Query 002705
Match_columns 890
No_of_seqs 329 out of 2509
Neff 4.8
Searched_HMMs 29240
Date Tue Mar 26 17:51:31 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002705.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1422-1425//hhsearch_pdb/002705hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfn_A NAD kinase; structural 1.0 1 1 348.8 16.5 210 670-889 20-261 (365)
2 3afo_A NADH kinase POS5; alpha 1.0 1 1 325.0 15.4 225 659-889 10-243 (388)
3 1z0s_A Probable inorganic poly 1.0 1 1 268.1 13.5 167 682-889 18-187 (278)
4 1u0t_A Inorganic polyphosphate 1.0 1 1 254.4 14.9 191 689-889 3-202 (307)
5 2an1_A Putative kinase; struct 1.0 1 1 241.4 15.1 185 690-889 5-190 (292)
6 2i2c_A Probable inorganic poly 1.0 1 1 234.6 19.3 160 691-889 1-163 (272)
7 1yt5_A Inorganic polyphosphate 1.0 1 1 223.7 15.8 160 691-889 1-162 (258)
8 1ywf_A Phosphotyrosine protein 1.0 1 1 215.5 10.4 182 236-438 26-294 (296)
9 1xri_A AT1G05000; structural g 1.0 1 1 158.6 14.0 126 245-389 5-134 (151)
10 2f46_A Hypothetical protein; s 1.0 1 1 148.1 15.5 130 246-393 15-147 (156)
No 1
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=1.00 E-value=1 Score=348.81 Aligned_cols=210 Identities=40% Similarity=0.692 Sum_probs=175.2
Q ss_pred CCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH--CCCCCCCC---EE
Q ss_conf 86433598345663003677859999945990-28999999999982179919998476035541--28998531---00
Q 002705 670 SSLAFTHPSTQQQMLMWKTTPRTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFA--RIPGFGFV---QT 743 (890)
Q Consensus 670 s~~~~~~ps~~~~~L~W~~~pkkVlIV~K~~~-e~~e~a~eL~~~L~~~~gieV~Ve~~v~~~l~--~~pg~~~~---~~ 743 (890)
..+++..|++ |+|.|.++|++|+||+|+++ ++.+.++++++||.+ .|++|++|+.+++.+. ....+... ..
T Consensus 20 ~~~~~~~~~~--~~l~w~~~~k~I~iv~K~~~~~~~~~~~~l~~~L~~-~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~ 96 (365)
T 3pfn_A 20 TIMHIQDPAS--QRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLME-ENMIVYVEKKVLEDPAIASDESFGAVKKKFC 96 (365)
T ss_dssp TEEEEECTTT--CBEEESSCCCEEEEEECTTCGGGHHHHHHHHHHHHH-TSCEEEEEHHHHHSHHHHHCSTTHHHHHHCE
T ss_pred HCEEECCCCC--CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH-CCCEEEEEHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 2106438664--432068789889999517987899999999999987-8999999667844220022334432222221
Q ss_pred EECCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 00257334589942999983951899999834799996999807995335688933399999999848998886045655
Q 002705 744 FYLQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLR 823 (890)
Q Consensus 744 ~~~~~~~el~~~~DlVItLGGDGTIL~Aarlf~~~~pPILGINlGsLGFLt~~~~edl~e~L~~Il~G~y~l~g~~Ie~R 823 (890)
.+..+.+++.+.+|+||+||||||||+|+|++.+..+||||||+|+|||||+++++++++.|+++++|+|. +++|
T Consensus 97 ~~~~~~~~~~~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G~LGFLt~~~~~~~~~~l~~vl~g~~~-----v~~R 171 (365)
T 3pfn_A 97 TFREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAA-----VVLR 171 (365)
T ss_dssp EECTTTCCCTTTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESSSCTTTCCEESTTHHHHHHHHHHSCCB-----EEEE
T ss_pred CCCCCHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCE-----EEEE
T ss_conf 23467656265789899986818999999985267997899908997530464589999999999869976-----9998
Q ss_pred EEEEEEEEEC--------------------------CEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCE
Q ss_conf 5899999839--------------------------90337875311867895247889509999999795757795084
Q 002705 824 MRLCCEIFRN--------------------------GKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVRPVN 877 (890)
Q Consensus 824 mrLe~~I~r~--------------------------G~~~~~~~~~ALNEVVI~Rg~~s~li~ieIyVdge~it~vqgDG 877 (890)
+||+|++.+. |+.. ..++|||||+|+|+..++|+++++|+||+++++++|||
T Consensus 172 ~~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~ALNEvvI~r~~~~~m~~~~v~idg~~~~~~~aDG 249 (365)
T 3pfn_A 172 SRLKVRVVKELRGKKTAVHNGLGEKGSQAAGLDMDVGKQA--MQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDG 249 (365)
T ss_dssp CCEEEEEEC-----------------------------CE--EEEEESSEEEEECTTCSSCCCEEEEETTEEEEEECSSE
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEECCE
T ss_conf 6389999964566533223333333333334435699364--04472336999658877379999999999989994471
Q ss_pred EEECCCCCCCCC
Q ss_conf 998578997678
Q 002705 878 CFLNVKIFFFNY 889 (890)
Q Consensus 878 VIVSTPt~~~~~ 889 (890)
|||||||||--|
T Consensus 250 lIVSTPTGSTAY 261 (365)
T 3pfn_A 250 VIVSTPTGSTAY 261 (365)
T ss_dssp EEEECGGGGGTH
T ss_pred EEEECCCCHHHH
T ss_conf 898278657788
No 2
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=324.98 Aligned_cols=225 Identities=25% Similarity=0.439 Sum_probs=184.6
Q ss_pred CCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHC-C
Q ss_conf 7510011222786433598345663003677859999945990-2899999999998217-99199984760355412-8
Q 002705 659 GFSCNREKVTESSLAFTHPSTQQQMLMWKTTPRTVLVLKKPGP-ALMEEAKEVASFLYHQ-EKMNILVEPDVHDIFAR-I 735 (890)
Q Consensus 659 ~~sc~r~~~~~s~~~~~~ps~~~~~L~W~~~pkkVlIV~K~~~-e~~e~a~eL~~~L~~~-~gieV~Ve~~v~~~l~~-~ 735 (890)
..+|+.+..+.....+.+|+.+++.|.|.+++++|+||+|+++ +..+.+.++++||.++ .+++|++++..++.+.. .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~k~V~II~n~~~~~~~~~~~~l~~~L~~~~~gi~V~ve~~~a~~l~~~~ 89 (388)
T 3afo_A 10 IKPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWTPSTREAMVEFITHLHESYPEVNVIVQPDVAEEISQDF 89 (388)
T ss_dssp EEEGGGSCCCCCCEEEC----CCEEEECSSCCCEEEEEECTTCHHHHHHHHHHHHHHHHHCTTCEEECCHHHHHHHHTTC
T ss_pred EEEHHHCCCCCCCCEEECCCHHHEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
T ss_conf 01475657666866174742341152726777699999808998999999999999997379839999476666543310
Q ss_pred CCCC-----CCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCC-CEEEEECCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9985-----31000025733458994299998395189999983479999-69998079953356889333999999998
Q 002705 736 PGFG-----FVQTFYLQDTSDLHERVDFVACLGGDGVILHASNLFRGAVP-PVISFNLGSLGFLTSHPFEDYRQDLRQVI 809 (890)
Q Consensus 736 pg~~-----~~~~~~~~~~~el~~~~DlVItLGGDGTIL~Aarlf~~~~p-PILGINlGsLGFLt~~~~edl~e~L~~Il 809 (890)
+... ....++.....+..+.+|+||+||||||+|+|++.+.+..+ ||||||+|+||||++++++++++.|++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~lGFLt~~~~~~~~~al~~il 169 (388)
T 3afo_A 90 KSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVI 169 (388)
T ss_dssp CSCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECSSCCSSCCEEGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 22223344333322334223303588889998083999999998505699829999799865477588678999999986
Q ss_pred CCCCCCCCCEEEEEEEEEEEEEECCEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCC
Q ss_conf 48998886045655589999983990337875311867895247889509999999795757795084998578997678
Q 002705 810 YGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVRPVNCFLNVKIFFFNY 889 (890)
Q Consensus 810 ~G~y~l~g~~Ie~RmrLe~~I~r~G~~~~~~~~~ALNEVVI~Rg~~s~li~ieIyVdge~it~vqgDGVIVSTPt~~~~~ 889 (890)
+|+| .++.|+||+|++.++|+... ...+|||||+|.|+..++|+++++++||+++++++||||||||||||--|
T Consensus 170 ~g~~-----~~~~r~~L~~~v~~~~~~~~-~~~~ALNev~i~~~~~~~~~~~~v~id~~~~~~~~~DGliVsTPTGSTAY 243 (388)
T 3afo_A 170 SSRA-----KCLHRTRLECHLKKKDSNSS-IVTHAMNDIFLHRGNSPHLTNLDIFIDGEFLTRTTADGVALATPTGSTAY 243 (388)
T ss_dssp TTCC-----EEEEECCEEEEEECTTCCCC-EEEEESSEEEEECTTCSSCEEEEEEETTEEEEEEEEEEEEEECTGGGGTH
T ss_pred CCCC-----EEEEEEEEEEEEEECCCCCH-HHHEEECEEEEECCCCCCEEEEEEEECCEEEEEECCCEEEEECCCCHHHH
T ss_conf 6981-----69986679999971894110-01200036999538987289999999999987544886899278747899
No 3
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=1.00 E-value=1 Score=268.06 Aligned_cols=167 Identities=19% Similarity=0.284 Sum_probs=143.5
Q ss_pred HHHCCCC---CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCE
Q ss_conf 6300367---7859999945990289999999999821799199984760355412899853100002573345899429
Q 002705 682 QMLMWKT---TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDF 758 (890)
Q Consensus 682 ~~L~W~~---~pkkVlIV~K~~~e~~e~a~eL~~~L~~~~gieV~Ve~~v~~~l~~~pg~~~~~~~~~~~~~el~~~~Dl 758 (890)
.++.|-- ..++|+|+.|+.++ +.++.+||.+ .|++|.+++.... ..+.+|+
T Consensus 18 ~~~~~~~~~~~~mki~iv~~~~~~----~~~l~~~L~~-~g~~v~~~~~~~~---------------------~~~~~Dl 71 (278)
T 1z0s_A 18 ENLYFQGGGGGGMRAAVVYKTDGH----VKRIEEALKR-LEVEVELFNQPSE---------------------ELENFDF 71 (278)
T ss_dssp ------------CEEEEEESSSTT----HHHHHHHHHH-TTCEEEEESSCCG---------------------GGGGSSE
T ss_pred CEEEECCCCCCCEEEEEEECCCHH----HHHHHHHHHH-CCCEEEECCCCCC---------------------CCCCCCE
T ss_conf 037884898663699999689079----9999999998-8999997142124---------------------4579889
Q ss_pred EEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCEECC
Q ss_conf 99983951899999834799996999807995335688933399999999848998886045655589999983990337
Q 002705 759 VACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMP 838 (890)
Q Consensus 759 VItLGGDGTIL~Aarlf~~~~pPILGINlGsLGFLt~~~~edl~e~L~~Il~G~y~l~g~~Ie~RmrLe~~I~r~G~~~~ 838 (890)
||+||||||+|+|+|.+.+. +||+|||+|+||||++++++++++.|+++++ +| .++.|+||++ +.+ +.
T Consensus 72 vIvlGGDGT~L~aa~~~~~~-~PilGIN~G~lGFLt~~~~~~~~~~l~~l~~-~~-----~i~~r~~L~~-v~~--~~-- 139 (278)
T 1z0s_A 72 IVSVGGDGTILRILQKLKRC-PPIFGINTGRVGLLTHASPENFEVELKKAVE-KF-----EVERFPRVSC-SAM--PD-- 139 (278)
T ss_dssp EEEEECHHHHHHHHTTCSSC-CCEEEEECSSSCTTCCBBTTBCHHHHHHHHH-HC-----CEEEECCEEE-TTE--EE--
T ss_pred EEEECCCHHHHHHHHHHCCC-CCEEEECCCCCCCCCCCCHHHHHHHHHHHHH-HC-----EEEEEEEEEE-EEC--CC--
T ss_conf 99988878999999985799-8499987998763553687899999999984-08-----5988579999-978--98--
Q ss_pred CCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCC
Q ss_conf 875311867895247889509999999795757795084998578997678
Q 002705 839 GKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVRPVNCFLNVKIFFFNY 889 (890)
Q Consensus 839 ~~~~~ALNEVVI~Rg~~s~li~ieIyVdge~it~vqgDGVIVSTPt~~~~~ 889 (890)
.+||||++|.|+..++|+++++++|++++++++||||||||||||-.|
T Consensus 140 ---~~ALNEv~I~~~~~~~~~~~~v~idg~~~~~~~~DGlIVsTPTGSTAY 187 (278)
T 1z0s_A 140 ---VLALNEIAVLSRKPAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGY 187 (278)
T ss_dssp ---EEESSEEEEEESSTTCCEEEEEEETTEEEEEEEESEEEEEESGGGGTH
T ss_pred ---CEEEEEEEEECCCCCCEEEEEEEECCEEEEEEECCEEEEECCCCHHHH
T ss_conf ---279999999438876279999999999999996474999568761577
No 4
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=1.00 E-value=1 Score=254.36 Aligned_cols=191 Identities=23% Similarity=0.291 Sum_probs=154.6
Q ss_pred CCCEEEEEECCCH-HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH---CCC----CCC-CCEEEECCCCCCCCCCCCEE
Q ss_conf 7859999945990-28999999999982179919998476035541---289----985-31000025733458994299
Q 002705 689 TPRTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFA---RIP----GFG-FVQTFYLQDTSDLHERVDFV 759 (890)
Q Consensus 689 ~pkkVlIV~K~~~-e~~e~a~eL~~~L~~~~gieV~Ve~~v~~~l~---~~p----g~~-~~~~~~~~~~~el~~~~DlV 759 (890)
++++|+||.|+.+ +..+.+.++.+||.+ .|++|.+++...+.+. ..+ ..+ ....+ . ......+.+|+|
T Consensus 3 ~m~ki~iI~n~~~~~~~~~~~~l~~~L~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~~~~~~~d~v 79 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDEATETARRVEKVLGD-NKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVV-D-ADQHAADGCELV 79 (307)
T ss_dssp --CEEEEEESSSGGGGSHHHHHHHHHHHT-TTCEEEEEC-------------------------------------CCCE
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHH-CCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCEE
T ss_conf 88789999818987899999999999998-89999996343443200223432212346431002-4-310124588999
Q ss_pred EEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCEECCC
Q ss_conf 99839518999998347999969998079953356889333999999998489988860456555899999839903378
Q 002705 760 ACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPG 839 (890)
Q Consensus 760 ItLGGDGTIL~Aarlf~~~~pPILGINlGsLGFLt~~~~edl~e~L~~Il~G~y~l~g~~Ie~RmrLe~~I~r~G~~~~~ 839 (890)
|++|||||+|++++.+.+..+|+||||+|++|||+++.++++++.++.+++|+| .++.|++|++.+.++|+..
T Consensus 80 i~~GGDGT~l~a~~~~~~~~~pvlgi~~G~~gfl~~~~~~~~~~~~~~i~~g~~-----~~~~r~~l~~~v~~~g~~~-- 152 (307)
T 1u0t_A 80 LVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDY-----RVEDRLTLDVVVRQGGRIV-- 152 (307)
T ss_dssp EEEECHHHHHHHHHHHHHHTCCEEEEECSSCCSSCSEEGGGHHHHHHHHHHTCC-----EEEEECCEEEEEEETTEEE--
T ss_pred EEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-----EEEEEEEEEEEEEECCCCE--
T ss_conf 999288999999997446899799996998762763697899999999984995-----7999789999998276312--
Q ss_pred CCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCC
Q ss_conf 75311867895247889509999999795757795084998578997678
Q 002705 840 KVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVRPVNCFLNVKIFFFNY 889 (890)
Q Consensus 840 ~~~~ALNEVVI~Rg~~s~li~ieIyVdge~it~vqgDGVIVSTPt~~~~~ 889 (890)
...+||||++|.++..++++++++++||++++++++||+||||||||--|
T Consensus 153 ~~~~ALNev~i~~~~~~~~~~~~v~idg~~~~~~~~dGlivsTptGSTaY 202 (307)
T 1u0t_A 153 NRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAY 202 (307)
T ss_dssp EEEEESSEEEEECSSSSSCEEEEEESSSSEEEEEEESEEEEECTGGGGTH
T ss_pred ECEEEEEEEEEECCCCCEEEEEEEEECCEEEEEECCCEEEECCCHHHHHH
T ss_conf 02014535898048876189999999999988872899998650066899
No 5
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=1.00 E-value=1 Score=241.38 Aligned_cols=185 Identities=19% Similarity=0.303 Sum_probs=152.2
Q ss_pred CCEEEEEECCCHH-HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHH
Q ss_conf 8599999459902-899999999998217991999847603554128998531000025733458994299998395189
Q 002705 690 PRTVLVLKKPGPA-LMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI 768 (890)
Q Consensus 690 pkkVlIV~K~~~e-~~e~a~eL~~~L~~~~gieV~Ve~~v~~~l~~~pg~~~~~~~~~~~~~el~~~~DlVItLGGDGTI 768 (890)
.++++|+.|+.++ ..+.+.++.+||.+ .|++|.+++.....+. .++.. .+ ......+.+|+||++|||||+
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~-~g~~v~~~~~~~~~~~-~~~~~---~~---~~~~~~~~~D~vi~~GGDGT~ 76 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCD-QGYEVIVEQQIAHELQ-LKNVP---TG---TLAEIGQQADLAVVVGGDGNM 76 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHH-TTCEEEEEHHHHHHTT-CSSCC---EE---CHHHHHHHCSEEEECSCHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHH-CCCEEEEECCHHHHCC-CCCCC---CC---CHHHCCCCCCEEEEECCCHHH
T ss_conf 8599999759987899999999999998-8999999524032215-45554---44---533416698899998284999
Q ss_pred HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCEECCCCCCCEEEEE
Q ss_conf 99998347999969998079953356889333999999998489988860456555899999839903378753118678
Q 002705 769 LHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEV 848 (890)
Q Consensus 769 L~Aarlf~~~~pPILGINlGsLGFLt~~~~edl~e~L~~Il~G~y~l~g~~Ie~RmrLe~~I~r~G~~~~~~~~~ALNEV 848 (890)
|++++.+.+..+|+||||+|++|||+++.+++++++++.+++|+ +.++.|++|++.+.++++.. ...+||||+
T Consensus 77 l~a~~~~~~~~~P~lGI~~Gt~gfla~~~~~~~~~al~~i~~g~-----~~~~~r~~l~~~~~~~~~~~--~~~~alnev 149 (292)
T 2an1_A 77 LGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGR-----YISEKRFLLEAQVCQQDRQK--RISTAINEV 149 (292)
T ss_dssp HHHHHHHTTSSCEEEEBCSSSCCSSCCBCTTSHHHHHHHHHTTC-----EEEEEEEEEEEEEECC------CEEEESSEE
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC-----CEEEEEEEEEEEEEECCCEE--EEEEEEEEE
T ss_conf 99999853679989999899766378688789999999998699-----77999379999998389147--613686008
Q ss_pred EECCCCCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCC
Q ss_conf 95247889509999999795757795084998578997678
Q 002705 849 VVDRGSNPYLSKIECYEHDRLITKVRPVNCFLNVKIFFFNY 889 (890)
Q Consensus 849 VI~Rg~~s~li~ieIyVdge~it~vqgDGVIVSTPt~~~~~ 889 (890)
+|.++..++++++++++||++++++++||+||||||||--|
T Consensus 150 ~i~~~~~~~~~~~~v~idg~~~~~~~~dglivstptGSTay 190 (292)
T 2an1_A 150 VLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAY 190 (292)
T ss_dssp EEEESSTTCCEEEEEEETTEEEEEEEESEEEEECTGGGGTH
T ss_pred EEECCCCCCEEEEEEEECCEEEEEEEECEEEECCCCCHHHH
T ss_conf 99248987269999999999999998578999887746999
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=1.00 E-value=1 Score=234.58 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=138.6
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHH
Q ss_conf 59999945990289999999999821799199984760355412899853100002573345899429999839518999
Q 002705 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVILH 770 (890)
Q Consensus 691 kkVlIV~K~~~e~~e~a~eL~~~L~~~~gieV~Ve~~v~~~l~~~pg~~~~~~~~~~~~~el~~~~DlVItLGGDGTIL~ 770 (890)
++++|+.|+.++..+.+.++.+||.+ .|+++ + .+.+|+||++|||||+|+
T Consensus 1 mki~ii~n~~~~~~~~~~~l~~~l~~-~g~~v--~---------------------------~~~~D~vv~lGGDGT~l~ 50 (272)
T 2i2c_A 1 MKYMITSKGDEKSDLLRLNMIAGFGE-YDMEY--D---------------------------DVEPEIVISIGGDGTFLS 50 (272)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTT-SSCEE--C---------------------------SSSCSEEEEEESHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHH-CCCEE--C---------------------------CCCCCEEEEECCCHHHHH
T ss_conf 98999978977899999999999998-77870--7---------------------------778889999868599999
Q ss_pred HHHHCCCC--CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEC-CEECCCCCCCEEEE
Q ss_conf 99834799--9969998079953356889333999999998489988860456555899999839-90337875311867
Q 002705 771 ASNLFRGA--VPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRN-GKAMPGKVFDVLNE 847 (890)
Q Consensus 771 Aarlf~~~--~pPILGINlGsLGFLt~~~~edl~e~L~~Il~G~y~l~g~~Ie~RmrLe~~I~r~-G~~~~~~~~~ALNE 847 (890)
+++.+.+. .+||||||+|++|||+++.++++++.++.+++|+| .++.|++|++++.+. |+.. ....||||
T Consensus 51 aa~~~~~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g~~-----~i~~r~~L~~~v~~~~g~~~--~~~~ALNe 123 (272)
T 2i2c_A 51 AFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEY-----QKVSYPLLKTTVKYGIGKKE--ATYLALNE 123 (272)
T ss_dssp HHHHTGGGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTTCC-----EEEEEEEEEEEEEESSSCCE--EEEEESSE
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-----EEEEEEEEEEEEEECCCCEE--EHHHHHHH
T ss_conf 999876537999799996998775772897899999999985997-----79999879999991799288--17766437
Q ss_pred EEECCCCCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCC
Q ss_conf 895247889509999999795757795084998578997678
Q 002705 848 VVVDRGSNPYLSKIECYEHDRLITKVRPVNCFLNVKIFFFNY 889 (890)
Q Consensus 848 VVI~Rg~~s~li~ieIyVdge~it~vqgDGVIVSTPt~~~~~ 889 (890)
++|.+. .+++.+++++||++++++++||+||||||||.-|
T Consensus 124 v~i~~~--~~~~~~~i~idg~~~~~~~~DGlivsTptGSTaY 163 (272)
T 2i2c_A 124 STVKSS--GGPFVVDVVINDIHFERFRGDGLCMSTPSGTTAY 163 (272)
T ss_dssp EEEEES--SSCEEEEEEETTEEEEEEEESEEEEECTGGGGTH
T ss_pred HHHCCC--CCEEEEEEEECCEEEEEEECCEEEEECCCCHHHH
T ss_conf 620256--7179999999999999977799999716658999
No 7
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=223.66 Aligned_cols=160 Identities=18% Similarity=0.156 Sum_probs=130.2
Q ss_pred CEEEEEECCCHHH--HHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHH
Q ss_conf 5999994599028--99999999998217991999847603554128998531000025733458994299998395189
Q 002705 691 RTVLVLKKPGPAL--MEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI 768 (890)
Q Consensus 691 kkVlIV~K~~~e~--~e~a~eL~~~L~~~~gieV~Ve~~v~~~l~~~pg~~~~~~~~~~~~~el~~~~DlVItLGGDGTI 768 (890)
++++|+.||.... .+.+.++.++|. ++++... + ....+++|+||++|||||+
T Consensus 1 mki~ii~Np~~~~~~~~~~~~i~~~l~---~~~~~~~----------------------~-~~~~~~~D~vv~~GGDGTl 54 (258)
T 1yt5_A 1 MKIAILYREEREKEGEFLKEKISKEHE---VIEFGEA----------------------N-APGRVTADLIVVVGGDGTV 54 (258)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHTTTSE---EEEEEES----------------------S-SCSCBCCSEEEEEECHHHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHC---CCCEECC----------------------C-CCCCCCCCEEEEEECCHHH
T ss_conf 989999708981689999999999851---7805315----------------------5-2346798999999284899
Q ss_pred HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCEECCCCCCCEEEEE
Q ss_conf 99998347999969998079953356889333999999998489988860456555899999839903378753118678
Q 002705 769 LHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEV 848 (890)
Q Consensus 769 L~Aarlf~~~~pPILGINlGsLGFLt~~~~edl~e~L~~Il~G~y~l~g~~Ie~RmrLe~~I~r~G~~~~~~~~~ALNEV 848 (890)
|++++.+.+ .+|+||||+|++|||+++.+++++++++++++|+| .++.|++|++.+.+ + ..+||||+
T Consensus 55 l~~a~~~~~-~~PilGIn~G~~Gfl~~~~~~~~~~al~~i~~g~~-----~i~~r~~l~~~~~~--~-----~~~alNev 121 (258)
T 1yt5_A 55 LKAAKKAAD-GTPMVGFKAGRLGFLTSYTLDEIDRFLEDLRNWNF-----REETRWFIQIESEL--G-----NHLALNDV 121 (258)
T ss_dssp HHHHTTBCT-TCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTTCC-----EEEEEEEEEEEETT--E-----EEEESSEE
T ss_pred HHHHHHHCC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-----EEEEEEEEEEEECC--C-----CCEEEEEE
T ss_conf 999998379-99899997999872673787899999999975992-----69998899999958--8-----30355578
Q ss_pred EECCCCCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCC
Q ss_conf 95247889509999999795757795084998578997678
Q 002705 849 VVDRGSNPYLSKIECYEHDRLITKVRPVNCFLNVKIFFFNY 889 (890)
Q Consensus 849 VI~Rg~~s~li~ieIyVdge~it~vqgDGVIVSTPt~~~~~ 889 (890)
+|.++...+++++++++||++++++++||+||||||||--|
T Consensus 122 ~i~~~~~~~~~~~~v~idg~~~~~~~~dGlivsTptGSTaY 162 (258)
T 1yt5_A 122 TLERDLSGKMVEIEVEVEHHSSMWFFADGVVISTPTGSTAY 162 (258)
T ss_dssp EEECCTTSCCEEEEEEETTSCCEEEEESEEEEECTGGGGTT
T ss_pred EEECCCCCCEEEEEEEECCEEEEEEECCEEEEECCCCCHHH
T ss_conf 97037887369999999999999997357999727873777
No 8
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=1.00 E-value=1 Score=215.47 Aligned_cols=182 Identities=14% Similarity=0.116 Sum_probs=140.9
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCC---CHHHHHHHHHCCCCEEEECCCCCCCCCCH-HHHHHHH
Q ss_conf 8999987678883038835887655567985509985999---97429999975982999869884257520-5665865
Q 002705 236 GDDYPIHTLFANWSPVYLSNSKDDIASKDSEVTFCRGGQV---TEEGLKWLMEKGYKTIVDIRAERVKDNFY-EAAIDDA 311 (890)
Q Consensus 236 ~~g~p~~~~i~Nf~~V~ls~~~~~~~~~~~e~~LyRSGqp---T~edl~~L~~lGIKTVIDLRse~~e~~~~-~a~e~e~ 311 (890)
.+|.+||++++++... +++ +.||||++| +++++++|+++||+||||||++. |.... + .
T Consensus 26 l~g~~NfRDlGGy~t~-----------vr~-G~lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~-E~~~~~p-----d 87 (296)
T 1ywf_A 26 LPGAWNFRDVADTATA-----------LRP-GRLFRSSELSRLDDAGRATLRRLGITDVADLRSSR-EVARRGP-----G 87 (296)
T ss_dssp CTTCCSCEEGGGTCTT-----------SCT-TSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHH-HHHHHCS-----C
T ss_pred CCCCCCCCCCCCCCCC-----------CCC-CCEECCCCCCCCCHHHHHHHHHCCCCEEEECCCHH-HHHCCCC-----C
T ss_conf 8998836457886224-----------367-62323577453999999999967998899892856-6211389-----8
Q ss_pred HHCCCCEEEEEECCCCCC-------C-------------------CH--------------------------HHHHHHH
Q ss_conf 411993999971689999-------9-------------------99--------------------------9999999
Q 002705 312 ILSGKVELIKIPVEVRTA-------P-------------------TM--------------------------EQVEKFA 339 (890)
Q Consensus 312 ~e~~GI~yIhIPV~d~~~-------P-------------------s~--------------------------E~i~afl 339 (890)
....|++|+|+|+.+... | .. ..+.+++
T Consensus 88 ~~~~Gi~~~~iPi~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l 167 (296)
T 1ywf_A 88 RVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVV 167 (296)
T ss_dssp CCCTTCEEEECCCCCSCC-------------------------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 78788779993376643321123442036788886410122331001100110089999999999985323689999999
Q ss_pred HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHH------------------------
Q ss_conf 99854999959880846999399999999996799999999985001212232537------------------------
Q 002705 340 SLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLLKDST------------------------ 395 (890)
Q Consensus 340 ~ii~d~~~~PVLVHC~AGKDRTGaLvaLlr~~~Gvs~edai~dyl~s~~~~~~~~~------------------------ 395 (890)
+.+. . ++|+||||++||||||+++++++...|++.++|++||++++.++....+
T Consensus 168 ~~l~-~-~~pvl~HC~aGkDRTG~~~alll~~~g~~~~~I~~DY~~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T 1ywf_A 168 TLLA-A-GRPVLTHCFAGKDRTGFVVALVLEAVGLDRDVIVADYLRSNDSVPQLRARISEMIQQRFDTELAPEVVTFTKA 245 (296)
T ss_dssp HHHH-T-TCCEEEECSSSSSHHHHHHHHHHHHTTCCHHHHHHHHHGGGGGHHHHHHHHHHHHHTTTTSCCCHHHHHHHHT
T ss_pred HHHC-C-CCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 9754-4-8988987888776504899999998199999999999999987999999999998752133334257776423
Q ss_pred -------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf -------7799874110112220234177857743024663122321201
Q 002705 396 -------RTRKLKASAGKFLLEEKYETVKENQDEIQTKNGVFGFGLSVDM 438 (890)
Q Consensus 396 -------~~~k~~~~~~~~~l~s~~g~~e~~l~~~~~~~~~~~~~~r~nl 438 (890)
+.+++.|.+++..++++||+++.|+... |+++.+++++|.++
T Consensus 246 ~~~~~~~~~~~~~l~~~l~~i~~~yGs~~~YL~~~-Gl~~~~i~~LR~~l 294 (296)
T 1ywf_A 246 RLSDGVLGVRAEYLAAARQTIDETYGSLGGYLRDA-GISQATVNRMRGVL 294 (296)
T ss_dssp TTCHHHHSCCHHHHHHHHHHHHHHHSSHHHHHHHT-TCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHC-CCCHHHHHHHHHHH
T ss_conf 32124506689999999999999809999999886-99999999999985
No 9
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=1.00 E-value=1 Score=158.58 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=103.9
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 88830388358876555679855099859999742999997598299986988425752056658654119939999716
Q 002705 245 FANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPV 324 (890)
Q Consensus 245 i~Nf~~V~ls~~~~~~~~~~~e~~LyRSGqpT~edl~~L~~lGIKTVIDLRse~~e~~~~~a~e~e~~e~~GI~yIhIPV 324 (890)
..||+.|. +.||||++|++.+++.|+++||++|||||.+. +.. ...+.++..|++|+|+|+
T Consensus 5 p~n~~~v~--------------~~l~~s~~~~~~d~~~L~~~gi~~Vi~l~~~~-e~~----~~~~~~~~~gi~~~~ipi 65 (151)
T 1xri_A 5 PLNFSMVD--------------NGIFRSGFPDSANFSFLQTLGLRSIIYLCPEP-YPE----SNLQFLKSNGIRLFQFGI 65 (151)
T ss_dssp CTTCEEEE--------------TTEEEESCCCHHHHHHHHHHTCSEEEECCSSC-CCH----HHHHHHHHHTCEEEECCC
T ss_pred CCCCCEEC--------------CCEEECCCCCCCCHHHHHHCCCCEEEECCCCC-CCH----HHHHHHHHCCCEEEECCC
T ss_conf 75737557--------------98277899681288999878998899788987-673----688999865985996262
Q ss_pred CCCC----CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 8999----9999999999999854999959880846999399999999996799999999985001212
Q 002705 325 EVRT----APTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDV 389 (890)
Q Consensus 325 ~d~~----~Ps~E~i~afl~ii~d~~~~PVLVHC~AGKDRTGaLvaLlr~~~Gvs~edai~dyl~s~~~ 389 (890)
.+.. .++.+++.++++.+.+..++|+||||++|+||||+++++++...|++.++|+++|......
T Consensus 66 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~~~~a~~~~~~~~~~ 134 (151)
T 1xri_A 66 EGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAA 134 (151)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTBCHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf 114576655799999999999975899878988898997899999999998099999999999985588
No 10
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=1.00 E-value=1 Score=148.06 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=106.1
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC--HHHHHHHHHHCCCCE-EEEE
Q ss_conf 8830388358876555679855099859999742999997598299986988425752--056658654119939-9997
Q 002705 246 ANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNF--YEAAIDDAILSGKVE-LIKI 322 (890)
Q Consensus 246 ~Nf~~V~ls~~~~~~~~~~~e~~LyRSGqpT~edl~~L~~lGIKTVIDLRse~~e~~~--~~a~e~e~~e~~GI~-yIhI 322 (890)
.||+.|. +.||||+++++++++.|+++||++|||||++. |... ....+.+.++..||. |+|+
T Consensus 15 ~n~~~v~--------------~~l~rs~~~~~~d~~~L~~~Gi~~IIdlR~~~-E~~~~p~~~~~~~~~~~~gi~~~~~i 79 (156)
T 2f46_A 15 MAILKLD--------------EHLYISPQLTKADAEQIAQLGIKTIICNRPDR-EEESQPDFAQIKQWLEQAGVTGFHHQ 79 (156)
T ss_dssp CCCEEEE--------------TTEEEESCCCGGGHHHHHHHTCCEEEECSCTT-SSTTCCCHHHHHHHHGGGTCCEEEEC
T ss_pred CCCEECC--------------CCEEECCCCCHHHHHHHHHCCCCEEEECCCCC-CCCCCCCHHHHHHHHHHCCCHHHEEC
T ss_conf 5714526--------------88788089899999999988997999898975-35689867999999998797764577
Q ss_pred ECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 16899999999999999998549999598808469993999999999967999999999850012122325
Q 002705 323 PVEVRTAPTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLLKD 393 (890)
Q Consensus 323 PV~d~~~Ps~E~i~afl~ii~d~~~~PVLVHC~AGKDRTGaLvaLlr~~~Gvs~edai~dyl~s~~~~~~~ 393 (890)
|+.+. .++.+++.+|.+.+. ..++||||||++|+ |+++++++++...|++.++|++.+-.....+..-
T Consensus 80 Pv~~~-~~~~~~~~~~~~~l~-~~~~pVlvHC~sG~-Rs~~l~al~l~~~g~~~~~a~~~~~~~g~~l~~~ 147 (156)
T 2f46_A 80 PVTAR-DIQKHDVETFRQLIG-QAEYPVLAYCRTGT-RCSLLWGFRRAAEGMPVDEIIRRAQAAGVNLENF 147 (156)
T ss_dssp CCCTT-TCCHHHHHHHHHHHH-TSCSSEEEECSSSH-HHHHHHHHHHHHTTCCHHHHHHHHHHTTCCCGGG
T ss_pred CCCCC-CCCHHHHHHHHHHHH-HCCCCEEEECCCCC-CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHH
T ss_conf 45789-999999999999997-08998998899998-7899999999981989999999999829981789
Done!