Query 002691
Match_columns 892
No_of_seqs 380 out of 4161
Neff 9.6
Searched_HMMs 29240
Date Tue Mar 26 17:50:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002691.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1408-1411//hhsearch_pdb/002691hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a5y_B CED-4; apoptosis; HET: 1.0 1 1 395.2 18.2 309 158-491 130-472 (549)
2 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 355.0 26.9 306 157-490 125-452 (1249)
3 1vt4_I APAF-1 related killer D 1.0 1 1 329.4 16.3 281 158-483 130-436 (1221)
4 1z6t_A APAF-1, apoptotic prote 1.0 1 1 299.8 25.4 301 157-488 125-450 (591)
5 4ecn_A Leucine-rich repeat pro 1.0 1 1 200.1 17.0 320 510-869 443-837 (876)
6 4eco_A Uncharacterized protein 1.0 1 1 197.3 14.2 323 512-867 203-595 (636)
7 3rgz_A Protein brassinosteroid 1.0 1 1 195.7 16.4 305 514-851 393-744 (768)
8 4eco_A Uncharacterized protein 1.0 1 1 189.9 16.0 306 511-851 269-603 (636)
9 2z81_A CD282 antigen, TOLL-lik 1.0 1 1 188.8 21.2 138 504-642 16-157 (549)
10 3oja_B Anopheles plasmodium-re 1.0 1 1 188.7 20.2 296 514-845 50-356 (597)
No 1
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=1.00 E-value=1 Score=395.18 Aligned_cols=309 Identities=13% Similarity=0.125 Sum_probs=252.9
Q ss_pred CCCHHHHHHHHHHHHC------CCEEEEECCCCCCHHHHHHHHHH--HCCCCCCCCCEEEEEEECCCC--CHHHHHHHHH
Q ss_conf 2026899999997512------03999990898829999999984--105899997689999947856--9999999998
Q 002691 158 VVGLQSILEQVWSCLT------AGIIGLYGMGGVGKTTLLTLLNN--KFLNRPYGFDFVIWVVVSKDL--QLEKIQETIG 227 (892)
Q Consensus 158 ~vgr~~~~~~i~~~L~------~~vi~I~G~gGiGKTtLa~~v~~--~~~~~~~~f~~~~wv~vs~~~--~~~~i~~~i~ 227 (892)
.|||+.+++++.++|. .++|+|+||||+||||||+.+|+ +. .+..+|+.++||++++.+ +...++..|+
T Consensus 130 ~~GR~~~~~~l~~~L~~~~~~~~~vv~I~G~gGvGKTtLA~~v~~~~~~-~~~~~F~~~~wv~vs~~~~~~~~~~~~~il 208 (549)
T 2a5y_B 130 CYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQ-LIGINYDSIVWLKDSGTAPKSTFDLFTDIL 208 (549)
T ss_dssp SCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSS-TBTTTBSEEEEEECCCCSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-HHHCCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 0784179999999872515789628999869999889999999984069-874669957999978987879999999999
Q ss_pred HHCCCCCC-----CCCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCC
Q ss_conf 76099987-----656879689999999983237-279997123443333332222689999982999982340100233
Q 002691 228 KKIGLFDG-----LWKNRSREEKALDIFKVLSKK-KFVLLLDDLWERVDLTKVGVPVPNSRNVASKVVFTTRLLDVCGLM 301 (892)
Q Consensus 228 ~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~k-~~LlVlDdv~~~~~~~~~~~~l~~~~~~gs~iiiTtR~~~v~~~~ 301 (892)
.+++.... .....+...+...+++.++++ |+||||||||+..++ . ++. .+||+||+|||++.++..+
T Consensus 209 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~kr~LlVLDdv~~~~~~-~----~~~--~~gs~ilvTTR~~~v~~~~ 281 (549)
T 2a5y_B 209 LMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETI-R----WAQ--ELRLRCLVTTRDVEISNAA 281 (549)
T ss_dssp HHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHH-H----HHH--HTTCEEEEEESBGGGGGGC
T ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH-C----CCC--CCCCEEEEECCCHHHHHHC
T ss_conf 99853755345555331469999999999976898489999799971441-5----432--6998899974977999970
Q ss_pred C-CCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 4-654187158996879999998818865689999589999999991996259999999880499968999999999741
Q 002691 302 E-AHKKFKVECLSDEDAWQLFREKVGEETLNYHHDIPELAQMVAKECGGLPLALITIGRAMAYKTTPEEWRYAIQVLRRA 380 (892)
Q Consensus 302 ~-~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~~~~~~~i~~~c~glPlai~~i~~~L~~~~~~~~w~~~l~~l~~~ 380 (892)
+ ....|++++|+.++||+||.+.++... ..+.+++++.+|+++|+|+||||+++|+.|+.+ . |+.. +.+...
T Consensus 282 ~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~--~~~~~~~~~~~I~~~c~GlPLAl~~~g~~l~~~-~---w~~~-~~l~~~ 354 (549)
T 2a5y_B 282 SQTCEFIEVTSLEIDECYDFLEAYGMPMP--VGEKEEDVLNKTIELSSGNPATLMMFFKSCEPK-T---FEKM-AQLNNK 354 (549)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHTSCCCC----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-S---HHHH-HHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-H---HHHH-HHHHHH
T ss_conf 88973898999898999999998744899--855689999999999599839999999984434-4---8999-875787
Q ss_pred HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH-----------HHCCCCCCCCCCHHHHHHHHHHC--CCCCCCH-HHHH
Q ss_conf 00148983011213566203788424567886-----------65079998532688899998737--9989752-7778
Q 002691 381 ASEFAGLGKEVYPLLKFSYDSLFNDTIRSCLL-----------YCSLYPEDYHISKSDLIDCWIGE--GFLDEND-RFEA 446 (892)
Q Consensus 381 ~~~~~~~~~~i~~~l~~sy~~L~~~~~k~cfl-----------~~~~fp~~~~i~~~~li~~w~~~--g~i~~~~-~~~~ 446 (892)
.+... ...+..++.+||+.||. ++|.||+ |||+||+++.|+ ++.|+|+ ||+.... ....
T Consensus 355 l~~~~--~~~i~~~l~~Sy~~L~~-~lk~~f~~Ls~~er~l~~~ls~fp~~~~i~----i~~w~a~~~G~i~~~~~~~~~ 427 (549)
T 2a5y_B 355 LESRG--LVGVECITPYSYKSLAM-ALQRCVEVLSDEDRSALAFAVVMPPGVDIP----VKLWSCVIPVDICSNEEEQLD 427 (549)
T ss_dssp HHHHC--SSTTCCCSSSSSSSHHH-HHHHHHHTSCHHHHHHTTGGGSSCTTCCEE----HHHHHHHSCC-------CCCT
T ss_pred HHCCC--HHHHHHHHHCCCCCCCH-HHHHHHHCCCHHHHHHHHHEEEECCCCEEE----EEEEEEECCCEECCCCCCCCH
T ss_conf 61364--77789897516202267-999997526522336743235608997666----533110135500267789999
Q ss_pred HHHCCHHHHHHHHHHHHCCEEE---CCCCEEEHHHHHHHHHHHHHHCC
Q ss_conf 7611605789999882011230---59916531789988999984201
Q 002691 447 QKQNQGYFTIGILVHACLLEEV---EDDKVKMHDVIRDMTLWIACEVE 491 (892)
Q Consensus 447 ~~~~~~~~~l~~L~~~sll~~~---~~~~~~mhdlv~d~~~~~~~~~~ 491 (892)
++.+. ++++|+++||++.. ...+|+|||++|++++.++.+.+
T Consensus 428 --~~~~~-~l~~L~~rsLl~~~~~~~~~~~~mHdlv~~~a~~~~~~~~ 472 (549)
T 2a5y_B 428 --DEVAD-RLKRLSKRGALLSGKRMPVLTFKIDHIIHMFLKHVVDAQT 472 (549)
T ss_dssp --HHHHH-HHHHTTTBSSCSEEECSSSCEEECCHHHHHHHHTTSCTHH
T ss_pred --HHHHH-HHHHHHHCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf --99999-9999987588367147980499967699999999988989
No 2
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=354.97 Aligned_cols=306 Identities=20% Similarity=0.236 Sum_probs=250.4
Q ss_pred CCCCHHHHHHHHHHHHC-----CCEEEEECCCCCCHHHHHHHHHHHCCCCCC-CCCEEEEEEECCCCC--HHHHHHHHHH
Q ss_conf 52026899999997512-----039999908988299999999841058999-976899999478569--9999999987
Q 002691 157 LVVGLQSILEQVWSCLT-----AGIIGLYGMGGVGKTTLLTLLNNKFLNRPY-GFDFVIWVVVSKDLQ--LEKIQETIGK 228 (892)
Q Consensus 157 ~~vgr~~~~~~i~~~L~-----~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~-~f~~~~wv~vs~~~~--~~~i~~~i~~ 228 (892)
.||||+.+++++.+.|. .++|+|+||||+||||||+++|++...... +++.++|+++++..+ ....+..++.
T Consensus 125 ~~vgR~~~~~~l~~~l~~~~~~~~~v~i~G~gG~GKTtLa~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 204 (1249)
T 3sfz_A 125 IFVTRKKLVHAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSGGVHWVSIGKQDKSGLLMKLQNLCM 204 (1249)
T ss_dssp SCCCCHHHHHHHHHHHHTTTTSCEEEEEECSTTSSHHHHHHHHTCCHHHHTTTSTTCEEEEECCSCCHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 41257999999999986135887779999189888889999986075678862788179999788572679999999999
Q ss_pred HCCCCCCC--CCCCCHHHHHHHHHHHHCCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCC-CCC
Q ss_conf 60999876--56879689999999983237--27999712344333333222268999998299998234010023-346
Q 002691 229 KIGLFDGL--WKNRSREEKALDIFKVLSKK--KFVLLLDDLWERVDLTKVGVPVPNSRNVASKVVFTTRLLDVCGL-MEA 303 (892)
Q Consensus 229 ~l~~~~~~--~~~~~~~~~~~~l~~~l~~k--~~LlVlDdv~~~~~~~~~~~~l~~~~~~gs~iiiTtR~~~v~~~-~~~ 303 (892)
.+...... ....+.+.+.+.++..+.++ |+||||||||+..+|..+ .+|++||+|||++.++.. ++.
T Consensus 205 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LlvlDd~~~~~~~~~~--------~~~~~ilvTtR~~~~~~~~~~~ 276 (1249)
T 3sfz_A 205 RLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLKAF--------DNQCQILLTTRDKSVTDSVMGP 276 (1249)
T ss_dssp HHTTTCTTCSSCCSSHHHHHHHHHHHTSSSSCSCEEEEESCCCHHHHTTT--------CSSCEEEEEESSTTTTTTCCSC
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH--------CCCCEEEEECCCHHHHHHHCCC
T ss_conf 86553033347887778999999999735678789999567997788763--------6897899992778998763488
Q ss_pred CCEEECCC-CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf 54187158-99687999999881886568999958999999999199625999999988049996899999999974100
Q 002691 304 HKKFKVEC-LSDEDAWQLFREKVGEETLNYHHDIPELAQMVAKECGGLPLALITIGRAMAYKTTPEEWRYAIQVLRRAAS 382 (892)
Q Consensus 304 ~~~~~l~~-L~~~ea~~Lf~~~a~~~~~~~~~~~~~~~~~i~~~c~glPlai~~i~~~L~~~~~~~~w~~~l~~l~~~~~ 382 (892)
...+.+.+ |+.+|+++||...++... +...+.+++|+++|+|+||||+++|++|+.+. ..|+..++.+....+
T Consensus 277 ~~~~~~~~~l~~~~a~~l~~~~~~~~~----~~~~~~~~~i~~~~~glPLal~~~~~~l~~~~--~~~~~~l~~l~~~~~ 350 (1249)
T 3sfz_A 277 KHVVPVESGLGREKGLEILSLFVNMKK----EDLPAEAHSIIKECKGSPLVVSLIGALLRDFP--NRWAYYLRQLQNKQF 350 (1249)
T ss_dssp BCCEECCSSCCHHHHHHHHHHHHTSCS----TTCCTHHHHHHHHTTTCHHHHHHHHHHHHHSS--SCHHHHHHHHHSCCC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCH----HHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHH
T ss_conf 437982588887889999998657981----34838899999984997799999999862480--579999999865044
Q ss_pred CCC-----CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH
Q ss_conf 148-----983011213566203788424567886650799985326888999987379989752777876116057899
Q 002691 383 EFA-----GLGKEVYPLLKFSYDSLFNDTIRSCLLYCSLYPEDYHISKSDLIDCWIGEGFLDENDRFEAQKQNQGYFTIG 457 (892)
Q Consensus 383 ~~~-----~~~~~i~~~l~~sy~~L~~~~~k~cfl~~~~fp~~~~i~~~~li~~w~~~g~i~~~~~~~~~~~~~~~~~l~ 457 (892)
... ...+.+..++.+||+.|++ +.|.||+|||+||+++.|+++.++.+|.++ ++.++.+++
T Consensus 351 ~~~~~~~~~~~~~~~~~l~~s~~~L~~-~~~~~~~~l~~f~~~~~i~~~~~~~~~~~~-------------~~~~~~~l~ 416 (1249)
T 3sfz_A 351 KRIRKSSSYDYEALDEAMSISVEMLRE-DIKDYYTDLSILQKDVKVPTKVLCVLWDLE-------------TEEVEDILQ 416 (1249)
T ss_dssp CCSSCTTCTTHHHHHHHHHHHHHTSCT-TTHHHHHHGGGSCTTCCEEHHHHHHHHTCC-------------HHHHHHHHH
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHHCCH-HHHHHHHHHCCCCCCCEECHHHHHHHHCCC-------------HHHHHHHHH
T ss_conf 303465564467799999989986799-999999972813799751899999885898-------------889999999
Q ss_pred HHHHHHCCEEECCC---CEEEHHHHHHHHHHHHHHC
Q ss_conf 99882011230599---1653178998899998420
Q 002691 458 ILVHACLLEEVEDD---KVKMHDVIRDMTLWIACEV 490 (892)
Q Consensus 458 ~L~~~sll~~~~~~---~~~mhdlv~d~~~~~~~~~ 490 (892)
+|+++||++..... +|+||+++|++++..+.++
T Consensus 417 ~L~~~sl~~~~~~~~~~~~~~h~l~~~~~~~~~~~~ 452 (1249)
T 3sfz_A 417 EFVNKSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQ 452 (1249)
T ss_dssp HHHHTTSCEEEESSSSEEEECCHHHHHHHHHHTGGG
T ss_pred HHHHCCCEEEECCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 997446338963798118996689999987450678
No 3
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A*
Probab=1.00 E-value=1 Score=329.39 Aligned_cols=281 Identities=16% Similarity=0.209 Sum_probs=224.6
Q ss_pred CCCHHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCE-EEEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 2026899999997512----0399999089882999999998410589999768-9999947856999999999876099
Q 002691 158 VVGLQSILEQVWSCLT----AGIIGLYGMGGVGKTTLLTLLNNKFLNRPYGFDF-VIWVVVSKDLQLEKIQETIGKKIGL 232 (892)
Q Consensus 158 ~vgr~~~~~~i~~~L~----~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~~f~~-~~wv~vs~~~~~~~i~~~i~~~l~~ 232 (892)
.|||+.+++++.++|. .++|+|+||||+||||||+.+|++. ++..+|+. ++|+++++.++...++..+++.++.
T Consensus 130 ~VGRe~eLeeL~elL~~~d~~RVV~IvGmGGIGKTTLAk~Vy~d~-rV~~~Fd~gV~WVsVs~~~d~~~IL~~Ll~lL~~ 208 (1221)
T 1vt4_I 130 NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY-KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208 (1221)
T ss_dssp CCCCHHHHHHHHHHHHHCCSSCEEEECCSTTSSHHHHHHHHHHHC-HHHHHHSSCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH-HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 789289999999997435897189997699966799999999714-9887489938999828999999999999999862
Q ss_pred CCC----CCC-----CCCHHHHHHHHHHHH---CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCC
Q ss_conf 987----656-----879689999999983---23727999712344333333222268999998299998234010023
Q 002691 233 FDG----LWK-----NRSREEKALDIFKVL---SKKKFVLLLDDLWERVDLTKVGVPVPNSRNVASKVVFTTRLLDVCGL 300 (892)
Q Consensus 233 ~~~----~~~-----~~~~~~~~~~l~~~l---~~k~~LlVlDdv~~~~~~~~~~~~l~~~~~~gs~iiiTtR~~~v~~~ 300 (892)
... ... ..+.+.....+.+.+ .++|+||||||||+...|..+ .+||+||+|||++.++..
T Consensus 209 i~~~~~~~~d~~~~ip~~leeL~e~Lr~lL~~l~~KRvLLVLDDVwd~eqLe~f--------~pGSRILVTTRd~~Va~~ 280 (1221)
T 1vt4_I 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF--------NLSCKILLTTRFKQVTDF 280 (1221)
T ss_dssp HCSSSTTTSCCCSSHHHHHHHHHHHHHHHHHHSTTSSCEEEEESCCCHHHHHHH--------HSSCCEEEECSCSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH--------CCCEEEEEECCCHHHHHH
T ss_conf 272102200134679999999999999999850478879987186818999864--------798299994437379986
Q ss_pred CCCCCEEECC------CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-CHHHHHHH
Q ss_conf 3465418715------8996879999998818865689999589999999991996259999999880499-96899999
Q 002691 301 MEAHKKFKVE------CLSDEDAWQLFREKVGEETLNYHHDIPELAQMVAKECGGLPLALITIGRAMAYKT-TPEEWRYA 373 (892)
Q Consensus 301 ~~~~~~~~l~------~L~~~ea~~Lf~~~a~~~~~~~~~~~~~~~~~i~~~c~glPlai~~i~~~L~~~~-~~~~w~~~ 373 (892)
+.....+.++ +|+.+|||+||.+..+.. ..++..++ |+|+||||+++|+.|+.+. +.+.|+..
T Consensus 281 l~g~~vy~LeL~d~dL~LS~eEA~eLF~~~~g~~-------~eeL~~eI---CgGLPLALkLaGs~Lr~k~~s~eeW~~~ 350 (1221)
T 1vt4_I 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR-------PQDLPREV---LTTNPRRLSIIAESIRDGLATWDNWKHV 350 (1221)
T ss_dssp HHHHSSCEEEECSSSSCCCHHHHHHHHHHHHCCC-------TTTHHHHH---CCCCHHHHHHHHHHHHHSCSSHHHHHHC
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC-------HHHHHHHH---HCCCHHHHHHHHHHHHCCCCCHHHHHCC
T ss_conf 6897089946865568969999999999974998-------89999999---6989999999999984889979998669
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHH-HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCH
Q ss_conf 9999741001489830112135662037884245-678866507999853268889999873799897527778761160
Q 002691 374 IQVLRRAASEFAGLGKEVYPLLKFSYDSLFNDTI-RSCLLYCSLYPEDYHISKSDLIDCWIGEGFLDENDRFEAQKQNQG 452 (892)
Q Consensus 374 l~~l~~~~~~~~~~~~~i~~~l~~sy~~L~~~~~-k~cfl~~~~fp~~~~i~~~~li~~w~~~g~i~~~~~~~~~~~~~~ 452 (892)
....+..++.+||+.||+ +. |.||++||+||+++.|+.+.++.+|+++| ++.+
T Consensus 351 -------------~~~~I~aaLelSYd~Lp~-eelK~cFL~LAIFPed~~I~~elLa~LW~aeG------------eedA 404 (1221)
T 1vt4_I 351 -------------NCDKLTTIIESSLNVLEP-AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI------------KSDV 404 (1221)
T ss_dssp -------------SCHHHHHHHHHHHHHSCT-THHHHHHHHTTSSCTTSCEEHHHHHHHHCSSC------------SHHH
T ss_pred -------------CHHHHHHHHHHHHHHCCH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC------------HHHH
T ss_conf -------------861899999999984889-99999999971779999877999998766778------------8999
Q ss_pred HHHHHHHHHHHCCEEE-CCCCEEEHHHHHHHH
Q ss_conf 5789999882011230-599165317899889
Q 002691 453 YFTIGILVHACLLEEV-EDDKVKMHDVIRDMT 483 (892)
Q Consensus 453 ~~~l~~L~~~sll~~~-~~~~~~mhdlv~d~~ 483 (892)
..++++|+++||++.. ....|+|||++++++
T Consensus 405 e~~L~eLvdRSLLq~d~~~~rYrMHDLllELr 436 (1221)
T 1vt4_I 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436 (1221)
T ss_dssp HHHHHHHHTSSSSSBCSSSSEEBCCCHHHHHH
T ss_pred HHHHHHHHHHCCEEEECCCCEEEEHHHHHHHH
T ss_conf 99999999619889868999898609999985
No 4
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=1.00 E-value=1 Score=299.84 Aligned_cols=301 Identities=21% Similarity=0.281 Sum_probs=234.0
Q ss_pred CCCCHHHHHHHHHHHHC-----CCEEEEECCCCCCHHHHHHHHHHHCCCC-CCCC-CEEEEEEECCCCCHHHHHHH---H
Q ss_conf 52026899999997512-----0399999089882999999998410589-9997-68999994785699999999---9
Q 002691 157 LVVGLQSILEQVWSCLT-----AGIIGLYGMGGVGKTTLLTLLNNKFLNR-PYGF-DFVIWVVVSKDLQLEKIQET---I 226 (892)
Q Consensus 157 ~~vgr~~~~~~i~~~L~-----~~vi~I~G~gGiGKTtLa~~v~~~~~~~-~~~f-~~~~wv~vs~~~~~~~i~~~---i 226 (892)
.||||+.+++++.+++. .++|+|+||||+||||||+.++++. .. ..+| +.++|++++.. +...+... +
T Consensus 125 ~~vGR~~~l~~L~~~L~~~~~~~~~v~I~G~~GiGKTtLa~~~~~~~-~~~~~~f~~~v~wv~~~~~-~~~~~~~~l~~l 202 (591)
T 1z6t_A 125 VFVTRKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDH-SLLEGCFPGGVHWVSVGKQ-DKSGLLMKLQNL 202 (591)
T ss_dssp SCCCCHHHHHHHHHHHTTSTTSCEEEEEECCTTSSHHHHHHHHHCCH-HHHHHHCTTCEEEEEEESC-CHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCH-HHHHHHCCCCEEEEECCCC-CHHHHHHHHHHH
T ss_conf 14052999999999986036888469997699898899999998355-6888528996599977877-668899999999
Q ss_pred HHHCCCCC--CCCCCCCHHHHHHHHHHHHCC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCC
Q ss_conf 87609998--765687968999999998323--72799971234433333322226899999829999823401002334
Q 002691 227 GKKIGLFD--GLWKNRSREEKALDIFKVLSK--KKFVLLLDDLWERVDLTKVGVPVPNSRNVASKVVFTTRLLDVCGLME 302 (892)
Q Consensus 227 ~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~--k~~LlVlDdv~~~~~~~~~~~~l~~~~~~gs~iiiTtR~~~v~~~~~ 302 (892)
+..++... ......+.+.....+...+.+ +++||||||+|+...+..+ ..|++||+|||+..++..+.
T Consensus 203 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LLVLDdv~~~~~l~~l--------~~~~~ilvTsR~~~~~~~~~ 274 (591)
T 1z6t_A 203 CTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKAF--------DSQCQILLTTRDKSVTDSVM 274 (591)
T ss_dssp HHHHCSSCCSCSSCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECCHHHHHTT--------CSSCEEEEEESCGGGGTTCC
T ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH--------CCCCEEEEECCCCHHHHHCC
T ss_conf 9985035565567998899999999999706799869998589987999876--------37986999898817777348
Q ss_pred CCCEEEC---CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 6541871---5899687999999881886568999958999999999199625999999988049996899999999974
Q 002691 303 AHKKFKV---ECLSDEDAWQLFREKVGEETLNYHHDIPELAQMVAKECGGLPLALITIGRAMAYKTTPEEWRYAIQVLRR 379 (892)
Q Consensus 303 ~~~~~~l---~~L~~~ea~~Lf~~~a~~~~~~~~~~~~~~~~~i~~~c~glPlai~~i~~~L~~~~~~~~w~~~l~~l~~ 379 (892)
...+++ .+|+.+|+++||...++... ....+.+.+|+++|+|+|+||..+|+.++.+ ...|...++.+..
T Consensus 275 -~~~~~v~~l~~L~~~ea~~L~~~~~~~~~----~~~~~~~~~i~~~~~G~PLal~~~a~~l~~~--~~~w~~~l~~l~~ 347 (591)
T 1z6t_A 275 -GPKYVVPVESSLGKEKGLEILSLFVNMKK----ADLPEQAHSIIKECKGSPLVVSLIGALLRDF--PNRWEYYLKQLQN 347 (591)
T ss_dssp -SCEEEEECCSSCCHHHHHHHHHHHHTSCG----GGSCTHHHHHHHHHTTCHHHHHHHHHHHHHS--TTCHHHHHHHHHS
T ss_pred -CCCEEEECCCCCCHHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC--CHHHHHHHHHHHH
T ss_conf -98268615889998999999998718983----1045999999999589837999999998448--4359999999988
Q ss_pred HHCCC-----CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
Q ss_conf 10014-----8983011213566203788424567886650799985326888999987379989752777876116057
Q 002691 380 AASEF-----AGLGKEVYPLLKFSYDSLFNDTIRSCLLYCSLYPEDYHISKSDLIDCWIGEGFLDENDRFEAQKQNQGYF 454 (892)
Q Consensus 380 ~~~~~-----~~~~~~i~~~l~~sy~~L~~~~~k~cfl~~~~fp~~~~i~~~~li~~w~~~g~i~~~~~~~~~~~~~~~~ 454 (892)
..... ......+..++..||+.||+ +.|.||+++|+||+++.|+.+.+...|.++ .+.+..
T Consensus 348 ~~~~~~~~~~~~~~~~l~~~l~~s~~~L~~-~~~~~l~~la~f~~~~~i~~~~l~~l~~~~-------------~~~~~~ 413 (591)
T 1z6t_A 348 KQFKRIRKSSSYDYEALDEAMSISVEMLRE-DIKDYYTDLSILQKDVKVPTKVLCILWDME-------------TEEVED 413 (591)
T ss_dssp CCCCCSSCCCSSCCHHHHHHHHHHHHTSCT-TTHHHHHHGGGCCTTCCEEHHHHHHHHTCC-------------HHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCH-HHHHHHHHCCCCCCCCCCCHHHHHHHHCCC-------------HHHHHH
T ss_conf 689876511465437899999999986899-999999974556799850899999996658-------------899999
Q ss_pred HHHHHHHHHCCEEEC---CCCEEEHHHHHHHHHHHHH
Q ss_conf 899998820112305---9916531789988999984
Q 002691 455 TIGILVHACLLEEVE---DDKVKMHDVIRDMTLWIAC 488 (892)
Q Consensus 455 ~l~~L~~~sll~~~~---~~~~~mhdlv~d~~~~~~~ 488 (892)
++++|+++||++... ...|+||+++++++.....
T Consensus 414 ~l~~L~~~~Ll~~~~~~~~~~~~~H~lv~~~~~~~~~ 450 (591)
T 1z6t_A 414 ILQEFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKNC 450 (591)
T ss_dssp HHHHHHHTTSSEEEEETTEEEEECCHHHHHHHHHHTG
T ss_pred HHHHHHHCCCEEEECCCCCCEEEECHHHHHHHHHHHH
T ss_conf 9999985958688548985679976899999986535
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=1.00 E-value=1 Score=200.06 Aligned_cols=320 Identities=12% Similarity=0.133 Sum_probs=201.3
Q ss_pred CCCCCCCEEEEECCCCCCCC------------------CCCCCC--CCCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEE
Q ss_conf 66675110899814544332------------------233267--8876427993078653336033317998759983
Q 002691 510 TISGWVKIRRLSLMENHIED------------------LSNIYP--RCPHLVTLFLNNNKLEVISSRFFHYMPSLKVLKL 569 (892)
Q Consensus 510 ~~~~~~~l~~L~l~~~~~~~------------------l~~~~~--~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L 569 (892)
.+..+++++.|++++|.+.. +|..+. .+++|+.|.+++|.+....+..+.++++|++|++
T Consensus 443 ~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~L 522 (876)
T 4ecn_A 443 AIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNI 522 (876)
T ss_dssp GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEEC
T ss_pred HHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEEC
T ss_conf 87569998789796886788746532233222222445874440255999778987189887527387737999899989
Q ss_pred CCCC-CCC--CCHHHCCCC-------CCCEEECCCCCCCCCCH--HHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCE
Q ss_conf 3765-654--671001867-------68788634887642241--11137878888437876765446344318976647
Q 002691 570 SHIQ-LTE--LPSRISKLV-------SLQHLDLSHTRIKELPG--ELEILVNLKCLNLNHTMYLSVIPRQLISKFSMLHV 637 (892)
Q Consensus 570 ~~~~-l~~--lp~~i~~L~-------~L~~L~l~~~~i~~lp~--~i~~L~~L~~L~l~~~~~~~~ip~~~i~~L~~L~~ 637 (892)
++|. ++. +|..++++. +|++|++++|.+..+|. .+..+++|+.|++++|.. ..+| . ++.+++|++
T Consensus 523 s~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l-~~lp-~-~~~L~~L~~ 599 (876)
T 4ecn_A 523 ACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV-RHLE-A-FGTNVKLTD 599 (876)
T ss_dssp TTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCC-CBCC-C-CCTTSEESE
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCEEECCCCCC-CCCH-H-HCCCCCCEE
T ss_conf 689876566461778752330155688319982289477618723551589889898979982-5621-2-247985007
Q ss_pred EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC-CCEEEEEECCHHHHHHHHC------------------------
Q ss_conf 772024433678788897433112248997127999-7578999614255888650------------------------
Q 002691 638 LRMFSSLYFKNSEVSGDGVLFARDELLVEELLGLKN-LEVLEFTLTSSHVLQMFLT------------------------ 692 (892)
Q Consensus 638 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-L~~L~i~~~~~~~~~~~~~------------------------ 692 (892)
|++..+. +.. .+..+..+++ |+.|.++.+....++....
T Consensus 600 L~Ls~N~------l~~----------lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 600 LKLDYNQ------IEE----------IPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp EECCSSC------CSC----------CCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSC
T ss_pred EECCCCC------CCC----------CHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 9871871------250----------358775251149899984997874764452255677788977088478864320
Q ss_pred --CCH--HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCC-----CCCCCCCEEEEECCCCC
Q ss_conf --400--001440567358788851044321115887779671488856125354455-----57898577987448888
Q 002691 693 --SNE--LRRCSQALFLDGLKNSKWIDASQLAELKHLNRLRIRDCEELEELKVDLRQS-----CVFNSLQKVQISLCSKL 763 (892)
Q Consensus 693 --~~~--~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~-----~~l~~L~~L~L~~c~~l 763 (892)
... ...+|+.|.+.++.- ..++...+..+++|+.|.++++ .+..++...... ..+++|+.|++++| .+
T Consensus 664 ~~~l~~~~~~~L~~L~Ls~N~L-~~lp~~~~~~l~~L~~L~Ls~N-~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N-~L 740 (876)
T 4ecn_A 664 SCSMDDYKGINASTVTLSYNEI-QKFPTELFATGSPISTIILSNN-LMTSIPENSLKPKDGNYKNTYLLTTIDLRFN-KL 740 (876)
T ss_dssp SSCTTTCCCCCEEEEECCSSCC-CSCCHHHHHTTCCCSEEECCSC-CCSCCCTTSSSCTTSCCTTGGGCCEEECCSS-CC
T ss_pred HHHHCCCCCCCCCEEECCCCCC-CCCCHHHHCCCCCCCEEECCCC-CCCCCCHHHHCCCCCCCCCCCCCCEEECCCC-CC
T ss_conf 0000013579768898319968-8659788713898899989899-6885496784555334321487158988899-78
Q ss_pred CCCC-CCC--CCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC------CCCCCCCCCCCCC
Q ss_conf 8882-101--689855798813720035410375567752225788866752475237665------3442358988899
Q 002691 764 KDLT-FLV--FAPNVKSIEIRSCLAMEEIISVQKFADFPETVRNNLNPFAKLQHLELVCLR------NLNSIYWKPLPFS 834 (892)
Q Consensus 764 ~~l~-~l~--~l~~L~~L~L~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~------~L~~i~~~~~~~p 834 (892)
+.+| .+. .+++|+.|+|++|.. ..++ ..+..+++|+.|++++++ -...++.....++
T Consensus 741 ~~lp~~l~~~~l~~L~~L~Ls~N~L-~~lp-------------~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~ 806 (876)
T 4ecn_A 741 TSLSDDFRATTLPYLSNMDVSYNCF-SSFP-------------TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCP 806 (876)
T ss_dssp CCCCGGGSTTTCTTCCEEECCSSCC-SSCC-------------CGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCCHHHHHHCCCCCCCEEEECCCCC-CCCC-------------HHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 6652776244279869899089978-7610-------------5661599988998879977665632444868883699
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCEEEECHHH
Q ss_conf 82289643565667788999756785259964375
Q 002691 835 QLKEMLVDDCYFLKKLPLDFNSAKERKIVIRGEEY 869 (892)
Q Consensus 835 ~L~~L~i~~C~~L~~lp~~~~~~~~~l~~~~~~~~ 869 (892)
+|+.|++.+| ++..+|..+.+ .|..+....+
T Consensus 807 ~L~~L~Ls~N-~L~~Ip~~l~~---~L~~LdLs~N 837 (876)
T 4ecn_A 807 SLIQLQIGSN-DIRKVDEKLTP---QLYILDIADN 837 (876)
T ss_dssp SCCEEECCSS-CCCBCCSCCCS---SSCEEECCSC
T ss_pred CCCEEECCCC-CCCCCCHHHCC---CCCEEECCCC
T ss_conf 8788988799-78740876628---7788999799
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00 E-value=1 Score=197.31 Aligned_cols=323 Identities=11% Similarity=0.075 Sum_probs=140.0
Q ss_pred CCCCCEEEEECCCCCCCC------------------CCCCCC--CCCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEECC
Q ss_conf 675110899814544332------------------233267--887642799307865333603331799875998337
Q 002691 512 SGWVKIRRLSLMENHIED------------------LSNIYP--RCPHLVTLFLNNNKLEVISSRFFHYMPSLKVLKLSH 571 (892)
Q Consensus 512 ~~~~~l~~L~l~~~~~~~------------------l~~~~~--~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~ 571 (892)
..+++++.|+++++.+.. +|..+. .+++|++|.+++|.+....+..+.++++|++|++++
T Consensus 203 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 282 (636)
T 4eco_A 203 MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVAC 282 (636)
T ss_dssp GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTT
T ss_pred HCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCEEECCC
T ss_conf 25647878988688236642322122222100102486322004468788898048857762838883499978897847
Q ss_pred CC-CCC--CCHHHCCC------CCCCEEECCCCCCCCCCH--HHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEE
Q ss_conf 65-654--67100186------768788634887642241--11137878888437876765446344318976647772
Q 002691 572 IQ-LTE--LPSRISKL------VSLQHLDLSHTRIKELPG--ELEILVNLKCLNLNHTMYLSVIPRQLISKFSMLHVLRM 640 (892)
Q Consensus 572 ~~-l~~--lp~~i~~L------~~L~~L~l~~~~i~~lp~--~i~~L~~L~~L~l~~~~~~~~ip~~~i~~L~~L~~L~~ 640 (892)
|. ++. +|..++.+ ++|++|++++|.++.+|. .++.+++|+.|++++|...+.+| . ++.+++|++|++
T Consensus 283 n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~-~~~l~~L~~L~L 360 (636)
T 4eco_A 283 NRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-A-FGSEIKLASLNL 360 (636)
T ss_dssp CTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-C-CEEEEEESEEEC
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCHH-H-HCCCCCCCEEEC
T ss_conf 98876653357887543046578888898979937766765554257888989690880705166-6-478898898989
Q ss_pred ECCCCC-C-----------------CCCCCCCCCCCCHHHHHHHHHCCC--CCCCEEEEEECCHHHH-HHHHC----CCH
Q ss_conf 024433-6-----------------787888974331122489971279--9975789996142558-88650----400
Q 002691 641 FSSLYF-K-----------------NSEVSGDGVLFARDELLVEELLGL--KNLEVLEFTLTSSHVL-QMFLT----SNE 695 (892)
Q Consensus 641 ~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~l~~l--~~L~~L~i~~~~~~~~-~~~~~----~~~ 695 (892)
..+... . .+.+.. .+..+..+ ++|+.|.++.+..... +..+. ...
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~----------lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~ 430 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLKY----------IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCSS----------CCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCC
T ss_pred CCCCCCCCCHHHHHHCCCCCEEECCCCCCCC----------CCHHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf 8994030337565102368689852982754----------466553334576688977488578865244200220112
Q ss_pred HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCC-----CCCCCCCEEEEECCCCCCCCC-CC
Q ss_conf 001440567358788851044321115887779671488856125354455-----578985779874488888882-10
Q 002691 696 LRRCSQALFLDGLKNSKWIDASQLAELKHLNRLRIRDCEELEELKVDLRQS-----CVFNSLQKVQISLCSKLKDLT-FL 769 (892)
Q Consensus 696 ~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~-----~~l~~L~~L~L~~c~~l~~l~-~l 769 (892)
...+|+.|.+.++.- ..++...+..+++|+.|.++++. +..++...... ..+++|+.|++++| .++.+| .+
T Consensus 431 ~~~~L~~L~Ls~N~l-~~lp~~~~~~l~~L~~L~Ls~N~-l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N-~l~~lp~~~ 507 (636)
T 4eco_A 431 KGINVSSINLSNNQI-SKFPKELFSTGSPLSSINLMGNM-LTEIPKNSLKDENENFKNTYLLTSIDLRFN-KLTKLSDDF 507 (636)
T ss_dssp CCCCEEEEECCSSCC-CSCCTHHHHTTCCCSEEECCSSC-CSBCCSSSSEETTEECTTGGGCCEEECCSS-CCCBCCGGG
T ss_pred CCCCCCEEECCCCCC-CCCCHHHHCCCCCCCEEECCCCC-CCCCCHHHHCCCCCCCCCCCCCCEEECCCC-CCCCCCHHH
T ss_conf 589888897727966-86787887158988989897997-887397884044001221477338989699-388168545
Q ss_pred C--CCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC------CCCCCCCCCCCCCCCCEEEE
Q ss_conf 1--689855798813720035410375567752225788866752475237665------34423589888998228964
Q 002691 770 V--FAPNVKSIEIRSCLAMEEIISVQKFADFPETVRNNLNPFAKLQHLELVCLR------NLNSIYWKPLPFSQLKEMLV 841 (892)
Q Consensus 770 ~--~l~~L~~L~L~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~------~L~~i~~~~~~~p~L~~L~i 841 (892)
. .+++|+.|+|++|.. ..++ ..+..+++|+.|+++++. -...++.....+++|+.|++
T Consensus 508 ~~~~l~~L~~L~Ls~N~l-~~ip-------------~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~L 573 (636)
T 4eco_A 508 RATTLPYLVGIDLSYNSF-SKFP-------------TQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQI 573 (636)
T ss_dssp STTTCTTCCEEECCSSCC-SSCC-------------CGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEEC
T ss_pred HHCCCCCCCEEECCCCCC-CCCC-------------HHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEC
T ss_conf 344588769898989988-7768-------------23530888787889888665667312127377856998788989
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECH
Q ss_conf 35656677889997567852599643
Q 002691 842 DDCYFLKKLPLDFNSAKERKIVIRGE 867 (892)
Q Consensus 842 ~~C~~L~~lp~~~~~~~~~l~~~~~~ 867 (892)
.+| +++.+|..+. +.+..+...
T Consensus 574 s~N-~l~~ip~~~~---~~L~~L~Ls 595 (636)
T 4eco_A 574 GSN-DIRKVNEKIT---PNISVLDIK 595 (636)
T ss_dssp CSS-CCCBCCSCCC---TTCCEEECC
T ss_pred CCC-CCCCCCHHHH---CCCCEEECC
T ss_conf 899-4770597683---867899876
No 7
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=195.65 Aligned_cols=305 Identities=15% Similarity=0.134 Sum_probs=139.7
Q ss_pred CCCEEEEECCCCCCC-CCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCC-CCCHHHCCCCCCCEEE
Q ss_conf 511089981454433-22332678876427993078653336033317998759983376565-4671001867687886
Q 002691 514 WVKIRRLSLMENHIE-DLSNIYPRCPHLVTLFLNNNKLEVISSRFFHYMPSLKVLKLSHIQLT-ELPSRISKLVSLQHLD 591 (892)
Q Consensus 514 ~~~l~~L~l~~~~~~-~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~~~l~-~lp~~i~~L~~L~~L~ 591 (892)
++.++.|++.+|.+. .+|..+..+++|+.|++++|.+....+..+..+++|++|++++|.+. .+|..++.+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCEEEE
T ss_conf 47761898977846542487775689879898958846685467774499889898978815471897882877732999
Q ss_pred CCCCCCC-CCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 3488764-224111137878888437876765446344318976647772024433678788897433112248997127
Q 002691 592 LSHTRIK-ELPGELEILVNLKCLNLNHTMYLSVIPRQLISKFSMLHVLRMFSSLYFKNSEVSGDGVLFARDELLVEELLG 670 (892)
Q Consensus 592 l~~~~i~-~lp~~i~~L~~L~~L~l~~~~~~~~ip~~~i~~L~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 670 (892)
+++|.+. .+|..+..+++|+.|++++|.....+|.. ++.+++|+.|++..+ .+.+ ..+..++.
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N------~l~~---------~~p~~l~~ 536 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW-IGRLENLAILKLSNN------SFSG---------NIPAELGD 536 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGG-GGGCTTCCEEECCSS------CCEE---------ECCGGGGG
T ss_pred ECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHH-HHCCCCCCEEECCCC------CCCC---------CCCHHHCC
T ss_conf 0199513758878816998998975399518968768-856899998989789------4337---------48877708
Q ss_pred CCCCCEEEEEECCHH-HHHHHHCCCH------HHCCCEEEEECCCC----------------------------------
Q ss_conf 999757899961425-5888650400------00144056735878----------------------------------
Q 002691 671 LKNLEVLEFTLTSSH-VLQMFLTSNE------LRRCSQALFLDGLK---------------------------------- 709 (892)
Q Consensus 671 l~~L~~L~i~~~~~~-~~~~~~~~~~------~~~~L~~L~l~~~~---------------------------------- 709 (892)
+++|+.|+++.+... .++....... .....+...+....
T Consensus 537 l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 616 (768)
T 3rgz_A 537 CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNIT 616 (768)
T ss_dssp CTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTT
T ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
T ss_conf 89899898988846882795786042122320134542111134443222233222100135563232002321100113
Q ss_pred --CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCEEEEECCCCH
Q ss_conf --8851044321115887779671488856125354455578985779874488888882-1016898557988137200
Q 002691 710 --NSKWIDASQLAELKHLNRLRIRDCEELEELKVDLRQSCVFNSLQKVQISLCSKLKDLT-FLVFAPNVKSIEIRSCLAM 786 (892)
Q Consensus 710 --~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~l~~L~~L~L~~c~~l~~l~-~l~~l~~L~~L~L~~c~~l 786 (892)
.........+..+++|+.|+++++.....+| .... .+++|+.|+++++.....+| .++.+++|+.|+|+++...
T Consensus 617 ~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip-~~l~--~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~ 693 (768)
T 3rgz_A 617 SRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP-KEIG--SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693 (768)
T ss_dssp SCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC-GGGG--GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred CCEECCCCCHHHHCCCCCCEEECCCCCCCCCCC-HHHH--CCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCC
T ss_conf 310046274334033566579785880155587-7884--1415787848688038878967847778998989788023
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 35410375567752225788866752475237665344235898889982289643565667788
Q 002691 787 EEIISVQKFADFPETVRNNLNPFAKLQHLELVCLRNLNSIYWKPLPFSQLKEMLVDDCYFLKKLP 851 (892)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~i~~~~~~~p~L~~L~i~~C~~L~~lp 851 (892)
..++ ..+..+++|++|++++++--..+|.. ..+..+....+.++|.|-..|
T Consensus 694 g~ip-------------~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 694 GRIP-------------QAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp ECCC-------------GGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEESTT
T ss_pred CCCC-------------HHHHCCCCCCEEECCCCCCCCCCCCC-HHHCCCCHHHHCCCCHHCCCC
T ss_conf 8688-------------67757887897879688155608996-010248977756983210887
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00 E-value=1 Score=189.91 Aligned_cols=306 Identities=15% Similarity=0.183 Sum_probs=177.0
Q ss_pred CCCCCCEEEEECCCCC-CCC--CCCCCCCC------CCCCEEEECCCCCCCCCC-HHHCCCCCCCEEEECCCCCC-CCCH
Q ss_conf 6675110899814544-332--23326788------764279930786533360-33317998759983376565-4671
Q 002691 511 ISGWVKIRRLSLMENH-IED--LSNIYPRC------PHLVTLFLNNNKLEVISS-RFFHYMPSLKVLKLSHIQLT-ELPS 579 (892)
Q Consensus 511 ~~~~~~l~~L~l~~~~-~~~--l~~~~~~~------~~L~~L~l~~~~l~~~~~-~~~~~l~~L~~L~L~~~~l~-~lp~ 579 (892)
...+++++.|++++|. +.. +|..+..+ ++|+.|++++|.+..+|. ..+..+++|++|++++|.+. .+|
T Consensus 269 l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 269 LKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP- 347 (636)
T ss_dssp TTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-
T ss_pred HHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCHH-
T ss_conf 8349997889784798876653357887543046578888898979937766765554257888989690880705166-
Q ss_pred HHCCCCCCCEEECCCCCCCCCCHHHHCCCC-CCEEECCCCCCCCCCCHHHHCCCC--CCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 001867687886348876422411113787-888843787676544634431897--66477720244336787888974
Q 002691 580 RISKLVSLQHLDLSHTRIKELPGELEILVN-LKCLNLNHTMYLSVIPRQLISKFS--MLHVLRMFSSLYFKNSEVSGDGV 656 (892)
Q Consensus 580 ~i~~L~~L~~L~l~~~~i~~lp~~i~~L~~-L~~L~l~~~~~~~~ip~~~i~~L~--~L~~L~~~~~~~~~~~~~~~~~~ 656 (892)
.++.+++|++|++++|.+..+|..+..+++ |+.|++++|. +..+|.. +..+. +|+.|++.. +.+.+
T Consensus 348 ~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~-l~~lp~~-~~~~~l~~L~~L~Ls~------N~l~~--- 416 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNK-LKYIPNI-FDAKSVSVMSAIDFSY------NEIGS--- 416 (636)
T ss_dssp CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSC-CSSCCSC-CCTTCSSCEEEEECCS------SCTTT---
T ss_pred HHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCEEECCCCC-CCCCCHH-HHHCCCCCCCEEECCC------CCCCC---
T ss_conf 64788988989898994030337565102368689852982-7544665-5333457668897748------85788---
Q ss_pred CCCHHHHHHHHHC-------CCCCCCEEEEEECCHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCC-------C
Q ss_conf 3311224899712-------7999757899961425588865040000144056735878885104432111-------5
Q 002691 657 LFARDELLVEELL-------GLKNLEVLEFTLTSSHVLQMFLTSNELRRCSQALFLDGLKNSKWIDASQLAE-------L 722 (892)
Q Consensus 657 ~~~~~~~~~~~l~-------~l~~L~~L~i~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~-------l 722 (892)
..+..+. .+.+|+.|.++.+....++... ...++.|+.|.+.++.-. .++...+.. +
T Consensus 417 ------~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~--~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l 487 (636)
T 4eco_A 417 ------VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKEL--FSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNT 487 (636)
T ss_dssp ------TTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHH--HHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTG
T ss_pred ------CCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHH--HCCCCCCCEEECCCCCCC-CCCHHHHCCCCCCCCCC
T ss_conf ------652442002201125898888977279668678788--715898898989799788-73978840440012214
Q ss_pred CCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCC
Q ss_conf 887779671488856125354455578985779874488888882-1016898557988137200354103755677522
Q 002691 723 KHLNRLRIRDCEELEELKVDLRQSCVFNSLQKVQISLCSKLKDLT-FLVFAPNVKSIEIRSCLAMEEIISVQKFADFPET 801 (892)
Q Consensus 723 ~~L~~L~l~~~~~l~~l~~~~~~~~~l~~L~~L~L~~c~~l~~l~-~l~~l~~L~~L~L~~c~~l~~~~~~~~~~~~~~~ 801 (892)
++|+.|+++++. +..++..+.. ..+++|+.|++++| .++.+| .+..+++|+.|+++++..+..-. ..+ .
T Consensus 488 ~~L~~L~Ls~N~-l~~lp~~~~~-~~l~~L~~L~Ls~N-~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~---l~~----~ 557 (636)
T 4eco_A 488 YLLTSIDLRFNK-LTKLSDDFRA-TTLPYLVGIDLSYN-SFSKFPTQPLNSSTLKGFGIRNQRDAQGNR---TLR----E 557 (636)
T ss_dssp GGCCEEECCSSC-CCBCCGGGST-TTCTTCCEEECCSS-CCSSCCCGGGGCSSCCEEECCSCBCTTCCB---CCC----C
T ss_pred CCCCEEECCCCC-CCCCCHHHHH-CCCCCCCEEECCCC-CCCCCCHHHHCCCCCCEEECCCCCCCCCCC---CCC----C
T ss_conf 773389896993-8816854534-45887698989899-887768235308887878898886656673---121----2
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 25788866752475237665344235898889982289643565667788
Q 002691 802 VRNNLNPFAKLQHLELVCLRNLNSIYWKPLPFSQLKEMLVDDCYFLKKLP 851 (892)
Q Consensus 802 ~~~~~~~~~~L~~L~l~~c~~L~~i~~~~~~~p~L~~L~i~~C~~L~~lp 851 (892)
++..+..+++|++|++.++. +..++... +++|+.|++.+|+ +.+++
T Consensus 558 ~p~~l~~l~~L~~L~Ls~N~-l~~ip~~~--~~~L~~L~Ls~N~-l~~~~ 603 (636)
T 4eco_A 558 WPEGITLCPSLTQLQIGSND-IRKVNEKI--TPNISVLDIKDNP-NISID 603 (636)
T ss_dssp CCTTGGGCSSCCEEECCSSC-CCBCCSCC--CTTCCEEECCSCT-TCEEE
T ss_pred CHHHHHCCCCCCEEECCCCC-CCCCCHHH--HCCCCEEECCCCC-CCCCC
T ss_conf 73778569987889898994-77059768--3867899876998-76336
No 9
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=1.00 E-value=1 Score=188.79 Aligned_cols=138 Identities=23% Similarity=0.283 Sum_probs=90.7
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCHH-H
Q ss_conf 710255666751108998145443322-33267887642799307865333603331799875998337656546710-0
Q 002691 504 GLCKASTISGWVKIRRLSLMENHIEDL-SNIYPRCPHLVTLFLNNNKLEVISSRFFHYMPSLKVLKLSHIQLTELPSR-I 581 (892)
Q Consensus 504 ~~~~~~~~~~~~~l~~L~l~~~~~~~l-~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~~~l~~lp~~-i 581 (892)
.+..+|.. -.+.++.|+++++.+..+ +..+..+++|++|++++|.+..+++..|.++++|++|++++|.+..++.. +
T Consensus 16 ~l~~ip~~-~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 94 (549)
T 2z81_A 16 SFTSIPSG-LTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWF 94 (549)
T ss_dssp CCSSCCSC-CCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHH
T ss_pred CCCCCCCC-CCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCHHHH
T ss_conf 41004555-79875489785885673280456458766689897997675275452135668889898980575677773
Q ss_pred CCCCCCCEEECCCCCCCC--CCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEC
Q ss_conf 186768788634887642--2411113787888843787676544634431897664777202
Q 002691 582 SKLVSLQHLDLSHTRIKE--LPGELEILVNLKCLNLNHTMYLSVIPRQLISKFSMLHVLRMFS 642 (892)
Q Consensus 582 ~~L~~L~~L~l~~~~i~~--lp~~i~~L~~L~~L~l~~~~~~~~ip~~~i~~L~~L~~L~~~~ 642 (892)
+++++|++|++++|.++. .|..++.+++|++|++++|.....+|...+..+++|++|++..
T Consensus 95 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~ 157 (549)
T 2z81_A 95 GPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKA 157 (549)
T ss_dssp TTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred CCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCC
T ss_conf 557777488798983564024345430577658977888221103876652345568665467
No 10
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=1.00 E-value=1 Score=188.70 Aligned_cols=296 Identities=17% Similarity=0.168 Sum_probs=159.9
Q ss_pred CCCEEEEECCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCH-HHCCCCCCCEEE
Q ss_conf 51108998145443322332-6788764279930786533360333179987599833765654671-001867687886
Q 002691 514 WVKIRRLSLMENHIEDLSNI-YPRCPHLVTLFLNNNKLEVISSRFFHYMPSLKVLKLSHIQLTELPS-RISKLVSLQHLD 591 (892)
Q Consensus 514 ~~~l~~L~l~~~~~~~l~~~-~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~ 591 (892)
+..++.+++.++.+..+|.. +..+++|++|++++|.+..+++..|..+++|++|++++|.+..+|. .++++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEEEECCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEE
T ss_conf 78861898338977876989880289976898989979998957860789888898979908998978875899998897
Q ss_pred CCCCCCCCCCHHH-HCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCC-------CHHHH
Q ss_conf 3488764224111-137878888437876765446344318976647772024433678788897433-------11224
Q 002691 592 LSHTRIKELPGEL-EILVNLKCLNLNHTMYLSVIPRQLISKFSMLHVLRMFSSLYFKNSEVSGDGVLF-------ARDEL 663 (892)
Q Consensus 592 l~~~~i~~lp~~i-~~L~~L~~L~l~~~~~~~~ip~~~i~~L~~L~~L~~~~~~~~~~~~~~~~~~~~-------~~~~~ 663 (892)
+++|.++.+|..+ ..+++|++|++++|.. ..++...++.+++|++|++.++ .+....... .-...
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N------~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNL-ERIEDDTFQATTSLQNLQLSSN------RLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCC-CBCCTTTTTTCTTCCEEECTTS------CCSBCCGGGCTTCSEEECCSS
T ss_pred EECCCCCCCCHHHHCCCCCCCEEEEECCCC-CCCCHHHHHCCCCCCEEECCCC------CCCCCCHHHHHHHHHHHCCCC
T ss_conf 438999977878764698878898468968-9877555522875737889688------788768566014665420147
Q ss_pred HHHHHCCCCCCCEEEEEECCHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECC
Q ss_conf 89971279997578999614255888650400001440567358788851044321115887779671488856125354
Q 002691 664 LVEELLGLKNLEVLEFTLTSSHVLQMFLTSNELRRCSQALFLDGLKNSKWIDASQLAELKHLNRLRIRDCEELEELKVDL 743 (892)
Q Consensus 664 ~~~~l~~l~~L~~L~i~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~ 743 (892)
.+..+....+|+.|.++.+....++. .....|+.|.+.++.... . ..+..+++|+.|+++++. +..+++..
T Consensus 203 ~l~~l~~~~~L~~L~ls~n~l~~~~~-----~~~~~L~~L~L~~n~l~~-~--~~l~~l~~L~~L~Ls~N~-l~~~~~~~ 273 (597)
T 3oja_B 203 LLSTLAIPIAVEELDASHNSINVVRG-----PVNVELTILKLQHNNLTD-T--AWLLNYPGLVEVDLSYNE-LEKIMYHP 273 (597)
T ss_dssp CCSEEECCTTCSEEECCSSCCCEEEC-----SCCSCCCEEECCSSCCCC-C--GGGGGCTTCSEEECCSSC-CCEEESGG
T ss_pred CCCCCCCCCHHHEEECCCCCCCCCCC-----CCCCCCCEEECCCCCCCC-C--HHHCCCCCCCEEECCCCC-CCCCCHHH
T ss_conf 44333577304203446785565566-----557878889898999999-7--566258988887897996-58879778
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 455578985779874488888882-1016898557988137200354103755677522257888667524752376653
Q 002691 744 RQSCVFNSLQKVQISLCSKLKDLT-FLVFAPNVKSIEIRSCLAMEEIISVQKFADFPETVRNNLNPFAKLQHLELVCLRN 822 (892)
Q Consensus 744 ~~~~~l~~L~~L~L~~c~~l~~l~-~l~~l~~L~~L~L~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~ 822 (892)
.. .+++|+.|++++| .+..++ ....+|+|+.|+|++|.. ..++. .+..+++|+.|++.++.
T Consensus 274 ~~--~l~~L~~L~Ls~N-~l~~l~~~~~~l~~L~~L~Ls~N~l-~~i~~-------------~~~~l~~L~~L~L~~N~- 335 (597)
T 3oja_B 274 FV--KMQRLERLYISNN-RLVALNLYGQPIPTLKVLDLSHNHL-LHVER-------------NQPQFDRLENLYLDHNS- 335 (597)
T ss_dssp GT--TCSSCCEEECTTS-CCCEEECSSSCCTTCCEEECCSSCC-CCCGG-------------GHHHHTTCSEEECCSSC-
T ss_pred HC--CCCCCCEEECCCC-CCCCCCCCCCCCCCCCEEECCCCCC-CCCCC-------------CCCCCCCCCEEECCCCC-
T ss_conf 50--7558888899799-8887774324699883898989988-85582-------------10148988989898997-
Q ss_pred CCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 44235898889982289643565
Q 002691 823 LNSIYWKPLPFSQLKEMLVDDCY 845 (892)
Q Consensus 823 L~~i~~~~~~~p~L~~L~i~~C~ 845 (892)
+..++ ...+++|+.|++.+++
T Consensus 336 l~~~~--~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 336 IVTLK--LSTHHTLKNLTLSHND 356 (597)
T ss_dssp CCCCC--CCTTCCCSEEECCSSC
T ss_pred CCCCC--HHHCCCCCEEEEECCC
T ss_conf 89869--2013998989923989
Done!