Your job contains 1 sequence.
>002707
MRHFDVQIIGGAVLHDGSIAEMKTVVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIP
EERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGR
NPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDL
WDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEA
KEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNI
RVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVL
NARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR
EALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSES
VEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVI
GTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDED
MPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCS
QQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKS
IEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNL
LRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR
SFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELFLS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002707
(890 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CHY_0162 - symbol:CHY_0162 "preprotein transloca... 986 4.7e-155 4
UNIPROTKB|P0A5Y8 - symbol:secA1 "Protein translocase subu... 953 2.8e-147 4
TIGR_CMR|GSU_2050 - symbol:GSU_2050 "preprotein transloca... 843 1.0e-137 4
TIGR_CMR|DET_0434 - symbol:DET_0434 "preprotein transloca... 790 2.3e-137 5
TIGR_CMR|BA_5421 - symbol:BA_5421 "preprotein translocase... 908 1.5e-136 4
UNIPROTKB|Q7WWK0 - symbol:secA "Protein translocase subun... 863 1.3e-129 4
TIGR_CMR|APH_1178 - symbol:APH_1178 "preprotein transloca... 861 3.3e-129 4
TIGR_CMR|CJE_1020 - symbol:CJE_1020 "preprotein transloca... 792 1.4e-128 4
TIGR_CMR|SPO_0057 - symbol:SPO_0057 "preprotein transloca... 834 6.0e-128 4
NCBI_NP|NP_357091.2 - symbol:secA "preprotein translocase... 807 2.0e-125 4
TIGR_CMR|NSE_0232 - symbol:NSE_0232 "preprotein transloca... 827 5.2e-125 4
TIGR_CMR|CBU_0147 - symbol:CBU_0147 "preprotein transloca... 539 2.6e-121 5
TIGR_CMR|BA_0882 - symbol:BA_0882 "preprotein translocase... 833 2.2e-120 4
UNIPROTKB|P10408 - symbol:secA species:83333 "Escherichia... 742 9.1e-118 4
TIGR_CMR|SO_4211 - symbol:SO_4211 "preprotein translocase... 709 5.5e-116 4
TIGR_CMR|CPS_4454 - symbol:CPS_4454 "preprotein transloca... 711 1.9e-115 4
TIGR_CMR|ECH_1149 - symbol:ECH_1149 "preprotein transloca... 832 2.7e-109 2
UNIPROTKB|Q3S2Y3 - symbol:secA2 "Protein translocase subu... 695 2.6e-99 4
UNIPROTKB|Q7WUF6 - symbol:secA2 "Protein translocase subu... 653 7.1e-94 4
UNIPROTKB|Q9KPH4 - symbol:secA "Protein translocase subun... 559 4.9e-93 4
TIGR_CMR|VC_2394 - symbol:VC_2394 "preprotein translocase... 559 4.9e-93 4
UNIPROTKB|P66785 - symbol:secA2 "Protein translocase subu... 670 1.0e-92 4
UNIPROTKB|Q5LPY3 - symbol:secA2 "Protein translocase subu... 664 2.0e-87 3
TIGR_CMR|SPO_2713 - symbol:SPO_2713 "SecA DEAD domain pro... 664 2.0e-87 3
DICTYBASE|DDB_G0291406 - symbol:DDB_G0291406 species:4468... 237 3.2e-22 3
>TIGR_CMR|CHY_0162 [details] [associations]
symbol:CHY_0162 "preprotein translocase, SecA subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0009306 "protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017038
HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_359034.1 ProteinModelPortal:Q3AFQ0
SMR:Q3AFQ0 STRING:Q3AFQ0 GeneID:3727591 KEGG:chy:CHY_0162
PATRIC:21273509 BioCyc:CHYD246194:GJCN-162-MONOMER Uniprot:Q3AFQ0
Length = 874
Score = 986 (352.1 bits), Expect = 4.7e-155, Sum P(4) = 4.7e-155
Identities = 197/383 (51%), Positives = 276/383 (72%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
+VTVNDYLA+RDAEWM ++++FLGLSVGL+ GM E+++ Y DITY N+E GFDYL
Sbjct: 126 IVTVNDYLARRDAEWMGKIYKFLGLSVGLVVHGMDYAEKKAAYLADITYGTNNEFGFDYL 185
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+A + +Q+V R ++AI+DEVDS+LIDE R PL+ISGEA K Y AK+ +
Sbjct: 186 RDNMAIHPDQVVQR---ELYYAIIDEVDSILIDEARTPLIISGEAEKSTDLYYTFAKIVK 242
Query: 145 LLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRR 203
LV G YTV+ K ++V TE GI E L +L+ DE+ + ALKA+ +R
Sbjct: 243 QLVPGEDYTVDEKAHAVMPTEAGIHKVEKMLGIQNLYADEHMELTHHLNAALKAQALMKR 302
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKEG+KI+ ++ +A IT+Q+ F+
Sbjct: 303 DRDYVVKDGQVIIVDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEQETQTLATITFQNYFR 362
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
+Y KL+GMTGTA+TEE EF K++ + V+ +PT+ P IR DLP F T + K++ +EV
Sbjct: 363 MYEKLAGMTGTAETEENEFRKIYNLSVVVIPTHKPMIRKDLPDVIFKTEKAKFKAIVEEV 422
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ G+P+L+G+ S+E SE LS++LK++GIPH VLNA KY +EAE VAQAGR A+
Sbjct: 423 ARRHQTGQPILIGTISIEKSEMLSEMLKKRGIPHQVLNA--KYHEKEAEIVAQAGRLGAV 480
Query: 384 TISTNMAGRGTDIILGGNPKMLA 406
TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 481 TIATNMAGRGTDILLGGNPEFLA 503
Score = 336 (123.3 bits), Expect = 4.7e-155, Sum P(4) = 4.7e-155
Identities = 76/183 (41%), Positives = 104/183 (56%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L + E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S
Sbjct: 521 YRELLAKYKKITDEEHKKVVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFIS 580
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D L+ R+ DED PIE I R + Q E F IRK ++E
Sbjct: 581 LEDDLMRLFGSDN--IAGLMDRLGLDEDTPIEHPLITRSIETAQKRVENRNFEIRKHVLE 638
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D V+ QR+ +Y R+ +L G E + Q ++AVV+ + HP W L
Sbjct: 639 YDNVMNQQRELIYSQRRRVLFG--EDVLTFVHQMIEAVVERAVDTYCPDGVHPEEWDLKG 696
Query: 693 LLK 695
LL+
Sbjct: 697 LLE 699
Score = 133 (51.9 bits), Expect = 4.7e-155, Sum P(4) = 4.7e-155
Identities = 24/70 (34%), Positives = 46/70 (65%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER V+++ +D W DHL M++L + +R++G ++PL EYKI+ F +M++A
Sbjct: 748 LRELERYVILRVVDEKWMDHLDAMDQLREGIGLRAYGQKDPLVEYKIESVEMFNNMIAAI 807
Query: 867 RRLTVESLVQ 876
+ V L++
Sbjct: 808 QEDVVRYLMR 817
Score = 105 (42.0 bits), Expect = 4.7e-155, Sum P(4) = 4.7e-155
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ++GG VLH+G IAEMKT
Sbjct: 79 MRHFDVQLMGGIVLHEGKIAEMKT 102
>UNIPROTKB|P0A5Y8 [details] [associations]
symbol:secA1 "Protein translocase subunit SecA 1"
species:1773 "Mycobacterium tuberculosis" [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0031522 "cell envelope Sec
protein transport complex" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0043952 "protein transport by the Sec complex"
evidence=IDA] [GO:0051701 "interaction with host" evidence=TAS]
[GO:0052059 "evasion or tolerance by symbiont of host-produced
reactive oxygen species" evidence=TAS] [GO:0052572 "response to
host immune response" evidence=TAS] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0040007 GO:GO:0005618 GO:GO:0006605 Reactome:REACT_116125
GO:GO:0005576 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0016887 EMBL:BX842582 GO:GO:0052059
TCDB:3.A.5.2.2 GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR014018 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 PIR:B70592 RefSeq:NP_337866.1
RefSeq:YP_006516716.1 RefSeq:YP_177950.1 PDB:1NKT PDB:1NL3
PDBsum:1NKT PDBsum:1NL3 ProteinModelPortal:P0A5Y8 SMR:P0A5Y8
PRIDE:P0A5Y8 EnsemblBacteria:EBMYCT00000000278
EnsemblBacteria:EBMYCT00000071189 GeneID:13318062 GeneID:888860
GeneID:922590 KEGG:mtc:MT3338 KEGG:mtu:Rv3240c KEGG:mtv:RVBD_3240c
PATRIC:18129094 TubercuList:Rv3240c HOGENOM:HOG000218168
EvolutionaryTrace:P0A5Y8 GO:GO:0031522 GO:GO:0043952 Uniprot:P0A5Y8
Length = 949
Score = 953 (340.5 bits), Expect = 2.8e-147, Sum P(4) = 2.8e-147
Identities = 194/390 (49%), Positives = 269/390 (68%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
+VTVNDYLA+RD+EWM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYL
Sbjct: 127 IVTVNDYLAKRDSEWMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYL 186
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+A + + LV R H+AIVDEVDS+LIDE R PL+ISG A Y A++A
Sbjct: 187 RDNMAHSLDDLVQRG---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAP 243
Query: 145 LLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRR 203
L+ + +HY V+L+ +V + E+G+ E L ++L++ N P ++ NALKAKE + R
Sbjct: 244 LMEKDVHYEVDLRKRTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSR 303
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D YIVR+G+ LI++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+
Sbjct: 304 DKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFR 363
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KL+GMTGTA+TE E +++++ V+ +PTN+P IR D + T K+ +V
Sbjct: 364 LYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDV 423
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ G+PVL+G+TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +
Sbjct: 424 AERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGV 481
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDR 413
T++TNMAGRGTDI+LGGN L + + +R
Sbjct: 482 TVATNMAGRGTDIVLGGNVDFLTDQRLRER 511
Score = 316 (116.3 bits), Expect = 2.8e-147, Sum P(4) = 2.8e-147
Identities = 79/211 (37%), Positives = 122/211 (57%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L ++K+ S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 530 LPIVKE---EASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 586
Query: 574 QDEMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
DE+ ++F+ A++ L++R+ +D+PIE + R + Q E+ F +RK++++
Sbjct: 587 GDELMRRFN---GAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLK 643
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+DEV+ QRK +Y R+ IL G E+ Q ++ V+ + G + W LD
Sbjct: 644 YDEVMNQQRKVIYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDA 700
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
L + A+ K L + GI+ D+L + E
Sbjct: 701 L---WTAL--KTLYPV--GITADSLTRKDHE 724
Score = 137 (53.3 bits), Expect = 2.8e-147, Sum P(4) = 2.8e-147
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILI--ASYLNVVQESRYDDVY----MKEVERAV 814
+ I +D LT+ +L R+ L + L+ A +E+ +++ M+++ER V
Sbjct: 711 VGITADSLTRKDHEFERDDLTREELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNV 770
Query: 815 LVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
L+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 771 LLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
Score = 80 (33.2 bits), Expect = 2.8e-147, Sum P(4) = 2.8e-147
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT 24
R FDVQ++G A LH G++AEMKT
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKT 103
Score = 54 (24.1 bits), Expect = 3.2e-38, Sum P(4) = 3.2e-38
Identities = 60/254 (23%), Positives = 103/254 (40%)
Query: 148 QGLHYTVELKNNSVELTEEGIALAEMALETN-DLWDENDPWARFVMN-ALKAKEFYRRDV 205
+G+H +E K + VE+ E LA + L+ L+D+ A + E Y+ V
Sbjct: 332 EGMHQAIEAKEH-VEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGV 390
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
I N + R ++ S+ I++ EAK + V + K
Sbjct: 391 VSIPTNMPMI-------REDQ----SDLIYKTEEAKY--------IAVVDDVAERYAKGQ 431
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRV---DLPIQSFATARGKWEYARQE 322
P L GT E E+L Q +P N+ N + + I + A RG A
Sbjct: 432 PVL---IGTTSVERSEYLSR-QFTKRRIPHNVLNAKYHEQEATIIAVAGRRGGVTVAT-- 485
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDL-LKQQGI-P-----------HNVLNARPKYAAR 369
+M G +++G N ++L+D L+++G+ P H+ L + A++
Sbjct: 486 --NMAGRGTDIVLGG----NVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASK 539
Query: 370 EAETVAQAGRKYAI 383
EA+ V +AG Y +
Sbjct: 540 EAKEVIEAGGLYVL 553
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 281 EFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM-FRLGRPVL 334
E ++ F +E N+ D+PI++ R + A+ +VE F + + VL
Sbjct: 589 ELMRRFNGAALETLLTRLNLPDDVPIEAKMVTRAI-KSAQTQVEQQNFEVRKNVL 642
>TIGR_CMR|GSU_2050 [details] [associations]
symbol:GSU_2050 "preprotein translocase, SecA subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168 HSSP:P43803
RefSeq:NP_953099.1 ProteinModelPortal:Q74BJ1 SMR:Q74BJ1
GeneID:2686041 KEGG:gsu:GSU2050 PATRIC:22026961
BioCyc:GSUL243231:GH27-1960-MONOMER Uniprot:Q74BJ1
Length = 897
Score = 843 (301.8 bits), Expect = 1.0e-137, Sum P(4) = 1.0e-137
Identities = 187/404 (46%), Positives = 260/404 (64%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVNDYLA+RD+EWM R++RFLGL+VG+I G+ +ERR+ Y DITY N+E GFDYL
Sbjct: 128 VVTVNDYLARRDSEWMGRLYRFLGLTVGVIVHGIDDDERRAAYAADITYGTNNEFGFDYL 187
Query: 85 RDNLAANSEQLVMR-----WPKPFHFAIVDEVDSVLIDEGRN--------------PLLI 125
RDN+ E V R ++DE + LI G P L
Sbjct: 188 RDNMKFALEDYVQRPFFFSIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPHLK 247
Query: 126 SGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND 185
GE K+V ++ K + G +TV+ K S LTEEG+A E L+ ++L+D
Sbjct: 248 KGEV-KEVEANTLSGK--RKVYTG-DFTVDEKARSSSLTEEGVAKVEKLLKIDNLYDPRH 303
Query: 186 -PWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGL 244
V AL+A +RRDV Y+V++G+ +I++E TGR+ RRWS+G+HQA+EAKEG+
Sbjct: 304 MEILHHVNQALRAHALFRRDVDYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGV 363
Query: 245 KIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDL 304
+I+ ++ +A IT+Q+ F++Y KLSGMTGTA TE +EF K++++ V +PTN P +R D
Sbjct: 364 EIENENQTLATITFQNYFRMYEKLSGMTGTADTEAEEFHKIYKLEVTVIPTNRPLLRPDF 423
Query: 305 PIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARP 364
P + T R K+ +E++ G+P LVG+ S+E SE L+++L++QGIPHNVLNA
Sbjct: 424 PDVIYKTEREKFNAVIEEIKGCHEKGQPTLVGTISIEKSEVLAEILRKQGIPHNVLNA-- 481
Query: 365 KYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
K REAE VAQAGRK +TI+TNMAGRGTDI+LGGNP+ LAK+
Sbjct: 482 KQHEREAEIVAQAGRKGMVTIATNMAGRGTDILLGGNPEGLAKQ 525
Score = 310 (114.2 bits), Expect = 1.0e-137, Sum P(4) = 1.0e-137
Identities = 83/214 (38%), Positives = 122/214 (57%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y VL + C+ E EV LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 538 YEKVLAEYRTLCAREHDEVVALGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLS 597
Query: 573 LQDEMFQKFSFD-TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
L+D++ + F + S +D + +I +E I I + + Q E + F IRK L+
Sbjct: 598 LEDDLLRIFGSERVSKIMDFL-KI--EEGEAITHGMITKAIENAQKKVEAHNFEIRKHLI 654
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK-HPRYW-S 689
E+D+V+ QR+ +Y R+ IL G + + Q M ++EI ++ + H W S
Sbjct: 655 EYDDVMNKQREVIYTQRREILAG--QDIRRHFTQMMDDTIEEISSFAIEKVSAHEWDWQS 712
Query: 690 LDK-LLKEF---IAIAGKILDDLFAGISGDTLLK 719
+ + +LK + I I + +D L + S TLLK
Sbjct: 713 IGEGILKTYGFQIDIPPQTMDRL-SPESFRTLLK 745
Score = 136 (52.9 bits), Expect = 1.0e-137, Sum P(4) = 1.0e-137
Identities = 21/77 (27%), Positives = 47/77 (61%)
Query: 802 YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFIS 861
+ D M + + ++++T+D W+DHL++++ L + +R +G ++P +EYK + + F+
Sbjct: 759 FGDELMDHLIKVIMLQTIDAQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKKEAYQLFMD 818
Query: 862 MLSATRRLTVESLVQYW 878
M++ TVE + +W
Sbjct: 819 MMARIAAETVEKI--FW 833
Score = 106 (42.4 bits), Expect = 1.0e-137, Sum P(4) = 1.0e-137
Identities = 20/24 (83%), Positives = 21/24 (87%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ+IGG VLH G IAEMKT
Sbjct: 81 MRHFDVQLIGGMVLHQGKIAEMKT 104
Score = 40 (19.1 bits), Expect = 7.4e-39, Sum P(4) = 7.4e-39
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 74 TNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLID 117
TN + G D L L N E L +W + A +E + VL +
Sbjct: 504 TNMAGRGTDIL---LGGNPEGLAKQWRRANPDAPEEEYEKVLAE 544
>TIGR_CMR|DET_0434 [details] [associations]
symbol:DET_0434 "preprotein translocase, SecA subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0017038
HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_181178.1 ProteinModelPortal:Q3Z9C1
STRING:Q3Z9C1 GeneID:3230233 KEGG:det:DET0434 PATRIC:21607937
BioCyc:DETH243164:GJNF-434-MONOMER Uniprot:Q3Z9C1
Length = 952
Score = 790 (283.2 bits), Expect = 2.3e-137, Sum P(5) = 2.3e-137
Identities = 169/353 (47%), Positives = 233/353 (66%)
Query: 60 PEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEG 119
P R+ Y+ DITY ++E GFDYLRDNL + Q V R ++AIVDE+D++LIDE
Sbjct: 238 PISRQEAYKADITYGTSTEFGFDYLRDNLRPDLAQCVQR---EMNYAIVDEIDNLLIDEA 294
Query: 120 RNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALET-- 177
R PL+IS ++ Y V A++A L G Y + K+ + ELTE+G A E L
Sbjct: 295 RTPLIISAPDTEAGKLYEVFARLAPRLAAGKDYEINEKDRNAELTEDGWANVEKLLSREG 354
Query: 178 ----NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSE 232
+ L+D +N P R + NAL AKEFY++D QY+V+ + +II+E TGR+ RR+SE
Sbjct: 355 VMKGSSLYDPQNAPLIRHLRNALSAKEFYKKDHQYVVKENEVIIIDEFTGRMMLGRRYSE 414
Query: 233 GIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIE 292
G+HQA+EAKE +KIQ +S A +T Q+LF++Y KL GMTGTA TE +EF K++++ V+
Sbjct: 415 GLHQAIEAKEHVKIQQESKTYATVTIQNLFRMYRKLCGMTGTAATEAEEFSKIYKLEVVI 474
Query: 293 VPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQ 352
+PTN P IR D Q + K++ E+ M LGRPVLVG+ S+ENSE LS++LK+
Sbjct: 475 IPTNKPAIREDYGDQIYKDQSAKFKAVVNEINEMRNLGRPVLVGTVSIENSEMLSNMLKR 534
Query: 353 QGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGN--PK 403
QGI H VLNA K +EA+ VA+AG+ A+T++TNMAGRG DI+LGG PK
Sbjct: 535 QGIEHKVLNA--KQHEKEAQVVAEAGKPGAVTVATNMAGRGVDILLGGKEPPK 585
Score = 301 (111.0 bits), Expect = 2.3e-137, Sum P(5) = 2.3e-137
Identities = 79/200 (39%), Positives = 114/200 (57%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V GGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF V+L D++ ++F + +
Sbjct: 600 QVLEAGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFYVALDDDIMRRFGSERIQGI 659
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ DE+ PIE + R L Q E Y+F +RK LVE+D+V+ R+ +Y R+
Sbjct: 660 --MEWAGMDENTPIENGLVSRTLENAQKRVEGYHFDVRKHLVEYDDVVNKHREVIYAERR 717
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR-YWSLDKLLKEFIAIAGKILDDL 708
IL GA+ + + + +EI+ +H + Y S + L+ + G I L
Sbjct: 718 KILLGADLKSN-----ILDMIREEIM---TQTAEHTQGYDSSEWNLEGLVTHIGGIFA-L 768
Query: 709 FAGISGDTLLK-SIEELPEL 727
A I+ + L K S EE+ EL
Sbjct: 769 PAEINAEALAKLSQEEITEL 788
Score = 110 (43.8 bits), Expect = 2.3e-137, Sum P(5) = 2.3e-137
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNS 77
+VTVNDYLA+RDA WM V+ LG+SV I P E + D TYT+ +
Sbjct: 176 LVTVNDYLARRDAYWMGPVYHALGVSVSSIYPMQTPTEELPSRLFDPTYTSET 228
Score = 103 (41.3 bits), Expect = 2.3e-137, Sum P(5) = 2.3e-137
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER +++ TLD W +HL M L + +++F R+PL YK +G F +L
Sbjct: 809 MRLLERIIMLHTLDSLWVEHLTIMENLRREIGLQAFAQRDPLIAYKNEGHVRFQELLETI 868
Query: 867 RRLTVESL 874
+ V ++
Sbjct: 869 KHDVVHNI 876
Score = 96 (38.9 bits), Expect = 2.3e-137, Sum P(5) = 2.3e-137
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
+RH+DVQ+IGG VLH G IAEM+T
Sbjct: 129 LRHYDVQLIGGMVLHHGKIAEMRT 152
Score = 51 (23.0 bits), Expect = 1.6e-41, Sum P(5) = 1.6e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 184 NDPWARFVMNALKAKEFYRRDVQY 207
NDPW F + +E Y+ D+ Y
Sbjct: 230 NDPWMHF--RPISRQEAYKADITY 251
Score = 48 (22.0 bits), Expect = 2.7e-14, Sum P(5) = 2.7e-14
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 526 NEGSEVKRLGGLHVIGT-SLHESRRIDNQLRGRAG 559
NE +E++ LG ++GT S+ S + N L+ R G
Sbjct: 503 NEINEMRNLGRPVLVGTVSIENSEMLSNMLK-RQG 536
>TIGR_CMR|BA_5421 [details] [associations]
symbol:BA_5421 "preprotein translocase, SecA subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR001650
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF00271 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 GO:GO:0004386 GO:GO:0017038
RefSeq:NP_847590.1 RefSeq:YP_022083.1 RefSeq:YP_031277.1
HSSP:P10408 ProteinModelPortal:Q81X26 SMR:Q81X26 DNASU:1085014
EnsemblBacteria:EBBACT00000011636 EnsemblBacteria:EBBACT00000014899
EnsemblBacteria:EBBACT00000020362 GeneID:1085014 GeneID:2818649
GeneID:2851945 KEGG:ban:BA_5421 KEGG:bar:GBAA_5421 KEGG:bat:BAS5038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 BioCyc:BANT260799:GJAJ-5113-MONOMER
BioCyc:BANT261594:GJ7F-5289-MONOMER Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 Uniprot:Q81X26
Length = 835
Score = 908 (324.7 bits), Expect = 1.5e-136, Sum P(4) = 1.5e-136
Identities = 185/387 (47%), Positives = 262/387 (67%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVN+YLAQRDA M ++H FLGL+VG+ M EE++ Y DITY+ N+ELGFDYL
Sbjct: 126 VVTVNEYLAQRDANEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYL 185
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+ EQ V R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A
Sbjct: 186 RDNMVLYKEQCVQR---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVR 242
Query: 145 LLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRR 203
L Y+ ++K +V LTE+GI AE A +L+D ++ + AL+A R
Sbjct: 243 TLENEKDYSFDVKTKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHR 302
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D Y+V+ G+ +I+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F+
Sbjct: 303 DTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFR 362
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
+Y KLSGMTGTAKTEE+EF ++ M VI +PTN P IR D F + +GK+ +++
Sbjct: 363 MYEKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMKGKFNAVVEDI 422
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ + G+PVLVG+ ++E SE +S +L ++G+ HN+LNA K AREA+ +A+AG K A+
Sbjct: 423 VNRHKQGQPVLVGTVAIETSELISKMLTRKGVRHNILNA--KNHAREADIIAEAGMKGAV 480
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKII 410
TI+TNMAGRGTDI LG + K + +I
Sbjct: 481 TIATNMAGRGTDIKLGDDIKNIGLAVI 507
Score = 279 (103.3 bits), Expect = 1.5e-136, Sum P(4) = 1.5e-136
Identities = 57/129 (44%), Positives = 82/129 (63%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G ++K +G L VIGT HESRRIDNQLRGRAGRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GDDIKNIG-LAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PIE + R + Q E + RK L+++D+VL QR+ +Y
Sbjct: 555 A--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQ 612
Query: 648 RQSILTGAN 656
RQ ++ N
Sbjct: 613 RQEVMESEN 621
Score = 118 (46.6 bits), Expect = 1.5e-136, Sum P(4) = 1.5e-136
Identities = 20/68 (29%), Positives = 42/68 (61%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + M+E E+ V+ + +D W +H+ M+ L +++R++G +PL EY+++G
Sbjct: 697 KEKLMPEEQMREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFA 756
Query: 858 FFISMLSA 865
F SM+++
Sbjct: 757 MFESMIAS 764
Score = 79 (32.9 bits), Expect = 1.5e-136, Sum P(4) = 1.5e-136
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MR + VQ++GG LH+G+I+EMKT
Sbjct: 79 MRPYGVQLMGGIALHEGNISEMKT 102
>UNIPROTKB|Q7WWK0 [details] [associations]
symbol:secA "Protein translocase subunit SecA" species:1318
"Streptococcus parasanguinis" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
GO:GO:0065002 GO:GO:0017038 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 EMBL:AY333118
ProteinModelPortal:Q7WWK0 SMR:Q7WWK0 IntAct:Q7WWK0 Uniprot:Q7WWK0
Length = 838
Score = 863 (308.9 bits), Expect = 1.3e-129, Sum P(4) = 1.3e-129
Identities = 173/378 (45%), Positives = 257/378 (67%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVN+YL +RDA M ++ +LGLSVG+ P E++ Y CDITY+ NSE+GFDYL
Sbjct: 126 VVTVNEYLTERDATEMGELYSWLGLSVGINLAAKSPAEKKEAYLCDITYSTNSEIGFDYL 185
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVA 143
RDN+ +E +V R P ++A+VDEVDS+LIDE R PL++SG+ + D ++ Y +A
Sbjct: 186 RDNMVVRAENMVQR---PLNYALVDEVDSILIDEARTPLIVSGQTASDTSQLYHMADAYV 242
Query: 144 ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
+ L + Y +++ + ++ L++ GI AE +L+D EN F+ NAL+A
Sbjct: 243 KTLTED-DYIIDVPSKTIGLSDSGIDKAESYFNLENLYDIENVALTHFIDNALRANYIMI 301
Query: 203 RDVQYIV-RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
D+ Y+V + + LI+++ TGR E RR+S+G+HQA+EAKEG+ +Q ++ A ITYQ+L
Sbjct: 302 LDIDYVVSEDQEILIVDQFTGRTMEGRRYSDGLHQAIEAKEGVPVQEETKTSASITYQNL 361
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F++Y KLSGMTGT KTEE+EF +++ + VI +PTN P R+D P + + + K++ +
Sbjct: 362 FRMYKKLSGMTGTGKTEEEEFREIYNIRVIPIPTNRPIARIDHPDLLYPSLKSKFKAVVE 421
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
+V+S G+PVLVG+ +VE S+YLS LL Q G+PH VLNA+ Y +EA+ + AG++
Sbjct: 422 DVKSRHEKGQPVLVGTVAVETSDYLSQLLVQAGVPHEVLNAKNHY--KEAQIIMNAGQRG 479
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI LG
Sbjct: 480 AVTIATNMAGRGTDIKLG 497
Score = 278 (102.9 bits), Expect = 1.3e-129, Sum P(4) = 1.3e-129
Identities = 62/160 (38%), Positives = 95/160 (59%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F +
Sbjct: 497 GEGVRELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDELMRRFGSERIK 556
Query: 588 AVDLISRIT-NDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
AV + R ++E+ I + RQ+ G Q E + RK ++++D+V+ QR+ +Y
Sbjct: 557 AV--LDRFKLSEEESVIRSNMFTRQVEGAQKRVEGNNYDTRKQVLQYDDVMREQREIIYA 614
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
R ++T AN + +I ++ + I+ G K R
Sbjct: 615 ERYDVIT-ANRDLAPEIKAMIKRTIKRIVEGASHSSKEER 653
Score = 111 (44.1 bits), Expect = 1.3e-129, Sum P(4) = 1.3e-129
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 793 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
Y + V + R D+ ++E ++ ++++ +D W DH+ +++L +AV +R + NP+ EY+
Sbjct: 696 YASQVAKLR-DEESVQEFQKVLILRVVDSKWTDHIDALDQLRNAVGLRGYAQNNPVVEYQ 754
Query: 853 IDGCRFFISMLSA 865
+ R F M+ +
Sbjct: 755 SESFRMFNDMIGS 767
Score = 66 (28.3 bits), Expect = 1.3e-129, Sum P(4) = 1.3e-129
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT 24
+ VQ++GG VLH G + EM+T
Sbjct: 82 YKVQVMGGIVLHHGDVPEMRT 102
>TIGR_CMR|APH_1178 [details] [associations]
symbol:APH_1178 "preprotein translocase, SecA subunit"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:CP000235 GenomeReviews:CP000235_GR InterPro:IPR014001
SMART:SM00487 GO:GO:0017038 eggNOG:COG0653 KO:K03070
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_505716.1 ProteinModelPortal:Q2GIT5
SMR:Q2GIT5 STRING:Q2GIT5 GeneID:3930719 KEGG:aph:APH_1178
PATRIC:20951136 OMA:NMEVIEI BioCyc:APHA212042:GHPM-1184-MONOMER
Uniprot:Q2GIT5
Length = 873
Score = 861 (308.1 bits), Expect = 3.3e-129, Sum P(4) = 3.3e-129
Identities = 185/392 (47%), Positives = 259/392 (66%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVNDYLA+RD+EWM +++ LG+SVG I E R++ Y CDI Y+ N+ELGFDYL
Sbjct: 129 VVTVNDYLAERDSEWMGKLYSALGISVGCITSSSSDEARKAAYNCDILYSTNNELGFDYL 188
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVA 143
RDN+ + E +V R +++AIVDEVDS+LIDE R PL+ISG +D + Y V A V
Sbjct: 189 RDNMKFSRENMVQRG---YNYAIVDEVDSILIDESRTPLIISGPVERDSSLYGKVDALVR 245
Query: 144 ELLVQGLHYTVELKNNSVELTEEGIALAEMAL-------ETNDLWD-ENDPWARFVMNAL 195
+L + Y ++ K+ + LTE+G E L E + L+ EN +V AL
Sbjct: 246 DLEQED--YDIDEKSKTAFLTEDGALKVEQLLISHQLIPEGSSLYSAENIIMMHYVGQAL 303
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
+A + Y D YIV+NG +II+E TGR+ + RR+S+G+HQA+EAKEG++I ++ +A
Sbjct: 304 RAHKLYFADKDYIVKNGSVVIIDEFTGRMMDGRRYSDGLHQALEAKEGVRINNENQTLAS 363
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
T+Q+ F++Y +LSGMTGTA+TE EFL + + V+++PTN+P RVDL + T K
Sbjct: 364 TTFQNYFRMYKRLSGMTGTAETEADEFLGTYNLQVMQIPTNVPVQRVDLDDDIYCTEEEK 423
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+E + + +P LVG+ S+E SE LS LL +GI H+VLNAR Y +EA +A
Sbjct: 424 YEAVIDFIIECHKRKQPTLVGTISIEKSELLSKLLTMRGIKHSVLNAR--YHEKEAYIIA 481
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
QAG+ A+TI+TNMAGRGTDI LGGNP+MLA+
Sbjct: 482 QAGKPGAVTIATNMAGRGTDIKLGGNPEMLAR 513
Score = 233 (87.1 bits), Expect = 3.3e-129, Sum P(4) = 3.3e-129
Identities = 53/122 (43%), Positives = 73/122 (59%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V + GGL +IGT HESRRIDNQLRGR+GRQGDPG ++F +SL+D + + F D
Sbjct: 543 VMQAGGLCIIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDGLLRIFGSDK--VRG 600
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ R+ I+ I R + Q E + IRKSL+ FD+V+ QRK ++ R
Sbjct: 601 MLKRLGMKRGEAIQHKWINRAIERAQKKVEARNYDIRKSLLRFDDVINEQRKVIFAQRNQ 660
Query: 651 IL 652
IL
Sbjct: 661 IL 662
Score = 121 (47.7 bits), Expect = 3.3e-129, Sum P(4) = 3.3e-129
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R VL+ +LD W DHL ++ L +N+RS G ++PL E+KI+ MLS + +
Sbjct: 759 RRVLITSLDHLWTDHLAALDSLKCGINLRSVGQKDPLNEFKIEAFYLLEKMLSRFYEMVI 818
Query: 872 ESL 874
+ L
Sbjct: 819 QKL 821
Score = 99 (39.9 bits), Expect = 3.3e-129, Sum P(4) = 3.3e-129
Identities = 19/24 (79%), Positives = 20/24 (83%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ+IGG LH G IAEMKT
Sbjct: 82 MRHFDVQLIGGIALHRGMIAEMKT 105
Score = 44 (20.5 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVE-AKEGLKI--QADSVVVAQITYQSLFKLYPK 267
N + L NEL G +E+ R ++ I++ +E AK +I QA + + ++ +
Sbjct: 507 NPEMLARNELAGITDEEER-AKRINKIIEQAKHDKEIVMQAGGLCIIGTERHESRRIDNQ 565
Query: 268 LSGMTG 273
L G +G
Sbjct: 566 LRGRSG 571
>TIGR_CMR|CJE_1020 [details] [associations]
symbol:CJE_1020 "preprotein translocase, SecA subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR001650
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
Pfam:PF00271 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
GO:GO:0003676 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004386
GO:GO:0017038 HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_179018.1 ProteinModelPortal:Q5HUL7
STRING:Q5HUL7 GeneID:3231531 KEGG:cjr:CJE1020 PATRIC:20043841
BioCyc:CJEJ195099:GJC0-1048-MONOMER Uniprot:Q5HUL7
Length = 862
Score = 792 (283.9 bits), Expect = 1.4e-128, Sum P(4) = 1.4e-128
Identities = 171/384 (44%), Positives = 247/384 (64%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPE-ERRSNYRCDITYTNNSELGFDY 83
VVTVNDYLA+RDAE M ++ FLG SVG++ + E + Y CDITY N+E GFDY
Sbjct: 129 VVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLSSQNSDIEHKQAYDCDITYGTNNEFGFDY 188
Query: 84 LRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA 143
LRDN+ + + V R +F IVDEVDS+LIDE R PL+ISG ++ + Y A +VA
Sbjct: 189 LRDNMKFSKAEKVQR---EHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIKANEVA 245
Query: 144 ELLVQGL----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVM 192
+ + +G + V+ KN ++ +TE GIA AE +L+ +N A +
Sbjct: 246 KQMQKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAILAHQLD 305
Query: 193 NALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVV 252
ALKA + +DV Y++RN + +I++E TGR+ E RR+SEG+HQA+EAKE +KIQ +S
Sbjct: 306 QALKAHNLFEKDVHYVLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQEESQT 365
Query: 253 VAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATA 312
+A IT+Q+ F++Y KL+GMTGTA+TE EF +++ + VI +PTN+P R D + T
Sbjct: 366 LADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQ 425
Query: 313 RGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAE 372
K++ +E++ G+PVLVG+ S+E SE ++L ++ IPH+VLNA K +EA
Sbjct: 426 NEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNA--KNHEQEAL 483
Query: 373 TVAQAGRKYAITISTNMAGRGTDI 396
+ AG+K A+TI+TNMAGRG DI
Sbjct: 484 IIQDAGKKGAVTIATNMAGRGVDI 507
Score = 279 (103.3 bits), Expect = 1.4e-128, Sum P(4) = 1.4e-128
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E++ LGGL++IGT HESRRIDNQLRGRAGRQGDPG +RF +SL+D + + F D ++
Sbjct: 512 EIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGDRIKSI 571
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ +E IE + R + Q E +F RK L+E+D+V QRK +Y R
Sbjct: 572 --MDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYRN 629
Query: 650 SILT---GANESCSQQIFQYMQAVVDEII 675
+L SQ I +Y V+++ I
Sbjct: 630 ELLDENYDIRAKISQNIAEYSANVMNDYI 658
Score = 125 (49.1 bits), Expect = 1.4e-128, Sum P(4) = 1.4e-128
Identities = 30/124 (24%), Positives = 63/124 (50%)
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
CS +++ + ++ L IL SY + SR + ++ +ER + ++ LD W
Sbjct: 679 CSTQISEKDFENLSVIEMQDKLSQILENSYNEKM--SRLEIKELRNIERILYLQVLDNAW 736
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPME 883
R+HL M+ L + + +R + ++PL EYK + F+ +++ R+ +S+ +S
Sbjct: 737 REHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVN---RIKFDSIKLLFSVQFN 793
Query: 884 SQEL 887
+E+
Sbjct: 794 QEEV 797
Score = 112 (44.5 bits), Expect = 1.4e-128, Sum P(4) = 1.4e-128
Identities = 21/24 (87%), Positives = 22/24 (91%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ+IGG VLHDG IAEMKT
Sbjct: 82 MRHFDVQLIGGMVLHDGKIAEMKT 105
Score = 37 (18.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
Q+SA + G +V + +++ K YD I G N F Y++
Sbjct: 143 QMSAIYNFLGFSVGVVLSSQNSDIEHKQAYDC--DITYGTNNEFG---FDYLR 190
>TIGR_CMR|SPO_0057 [details] [associations]
symbol:SPO_0057 "preprotein translocase, SecA subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:YP_165331.1 ProteinModelPortal:Q5LWK0 GeneID:3194508
KEGG:sil:SPO0057 PATRIC:23373349 Uniprot:Q5LWK0
Length = 901
Score = 834 (298.6 bits), Expect = 6.0e-128, Sum P(4) = 6.0e-128
Identities = 184/395 (46%), Positives = 255/395 (64%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVN+YLA+RD+EWM +V LG++ G+I G E+ + Y DITY N+ELGFDYL
Sbjct: 130 VVTVNEYLAKRDSEWMGKVFAALGMTTGVIWSGQPDAEKMAAYESDITYATNNELGFDYL 189
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+ ++ + K +FAIVDEVDS+LIDE R PL+ISG A +D + VA
Sbjct: 190 RDNMKGELSEV---YQKQHNFAIVDEVDSILIDEARTPLIISGPA-QDRSDLYVAIDALL 245
Query: 145 LLVQGLHYTVELKNNSVELTEEGIALAEMAL-------ETNDLWD-ENDPWARFVMNALK 196
+ H+ ++ K +V T+EG E L E L+D E+ V L+
Sbjct: 246 PALSDDHFELDEKTRNVTFTDEGNEFLEAQLVARGLLPEGQSLYDPESTTIVHHVNQGLR 305
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A + ++RD YIVR+G+ ++I+E TGR+ RR S+G+HQA+EAKE +IQ ++V +A +
Sbjct: 306 AHKLFQRDKDYIVRDGEVVLIDEFTGRMMPGRRLSDGLHQAIEAKENAQIQPENVTLASV 365
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F+LY KLSGMTGTA TE +EF +++ + V+EVPTN P R D Q + TA K+
Sbjct: 366 TFQNYFRLYDKLSGMTGTALTEAEEFAEIYGLGVVEVPTNRPIARTDEDDQVYRTAAEKY 425
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
E + G+PVL+G+TS+E SE LS +L ++GI HNVLNAR REA+ VA+
Sbjct: 426 GAMIDETKKAHEKGQPVLLGTTSIEKSEMLSQMLTKEGIEHNVLNARQH--EREAQIVAE 483
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIE 411
AGR A+TI+TNMAGRGTDI LGGN +M K++E
Sbjct: 484 AGRYGAVTIATNMAGRGTDIQLGGNVEM---KVLE 515
Score = 249 (92.7 bits), Expect = 6.0e-128, Sum P(4) = 6.0e-128
Identities = 63/187 (33%), Positives = 100/187 (53%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
E + E +V GGL+V+ + HESRRIDNQLRGR+GRQGDPG T F +SL+D++ +
Sbjct: 533 EARHAEEKQKVLDAGGLYVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLMRI 592
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIV-----RQLLGLQISAEKYYFGIRKSLVEFDE 635
F + + ++ M EG+AI+ + L Q E F +RK++++FD+
Sbjct: 593 FGSER------LDKVLTTLGMK-EGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDD 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V+ QRK +++ R+ I+ A E S + + V+D++I + P + W L
Sbjct: 646 VMNDQRKVIFNQRREIM--ATEDLSDVVADMREQVIDDLIDEYMPPKTYADQWDTQGLYA 703
Query: 696 EFIAIAG 702
I G
Sbjct: 704 AVIEKLG 710
Score = 140 (54.3 bits), Expect = 6.0e-128, Sum P(4) = 6.0e-128
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +E+ VL++T+D WR+HL+ + L S V R + R+PL EYK + + F +L +
Sbjct: 753 MRNIEKQVLLQTIDSKWREHLLKLEHLRSVVGFRGYAQRDPLNEYKTESFQLFEGLLDSL 812
Query: 867 RRLTVESL 874
R + L
Sbjct: 813 RETVTQQL 820
Score = 79 (32.9 bits), Expect = 6.0e-128, Sum P(4) = 6.0e-128
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
+R FD Q++GG LH G+I+EMKT
Sbjct: 83 LRAFDTQLMGGIFLHQGNISEMKT 106
>NCBI_NP|NP_357091.2 [details] [associations]
symbol:secA "preprotein translocase subunit SecA"
species:176299 "Agrobacterium fabrum str. C58" [GO:0015627 "type II
protein secretion system complex" evidence=ISS] [GO:0015628
"protein secretion by the type II secretion system" evidence=ISS]
REFSEQ:NC_003063 Ncbi:NP_357091
Length = 902
Score = 807 (289.1 bits), Expect = 2.0e-125, Sum P(4) = 2.0e-125
Identities = 182/395 (46%), Positives = 251/395 (63%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVNDYLA+RDA M +++ FLGL+ G+I G+ ++RR Y CDITY N+ELGFDYL
Sbjct: 130 VVTVNDYLAKRDAATMSKLYGFLGLTTGVIVHGLDDDQRREAYACDITYATNNELGFDYL 189
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+ + Q+V R ++AIVDEVDS+L+DE R PL+ISG Y
Sbjct: 190 RDNMKYDRAQMVQRG---HNYAIVDEVDSILVDEARTPLIISGPLDDRSDLYNTIDAFIP 246
Query: 145 LLVQGLHYTVELKNNSVELTEEGIA----LAEMA--LETNDLWD-ENDPWARFVMNALKA 197
LL Y ++ K S +E+G L A L+ L+D EN + NALKA
Sbjct: 247 LLSPE-DYEIDEKQRSANFSEDGTEKLENLLRQAGLLKGESLYDIENVAIVHHINNALKA 305
Query: 198 KEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQIT 257
+ + RD YIVRN + +II+E TGR+ RR+SEG HQA+EAKE ++IQ ++ ++ +T
Sbjct: 306 HKLFTRDKDYIVRNDEIVIIDEFTGRMMPGRRYSEGQHQALEAKEKVQIQPENQTLSSVT 365
Query: 258 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWE 317
+Q+ F++Y KL+GMTGTA TE +EF ++ + VIEVPTNLP R+D + + T K+
Sbjct: 366 FQNYFRMYEKLAGMTGTASTEAEEFGNIYGLDVIEVPTNLPIQRIDEDDEVYRTGEEKFL 425
Query: 318 YARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPH-NVLNARPKYAAREAETVAQ 376
E+++ G+PVLVG+TS+E SE L+ +L+Q G VLNAR Y +EA V+Q
Sbjct: 426 AIITEIKAAHERGQPVLVGTTSIEKSELLAHMLRQSGFTDFQVLNAR--YHEQEAYIVSQ 483
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIE 411
AG A+TI+TNMAGRGTDI LGGN M ++ +E
Sbjct: 484 AGVPGAVTIATNMAGRGTDIQLGGNVDMRLERELE 518
Score = 234 (87.4 bits), Expect = 2.0e-125, Sum P(4) = 2.0e-125
Identities = 66/213 (30%), Positives = 115/213 (53%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD-LIS 593
GGL+VI T HESRRIDNQLRGR+GRQGDPG ++F +SLQD++ + F S +D ++
Sbjct: 548 GGLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFG---SERMDSMLQ 604
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
++ + I I + L Q E F RK+L+++D+VL QRK ++D R ++
Sbjct: 605 KLGLKDGEAIVHPWINKALERAQKKVEARNFETRKNLLKYDDVLNDQRKVIFDQRLELME 664
Query: 654 GAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILD-D 707
N E+ + + ++A+V + I N + W + L + +F+ + + +
Sbjct: 665 ADNIGETAADMRHEVIEALVTKHIPENA----YAEQWDIAGLKAGIAQFLNLDLPVEEWA 720
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
GI+ D +L+ + E + + + + P++
Sbjct: 721 KEEGIAEDDILQRVTEAADTYAAERAERFGPEI 753
Score = 153 (58.9 bits), Expect = 2.0e-125, Sum P(4) = 2.0e-125
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 801 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFI 860
R+ M VER+V+++T+D WR+H++N++ L S V R + R+PL+EYK + F
Sbjct: 748 RFGPEIMTYVERSVILQTIDHLWREHIVNLDHLRSVVGFRGYAQRDPLQEYKAEAFELFQ 807
Query: 861 SMLSATRRLTVESLVQYWSSPMESQE 886
S+L+ R L++ E Q+
Sbjct: 808 SLLTNLREAVTAQLMRVELVQQEPQQ 833
Score = 84 (34.6 bits), Expect = 2.0e-125, Sum P(4) = 2.0e-125
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MR FDVQ+ G +LH G+IAEMKT
Sbjct: 83 MRPFDVQLTGAMILHGGAIAEMKT 106
Score = 42 (19.8 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQ 665
L+ + ++L QS+LT E+ + Q+ +
Sbjct: 795 LQEYKAEAFELFQSLLTNLREAVTAQLMR 823
>TIGR_CMR|NSE_0232 [details] [associations]
symbol:NSE_0232 "preprotein translocase, SecA subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 OMA:NMEVIEI
RefSeq:YP_506126.1 ProteinModelPortal:Q2GEH0 STRING:Q2GEH0
GeneID:3931784 KEGG:nse:NSE_0232 PATRIC:22680561
ProtClustDB:CLSK2528079 BioCyc:NSEN222891:GHFU-262-MONOMER
Uniprot:Q2GEH0
Length = 804
Score = 827 (296.2 bits), Expect = 5.2e-125, Sum P(4) = 5.2e-125
Identities = 182/385 (47%), Positives = 256/385 (66%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVNDYLA+RD EWM++++R LGL V I M ER Y+ DITY N+ELGFDYL
Sbjct: 128 VVTVNDYLARRDTEWMKQIYRHLGLQVSCITSDMRDPERAHAYKADITYATNNELGFDYL 187
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+ + ++V R H+AIVDEVDS+LIDE R PL+ISG Y K+AE
Sbjct: 188 RDNMKFSKGEMVQR---DLHYAIVDEVDSILIDEARTPLIISGVTDNASYLYASMNKLAE 244
Query: 145 LLVQGLHYTVELKNNSVELTEEG------IALAEMALET-NDLWD-ENDPWARFVMNALK 196
L L Y V+ K +V LTEEG + +AE +E+ + L++ +N + +LK
Sbjct: 245 KLDSTL-YIVDEKTRTVSLTEEGQEAIEKLLMAEKFIESGSSLYEPQNLQLVHCLNQSLK 303
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A ++++ YIV++G+ ++I+E TGR+ RR+SEG+HQA+EAKE LKIQ ++ +A I
Sbjct: 304 AINLFQKNKDYIVQDGQIVLIDEFTGRMMHGRRYSEGLHQALEAKENLKIQNENQTLASI 363
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KLSGMTGTA TE +EF ++ + V+++P++LP RVD + +A+ + K+
Sbjct: 364 TFQNYFRMYGKLSGMTGTAATEREEFSTIYGLEVVQIPSHLPVRRVDHDDEIYASKKEKY 423
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
E + +P+L+G+TS+ENSE LS LK+ + H+VLNA K A EAE +AQ
Sbjct: 424 EAILALAKECHEKLQPILIGTTSIENSEELSRELKKAKLKHSVLNA--KQHAFEAEIIAQ 481
Query: 377 AGRKYAITISTNMAGRGTDIILGGN 401
AG+ AITI+TNMAGRGTDI LGGN
Sbjct: 482 AGKPGAITIATNMAGRGTDIQLGGN 506
Score = 259 (96.2 bits), Expect = 5.2e-125, Sum P(4) = 5.2e-125
Identities = 56/130 (43%), Positives = 83/130 (63%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
H NE V++ GGL+VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL D++ + F
Sbjct: 521 HAKNE-EIVRKAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGESKFFLSLDDDLLRVFG 579
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
TS +++ + ++ I+ I R L Q E + IRK+L++FD+V+ QRK
Sbjct: 580 --TSGIRNMLKKQLSNNGA-IKHSYITRSLEKAQKKVESRNYEIRKNLIKFDDVINEQRK 636
Query: 643 HVYDLRQSIL 652
++ R +I+
Sbjct: 637 VIFSQRNNIM 646
Score = 97 (39.2 bits), Expect = 5.2e-125, Sum P(4) = 5.2e-125
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 796 VVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDG 855
+ ++ R ++ E+++ +++ LD W++HL + L ++N+++ +NPL E+K +
Sbjct: 712 IAEKERAHVEFLLEIKKRIMIAILDQLWKEHLQFLENLRLSINLKAVAQKNPLIEFKHEA 771
Query: 856 CRFF 859
+ F
Sbjct: 772 FQAF 775
Score = 91 (37.1 bits), Expect = 5.2e-125, Sum P(4) = 5.2e-125
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQI+GG VLH G I+EM T
Sbjct: 81 MRHFDVQIMGGIVLHWGMISEMHT 104
>TIGR_CMR|CBU_0147 [details] [associations]
symbol:CBU_0147 "preprotein translocase, SecA subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0009898 "internal
side of plasma membrane" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] [GO:0015627 "type II protein secretion
system complex" evidence=ISS] [GO:0015628 "protein secretion by the
type II secretion system" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:NP_819197.2 HSSP:P43803 ProteinModelPortal:Q83F06 SMR:Q83F06
PRIDE:Q83F06 GeneID:1208018 KEGG:cbu:CBU_0147 PATRIC:17928977
BioCyc:CBUR227377:GJ7S-148-MONOMER Uniprot:Q83F06
Length = 913
Score = 539 (194.8 bits), Expect = 2.6e-121, Sum P(5) = 2.6e-121
Identities = 116/258 (44%), Positives = 167/258 (64%)
Query: 152 YTVELKNNSVELTEEG------IALAEMALETND-LWD-ENDPWARFVMNALKAKEFYRR 203
YT++ KN LTE+G + + + ++ + L+D N +V AL+A + R
Sbjct: 268 YTLDEKNRQAYLTEQGHRTIEALMIKQGLMQAGESLYDVSNISLMHYVYAALRAHTLFYR 327
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
DV YIV+N + +I++E TGR+ RRWS+G+HQAVEAKEG IQ ++ +A IT+Q+ F+
Sbjct: 328 DVHYIVKNNEVIIVDEHTGRLMPGRRWSDGLHQAVEAKEGATIQLENQTLATITFQNYFR 387
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KLSGMT TA TE E K++ + V+ +PTN P IR D Q + TA K++ EV
Sbjct: 388 LYEKLSGMTATADTEAFELQKIYGLEVVVIPTNRPMIRRDESDQVYLTADAKFDAIVNEV 447
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ G+P+L+G+ S+E SE ++ LK+ I H +LNA K REA+ +A+AGR A+
Sbjct: 448 KKRHEKGQPLLIGTASIEASELVARFLKKANIKHEILNA--KNHEREAKIIAEAGRPGAV 505
Query: 384 TISTNMAGRGTDIILGGN 401
TI+TNMAGRGTDI+LGGN
Sbjct: 506 TIATNMAGRGTDIVLGGN 523
Score = 336 (123.3 bits), Expect = 2.6e-121, Sum P(5) = 2.6e-121
Identities = 74/159 (46%), Positives = 101/159 (63%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
+VTVNDYLA+RDAEWM+ ++ FLGL+VG+ GM P E+++ Y DITY N+E GFDYL
Sbjct: 128 IVTVNDYLAKRDAEWMKPIYEFLGLTVGVNVPGMEPVEKQAAYAADITYGTNNEFGFDYL 187
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK-VA 143
RDN+ + +Q V R P H+AI+DEVDS+LIDE R PL+ISG+A + Y K +
Sbjct: 188 RDNMVFDLDQRVQR---PLHYAIIDEVDSILIDEARTPLIISGQAEESSDLYVKINKFIP 244
Query: 144 ELLVQGLH---------------YTVELKNNSVELTEEG 167
+L +Q + YT++ KN LTE+G
Sbjct: 245 QLKLQKMEEGQKEEEVPPENRGDYTLDEKNRQAYLTEQG 283
Score = 276 (102.2 bits), Expect = 2.6e-121, Sum P(5) = 2.6e-121
Identities = 67/170 (39%), Positives = 96/170 (56%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLHV+GT HESRRIDNQLRGR+GRQGDPGS++F +S++D + + F+ + +++ R
Sbjct: 557 GGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQFYLSMEDNLLRIFAAERM--SNMMRR 614
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ ED IE I R + Q E F IRK L+E+D+V QRK +Y R +L
Sbjct: 615 LGVKEDDVIEHPWITRAIEKAQRRVEGMNFDIRKQLLEYDDVANDQRKVIYQQRFQLLQ- 673
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS---LDKLLKEFIAIA 701
+ S+ I + V E+I V P W L+K ++E +A
Sbjct: 674 -TDDISETIEAIREEAVSEMISSFVPPQSLEEEWDIPGLEKQIREDFGLA 722
Score = 134 (52.2 bits), Expect = 2.6e-121, Sum P(5) = 2.6e-121
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 781 LRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR 840
L K + D + +Y +E++ D M+EVE+ ++++ LD W++HL M+ L +++R
Sbjct: 740 LHKRIIDEITKAYK--AKEAKADPKAMREVEKTLMLQLLDHHWKEHLAAMDHLRQGIHLR 797
Query: 841 SFGHRNPLEEYKIDGCRFFISML 863
+ +NP +EYK + F ML
Sbjct: 798 GYAQKNPAQEYKRESFELFTQML 820
Score = 97 (39.2 bits), Expect = 2.6e-121, Sum P(5) = 2.6e-121
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
+RHFDVQIIGG LH G IAEM+T
Sbjct: 81 LRHFDVQIIGGLALHGGKIAEMRT 104
>TIGR_CMR|BA_0882 [details] [associations]
symbol:BA_0882 "preprotein translocase, SecA subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
RefSeq:NP_843394.1 RefSeq:YP_017518.1 RefSeq:YP_027114.1
HSSP:P28366 ProteinModelPortal:Q81UI7 IntAct:Q81UI7 DNASU:1088471
EnsemblBacteria:EBBACT00000009335 EnsemblBacteria:EBBACT00000014039
EnsemblBacteria:EBBACT00000020428 GeneID:1088471 GeneID:2818591
GeneID:2848526 KEGG:ban:BA_0882 KEGG:bar:GBAA_0882 KEGG:bat:BAS0838
OMA:FGIDNLY ProtClustDB:PRK09200 BioCyc:BANT260799:GJAJ-918-MONOMER
BioCyc:BANT261594:GJ7F-948-MONOMER Uniprot:Q81UI7
Length = 788
Score = 833 (298.3 bits), Expect = 2.2e-120, Sum P(4) = 2.2e-120
Identities = 174/376 (46%), Positives = 250/376 (66%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
V+TVNDYLA+RD E + +VH FLGL VGL + P E++ Y DITY +E GFDYL
Sbjct: 127 VITVNDYLAKRDKELIGQVHEFLGLKVGLNIPQIDPSEKKLAYEADITYGIGTEFGFDYL 186
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+AA+ + V R P+HFAI+DE+DSVLIDE + PL+I+G+ S + + AKV +
Sbjct: 187 RDNMAASKNEQVQR---PYHFAIIDEIDSVLIDEAKTPLIIAGKKSSSSDLHYLCAKVIK 243
Query: 145 LLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRR 203
LHYT + ++ S TE+GI E + ++L+D E+ +++ AL+A ++
Sbjct: 244 SFQDTLHYTYDAESKSASFTEDGITKIEDLFDIDNLYDLEHQTLYHYMIQALRAHVAFQC 303
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
DV YIV + K L+++ TGRV + R S+G+HQA+EAKEGL+I ++ A IT Q+ F+
Sbjct: 304 DVDYIVHDEKILLVDIFTGRVMDGRSLSDGLHQALEAKEGLEITEENQTQASITIQNFFR 363
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
+YP LSGMTGTAKTEEKEF +++ M V+ +PTN P IR D + TA K++ R++V
Sbjct: 364 MYPALSGMTGTAKTEEKEFNRVYNMEVMPIPTNRPIIREDKKDVVYVTADAKYKAVREDV 423
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ GRP+L+G+ S+ SE ++ L + I + +LNA K A +EA+ +A AG+K I
Sbjct: 424 LKHNKQGRPILIGTMSILQSETVARYLDEANITYQLLNA--KSAEQEADLIATAGQKGQI 481
Query: 384 TISTNMAGRGTDIILG 399
TI+TNMAGRGTDI+LG
Sbjct: 482 TIATNMAGRGTDILLG 497
Score = 252 (93.8 bits), Expect = 2.2e-120, Sum P(4) = 2.2e-120
Identities = 63/176 (35%), Positives = 98/176 (55%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHVIGT HESRR+DNQL+GRAGRQGDPGS++F +SL+DEM ++F+ +
Sbjct: 497 GEGVHELGGLHVIGTERHESRRVDNQLKGRAGRQGDPGSSQFFLSLEDEMLKRFAQEE-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L + DE I + + Q+ E +F +R+ ++ D+V+ QR +Y L
Sbjct: 555 VEKLTKSLKTDETGLILTSKVHDFVNRTQLICEGSHFSMREYNLKLDDVINDQRNVIYKL 614
Query: 648 RQSIL---TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
R ++L T E I ++A+ + + + P + + SL L E +++
Sbjct: 615 RNNLLQEDTNMIEIIIPMIDHAVEAISKQYLVEGMLPEEWD-FASLTASLNEILSV 669
Score = 86 (35.3 bits), Expect = 2.2e-120, Sum P(4) = 2.2e-120
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
+RH+DVQ+IGG VL +G+IAEM T
Sbjct: 80 LRHYDVQLIGGLVLLEGNIAEMPT 103
Score = 59 (25.8 bits), Expect = 2.2e-120, Sum P(4) = 2.2e-120
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFI 860
R V + LD W +HL M L + +R + +P Y+ + F+
Sbjct: 715 RYVALHFLDQNWVNHLDAMTHLKEGIGLRQYQQEDPTRLYQKEALDIFL 763
>UNIPROTKB|P10408 [details] [associations]
symbol:secA species:83333 "Escherichia coli K-12"
[GO:0005515 "protein binding" evidence=IPI] [GO:0065002
"intracellular protein transmembrane transport" evidence=IMP]
[GO:0015031 "protein transport" evidence=IMP] [GO:0006605 "protein
targeting" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0043952 "protein transport by the Sec complex" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0017038 "protein
import" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0065002 EMBL:X55034
TCDB:3.A.5.1.1 EMBL:M19211 GO:GO:0017038 EMBL:M20791 eggNOG:COG0653
KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 GO:GO:0043952 PIR:B64732
RefSeq:NP_414640.1 RefSeq:YP_488403.1 PDB:1TM6 PDB:2FSF PDB:2FSG
PDB:2FSH PDB:2FSI PDB:2VDA PDB:3BXZ PDBsum:1TM6 PDBsum:2FSF
PDBsum:2FSG PDBsum:2FSH PDBsum:2FSI PDBsum:2VDA PDBsum:3BXZ
ProteinModelPortal:P10408 SMR:P10408 DIP:DIP-10840N IntAct:P10408
MINT:MINT-1224866 PaxDb:P10408 PRIDE:P10408
EnsemblBacteria:EBESCT00000001277 EnsemblBacteria:EBESCT00000016064
GeneID:12932123 GeneID:944821 KEGG:ecj:Y75_p0097 KEGG:eco:b0098
PATRIC:32115301 EchoBASE:EB0929 EcoGene:EG10936 BioCyc:EcoCyc:SECA
BioCyc:ECOL316407:JW0096-MONOMER EvolutionaryTrace:P10408
Genevestigator:P10408 Uniprot:P10408
Length = 901
Score = 742 (266.3 bits), Expect = 9.1e-118, Sum P(4) = 9.1e-118
Identities = 178/395 (45%), Positives = 241/395 (61%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
VVTVNDYLAQRDAE + FLGL+VG+ GM +R Y DITY N+E GFDYL
Sbjct: 128 VVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYL 187
Query: 85 RDNLAANSEQLVMR-----WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PV 138
RDN+A + E+ V R ++DE + LI G P S E K V + P
Sbjct: 188 RDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISG--PAEDSSEMYKRVNKIIPH 245
Query: 139 AA---KVAELLVQGL-HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----PWARF 190
K QG H++V+ K+ V LTE G+ L E L + DE + P
Sbjct: 246 LIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIM 305
Query: 191 VMN----ALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKI 246
+M+ AL+A + RDV YIV++G+ +I++E TGR + RRWS+G+HQAVEAKEG++I
Sbjct: 306 LMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQI 365
Query: 247 QADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPI 306
Q ++ +A IT+Q+ F+LY KL+GMTGTA TE EF ++++ + VPTN P IR DLP
Sbjct: 366 QNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPD 425
Query: 307 QSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKY 366
+ T K + ++++ G+PVLVG+ S+E SE +S+ L + GI HNVLNA K+
Sbjct: 426 LVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNA--KF 483
Query: 367 AAREAETVAQAGRKYAITISTNMAGRGTDIILGGN 401
A EA VAQAG A+TI+TNMAGRGTDI+LGG+
Sbjct: 484 HANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGS 518
Score = 248 (92.4 bits), Expect = 9.1e-118, Sum P(4) = 9.1e-118
Identities = 58/163 (35%), Positives = 86/163 (52%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V GGLH+IGT HESRRIDNQLRGR+GRQGD GS+RF +S++D + + F+ D
Sbjct: 548 VLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDR--VSG 605
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ IE + + + Q E F IRK L+E+D+V QR+ +Y R
Sbjct: 606 MMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNE 665
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+L ++ S+ I + V I + P W + L
Sbjct: 666 LLDVSD--VSETINSIREDVFKATIDAYIPPQSLEEMWDIPGL 706
Score = 128 (50.1 bits), Expect = 9.1e-118, Sum P(4) = 9.1e-118
Identities = 32/109 (29%), Positives = 60/109 (55%)
Query: 785 LGDILIASYLNVVQESRYDDVY----MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR 840
L + ++A + V Q R ++V M+ E+ V+++TLD W++HL M+ L +++R
Sbjct: 735 LRERILAQSIEVYQ--RKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLR 792
Query: 841 SFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSPMESQEL 887
+ ++P +EYK + F +ML + + + +L VQ P E +EL
Sbjct: 793 GYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQV-RMPEEVEEL 840
Score = 87 (35.7 bits), Expect = 9.1e-118, Sum P(4) = 9.1e-118
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ++GG VL++ IAEM+T
Sbjct: 81 MRHFDVQLLGGMVLNERCIAEMRT 104
>TIGR_CMR|SO_4211 [details] [associations]
symbol:SO_4211 "preprotein translocase, SecA subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 RefSeq:NP_719739.1
ProteinModelPortal:Q8E9Q5 SMR:Q8E9Q5 PRIDE:Q8E9Q5 GeneID:1171815
KEGG:son:SO_4211 PATRIC:23528060 ProtClustDB:PRK13107
Uniprot:Q8E9Q5
Length = 908
Score = 709 (254.6 bits), Expect = 5.5e-116, Sum P(4) = 5.5e-116
Identities = 168/398 (42%), Positives = 238/398 (59%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
V+TVNDYLA+RDAE + FLGL+VG+ G+ ++++ Y DITY N+E GFDYL
Sbjct: 128 VITVNDYLARRDAENNRPLFEFLGLTVGINVAGLGQQDKKDAYNADITYGTNNEFGFDYL 187
Query: 85 RDNLAANSEQLVMR-----WPKPFHFAIVDEVDSVLIDEGR----NPLLIS-GEASKDVA 134
RDN+A + ++ V R ++DE + LI G + L I ++
Sbjct: 188 RDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKINTLIPNLI 247
Query: 135 RYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAE-------MALETNDLWDE-NDP 186
R E + +G YT++ K V TE G E M E + L+ N
Sbjct: 248 RQDKEDS-EEYVGEG-DYTIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYSAANIS 305
Query: 187 WARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKI 246
V AL+A + RDV YIV++G+ +I++E TGR RRWSEG+HQAVEAKEG++I
Sbjct: 306 LLHHVNAALRAHTLFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVRI 365
Query: 247 QADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPI 306
Q ++ +A IT+Q+ F+LY KL+GMTGTA TE EF ++ + + VPTN P +R D+
Sbjct: 366 QNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVRKDMAD 425
Query: 307 QSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKY 366
+ TA K++ ++++ G+PVLVG+ S+E SE L+ L+ ++ IPH VLNA K+
Sbjct: 426 LVYLTANEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQVLNA--KF 483
Query: 367 AAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKM 404
+EAE VAQAGR A+TI+TNMAGRGTDI+LGGN M
Sbjct: 484 HEKEAEIVAQAGRTGAVTIATNMAGRGTDIVLGGNWNM 521
Score = 265 (98.3 bits), Expect = 5.5e-116, Sum P(4) = 5.5e-116
Identities = 61/159 (38%), Positives = 87/159 (54%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLH++GT HESRRIDNQLRGRAGRQGD GS+RF +S++D + + F+ D ++ +
Sbjct: 552 GGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFASDR--VSGMMKK 609
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +E IE + R + Q E F IRK L+EFD+V QR+ VY R ++
Sbjct: 610 LGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVYAQRNELMDA 669
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
ES + I V+ +I + P W + L
Sbjct: 670 --ESIADTIQNIQDDVISAVIDQYIPPQSVEELWDVPGL 706
Score = 129 (50.5 bits), Expect = 5.5e-116, Sum P(4) = 5.5e-116
Identities = 26/83 (31%), Positives = 50/83 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+++ E+AV+++TLD W++HL M+ L +++R + +NP +EYK + F +L+
Sbjct: 759 LRQFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLNTL 818
Query: 867 RR--LTVESLVQYWS-SPMESQE 886
+ ++V S VQ + S +E E
Sbjct: 819 KHDVISVLSKVQVQAQSDVEEME 841
Score = 85 (35.0 bits), Expect = 5.5e-116, Sum P(4) = 5.5e-116
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ++GG VL IAEM+T
Sbjct: 81 MRHFDVQLLGGMVLDSNRIAEMRT 104
Score = 41 (19.5 bits), Expect = 5.4e-31, Sum P(4) = 5.4e-31
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 345 YLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
YL+ L +G+ +V+ A R+AE +T+ N+AG G
Sbjct: 117 YLN-ALTGKGV--HVITVNDYLARRDAENNRPLFEFLGLTVGINVAGLG 162
>TIGR_CMR|CPS_4454 [details] [associations]
symbol:CPS_4454 "preprotein translocase, SecA subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 RefSeq:YP_271102.1
ProteinModelPortal:Q47VS0 SMR:Q47VS0 STRING:Q47VS0 GeneID:3522474
KEGG:cps:CPS_4454 PATRIC:21471745
BioCyc:CPSY167879:GI48-4463-MONOMER Uniprot:Q47VS0
Length = 893
Score = 711 (255.3 bits), Expect = 1.9e-115, Sum P(4) = 1.9e-115
Identities = 165/395 (41%), Positives = 240/395 (60%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
V+TVNDYLA RDA+W + FLGL+VG GM +++++ Y+ DITY N+E GFDYL
Sbjct: 128 VITVNDYLATRDADWSRPLFEFLGLTVGCNVAGMTTQDKQAAYQSDITYGTNNEFGFDYL 187
Query: 85 RDNLAANSEQ-----LVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDV-ARYPV 138
RDN+ + ++ L ++DE + LI G+ S K + P
Sbjct: 188 RDNMVFSPQERSQKPLHFAIIDEVDSILIDEARTPLIISGQAE--DSSALYKIINTLVPT 245
Query: 139 AAKVAELLVQGLH----YTVELKNNSVELTEEG-IALAEMALET------NDLWDE-NDP 186
+ E +G +T++ K V LTE G I + E+ +E + L+ N
Sbjct: 246 LEQQEEEDKEGEESTGDFTIDEKAKQVYLTERGQIHIEEIMVEKELLTAGDTLFSAANIT 305
Query: 187 WARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKI 246
VM AL+A + +++DV YIV++ + +I++E TGR E RRWSEG+HQAVEAKEG+ I
Sbjct: 306 LLHHVMAALRAHKLFQKDVDYIVKDDEIVIVDEHTGRTMEGRRWSEGLHQAVEAKEGVNI 365
Query: 247 QADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPI 306
Q ++ +A IT+Q+ F++Y KLSGMTGTA TE EF ++ + + +PTN P +R DL
Sbjct: 366 QNENQTLASITFQNYFRIYEKLSGMTGTADTEAFEFNHIYGLETVIIPTNQPMVRKDLSD 425
Query: 307 QSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKY 366
+ T K+E +++ + G+PVLVG+ ++E SE+LSD LK+ I H VLNA K+
Sbjct: 426 LIYLTTEEKFEAILADIQDCVKRGQPVLVGTIAIETSEFLSDFLKKAKIKHKVLNA--KF 483
Query: 367 AAREAETVAQAGRKYAITISTNMAGRGTDIILGGN 401
+EAE VA AG++ A+TI+TNMAGRGTDI+LGGN
Sbjct: 484 HQQEAEIVADAGKENAVTIATNMAGRGTDIVLGGN 518
Score = 261 (96.9 bits), Expect = 1.9e-115, Sum P(4) = 1.9e-115
Identities = 63/164 (38%), Positives = 99/164 (60%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V LGGLH++ T HESRRIDNQLRGR+GRQGD GSTRF +S++D + + F+ + +
Sbjct: 548 VLELGGLHIVATERHESRRIDNQLRGRSGRQGDEGSTRFYLSMEDSLMRIFASER--ISN 605
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ ++ IE + R + Q E F +RK L+E+D+V QR +Y+ R
Sbjct: 606 MMRKLGMEKGEAIEHPWVTRSIENAQRKVEGRNFDMRKQLLEYDDVANDQRGVIYEQRNE 665
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKL 693
+L NE +I ++A+ ++I G +D +H PR SLD++
Sbjct: 666 LLD--NE----EIGSVVEAIRSDVINGVID--QHIPRQ-SLDEM 700
Score = 114 (45.2 bits), Expect = 1.9e-115, Sum P(4) = 1.9e-115
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
DV +++ E+AV++++LD W++HL M+ L + +R+ +NP +E+K + F ML
Sbjct: 757 DV-LRQFEKAVMLQSLDSHWKEHLSAMDHLRQGIGLRAHAQKNPKQEFKRESFELFTEML 815
Score = 97 (39.2 bits), Expect = 1.9e-115, Sum P(4) = 1.9e-115
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ+IGG VL++G IAEM+T
Sbjct: 81 MRHFDVQMIGGMVLNEGKIAEMRT 104
Score = 38 (18.4 bits), Expect = 5.6e-30, Sum P(4) = 5.6e-30
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 345 YLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
YL+ L +G+ +V+ A R+A+ +T+ N+AG T
Sbjct: 117 YLN-ALTDKGV--HVITVNDYLATRDADWSRPLFEFLGLTVGCNVAGMTT 163
>TIGR_CMR|ECH_1149 [details] [associations]
symbol:ECH_1149 "preprotein translocase, SecA subunit"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
RefSeq:YP_507933.1 ProteinModelPortal:Q2GF50 SMR:Q2GF50
STRING:Q2GF50 GeneID:3927909 KEGG:ech:ECH_1149 PATRIC:20577624
BioCyc:ECHA205920:GJNR-1152-MONOMER Uniprot:Q2GF50
Length = 862
Score = 832 (297.9 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 181/416 (43%), Positives = 268/416 (64%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
+VTVNDYLA+RDAEWM ++ LG++VG I ER++ Y CDI Y+ N+ LGFDYL
Sbjct: 127 IVTVNDYLAKRDAEWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNNLGFDYL 186
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYP-VAAKVA 143
RDN+ + +++V R F++AIVDEVDS+LIDE R PL+ISG+ +D+ Y + +
Sbjct: 187 RDNMKFSRDEMVQRG---FNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDNLIY 243
Query: 144 ELLVQGLHYTVELKNNSVELTEEGIALAE-MALETN------DLWD-ENDPWARFVMNAL 195
EL + Y +E KN ++ LTE GI E + ++ N L+D +N ++ AL
Sbjct: 244 ELAEED--YELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQAL 301
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
+A + + D YI+++G +II+E TGR+ + RR+S+G+HQA+EAKE L I +++ +A
Sbjct: 302 RAHKMFAVDKDYIIKDGNIVIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLAS 361
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
T+Q+ F++Y KLSGMTGTA+TE +EFL ++ + V+++PTN+P R+DL + T K
Sbjct: 362 TTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIPTNIPVQRIDLNDDIYCTEEEK 421
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ + + + +PVLVG+ S+E SE LS LL + + H+VLNAR Y +EA +A
Sbjct: 422 FNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNAR--YHEQEAYIIA 479
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRXXXXXTREALNVEVDDKT 431
QAG ITI+TNMAGRGTDI LGGN KMLAK + + +EA+ ++ T
Sbjct: 480 QAGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALAN----ITDKEAIEIKYKQLT 531
Score = 268 (99.4 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 79/209 (37%), Positives = 115/209 (55%)
Query: 526 NEGSEVK-RLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFD 584
N E+ + GGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+D++ + F D
Sbjct: 535 NRDKEIAIQAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSD 594
Query: 585 TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHV 644
V + ++ +D I+ I R + Q E + IRKSL++FD V+ QRK V
Sbjct: 595 KIKGV--LQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLKFDNVINEQRKVV 652
Query: 645 YDLRQSILTGANESCSQQIFQYMQA-VVDEIIFGNVDPLKHPRYWSLDK-----LLKEFI 698
+D R IL + S I++ + + +V+ II H +Y++LD L EF
Sbjct: 653 FDQRNKILDSDSYDISI-IYRDLNSDIVNSII--------HDKYYNLDDDTYKALSSEFT 703
Query: 699 AIAGKILDDLFAGISG-DTLLKSIEELPE 726
I LD ++ IS ++ K +E L E
Sbjct: 704 RIYNITLD--YSTISNFESKDKVLEHLNE 730
Score = 119 (46.9 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 41/151 (27%), Positives = 71/151 (47%)
Query: 726 ELNSIDINNFYFPDLPKPPNLFRGIRRK-SSSLKRWLAICSDDLTKNGRYRATTNLLRKY 784
+LNS DI N D K NL + SS R I D T + + + +L ++
Sbjct: 673 DLNS-DIVNSIIHD--KYYNLDDDTYKALSSEFTRIYNITLDYSTISN-FESKDKVL-EH 727
Query: 785 LGDILIASYLNVVQE-SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
L + + + ++E + D V + V++ +LD WRDHL ++ L +N+RS
Sbjct: 728 LNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCGINLRSIA 787
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
++PL E+K + +M+S L ++ L
Sbjct: 788 QKDPLNEFKAEAFSMLENMMSKFYELIIQRL 818
Score = 102 (41.0 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 52/182 (28%), Positives = 78/182 (42%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT------VVTVNDYLAQRDAEWME--RVHRFLGLSVG 52
MRHFDVQ+IGG VLH G I+EMKT V T+ YL + + + V+ +L
Sbjct: 80 MRHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLAKR-D 138
Query: 53 LIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVD 112
G + C +T TN+ E Y D L + + L + + DE
Sbjct: 139 AEWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNNLGFDYLRDNMKFSRDE-- 196
Query: 113 SVLIDEGRNPLLISGEASK--DVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIAL 170
++ G N ++ S D AR P+ ++ + Q + ++ N EL EE L
Sbjct: 197 --MVQRGFNYAIVDEVDSILIDEARTPLI--ISGQVDQDIKMYKKIDNLIYELAEEDYEL 252
Query: 171 AE 172
E
Sbjct: 253 EE 254
Score = 50 (22.7 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 26/113 (23%), Positives = 46/113 (40%)
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP--LKHPRYW---- 688
+ L + +Y++ T +N ++ +++ VDE ++ LK + W
Sbjct: 696 KALSSEFTRIYNITLDYSTISNFESKDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVV 755
Query: 689 ------SLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNF 735
SLD L ++ +A LD L GI+ L+SI + LN F
Sbjct: 756 KKVMIMSLDYLWRDHLAA----LDSLKCGIN----LRSIAQKDPLNEFKAEAF 800
>UNIPROTKB|Q3S2Y3 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA"
species:1311 "Streptococcus agalactiae" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR022490 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0065002
EMBL:DQ174691 GO:GO:0017038 GO:GO:0015450 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 PROSITE:PS51196 IntAct:Q3S2Y3 TIGRFAMs:TIGR03714
Uniprot:Q3S2Y3
Length = 798
Score = 695 (249.7 bits), Expect = 2.6e-99, Sum P(4) = 2.6e-99
Identities = 155/381 (40%), Positives = 230/381 (60%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEE----RRSNYRCDITYTNNSELG 80
+VT NDYLA+RDA M +V++FLG++VG+ E +R Y DITYT LG
Sbjct: 128 LVTTNDYLAKRDALEMGKVYQFLGMTVGINVFDKKEEADATIKREVYESDITYTTAGALG 187
Query: 81 FDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA 140
FDYL NLA+N + +R PFHF IVDE DSVL+D + PL+I+G+ Y +
Sbjct: 188 FDYLVHNLASNKLEQFLR---PFHFVIVDEADSVLLDIAQTPLIIAGDPRVQSNLYGITN 244
Query: 141 KVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWA--RFVMNALKAK 198
L + Y + K+ V LTE+G++ A+ ++L+++ + W R + AL+A
Sbjct: 245 NFVLTLKENDEYIHKAKDKIVYLTEKGVSYAKQYFNISELYND-EYWELNRHINLALRAH 303
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y+RD Y+V+N + +++ TGRV E + GIHQA+EAKE + + +S +A ITY
Sbjct: 304 CLYKRDYDYVVKNNEVKLLDNATGRVMEGTKLQSGIHQAIEAKEDVALTNESRAIASITY 363
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
QSLF ++P+LSGMTGT K+ E E +K + +PVI +PTN P RVDL + + + K +
Sbjct: 364 QSLFNMFPRLSGMTGTGKSSEDELIKTYHLPVIVIPTNFPIKRVDLADKIYVSLPEKLQA 423
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+V+ G+PVL+ S +VE + S LL ++GI HN L A +EA+ + +AG
Sbjct: 424 TIDDVKQRHSKGQPVLLISGTVEIANIYSKLLLREGIAHNTLTA--DNVVKEAQIIKEAG 481
Query: 379 RKYAITISTNMAGRGTDIILG 399
+K ++T +T +AGRGTDI LG
Sbjct: 482 QKGSVTCATVLAGRGTDIKLG 502
Score = 200 (75.5 bits), Expect = 2.6e-99, Sum P(4) = 2.6e-99
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT + R+D QLRGR+GRQGDPG ++F VSL+DE+ S W
Sbjct: 502 GEGVRELGGLAVIGTERMPNLRMDWQLRGRSGRQGDPGISQFYVSLEDELI--VSHSPEW 559
Query: 588 AVDLISRITNDED-----MPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ + + + E +P + + + Q+ +E R+ ++F E L +QR+
Sbjct: 560 VIKYLKKYSRKETSNYYMVPRKKRFFYQIVKNAQLRSEDKGVSSREQTIKFGESLRIQRE 619
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
++Y LR ++ ++ + + +Q ++I + D +H SL + + E +
Sbjct: 620 NIYQLRNELIADSS-IVVDGVIKIIQDNFNDIA-NDKDLTEH----SLRRYILENLTYKF 673
Query: 703 KILDDLFAGISGDTLLKSIEEL 724
K D F + D + K + ++
Sbjct: 674 KYFPDEFDVHNSDDVFKLLIDI 695
Score = 70 (29.7 bits), Expect = 2.6e-99, Sum P(4) = 2.6e-99
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT 24
+D Q++G LH G+IAEMKT
Sbjct: 84 YDAQVMGAIALHQGTIAEMKT 104
Score = 64 (27.6 bits), Expect = 2.6e-99, Sum P(4) = 2.6e-99
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R ++K +D W + + ++ +L V R G R+ ++EY + + M R V
Sbjct: 718 RISILKAIDKSWIEEVDSLQQLKGVVTNRGIGQRDIIQEYYKESLNSYYKMGKEIRYSIV 777
Query: 872 ESLV 875
++++
Sbjct: 778 KNIM 781
>UNIPROTKB|Q7WUF6 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA"
species:1318 "Streptococcus parasanguinis" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR022490 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0065002
EMBL:DQ990875 GO:GO:0017038 GO:GO:0015450 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
TIGRFAMs:TIGR03714 EMBL:AY338765 IntAct:Q7WUF6 Uniprot:Q7WUF6
Length = 798
Score = 653 (234.9 bits), Expect = 7.1e-94, Sum P(4) = 7.1e-94
Identities = 154/383 (40%), Positives = 224/383 (58%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIP--EERRSN-----YRCDITYTNNS 77
+VT NDYLA+RDA M V+RF+GL+VG+ G+ EE SN Y DI YT ++
Sbjct: 126 LVTTNDYLARRDAIDMGEVYRFMGLTVGV---GVFDDDEEVDSNRKKKIYSSDILYTTST 182
Query: 78 ELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYP 137
LGFDYL DNLA N E +R F++ IVDE D+VL+D + PL+I+G Y
Sbjct: 183 ALGFDYLIDNLAGNVEDKFLR---SFNYVIVDEADAVLLDSAQTPLIIAGSPRVQSNLYD 239
Query: 138 VAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALK 196
A + L + + + LT+EGI AE +L+ E R + AL+
Sbjct: 240 TADQFIRTLKKDQEFKFLKDEKFIFLTDEGIRYAEKYFNIPNLYSEEYFELNRHINLALR 299
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A +++D+ Y+V + +++ TGR+ E R GIHQA+E KE +K DS +A +
Sbjct: 300 AHYLFKKDMDYVVTDDAVELLDNRTGRILEGTRLQSGIHQAIETKEKVKKSKDSRAIASV 359
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
TYQSLF ++PKLSGMTGT K E E + + + V+ +PTN P R+D + + T K
Sbjct: 360 TYQSLFNMFPKLSGMTGTGKIAENELISTYGVSVVVLPTNTPIQRLDYSDKIYTTLPEKL 419
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+ V+ + +P+L+ S +V+ +E S +L Q+GIPHNVL A K A+EA +A+
Sbjct: 420 LATLEFVKELHEKQQPILLISGTVDIAEIYSRMLLQEGIPHNVLTA--KNIAKEALIIAE 477
Query: 377 AGRKYAITISTNMAGRGTDIILG 399
AG+K A+T++T++AGRGTDI LG
Sbjct: 478 AGQKGAVTVATSLAGRGTDIKLG 500
Score = 189 (71.6 bits), Expect = 7.1e-94, Sum P(4) = 7.1e-94
Identities = 49/134 (36%), Positives = 71/134 (52%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS----- 582
G V LGGL VIGT + RID QLRGRAGRQGDPG ++F VSL+D++ +
Sbjct: 500 GKGVAELGGLAVIGTERMPNSRIDWQLRGRAGRQGDPGLSQFFVSLEDDLIMNHANRRLK 559
Query: 583 --FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F+ ++D + P+ R + Q +E R++ ++FDE L+ Q
Sbjct: 560 KYFEKQNSID-----RKNYGKPLFSKRFSRIVTHAQQKSEDKSESARQNTIKFDESLKSQ 614
Query: 641 RKHVYDLRQSILTG 654
RK +Y LR ++ G
Sbjct: 615 RKKIYHLRDQLIFG 628
Score = 76 (31.8 bits), Expect = 7.1e-94, Sum P(4) = 7.1e-94
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT 24
FDVQ++G LH+G+I EMKT
Sbjct: 82 FDVQVLGALALHEGTIVEMKT 102
Score = 59 (25.8 bits), Expect = 7.1e-94, Sum P(4) = 7.1e-94
Identities = 18/92 (19%), Positives = 43/92 (46%)
Query: 787 DILIASY-LNVVQESRY--DDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
D L Y L + ++S+ D ++E R +++ +D W + ++ +L + V++R
Sbjct: 690 DYLFYLYQLEMERKSKQLKTDSKVEEFIRLSILRAIDECWIQQVDHLQQLKTFVSMRQIA 749
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
R+ EY + + M + V++++
Sbjct: 750 QRDSFNEYLRESLESYEEMSREVKHAIVKNVM 781
>UNIPROTKB|Q9KPH4 [details] [associations]
symbol:secA "Protein translocase subunit SecA"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009306 "protein secretion" evidence=ISS] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0009306 GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 HSSP:P43803
PIR:F82080 RefSeq:NP_232024.1 ProteinModelPortal:Q9KPH4 SMR:Q9KPH4
DNASU:2613063 GeneID:2613063 KEGG:vch:VC2394 PATRIC:20083809
Uniprot:Q9KPH4
Length = 903
Score = 559 (201.8 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 121/268 (45%), Positives = 174/268 (64%)
Query: 151 HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P----WARFVMNALKAKEFYR 202
H+TV+ K+ V LTE G E L N + E D P V AL+A +
Sbjct: 262 HFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLLHHVNAALRAHVLFE 321
Query: 203 RDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
++V YIV +G+ +I++E TGR RRWS+G+HQAVEAKEG+KIQ ++ +A IT+Q+
Sbjct: 322 KNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNENQTLASITFQNY 381
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KLSGMTGTA TE EF +++ + + +PTN P +R D+P + + K+ +
Sbjct: 382 FRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDVVYRSEAEKFAAIIE 441
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
+++ G+PVLVG+ S+E SE LS+ LK+ GI HNVLNA K+ +EAE VA+AG+
Sbjct: 442 DIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLNA--KFHEKEAEIVAEAGKPG 499
Query: 382 AITISTNMAGRGTDIILGGNPKMLAKKI 409
A+TI+TNMAGRGTDI+LGG+ + +K+
Sbjct: 500 AVTIATNMAGRGTDIVLGGSWQAKVEKL 527
Score = 301 (111.0 bits), Expect = 1.5e-61, Sum P(4) = 1.5e-61
Identities = 85/212 (40%), Positives = 111/212 (52%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
+VTVNDYLA+RDAE + FLG++VG+ M ++ Y+ DI Y N+E GFDYL
Sbjct: 128 IVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFDYL 187
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+A E V R F FA+VDEVDS+LIDE R PL+ISG A Y K+
Sbjct: 188 RDNMAFRPEDRVQR--ARF-FAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIP 244
Query: 145 LL----------VQGL-HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P--- 186
LL +G H+TV+ K+ V LTE G E L N + E D P
Sbjct: 245 LLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANI 304
Query: 187 -WARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V AL+A + ++V YIV ++I
Sbjct: 305 SLLHHVNAALRAHVLFEKNVDYIVTPDGEVVI 336
Score = 279 (103.3 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 67/172 (38%), Positives = 100/172 (58%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V + GGLH+IGT HESRRIDNQLRGR+GRQGD GS+RF +S++D + + F+ D A+
Sbjct: 548 QVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFTSDRMAAL 607
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ S + DE IE + R + Q E F IRK L+E+D+V QRK VY+LR
Sbjct: 608 -IQSGM--DEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYELRD 664
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 697
+++ + S I Q + V++ ++ + P W + D+L +F
Sbjct: 665 ELMSA--DDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDF 714
Score = 130 (50.8 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 776 ATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRL 833
A L + L + +I + V +E M+ E++V+++TLD W++HL M+ L
Sbjct: 726 ADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHLAAMDHL 785
Query: 834 SSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR--LTVESLVQ 876
+++R + +NP +EYK + F +L + + +TV S V+
Sbjct: 786 RQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVR 830
Score = 102 (41.0 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ+IGG VLH G IAEM+T
Sbjct: 81 MRHFDVQLIGGMVLHGGQIAEMRT 104
Score = 44 (20.5 bits), Expect = 3.9e-28, Sum P(3) = 3.9e-28
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 297 LPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIP 356
+ ++R + ++ +A K EY R+ E +F L+ S + LS + QQ
Sbjct: 782 MDHLRQGIHLRGYAQKNPKQEYKRESFE-LFE----DLLESLKSDVITVLSKVRVQQQEE 836
Query: 357 HNVLNARPKYAAREAETVAQA 377
+ A+ + A EA AQA
Sbjct: 837 VERMEAQRRAQAEEAARHAQA 857
>TIGR_CMR|VC_2394 [details] [associations]
symbol:VC_2394 "preprotein translocase, SecA subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009306
GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 HSSP:P43803
PIR:F82080 RefSeq:NP_232024.1 ProteinModelPortal:Q9KPH4 SMR:Q9KPH4
DNASU:2613063 GeneID:2613063 KEGG:vch:VC2394 PATRIC:20083809
Uniprot:Q9KPH4
Length = 903
Score = 559 (201.8 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 121/268 (45%), Positives = 174/268 (64%)
Query: 151 HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P----WARFVMNALKAKEFYR 202
H+TV+ K+ V LTE G E L N + E D P V AL+A +
Sbjct: 262 HFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLLHHVNAALRAHVLFE 321
Query: 203 RDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
++V YIV +G+ +I++E TGR RRWS+G+HQAVEAKEG+KIQ ++ +A IT+Q+
Sbjct: 322 KNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNENQTLASITFQNY 381
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KLSGMTGTA TE EF +++ + + +PTN P +R D+P + + K+ +
Sbjct: 382 FRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDVVYRSEAEKFAAIIE 441
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
+++ G+PVLVG+ S+E SE LS+ LK+ GI HNVLNA K+ +EAE VA+AG+
Sbjct: 442 DIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLNA--KFHEKEAEIVAEAGKPG 499
Query: 382 AITISTNMAGRGTDIILGGNPKMLAKKI 409
A+TI+TNMAGRGTDI+LGG+ + +K+
Sbjct: 500 AVTIATNMAGRGTDIVLGGSWQAKVEKL 527
Score = 301 (111.0 bits), Expect = 1.5e-61, Sum P(4) = 1.5e-61
Identities = 85/212 (40%), Positives = 111/212 (52%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
+VTVNDYLA+RDAE + FLG++VG+ M ++ Y+ DI Y N+E GFDYL
Sbjct: 128 IVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFDYL 187
Query: 85 RDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAE 144
RDN+A E V R F FA+VDEVDS+LIDE R PL+ISG A Y K+
Sbjct: 188 RDNMAFRPEDRVQR--ARF-FAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIP 244
Query: 145 LL----------VQGL-HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P--- 186
LL +G H+TV+ K+ V LTE G E L N + E D P
Sbjct: 245 LLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANI 304
Query: 187 -WARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V AL+A + ++V YIV ++I
Sbjct: 305 SLLHHVNAALRAHVLFEKNVDYIVTPDGEVVI 336
Score = 279 (103.3 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 67/172 (38%), Positives = 100/172 (58%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V + GGLH+IGT HESRRIDNQLRGR+GRQGD GS+RF +S++D + + F+ D A+
Sbjct: 548 QVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFTSDRMAAL 607
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ S + DE IE + R + Q E F IRK L+E+D+V QRK VY+LR
Sbjct: 608 -IQSGM--DEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYELRD 664
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 697
+++ + S I Q + V++ ++ + P W + D+L +F
Sbjct: 665 ELMSA--DDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDF 714
Score = 130 (50.8 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 776 ATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRL 833
A L + L + +I + V +E M+ E++V+++TLD W++HL M+ L
Sbjct: 726 ADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHLAAMDHL 785
Query: 834 SSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR--LTVESLVQ 876
+++R + +NP +EYK + F +L + + +TV S V+
Sbjct: 786 RQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVR 830
Score = 102 (41.0 bits), Expect = 4.9e-93, Sum P(4) = 4.9e-93
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
MRHFDVQ+IGG VLH G IAEM+T
Sbjct: 81 MRHFDVQLIGGMVLHGGQIAEMRT 104
Score = 44 (20.5 bits), Expect = 3.9e-28, Sum P(3) = 3.9e-28
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 297 LPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIP 356
+ ++R + ++ +A K EY R+ E +F L+ S + LS + QQ
Sbjct: 782 MDHLRQGIHLRGYAQKNPKQEYKRESFE-LFE----DLLESLKSDVITVLSKVRVQQQEE 836
Query: 357 HNVLNARPKYAAREAETVAQA 377
+ A+ + A EA AQA
Sbjct: 837 VERMEAQRRAQAEEAARHAQA 857
>UNIPROTKB|P66785 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA 2"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0043952 "protein transport by
the Sec complex" evidence=IMP] [GO:0044119 "growth of symbiont in
host cell" evidence=IMP] [GO:0051701 "interaction with host"
evidence=TAS] [GO:0052059 "evasion or tolerance by symbiont of
host-produced reactive oxygen species" evidence=TAS] [GO:0052553
"modulation by symbiont of host immune response" evidence=IMP]
[GO:0052572 "response to host immune response" evidence=TAS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005618 GO:GO:0006605
Reactome:REACT_116125 GO:GO:0009405 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0044119
GO:GO:0016887 EMBL:BX842577 GO:GO:0052059 GO:GO:0052553
TCDB:3.A.5.2.2 GO:GO:0017038 eggNOG:COG0653 KO:K03070
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR014018
SUPFAM:SSF81767 SUPFAM:SSF81886 PROSITE:PS51196
HOGENOM:HOG000218168 GO:GO:0043952 PIR:F70720 RefSeq:NP_216337.1
RefSeq:NP_336328.1 RefSeq:YP_006515221.1 ProteinModelPortal:P66785
SMR:P66785 PRIDE:P66785 EnsemblBacteria:EBMYCT00000003802
EnsemblBacteria:EBMYCT00000069126 GeneID:13316612 GeneID:885594
GeneID:923751 KEGG:mtc:MT1869 KEGG:mtu:Rv1821 KEGG:mtv:RVBD_1821
PATRIC:18125881 TubercuList:Rv1821 OMA:HRNTWRY ProtClustDB:PRK12326
InterPro:IPR026389 TIGRFAMs:TIGR04221 Uniprot:P66785
Length = 808
Score = 670 (240.9 bits), Expect = 1.0e-92, Sum P(4) = 1.0e-92
Identities = 160/410 (39%), Positives = 233/410 (56%)
Query: 9 IGGAVLHDG-SIAEMKT-VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSN 66
+ GA+ G ++A VVT+NDYLA+RDAEWM + +GL+VG I P+ERR+
Sbjct: 147 LAGAIAAAGYALAGRHVHVVTINDYLARRDAEWMGPLLDAMGLTVGWITADSTPDERRTA 206
Query: 67 YRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLIS 126
Y D+TY + +E+GFD LRD L + LV P P A++DE DSVL+DE PL+++
Sbjct: 207 YDRDVTYASVNEIGFDVLRDQLVTDVNDLVS--PNP-DVALIDEADSVLVDEALVPLVLA 263
Query: 127 GEASKDVARYPVAAKVAELLVQ---GLHYTVELKNNSVELTEEGIALAEMALETNDLWDE 183
G ++ R + VAEL+ ++ + N +V LTE G E AL DL+ E
Sbjct: 264 GTTHRETPRLEIIRLVAELVGDKDADEYFATDSDNRNVHLTEHGARKVEKALGGIDLYSE 323
Query: 184 NDPWARFV-MN-ALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAK 241
+N AL A +RDV YIVR+ +IN GR+ + +RW +G+ AVEAK
Sbjct: 324 EHVGTTLTEVNVALHAHVLLQRDVHYIVRDDAVHLINASRGRIAQLQRWPDGLQAAVEAK 383
Query: 242 EGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIR 301
EG++ V+ IT Q+L Y + GMTGTA ++ + +Q+ V +P N PNIR
Sbjct: 384 EGIETTETGEVLDTITVQALINRYATVCGMTGTALAAGEQLRQFYQLGVSPIPPNKPNIR 443
Query: 302 VDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLN 361
D + + T K + + + + + G+PVLVG+ V SE L + L ++G+P VLN
Sbjct: 444 EDEADRVYITTAAKNDGIVEHITEVHQRGQPVLVGTRDVAESEELHERLVRRGVPAVVLN 503
Query: 362 ARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIE 411
A K A EA +A+AG+ A+T+ST MAGRGTDI LGG+ + ++ E
Sbjct: 504 A--KNDAEEARVIAEAGKYGAVTVSTQMAGRGTDIRLGGSDEADHDRVAE 551
Score = 164 (62.8 bits), Expect = 1.0e-92, Sum P(4) = 1.0e-92
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
V LGGLHV+GT H + R+DNQLRGRAGRQGDPGS+ F S +D++
Sbjct: 549 VAELGGLHVVGTGRHHTERLDNQLRGRAGRQGDPGSSVFFSSWEDDV 595
Score = 81 (33.6 bits), Expect = 1.0e-92, Sum P(4) = 1.0e-92
Identities = 13/45 (28%), Positives = 29/45 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEY 851
++ + R +++ LD W DHL + + ++++R+ G +NPL+E+
Sbjct: 693 LETICRQIMLYHLDRGWADHLAYLADIRESIHLRALGRQNPLDEF 737
Score = 51 (23.0 bits), Expect = 1.0e-92, Sum P(4) = 1.0e-92
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT 24
+R FDVQ++G + G + EM T
Sbjct: 118 LRPFDVQLLGALRMLAGDVIEMAT 141
>UNIPROTKB|Q5LPY3 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312
SMART:SM00957 SMART:SM00958 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0006605 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0017038 eggNOG:COG0653 KO:K03070 Gene3D:3.90.1440.10
InterPro:IPR014018 SUPFAM:SSF81767 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_167923.1 HSSP:P0A5Y8
ProteinModelPortal:Q5LPY3 GeneID:3194324 KEGG:sil:SPO2713
PATRIC:23378841 OMA:RASTHLT ProtClustDB:PRK12898 Uniprot:Q5LPY3
Length = 652
Score = 664 (238.8 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 155/390 (39%), Positives = 220/390 (56%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
V+T NDYLA RDA+ M ++ LGL+ ++ G PEERR+ + DI Y + E+ F +L
Sbjct: 155 VITANDYLAGRDADTMRGLYARLGLTCAAVEPGCTPEERRAAFAADIVYASGKEVAFTFL 214
Query: 85 RDNLAANSE--QLVMRWPKPF----------HFAIVDEVDSVLIDEGRNPLLIS---GEA 129
RD +A + +R F FAIVDE+DSV+IDE R PL++S +A
Sbjct: 215 RDRVAMGGRAGDIGLRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEARTPLILSVPPADA 274
Query: 130 SKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGI-ALAEMALETNDLWDENDPWA 188
+ A +A L +G Y ++ ++VEL+ G LA++A W
Sbjct: 275 EVEAEAARAAHAIAAELKEGRDYRLDRLRHAVELSRNGCDRLADLAERMPPAWRPAPIRE 334
Query: 189 RFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQA 248
V A+ A ++RD YI+R+GK I++E TGR+ R WS G+HQAVEAKEG++I +
Sbjct: 335 DAVRTAISAIRLHQRDEHYILRDGKVEIVDEFTGRIMPDRSWSAGLHQAVEAKEGVEITS 394
Query: 249 DSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQS 308
V +AQIT+Q F+ Y L GMTGTA EF ++ +PV+ +PT+ + R Q
Sbjct: 395 RRVTLAQITFQRFFRRYIHLGGMTGTATEAADEFWSVYDLPVVRIPTHKRSRRRTWKTQV 454
Query: 309 FATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAA 368
A KW + +++ GRPVL+G+ +V SE S L G+PH VL+A A
Sbjct: 455 STRAATKWARVAKRAKALSASGRPVLIGTRTVAASEAASAALHALGVPHRVLSAAQD--A 512
Query: 369 REAETVAQAGRKYAITISTNMAGRGTDIIL 398
EA VA+AGR A+T++TNMAGRGTDIIL
Sbjct: 513 DEAAVVAEAGRAGAVTVATNMAGRGTDIIL 542
Score = 183 (69.5 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 45/107 (42%), Positives = 60/107 (56%)
Query: 529 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWA 588
+E ++ GGLHVI T H SRRID QL GRAGRQGDPGST ++S +D + +F S
Sbjct: 544 AEARKAGGLHVIMTEKHSSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGRYS-- 601
Query: 589 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
S +T G A++ L Q AE+ + R+ L+E DE
Sbjct: 602 ----SFVTR-----FGGSAVLSALTDAQRRAERTHVAARRRLLELDE 639
Score = 59 (25.8 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT 24
RH+ QI+G + +G++AEM+T
Sbjct: 109 RHYATQILGARAVLNGAVAEMQT 131
Score = 51 (23.0 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 371 AETVAQAGRK-YAITISTNMAGRGTDIILG 399
A T A AGR+ + IT + +AGR D + G
Sbjct: 143 AGTAALAGRRVHVITANDYLAGRDADTMRG 172
Score = 43 (20.2 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN- 388
G +LV S ++ E L Q+ +L AR AE G+ AIT++
Sbjct: 87 GEALLVRSFALIR-ECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAITLAAGT 145
Query: 389 --MAGRGTDII 397
+AGR +I
Sbjct: 146 AALAGRRVHVI 156
>TIGR_CMR|SPO_2713 [details] [associations]
symbol:SPO_2713 "SecA DEAD domain protein/helicase,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 Gene3D:3.90.1440.10 InterPro:IPR014018
SUPFAM:SSF81767 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:YP_167923.1 HSSP:P0A5Y8 ProteinModelPortal:Q5LPY3
GeneID:3194324 KEGG:sil:SPO2713 PATRIC:23378841 OMA:RASTHLT
ProtClustDB:PRK12898 Uniprot:Q5LPY3
Length = 652
Score = 664 (238.8 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 155/390 (39%), Positives = 220/390 (56%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYL 84
V+T NDYLA RDA+ M ++ LGL+ ++ G PEERR+ + DI Y + E+ F +L
Sbjct: 155 VITANDYLAGRDADTMRGLYARLGLTCAAVEPGCTPEERRAAFAADIVYASGKEVAFTFL 214
Query: 85 RDNLAANSE--QLVMRWPKPF----------HFAIVDEVDSVLIDEGRNPLLIS---GEA 129
RD +A + +R F FAIVDE+DSV+IDE R PL++S +A
Sbjct: 215 RDRVAMGGRAGDIGLRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEARTPLILSVPPADA 274
Query: 130 SKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGI-ALAEMALETNDLWDENDPWA 188
+ A +A L +G Y ++ ++VEL+ G LA++A W
Sbjct: 275 EVEAEAARAAHAIAAELKEGRDYRLDRLRHAVELSRNGCDRLADLAERMPPAWRPAPIRE 334
Query: 189 RFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQA 248
V A+ A ++RD YI+R+GK I++E TGR+ R WS G+HQAVEAKEG++I +
Sbjct: 335 DAVRTAISAIRLHQRDEHYILRDGKVEIVDEFTGRIMPDRSWSAGLHQAVEAKEGVEITS 394
Query: 249 DSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQS 308
V +AQIT+Q F+ Y L GMTGTA EF ++ +PV+ +PT+ + R Q
Sbjct: 395 RRVTLAQITFQRFFRRYIHLGGMTGTATEAADEFWSVYDLPVVRIPTHKRSRRRTWKTQV 454
Query: 309 FATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAA 368
A KW + +++ GRPVL+G+ +V SE S L G+PH VL+A A
Sbjct: 455 STRAATKWARVAKRAKALSASGRPVLIGTRTVAASEAASAALHALGVPHRVLSAAQD--A 512
Query: 369 REAETVAQAGRKYAITISTNMAGRGTDIIL 398
EA VA+AGR A+T++TNMAGRGTDIIL
Sbjct: 513 DEAAVVAEAGRAGAVTVATNMAGRGTDIIL 542
Score = 183 (69.5 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 45/107 (42%), Positives = 60/107 (56%)
Query: 529 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWA 588
+E ++ GGLHVI T H SRRID QL GRAGRQGDPGST ++S +D + +F S
Sbjct: 544 AEARKAGGLHVIMTEKHSSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGRYS-- 601
Query: 589 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
S +T G A++ L Q AE+ + R+ L+E DE
Sbjct: 602 ----SFVTR-----FGGSAVLSALTDAQRRAERTHVAARRRLLELDE 639
Score = 59 (25.8 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT 24
RH+ QI+G + +G++AEM+T
Sbjct: 109 RHYATQILGARAVLNGAVAEMQT 131
Score = 51 (23.0 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 371 AETVAQAGRK-YAITISTNMAGRGTDIILG 399
A T A AGR+ + IT + +AGR D + G
Sbjct: 143 AGTAALAGRRVHVITANDYLAGRDADTMRG 172
Score = 43 (20.2 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN- 388
G +LV S ++ E L Q+ +L AR AE G+ AIT++
Sbjct: 87 GEALLVRSFALIR-ECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAITLAAGT 145
Query: 389 --MAGRGTDII 397
+AGR +I
Sbjct: 146 AALAGRRVHVI 156
>DICTYBASE|DDB_G0291406 [details] [associations]
symbol:DDB_G0291406 species:44689 "Dictyostelium
discoideum" [GO:0017038 "protein import" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011130 Pfam:PF00023 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS50088 SMART:SM00248 SMART:SM00957 dictyBase:DDB_G0291406
GO:GO:0005524 GO:GO:0006605 EMBL:AAFI02000177 GO:GO:0016020
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 GO:GO:0017038 eggNOG:COG0653
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
PROSITE:PS51196 RefSeq:XP_635190.1 ProteinModelPortal:Q54EQ0
EnsemblProtists:DDB0183872 GeneID:8628135 KEGG:ddi:DDB_G0291406
InParanoid:Q54EQ0 Uniprot:Q54EQ0
Length = 4135
Score = 237 (88.5 bits), Expect = 3.2e-22, Sum P(3) = 3.2e-22
Identities = 55/186 (29%), Positives = 98/186 (52%)
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
++ + TGR+ R+S+G+H+ +E K G + +S+ A I++ S F Y + G+TGT
Sbjct: 3667 IVDKDNTGRLMNGSRYSDGLHEFIEVKHGFQPNPESLTAAAISHPSFFAQYNVVFGLTGT 3726
Query: 275 A--KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
+E E ++ + VP+ P+ R+ P + ++T + E++ M L RP
Sbjct: 3727 CGEDSERSELSLVYDVDSFNVPSYQPSKRIKKPSKIYSTIQDYQNSIIDEIKEMQSLSRP 3786
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
+L+ ++ +SE + LL+ I +LN + E + +AG +T++TN AGR
Sbjct: 3787 ILLLVPTINDSEEFTQLLQSNSIKSQLLNEMQQQD--EEFIITKAGECGVVTVATNTAGR 3844
Query: 393 GTDIIL 398
GTDI L
Sbjct: 3845 GTDIKL 3850
Score = 100 (40.3 bits), Expect = 3.2e-22, Sum P(3) = 3.2e-22
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 25 VVTVNDYLAQRDAEWMERVHRFLGLSVGLI-QRGMIPEERRSNYRCDITYTNNSELGFDY 83
++T ++YLAQRD E + LG+S I + P+ + I + N+ F
Sbjct: 3426 IITTSEYLAQRDFIKFEGFFKSLGISCSHICYQHPTPQV----FNAQILFGTNTNFEFAL 3481
Query: 84 LRDNLAANSEQLVMR--WPKPFHFAIVDEVDSVLIDEGRNP--LLISGEASKDVARYPVA 139
L D L N +L+ P+ IVDEVDS+ +D N + IS P++
Sbjct: 3482 LGDKL--NDSKLLFTNGLPREKDLVIVDEVDSLFMDSALNSARMAISSNDYHGFIYQPIS 3539
Query: 140 AKVAELLVQ 148
V +VQ
Sbjct: 3540 NYVKTTIVQ 3548
Score = 80 (33.2 bits), Expect = 3.2e-22, Sum P(3) = 3.2e-22
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 529 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
+E GGLHVI + R++ Q GR+GRQG GS R +V
Sbjct: 3852 AEALENGGLHVIFAFYPANLRVECQGLGRSGRQGQNGSCRIIV 3894
Score = 42 (19.8 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 58 MIPEERRSNYRCDITYTNNSELGF 81
+ PE +RSN + ++N EL F
Sbjct: 2522 LTPETKRSNRWIKVVVSDNPELLF 2545
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 890 867 0.00084 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 630 (67 KB)
Total size of DFA: 413 KB (2200 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.20u 0.11s 74.31t Elapsed: 00:00:05
Total cpu time: 74.21u 0.11s 74.32t Elapsed: 00:00:05
Start: Mon May 20 23:17:01 2013 End: Mon May 20 23:17:06 2013