSNGMRV-----------C 536 (892)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~----L~NG~~v-----------~ 536 (892)
+.++...+++.+.. .....++|..++.+.. .|..+. .+....++... .+|-++- .
T Consensus 481 ~gle~l~k~L~~ak-----~~N~~~~p~~ll~~f~I~~peS~e---f~~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~f 552 (1022)
T KOG0961|consen 481 KGLEELGKSLEAAK-----LENTANHPSALLLDFLIVKPESLE---FFDRFPVQTLTSNSPFDNELTPQQSTFLAQFPFF 552 (1022)
T ss_pred hhHHHHHHHHHHhh-----hcccCCCCHHHHhheeccCchhee---eeeccceeeccCCCCCCccccceeecccccCCce
Confidence 11111111111111 0111222333222211 111110 11111111100 0111111 1
Q ss_pred EeeCCCCCCeEEEEEEecCcCCCCCcchhhh---hchhH--HhhhhcCCC----CCCHHHHHHHHcCceEEEEEeec---
Q 002687 537 YKCTDFLDDQVLFTGFSYGGLSELPESEYLS---CSMGS--TIAGEIGVF----GYRPSMLMDMLAGKRVEGGTKVG--- 604 (892)
Q Consensus 537 ~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~---~~l~~--~l~~~~g~~----~~~~~~l~~~l~~~g~~~~~~~~--- 604 (892)
+.=++....-|-+......+.-......++. .+++. .|+ .|+- ..+.+++.+.+....++.+..++
T Consensus 553 i~l~h~ps~Fvel~fl~dss~i~~sl~pYl~~f~~l~~~~pa~l--dgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G 630 (1022)
T KOG0961|consen 553 INLHHCPSKFVELFFLLDSSNISISLRPYLFLFTDLLFESPAML--DGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSG 630 (1022)
T ss_pred eecccCchHHHhHhhhhccccCchhhhhHHHHHHHHHhcCHHHh--cCCCCcchhhhHHHHHHHHHhhhhhhhhcccccc
Confidence 1101110001111111111111111223322 22211 112 2432 23445666666665554444443
Q ss_pred --ceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC-
Q 002687 605 --AYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI- 681 (892)
Q Consensus 605 --~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 681 (892)
.+...+.+.|..++.+...+|+.-.+..-.| |++++....++...+++.+..+...++.......+|+........
T Consensus 631 ~~~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~Vf-D~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d 709 (1022)
T KOG0961|consen 631 LYDRLVNLRIKVGADKYPLLVKWIQIFLQGVVF-DPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFD 709 (1022)
T ss_pred cchhheeEEEEEccCCcchhHHHHHHHhhhhcc-CHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhccc
Confidence 3457788999999999999999999998778 999999999999999999999988888899999999875543322
Q ss_pred ---ChhhhhcC-------------ChHHHHHHHhhhhCCCCCcEEEEEecCCc-cccHHHHHHhhccCCCCCCCCCccCc
Q 002687 682 ---RISDLQKV-------------DPLKACDYFNSCFKDPSTFTVVIVGNIDP-SNGIPLILQYLGGIPKPPEPILHFNR 744 (892)
Q Consensus 682 ---~~~~l~~l-------------~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~-~~~~~~i~~~~~~l~~~~~~~~~~~~ 744 (892)
..+-++.| .++++++ |. ++ .+.+.+.|+||++. +....-..........+.+.. .+.
T Consensus 710 ~L~~Ek~l~ei~~~v~n~~~~Il~~~e~mR~-y~-l~--~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~-~f~- 783 (1022)
T KOG0961|consen 710 ELVLEKLLEEISKDVMNNPEAILEKLEQMRS-YA-LF--SNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGH-QFS- 783 (1022)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-HH-Hh--hcceEEEEEeehhcCCccccCchhhhcCcccCCchh-hcc-
Confidence 12222222 1344444 22 23 37899999999973 444443444443332221110 000
Q ss_pred CCCC---CCCccCCCcceeeEEeCCCCCcceEEEEEEeccC--CCCcchHHHHHHHHHHHHH---HHHHHHHHhhhcCCe
Q 002687 745 DNLK---GLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVEL--KNGTMVEEINYVGFLSKLL---ETKMMQVLRFKHGQI 816 (892)
Q Consensus 745 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~L~~~l---~s~L~~~lRe~~gl~ 816 (892)
.++. ..+..+..+....++..+. ...+.+....+... .++.++. ..++++.| ...+|+-||- .|++
T Consensus 784 ~tf~~~~~~s~e~gsssk~~~I~~p~-sESs~l~~sip~~~~w~dpel~~----~~l~~~YL~~~eGPfW~~IRG-~GLA 857 (1022)
T KOG0961|consen 784 ATFEAGENVSLELGSSSKELLIGVPG-SESSFLYQSIPLDANWNDPELIP----AMLFGQYLSQCEGPFWRAIRG-DGLA 857 (1022)
T ss_pred cccccCcccceeccCCcceeEecCCC-ccccceeeecccccccCCcchhH----HHHHHHHHHhcccchhhhhcc-cchh
Confidence 0000 0111122222222222222 22334444445433 3343333 33445554 5789999994 6999
Q ss_pred eeeeEEeeccCCCCCCCCCcceeEEEEEEeCcccHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhhh
Q 002687 817 YSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQK--EGPSDEDVSTILELEQRAHE 887 (892)
Q Consensus 817 Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~--~~is~~el~~ak~~~~~~~~ 887 (892)
|+++....- ..+.+.+.+.+.++ +.++.+.-+++++.+.. ..+++.+++-||......+.
T Consensus 858 YGanm~~~~----------d~~~~~~~iyr~ad-~~kaye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~ 919 (1022)
T KOG0961|consen 858 YGANMFVKP----------DRKQITLSIYRCAD-PAKAYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMM 919 (1022)
T ss_pred ccceeEEec----------cCCEEEEEeecCCc-HHHHHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHH
Confidence 998887753 24456666666554 35578888888888865 57999999999998876553
No 12
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=3.7e-36 Score=334.22 Aligned_cols=334 Identities=12% Similarity=0.052 Sum_probs=271.9
Q ss_pred EEEecCCcEEEEeeCCCCCCeEEEEEEecCc-CCCCCcchhhhhchhHHhhhhcCCCCCCHH-HHHHHHcCceEEEEEee
Q 002687 526 ELVLSNGMRVCYKCTDFLDDQVLFTGFSYGG-LSELPESEYLSCSMGSTIAGEIGVFGYRPS-MLMDMLAGKRVEGGTKV 603 (892)
Q Consensus 526 ~~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg-~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~-~l~~~l~~~g~~~~~~~ 603 (892)
.++|+||++|++.+++..+ .+.+.+++.+| ..+.++..|++|+++||++ .||++++.. ++.+.++.+|+++|++|
T Consensus 2 ~~tL~NGLrVllv~~p~~p-~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLF--kGT~~~~~~~~i~~~le~lGG~lNA~T 78 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAK-RAAALLRVAAGSHDEPSAWPGLAHFLEHLLF--LGGERFQGDDRLMPWVQRQGGQVNATT 78 (696)
T ss_pred eEEcCCCCEEEEEECCCCC-EEEEEEEEeeccCCCCCCCCcHHHHHHHHHh--cCCCCCCcHHHHHHHHHHhCCeEEEEE
Confidence 4689999999999988766 58888866644 4555578999999999999 799999985 79999999999999999
Q ss_pred cceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC--
Q 002687 604 GAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI-- 681 (892)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 681 (892)
+.++|.|++++++++++.+|+++.+++.+|.| ++++|+++|+++++|++...++|.....+.+...+|++|||+++.
T Consensus 79 s~d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f-~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iG 157 (696)
T TIGR02110 79 LERTTAFFFELPAAALAAGLARLCDMLARPLL-TAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAG 157 (696)
T ss_pred cCCeEEEEEEecHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 899999999999999999999999999999999999999999876
Q ss_pred ChhhhhcCC---hHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcc
Q 002687 682 RISDLQKVD---PLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSI 758 (892)
Q Consensus 682 ~~~~l~~l~---~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (892)
+.++|++++ .+++++||++ ||.|+||+++|+||++.+++.++++++|+.|+.+..+.. ..+.+ .....
T Consensus 158 t~esL~~it~~t~edL~~F~~~-~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~------~~~~p-~~~~~- 228 (696)
T TIGR02110 158 SRDSLALPNTAFQQALRDFHRR-HYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQ------APPAP-LLRFD- 228 (696)
T ss_pred CHHHHhCcccchHHHHHHHHHH-hcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCC------CCCCC-CCCCc-
Confidence 888998765 9999999998 889999999999999999999999999999987644320 01111 11111
Q ss_pred eeeEEeCCCCCcceEEEEEEeccCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCcce
Q 002687 759 IREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRG 838 (892)
Q Consensus 759 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g 838 (892)
...+... ..++..+.+.++... ..+.....++..+|++.++++|+.+||+ +|++|++++++.+.. .+.+
T Consensus 229 -~~~~~~~-~~~q~~l~~~~p~~~-~~d~~al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~-------~g~~ 297 (696)
T TIGR02110 229 -RLTLAGG-SEPRLWLLFALAGLP-ATARDNVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQD-------AGQA 297 (696)
T ss_pred -eeEEEec-CcceEEEEEeecCCC-CCChHHHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccC-------CCCc
Confidence 1122222 234555555555421 2222235566778888889999999996 899999998653311 1245
Q ss_pred eEEEEEEe---CcccHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHH
Q 002687 839 DISINFSC---DPEISFKLVDLALDEISRLQKE--GPSDEDVSTILELEQ 883 (892)
Q Consensus 839 ~~~i~~~~---~p~~~~~~~~~~~~~l~~l~~~--~is~~el~~ak~~~~ 883 (892)
.|.|++.+ .+++.+++++.+.++|++++++ +++.+|++++|..-.
T Consensus 298 lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~ 347 (696)
T TIGR02110 298 LLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRF 347 (696)
T ss_pred EEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhh
Confidence 88899987 3558999999999999999888 899999999998743
No 13
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=2.5e-36 Score=333.15 Aligned_cols=348 Identities=22% Similarity=0.235 Sum_probs=288.6
Q ss_pred CeEEEEecCCcEEEEeeCCCCCCeEEEEEEec-CcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEE
Q 002687 523 GATELVLSNGMRVCYKCTDFLDDQVLFTGFSY-GGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGT 601 (892)
Q Consensus 523 ~~~~~~L~NG~~v~~~~~~~~~~~v~~~~~~~-gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~ 601 (892)
+++.++|+||+++++.+++..+ .+.+.+++. |+..+.+...|++|+++||++ .|+++++..++.+.++..|+.+++
T Consensus 16 ~~~~~~L~nGl~~~~~~~~~~~-~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~f--kgt~~~~~~~i~~~~~~~G~~~na 92 (438)
T COG0612 16 GLQVFTLPNGLRVITYPNPTAP-TVSLDVWVKAGSRAEPAGKAGIAHFLEHMAF--KGTTGLPSAELAEAFEKLGGQLNA 92 (438)
T ss_pred cceEEEcCCCCEEEEEeCCCCC-EEEEEEEEeecccCCCCCcccHHHHHHHHHc--cCCCCCChHHHHHHHHHhcCeeec
Confidence 4788999999999999998744 688888776 666667788999999999999 699999888999999999999999
Q ss_pred eecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC
Q 002687 602 KVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (892)
Q Consensus 602 ~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (892)
+|+.+++.|++++.+++++.+++++++++.+|.| +++.|+++|.++++++++..++|.+.+...+...+|++||+++++
T Consensus 93 ~ts~d~t~y~~~~l~~~~~~~l~llad~l~~p~f-~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~ 171 (438)
T COG0612 93 FTSFDYTVYYLSVLPDNLDKALDLLADILLNPTF-DEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPI 171 (438)
T ss_pred cccchhhhhhhhhchhhhHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCC
Confidence 9999999999998999999999999999999998 899999999999999999999999999999999999999999988
Q ss_pred --ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcce
Q 002687 682 --RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSII 759 (892)
Q Consensus 682 --~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (892)
+.++|+++|.++|++||++ ||+|+||+++|+||++.+++.++++++|++|+...++. ...+.+...+ . .
T Consensus 172 ~G~~e~I~~it~~dl~~f~~k-~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~------~~~~~~~~~~-~-~ 242 (438)
T COG0612 172 LGTEESIEAITREDLKDFYQK-WYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPP------KIPPEPPLGP-E-R 242 (438)
T ss_pred CCCHHHHHhCCHHHHHHHHHH-hcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCC------CCCCccccCC-C-c
Confidence 8999999999999999998 99999999999999999999999999999999722221 0111111111 1 1
Q ss_pred eeEEeC--CCCCcceEEEEEEeccCC-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCC
Q 002687 760 REVVRS--PMVEAQCSVQLCFPVELK-NG-TMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGD 835 (892)
Q Consensus 760 ~~~~~~--~~~~~~~~v~~~~~~~~~-~~-~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~ 835 (892)
...... .+...++.+.++++.+.. ++ ++....+.+.+||+.+.||||.++||+.|++|++++......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~-------- 314 (438)
T COG0612 243 VVRVNDPEQPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLS-------- 314 (438)
T ss_pred eEEecCCCCchhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccccc--------
Confidence 111111 223356677777776433 22 455556666777888899999999999999999997554322
Q ss_pred cceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHhhhhhcC
Q 002687 836 VRGDISINFSCDPEISFKLVDLALDEISRLQKEG---PSDEDVSTILELEQRAHETGLQ 891 (892)
Q Consensus 836 ~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~---is~~el~~ak~~~~~~~~~~~~ 891 (892)
..|.+.+++.+++.+.+++.+.+.+++..+.+.. +++++++.+|..+.+.+....+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~ 373 (438)
T COG0612 315 DSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLD 373 (438)
T ss_pred ccCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccC
Confidence 3678889999998888888888888888887654 9999999999999987765543
No 14
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.3e-33 Score=269.60 Aligned_cols=345 Identities=12% Similarity=0.084 Sum_probs=289.6
Q ss_pred CeEEEEecCCcEEEEeeCCCCCCeEEEEEEec-CcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEE
Q 002687 523 GATELVLSNGMRVCYKCTDFLDDQVLFTGFSY-GGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGT 601 (892)
Q Consensus 523 ~~~~~~L~NG~~v~~~~~~~~~~~v~~~~~~~-gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~ 601 (892)
+.+..+|+||++|....+ ... ...+.+++. |++.+.+.++|.+|+|+|+.| -||++.+...+...++..|+.+|+
T Consensus 33 ~t~vttL~NGlrVaTE~~-~a~-TATVGVwidaGSR~EnekNNG~ahFLEhlaF--KGT~~Rs~~alElEieniGahLNA 108 (467)
T KOG0960|consen 33 ETEVTTLPNGLRVATEHN-SAS-TATVGVWIDAGSRFENEKNNGTAHFLEHLAF--KGTKNRSQAALELEIENIGAHLNA 108 (467)
T ss_pred cceEEEcCCCcEEEeccC-CCc-ceEEEEEeccCccccccccccHHHHHHHHHh--cCCCcchhHHHHHHHHHHHHHhcc
Confidence 356679999999988776 444 477777666 666777788999999999999 599999999999999999999999
Q ss_pred eecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC
Q 002687 602 KVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (892)
Q Consensus 602 ~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (892)
+++.+.+.|+.+++++++++++++|++++.+..+ ++.+|+++|.+++.|++....+-..+..+.++...|+++|.++.+
T Consensus 109 ytSReqT~yyakal~~dv~kavdiLaDIlqns~L-~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~ti 187 (467)
T KOG0960|consen 109 YTSREQTVYYAKALSKDVPKAVDILADILQNSKL-EESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTI 187 (467)
T ss_pred cccccceeeehhhccccchHHHHHHHHHHHhCcc-chhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccc
Confidence 9999999999999999999999999999999877 899999999999999999999999999999999999999999988
Q ss_pred --ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcce
Q 002687 682 --RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSII 759 (892)
Q Consensus 682 --~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (892)
..+.|++|+.+||+.|.+. +|.+++|++.-+|.++.+++.+++++|||.++....+... +..++ ..|. .
T Consensus 188 lGp~enI~si~r~DL~~yi~t-hY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~---~~~~~--~~Ft---g 258 (467)
T KOG0960|consen 188 LGPSENIKSISRADLKDYINT-HYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKV---PLVPP--ARFT---G 258 (467)
T ss_pred cChhhhhhhhhHHHHHHHHHh-cccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCC---CCCCC--cccc---C
Confidence 8999999999999999987 7788999999999999999999999999998863332200 00111 1122 1
Q ss_pred eeEEeCCCCCcceEEEEEEec-cCCCCcchHHHHHHHHHHHH---------HHHHHHHHHhhhcCCeeeeeEEeeccCCC
Q 002687 760 REVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSKL---------LETKMMQVLRFKHGQIYSASVSVFLGGNK 829 (892)
Q Consensus 760 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~L~~~---------l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~ 829 (892)
.++....+.-|.+++.++..+ ++.++|+....++..++|+. ..++|-..+-+. .++-+..++..
T Consensus 259 sEvR~rdd~lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFnt----- 332 (467)
T KOG0960|consen 259 SEVRVRDDDLPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFNT----- 332 (467)
T ss_pred ceeeecCCCCchhheeeeEecCCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhhc-----
Confidence 234444445689999999988 78889988778888888864 368898888765 56665544322
Q ss_pred CCCCCCcceeEEEEEEe-CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhhhcC
Q 002687 830 HSRTGDVRGDISINFSC-DPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQ 891 (892)
Q Consensus 830 ~~~~~~~~g~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~~~~~~ 891 (892)
.|. .+|.|++++.| ++..++.++..+.+++.+|.. .+|+.|+++||+.++.++.++++
T Consensus 333 --~Yk-DTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ld 391 (467)
T KOG0960|consen 333 --SYK-DTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLAT-SVTEAEVERAKNQLKTNLLLSLD 391 (467)
T ss_pred --ccc-cccceeEEEEecChhhHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhc
Confidence 133 48999999999 899999999999999999987 69999999999999999988775
No 15
>PRK15101 protease3; Provisional
Probab=100.00 E-value=6e-33 Score=337.43 Aligned_cols=345 Identities=12% Similarity=0.072 Sum_probs=279.3
Q ss_pred CeEEEEecCCcEEEEeeCCCCCCeEEEEEEecCc-CCCCCcchhhhhchhHHhhhhcCCCCCC-HHHHHHHHcCceEEEE
Q 002687 523 GATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGG-LSELPESEYLSCSMGSTIAGEIGVFGYR-PSMLMDMLAGKRVEGG 600 (892)
Q Consensus 523 ~~~~~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg-~~~~~~~~g~~~~l~~~l~~~~g~~~~~-~~~l~~~l~~~g~~~~ 600 (892)
.++.++|+||++|++.+++..+ .+.+.+.+.+| ..+.++..|++|+++||++ .||++++ .+++.+.++.+|+++|
T Consensus 43 ~~~~~~L~NGL~v~l~~~~~~~-~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf--~GT~~~p~~~~~~~~l~~~Gg~~N 119 (961)
T PRK15101 43 QYQAIRLDNGMTVLLVSDPQAV-KSLAALALPVGSLEDPDAQQGLAHYLEHMVL--MGSKKYPQPDSLAEFLKKHGGSHN 119 (961)
T ss_pred ceEEEEeCCCCEEEEEeCCCCc-ceeEEEEeCcCCCCCCCCCCchHHHHHHHHh--cCCccCCCcchHHHHHHHhCCCcc
Confidence 4677899999999999998766 47777766644 4555578999999999999 8999996 5789999999999999
Q ss_pred EeecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCC
Q 002687 601 TKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRP 680 (892)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (892)
++|+.+.|.|++++++++++.+|+++++++.+|.| +++.++++++++.+|+++..++|.+.+.+.+...+|++||++++
T Consensus 120 A~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f-~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~ 198 (961)
T PRK15101 120 ASTASYRTAFYLEVENDALPPAVDRLADAIAEPLL-DPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRF 198 (961)
T ss_pred ceECCCceEEEEEcCHHHHHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccC
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999987
Q ss_pred C--ChhhhhcC----ChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccC
Q 002687 681 I--RISDLQKV----DPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTF 754 (892)
Q Consensus 681 ~--~~~~l~~l----~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 754 (892)
. +.++|.++ +.++|++||++ ||.|+||+++|+||++.+++.++++++|+.||.+..+... ....+. .
T Consensus 199 ~~G~~etl~~~~~~~~~~~L~~f~~~-~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~-----~~~~~~-~ 271 (961)
T PRK15101 199 SGGNLETLSDKPGSKLQDALVDFYQR-YYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPE-----ITVPVV-T 271 (961)
T ss_pred CCCCHHHhhcCCchHHHHHHHHHHHH-hCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCC-----CCCCCC-C
Confidence 6 88999887 69999999998 8899999999999999999999999999999876533210 100010 1
Q ss_pred CCcceeeEEeCCCCCcceEEEEEEeccCCCCcc--hHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCCC
Q 002687 755 PSSIIREVVRSPMVEAQCSVQLCFPVELKNGTM--VEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSR 832 (892)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~ 832 (892)
+......+... ...++..+.+.|+.+.....+ ....++..+|++...+.|+..|+ ++|++|+++++.....
T Consensus 272 ~~~~~~~~~~~-~~~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~~----- 344 (961)
T PRK15101 272 DAQKGIIIHYV-PAQPRKVLRVEFRIDNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPMV----- 344 (961)
T ss_pred HHHcCeEEEEE-ECCCCcEEEEEEecCCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHH-HcCccceeeecccccc-----
Confidence 11111111111 224566788888875433222 12345556666665667888885 7899999988754211
Q ss_pred CCCcceeEEEEEEeCcc---cHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 002687 833 TGDVRGDISINFSCDPE---ISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAH 886 (892)
Q Consensus 833 ~~~~~g~~~i~~~~~p~---~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~ 886 (892)
+...|.|.|++.++++ +++++++.+.++|+.+++.++++++|+++|..+..++
T Consensus 345 -~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~ 400 (961)
T PRK15101 345 -DRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDF 400 (961)
T ss_pred -CCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccc
Confidence 1146889999999885 7899999999999999999999999999999988766
No 16
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.8e-29 Score=244.14 Aligned_cols=350 Identities=13% Similarity=0.127 Sum_probs=291.6
Q ss_pred CeEEEEecCCcEEEEeeCCCCCCeEEEEEEec-CcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEE
Q 002687 523 GATELVLSNGMRVCYKCTDFLDDQVLFTGFSY-GGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGT 601 (892)
Q Consensus 523 ~~~~~~L~NG~~v~~~~~~~~~~~v~~~~~~~-gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~ 601 (892)
..+..+|+||+||...+++.. -..+.+++. |.+++.+.-.|++|+++.+.| ..|.+++..++...++.+|+.+.+
T Consensus 24 ~~kvttL~NGlkvase~~pg~--f~~vGlyIdsGsrYE~~~~~GisH~lerLAF--~ST~~~~~~ei~~~LE~~GGn~~c 99 (472)
T KOG2067|consen 24 NTKVTTLPNGLKVASENTPGQ--FCTVGLYIDSGSRYEAKYFSGISHFLERLAF--KSTERFSSKEILAELEKLGGNCDC 99 (472)
T ss_pred cceeeecCCccEEeccCCCCC--ceEEEEEEecCccccCcCcccHHHHHHHHhh--ccccCCcHHHHHHHHHHhCCcccc
Confidence 456679999999988776543 355555555 777887788999999999999 588899999999999999999999
Q ss_pred eecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC
Q 002687 602 KVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (892)
Q Consensus 602 ~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (892)
.++.+.++|..++.+++++.++.+|++.+.+|.| ++++++..+..+.-|+......|+..+.+.++...|.+...+.+.
T Consensus 100 qsSRetm~Yaas~~~~~v~sm~~lLadtV~~P~~-~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl 178 (472)
T KOG2067|consen 100 QSSRETMMYAASADSDGVDSMVELLADTVLNPKF-TDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPL 178 (472)
T ss_pred cccHhhhHHHHHhhhcccHHHHHHHHHHHhcccc-cHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccc
Confidence 9999999999999999999999999999999999 799999999999999999999999999999999999987777776
Q ss_pred --ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcce
Q 002687 682 --RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSII 759 (892)
Q Consensus 682 --~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (892)
..+.+..|+.+.|..|.+. +|.|.+|++.-+| ++.+++.+.++++|+.||+...|.++.+..++.--....+....
T Consensus 179 ~cp~~~i~~I~~~~l~~yl~~-~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~d~~ 256 (472)
T KOG2067|consen 179 LCPEENIDKINREVLEEYLKY-FYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDESKAQYTGGELKIDTDAP 256 (472)
T ss_pred cCChhhhhhhhHHHHHHHHHh-cCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcccchhhccccccccCCCCc
Confidence 6899999999999999987 8899999999999 58999999999999999997666644433333322111111111
Q ss_pred eeEEeCCCCCcceEEEEEEec-cCCCCcchHHHHHHHHHHH-----------HHHHHHHHHHhhhcCCeeeeeEEeeccC
Q 002687 760 REVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSK-----------LLETKMMQVLRFKHGQIYSASVSVFLGG 827 (892)
Q Consensus 760 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~L~~-----------~l~s~L~~~lRe~~gl~Y~~~~~~~~~~ 827 (892)
+ + .....-+.+.++|.+ ++.++|+.+..++..+||+ +|-||||.++-.++.|.|++-++...
T Consensus 257 ~--~--~~g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhs-- 330 (472)
T KOG2067|consen 257 Q--V--TGGPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHS-- 330 (472)
T ss_pred c--c--cCccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhcc--
Confidence 0 0 011145688889988 6777888877777777764 46899999999999999998776432
Q ss_pred CCCCCCCCcceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhhhcCC
Q 002687 828 NKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQV 892 (892)
Q Consensus 828 ~~~~~~~~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~~~~~~~ 892 (892)
|+ .+|.|.|+.+++|+.+.++++.+.+++-.+.. +++.+||++||.+++..+..+|++
T Consensus 331 -----y~-DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~-~v~~~el~RAK~qlkS~LlMNLES 388 (472)
T KOG2067|consen 331 -----YS-DTGLFGIYASAPPQAANDAVELIAKEMINMAG-GVTQEELERAKTQLKSMLLMNLES 388 (472)
T ss_pred -----cc-CCceeEEeccCCHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhcccc
Confidence 44 48999999999999999999999999999866 599999999999999999999875
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.95 E-value=1.5e-26 Score=275.83 Aligned_cols=343 Identities=11% Similarity=0.054 Sum_probs=252.8
Q ss_pred EecCCcEEEEeeCCCC-CCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCce--EEEEEeec
Q 002687 528 VLSNGMRVCYKCTDFL-DDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKR--VEGGTKVG 604 (892)
Q Consensus 528 ~L~NG~~v~~~~~~~~-~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g--~~~~~~~~ 604 (892)
-..||++|++.+.+.. .....+.+.+..|. .+..|++|+++|+++ .|+++++..++...+...| +.+|++|+
T Consensus 96 H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~---~d~~G~aH~LEH~~f--~GS~k~p~~~~~~~l~~~gl~~~lNA~T~ 170 (1119)
T PTZ00432 96 HKKTGLQVISLKTNDSSGKEMCFDFYVPTPP---HNDKGIPHILEHSVL--SGSKKYNYKDSFSLLVQGGFNSFLNAYTF 170 (1119)
T ss_pred EcCCCCEEEEEecCCCccceeEEEEEecCCC---CCCcchhHHHHHHHh--CCCCCCCcccHHHHHHhcCcCCCccccCC
Confidence 3469999998876542 11366666665453 466899999999999 8999999999888887655 77999999
Q ss_pred ceeEEEEEecChh-hHHHHHHHHHHHhcCCCCCCHHH--HHH---------H--------------------HHHHHHHH
Q 002687 605 AYMRTFSGDCSPS-DLETALQLVYQLFTTNVAPGEEE--VEI---------V--------------------MQMAEEVI 652 (892)
Q Consensus 605 ~~~~~~~~~~~~~-~l~~~l~ll~~~l~~p~~~~~~~--~~~---------~--------------------~~~~~~~~ 652 (892)
.++|.|.+.+.++ ++..+|+++.+.+.+|.+ +++. |.+ + +.++.+|+
T Consensus 171 ~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~-~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Em 249 (1119)
T PTZ00432 171 KDRTSYLFASTNEKDFYNTADVYMDSVFQPNI-LEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEM 249 (1119)
T ss_pred CCceEEEeccCCHHHHHHHHHHHHHHHhCcCc-ccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHH
Confidence 9999999998775 799999999999999998 4554 232 1 77899999
Q ss_pred HHhhcChHHHHHHHHHHHhcCCCCCCCCC--ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhc
Q 002687 653 RAQERDPYTAFANRVKEINYGNSYFFRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLG 730 (892)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~ 730 (892)
+...++|...+.+.+.+.+| +|||+++. +.++|.++|.+++++||++ ||.|+|++++|+||++.+++.++++++|+
T Consensus 250 k~~~~~p~~~~~~~~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~-~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~ 327 (1119)
T PTZ00432 250 KKRFSDPLSFGYSVIYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKT-YYGPKTATVYFYGPNDVTERLEFVDNYLT 327 (1119)
T ss_pred HHhhCCHHHHHHHHHHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHH-hcCccceEEEEEcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999 99999876 8999999999999999998 89999999999999999999999999999
Q ss_pred cCCCCCCCCCccCcC-CCCCCCc--cCCCcceeeEE-eCCCCCcceEEEEE-Eecc-C-----------CC-CcchHHHH
Q 002687 731 GIPKPPEPILHFNRD-NLKGLPF--TFPSSIIREVV-RSPMVEAQCSVQLC-FPVE-L-----------KN-GTMVEEIN 792 (892)
Q Consensus 731 ~l~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~-~-----------~~-~~~~~~~~ 792 (892)
.+|............ ...+.+. ..+ +...... .......+..+.++ |.++ . .+ .++.+..+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~V 406 (1119)
T PTZ00432 328 KHPKTGQLSHTAYREDADENLLYEEYKD-KPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLV 406 (1119)
T ss_pred hccccccccccccccccccccccccccc-CCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHH
Confidence 887652211000000 0000000 011 1111111 11111234445554 8663 2 11 22334444
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCeeeee-EEeeccCCCCCCCCCcceeEEEEEE-eCc-------ccHHHHHHHHHHHHH
Q 002687 793 YVGFLSKLLETKMMQVLRFKHGQIYSAS-VSVFLGGNKHSRTGDVRGDISINFS-CDP-------EISFKLVDLALDEIS 863 (892)
Q Consensus 793 ~~~~L~~~l~s~L~~~lRe~~gl~Y~~~-~~~~~~~~~~~~~~~~~g~~~i~~~-~~p-------~~~~~~~~~~~~~l~ 863 (892)
+..+|++..+++|++.||+ .|++|++. +++.... ..+.|.|.+. +.+ ++++++.+.+.++|+
T Consensus 407 Ls~lLggg~sS~L~q~LrE-~GLa~svv~~~~~~~~--------~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~ 477 (1119)
T PTZ00432 407 LNYLLLGTPESVLYKALID-SGLGKKVVGSGLDDYF--------KQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALT 477 (1119)
T ss_pred HHHHHcCCCccHHHHHHHh-cCCCcCCCcCcccCCC--------CceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHH
Confidence 5556666668999999996 79999963 3332111 3677888875 342 347799999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHhhhh
Q 002687 864 RLQKEGPSDEDVSTILELEQRAHET 888 (892)
Q Consensus 864 ~l~~~~is~~el~~ak~~~~~~~~~ 888 (892)
++.++|+++++|++++.++.-++.+
T Consensus 478 ~l~~eGi~~eele~a~~qlef~~rE 502 (1119)
T PTZ00432 478 KVVTEGFNKSAVEASLNNIEFVMKE 502 (1119)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998777654
No 18
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.95 E-value=2e-24 Score=211.36 Aligned_cols=384 Identities=14% Similarity=0.092 Sum_probs=274.3
Q ss_pred cEEEEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCcc
Q 002687 38 VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQN 117 (892)
Q Consensus 38 ~~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~n 117 (892)
....+|.|||+|.-.+++.|. .++.|.|++||++|+.++.|++|++....++.|+.++...|.+..+..|.. ++
T Consensus 23 ~~~~kl~ngL~Vas~e~~~~i--s~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~----Ls 96 (429)
T KOG2583|consen 23 SKTTKLVNGLTVASREAPTAI--SSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGT----LS 96 (429)
T ss_pred hhhhccccceEEEeccCCCcc--eEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCce----ee
Confidence 456689999999999988875 678999999999999999999999999999999999999999999999755 49
Q ss_pred ccccCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHH-HHHHHHHhcCCCcccchHHHHHHHHccCCCCC
Q 002687 118 AVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKER-GAVLEEYRGNRNASGRMQDAHWVLMMEGSKYA 196 (892)
Q Consensus 118 a~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er-~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~~ 196 (892)
.++++|+..|.++++.++ ++-.+.+|.+++..|.|.+++++... ..|..+.. +.++...+.+.++++.|.+ ..+
T Consensus 97 s~~tRe~~~~tvt~lrd~---~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~-~~t~~~~a~e~lH~aAfRn-gLg 171 (429)
T KOG2583|consen 97 STATRELIGLTVTFLRDD---LEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA-YQTPYTIAIEQLHAAAFRN-GLG 171 (429)
T ss_pred eeeecceEEEEEEEeccc---HHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh-hcChHHHHHHHHHHHHHhc-ccC
Confidence 999999999999999877 99999999999999999999999988 67766655 3455567788999999976 455
Q ss_pred CCCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCceE
Q 002687 197 ECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFS 276 (892)
Q Consensus 197 ~~~~~g~~~~i~~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (892)
++.....-.+.+++.++|.+|-+++|+.+|++|+-+| + |++.+....++++ .++........+. . -...+.+
T Consensus 172 -nslY~p~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~n-v-d~~~L~~~~~~~~-~~~~~~~~k~a~a-~-~~gGe~R-- 243 (429)
T KOG2583|consen 172 -NSLYSPGYQVGSVSSSELKDFAAKHFVKGNAVLVGVN-V-DHDDLKQFADEYA-PIRDGLPLKPAPA-K-YSGGEAR-- 243 (429)
T ss_pred -CcccCCcccccCccHHHHHHHHHHHhhccceEEEecC-C-ChHHHHHHHHHhc-cccCCCCCCCCCc-c-ccCCccc--
Confidence 4555555568899999999999999999999999999 5 8999999998883 3322111110110 0 0011111
Q ss_pred EeecCCCCceEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHH-----HHHHHHHhccCCCCeeeeecccCcccccccEEE
Q 002687 277 CFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHAL-----NQRFFKLSRRKDPPYFSCSASADDLVRPLKAYI 351 (892)
Q Consensus 277 ~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~-----~srL~~~lr~~~~~~~~~~~~~~~~~~~~~~~~ 351 (892)
.+...+...+.+.-. +....+...-.+..++...|+... .+.|........+.-.++++.... +.+.|+|.
T Consensus 244 --k~~~g~~~~v~vage-gAAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a~-ysDsGL~g 319 (429)
T KOG2583|consen 244 --KDARGNRVHVAVAGE-GAAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNAP-YSDSGLFG 319 (429)
T ss_pred --cccCCceeEEEEecC-cccccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeeccc-ccCCceEE
Confidence 122233344444332 233334556666677888888654 343433322111122344444443 48999999
Q ss_pred EEEEecCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhcCCCcCCHHHH
Q 002687 352 MSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYE 431 (892)
Q Consensus 352 i~~~~~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (892)
+++..+..+..++++.....|+.....+++-.-...+++.+........ ..+ ..........+. .
T Consensus 320 v~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~--------~a~--~~~~~~~a~~~~-~---- 384 (429)
T KOG2583|consen 320 VYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSV--------EAL--ELATGSQANLVS-E---- 384 (429)
T ss_pred EEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcch--------HHH--HHhhHHHhcCCC-C----
Confidence 9999999999999999888888888888887777776666655432211 011 111111111111 1
Q ss_pred HHHHHHHcCCCCHHHHHHHHHHHhccCC
Q 002687 432 ARLQKTLLPHISALEVSRYSEKLQTSCS 459 (892)
Q Consensus 432 ~~~~~~~l~~vt~~~i~~~~~~~l~~~~ 459 (892)
...+...|++|++.||++++++++..+-
T Consensus 385 ~d~~i~~id~Vt~sdV~~a~kk~~s~kl 412 (429)
T KOG2583|consen 385 PDAFIQQIDKVTASDVQKAAKKFLSGKL 412 (429)
T ss_pred hHHHHHHhccccHHHHHHHHHHhccCcc
Confidence 1234567999999999999999875543
No 19
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.2e-25 Score=244.53 Aligned_cols=347 Identities=12% Similarity=0.135 Sum_probs=270.0
Q ss_pred CCCeEEEEecCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHH-HHHHHcCceEEE
Q 002687 521 NLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAGKRVEG 599 (892)
Q Consensus 521 ~~~~~~~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~~g~~~ 599 (892)
...++.++|+||+++.+..++..........+..|...++.+..|+||+++||++ +|+++|+... +..+|..+||+.
T Consensus 21 ~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlf--mGseKYP~~~~f~~fLskhgGs~ 98 (937)
T COG1025 21 DRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLF--MGSEKYPDEGGFSEFLSKHGGSH 98 (937)
T ss_pred CcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHH--hcCccCCCccchHHHHHHcCCcc
Confidence 3457789999999999999988775333333444666555577999999999999 9999998866 999999999999
Q ss_pred EEeecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCC
Q 002687 600 GTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFR 679 (892)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (892)
|++|..+.|.|++.+.++.|+.+++.+++++.+|.| +++..++|+..+.+|+.+...+.++++++.....+-++||+.+
T Consensus 99 NA~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf-~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~sr 177 (937)
T COG1025 99 NASTAGERTAFYFEVENDALEGALDRFADFFIEPLF-NKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSK 177 (937)
T ss_pred ccccCCCceeEEEEecHHHHHHHHHHHHHHHhcccc-ChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccc
Confidence 999999999999999999999999999999999998 8999999999999999999999999999999888989999998
Q ss_pred CC--Chhhhhc----CChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCcc
Q 002687 680 PI--RISDLQK----VDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFT 753 (892)
Q Consensus 680 ~~--~~~~l~~----l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 753 (892)
+. +.++|.. ...++++.||++ +|.+++|+++|.|+-+.+++.+++.++||.+|........ . +.++.
T Consensus 178 Fs~GN~~TL~~~p~~~v~~el~ef~~~-~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~-----~-p~p~~ 250 (937)
T COG1025 178 FSTGNLETLSDKPGLVVQQELKEFHEK-HYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPP-----I-PVPVV 250 (937)
T ss_pred cCCCChhhhccCCCchHHHHHHHHHHH-hcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCC-----C-CCCCC
Confidence 87 5666655 457899999987 8899999999999999999999999999999977654411 1 11211
Q ss_pred CCCcceeeEEeCCCCCcceEEEEEEeccCCCCcch--HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCC
Q 002687 754 FPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMV--EEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHS 831 (892)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~ 831 (892)
.+..... ++......+...+.+.|+++.....+. ...+...++|.-=..-|-..|. ++||+-++.+......
T Consensus 251 ~d~~t~~-ii~i~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk-~~Glit~l~a~~~~~~---- 324 (937)
T COG1025 251 TDEQTGK-IIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLK-KQGLITELSAGLDPIS---- 324 (937)
T ss_pred ChHHhCc-eEEeccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHH-hccchhhhcccccccc----
Confidence 2222222 233333346678888999866554431 1233444554422334555665 6799999988765321
Q ss_pred CCCCcceeEEEEEEeCc---ccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 002687 832 RTGDVRGDISINFSCDP---EISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAH 886 (892)
Q Consensus 832 ~~~~~~g~~~i~~~~~p---~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~ 886 (892)
+ +.|.|.|....+. .+.+++|..+...|+-+.+.++....++....-.-..+
T Consensus 325 --~-n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f 379 (937)
T COG1025 325 --G-NYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDF 379 (937)
T ss_pred --C-CcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhh
Confidence 2 4778888877643 47788999999999999998999888887665554433
No 20
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.6e-24 Score=239.14 Aligned_cols=329 Identities=15% Similarity=0.144 Sum_probs=261.0
Q ss_pred CeEEEEecCCcEEEEeeCCCCCCeEEEEE-EecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHH-HHHHHcCceEEEE
Q 002687 523 GATELVLSNGMRVCYKCTDFLDDQVLFTG-FSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAGKRVEGG 600 (892)
Q Consensus 523 ~~~~~~L~NG~~v~~~~~~~~~~~v~~~~-~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~~g~~~~ 600 (892)
..+.++|+||+++++..++.... .+..+ +..|+..++.+..|+||+++||+| +|+.+|+.+. +.+++..+||+-|
T Consensus 27 ~yr~~~L~Ngl~alLisDp~tD~-ssaal~V~vGS~~DP~dl~GLAHF~EHMlF--mGS~KYP~En~y~~~lsk~gGssN 103 (974)
T KOG0959|consen 27 EYRGIELTNGLRALLISDPKTDK-SSAALDVKVGSFSDPEDLQGLAHFCEHMLF--MGSEKYPDENEYSKFLSKNGGSSN 103 (974)
T ss_pred ceeEEEecCCceEEEecCCCCCc-cceeeeeeccccCCccccccHHHHHHHHHh--hccccCCCcchhHHHHHhcCCccc
Confidence 67889999999999999875443 44444 566888888889999999999999 9999998554 8999999999999
Q ss_pred EeecceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCC
Q 002687 601 TKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRP 680 (892)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (892)
|+|+.+.|.|.+.+..++|+.+|+.+++++..|.| ++++.++++..+.+|.+++..+..++..+..+.+.-++||++++
T Consensus 104 A~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf-~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF 182 (974)
T KOG0959|consen 104 AYTDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLF-NKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKF 182 (974)
T ss_pred cccccccceEEEecchHHHHHHHHHHHHHhhCccc-ChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhc
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999998
Q ss_pred C--ChhhhhcCC-----hHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCcc
Q 002687 681 I--RISDLQKVD-----PLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFT 753 (892)
Q Consensus 681 ~--~~~~l~~l~-----~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 753 (892)
. ..+.|.... .++|.+||++ ||.+++|+++|+|+.+.+.+..++.+.|+.+++...+.+.+ ...+ .
T Consensus 183 ~tGN~~tL~~~p~~~~~r~~L~kF~k~-~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f-----~~~p-~ 255 (974)
T KOG0959|consen 183 STGNKKTLLEGPREIDLRDELLKFYKN-WYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVF-----PEPP-F 255 (974)
T ss_pred cccchhhhhhccccchHHHHHHHHHHh-hcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcc-----cCCC-C
Confidence 7 678888777 8999999998 88999999999999999999999999999999887766322 2111 1
Q ss_pred CCCcceeeEEeCCCCCcceEEEEEEeccCCCCcc--hHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCC
Q 002687 754 FPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTM--VEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHS 831 (892)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~ 831 (892)
.+ ......+...+......+.+.|+.+.....| .+..+...++|.--.+-|...|| ++||+-+..+......
T Consensus 256 ~~-e~~~~~~~v~pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk-~~gw~~sl~a~~~~~a---- 329 (974)
T KOG0959|consen 256 LP-EELKKLVRVVPIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLK-RLGWATSLEAGIPEFA---- 329 (974)
T ss_pred Ch-HHhCcEEEEEeccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHH-HhhchheeecCCCccc----
Confidence 11 1122233322334455777888886544333 22344455555544567888998 5799988887765211
Q ss_pred CCCCcceeEEEEEEeCc---ccHHHHHHHHHHHHHHHHhCCCC
Q 002687 832 RTGDVRGDISINFSCDP---EISFKLVDLALDEISRLQKEGPS 871 (892)
Q Consensus 832 ~~~~~~g~~~i~~~~~p---~~~~~~~~~~~~~l~~l~~~~is 871 (892)
.+.+.|.|.+..+. +++++++..+...+.-++..+.-
T Consensus 330 ---s~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~ 369 (974)
T KOG0959|consen 330 ---SGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPE 369 (974)
T ss_pred ---cccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCch
Confidence 13567888877654 47788899999998877765444
No 21
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.88 E-value=1.9e-22 Score=186.78 Aligned_cols=147 Identities=28% Similarity=0.419 Sum_probs=133.3
Q ss_pred EEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCccccccCCceEE
Q 002687 48 FYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVY 127 (892)
Q Consensus 48 ~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~na~t~~d~t~y 127 (892)
||++.+++... .+++.++|++|+++|+.++.|+||+++||+++||.+++..++.+.++.+|+.+ |+.|+.|+|.|
T Consensus 1 ~V~~~~~~~~~-~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~----~~~t~~d~t~~ 75 (149)
T PF00675_consen 1 KVVLVEDPGSP-VVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASF----NASTSRDSTSY 75 (149)
T ss_dssp EEEEEESTTSS-EEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEE----EEEEESSEEEE
T ss_pred CEEEEEcCCCC-EEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhcccc----ceEecccceEE
Confidence 68888886533 69999999999999999999999999999999999999999999999998776 99999999999
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCcc-cchHHHHHHHHccCCCCCCCCCCCC
Q 002687 128 ELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS-GRMQDAHWVLMMEGSKYAECLPIGL 203 (892)
Q Consensus 128 ~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~l~~er~~v~~e~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~ 203 (892)
.+++++++ ++.+|++|++++.+|.|++++++++|+.+..|++....++ ..+.+.+.+.+|.++||+ ++..|+
T Consensus 76 ~~~~~~~~---~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~-~~~~~~ 148 (149)
T PF00675_consen 76 SASVLSED---LEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYG-NPLLGP 148 (149)
T ss_dssp EEEEEGGG---HHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGG-SHSS-T
T ss_pred EEEEeccc---chhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCC-CCCCCC
Confidence 99999765 9999999999999999999999999999999999887765 567889999999999999 788775
No 22
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.87 E-value=1e-21 Score=190.99 Aligned_cols=181 Identities=25% Similarity=0.368 Sum_probs=146.6
Q ss_pred CCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCC---CCCCCCCCCCCCCCCCceEEeecCCCCc
Q 002687 209 TVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSAT---DPPVIPKFPVPSHQEPRFSCFIESEAGG 285 (892)
Q Consensus 209 ~~t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (892)
++|.++|++||++||+|+||+++|+||+ ++++++++|+++|+.|+... .+........+................+
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~-~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDI-DPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQ 79 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESS-GHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCc-cHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccccccc
Confidence 5799999999999999999999999999 99999999999999998753 1111111111111122222333333479
Q ss_pred eEEEEEEecCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeecccCcccccccEEEEEEEecCCcHHHHH
Q 002687 286 SAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKAL 365 (892)
Q Consensus 286 ~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (892)
+.+.++|..++. .+..+..++.++..+|++.+.++|+..+|++.+++|+++++...+ .+.++|.+.+.+.++++.+++
T Consensus 80 ~~v~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~-~~~~~~~i~~~~~~~~~~~~~ 157 (184)
T PF05193_consen 80 SIVSIAFPGPPI-KDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSY-RDSGLFSISFQVTPENLDEAI 157 (184)
T ss_dssp EEEEEEEEEEET-GTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEE-SSEEEEEEEEEEEGGGHHHHH
T ss_pred cccccccccccc-cccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeecc-ccceEEEEEEEcCcccHHHHH
Confidence 999999998865 257889999999999999999999999999999999999996544 588999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 002687 366 ESMLIEVARVRLHGFSEREVSVARALL 392 (892)
Q Consensus 366 ~~i~~~l~~l~~~g~~~~el~~ak~~~ 392 (892)
+.+.++|++++++|++++||+++|+++
T Consensus 158 ~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 158 EAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 999999999999999999999999874
No 23
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.82 E-value=2.5e-18 Score=190.30 Aligned_cols=345 Identities=13% Similarity=0.095 Sum_probs=251.6
Q ss_pred EecCCCeEEEEe---cCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHH-HHHHHc
Q 002687 518 EYENLGATELVL---SNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLA 593 (892)
Q Consensus 518 ~~~~~~~~~~~L---~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~ 593 (892)
..|+...+-+.+ ..|+++.+..++......++. + .....+..|++|.|+|+++ +|+.+|+..+ +...+.
T Consensus 13 ~lpE~~~~~~~~~H~~TGa~l~hi~~~d~~~vFsi~--F---~T~p~dstGVaHiLEHtvl--cGS~kYPvkdPF~~ml~ 85 (978)
T COG1026 13 DLPEISSKGYILEHEKTGAELAHIKNEDPNNVFSIA--F---KTEPHDSTGVAHILEHTVL--CGSKKYPVKDPFFKMLK 85 (978)
T ss_pred cchhccceeEEEeeccCCceEEEecCCCcCceEEEE--e---ecCCCCCCCcchHHHHHhh--hCCCCCCCCChHHHHHH
Confidence 334444444444 379999998877555434443 2 2355678999999999999 9999999988 566666
Q ss_pred Cc-eEEEEEeecceeEEEEEec-ChhhHHHHHHHHHHHhcCCCCCCHHHHHHH--------------HHHHHHHHHHhhc
Q 002687 594 GK-RVEGGTKVGAYMRTFSGDC-SPSDLETALQLVYQLFTTNVAPGEEEVEIV--------------MQMAEEVIRAQER 657 (892)
Q Consensus 594 ~~-g~~~~~~~~~~~~~~~~~~-~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~--------------~~~~~~~~~~~~~ 657 (892)
+- +--+||+|..+.|.|-+++ ..+++-.+|.+..+.+++|.. +++.|.++ +.++..|++....
T Consensus 86 rSLntF~NA~T~~D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL-~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~s 164 (978)
T COG1026 86 RSLNTFLNAFTFPDKTVYPASSANEKDFYNLLSVYLDAVFHPLL-TKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYS 164 (978)
T ss_pred HhHHHHHhhccCCCcceeeccccCcchHHHHHHHHHHhhhCccc-chHHHhhhhhccccCCCccceeeeEEeehhccccc
Confidence 53 4449999999999999875 557899999999999999977 79898876 4578899999999
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCCC--ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHh-hccCCC
Q 002687 658 DPYTAFANRVKEINYGNSYFFRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQY-LGGIPK 734 (892)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~-~~~l~~ 734 (892)
++..++++.+.+.+|++..|+... ....|..+|.+++++||++ +|.|+|+.++++||++.++..+.++.. +...+.
T Consensus 165 s~~~~~~~~~~~slfp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk-~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k 243 (978)
T COG1026 165 SGESVLSRAMQQSLFPGTTYGVNSGGDPKNIPDLTYEEFRAFHKK-HYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGK 243 (978)
T ss_pred CchhHHHHHHHHhhCCCccccccCCCCcccccccCHHHHHHHHHH-hCCccceEEEEECCCCHHHHHHHHHHhhhccccc
Confidence 999999999999999987776554 7889999999999999998 889999999999999999999999876 555544
Q ss_pred CCCCCCccCcCCCCCCC-ccCCCcceeeEEe--CCCCCcceEEEEEEeccCCCCcchHHHHHHHHHHHHH----HHHHHH
Q 002687 735 PPEPILHFNRDNLKGLP-FTFPSSIIREVVR--SPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLL----ETKMMQ 807 (892)
Q Consensus 735 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l----~s~L~~ 807 (892)
..... ++++.. +..+.......-. ...+..+..+.+.|-++.... ....+++.+|..+| .+.|.+
T Consensus 244 ~~~~~------~i~~~~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~~~d--~~~~lal~vL~~iLl~~~asPl~~ 315 (978)
T COG1026 244 RELDV------PIPDQKAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSASD--AEDSLALEVLEEILLDSAASPLTQ 315 (978)
T ss_pred cccCC------CCCcccccCcccccceeeccCCCCCCCceeEEEEEEecCCccc--HHHHHHHHHHHHHHccCcccHHHH
Confidence 33111 111111 1122111111111 122345666666777644332 44566778888777 578999
Q ss_pred HHhhhcCCe-eeeeEEeeccCCCCCCCCCcceeEEEEE-EeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 002687 808 VLRFKHGQI-YSASVSVFLGGNKHSRTGDVRGDISINF-SCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRA 885 (892)
Q Consensus 808 ~lRe~~gl~-Y~~~~~~~~~~~~~~~~~~~~g~~~i~~-~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~ 885 (892)
.|-| -|++ +.+...+.... -...|.+.+ +++.+++++.-+.+.++|+++.+.+++.+.++.++.++.-+
T Consensus 316 ~lie-sglg~~~~~g~~~~~~--------~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s 386 (978)
T COG1026 316 ALIE-SGLGFADVSGSYDSDL--------KETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFS 386 (978)
T ss_pred HHHH-cCCCcccccceecccc--------ceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Confidence 9986 4666 33322222100 244566655 45778999999999999999999999999999999988877
Q ss_pred hhh
Q 002687 886 HET 888 (892)
Q Consensus 886 ~~~ 888 (892)
+++
T Consensus 387 ~ke 389 (978)
T COG1026 387 LKE 389 (978)
T ss_pred hhh
Confidence 665
No 24
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.80 E-value=1.2e-18 Score=169.21 Aligned_cols=179 Identities=27% Similarity=0.364 Sum_probs=136.2
Q ss_pred cCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCC---CCCCccCcCCCCCCCccCCCcceeeEEe
Q 002687 688 KVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPP---EPILHFNRDNLKGLPFTFPSSIIREVVR 764 (892)
Q Consensus 688 ~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (892)
++|.++|++||++ ||.|+|++++|+||++.+++.++++++|+.|+... ... ....+. .........++.
T Consensus 1 ~it~e~l~~f~~~-~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~ 72 (184)
T PF05193_consen 1 NITLEDLRAFYKK-FYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPK-----PRSPPL--PPSEPQGKEIVI 72 (184)
T ss_dssp C--HHHHHHHHHH-HSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSS-----CSSSSS--SCGGSSEEEEEE
T ss_pred CCCHHHHHHHHHH-hcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccccc-----cccccc--cccccccccccc
Confidence 4789999999998 88999999999999999999999999999999764 111 001111 111122233333
Q ss_pred CCCCCcceEEEEEEeccC--CCCcchHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCcceeEEE
Q 002687 765 SPMVEAQCSVQLCFPVEL--KNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISI 842 (892)
Q Consensus 765 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i 842 (892)
.....++..+.++|+++. .+.+.....++..+|++.+.++|+..||++.+++|+++++..... ..|.|.+
T Consensus 73 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~--------~~~~~~i 144 (184)
T PF05193_consen 73 PSKDESQSIVSIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYR--------DSGLFSI 144 (184)
T ss_dssp EESSSSSEEEEEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEES--------SEEEEEE
T ss_pred ccccccccccccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccc--------cceEEEE
Confidence 333337888889998843 345555555666667777777899999999999999999966432 4788999
Q ss_pred EEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 002687 843 NFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELE 882 (892)
Q Consensus 843 ~~~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~ 882 (892)
.+.++|++++++++.+.++++++.++|++++||+++|..|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 145 SFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred EEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 9999999999999999999999999899999999999875
No 25
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=9.3e-16 Score=160.15 Aligned_cols=333 Identities=13% Similarity=0.086 Sum_probs=242.7
Q ss_pred cCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHH-HHHHHcCc-eEEEEEeeccee
Q 002687 530 SNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAGK-RVEGGTKVGAYM 607 (892)
Q Consensus 530 ~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~~-g~~~~~~~~~~~ 607 (892)
.-|.+++.......++..++. |. ...++..|+.|.|+|.++ +|+.+|+-.+ +-+.|.+- ..-+|++|.-++
T Consensus 60 ~Tgae~lhl~reD~N~vFsI~-Fr----Tpp~dstGiPHILEHtvL--CGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~ 132 (998)
T KOG2019|consen 60 KTGAEVLHLDREDENNVFSIV-FR----TPPKDSTGIPHILEHTVL--CGSRKYPVRDPFFKMLNRSLATFMNAFTAPDY 132 (998)
T ss_pred CCCceeEeeccCCCCceeEEE-ee----cCCCccCCCchhhhhhee--eccCcCcccChHHHHHHHHHHHHHhhccCCCc
Confidence 458999988776666544443 33 344577899999999999 9999999877 77777753 445899999999
Q ss_pred EEEEEec-ChhhHHHHHHHHHHHhcCCCCCCHHHHHHH------------------HHHHHHHHHHhhcChHHHHHHHHH
Q 002687 608 RTFSGDC-SPSDLETALQLVYQLFTTNVAPGEEEVEIV------------------MQMAEEVIRAQERDPYTAFANRVK 668 (892)
Q Consensus 608 ~~~~~~~-~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 668 (892)
|-|-+.+ ..+++..+.++..+....|.. -+..|.++ +.++..|++..-.+|.+.++..+.
T Consensus 133 T~yPfattN~kDf~NL~dVYLDAtffPkl-r~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Q 211 (998)
T KOG2019|consen 133 TFYPFATTNTKDFYNLRDVYLDATFFPKL-RKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQ 211 (998)
T ss_pred ceeecccCChHHHHHHHHHhhhcccchHH-HhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHH
Confidence 9888764 668999999999998888876 46666654 568889999999999999999999
Q ss_pred HHhcCCCCCCCCC--ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCC
Q 002687 669 EINYGNSYFFRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDN 746 (892)
Q Consensus 669 ~~~~~~~~~~~~~--~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 746 (892)
+.+|+++.|+-.. +..+|..++++++++||++ +|+|+|..+..+||+..++...+++.-|+......... .
T Consensus 212 q~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~-~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~------k 284 (998)
T KOG2019|consen 212 QALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQ-HYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSS------K 284 (998)
T ss_pred HhhCccccccccCCCCcccCccccHHHHHHHHHh-ccCCCcceeEeecCchHHHHHHHHHHhhcccccccccC------c
Confidence 9999988877665 7888999999999999998 89999999999999999999888887776554332211 0
Q ss_pred CCC-CCccCCCcceeeEEeCC---C--CCcceEEEEEEeccCCCCcchHHHHHHHHHHHHH----HHHHHHHHhhhcCCe
Q 002687 747 LKG-LPFTFPSSIIREVVRSP---M--VEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLL----ETKMMQVLRFKHGQI 816 (892)
Q Consensus 747 ~~~-~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l----~s~L~~~lRe~~gl~ 816 (892)
... ..+..| ...+...+ + ...+..+.+.|-.+.+.. ...++++.+|+.++ +|.+++.|-| -|++
T Consensus 285 v~~qk~f~kp---~rvve~~p~d~~~~p~Kq~~~s~s~L~~~p~d--~~etfaL~~L~~Ll~~gpsSp~yk~LiE-SGLG 358 (998)
T KOG2019|consen 285 VTFQKLFDKP---RRVVEKGPADPGDLPKKQTKCSNSFLSNDPLD--TYETFALKVLSHLLLDGPSSPFYKALIE-SGLG 358 (998)
T ss_pred cccccccccC---ceeeeecCCCCCCCccceeEEEEEeecCCchh--HHHHHHHHHHHHHhcCCCccHHHHHHHH-cCCC
Confidence 110 111111 11111111 1 123555555565544332 34567778888876 7899999987 4666
Q ss_pred eeeeEEeeccCCCCCCCCCcceeEEEEEEe-CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhhh
Q 002687 817 YSASVSVFLGGNKHSRTGDVRGDISINFSC-DPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETG 889 (892)
Q Consensus 817 Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~~~~ 889 (892)
-...+...+... . -.+.|++.... ..++++.+.+.+.++++.+.+.+++.+.++.....+--++.++
T Consensus 359 tEfsvnsG~~~~-----t-~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~q 426 (998)
T KOG2019|consen 359 TEFSVNSGYEDT-----T-LQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQ 426 (998)
T ss_pred cccccCCCCCcc-----c-ccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhcc
Confidence 444444433221 1 35678888865 5678999999999999999999999999888777766655543
No 26
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.63 E-value=4.7e-15 Score=137.20 Aligned_cols=144 Identities=16% Similarity=0.123 Sum_probs=131.9
Q ss_pred EEEEeeCCCCCCeEEEEEEecCcCCCCC-cchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecceeEEEEE
Q 002687 534 RVCYKCTDFLDDQVLFTGFSYGGLSELP-ESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSG 612 (892)
Q Consensus 534 ~v~~~~~~~~~~~v~~~~~~~gg~~~~~-~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~ 612 (892)
||++.+++..+ .+.+.+++.+|....+ ...|++|+++++++ .|+.+++..++.+.++..|+.+++.++.+++.|.+
T Consensus 1 ~V~~~~~~~~~-~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~--~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~ 77 (149)
T PF00675_consen 1 KVVLVEDPGSP-VVSVSLVFKAGSRYEPPGKPGLAHLLEHLLF--RGSKKYSSDELQEELESLGASFNASTSRDSTSYSA 77 (149)
T ss_dssp EEEEEESTTSS-EEEEEEEES-SGGGSCTTTTTHHHHHHHHTT--SBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEE
T ss_pred CEEEEEcCCCC-EEEEEEEEeeccCCCCCCCCchhhhhhhhcc--cccchhhhhhhHHHhhhhccccceEecccceEEEE
Confidence 68888887655 6999998886665554 67899999999999 79999999999999999999999999999999999
Q ss_pred ecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC
Q 002687 613 DCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (892)
Q Consensus 613 ~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (892)
++++++++.+|+++.+++.+|.| +++.|++++..+..+++....+|...+.+.+.+.+|.++||+++.
T Consensus 78 ~~~~~~~~~~l~~l~~~~~~P~f-~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~ 145 (149)
T PF00675_consen 78 SVLSEDLEKALELLADMLFNPSF-DEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPL 145 (149)
T ss_dssp EEEGGGHHHHHHHHHHHHHSBGG-CHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHS
T ss_pred EEecccchhHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCC
Confidence 99999999999999999999999 899999999999999999999999999999999999999998864
No 27
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.62 E-value=7.5e-13 Score=130.89 Aligned_cols=330 Identities=14% Similarity=0.077 Sum_probs=226.2
Q ss_pred EEEecCCcEEEEeeCCCCCCeEEEEE-EecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeec
Q 002687 526 ELVLSNGMRVCYKCTDFLDDQVLFTG-FSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVG 604 (892)
Q Consensus 526 ~~~L~NG~~v~~~~~~~~~~~v~~~~-~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~ 604 (892)
.-+|.||++|.-.+.+..- -.+.+ +..|++++..++.|++|++..... ..|.+++...+-..++..|+.++...+
T Consensus 25 ~~kl~ngL~Vas~e~~~~i--s~l~l~~~AGSRYe~~~~~G~sHllr~f~g--~~Tq~~sal~ivr~se~~GG~Lss~~t 100 (429)
T KOG2583|consen 25 TTKLVNGLTVASREAPTAI--SSLSLAFRAGSRYEPADQQGLSHLLRNFVG--RDTQERSALKIVRESEQLGGTLSSTAT 100 (429)
T ss_pred hhccccceEEEeccCCCcc--eEEEEEEecCccCCccccccHHHHHHHhcc--cCccccchhhhhhhhHhhCceeeeeee
Confidence 3478999999988776543 44444 555777777788999999976655 789999999999999999999999999
Q ss_pred ceeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHhhcChHHHHHHHHHHHhcCCCCCCCCC--
Q 002687 605 AYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVM-QMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI-- 681 (892)
Q Consensus 605 ~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 681 (892)
.+.+.++.+++.++++-.+.+|.+.+..|.| -+.+++.+. ..+.. .....+|.....+.+++..|.+ ..+.++
T Consensus 101 Re~~~~tvt~lrd~~~~~l~~L~~V~~~paF-kPwEl~D~~~~ti~~--~l~~~t~~~~a~e~lH~aAfRn-gLgnslY~ 176 (429)
T KOG2583|consen 101 RELIGLTVTFLRDDLEYYLSLLGDVLDAPAF-KPWELEDVVLATIDA--DLAYQTPYTIAIEQLHAAAFRN-GLGNSLYS 176 (429)
T ss_pred cceEEEEEEEecccHHHHHHHHHHhhcccCc-CchhhhhhhhhhhHH--HhhhcChHHHHHHHHHHHHHhc-ccCCcccC
Confidence 9999999999999999999999999999999 699888777 33333 3456789999999999999977 455555
Q ss_pred ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCccCcCCCCCCCccCCCcceee
Q 002687 682 RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIRE 761 (892)
Q Consensus 682 ~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (892)
..-.+.+++.++|..|..+.| ...|+.++-+| ++.+.+....++++ .++.+.. .++.+..+..+..+
T Consensus 177 p~~~vg~vss~eL~~Fa~k~f-v~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~---------~k~a~a~~~gGe~R- 243 (429)
T KOG2583|consen 177 PGYQVGSVSSSELKDFAAKHF-VKGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLP---------LKPAPAKYSGGEAR- 243 (429)
T ss_pred CcccccCccHHHHHHHHHHHh-hccceEEEecC-CChHHHHHHHHHhc-cccCCCC---------CCCCCccccCCccc-
Confidence 334688999999999999966 56899877776 57888999888872 2222211 11122222222221
Q ss_pred EEeCCCCCcceEEEEEEeccCCCCcc---hHHHHHHHHHHHHHH----HHHHHHHhhhcCCeeeeeEEeeccCCCCCCCC
Q 002687 762 VVRSPMVEAQCSVQLCFPVELKNGTM---VEEINYVGFLSKLLE----TKMMQVLRFKHGQIYSASVSVFLGGNKHSRTG 834 (892)
Q Consensus 762 ~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~L~~~l~----s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~ 834 (892)
.........+.++-.+ ....+. ....+...+|+.... ..++.++-- ..+-|++.++.... .|.
T Consensus 244 ---k~~~g~~~~v~vageg-AAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~-~a~~~~~s~sA~~a-----~ys 313 (429)
T KOG2583|consen 244 ---KDARGNRVHVAVAGEG-AAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAG-AAGEQGASASAFNA-----PYS 313 (429)
T ss_pred ---cccCCceeEEEEecCc-ccccchHHHHHHHHHHHHHhcccccccccchHHHHHh-hccccCceeeeecc-----ccc
Confidence 1112233344333222 222221 222333344443331 234444432 22335555544432 244
Q ss_pred CcceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhh
Q 002687 835 DVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHE 887 (892)
Q Consensus 835 ~~~g~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~~ 887 (892)
..|.|++++..+-.++.++++...+.+...+..+++-...+.++..++..+.
T Consensus 314 -DsGL~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ 365 (429)
T KOG2583|consen 314 -DSGLFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYL 365 (429)
T ss_pred -CCceEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhh
Confidence 4899999998877778888888888887777778888877777776665443
No 28
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=8.1e-13 Score=138.33 Aligned_cols=336 Identities=15% Similarity=0.135 Sum_probs=217.8
Q ss_pred CCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcC-ceEEEEEeecceeEE
Q 002687 531 NGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAG-KRVEGGTKVGAYMRT 609 (892)
Q Consensus 531 NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~ 609 (892)
-|++|.....++. .+.-.+.+ ..+..+..|+.|.|+|++| ||+++|+...+...+.+ +-+..|++|+.++|.
T Consensus 28 Tkl~va~~~~pts--~vhG~f~v---~TEa~~d~G~PHTLEHL~F--MGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~ 100 (1022)
T KOG0961|consen 28 TKLRVAIGEVPTS--MVHGAFSV---VTEADSDDGLPHTLEHLVF--MGSKKYPFKGVLDVIANRCLADTNAWTDTDHTA 100 (1022)
T ss_pred cceEEEEeecCCc--ceeeeEEe---eeeecCCCCCchhHHHHhh--hccccCCcccHHHHhhcchhcccccccccCcce
Confidence 3788888766542 23333322 1244567899999999999 99999999997666664 456799999999999
Q ss_pred EEEecC-hhhHHHHHHHHHHHhcCCCCCCHHHHHHH----------HHHHHHHHHHhhcChHHHHHHHHHHHhcCCC-CC
Q 002687 610 FSGDCS-PSDLETALQLVYQLFTTNVAPGEEEVEIV----------MQMAEEVIRAQERDPYTAFANRVKEINYGNS-YF 677 (892)
Q Consensus 610 ~~~~~~-~~~l~~~l~ll~~~l~~p~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 677 (892)
|.+++. .+.+-++|....+-+..|.. +.++|-.+ ..++.+|++.....-...+.+..++.+|+.. +|
T Consensus 101 YtLStag~dGFlklLPvy~dHiL~P~L-tdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY 179 (1022)
T KOG0961|consen 101 YTLSTAGSDGFLKLLPVYIDHILTPML-TDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGY 179 (1022)
T ss_pred EEeecccccchHHHhHHHHHhhcCccc-chhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCc
Confidence 999864 46699999999999999988 78888766 4688999988888888888888899999864 44
Q ss_pred CCCC--ChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCCCc-cCcCCCCC--CCc
Q 002687 678 FRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILH-FNRDNLKG--LPF 752 (892)
Q Consensus 678 ~~~~--~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~-~~~~~~~~--~~~ 752 (892)
.... ..+.|+.+|.+++++||++ +|.++||+++|+|+++.+++....+.+-..++......++ +++ ++.. .+.
T Consensus 180 ~~eTGG~~knLR~lt~ekIR~yHK~-~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~r-Pf~~tn~~~ 257 (1022)
T KOG0961|consen 180 AVETGGRLKNLRELTLEKIRDYHKK-FYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPR-PFSFTNALS 257 (1022)
T ss_pred eeccCCChhhHHHhhHHHHHHHHHH-hccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCC-CcccccCcc
Confidence 3333 6788999999999999998 8899999999999999999988877665544332221111 111 1111 111
Q ss_pred cCCCcceeeEEeCC-CCCcceEEEEEEeccCCCCcchHHHHHHHHHHHHHH----HHHHHHHhh-hcCCeeeeeEEeecc
Q 002687 753 TFPSSIIREVVRSP-MVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLE----TKMMQVLRF-KHGQIYSASVSVFLG 826 (892)
Q Consensus 753 ~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l~----s~L~~~lRe-~~gl~Y~~~~~~~~~ 826 (892)
..+.. ....+..+ .++.+..+.++|.+.... |. .-..+..+|-..++ +.+-+.+-| +--++-+++......
T Consensus 258 ~i~e~-t~~tVefp~~Des~G~v~~aW~g~s~s-D~-~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~ 334 (1022)
T KOG0961|consen 258 DIKES-TVHTVEFPTDDESRGAVEVAWFGHSPS-DL-ETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEG 334 (1022)
T ss_pred cCCcc-ceeeeecCCcccccceEEEEEcCCCHH-Hh-hhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecc
Confidence 12221 12222222 245788888888874433 21 22334455555553 233333333 223444444443321
Q ss_pred CCCCCCCCCcceeEEEEEE-eCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhhhc
Q 002687 827 GNKHSRTGDVRGDISINFS-CDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGL 890 (892)
Q Consensus 827 ~~~~~~~~~~~g~~~i~~~-~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~~~~~~~~~~ 890 (892)
.+-.+.+.+. +..++++.+...+++.+.+ ...|+-+.+.....+-+-++.-++
T Consensus 335 ---------vrc~i~L~f~gVP~EKi~~~~~k~l~~l~e--t~~iDm~Rm~~~i~~t~~~yL~nl 388 (1022)
T KOG0961|consen 335 ---------VRCDIRLNFAGVPVEKIDECAPKFLDKLVE--TANIDMERMGYLIDQTILNYLVNL 388 (1022)
T ss_pred ---------cceeEEEeecCCcHHHhhhhhHHHHHHHHH--hcccCHHHHHHHHHHHHHHHHHhh
Confidence 1223344443 4557777777777766643 345777766655555555554444
No 29
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=98.64 E-value=6.4e-07 Score=89.89 Aligned_cols=130 Identities=13% Similarity=0.128 Sum_probs=93.5
Q ss_pred cCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecc----
Q 002687 530 SNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGA---- 605 (892)
Q Consensus 530 ~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~---- 605 (892)
.+|++|++++.++ ++++|+++.+.-+.-...+-.++. +...+++++||++++..++...+..+.|++++++..
T Consensus 76 ~~~~~v~~~~~~T-nGI~Y~~l~fdl~~l~~e~l~yl~--Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~ 152 (248)
T PF08367_consen 76 LGGIPVLFHEQPT-NGIVYVRLYFDLSDLPEEDLPYLP--LLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDY 152 (248)
T ss_dssp CTTCEEEEEE----TTEEEEEEEEE-TTS-CCCHCCHH--HHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEE
T ss_pred cCCccEEEEEcCC-CCeEEEEEEecCCCCCHHHHHhHH--HHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCC
Confidence 3789999998765 778999998864422222334444 345577779999999999999999887777766532
Q ss_pred -------eeEEEEEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHH
Q 002687 606 -------YMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTA 662 (892)
Q Consensus 606 -------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (892)
.++.+++.|+.++++++++++.+++.++.|.+.+.+.....+.+..+.+...+.+..
T Consensus 153 ~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~~~i~~~Gh~ 216 (248)
T PF08367_consen 153 DDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDMESSIISSGHS 216 (248)
T ss_dssp CTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred CCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 357899999999999999999999999999888888888888888877765544443
No 30
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=98.20 E-value=3.9e-05 Score=78.62 Aligned_cols=186 Identities=17% Similarity=0.217 Sum_probs=111.1
Q ss_pred EEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCccccc
Q 002687 41 GRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120 (892)
Q Consensus 41 ~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~na~t 120 (892)
..|+||+|+++-+.-.. -+.+++. +.|.-.+-.+--|+||||||++-. |+. .+++ .||+|
T Consensus 2 IvL~NGVRiFin~~M~K--DIYlGIs-~FGFe~DI~~iLGiAHLLEHILIs----FD~---~~F~----------ANAST 61 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKK--DIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS---SKFL----------ANAST 61 (590)
T ss_pred eEecCceEEEecCcccc--ceEEeec-ccccccchHHHHhHHHHHHHHeee----cch---HHhh----------cccch
Confidence 36999999988764322 1343332 356666666779999999999753 222 2333 29999
Q ss_pred cCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCC-----CChHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHccCCCC
Q 002687 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEVR-----VSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKY 195 (892)
Q Consensus 121 ~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~-----~~~~~l~~er~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 195 (892)
++.+..|......+. .--+++..|..|+++-. |+...++..-..+.+|+-=|. +-.--..++..|.+|.-|
T Consensus 62 aRsYMSFWC~si~g~--~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYFRn--EvfHCmDvLtfL~gGDLY 137 (590)
T PF03410_consen 62 ARSYMSFWCKSIRGR--TYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYFRN--EVFHCMDVLTFLGGGDLY 137 (590)
T ss_pred hhhhhhhhhhhccCC--ChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhhhh--hHHHHHHHHHHhcCCccc
Confidence 999999988655443 24567777777776532 455555444444444432111 111122234445667666
Q ss_pred CCCCCCCCHHHhcCCC--HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCC
Q 002687 196 AECLPIGLEKVIRTVS--SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATD 258 (892)
Q Consensus 196 ~~~~~~g~~~~i~~~t--~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~ 258 (892)
. +|-...+.+++ .+.|.+--++- ..-|.+++ |-.+ + +.++.++++.||.+|..+.
T Consensus 138 N----GGRi~ML~~l~~i~~mL~~RM~~I-~GpniVIF-Vk~l-~-~~~l~lL~~TFGtLP~cP~ 194 (590)
T PF03410_consen 138 N----GGRIDMLNNLNDIRNMLSNRMHRI-IGPNIVIF-VKEL-N-PNILSLLSNTFGTLPSCPL 194 (590)
T ss_pred C----CchHHHHhhhHHHHHHHHHHHHhh-cCCcEEEE-Eecc-C-HHHHHHHHHhcCCCCCCcc
Confidence 5 56666666654 23333333333 33355554 5557 7 6788999999999988544
No 31
>PHA03081 putative metalloprotease; Provisional
Probab=98.09 E-value=9.2e-05 Score=76.08 Aligned_cols=186 Identities=18% Similarity=0.221 Sum_probs=112.0
Q ss_pred EEeCCCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhccCCCCCCChhhHHHHHHHccCccCCCccccc
Q 002687 41 GRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120 (892)
Q Consensus 41 ~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~~~gt~~~~~~~l~~~l~~~g~~~g~~~na~t 120 (892)
..|+||+|+++.+.-.. -+.+++. +.|.-.+-.+--|+||++||++-. |+. .+++ .||.|
T Consensus 2 i~~~ngvr~f~~~~m~k--diy~gi~-~fgfe~di~~~lg~ahllehili~----fd~---~~f~----------anast 61 (595)
T PHA03081 2 IVLSNGVRIFINPSMKK--DIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS---SKFV----------ANAST 61 (595)
T ss_pred eEecCceEEEecCcccc--ceEEeec-ccccccchHHHHhHHHHHHHHeee----cch---HHhc----------ccchh
Confidence 36999999988764332 2343332 356666666778999999999753 222 2232 29999
Q ss_pred cCCceEEEEeCCCCCHHHHHHHHHHHHHhccCCC-----CChHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHccCCCC
Q 002687 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEVR-----VSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKY 195 (892)
Q Consensus 121 ~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~-----~~~~~l~~er~~v~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 195 (892)
++.+..|......+.. ..+++..+..|+++.. |+...++..-+.+.+|+-=|. +..--..++..|.+|.-|
T Consensus 62 ~r~ymsfwc~sirg~~--y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRn--EvfHCmDvLTfL~gGDLY 137 (595)
T PHA03081 62 ARSYMSFWCKSIRGRS--YIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRN--EVFHCMDVLTFLGGGDLY 137 (595)
T ss_pred hhhhHhHhhHhhcCCc--hHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhh--hhHHHHHHHHHhcCCccc
Confidence 9999988876555442 4578888999988775 444444444444444432111 111122234455667666
Q ss_pred CCCCCCCCHHHhcCCC--HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCC
Q 002687 196 AECLPIGLEKVIRTVS--SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATD 258 (892)
Q Consensus 196 ~~~~~~g~~~~i~~~t--~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~ 258 (892)
. +|-...+.+++ .+-|.+--++- ..-|.++ .|-.+ + +.+..++++.||.+|..+.
T Consensus 138 N----GGRi~ML~~l~~i~~~L~~RM~~I-~GpniVI-FVk~l-n-~~~l~lL~~TFGtLP~~P~ 194 (595)
T PHA03081 138 N----GGRIDMLDNLNDVRDMLSNRMHRI-SGPNIVI-FVKEL-N-PNTLSLLNNTFGTLPSCPE 194 (595)
T ss_pred C----CchHHHHhhhHHHHHHHHHHHHhh-cCCcEEE-EEecc-C-HHHHHHHHHhcCCCCCCcc
Confidence 5 56666666654 22222222222 3335554 45557 7 6788999999999988543
No 32
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=96.62 E-value=0.057 Score=56.29 Aligned_cols=184 Identities=13% Similarity=0.193 Sum_probs=97.3
Q ss_pred EEecCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecce
Q 002687 527 LVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAY 606 (892)
Q Consensus 527 ~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~ 606 (892)
+.|+||+||.+.+.- .++ +++.+...|-..+.++-.|+||+|+|.+. .++...+ + -||+|...
T Consensus 2 IvL~NGVRiFin~~M-~KD-IYlGIs~FGFe~DI~~iLGiAHLLEHILI------sFD~~~F---~------ANASTaRs 64 (590)
T PF03410_consen 2 IVLSNGVRIFINPSM-KKD-IYLGISNFGFENDIGEILGIAHLLEHILI------SFDSSKF---L------ANASTARS 64 (590)
T ss_pred eEecCceEEEecCcc-ccc-eEEeecccccccchHHHHhHHHHHHHHee------ecchHHh---h------cccchhhh
Confidence 579999999887654 343 89877655555666677899999999988 3443322 1 24555555
Q ss_pred eEEEEEec-----ChhhHHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCC
Q 002687 607 MRTFSGDC-----SPSDLETALQLVYQLFTTNV----APGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYF 677 (892)
Q Consensus 607 ~~~~~~~~-----~~~~l~~~l~ll~~~l~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (892)
+..|=+.+ ..+.+.++.+|+-+ +.. | +...++.....+..|+ +-.+--...++.+ ..+.|++-|
T Consensus 65 YMSFWC~si~g~~~~DAvrtliSWFF~---~g~Lk~~F-~~~~i~~hikELENEY--YFRnEvfHCmDvL-tfL~gGDLY 137 (590)
T PF03410_consen 65 YMSFWCKSIRGRTYIDAVRTLISWFFD---NGKLKDNF-SRSKIKNHIKELENEY--YFRNEVFHCMDVL-TFLGGGDLY 137 (590)
T ss_pred hhhhhhhhccCCChhHHHHHHHHHhhc---CCcccccc-cHhHHHHHHHHHhhhh--hhhhhHHHHHHHH-HHhcCCccc
Confidence 54433322 23344455555433 222 3 3333333333333332 1222223334443 344455443
Q ss_pred --CCCCChhhhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCC
Q 002687 678 --FRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPI 739 (892)
Q Consensus 678 --~~~~~~~~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~ 739 (892)
++....+.+..+ .+-|..--++ ... .|++++| -.++ +.+..++++.||+||.-|...
T Consensus 138 NGGRi~ML~~l~~i-~~mL~~RM~~-I~G-pniVIFV-k~l~-~~~l~lL~~TFGtLP~cP~~I 196 (590)
T PF03410_consen 138 NGGRIDMLNNLNDI-RNMLSNRMHR-IIG-PNIVIFV-KELN-PNILSLLSNTFGTLPSCPLTI 196 (590)
T ss_pred CCchHHHHhhhHHH-HHHHHHHHHh-hcC-CcEEEEE-eccC-HHHHHHHHHhcCCCCCCcccc
Confidence 222122222222 1122222333 434 4666655 3344 678899999999999876543
No 33
>PHA03081 putative metalloprotease; Provisional
Probab=95.67 E-value=0.22 Score=52.19 Aligned_cols=185 Identities=14% Similarity=0.241 Sum_probs=93.4
Q ss_pred EEecCCcEEEEeeCCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHhhhhcCCCCCCHHHHHHHHcCceEEEEEeecce
Q 002687 527 LVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAY 606 (892)
Q Consensus 527 ~~L~NG~~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~ 606 (892)
+.|+||+|+.+.+.-. + .+++.+...|-..+..+-.|++|+++|.+. .++...+ + .|++|...
T Consensus 2 i~~~ngvr~f~~~~m~-k-diy~gi~~fgfe~di~~~lg~ahllehili------~fd~~~f---~------anast~r~ 64 (595)
T PHA03081 2 IVLSNGVRIFINPSMK-K-DIYLGISNFGFENDIGEILGIAHLLEHILI------SFDSSKF---V------ANASTARS 64 (595)
T ss_pred eEecCceEEEecCccc-c-ceEEeecccccccchHHHHhHHHHHHHHee------ecchHHh---c------ccchhhhh
Confidence 5799999998887543 4 388876555555566677899999999987 3432221 1 23444444
Q ss_pred eEEE-----EEecChhhHHHHHHHHHHHhcCCCCCCHHHHHHH-HHHHHHHHHHh--hcChHHHHHHHHHHHhcCCCCCC
Q 002687 607 MRTF-----SGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIV-MQMAEEVIRAQ--ERDPYTAFANRVKEINYGNSYFF 678 (892)
Q Consensus 607 ~~~~-----~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 678 (892)
+..+ .+....+.+.++.+|+ +.+ ... ...|.+. .+.-+.|+++. -.+-....++.+ ..+.|++-|.
T Consensus 65 ymsfwc~sirg~~y~DAvrtliSWF---F~~-~~L-r~~F~~~~ik~~ikELENEYYFRnEvfHCmDvL-TfL~gGDLYN 138 (595)
T PHA03081 65 YMSFWCKSIRGRSYIDAIRTLISWF---FDN-GKL-KDNFSLSKIRNHIKELENEYYFRNEVFHCMDVL-TFLGGGDLYN 138 (595)
T ss_pred hHhHhhHhhcCCchHHHHHHHHHHh---ccC-Ccc-ccccchhhHHHHHHHHhhhhhhhhhhHHHHHHH-HHhcCCcccC
Confidence 4332 3322233444444443 322 221 2222221 12222233331 122222334443 4445554432
Q ss_pred CCCChhhhhcCC-hHH-HHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHhhccCCCCCCCC
Q 002687 679 RPIRISDLQKVD-PLK-ACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPI 739 (892)
Q Consensus 679 ~~~~~~~l~~l~-~~~-l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~~~~l~~~~~~~ 739 (892)
-= ....|.+++ ..+ |..--++ ... .|++|+| -.++ +.+..++++.||+||.-|...
T Consensus 139 GG-Ri~ML~~l~~i~~~L~~RM~~-I~G-pniVIFV-k~ln-~~~l~lL~~TFGtLP~~P~~I 196 (595)
T PHA03081 139 GG-RIDMLDNLNDVRDMLSNRMHR-ISG-PNIVIFV-KELN-PNTLSLLNNTFGTLPSCPETI 196 (595)
T ss_pred Cc-hHHHHhhhHHHHHHHHHHHHh-hcC-CcEEEEE-eccC-HHHHHHHHHhcCCCCCCcccc
Confidence 11 223333331 112 2222222 434 4566555 3444 678899999999999876543
No 34
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=95.66 E-value=0.055 Score=54.45 Aligned_cols=109 Identities=15% Similarity=0.114 Sum_probs=69.8
Q ss_pred CCcEEEEeeCCCCCceEEEEEEEcccCCCCCCCCCchhHHHHhhc-cCCCCCCChhhHHHHHHHccCccCCCccccccC-
Q 002687 45 NGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLA-FSATEKYTNHDIIKFLESIGAEFGACQNAVTSA- 122 (892)
Q Consensus 45 NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahlleh~~-~~gt~~~~~~~l~~~l~~~g~~~g~~~na~t~~- 122 (892)
+|.+|++.+.+. .+.+.+++.|..+.+.+. + --+.-++..++ ..||++++..++...+...-+.++..+..+++.
T Consensus 77 ~~~~v~~~~~~T-nGI~Y~~l~fdl~~l~~e-~-l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~~ 153 (248)
T PF08367_consen 77 GGIPVLFHEQPT-NGIVYVRLYFDLSDLPEE-D-LPYLPLLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDYD 153 (248)
T ss_dssp TTCEEEEEE----TTEEEEEEEEE-TTS-CC-C-HCCHHHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEEC
T ss_pred CCccEEEEEcCC-CCeEEEEEEecCCCCCHH-H-HHhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCCC
Confidence 789999988765 457899999999866543 3 34444555554 459999999999999886654444444444433
Q ss_pred ------CceEEEEeCCCCCHHHHHHHHHHHHHhccCCCCChHH
Q 002687 123 ------DETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159 (892)
Q Consensus 123 ------d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~ 159 (892)
-...+...+...+ ++.+++++.+++.++.|+..+
T Consensus 154 ~~~~~~~~l~is~k~L~~~---~~~~~~ll~eil~~~~f~d~~ 193 (248)
T PF08367_consen 154 DDDKYRPYLVISAKCLDEK---LDEAFELLSEILTETDFDDKE 193 (248)
T ss_dssp TECCCEEEEEEEEEEEGGG---HHHHHHHHHHHHHCB-TT-HH
T ss_pred CccceeEEEEEEEEeHhhh---HHHHHHHHHHHHhccCCCcHH
Confidence 1133444555444 999999999999999997765
No 35
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=48.27 E-value=45 Score=20.75 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=17.8
Q ss_pred HHHHH-HhCCCCHHHHHHHHHHHH
Q 002687 861 EISRL-QKEGPSDEDVSTILELEQ 883 (892)
Q Consensus 861 ~l~~l-~~~~is~~el~~ak~~~~ 883 (892)
.++.+ ..+-||++|+++.|..++
T Consensus 7 ~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 7 KLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHh
Confidence 34343 467899999999999876
No 36
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=33.72 E-value=44 Score=31.09 Aligned_cols=44 Identities=11% Similarity=-0.003 Sum_probs=34.3
Q ss_pred hhhcCChHHHHHHHhhhhCCCCCcEEEEEecCCccccHHHHHHh
Q 002687 685 DLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQY 728 (892)
Q Consensus 685 ~l~~l~~~~l~~~~~~~~~~~~~~~i~v~Gd~~~~~~~~~i~~~ 728 (892)
.+++.+++++++..+.....+.+..+.++|.++.+.+.++.+.-
T Consensus 105 ~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~~g 148 (169)
T PF01729_consen 105 MLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEYAKTG 148 (169)
T ss_dssp EEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHHHHTT
T ss_pred EecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHHHhcC
Confidence 46677889999888854444567999999999999999987643
No 37
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=26.40 E-value=3.6e+02 Score=27.37 Aligned_cols=82 Identities=11% Similarity=0.101 Sum_probs=56.1
Q ss_pred HHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCceEEeecCCCCceEEEEEE
Q 002687 213 DTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSY 292 (892)
Q Consensus 213 ~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 292 (892)
++++++.++ +....+++++=.- +.+.++....+.|..|+...+.. ......+++.......+.++|
T Consensus 53 q~l~~L~~k--t~~QiaVv~vpSt-~g~~IE~ya~rlfd~W~lG~k~~-----------~dGvLLlVa~~dr~~rIevGy 118 (271)
T COG1512 53 QQLADLEQK--TGAQIAVVTVPST-GGETIEQYATRLFDKWKLGDKAQ-----------DDGVLLLVAMNDRRVRIEVGY 118 (271)
T ss_pred HHHHHHHhc--cCCeEEEEEecCC-CCCCHHHHHHHHHHhcCCCcccc-----------CCCEEEEEEcCCCeEEEEEec
Confidence 456666666 6778888888888 88999999999999996433221 234556666677788899988
Q ss_pred ecCCCcCCCHHHHHHHHHH
Q 002687 293 KMPVNELKTIKDYKEMLTE 311 (892)
Q Consensus 293 ~~p~~~~~~~~~~~~~~l~ 311 (892)
-+.+. -.|..+.+++.
T Consensus 119 GLEg~---ltD~~a~~iIr 134 (271)
T COG1512 119 GLEGV---LTDAQAGRIIR 134 (271)
T ss_pred Ccccc---cChHHHHHHHH
Confidence 77543 23444444433
No 38
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=21.37 E-value=4.7e+02 Score=22.94 Aligned_cols=67 Identities=15% Similarity=0.054 Sum_probs=43.3
Q ss_pred HHHHHHHHhhhcCCeeeeeEEeeccCCCCCCCCCcceeEEEEE---EeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 002687 802 ETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINF---SCDPEISFKLVDLALDEISRLQKEGPSDEDVSTI 878 (892)
Q Consensus 802 ~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~---~~~p~~~~~~~~~~~~~l~~l~~~~is~~el~~a 878 (892)
-+|-|++|. +.|..|+.. +.|.|.-.- ..++.+...+.+.+...+.+++..|++.+++-..
T Consensus 52 v~raY~eLE-~eG~i~t~r---------------g~G~fV~~~~~~~~~~~~~~~~~~~l~~~I~~~~~~G~s~eei~~~ 115 (125)
T COG1725 52 VQRAYQELE-REGIVETKR---------------GKGTFVTEDAKEILDQLKRELAEEELEEFIEEAKALGLSLEEILEL 115 (125)
T ss_pred HHHHHHHHH-HCCCEEEec---------------CeeEEEcCCchhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 468889995 578888753 233332110 1223345566677777888888889999999876
Q ss_pred HHHHHH
Q 002687 879 LELEQR 884 (892)
Q Consensus 879 k~~~~~ 884 (892)
...+..
T Consensus 116 ~~~~~~ 121 (125)
T COG1725 116 LKEIYE 121 (125)
T ss_pred HHHHHh
Confidence 655543
No 39
>PF12108 SF3a60_bindingd: Splicing factor SF3a60 binding domain; InterPro: IPR021966 This domain is found in eukaryotes. This domain is about 30 amino acids in length. This domain has a single completely conserved residue Y that may be functionally important. SF3a60 makes up the SF3a complex with SF3a66 and SF3a120. This domain is the binding site of SF3a60 for SF3a120. The SF3a complex is part of the spliceosome, a protein complex involved in splicing mRNA after transcription. ; PDB: 2DT7_A.
Probab=20.98 E-value=74 Score=19.36 Aligned_cols=11 Identities=9% Similarity=0.492 Sum_probs=7.5
Q ss_pred HHHHHHHHHhc
Q 002687 212 SDTVKRFYQKW 222 (892)
Q Consensus 212 ~~~l~~f~~~~ 222 (892)
+.++++||+++
T Consensus 16 lk~Ike~Hrr~ 26 (28)
T PF12108_consen 16 LKEIKEYHRRY 26 (28)
T ss_dssp HHHHHHHHHS-
T ss_pred HHHHHHHHHhC
Confidence 56778888775
No 40
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.34 E-value=4.1e+02 Score=21.46 Aligned_cols=52 Identities=13% Similarity=0.269 Sum_probs=41.0
Q ss_pred ChhhHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHH
Q 002687 615 SPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVK 668 (892)
Q Consensus 615 ~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (892)
..+.+.+++++|.+++.+... +..+.+..+..++.+.+...+|.-.+...+.
T Consensus 11 ~~e~i~q~~~lL~~Ii~DttV--PRNIRraA~~a~e~L~~e~e~p~vRaAtaIs 62 (93)
T COG1698 11 SEEKINQVMQLLDEIIQDTTV--PRNIRRAAEEAKEALNNEGESPAVRAATAIS 62 (93)
T ss_pred hHHHHHHHHHHHHHHHccccc--cHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Confidence 357789999999998887543 7788888888888888888888877776644
Done!