Query 002706
Match_columns 890
No_of_seqs 303 out of 667
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 05:29:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002706.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002706hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 1E-264 2E-269 2280.9 71.4 821 57-890 84-918 (918)
2 PLN02264 lipoxygenase 100.0 2E-262 3E-267 2262.6 68.1 815 68-890 85-919 (919)
3 PLN02337 lipoxygenase 100.0 1E-258 3E-263 2238.3 70.4 822 56-890 20-866 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 5E-205 1E-209 1784.5 34.2 661 204-874 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 2.7E-34 5.9E-39 279.1 12.5 128 56-195 2-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.1 3.7E-10 7.9E-15 104.9 10.3 82 92-182 20-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.7 3.8E-08 8.3E-13 91.7 8.3 63 129-193 47-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.5 5.7E-07 1.2E-11 84.9 8.7 64 128-193 49-116 (116)
9 cd02899 PLAT_SR Scavenger rece 98.2 6.1E-06 1.3E-10 78.5 8.9 77 92-182 20-98 (109)
10 cd01753 PLAT_LOX PLAT domain o 97.8 0.00013 2.9E-09 69.6 10.4 83 92-184 20-106 (113)
11 cd01756 PLAT_repeat PLAT/LH2 d 97.8 0.00022 4.7E-09 68.6 11.8 93 92-193 20-118 (120)
12 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.6 0.00021 4.6E-09 68.6 8.1 48 138-185 49-100 (114)
13 cd01752 PLAT_polycystin PLAT/L 97.6 0.00051 1.1E-08 66.1 10.5 86 92-185 20-109 (120)
14 cd01754 PLAT_plant_stress PLAT 97.3 0.00074 1.6E-08 66.2 8.2 57 127-185 56-119 (129)
15 cd01755 PLAT_lipase PLAT/ LH2 38.0 1.5E+02 0.0033 28.7 8.0 50 129-178 46-105 (120)
16 TIGR03124 ctirate_citX holo-AC 37.6 15 0.00032 37.9 1.0 54 197-266 81-134 (165)
17 PF07157 DNA_circ_N: DNA circu 37.2 12 0.00027 35.1 0.3 70 638-720 11-90 (93)
18 PF10281 Ish1: Putative stress 24.7 1.1E+02 0.0024 23.7 3.6 31 691-730 5-35 (38)
19 PF10474 DUF2451: Protein of u 24.2 44 0.00095 36.3 1.8 24 672-701 178-201 (234)
20 KOG2080 Uncharacterized conser 22.8 41 0.00089 42.4 1.3 46 139-184 1020-1069(1295)
21 PF12588 PSDC: Phophatidylseri 21.4 1.4E+02 0.0031 30.1 4.7 126 688-834 11-139 (141)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=1e-264 Score=2280.90 Aligned_cols=821 Identities=50% Similarity=0.934 Sum_probs=776.9
Q ss_pred cceeEEeeecc-eeeeEEEEecccCCCcc-ccccccc-cEEEEEEecccCCCCCCcc---cccccccccCCCCCCCCceE
Q 002706 57 IKAIFNLTEKS-TKVKAVITVKPIIPDPL-ALSSLVG-ALGLELVSAELDPKTGEEK---PTIKGLALGVLGKDDDGNIK 130 (890)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g-~~~l~lvS~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 130 (890)
+||+|++|+++ ++++.+.+ ..+ +++|++| +|+|||||++++|+||+|| ++|++|+++.. .. +++++
T Consensus 84 i~~~v~~~~~~~~~~~~~~~------~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~~-~~-~~~~~ 155 (918)
T PLN02305 84 VRAVITIRKKIKEKITEKFE------DQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPS-ND-PHIVE 155 (918)
T ss_pred EEEEEEEEeecccchhhccc------chhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccCCC-CC-CCceE
Confidence 55555555554 44444332 234 6899999 9999999999999999555 89999998633 32 45779
Q ss_pred EEEEEecCCCCCCeeEEEEEeCCCCceeeeeEEEeecCCCcEEEeecccccCCCCCCcceEEeeCccccCCCCChhhHHH
Q 002706 131 YKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRL 210 (890)
Q Consensus 131 y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~l~~~ 210 (890)
|+++|+|+++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+++||||+||+|||++||++|++|
T Consensus 156 ~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~ 235 (918)
T PLN02305 156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDL 235 (918)
T ss_pred EEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcccccCeEeeccccCCCCCCccc-ccccccCCCCCCCCCCccCCCCCCCCCCCCCCCccC---CCc
Q 002706 211 RAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSV---SIY 286 (890)
Q Consensus 211 R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~-~~~rpvlgg~~~pyprR~rtgr~~~~~dp~~e~~~~---~~y 286 (890)
||+||++|||||+||||+||||||||||||||+||++ +++||||||++|||||||||||+|+++||.||||.. .+|
T Consensus 236 Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~Y 315 (918)
T PLN02305 236 RREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY 315 (918)
T ss_pred HHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcC
Confidence 9999999999999999999999999999999999999 999999999669999999999999999999999953 479
Q ss_pred cCCCCccCccccccchhchhHHhhhhhhHHHHHHhccCCCCCCCHHHHHHHhccCCCCCCCCCCchhhhhh-hh-hhHhh
Q 002706 287 VPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI-LP-ILFKT 364 (890)
Q Consensus 287 vPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 364 (890)
|||||+|+++|++||+++++|+++|.++|.|+++++.+..+|++|+||++||++|+++| .. ..+..+.+ +| .+.+.
T Consensus 316 vPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~-~~-~~~~~~~~p~~~~~~~~ 393 (918)
T PLN02305 316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLK-TE-EPKDIGLNPFLGNFMKQ 393 (918)
T ss_pred CCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCC-ch-hhhhhhcCCchHHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999 32 00222223 32 45555
Q ss_pred hccCCccccccCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHhhCCcc
Q 002706 365 VSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLM 444 (890)
Q Consensus 365 ~~~~~~~~l~fp~P~~~~~d~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~ 444 (890)
++++++.+||||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||+|||+..|+| +
T Consensus 394 i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~ 472 (918)
T PLN02305 394 VLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-M 472 (918)
T ss_pred hhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-C
Confidence 588899999999999999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred cHHHHHhCCcEEEeecccccccccccccCCCCceecccceeEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCC
Q 002706 445 TVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTD 524 (890)
Q Consensus 445 Tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VftP~d~~~~ 524 (890)
||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||++++++
T Consensus 473 TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~ 552 (918)
T PLN02305 473 TVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATT 552 (918)
T ss_pred cHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998777778899999877778
Q ss_pred chHHHHHHHHHhhhcchhhhhhhhhccccchhhHHHHHHhccCCCcCchhhccchhhhhhhhhHHHHHhcccCCCCcccc
Q 002706 525 SWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVET 604 (890)
Q Consensus 525 ~~~W~LAK~~v~~aD~~~HqlisHll~THlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~ 604 (890)
+|.|+||||||++||++|||+|+||++|||||||||||||||||++|||||||+||||+||+||++||++|||+||+||+
T Consensus 553 ~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~ 632 (918)
T PLN02305 553 HWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEA 632 (918)
T ss_pred chHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHhcccCCCccCCchHHHhcCCCCCCCCCCCcccccccCCCCchhhHHHHHHHHHHHHhhcccccc
Q 002706 605 TFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYT 684 (890)
Q Consensus 605 ~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~~~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI~~~V~~yv~~YY~ 684 (890)
+|++|+|+|+|++++|++.|+|++++||+||++|||+++|+++|||++|.|||||||+|||+||+||++||++||++||+
T Consensus 633 ~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~ 712 (918)
T PLN02305 633 CFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYS 712 (918)
T ss_pred eeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCCCcccCCCC
Q 002706 685 DPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTN 764 (890)
Q Consensus 685 sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p 764 (890)
+|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++
T Consensus 713 ~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp 792 (918)
T PLN02305 713 EPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKL 792 (918)
T ss_pred ChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhHhhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccCCCCC--CCCCcHHHHHHHHHHHHHHH
Q 002706 765 MPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEP--AWGDDPVIKAAFEKFNRKMQ 842 (890)
Q Consensus 765 ~P~~kkg~~~~~~l~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~ 842 (890)
||++ ++.+|++|+.+||++||++||++.||+.+|+++++||+|++||+|||++.++ .|+.|+++++||++|+++|+
T Consensus 793 ~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~ 870 (918)
T PLN02305 793 IPQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLE 870 (918)
T ss_pred CCCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHH
Confidence 9988 6778999999999999999999999999999999999999999999999876 79999999999999999999
Q ss_pred HHHHHHhhhcCCccccccCCCccCCceeeccCCCCCCCcCCCCccccC
Q 002706 843 ELEGIIDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI 890 (890)
Q Consensus 843 ~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 890 (890)
+||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 871 eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 871 EIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 999999999999999999999999999999999999999999999998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=1.6e-262 Score=2262.62 Aligned_cols=815 Identities=48% Similarity=0.905 Sum_probs=773.5
Q ss_pred eeeeEEEEecccCCC--------cc-ccccccc-cEEEEEEecccCCCCCCcc----cccccccccCCCCCCCCceEEEE
Q 002706 68 TKVKAVITVKPIIPD--------PL-ALSSLVG-ALGLELVSAELDPKTGEEK----PTIKGLALGVLGKDDDGNIKYKA 133 (890)
Q Consensus 68 ~~~~~~~~~~~~~~~--------~~-~~~~~~g-~~~l~lvS~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~y~v 133 (890)
++++++++++++++. .+ +++|++| +|+|||||++++|+||+|+ ++|++|+++. ... +++++|++
T Consensus 85 ~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~~-~~~-~~~~~y~~ 162 (919)
T PLN02264 85 FKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKKS-NIK-AERVHYTA 162 (919)
T ss_pred EEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhcccccCC-CCC-CCceEEEE
Confidence 566666666665432 24 6899999 9999999999999998433 9999999873 323 66789999
Q ss_pred EEecCCCCCCeeEEEEEeCCCCceeeeeEEEeecCCCcEEEeecccccCCCCCCcceEEeeCccccCCCCChhhHHHHHH
Q 002706 134 ELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAE 213 (890)
Q Consensus 134 ~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~~l~~~R~~ 213 (890)
+|+|+++||+||||+|+|.|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||++||++|++|||+
T Consensus 163 ~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~Re~ 242 (919)
T PLN02264 163 EFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALREK 242 (919)
T ss_pred EEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCcccccCeEeeccccCCCCCCccc-ccccccCCCCCCCCCCccCCCCCCCCCCCCCCCccC---CCccCC
Q 002706 214 ELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSV---SIYVPR 289 (890)
Q Consensus 214 EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~-~~~rpvlgg~~~pyprR~rtgr~~~~~dp~~e~~~~---~~yvPr 289 (890)
||++|||||+||||+||||||||+|||||+||++ +++||||||++|||||||||||+|+++||.+|||.. .+||||
T Consensus 243 eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iYvPr 322 (919)
T PLN02264 243 ELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYVPR 322 (919)
T ss_pred HHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCceeCCC
Confidence 9999999999999999999999999999999999 999999999669999999999999999999999954 479999
Q ss_pred CCccCccccccchhchhHHhhhhhhHHHHHHhccCCCCCCCHHHHHHHhccCCCCCCCCCCchhhhhh-hhhhHhhhccC
Q 002706 290 DEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI-LPILFKTVSNT 368 (890)
Q Consensus 290 De~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 368 (890)
||+|+++|+++|+++++||++|.++|.|+++++.+ +|+||+||++||++|+++| ....++..+.+ +|.+.+.++++
T Consensus 323 DE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~-~~~~~~~~~~~p~~~~~~~~~~~ 399 (919)
T PLN02264 323 DEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLK-LGFQDDIFKKFPLPKVVTTLQES 399 (919)
T ss_pred CCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCC-cchhhhHhhcCChHHHHHHhhhc
Confidence 99999999999999999999999999999998754 9999999999999999998 32112233334 44566666888
Q ss_pred CccccccCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHhhCCcccHHH
Q 002706 369 GKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNE 448 (890)
Q Consensus 369 ~~~~l~fp~P~~~~~d~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~Tl~~ 448 (890)
++.+||||+|++|++|+++|++|+|||||+|||+||++|+||++||++|+|||+.||+++|+||++||+..|+| +||+|
T Consensus 400 ~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G-~Tl~e 478 (919)
T PLN02264 400 SEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDG-LSVQQ 478 (919)
T ss_pred ccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCC-CcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred HHhCCcEEEeecccccccccccccCCCCceecccceeEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCCchHH
Q 002706 449 AIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLW 528 (890)
Q Consensus 449 al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W 528 (890)
||++|||||+||||++|||++++|.++++++|||+||||++++|+|+||||||+++++++++++++||||+++++++|.|
T Consensus 479 Al~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~d~~~~w~W 558 (919)
T PLN02264 479 ALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNWMW 558 (919)
T ss_pred HHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCCCCCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999999877666788999997777789999
Q ss_pred HHHHHHHhhhcchhhhhhhhhccccchhhHHHHHHhccCCCcCchhhccchhhhhhhhhHHHHHhcccCCCCcccccccC
Q 002706 529 TLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFP 608 (890)
Q Consensus 529 ~LAK~~v~~aD~~~HqlisHll~THlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~ 608 (890)
+||||||++||++|||+|+||++||+++|||||||+||||.+|||||||.||||+||+||++||++|||+||++|++|++
T Consensus 559 ~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiid~~f~p 638 (919)
T PLN02264 559 QLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIESCFTA 638 (919)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhcccCCCccCCchHHHhcCCCCCCCCCCCcccccccCCCCchhhHHHHHHHHHHHHhhcccccccccc
Q 002706 609 GKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYVNHYYTDPSL 688 (890)
Q Consensus 609 G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~~~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~~ 688 (890)
|+|+|+|++++|++.|+|++++||+||++|||+++|+++||||++.|||||||+|||+||+||++||++||++||++|++
T Consensus 639 g~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~YY~~D~~ 718 (919)
T PLN02264 639 GQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPDPSL 718 (919)
T ss_pred chhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 99999999999997799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCCCcccCCCCCCCC
Q 002706 689 VESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMPTE 768 (890)
Q Consensus 689 V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~ 768 (890)
|++|.|||+||+||++.||+|+++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||+|||++
T Consensus 719 V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~rrp~P~~ 798 (919)
T PLN02264 719 ICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDE 798 (919)
T ss_pred hcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCchhHhhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccCCCCC-CCCCcHHHHHHHHHHHHHHHHHHHH
Q 002706 769 DQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEP-AWGDDPVIKAAFEKFNRKMQELEGI 847 (890)
Q Consensus 769 kkg~~~~~~l~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~-~~~~d~~~~~a~~~F~~~L~~Ie~~ 847 (890)
++++|++|+.+|+++||++||++.||+.+|+++++||+|++||+|||++..+ .|+.|+++++||++|+++|++||++
T Consensus 799 --~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~~~L~eIe~~ 876 (919)
T PLN02264 799 --SDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIGRIEKE 876 (919)
T ss_pred --CChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6689999999999999999999999999999999999999999999998765 8999999999999999999999999
Q ss_pred HhhhcCCccccccCCCccCCceeeccCCCCCCCcCCCCccccC
Q 002706 848 IDDRNSNENLRNRTGAGIVPYELLKPFSGPGATGKGVPYSISI 890 (890)
Q Consensus 848 I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 890 (890)
|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 877 I~~RN~~~~~knR~G~~~~PY~lL~P~s~~G~T~~gIPNSISI 919 (919)
T PLN02264 877 IEKRNADPSRRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHcCCccccccCCCCCCCceeeCCCCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999999999998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=1.3e-258 Score=2238.25 Aligned_cols=822 Identities=45% Similarity=0.826 Sum_probs=779.9
Q ss_pred ccceeEEeeecc-eeeeEEEEecccCCCcc-ccccccc-cEEEEEEecccCC-CCC-Ccc----cccccccccCCCCCCC
Q 002706 56 SIKAIFNLTEKS-TKVKAVITVKPIIPDPL-ALSSLVG-ALGLELVSAELDP-KTG-EEK----PTIKGLALGVLGKDDD 126 (890)
Q Consensus 56 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g-~~~l~lvS~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~ 126 (890)
++||+|++|+++ ++++++.+ ..+ +++|++| +|+|||||++++| +|| +|| ++|++|+++..... +
T Consensus 20 ~~~~~v~l~~k~~ld~~~~~~------~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~-~ 92 (866)
T PLN02337 20 KIKGTVVLMKKNVLDFNDFNA------SVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLT-A 92 (866)
T ss_pred eEEEEEEEEEecccchhhccc------chhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCC-C
Confidence 499999999987 67777554 445 7999999 9999999999998 777 443 99999998755434 6
Q ss_pred CceEEEEEEecCCCCCCeeEEEEEeCCCCceeeeeEEEeecCC-CcEEEeecccccCCCCCCcceEEeeCccccCCCCCh
Q 002706 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPN 205 (890)
Q Consensus 127 ~~~~y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n~~yLp~~tp~ 205 (890)
++++|+|+|+|+++||+||||+|+|.|++||||++|+|+++|+ |+|||+||||||++++|+++||||+||+|||++||+
T Consensus 93 ~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~ 172 (866)
T PLN02337 93 GESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPA 172 (866)
T ss_pred CceEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccH
Confidence 6789999999999999999999999999999999999999994 899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhCCCCCcccccCeEeeccccCCCCCCccc-ccccccCCC-CCCCCCCccCCCCCCCCCCCCCCCccC
Q 002706 206 GLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRPKSFADPASESRSV 283 (890)
Q Consensus 206 ~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~-~~~rpvlgg-~~~pyprR~rtgr~~~~~dp~~e~~~~ 283 (890)
+|++|||+||++|||||+||||+||||||||+|||||+||++ +++|||||| ++|||||||||||+|+++||.+|||..
T Consensus 173 ~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~ 252 (866)
T PLN02337 173 PLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLP 252 (866)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccc
Confidence 999999999999999999999999999999999999999999 999999999 679999999999999999999999943
Q ss_pred ----CCccCCCCccCccccccchhchhHHhhhhhhHHHHHHhccCCCCCCCHHHHHHHhccCCCCCCCCCCchhhhhh--
Q 002706 284 ----SIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI-- 357 (890)
Q Consensus 284 ----~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~-- 357 (890)
.+||||||+|+++|++||+++++||++|.++|.|+++++.+..+|++|+||++||++|+++| ..+.-+.++..
T Consensus 253 ~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp-~~~~~~~~~~~~p 331 (866)
T PLN02337 253 LLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLP-NGPLLEELRKNIP 331 (866)
T ss_pred cCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCC-CchHHHHhhhcCh
Confidence 47999999999999999999999999999999999999888899999999999999999999 32111223332
Q ss_pred hhhhHhhhccCCccccccCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCCCCCCCcHHHHH
Q 002706 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIE 437 (890)
Q Consensus 358 ~~~~~~~~~~~~~~~l~fp~P~~~~~d~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~ 437 (890)
++.+++.++++++.+||||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||++||+
T Consensus 332 ~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~ 411 (866)
T PLN02337 332 LEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIE 411 (866)
T ss_pred HHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHH
Confidence 44577777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCcccHHHHHhCCcEEEeecccccccccccccCCCCceecccceeEeeCCCCceeeEEEEecCCCCCCC--CCCcee
Q 002706 438 QEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGK--PQWKQV 515 (890)
Q Consensus 438 ~~l~g~~Tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~~~~~~~--~~~~~V 515 (890)
+.|+| +||+|||++|||||+||||.+|||+.++|...++ .|||+||||++++|+|+||||||++|+..++ +++++|
T Consensus 412 ~~L~g-~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~V 489 (866)
T PLN02337 412 KNLEG-LTVQEALEKNRLFILDHHDALMPYLRRINSTSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKV 489 (866)
T ss_pred hccCC-ccHHHHHHcCCEEEEecchhcCcccccccCCCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCe
Confidence 99998 9999999999999999999999999999986554 9999999999999999999999998875533 457999
Q ss_pred eeCCCCCCCchHHHHHHHHHhhhcchhhhhhhhhccccchhhHHHHHHhccCCCcCchhhccchhhhhhhhhHHHHHhcc
Q 002706 516 FTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595 (890)
Q Consensus 516 ftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~L 595 (890)
|||+++++++|.|+||||||++||++|||+|+||++||+++|||||||+||||++|||||||.||||+||+||++||+.|
T Consensus 490 fTP~~~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~L 569 (866)
T PLN02337 490 YTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQIL 569 (866)
T ss_pred ECCCCCCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHhe
Confidence 99998777899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccCchhHHHHHHHHHhcccCCCccCCchHHHhcCCCCCCCCCCCcccccccCCCCchhhHHHHHHHHHHH
Q 002706 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWV 675 (890)
Q Consensus 596 I~~gGiie~~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~~~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI~~~V 675 (890)
||+||++|+++++|+|+|+|++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||
T Consensus 570 I~~gGiid~~~~~g~~~~els~~~yk~-w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~~~V 648 (866)
T PLN02337 570 INAGGILESTVFPGKYALEMSSVVYKN-WNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWV 648 (866)
T ss_pred eCCCCeeeeeeccchhHHHHHHHHHhc-CCcccccCHHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccccccccCCHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccC
Q 002706 676 TEYVNHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFP 755 (890)
Q Consensus 676 ~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~P 755 (890)
++||++||++|++|++|.|||+||+||+++||+++++++|||+|+|+++||++||+|||+|||||||||||||+|+||+|
T Consensus 649 ~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvP 728 (866)
T PLN02337 649 KEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLP 728 (866)
T ss_pred HHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCchhHhhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCcHHHHHHHH
Q 002706 756 NRPTMSRTNMPTEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFE 835 (890)
Q Consensus 756 N~P~~~r~p~P~~kkg~~~~~~l~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~~ 835 (890)
|+|++||++||++ |+.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|+.|+++++|++
T Consensus 729 N~P~~~r~~~P~~--~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~~~w~~d~~~~~a~~ 806 (866)
T PLN02337 729 NRPTVSRRFMPEP--GTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAFK 806 (866)
T ss_pred CCchhhcCCCCCC--CchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCCcccccCHHHHHHHH
Confidence 9999999999976 78899999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCccccccCCCccCCceeeccCC-----CCCCCcCCCCccccC
Q 002706 836 KFNRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPFS-----GPGATGKGVPYSISI 890 (890)
Q Consensus 836 ~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss-----~~g~t~~gIPnSIsI 890 (890)
+|+++|++||++|++||++++||||+||+++||+||+|++ +||||||||||||||
T Consensus 807 ~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 807 RFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred HHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 9999999999999999999999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=4.6e-205 Score=1784.51 Aligned_cols=661 Identities=56% Similarity=0.992 Sum_probs=577.0
Q ss_pred ChhhHHHHHHHHHhhhCCCCCcccccCeEeeccccCCCCCCccc-ccccccCCC-CCCCCCCccCCCCCCCCCCCCCCCc
Q 002706 204 PNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRPKSFADPASESR 281 (890)
Q Consensus 204 p~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~-~~~rpvlgg-~~~pyprR~rtgr~~~~~dp~~e~~ 281 (890)
|++|+++|++||++|||||+||||+||||||||||||||+||++ +++|||||| ++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 78999999999999999999999999999999999999999999 999999999 8999999999999999999999999
Q ss_pred cCCCccCCCCccCccccccchhchhHHhhhhhhHHHHHHhccCCCCCCCHHHHHHHhccCCCCCCCCCCchhhhhh--hh
Q 002706 282 SVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI--LP 359 (890)
Q Consensus 282 ~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~--~~ 359 (890)
..++||||||+|++.|+++|.++++||++|.++|.|++++..+..+|+||+||++||++|+++| . +..+.. ++
T Consensus 81 ~~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~-~----~~~~~~~~~~ 155 (667)
T PF00305_consen 81 SGDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLP-T----DLLKKLIPLE 155 (667)
T ss_dssp -SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE---H----HHHCCHTTST
T ss_pred cccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccch-h----hHhhhcCcHH
Confidence 8899999999999999999999999999999999999998878899999999999999999888 2 122222 44
Q ss_pred hhHhhhccCCccccccCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHh
Q 002706 360 ILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQE 439 (890)
Q Consensus 360 ~~~~~~~~~~~~~l~fp~P~~~~~d~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~ 439 (890)
.+.+.+.+++++++|||+|+|++.++++|++|+|||||+|||+||++|+||++||++|+|||++||+++++||++||+..
T Consensus 156 ~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~~~ 235 (667)
T PF00305_consen 156 LLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIEPQ 235 (667)
T ss_dssp TCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHHHH
T ss_pred HHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhhhc
Confidence 57777888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcccHHHHHhCCcEEEeecccccccccccccCCCCceecccceeEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCC
Q 002706 440 IGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPS 519 (890)
Q Consensus 440 l~g~~Tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VftP~ 519 (890)
|+| +||++||++|||||+|||++++|+++++|. .+++.|||+||||++++|+|+||||||++|+..+.+++++||||+
T Consensus 236 l~g-~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~tP~ 313 (667)
T PF00305_consen 236 LEG-LTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFTPS 313 (667)
T ss_dssp CHC-S-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-TT
T ss_pred cCC-CcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeeecC
Confidence 999 999999999999999999999999999998 789999999999999999999999999888765545678999999
Q ss_pred CCCCCchHHHHHHHHHhhhcchhhhhhhhhccccchhhHHHHHHhccCCCcCchhhccchhhhhhhhhHHHHHhcccCCC
Q 002706 520 RHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAG 599 (890)
Q Consensus 520 d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~g 599 (890)
++++.+|.|+||||||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||++|
T Consensus 314 ~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~g 393 (667)
T PF00305_consen 314 DDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLINAG 393 (667)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSSTT
T ss_pred CCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhccC
Confidence 65567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCchhHHHHHHHHHhcccCCCccCCchHHHhcCCCCCCCCCCCcccccccCCCCchhhHHHHHHHHHHHHhhc
Q 002706 600 GLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISRGMAVEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEYV 679 (890)
Q Consensus 600 Giie~~f~~G~~~~elss~~Y~~~w~F~~~~lP~DL~~RG~~~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI~~~V~~yv 679 (890)
|+||++|++|+++|+|++++|++ |+|++++||+||++|||+++|++++||+++.|||||||+|||+||+||++||++||
T Consensus 394 G~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~~v 472 (667)
T PF00305_consen 394 GIIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSDYV 472 (667)
T ss_dssp SHHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhccccccccccccccceeccccCCCcc
Q 002706 680 NHYYTDPSLVESDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPT 759 (890)
Q Consensus 680 ~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~ 759 (890)
++||++|++|++|.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+|+
T Consensus 473 ~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~P~ 552 (667)
T PF00305_consen 473 NLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNRPT 552 (667)
T ss_dssp HHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS-S
T ss_pred hhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCCCh
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCchh--HhhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCcHHHHHHHHHH
Q 002706 760 MSRTNMPTEDQSEAD--WKSFLANPEDTLLQCFPSKMQAMQDMVILDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAFEKF 837 (890)
Q Consensus 760 ~~r~p~P~~kkg~~~--~~~l~~~~e~~~L~tlP~~~qa~~~m~~~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~~~F 837 (890)
+||+++|.+ ++.+ |++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++++|+++|
T Consensus 553 ~~r~~~P~~--~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~~F 630 (667)
T PF00305_consen 553 ALRRPMPPP--TTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFERF 630 (667)
T ss_dssp -BSSSS--T--SSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHHHH
T ss_pred hhcccCCCC--CcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHHHH
Confidence 999998887 4555 999999999999999999999999999999999999999999999988999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCccccccCCCccCCceeeccC
Q 002706 838 NRKMQELEGIIDDRNSNENLRNRTGAGIVPYELLKPF 874 (890)
Q Consensus 838 ~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps 874 (890)
+++|++||++|++||+++++|||+|||++||+||+||
T Consensus 631 ~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 631 QEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 9999999999999999999999999999999999996
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=2.7e-34 Score=279.14 Aligned_cols=128 Identities=41% Similarity=0.726 Sum_probs=113.3
Q ss_pred ccceeEEeeecc-eeeeEEEEecccCCCcc-ccccccc-cEEEEEEecccCCCCCCcc----cccccccccCCCCCCCCc
Q 002706 56 SIKAIFNLTEKS-TKVKAVITVKPIIPDPL-ALSSLVG-ALGLELVSAELDPKTGEEK----PTIKGLALGVLGKDDDGN 128 (890)
Q Consensus 56 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g-~~~l~lvS~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 128 (890)
.+||+|++|+++ ++++... ..+ ++.|++| +|+|||||+++||+||+|| ++|++|.++. +++
T Consensus 2 ~vka~V~v~~k~~~~~~~~~-------~~~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~-----~~e 69 (137)
T cd01751 2 KVKATVTVMKKNKLDLNDDG-------SGLDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL-----AGE 69 (137)
T ss_pred EEEEEEEEEEeecccccccc-------chhhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC-----Ccc
Confidence 378899998886 6666543 224 7899999 9999999999999999655 9999998654 236
Q ss_pred eEEEEEEecCCCCCCeeEEEEEeCCCCceeeeeEEEeecCC-CcEEEeecccccCCCCCCcceEEeeC
Q 002706 129 IKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIVDKQKRIFFTN 195 (890)
Q Consensus 129 ~~y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n 195 (890)
++|+++|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+|
T Consensus 70 ~~y~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 70 SAYEAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred eEEEEEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 69999999999999999999999999999999999999995 89999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.11 E-value=3.7e-10 Score=104.88 Aligned_cols=82 Identities=27% Similarity=0.540 Sum_probs=62.8
Q ss_pred cEEEEEEecccCCCCCCc-ccccccccccCCCCCCCCceEEEEEEecCCCCCCeeEEEEEeCC-CCceeeeeEEEeecCC
Q 002706 92 ALGLELVSAELDPKTGEE-KPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQ-LTEMYLQDIVLDGLPN 169 (890)
Q Consensus 92 ~~~l~lvS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~-~~e~fl~~i~l~~~p~ 169 (890)
+|.|+|++++.+ +|.. ...++.|. . .....|+..|+++.++|++++|.|++++ ..+|||+.|+|++.+.
T Consensus 20 ~V~l~L~g~~~~--s~~~~~~~~~~~~-----f--~~g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~ 90 (105)
T smart00308 20 SVSLSLVGAEGD--GKESKLDYLFKGI-----F--ARGSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPT 90 (105)
T ss_pred eEEEEEEeCCCC--CcceeccccCCcc-----c--cCCceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCC
Confidence 799999998865 3321 13444442 1 1123566677789999999999999999 7999999999987665
Q ss_pred C-cEEEeecccccC
Q 002706 170 G-PVNLTCDSWIQP 182 (890)
Q Consensus 170 g-~~~F~c~sWv~~ 182 (890)
| .++|+||+||++
T Consensus 91 ~~~~~F~c~~Wl~~ 104 (105)
T smart00308 91 GGKYHFPCNSWVYP 104 (105)
T ss_pred CCEEEEEcCceeCC
Confidence 5 899999999986
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.72 E-value=3.8e-08 Score=91.70 Aligned_cols=63 Identities=25% Similarity=0.584 Sum_probs=55.5
Q ss_pred eEEEEEEecCCCCCCeeEEEEEeC---CCCceeeeeEEEeecCCC-cEEEeecccccCCCCCCcceEEe
Q 002706 129 IKYKAELKIPASFGDVGAILVESD---QLTEMYLQDIVLDGLPNG-PVNLTCDSWIQPKIVDKQKRIFF 193 (890)
Q Consensus 129 ~~y~v~f~~~~~fG~pgai~v~n~---~~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~~~~~riff 193 (890)
++|.++ .+.++|++.+|.|.++ ....|||++|+|...+.| .+.|+||+||....+++.+|+||
T Consensus 47 d~F~i~--~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 47 DTFTIE--TPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEE--ESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred EEeeee--ecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 456555 5789999999999998 678999999999876666 89999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.46 E-value=5.7e-07 Score=84.90 Aligned_cols=64 Identities=13% Similarity=0.248 Sum_probs=53.8
Q ss_pred ceEEEEEEecCCCCCCeeEEEEEeCCCC---ceeeeeEEEeecCCC-cEEEeecccccCCCCCCcceEEe
Q 002706 128 NIKYKAELKIPASFGDVGAILVESDQLT---EMYLQDIVLDGLPNG-PVNLTCDSWIQPKIVDKQKRIFF 193 (890)
Q Consensus 128 ~~~y~v~f~~~~~fG~pgai~v~n~~~~---e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~~~~~riff 193 (890)
..+|.| +.+.++|++.+|.|++++.. +|||++|+|.+...| .++|+||+||.....++.+|+|.
T Consensus 49 ~~~f~v--~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 49 TDTFQI--DLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred ceEEEE--eccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 345554 46789999999999998875 999999999876665 89999999999988888888863
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.20 E-value=6.1e-06 Score=78.45 Aligned_cols=77 Identities=16% Similarity=0.319 Sum_probs=56.4
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceEEEEEEecCCCCCCeeEEEEEeCCC-CceeeeeEEEeecCCC
Q 002706 92 ALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQL-TEMYLQDIVLDGLPNG 170 (890)
Q Consensus 92 ~~~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~-~e~fl~~i~l~~~p~g 170 (890)
+|.|+||.++- .++ +..|.+ .... ...++|.|+ ++++|++-.|.|.|... +.|||+.|+|++ |.|
T Consensus 20 ~V~i~L~G~~g--~S~--~~~L~~----~F~~--G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g 85 (109)
T cd02899 20 TIEITLLGSSG--RSN--PKTLSQ----GFYP--GSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKS-EDG 85 (109)
T ss_pred eEEEEEEECCC--CcC--CEEccC----ccCC--CceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEEC-CCC
Confidence 69999997653 222 222332 1111 335678766 79999999999988774 789999999986 866
Q ss_pred -cEEEeecccccC
Q 002706 171 -PVNLTCDSWIQP 182 (890)
Q Consensus 171 -~~~F~c~sWv~~ 182 (890)
.++||||+|+..
T Consensus 86 ~~~~Fpc~rWla~ 98 (109)
T cd02899 86 KVFAFNVKRWIGY 98 (109)
T ss_pred CEEEEEcceeeCC
Confidence 888999999975
No 10
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.82 E-value=0.00013 Score=69.64 Aligned_cols=83 Identities=18% Similarity=0.390 Sum_probs=57.8
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceEEEEEEecCCCCCCeeEEEEEeCC---CCceeeeeEEEeecC
Q 002706 92 ALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQ---LTEMYLQDIVLDGLP 168 (890)
Q Consensus 92 ~~~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~l~~~p 168 (890)
+|.|+|+.++-+ ++ .-.|...... ... ...+.|.++ .+.++|++-.|.|+.++ ...|||+.|+|++ +
T Consensus 20 ~V~i~l~G~~g~--S~--~~~L~~~~~~-Fer--G~~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~-~ 89 (113)
T cd01753 20 YIYLTLVGTAGE--SE--KQLLDRPGYD-FER--GAVDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYITVTG-P 89 (113)
T ss_pred EEEEEEEECCCc--cc--CEEcCCCCCc-cCC--CCeeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEEEEEc-C
Confidence 688999866542 22 2223322111 111 234577766 57899999999999877 4799999999986 4
Q ss_pred CC-cEEEeecccccCCC
Q 002706 169 NG-PVNLTCDSWIQPKI 184 (890)
Q Consensus 169 ~g-~~~F~c~sWv~~~~ 184 (890)
.| .++||||+|+....
T Consensus 90 ~~~~~~F~c~rWl~~~~ 106 (113)
T cd01753 90 GGDEYHFPCYRWIEGYG 106 (113)
T ss_pred CCCEEEEEhHHeECCCC
Confidence 36 79999999998754
No 11
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.81 E-value=0.00022 Score=68.55 Aligned_cols=93 Identities=16% Similarity=0.303 Sum_probs=62.1
Q ss_pred cEEEEEEecccCCCCCCcccccccc-cccCCCCCCCCceEEEEEEecCCCCCCeeEEEEEeCCC---CceeeeeEEEeec
Q 002706 92 ALGLELVSAELDPKTGEEKPTIKGL-ALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQL---TEMYLQDIVLDGL 167 (890)
Q Consensus 92 ~~~l~lvS~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~---~e~fl~~i~l~~~ 167 (890)
.|.|+|+-+.- .+ ++-.|..+ ....... ...++|.++. .++|++-.|.|+.+.. ..|||+.|+|.+.
T Consensus 20 ~V~i~L~G~~g--~s--~~~~L~~~~~~~~Fer--Gs~d~F~i~~---~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~ 90 (120)
T cd01756 20 NVFITLYGENG--DT--GKRKLKKSNNKNKFER--GQTDKFTVEA---VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREP 90 (120)
T ss_pred EEEEEEEeCCC--cc--ccEEccCCCcCCcccC--CCeEEEEEEe---cCCCCeEEEEEEECCCCCCCCcEEeEEEEEEC
Confidence 68888886432 12 23445543 1111111 2356787774 7999999999998774 6899999999875
Q ss_pred CCC-cEEEeecccccCCCCC-CcceEEe
Q 002706 168 PNG-PVNLTCDSWIQPKIVD-KQKRIFF 193 (890)
Q Consensus 168 p~g-~~~F~c~sWv~~~~~~-~~~riff 193 (890)
..| .++||||+|+...+.. .-.|++.
T Consensus 91 ~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 91 GTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred CCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 556 7999999999876532 2245554
No 12
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.60 E-value=0.00021 Score=68.58 Aligned_cols=48 Identities=10% Similarity=0.367 Sum_probs=41.8
Q ss_pred CCCCCCeeEEEEEeCCC---CceeeeeEEEeecCCC-cEEEeecccccCCCC
Q 002706 138 PASFGDVGAILVESDQL---TEMYLQDIVLDGLPNG-PVNLTCDSWIQPKIV 185 (890)
Q Consensus 138 ~~~fG~pgai~v~n~~~---~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~ 185 (890)
+.++|+.-.|.|..++. ..|||+.|.|++.+.| .++||||+|+...+.
T Consensus 49 ~~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 49 CQNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred cCCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 49999999999998773 7999999999987766 799999999987653
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.58 E-value=0.00051 Score=66.06 Aligned_cols=86 Identities=15% Similarity=0.319 Sum_probs=57.1
Q ss_pred cEEEEEEecccCCCCCCcccccccccccCCCCCCCCceEEEEEEecCCCCCCeeEEEEEeCC---CCceeeeeEEEeecC
Q 002706 92 ALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQ---LTEMYLQDIVLDGLP 168 (890)
Q Consensus 92 ~~~l~lvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~l~~~p 168 (890)
+|.|+|+.+.-+ ++ +-.|.+........ ....+|.+. .+.++|++-.|.|..+. ...|||+.|+|.+..
T Consensus 20 ~V~i~L~G~~g~--s~--~~~L~~~~~~~F~r--G~~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~ 91 (120)
T cd01752 20 KVTITLYGAEGE--SE--PHHLRDPEKPIFER--GSVDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQ 91 (120)
T ss_pred EEEEEEEeCCCC--cc--cEEcCCCCccceeC--CCeeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEEEEEEECC
Confidence 688898866542 21 22333221111111 223455555 57899999999998766 379999999998744
Q ss_pred CC-cEEEeecccccCCCC
Q 002706 169 NG-PVNLTCDSWIQPKIV 185 (890)
Q Consensus 169 ~g-~~~F~c~sWv~~~~~ 185 (890)
.| .++||||+|+...+.
T Consensus 92 t~~~~~F~~~rWl~~~~~ 109 (120)
T cd01752 92 TGKKWFFLCNDWLSVEEG 109 (120)
T ss_pred CCcEEEEEeCcEECCcCC
Confidence 45 789999999987643
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.33 E-value=0.00074 Score=66.21 Aligned_cols=57 Identities=9% Similarity=0.092 Sum_probs=46.2
Q ss_pred CceEEEEEEecCCCCCCeeEEEEEeCC---CCceeeeeEEEeecCC---C-cEEEeecccccCCCC
Q 002706 127 GNIKYKAELKIPASFGDVGAILVESDQ---LTEMYLQDIVLDGLPN---G-PVNLTCDSWIQPKIV 185 (890)
Q Consensus 127 ~~~~y~v~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~l~~~p~---g-~~~F~c~sWv~~~~~ 185 (890)
..+.|.|+ .+.++|++-.|.|+.+. ...|||..|+|.+... + .++||||+|+...+.
T Consensus 56 ~~d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 56 NLDRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred CccEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 35688877 57889999999999876 4789999999987543 2 799999999977653
No 15
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=38.04 E-value=1.5e+02 Score=28.66 Aligned_cols=50 Identities=10% Similarity=0.107 Sum_probs=38.6
Q ss_pred eEEEEEEecCCCCCCeeEEEEEeCCC----------CceeeeeEEEeecCCCcEEEeecc
Q 002706 129 IKYKAELKIPASFGDVGAILVESDQL----------TEMYLQDIVLDGLPNGPVNLTCDS 178 (890)
Q Consensus 129 ~~y~v~f~~~~~fG~pgai~v~n~~~----------~e~fl~~i~l~~~p~g~~~F~c~s 178 (890)
..|..-+..+.++|..-.|.++-+.. ..||++.|+|++..++.-..-|.+
T Consensus 46 ~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 46 KTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 35666666799999999999975443 489999999988777766667876
No 16
>TIGR03124 ctirate_citX holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.
Probab=37.60 E-value=15 Score=37.91 Aligned_cols=54 Identities=28% Similarity=0.443 Sum_probs=33.4
Q ss_pred cccCCCCChhhHHHHHHHHHhhhCCCCCcccccCeEeeccccCCCCCCcccccccccCCCCCCCCCCccC
Q 002706 197 SYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCR 266 (890)
Q Consensus 197 ~yLp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~~~~rpvlgg~~~pyprR~r 266 (890)
+|+--+.++.-.|..-=+|++.-- -=|++|.|||+.-|.+ +-|--|| +| ||||=
T Consensus 81 ~~~~v~~~a~~vK~~~i~iEe~hp--------lGRL~DlDV~~~~g~~----iSR~~lg---~~-~R~Cl 134 (165)
T TIGR03124 81 AFLVVDAPALELKRLMIKLEESHP--------LGRLWDIDVLDADGKS----LSRTDLG---LP-PRKCL 134 (165)
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCc--------hhhheeheeecCCCCC----cCHHHcC---CC-CCeee
Confidence 344444455445666666665542 2289999999755544 5576677 44 89885
No 17
>PF07157 DNA_circ_N: DNA circularisation protein N-terminus; InterPro: IPR009826 This entry represents the N terminus (approximately 100 residues) of a number of phage DNA circulation proteins.
Probab=37.18 E-value=12 Score=35.10 Aligned_cols=70 Identities=21% Similarity=0.618 Sum_probs=46.1
Q ss_pred cCCC--CCCCCCCCcccccccCCCCchhhHHHHHHHHHHHHhh--------ccccccccccccCCHHHHHHHHHHhhccc
Q 002706 638 RGMA--VEDPNAPHGLKLTIEDYPFANDGLDLWDALKQWVTEY--------VNHYYTDPSLVESDEELQAWWTEIRTVGH 707 (890)
Q Consensus 638 RG~~--~~D~~~~hgl~l~i~dYpYrdDGL~IW~AI~~~V~~y--------v~~YY~sD~~V~~D~ELQaW~~Ei~~~G~ 707 (890)
||+. +.+.+...|=++....|||||.+ ||+|. ++.|.-.|+ -+..++++++-+.+.|-
T Consensus 11 RGVpF~v~~~~~~~gRr~~~heyP~rd~~---------~vEDlG~~~r~~~~~a~~~G~d---y~~~~~~L~~al~~~G~ 78 (93)
T PF07157_consen 11 RGVPFDVESTDDSGGRRLAVHEYPYRDGP---------WVEDLGRKARRIRVTAFFVGDD---YEAQRDALIAALEAPGP 78 (93)
T ss_pred CCeeEEEEEcccCCCcEEEEEecCCCCCc---------CeeecCCCCcEEEEEEEEECCc---HHHHHHHHHHHHcCCCC
Confidence 5554 44445566778889999999987 66664 223332221 12567788888888888
Q ss_pred CCCCCCCCCCCCC
Q 002706 708 ADKKDEPWWPVLK 720 (890)
Q Consensus 708 ~d~kd~p~~P~l~ 720 (890)
|.+-. |||..++
T Consensus 79 G~LvH-P~~G~~~ 90 (93)
T PF07157_consen 79 GELVH-PWFGSMQ 90 (93)
T ss_pred eEEec-CCCceEE
Confidence 87765 7776543
No 18
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=24.70 E-value=1.1e+02 Score=23.75 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHh
Q 002706 691 SDEELQAWWTEIRTVGHADKKDEPWWPVLKTPQDLIEIVT 730 (890)
Q Consensus 691 ~D~ELQaW~~Ei~~~G~~d~kd~p~~P~l~T~~~Lv~~lT 730 (890)
+|.+|+.|..+ ||-... +...|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~~----~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPVP----KSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCCC----CCCCCHHHHHHHHH
Confidence 46899999987 332222 12269999998763
No 19
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=24.22 E-value=44 Score=36.25 Aligned_cols=24 Identities=33% Similarity=0.895 Sum_probs=20.4
Q ss_pred HHHHHhhccccccccccccCCHHHHHHHHH
Q 002706 672 KQWVTEYVNHYYTDPSLVESDEELQAWWTE 701 (890)
Q Consensus 672 ~~~V~~yv~~YY~sD~~V~~D~ELQaW~~E 701 (890)
.+||..||+.|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 579999999999 345799999986
No 20
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=22.77 E-value=41 Score=42.35 Aligned_cols=46 Identities=13% Similarity=0.379 Sum_probs=35.0
Q ss_pred CCCCCeeEEEEEeCC---CCceeeeeEEEeecCCC-cEEEeecccccCCC
Q 002706 139 ASFGDVGAILVESDQ---LTEMYLQDIVLDGLPNG-PVNLTCDSWIQPKI 184 (890)
Q Consensus 139 ~~fG~pgai~v~n~~---~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~ 184 (890)
.++|..--+.|-... ...||++.|.|..--.| ++-|||++|.-+..
T Consensus 1020 kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ge 1069 (1295)
T KOG2080|consen 1020 KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGE 1069 (1295)
T ss_pred cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCcc
Confidence 789999888886544 36899999877431246 89999999987654
No 21
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=21.38 E-value=1.4e+02 Score=30.13 Aligned_cols=126 Identities=17% Similarity=0.192 Sum_probs=70.0
Q ss_pred cccCCHHHHHHHHHHhhcccCCCCCCCCCC-CCCChhHHHHHHhhhhccccccccccccccceeccccCCCcccCCCCCC
Q 002706 688 LVESDEELQAWWTEIRTVGHADKKDEPWWP-VLKTPQDLIEIVTTIAWVASGQHAAVNFGQYLYGGYFPNRPTMSRTNMP 766 (890)
Q Consensus 688 ~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P-~l~T~~~Lv~~lT~iIw~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P 766 (890)
-|.+|++|..+.+++.++ ....++-.|.| .+++.++|..++-.||-+|=.... .-.+-..-|+.=|. .+--||-
T Consensus 11 lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~AP~~~~--~~~~~glvG~P~na--iLdwpM~ 85 (141)
T PF12588_consen 11 LIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTAPEFSD--ANEPVGLVGFPMNA--ILDWPMG 85 (141)
T ss_pred HHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhCCcccc--cCCCCCccccChHH--HHHhhcc
Confidence 468999999999999987 32233434677 899999999999999955432222 00112233333332 2233444
Q ss_pred CCCCCchhHhhhhcCcHHHHHhcCCChHHHHHHHHH--HHhhcCCCCCCccccCCCCCCCCCcHHHHHHH
Q 002706 767 TEDQSEADWKSFLANPEDTLLQCFPSKMQAMQDMVI--LDTLSTHSPDEEYLGKEMEPAWGDDPVIKAAF 834 (890)
Q Consensus 767 ~~kkg~~~~~~l~~~~e~~~L~tlP~~~qa~~~m~~--~~~LS~h~~de~yLG~~~~~~~~~d~~~~~a~ 834 (890)
|. ..|.-|+. |...+.+..|.- ...|++..+- ..|...+...|++. .+++.+
T Consensus 86 T~----sG~a~F~~----------p~vN~~lK~ILn~W~~fL~sp~S~-~vL~~~~~~GWfs~-~A~~~l 139 (141)
T PF12588_consen 86 TP----SGYAFFLD----------PDVNAQLKKILNEWGEFLSSPASR-SVLNTDPPNGWFSP-EALKEL 139 (141)
T ss_pred Ch----HHHHHHcC----------HHHHHHHHHHHHHHHHHcCChhhh-ccccCCCCCCccCH-HHHHHh
Confidence 43 23443321 233344444432 2456654443 34665533479984 444443
Done!