BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002694
(892 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q51UJ9|ATG11_MAGO7 Autophagy-related protein 11 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ATG11 PE=3 SV=3
Length = 1395
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 109/531 (20%), Positives = 211/531 (39%), Gaps = 84/531 (15%)
Query: 17 VHISENGHSFELDCNENSPVEAVMRFIESAAGINFNDQLVLCLDMKLEPQKLLSAYRLPS 76
V I+ +G ++D + + ++ + + I N C+ + P K L +
Sbjct: 5 VLIAHSGQRLQIDTSRLTTLDEFRSAVSRSTSIPQN-----CIIALVPPGKALRPQAIQM 59
Query: 77 DDKEVFIFNKLRLQSNSPPPSPEQVDVLEVADPPPPALSQDPHPLDDAPDPALKALPSYE 136
+ KE+F+++ R+ P SP V LE+ P P A++ P+ + D ++L S++
Sbjct: 60 E-KEIFVYDS-RMTQTGAPGSPFPVK-LEIDLPKPYAITNPPNDIIDT-----RSLESWQ 111
Query: 137 RQFRYHYHRGHAIYIRTQAKIEMCERLLREQKVQERA-------VEVGRGNLEQYYRVIN 189
FR H + E CE + +E Q A ++ NLE R
Sbjct: 112 DLFRERRVWAHRLS-------EDCEGMEKEAHDQYEAMDNMLSCLDAAVANLESVVRATE 164
Query: 190 QNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKLHPSL-QTATCK------------- 235
Y D K + +Q ++DL+ + +++ RS+ + ++ + T K
Sbjct: 165 NKYEDLKKWAATEQTGYNDLVTRWEQNLGLARSIPISAAMVRLMTGKDVTGAKGRPSKQA 224
Query: 236 CLLDFVKEEHLRKSAETCSSSHRQFENKVSQFKQIFDDVKRRVEELLNTRASLPIKNLEM 295
L D V + RK + R+F +++ + + E L ++N E
Sbjct: 225 TLEDLVDLDCARKEGRRAPTVLRKFNARIADLE--------KAEGRL-------MQNFEE 269
Query: 296 MIKEHQRFINEQKSIM------QSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSALGPM 349
+ E +R I+ +S+M L +D+ + V++ + S D + A +
Sbjct: 270 LEAEFRRVIS--RSVMGHSQDATQLLQDIQALAGKVENDYRTTMDYSTSTRDLLQA-SKI 326
Query: 350 YDVHDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKLQFPV 409
H + HLP + + +L + +N + + +M+ I VS + +Q
Sbjct: 327 AQTHTEKHLPSLHKRALEMDGMLRYAIKARNALALEQAEFMRSIADVSKL----DMQVKS 382
Query: 410 FREAMVRQDDI--FADLKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATKRE 467
A+ +++ F L+L+ + Y A AE +RRK + LA +A ++
Sbjct: 383 LINAIAEDEELATFDYLRLIHQVPYMYAAFTAEAIRRKEWFDKVKTDSTTLANEMALFQD 442
Query: 468 VEVRRREEFLK--ANSVYIPRDILGSMGLYDTPNQCDVNIAPSDTNLLDID 516
E +RR ++ K ++ Y P + D N+ + NLL D
Sbjct: 443 EEAKRRRKWYKTIGDTSYGPESL-----------STDNNVPGLEVNLLGED 482
>sp|Q7S055|ATG11_NEUCR Autophagy-related protein 11 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=atg-11 PE=3 SV=1
Length = 1300
Score = 40.8 bits (94), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 134/344 (38%), Gaps = 46/344 (13%)
Query: 166 EQKVQERAVEVGRGNLEQYYRVINQNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKL 225
E V R ++ NLE + + Y + + + Q +S L F R + R + +
Sbjct: 11 EMDVMLRCLDAAVANLENAVKGLENKYVELKEWSTSAQAEYSALATGFDRYLSLARGIAI 70
Query: 226 HPSLQTATCK--------------CLLDFVKEEHLRKSAETCSSSHRQFENKVSQFKQ-- 269
S+ L D V E R++ + S+ R+F+++++ +
Sbjct: 71 SSSMARFMTSRDDGGWKGRPQRQSTLEDLVDLELARQAGKLAPSALRKFKDRITNLDKAA 130
Query: 270 --IFDDVKRRVEELLNT--RASLPIKNLEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLV 325
+F D + + T R++L ++ +S+ L KD+ + +
Sbjct: 131 THLFQDADTLMHKFETTMSRSALS---------------HDGESL--HLLKDIEALANKI 173
Query: 326 DDCLSCQLSSSLRPHDAVSALGPMYDVHDKSHLPRMQACDRSISKLLDFCQDKKNEMNVF 385
D+ + L + D + + H + LP +Q + +L + +N +
Sbjct: 174 DNDYNVTLEYTSSTRDTLLQVSKTAAHHTERLLPSIQKRALEMGDILCYATKARNSLAAE 233
Query: 386 VHNYMQKITYVSYVIKDAKLQFPVFREAMVRQDD---IFADLKLVRGIGPAYRACLAEVV 442
+M+ IT ++ K Q + Q+D F L+L++ I Y + +AE +
Sbjct: 234 SIEFMRSITEITSDSHSVKSQI-----SETGQEDELATFDHLRLIQQIPYLYASFVAEAI 288
Query: 443 RRKASMKLYMGMAGQLAERLATKREVEVRRREEFLKA-NSVYIP 485
RR+ + + LA +A E E +RR + K+ +V+ P
Sbjct: 289 RRREWLDKVKQDSTTLANEMAIFHEEEAKRRRRWHKSIGAVFGP 332
>sp|Q4WY31|ATG11_ASPFU Autophagy-related protein 11 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg11
PE=3 SV=1
Length = 1264
Score = 38.5 bits (88), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 52/358 (14%)
Query: 179 GNLEQYYRVINQNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKLHPSL-QTATCK-- 235
GNLE ++ ND +K +QR D +E + + K+ P L + +T K
Sbjct: 113 GNLENRFQEAQTWANDLLK----EQRAALDGWQRALTTLESIPAPKVFPFLGRPSTPKEH 168
Query: 236 ------CLLDFVKEEHLRKSAETCSSSH----RQFENKVSQFKQIFDDVKRRVEELLNTR 285
L DFV ++K+ ++ RQ ++ + I D +R +++ L +
Sbjct: 169 RDRPTGTLRDFVDANEVQKAGAEAAAESSRFARQIDDVAEAVRGITADTQRLIDDQLPSG 228
Query: 286 ASLPIKNLEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSA 345
A L+ MI + + +S D V L ++ ++
Sbjct: 229 AD-AADGLQEMI-----------TFAKKISSDYEHVIALPNN------------QKTLAN 264
Query: 346 LGPMYDVHDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKL 405
+ + H + LP M I L+ + N ++M+ I+ + + D +
Sbjct: 265 ISRLALTHTQDLLPSMLDISAEIHAGLEEAVRRHNTAMKVALDHMRTISAIELRLADVQS 324
Query: 406 QFPVFREAMVRQDDIFADLKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATK 465
Q + Q D F + V + Y + L E VRR+ + + LAE +A
Sbjct: 325 QII----NLNVQSDAFDVVFSVYHMPMVYGSILVESVRRREFNEKMKADSLTLAEEMAVF 380
Query: 466 REVEVRRREEFLKANSVYIPRDILGSMGLYDTPNQCDVNIAPSDTNLLDIDISDLEVY 523
R+ E RRR+++LK+ +I S+ TP ++N+ D ++ +D+E Y
Sbjct: 381 RDEEQRRRKKWLKSMGDFI------SLTETTTPG-VEINLQGLDYEWPEVSRNDIESY 431
>sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens GN=RB1CC1 PE=1
SV=3
Length = 1594
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 23/232 (9%)
Query: 293 LEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDV 352
L+ MI R +NEQK + Q + + L D +S+ P +S
Sbjct: 372 LDQMIASCGRLVNEQKELAQGFLANQKRAENLKD--------ASVLPDLCLS-------- 415
Query: 353 HDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKLQFPVFRE 412
H ++ ++ KLLD Q +N ++ + +V+ A +
Sbjct: 416 ----HANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQA 471
Query: 413 AMVRQDDIFADLKLVRGIGPAYRA-CLA--EVVRRKASMKLYMGMAGQLAERLATKREVE 469
+ ++ +K+V + + CLA EVVRRK +K Y AG L + E E
Sbjct: 472 LLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAE 531
Query: 470 VRRREEFLKANSVYIPRDILGSMGLYDTPNQCDVNIAPSDTNLLDIDISDLE 521
+RE F K R+ L P+ C D L DI + DL+
Sbjct: 532 KSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQ 583
>sp|Q9ESK9|RBCC1_MOUSE RB1-inducible coiled-coil protein 1 OS=Mus musculus GN=Rb1cc1 PE=1
SV=3
Length = 1588
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 25/233 (10%)
Query: 293 LEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDV 352
L+ MI R +NEQK + Q + + L D +S+ P +S
Sbjct: 371 LDQMIASCSRLVNEQKELAQGFLANQMRAENLKD--------ASVLPDLCLS-------- 414
Query: 353 HDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKLQFPVFRE 412
H ++ ++ KLLD Q +N ++ + +V+ A +
Sbjct: 415 ----HANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQA 470
Query: 413 AMVRQDDIFADLKLVRGIGPAYRA-CLA--EVVRRKASMKLYMGMAGQLAERLATKREVE 469
+ ++ +++V + + CLA EVVRRK +K Y AG L + E E
Sbjct: 471 LLRLVIELLERVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAE 530
Query: 470 VRRREEFLKANSVYIPRDILGSMGLYDTPNQ-CDVNIAPSDTNLLDIDISDLE 521
+RE F K R+ L GL P+ C D L DI + DL+
Sbjct: 531 KSKRESFGKLFRKSFLRNRLFK-GLDSWPSSFCTQKPRKFDCELPDISLKDLQ 582
>sp|B5YEB0|PNP_DICT6 Polyribonucleotide nucleotidyltransferase OS=Dictyoglomus
thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
GN=pnp PE=3 SV=1
Length = 693
Score = 34.7 bits (78), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 235 KCLLDFVKEEHLRKSAETCSSSHRQ-----FENKVSQ-FKQIFDDVKRRVEELLNTRASL 288
+ +LD+V + +R + T S S RQ + KV + FK I+ ++ +V+E++N A
Sbjct: 244 RAVLDYVTVDQIRDAIFTPSKSERQKALEDLKKKVIEHFKPIYGEITAQVDEIINQEAK- 302
Query: 289 PIKNLEMMIKEHQRFINEQK-SIMQSLSKDVSTVKKL 324
K L ++ E +R ++ +K + ++ +S +V +K++
Sbjct: 303 --KILSQVVLEEKRRVDGRKLNEIRPVSCEVGVLKRV 337
>sp|Q5T9G4|ARM12_HUMAN Armadillo repeat-containing protein 12 OS=Homo sapiens GN=ARMC12
PE=2 SV=1
Length = 340
Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 184 YYRVINQNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKLHPS--LQTATCKCLLDFV 241
+Y V+ +YN+ Q +H L R ++L ++ +HP +Q CK ++
Sbjct: 266 HYHVVKWHYNE--------QSLHESLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQ 317
Query: 242 KEEHLRKSAETCSSSHRQFEN 262
+ LR +C S F+N
Sbjct: 318 YPQDLRARPSSCQPSRSYFKN 338
>sp|Q3UHU5|SOGA2_MOUSE Protein SOGA2 OS=Mus musculus GN=Soga2 PE=1 SV=1
Length = 1945
Score = 33.5 bits (75), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 231 TATCKCLLDFVKEEH--LRKSAETCSSSHRQFENKVSQFKQIFDDVKRRVEELLNTRASL 288
+A KC L FVKEE +RK + E ++ ++K ++ DV L A
Sbjct: 494 SADLKCQLQFVKEEASLMRKKMAKLGREKDELEQELQKYKSLYGDVD---SPLPTGEAGG 550
Query: 289 PIKNLEMMIKEHQRFINEQKSIM 311
P E +K + + E+ SI+
Sbjct: 551 PPSTREAELKLRLKLVEEEASIL 573
>sp|Q07427|K1C18_CARAU Keratin, type I cytoskeletal 18 OS=Carassius auratus GN=krt18 PE=2
SV=1
Length = 435
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 218 EKLRSVKLHPSLQTATCKCLLDFVKEEHLRKSAETCSSSHRQFENKVSQFKQIFDDVKRR 277
++L S +L+ A K L ++E +K E C S+F+ I DD++R+
Sbjct: 98 DRLASYLRSETLEQANSKLELK-IREALEKKGPEVCD---------YSRFQPIIDDLRRK 147
Query: 278 VEELL--NTRASLPIKNLEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDC 328
+ + N R L I N + + + + + SI Q + D++ ++K++DD
Sbjct: 148 IFDATSNNARLVLQIDNARLAADDFRVKYDSELSIRQGVEADIAGLRKVIDDT 200
>sp|B7GIU0|URK_ANOFW Uridine kinase OS=Anoxybacillus flavithermus (strain DSM 21510 /
WK1) GN=udk PE=3 SV=1
Length = 211
Score = 33.1 bits (74), Expect = 9.4, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 149 IYIRTQAKIEMCERLLREQKVQERAVEVGRGNLEQYYRVINQNYNDFM---KRYS 200
+Y+ T A I + RLLR+ K + R +E +EQY V+ +N F+ KRY+
Sbjct: 129 VYVDTDADIRIIRRLLRDIKERGRTLE---SVIEQYVNVVRPMHNQFIEPTKRYA 180
>sp|B9DNJ4|URK_STACT Uridine kinase OS=Staphylococcus carnosus (strain TM300) GN=udk
PE=3 SV=1
Length = 208
Score = 33.1 bits (74), Expect = 9.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 149 IYIRTQAKIEMCERLLREQKVQERAVEVGRGNLEQYYRVINQNYNDFM---KRYS 200
IY+ T A + + RL+R+ K + R++E +EQY V+ +N F+ KRY+
Sbjct: 128 IYVDTDADLRILRRLMRDTKERGRSME---SVIEQYLNVVRPMHNQFIEPTKRYA 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 318,920,784
Number of Sequences: 539616
Number of extensions: 13611417
Number of successful extensions: 53934
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 53332
Number of HSP's gapped (non-prelim): 838
length of query: 892
length of database: 191,569,459
effective HSP length: 127
effective length of query: 765
effective length of database: 123,038,227
effective search space: 94124243655
effective search space used: 94124243655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)