BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002707
(890 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302141769|emb|CBI18972.3| unnamed protein product [Vitis vinifera]
Length = 1067
Score = 1596 bits (4133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/913 (84%), Positives = 828/913 (90%), Gaps = 23/913 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 155 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 214
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EERRSNY CDITYTNNSELGFDYLRDNLA S QLVM
Sbjct: 215 EWMGRVHRFLGLSVGLIQRGMTSEERRSNYGCDITYTNNSELGFDYLRDNLAGTSGQLVM 274
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKD ARYPVAAK+AELL++GLHY VELK
Sbjct: 275 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKIAELLIRGLHYNVELK 334
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+NSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRR+VQYIVRNGKALII
Sbjct: 335 DNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRNVQYIVRNGKALII 394
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 395 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 454
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQMPVIEVP NLPNIR DLPIQ+FATARGKWE R+EVE MFR GRPVLVG+
Sbjct: 455 EEKEFLKMFQMPVIEVPPNLPNIRKDLPIQAFATARGKWENVREEVEYMFRQGRPVLVGT 514
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLSDLLK++ IPHNVLNARPKYAAREAE VAQAGRK+AITISTNMAGRGTDII
Sbjct: 515 TSVENSEYLSDLLKERKIPHNVLNARPKYAAREAEIVAQAGRKFAITISTNMAGRGTDII 574
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK++IED LL LT+EA NVEVD + +S KVLS+IK+GS+SLALLAK AL+A
Sbjct: 575 LGGNPKMLAKEVIEDSLLSFLTQEAPNVEVDGEPTSQKVLSKIKIGSASLALLAKTALMA 634
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYV K EGKSWTYQ+AKS SESVEMSQS++ KEL+KL ++QS MYPLGPT+AL YLSVL
Sbjct: 635 KYVSKGEGKSWTYQKAKSMISESVEMSQSIDWKELEKLANEQSEMYPLGPTIALAYLSVL 694
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 695 KDCEAHCLSEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 754
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGDAIV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 755 FQKFNFDTEWAVRLISKITNDEDIPIEGDAIVKQLLALQINAEKYFFGIRKSLVEFDEVL 814
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ ILTG ESCSQ +FQYMQAVVDEI+FGNV+ LKHP W+L KLLKEF
Sbjct: 815 EVQRKHVYDLRQLILTGDIESCSQHVFQYMQAVVDEIVFGNVNALKHPSKWNLGKLLKEF 874
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
I I+G++LDD F GIS +TLLK++ +L EL+S+DINNFY P+LP PPN FRGIRRK+SSL
Sbjct: 875 IGISGRLLDDSFVGISEETLLKALAQLHELSSVDINNFYLPNLPTPPNAFRGIRRKTSSL 934
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
KRWLAICSDD ++GRYRAT NLLRKYLGD LIASYL+ VQES YDD Y+KE+ERAVLVK
Sbjct: 935 KRWLAICSDDSARDGRYRATANLLRKYLGDFLIASYLDAVQESGYDDAYVKEIERAVLVK 994
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL++Y
Sbjct: 995 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLLRY 1054
Query: 878 WSSPMESQELFLS 890
WSSPMESQELF+S
Sbjct: 1055 WSSPMESQELFVS 1067
>gi|359492369|ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
Length = 1817
Score = 1589 bits (4114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/913 (84%), Positives = 828/913 (90%), Gaps = 23/913 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 905 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 964
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EERRSNY CDITYTNNSELGFDYLRDNLA S QLVM
Sbjct: 965 EWMGRVHRFLGLSVGLIQRGMTSEERRSNYGCDITYTNNSELGFDYLRDNLAGTSGQLVM 1024
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKD ARYPVAAK+AELL++GLHY VELK
Sbjct: 1025 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKIAELLIRGLHYNVELK 1084
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+NSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRR+VQYIVRNGKALII
Sbjct: 1085 DNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRNVQYIVRNGKALII 1144
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 1145 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 1204
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQMPVIEVP NLPNIR DLPIQ+FATARGKWE R+EVE MFR GRPVLVG+
Sbjct: 1205 EEKEFLKMFQMPVIEVPPNLPNIRKDLPIQAFATARGKWENVREEVEYMFRQGRPVLVGT 1264
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLSDLLK++ IPHNVLNARPKYAAREAE VAQAGRK+AITISTNMAGRGTDII
Sbjct: 1265 TSVENSEYLSDLLKERKIPHNVLNARPKYAAREAEIVAQAGRKFAITISTNMAGRGTDII 1324
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK++IED LL LT+EA NVEVD + +S KVLS+IK+GS+SLALLAK AL+A
Sbjct: 1325 LGGNPKMLAKEVIEDSLLSFLTQEAPNVEVDGEPTSQKVLSKIKIGSASLALLAKTALMA 1384
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYV K EGKSWTYQ+AKS SESVEMSQS++ KEL+KL ++QS MYPLGPT+AL YLSVL
Sbjct: 1385 KYVSKGEGKSWTYQKAKSMISESVEMSQSIDWKELEKLANEQSEMYPLGPTIALAYLSVL 1444
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 1445 KDCEAHCLSEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 1504
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGDAIV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 1505 FQKFNFDTEWAVRLISKITNDEDIPIEGDAIVKQLLALQINAEKYFFGIRKSLVEFDEVL 1564
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ ILTG ESCSQ +FQYMQAVVDEI+FGNV+ LKHP W+L KLLKEF
Sbjct: 1565 EVQRKHVYDLRQLILTGDIESCSQHVFQYMQAVVDEIVFGNVNALKHPSKWNLGKLLKEF 1624
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
I I+G++LDD F GIS +TLLK++ +L EL+S+DINNFY P+LP PPN FRGIRRK+SSL
Sbjct: 1625 IGISGRLLDDSFVGISEETLLKALAQLHELSSVDINNFYLPNLPTPPNAFRGIRRKTSSL 1684
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
KRWLAICSDD ++GRYRAT NLLRKYLGD LIASYL+ VQES YDD Y+KE+ERAVLVK
Sbjct: 1685 KRWLAICSDDSARDGRYRATANLLRKYLGDFLIASYLDAVQESGYDDAYVKEIERAVLVK 1744
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL++Y
Sbjct: 1745 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLLRY 1804
Query: 878 WSSPMESQELFLS 890
WSSPMESQELF+S
Sbjct: 1805 WSSPMESQELFVS 1817
>gi|224062991|ref|XP_002300961.1| predicted protein [Populus trichocarpa]
gi|222842687|gb|EEE80234.1| predicted protein [Populus trichocarpa]
Length = 1053
Score = 1578 bits (4087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/913 (83%), Positives = 820/913 (89%), Gaps = 27/913 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 145 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 204
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQ+GM +ERRSNYRCDITYTNNSELGFDYLRDNLA NSEQLVM
Sbjct: 205 EWMGRVHRFLGLSVGLIQKGMASKERRSNYRCDITYTNNSELGFDYLRDNLAGNSEQLVM 264
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+KD ARYPVAAKVAELL++G+HY+VELK
Sbjct: 265 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANKDAARYPVAAKVAELLIRGIHYSVELK 324
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+NSVELTEEGI LAEMALET DLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII
Sbjct: 325 DNSVELTEEGILLAEMALETKDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 384
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 385 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 444
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ+PVIEVPTNLPNIR DLPIQ+FA+ARGKWEY RQEVE MF+ GRPVLVG+
Sbjct: 445 EEKEFLKMFQVPVIEVPTNLPNIRKDLPIQAFASARGKWEYVRQEVEYMFKQGRPVLVGT 504
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLSDLLK+ IPHNVLNARPKYA REAE VAQAGRK+AITISTNMAGRGTDII
Sbjct: 505 TSVENSEYLSDLLKEWRIPHNVLNARPKYATREAEIVAQAGRKHAITISTNMAGRGTDII 564
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK+IIE+R+L LT+EALN E+D + S KVLSEIK+GS S ALLAK AL+A
Sbjct: 565 LGGNPKMLAKEIIENRVLPFLTQEALNAEIDHEIFSQKVLSEIKVGSISSALLAKTALMA 624
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYVGK EGKSWTYQEAK S+SVEMS SM+ KELQ+L ++QS MYPLGPT++L YLSVL
Sbjct: 625 KYVGKGEGKSWTYQEAKLIVSDSVEMSHSMDAKELQQLANEQSEMYPLGPTISLAYLSVL 684
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCEVHC NEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 685 KDCEVHCFNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 744
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDE +PIEGDAIV QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 745 FQKFNFDTEWAVRLISKITNDETIPIEGDAIVNQLLSLQINAEKYFFGIRKSLVEFDEVL 804
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ ILTG NESCSQ +FQYMQAVVDEI+FGN DPLKHPR W+L KLLKEF
Sbjct: 805 EVQRKHVYDLRQLILTGDNESCSQHVFQYMQAVVDEIVFGNADPLKHPRSWNLSKLLKEF 864
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
I I GK+L GIS + LKS+ +L E +SI+I+NF+ P+LPKPPN FRGIRRKSSSL
Sbjct: 865 ITIGGKLLH----GISEEAFLKSLLQLHESSSINISNFHLPNLPKPPNAFRGIRRKSSSL 920
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
KRWLAICSDDLTKNG YR TTNLLRKYLGD LIASYL+V+ ES YDD Y+KE+ER VL+K
Sbjct: 921 KRWLAICSDDLTKNGSYRTTTNLLRKYLGDFLIASYLDVILESGYDDAYIKEIERTVLLK 980
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLD FWRDHL+NMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE+L+QY
Sbjct: 981 TLDYFWRDHLVNMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVETLLQY 1040
Query: 878 WSSPMESQELFLS 890
WSSP ESQELF+S
Sbjct: 1041 WSSPTESQELFVS 1053
>gi|255558580|ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223540534|gb|EEF42101.1| F-box and wd40 domain protein, putative [Ricinus communis]
Length = 1794
Score = 1562 bits (4044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 752/912 (82%), Positives = 819/912 (89%), Gaps = 27/912 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDGSIAEMKT VVTVNDYLA RDA
Sbjct: 835 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAHRDA 894
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM RVHRFLGLSVGLIQ+GM +ERRSNYRCDITYTNNSELGFDYLRDNLA NSEQLVM
Sbjct: 895 DWMGRVHRFLGLSVGLIQKGMTAKERRSNYRCDITYTNNSELGFDYLRDNLAGNSEQLVM 954
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+KD ARYPVAAKVAELLV+GLHY VELK
Sbjct: 955 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANKDAARYPVAAKVAELLVRGLHYNVELK 1014
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+NSVELTEEGIAL+EMALETNDLWDENDPWARFVMNALKAKEFYR+DVQYIVRNGKALII
Sbjct: 1015 DNSVELTEEGIALSEMALETNDLWDENDPWARFVMNALKAKEFYRQDVQYIVRNGKALII 1074
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 1075 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 1134
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQMPVIEVPTNLPNIR DL IQ+FATARGKWEY RQE+E MFR GRPVLVG+
Sbjct: 1135 EEKEFLKMFQMPVIEVPTNLPNIRKDLTIQAFATARGKWEYVRQEIECMFRQGRPVLVGT 1194
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLSDLLKQ IPHNVLNARPKYAAREAE +AQAGRKYAITISTNMAGRGTDII
Sbjct: 1195 TSVENSEYLSDLLKQWKIPHNVLNARPKYAAREAEIIAQAGRKYAITISTNMAGRGTDII 1254
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK+I+ED LL LTREA + E D +T S KV+S+IK+GS+SLALLAK AL+A
Sbjct: 1255 LGGNPKMLAKEIVEDSLLSFLTREAPDAEADGETISEKVMSKIKVGSTSLALLAKTALMA 1314
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYVGK+EGKSWTYQEA+ S+S+EMSQ+M++ +LQK ++QS MYPLGPT+ALTYLSVL
Sbjct: 1315 KYVGKSEGKSWTYQEARLMISDSLEMSQAMDVNQLQKAANEQSEMYPLGPTIALTYLSVL 1374
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
K+CEVHC NEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF+VSLQDEM
Sbjct: 1375 KECEVHCFNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFIVSLQDEM 1434
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LISRI+NDED+PIEGD IV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 1435 FQKFNFDTEWAVKLISRISNDEDIPIEGDVIVKQLLALQINAEKYFFGIRKSLVEFDEVL 1494
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYD+RQ ILTG ESCSQ I QYMQAVVDEI+FGN DP KHPR WSLDKLL+EF
Sbjct: 1495 EVQRKHVYDVRQLILTGDEESCSQHISQYMQAVVDEIVFGNADPSKHPRIWSLDKLLREF 1554
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
+ I G ++D GI+G+ LL+S+ + EL+S++I++FY P+LPKPP+ FRGIRRK SL
Sbjct: 1555 VIIGGNLVD----GITGEALLESLLQFHELSSVNIDDFYLPNLPKPPHAFRGIRRKCYSL 1610
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
KRWL ICSD+ TKNG YR TNLLRKYLGD LIASY + V+ES YDD Y+KE+ERAVL+K
Sbjct: 1611 KRWLTICSDEFTKNGGYRIATNLLRKYLGDFLIASYWDAVRESGYDDAYIKEIERAVLLK 1670
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE+L+QY
Sbjct: 1671 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVETLLQY 1730
Query: 878 WSSPMESQELFL 889
WSSPMESQELF+
Sbjct: 1731 WSSPMESQELFV 1742
>gi|449457678|ref|XP_004146575.1| PREDICTED: protein translocase subunit SECA2, chloroplastic-like
[Cucumis sativus]
Length = 1057
Score = 1558 bits (4033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/912 (82%), Positives = 814/912 (89%), Gaps = 23/912 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 146 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALPGEGVHVVTVNDYLAQRDA 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM +ERRSNYRCDITYTNNSELGFDYLRDNLA N QLVM
Sbjct: 206 EWMGRVHRFLGLSVGLIQRGMTAKERRSNYRCDITYTNNSELGFDYLRDNLAGNDGQLVM 265
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKD RYPVAAKVAELLV+G+HY VELK
Sbjct: 266 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAGRYPVAAKVAELLVKGVHYNVELK 325
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+NSVELTEEGIA+AE+ALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII
Sbjct: 326 DNSVELTEEGIAMAEIALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 385
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 386 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKT 445
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ PVIEVPTNLPNIR DLPIQ+FATARGKWEYARQEVE MFR GRPVLVG+
Sbjct: 446 EEKEFLKMFQTPVIEVPTNLPNIRKDLPIQAFATARGKWEYARQEVEYMFRQGRPVLVGT 505
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLSDLLK++ IPHNVLNARPKYAAREAETVAQAGRK+AITISTNMAGRGTDII
Sbjct: 506 TSVENSEYLSDLLKERKIPHNVLNARPKYAAREAETVAQAGRKHAITISTNMAGRGTDII 565
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK+IIED LL LT+E+ + E+D + KVLS+I +GSSSLALLAK AL+A
Sbjct: 566 LGGNPKMLAKEIIEDSLLSFLTKESPDYEIDGEELPRKVLSKINVGSSSLALLAKTALMA 625
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYV K EG++WTY+EAKS ESVEMSQSM+ KEL++L D+Q YPLGPTVAL YLSVL
Sbjct: 626 KYVCKNEGRNWTYKEAKSIILESVEMSQSMSFKELERLADEQIETYPLGPTVALAYLSVL 685
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
+DCEVHCS EG+EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 686 EDCEVHCSKEGAEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 745
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LISRITNDED+PIEGDAIV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 746 FQKFNFDTEWAVRLISRITNDEDIPIEGDAIVKQLLALQINAEKYFFGIRKSLVEFDEVL 805
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVY+LRQSILTG NESC+Q IFQYMQAVVDEI+F +VDP KHPR W L KL++EF
Sbjct: 806 EVQRKHVYNLRQSILTGNNESCTQHIFQYMQAVVDEIVFSHVDPKKHPRSWRLGKLVQEF 865
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
I GKIL+DL A I+ + LLK+I +L + S D+ N P++PKPPN FRGIR K+SSL
Sbjct: 866 KTIGGKILEDLGAEITEEGLLKAIMKLHQTISTDVCNLNLPEMPKPPNAFRGIRMKNSSL 925
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
+RWL+ICSDDLT NGRYR NLLRKYLGD LIASYLNV+QES YDD Y+KE+ERAVLVK
Sbjct: 926 ERWLSICSDDLTPNGRYRMIANLLRKYLGDFLIASYLNVIQESGYDDSYVKEIERAVLVK 985
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDCFWRDHLINMNRLSSAVNVRSFGHR+PLEEYKIDGCRFFIS+LSATRRLTVESL++Y
Sbjct: 986 TLDCFWRDHLINMNRLSSAVNVRSFGHRHPLEEYKIDGCRFFISVLSATRRLTVESLLRY 1045
Query: 878 WSSPMESQELFL 889
WSSPME+QEL
Sbjct: 1046 WSSPMETQELIF 1057
>gi|356518567|ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
Length = 1815
Score = 1529 bits (3958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/913 (81%), Positives = 814/913 (89%), Gaps = 23/913 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 903 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDA 962
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EERR NY DITYTNNSELGFDYLRDNLA NSEQLVM
Sbjct: 963 EWMGRVHRFLGLSVGLIQRGMNSEERRLNYGRDITYTNNSELGFDYLRDNLAGNSEQLVM 1022
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKD AR+PVAAKVAELL+QG+HY VELK
Sbjct: 1023 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARFPVAAKVAELLIQGIHYKVELK 1082
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+NSVELTEEGI LAEMALETNDLWDENDPWARFVMNA+KAKEFYRRDVQY+VR+GKALII
Sbjct: 1083 DNSVELTEEGIDLAEMALETNDLWDENDPWARFVMNAIKAKEFYRRDVQYMVRDGKALII 1142
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 1143 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 1202
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQMPVIEVPTNLPNIR DLPIQ+FATARGKWE R+EVE MFR GRPVLVG+
Sbjct: 1203 EEKEFLKMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVEYMFRQGRPVLVGT 1262
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSE LS LL++ IPHNVLNARPKYAA+EAE VAQAGRK+AIT+STNMAGRGTDII
Sbjct: 1263 TSVENSELLSGLLREWNIPHNVLNARPKYAAKEAEIVAQAGRKHAITLSTNMAGRGTDII 1322
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLA++IIED LL LTRE NVE+ D+ S KVL ++K+GSSS+ALLAK L+A
Sbjct: 1323 LGGNPKMLAREIIEDSLLSFLTREDPNVELADEAISQKVLPKVKVGSSSMALLAKTTLMA 1382
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYV K+EGKSWTYQ+AKSF E+VEMS S +L+ L+KL +++S +YPLGPTVAL YLSVL
Sbjct: 1383 KYVSKSEGKSWTYQKAKSFILEAVEMSLSYSLEGLEKLANEESEIYPLGPTVALAYLSVL 1442
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 1443 KDCEEHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 1502
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGDAIV+QLL LQI+AEK++FGIRK+LVEFDEVL
Sbjct: 1503 FQKFNFDTEWAVRLISKITNDEDLPIEGDAIVKQLLALQINAEKFFFGIRKNLVEFDEVL 1562
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ ILTG +ESCSQ IFQYMQAVVDEI+F N+DPLKHPR W L KLLKEF
Sbjct: 1563 EVQRKHVYDLRQLILTGDDESCSQHIFQYMQAVVDEIVFSNIDPLKHPRSWGLSKLLKEF 1622
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
+ + GK+L + GIS DTLL S+ + +L+S+DI NF P+LP PPN FRGIRRKSSSL
Sbjct: 1623 VTVGGKLLRESLGGISDDTLLNSLGLVNDLSSVDIVNFSLPNLPAPPNAFRGIRRKSSSL 1682
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
+RWLAIC+DDL NG+Y+ T+NLLRKYLGD LIASYLNVV+ES YD+ + KE+ERAVL++
Sbjct: 1683 RRWLAICTDDLIGNGKYQTTSNLLRKYLGDFLIASYLNVVEESGYDERHAKEIERAVLLQ 1742
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDCFWRDHL+NMNRLSSAVN+RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE+L++Y
Sbjct: 1743 TLDCFWRDHLVNMNRLSSAVNIRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLRY 1802
Query: 878 WSSPMESQELFLS 890
W+SPMESQELFLS
Sbjct: 1803 WTSPMESQELFLS 1815
>gi|449523083|ref|XP_004168554.1| PREDICTED: protein translocase subunit SECA2, chloroplastic-like,
partial [Cucumis sativus]
Length = 878
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/864 (84%), Positives = 790/864 (91%)
Query: 26 VTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLR 85
VTVNDYLAQRDAEWM RVHRFLGLSVGLIQRGM +ERRSNYRCDITYTNNSELGFDYLR
Sbjct: 1 VTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMTAKERRSNYRCDITYTNNSELGFDYLR 60
Query: 86 DNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAEL 145
DNLA N QLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKD RYPVAAKVAEL
Sbjct: 61 DNLAGNDGQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAGRYPVAAKVAEL 120
Query: 146 LVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDV 205
LV+G+HY VELK+NSVELTEEGIA+AE+ALETNDLWDENDPWARFVMNALKAKEFYRRDV
Sbjct: 121 LVKGVHYNVELKDNSVELTEEGIAMAEIALETNDLWDENDPWARFVMNALKAKEFYRRDV 180
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSV+VAQITYQSLFKLY
Sbjct: 181 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVIVAQITYQSLFKLY 240
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
PKLSGMTGTAKTEEKEFLKMFQ PVIEVPTNLPNIR DLPIQ+FATARGKWEYARQEVE
Sbjct: 241 PKLSGMTGTAKTEEKEFLKMFQTPVIEVPTNLPNIRKDLPIQAFATARGKWEYARQEVEY 300
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
MFR GRPVLVG+TSVENSEYLSDLLK++ IPHNVLNARPKYAAREAETVAQAGRK+AITI
Sbjct: 301 MFRQGRPVLVGTTSVENSEYLSDLLKERKIPHNVLNARPKYAAREAETVAQAGRKHAITI 360
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSS 445
STNMAGRGTDIILGGNPKMLAK+IIED LL LT+E+ + E+D + S KVLS+I +GSS
Sbjct: 361 STNMAGRGTDIILGGNPKMLAKEIIEDSLLSFLTKESPDYEIDGEELSRKVLSKINVGSS 420
Query: 446 SLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPL 505
SLALLAK AL+AKYV K EG++WTY+EAKS ESVEMSQSM+ KEL++L D+Q YPL
Sbjct: 421 SLALLAKTALMAKYVCKNEGRNWTYKEAKSIILESVEMSQSMSFKELERLADEQIETYPL 480
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
GPTVAL YLSVL+DCEVHCS EG+EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG
Sbjct: 481 GPTVALAYLSVLEDCEVHCSKEGAEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 540
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
STRFMVSLQDEMFQKF+FDT WAV LISRITNDED+PIEGDAIV+QLL LQI+AEKY+FG
Sbjct: 541 STRFMVSLQDEMFQKFNFDTEWAVRLISRITNDEDIPIEGDAIVKQLLALQINAEKYFFG 600
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRKSLVEFDEVLEVQRKHVY+LRQSILTG NESC+Q IFQYMQAVVDEI+F +VDP KHP
Sbjct: 601 IRKSLVEFDEVLEVQRKHVYNLRQSILTGNNESCTQHIFQYMQAVVDEIVFSHVDPKKHP 660
Query: 686 RYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
R W L KL++EF I GKIL+DL A I+ + LLK+I +L + S D+ N P++PKPPN
Sbjct: 661 RSWRLGKLVQEFKTIGGKILEDLGAEITEEGLLKAIMKLHQTISTDVCNLNLPEMPKPPN 720
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
FRGIR K+SSL+RWL+ICSDDLT NGRYR NLLRKYLGD LIASYLNV+QES YDD
Sbjct: 721 AFRGIRMKNSSLERWLSICSDDLTPNGRYRMIANLLRKYLGDFLIASYLNVIQESGYDDS 780
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
Y+KE+ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHR+PLEEYKIDGCRFFIS+LSA
Sbjct: 781 YVKEIERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRHPLEEYKIDGCRFFISVLSA 840
Query: 866 TRRLTVESLVQYWSSPMESQELFL 889
TRRLTVESL++YWSSPME+QEL
Sbjct: 841 TRRLTVESLLRYWSSPMETQELIF 864
>gi|334182752|ref|NP_001185059.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|363805541|sp|D8WUA4.1|SECA2_ARATH RecName: Full=Protein translocase subunit SECA2, chloroplastic;
Flags: Precursor
gi|298108793|gb|ADI56650.1| plastid SecA2 [Arabidopsis thaliana]
gi|332192013|gb|AEE30134.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1058
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/913 (79%), Positives = 810/913 (88%), Gaps = 23/913 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGG VLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 146 MRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EER+ NY CDITYTNNSELGFDYLRDNL +N EQLVM
Sbjct: 206 EWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVM 265
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+++ ARYPVAAKVAELLV+ HY VELK
Sbjct: 266 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELK 325
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
NSVELTEEGI+LAEMALET DLWDENDPWARFVMNALKAKEFY+RDVQYIVR+GKALII
Sbjct: 326 ENSVELTEEGISLAEMALETGDLWDENDPWARFVMNALKAKEFYKRDVQYIVRDGKALII 385
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE+KRRWSEG+HQAVEAKEGL+IQADS+VVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 386 NELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKT 445
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ+PVIEVPTNL NIR+DLPIQ+FATARGKWE+ R+EVE MF GRPVLVG+
Sbjct: 446 EEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGT 505
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLS+LLK+ GIPHNVLNARPKYAAREA+ +AQAGRKYAITISTNMAGRGTDII
Sbjct: 506 TSVENSEYLSELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDII 565
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLA++IIED +L LT E L +DD S KVLS+IK+G SSLALLA+A+L+A
Sbjct: 566 LGGNPKMLAREIIEDSILSYLTSEVLADNIDDDELSQKVLSKIKVGPSSLALLARASLMA 625
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYVGK+E KSWT ++AKS +ES+E SQ+M+ ELQ LI++QS MYPLGP +AL YLSVL
Sbjct: 626 KYVGKSESKSWTRKKAKSVVTESLEKSQTMDPMELQNLINEQSEMYPLGPAIALAYLSVL 685
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM+SLQDEM
Sbjct: 686 KDCEAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEM 745
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGD IV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 746 FQKFNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVL 805
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ +LTG NESCSQ IFQYMQAVVDEI+ GN +P KHPRYWSL KLLKEF
Sbjct: 806 EVQRKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLLKEF 865
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
+AI+G +LD+ F+GI+ +T+L+S+E L E +SI++ + P LPKPPN FRGIRRK+SSL
Sbjct: 866 MAISGNLLDESFSGITEETMLQSLENLHEGSSIEMEDLSLPHLPKPPNAFRGIRRKNSSL 925
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
+RWL ICSD+LT +G YR NLLRK+LGD LIASYLNVVQES +DD Y+KE+ERAVL+K
Sbjct: 926 RRWLDICSDNLTGSGSYRTLINLLRKFLGDYLIASYLNVVQESGFDDGYIKEIERAVLLK 985
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDC+WRDHL+NMN+LSSAVNVRSF HRNPLEEYKIDGCRFFISMLSATRRLTVES++QY
Sbjct: 986 TLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVESILQY 1045
Query: 878 WSSPMESQELFLS 890
WSSPMESQELF+S
Sbjct: 1046 WSSPMESQELFIS 1058
>gi|334182750|ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|332192012|gb|AEE30133.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1805
Score = 1514 bits (3919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/913 (79%), Positives = 810/913 (88%), Gaps = 23/913 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGG VLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 893 MRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 952
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EER+ NY CDITYTNNSELGFDYLRDNL +N EQLVM
Sbjct: 953 EWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVM 1012
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+++ ARYPVAAKVAELLV+ HY VELK
Sbjct: 1013 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELK 1072
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
NSVELTEEGI+LAEMALET DLWDENDPWARFVMNALKAKEFY+RDVQYIVR+GKALII
Sbjct: 1073 ENSVELTEEGISLAEMALETGDLWDENDPWARFVMNALKAKEFYKRDVQYIVRDGKALII 1132
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE+KRRWSEG+HQAVEAKEGL+IQADS+VVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 1133 NELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKT 1192
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ+PVIEVPTNL NIR+DLPIQ+FATARGKWE+ R+EVE MF GRPVLVG+
Sbjct: 1193 EEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGT 1252
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLS+LLK+ GIPHNVLNARPKYAAREA+ +AQAGRKYAITISTNMAGRGTDII
Sbjct: 1253 TSVENSEYLSELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDII 1312
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLA++IIED +L LT E L +DD S KVLS+IK+G SSLALLA+A+L+A
Sbjct: 1313 LGGNPKMLAREIIEDSILSYLTSEVLADNIDDDELSQKVLSKIKVGPSSLALLARASLMA 1372
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYVGK+E KSWT ++AKS +ES+E SQ+M+ ELQ LI++QS MYPLGP +AL YLSVL
Sbjct: 1373 KYVGKSESKSWTRKKAKSVVTESLEKSQTMDPMELQNLINEQSEMYPLGPAIALAYLSVL 1432
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM+SLQDEM
Sbjct: 1433 KDCEAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEM 1492
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGD IV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 1493 FQKFNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVL 1552
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ +LTG NESCSQ IFQYMQAVVDEI+ GN +P KHPRYWSL KLLKEF
Sbjct: 1553 EVQRKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLLKEF 1612
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
+AI+G +LD+ F+GI+ +T+L+S+E L E +SI++ + P LPKPPN FRGIRRK+SSL
Sbjct: 1613 MAISGNLLDESFSGITEETMLQSLENLHEGSSIEMEDLSLPHLPKPPNAFRGIRRKNSSL 1672
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
+RWL ICSD+LT +G YR NLLRK+LGD LIASYLNVVQES +DD Y+KE+ERAVL+K
Sbjct: 1673 RRWLDICSDNLTGSGSYRTLINLLRKFLGDYLIASYLNVVQESGFDDGYIKEIERAVLLK 1732
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDC+WRDHL+NMN+LSSAVNVRSF HRNPLEEYKIDGCRFFISMLSATRRLTVES++QY
Sbjct: 1733 TLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVESILQY 1792
Query: 878 WSSPMESQELFLS 890
WSSPMESQELF+S
Sbjct: 1793 WSSPMESQELFIS 1805
>gi|240254134|ref|NP_173584.5| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|332192011|gb|AEE30132.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1051
Score = 1505 bits (3896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 725/913 (79%), Positives = 805/913 (88%), Gaps = 30/913 (3%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGG VLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 146 MRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EER+ NY CDITYTNNSELGFDYLRDNL +N EQLVM
Sbjct: 206 EWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVM 265
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+++ ARYPVAAKVAELLV+ HY VELK
Sbjct: 266 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELK 325
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
NSVELTEEGI+LAEMALET DLWDENDPWARFVMNALKAKEFY+RDVQYIVR+GKALII
Sbjct: 326 ENSVELTEEGISLAEMALETGDLWDENDPWARFVMNALKAKEFYKRDVQYIVRDGKALII 385
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE+KRRWSEG+HQAVEAKEGL+IQADS+VVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 386 NELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKT 445
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ+PVIEVPTNL NIR+DLPIQ+FATARGKWE+ R+EVE MF GRPVLVG+
Sbjct: 446 EEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGT 505
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLS+LLK+ GIPHNVLNARPKYAAREA+ +AQAGRKYAITISTNMAGRGTDII
Sbjct: 506 TSVENSEYLSELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDII 565
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLA++IIED +L LT E L +DD S KVLS+IK+G SSLALLA+A+L+A
Sbjct: 566 LGGNPKMLAREIIEDSILSYLTSEVLADNIDDDELSQKVLSKIKVGPSSLALLARASLMA 625
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYVGK+E KSWT ++AKS +ES+E SQ+M+ ELQ LI++QS MYPLGP +AL YLSVL
Sbjct: 626 KYVGKSESKSWTRKKAKSVVTESLEKSQTMDPMELQNLINEQSEMYPLGPAIALAYLSVL 685
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM+SLQDEM
Sbjct: 686 KDCEAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEM 745
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGD IV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 746 FQKFNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVL 805
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ +LTG NESCSQ IFQYMQAVVDEI+ GN +P KHPRYWSL KLLKEF
Sbjct: 806 EVQRKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLLKEF 865
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
+AI+G +LD+ +T+L+S+E L E +SI++ + P LPKPPN FRGIRRK+SSL
Sbjct: 866 MAISGNLLDE-------ETMLQSLENLHEGSSIEMEDLSLPHLPKPPNAFRGIRRKNSSL 918
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
+RWL ICSD+LT +G YR NLLRK+LGD LIASYLNVVQES +DD Y+KE+ERAVL+K
Sbjct: 919 RRWLDICSDNLTGSGSYRTLINLLRKFLGDYLIASYLNVVQESGFDDGYIKEIERAVLLK 978
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLDC+WRDHL+NMN+LSSAVNVRSF HRNPLEEYKIDGCRFFISMLSATRRLTVES++QY
Sbjct: 979 TLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVESILQY 1038
Query: 878 WSSPMESQELFLS 890
WSSPMESQELF+S
Sbjct: 1039 WSSPMESQELFIS 1051
>gi|357157296|ref|XP_003577750.1| PREDICTED: protein translocase subunit SecA-like [Brachypodium
distachyon]
Length = 1060
Score = 1422 bits (3682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/911 (74%), Positives = 781/911 (85%), Gaps = 23/911 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 145 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTGDGVHVVTVNDYLAQRDA 204
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGL+VGLIQ GM +ERR+NYRCDITYTNNSELGFDYLRDNL+ EQLVM
Sbjct: 205 EWMGRVHRFLGLTVGLIQAGMKSDERRANYRCDITYTNNSELGFDYLRDNLSRKKEQLVM 264
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP+PFHFAIVDEVDSVLIDEGRNPLLISGE +++ ARYPVAAKVA+LL++G HYTVELK
Sbjct: 265 RWPRPFHFAIVDEVDSVLIDEGRNPLLISGEDNREAARYPVAAKVADLLMEGAHYTVELK 324
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N+++LTE+G++ AEM L TNDLWDENDPWARFVMNALKAKEFYRRDVQYI+RNGKALII
Sbjct: 325 GNNIDLTEDGVSYAEMILGTNDLWDENDPWARFVMNALKAKEFYRRDVQYIIRNGKALII 384
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE KRRWS+GIHQA+EAKEGLKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 385 NELTGRVESKRRWSDGIHQAIEAKEGLKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKT 444
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMF+MPVIEVPTNLPNIRVDLPIQ+FAT RGKW+Y R+EVESMF+LGRPVLVG+
Sbjct: 445 EEKEFLKMFKMPVIEVPTNLPNIRVDLPIQAFATLRGKWQYVREEVESMFQLGRPVLVGT 504
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE+SEYLSDLLK + IPHNVLNARPKYAAREAE +AQAGRK+AITISTNMAGRGTDII
Sbjct: 505 TSVESSEYLSDLLKCRNIPHNVLNARPKYAAREAEIIAQAGRKHAITISTNMAGRGTDII 564
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK+I+ED + LT + +VE + +++S K LS+IKLG SSLALL KAA++A
Sbjct: 565 LGGNPKMLAKEILEDNIRPFLTHDIPDVETEGESTSHKGLSKIKLGPSSLALLTKAAIMA 624
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYV K+E W++Q+AKS +ES+EMS ++ +++LQ+ + + + MYPL +AL Y++VL
Sbjct: 625 KYVQKSERNEWSFQKAKSTIAESIEMSNTIGMEKLQERVAEVTEMYPLCDAIALAYITVL 684
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
DCE+HC EG+EVK LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 685 TDCEIHCLTEGAEVKALGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 744
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
F+KF+ DT WAV LISRITNDED+ IE +A+V+QLLGLQI+AEKYYFGIRKSLVEFDEVL
Sbjct: 745 FRKFNLDTEWAVRLISRITNDEDIAIESNAVVKQLLGLQINAEKYYFGIRKSLVEFDEVL 804
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVY LRQ IL+G +ESCS+QIFQYMQAVVDE+I GNVD K P+ W+L KLL EF
Sbjct: 805 EVQRKHVYSLRQVILSGDSESCSEQIFQYMQAVVDEVILGNVDAQKPPKTWNLAKLLDEF 864
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
I++ G L + F I + L S+E++ E S++ +NF P++P PPN FRGIR+K SS+
Sbjct: 865 ISLGGNFLTETFKEIQEEDLQLSVEQILEYASLETDNFSLPNMPVPPNAFRGIRKKISSV 924
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
KRW AIC DD +K GRY T NLLRKY GD LIA+YL+V+QESRY D Y++ +ER VL+K
Sbjct: 925 KRWFAICVDDSSKKGRYTNTVNLLRKYFGDFLIATYLDVLQESRYHDAYIRGIEREVLLK 984
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLD W+DHL+NMN+LSSAVNVRSFGHRNPLEEYKIDGCRFFISML+ TRRLTVESL+ Y
Sbjct: 985 TLDALWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLNTTRRLTVESLLHY 1044
Query: 878 WSSPMESQELF 888
WSSPMES+E+F
Sbjct: 1045 WSSPMESEEIF 1055
>gi|326517190|dbj|BAJ99961.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1058
Score = 1412 bits (3654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/911 (73%), Positives = 776/911 (85%), Gaps = 23/911 (2%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 143 MRHFDVQIVGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTGDGVHVVTVNDYLAQRDA 202
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVH FLGL+VGLIQ GM +ERR+NY CDITYTNNSELGFDYLRDNL+ EQLVM
Sbjct: 203 EWMGRVHCFLGLTVGLIQAGMKSDERRANYMCDITYTNNSELGFDYLRDNLSRKKEQLVM 262
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP+PFHF+IVDEVDSVLIDEGRNPLLISGE +++ ARYPVAAKVA+LL++G HYTVELK
Sbjct: 263 RWPRPFHFSIVDEVDSVLIDEGRNPLLISGEDNREAARYPVAAKVADLLMEGAHYTVELK 322
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N+++LTE+G+ AEM L TNDLWDENDPWARFV NALKAKEFYRRDVQYIVRNGKALII
Sbjct: 323 GNNIDLTEDGVTYAEMILGTNDLWDENDPWARFVTNALKAKEFYRRDVQYIVRNGKALII 382
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE KRRWS+GIHQAVEAKEGLKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 383 NELTGRVEPKRRWSDGIHQAVEAKEGLKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKT 442
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMF+MPVIEVPTNLPNIRVDLPIQ+FAT RGKW+Y R+EVESMF+LGRPVLVG+
Sbjct: 443 EEKEFLKMFKMPVIEVPTNLPNIRVDLPIQAFATLRGKWQYVREEVESMFQLGRPVLVGT 502
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE+SEYLSDLLK + IPHNVLNARPKYAA+EAE +AQAGRK+AITISTNMAGRGTDII
Sbjct: 503 TSVESSEYLSDLLKSRNIPHNVLNARPKYAAKEAEIIAQAGRKHAITISTNMAGRGTDII 562
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLAK+I+ED +L L+ +A +VE + +++S K LS+IKLG SSLALLAKAA++A
Sbjct: 563 LGGNPKMLAKEIVEDNVLPFLSHDAPDVETEGESTSHKGLSKIKLGPSSLALLAKAAIMA 622
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYV K+E W++Q+AKS ES+EMS ++ L++LQ+ + + + MYPL +AL Y +VL
Sbjct: 623 KYVHKSENNEWSFQKAKSTIMESIEMSNTIGLEKLQERVAEVTEMYPLCDAIALAYATVL 682
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE+HC +EG+EVK LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
Sbjct: 683 KDCEIHCFDEGAEVKTLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 742
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
F+KF+ DT WAV LISRITN ED+ IE +A+V+QLLGLQI+AEKYYFGIRK+LVEFDEVL
Sbjct: 743 FRKFNLDTEWAVRLISRITNGEDIAIESNAVVKQLLGLQINAEKYYFGIRKNLVEFDEVL 802
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKH+Y LRQ IL+G +ESCS+QIFQYMQAVVDEII GNVDP K P+ W L KLL EF
Sbjct: 803 EVQRKHIYSLRQVILSGDSESCSEQIFQYMQAVVDEIILGNVDPQKPPKTWDLAKLLDEF 862
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
++ G +L + F + L S+E++ S++++NF P+LP PPN FRGIR+++SS
Sbjct: 863 SSLGGNLLTETFKETQEEDLQSSLEQILRYGSVEVDNFVLPNLPAPPNSFRGIRKRTSSA 922
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
RW A+C DD +K GRY NLLRKY GD LIA+YL V+QESRY D Y++ +ER L+K
Sbjct: 923 MRWFAMCVDDTSKKGRYTNIVNLLRKYFGDFLIATYLEVLQESRYHDAYIRGIEREALLK 982
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
TLD W+DHL+NMN+LSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE+L++Y
Sbjct: 983 TLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLRY 1042
Query: 878 WSSPMESQELF 888
WSSPMES+E+F
Sbjct: 1043 WSSPMESEEIF 1053
>gi|125576502|gb|EAZ17724.1| hypothetical protein OsJ_33268 [Oryza sativa Japonica Group]
Length = 1096
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/945 (72%), Positives = 777/945 (82%), Gaps = 57/945 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 147 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDA 206
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQ GM +ERR+NYRCDITYTNNSELGFDYLRDNL+ N EQLVM
Sbjct: 207 EWMGRVHRFLGLSVGLIQAGMKADERRANYRCDITYTNNSELGFDYLRDNLSRNKEQLVM 266
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP PFHFAIVDEVDSVLIDEGRNPLLISGE ++D ARYPVAAK A+LL++G HYTVELK
Sbjct: 267 RWPTPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAARYPVAAKAADLLMEGFHYTVELK 326
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+N+++LTE+G+ AEM LETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR+GKALII
Sbjct: 327 SNNIDLTEDGVTCAEMILETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRDGKALII 386
Query: 218 NE----------------------------------LTGRVEEKRRWSEGIHQAVEAKEG 243
NE LTGRVE KRRWS+GIHQAVEAKEG
Sbjct: 387 NEIIMWNLSFKVVMPILQYCIVPINGISIIILTLFELTGRVEPKRRWSDGIHQAVEAKEG 446
Query: 244 LKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVD 303
LKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMF+ PVIEVPTNLPNIRVD
Sbjct: 447 LKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFKTPVIEVPTNLPNIRVD 506
Query: 304 LPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNAR 363
LPIQ+FATARGKW+Y R EVESMF LGRPVLVG+TSVE+SEYLSDLLK + IPHNVLNAR
Sbjct: 507 LPIQAFATARGKWQYVRAEVESMFHLGRPVLVGTTSVESSEYLSDLLKARNIPHNVLNAR 566
Query: 364 PKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREAL 423
PKYAAREAE VAQAGRK+AITISTNMAGRGTDIILGGNPKMLAK+IIED +L LT E
Sbjct: 567 PKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAKEIIEDNVLPFLTHEPP 626
Query: 424 NVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM 483
+VE +++S K LS+IKLG SSL LLAKAA++AKYV ++E W +Q+AKS +ESVEM
Sbjct: 627 DVETVGESTSHKGLSKIKLGPSSLGLLAKAAIIAKYVQRSERNEWPFQKAKSTIAESVEM 686
Query: 484 SQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTS 543
S ++ +++LQ + ++S MYPL T+ L YL+VL+DCE+HCS EG+EVK LGGLHVIGTS
Sbjct: 687 SHTIGMEKLQDRLAEESEMYPLCDTIGLAYLTVLRDCEIHCSTEGAEVKALGGLHVIGTS 746
Query: 544 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPI 603
LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMF+KF+ DT WAV LISRITNDED+ I
Sbjct: 747 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFRKFNLDTEWAVRLISRITNDEDIAI 806
Query: 604 EGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQI 663
E +A+V+QLLGLQI+AEKYYFGIRKSLVEFDEVLEVQRKHVY+LRQ IL+G +ESCS+QI
Sbjct: 807 ESNAVVKQLLGLQINAEKYYFGIRKSLVEFDEVLEVQRKHVYNLRQVILSGDSESCSEQI 866
Query: 664 FQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
FQYMQAV D+II GN DP K P W L LL EF ++ G +LD+ F I + LL S+E+
Sbjct: 867 FQYMQAVADDIILGNADPQKPPNTWKLANLLDEFGSLGGTLLDEPFKEIQEEDLLSSLEQ 926
Query: 724 LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRK 783
+ E ++++NF P++P PN FRGI +++SS+ RWLAIC DD +K GRY N+LRK
Sbjct: 927 IHEYGPVNVDNFTLPNMPVSPNSFRGIWKRTSSMMRWLAICVDDASKKGRYTYIVNMLRK 986
Query: 784 YLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
Y GD LIA+YL+ VQESRYDD Y++ +ER +L+KTLD W+DHL+NMN+LSSAVNVRSFG
Sbjct: 987 YFGDFLIATYLDAVQESRYDDAYIRGIEREILLKTLDTLWKDHLVNMNKLSSAVNVRSFG 1046
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
HRNPLEEYKIDGCRFFISML ATRRLTVESL+ YWSSPMES+E+F
Sbjct: 1047 HRNPLEEYKIDGCRFFISMLGATRRLTVESLLHYWSSPMESEEIF 1091
>gi|115484559|ref|NP_001067423.1| Os11g0195100 [Oryza sativa Japonica Group]
gi|113644645|dbj|BAF27786.1| Os11g0195100 [Oryza sativa Japonica Group]
Length = 1112
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/961 (70%), Positives = 777/961 (80%), Gaps = 73/961 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 147 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDA 206
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNS----------------ELGF 81
EWM RVHRFLGLSVGLIQ GM +ERR+NYRCDITYTNNS ELGF
Sbjct: 207 EWMGRVHRFLGLSVGLIQAGMKADERRANYRCDITYTNNSYFYGIIWFSKITHNLQELGF 266
Query: 82 DYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK 141
DYLRDNL+ N EQLVMRWP PFHFAIVDEVDSVLIDEGRNPLLISGE ++D ARYPVAAK
Sbjct: 267 DYLRDNLSRNKEQLVMRWPTPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAARYPVAAK 326
Query: 142 VAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFY 201
A+LL++G HYTVELK+N+++LTE+G+ AEM LETNDLWDENDPWARFVMNALKAKEFY
Sbjct: 327 AADLLMEGFHYTVELKSNNIDLTEDGVTCAEMILETNDLWDENDPWARFVMNALKAKEFY 386
Query: 202 RRDVQYIVRNGKALIINE----------------------------------LTGRVEEK 227
RRDVQYIVR+GKALIINE LTGRVE K
Sbjct: 387 RRDVQYIVRDGKALIINEIIMWNLSFKVVMPILQYCIVPINGISIIILTLFELTGRVEPK 446
Query: 228 RRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQ 287
RRWS+GIHQAVEAKEGLKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMF+
Sbjct: 447 RRWSDGIHQAVEAKEGLKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFK 506
Query: 288 MPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLS 347
PVIEVPTNLPNIRVDLPIQ+FATARGKW+Y R EVESMF LGRPVLVG+TSVE+SEYLS
Sbjct: 507 TPVIEVPTNLPNIRVDLPIQAFATARGKWQYVRAEVESMFHLGRPVLVGTTSVESSEYLS 566
Query: 348 DLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
DLLK + IPHNVLNARPKYAAREAE VAQAGRK+AITISTNMAGRGTDIILGGNPKMLAK
Sbjct: 567 DLLKARNIPHNVLNARPKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAK 626
Query: 408 KIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKS 467
+IIED +L LT E +VE +++S K LS+IKLG SSL LLAKAA++AKYV ++E
Sbjct: 627 EIIEDNVLPFLTHEPPDVETVGESTSHKGLSKIKLGPSSLGLLAKAAIIAKYVQRSERNE 686
Query: 468 WTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNE 527
W +Q+AKS +ESVEMS ++ +++LQ + ++S MYPL T+ L YL+VL+DCE+HCS E
Sbjct: 687 WPFQKAKSTIAESVEMSHTIGMEKLQDRLAEESEMYPLCDTIGLAYLTVLRDCEIHCSTE 746
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G+EVK LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMF+KF+ DT W
Sbjct: 747 GAEVKALGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFRKFNLDTEW 806
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV LISRITNDED+ IE +A+V+QLLGLQI+AEKYYFGIRKSLVEFDEVLEVQRKHVY+L
Sbjct: 807 AVRLISRITNDEDIAIESNAVVKQLLGLQINAEKYYFGIRKSLVEFDEVLEVQRKHVYNL 866
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
RQ IL+G +ESCS+QIFQYMQAV D+II GN DP K P W L LL EF ++ G +LD+
Sbjct: 867 RQVILSGDSESCSEQIFQYMQAVADDIILGNADPQKPPNTWKLANLLDEFGSLGGTLLDE 926
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F I + LL S+E++ E ++++NF P++P PN FRGI +++SS+ RWLAIC DD
Sbjct: 927 PFKEIQEEDLLSSLEQIHEYGPVNVDNFTLPNMPVSPNSFRGIWKRTSSMMRWLAICVDD 986
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+K GRY N+LRKY GD LIA+YL+ VQESRYDD Y++ +ER +L+KTLD W+DHL
Sbjct: 987 ASKKGRYTYIVNMLRKYFGDFLIATYLDAVQESRYDDAYIRGIEREILLKTLDTLWKDHL 1046
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQEL 887
+NMN+LSSAVNVRSFGHRNPLEEYKIDGCRFFISML ATRRLTVESL+ YWSSPMES+E+
Sbjct: 1047 VNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLGATRRLTVESLLHYWSSPMESEEI 1106
Query: 888 F 888
F
Sbjct: 1107 F 1107
>gi|242067783|ref|XP_002449168.1| hypothetical protein SORBIDRAFT_05g005960 [Sorghum bicolor]
gi|241935011|gb|EES08156.1| hypothetical protein SORBIDRAFT_05g005960 [Sorghum bicolor]
Length = 1093
Score = 1387 bits (3591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/940 (70%), Positives = 779/940 (82%), Gaps = 52/940 (5%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVL+DG IAEMKT VVTVNDYLAQRDA
Sbjct: 149 MRHFDVQIIGGAVLNDGCIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 208
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNS-------------------- 77
EWM RVHRFLGL+VGL+Q GM +ERR++YRCDITYTNNS
Sbjct: 209 EWMGRVHRFLGLTVGLVQAGMKSDERRASYRCDITYTNNSVRGTTFSGDNLFSKAAHPMQ 268
Query: 78 ELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYP 137
ELGFDYLRDNL+ N EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGE ++D ARYP
Sbjct: 269 ELGFDYLRDNLSRNKEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAARYP 328
Query: 138 VAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKA 197
+AAKVAELLV+G+HYTVELK N+++LTE+G+A AE+ L T+DLWDENDPWARFVMNALKA
Sbjct: 329 IAAKVAELLVEGVHYTVELKGNNIDLTEDGVAHAEIILGTDDLWDENDPWARFVMNALKA 388
Query: 198 KEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQIT 257
K FYRRDVQYIVR+GKA+IINELTGRVE KRRWS+GIHQAVEAKEGLKIQADSV+VAQIT
Sbjct: 389 KVFYRRDVQYIVRDGKAIIINELTGRVEPKRRWSDGIHQAVEAKEGLKIQADSVIVAQIT 448
Query: 258 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWE 317
YQSLFKLYPKLSGMTGTAKTEEKEFLKMF+MPVIEVPTNLPNIRVDLPIQ+FATARGKW+
Sbjct: 449 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFKMPVIEVPTNLPNIRVDLPIQAFATARGKWQ 508
Query: 318 YARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQA 377
Y R EVESMF+LGRPVLVG+TSVE+SEYLS+LLK + IPHNVLNARPKYAAREAE +AQA
Sbjct: 509 YVRAEVESMFQLGRPVLVGTTSVESSEYLSELLKLRNIPHNVLNARPKYAAREAEIIAQA 568
Query: 378 GRKYAITISTNMAGRGTDIILGGNPK---------MLAKKIIEDRLLLLLTREALNVEVD 428
GRK+AITISTNMAGRGTDIILGGNPK MLAK+I+ED +L L+ E +++++
Sbjct: 569 GRKHAITISTNMAGRGTDIILGGNPKKYGPSFCCQMLAKEIVEDNILPFLSHEPPDIDME 628
Query: 429 DKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMN 488
+++S K LS I+LG SS+ LLAKAA+++KY+ K+E W++ +AKS +ES+EM Q +
Sbjct: 629 GESTSHKGLSNIELGPSSVGLLAKAAIMSKYIHKSEINEWSFSKAKSTIAESIEMGQMIG 688
Query: 489 LKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
+++LQ+ + ++S MYPL + L YLSVL+DCE+HCS EG+ VKRLGGLHV+GTSLHESR
Sbjct: 689 MEKLQEHMTEESEMYPLCDAIGLAYLSVLRDCEIHCSAEGAAVKRLGGLHVVGTSLHESR 748
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
RIDNQL GRAGRQGDPGSTRFMVSLQDE+FQKF+ DT WAV LISRITNDED+ IE + +
Sbjct: 749 RIDNQLCGRAGRQGDPGSTRFMVSLQDEIFQKFNLDTEWAVRLISRITNDEDIAIESNVV 808
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
V+QLLGLQI+AEKYYFGIRKSLVEFDEVLEVQRKHVY+LRQ IL+G +ESCS+QIFQYMQ
Sbjct: 809 VKQLLGLQINAEKYYFGIRKSLVEFDEVLEVQRKHVYNLRQVILSGDSESCSEQIFQYMQ 868
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELN 728
AV DEI+ N+DP K P+ W+L KLL EF+ + GK+L + F I + L ++EE+ +
Sbjct: 869 AVADEIVLLNIDPQKPPKAWNLVKLLDEFVRLGGKLLSESFEDIQEENLQSALEEMQGWD 928
Query: 729 SIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDI 788
+ ++F P++P PP+ RGIR+K+SS+ RW AIC DD +K GRY T NLLRKY GD
Sbjct: 929 PVKADSFALPNMPVPPDSLRGIRKKTSSIMRWFAICVDDTSKKGRYTNTVNLLRKYFGDF 988
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
LIA+YLN VQESRYDD Y+ +ER VL+KTLD W+DHL+NMN+LSSAVNVRSFGHRNPL
Sbjct: 989 LIATYLNAVQESRYDDGYISGIEREVLLKTLDTLWKDHLVNMNKLSSAVNVRSFGHRNPL 1048
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
EEYKIDGCRFFISMLSATRRLTVESL+ YWSSPMES+E+F
Sbjct: 1049 EEYKIDGCRFFISMLSATRRLTVESLLHYWSSPMESEEIF 1088
>gi|108864090|gb|ABA91870.2| preprotein translocase secA family protein, putative, expressed
[Oryza sativa Japonica Group]
Length = 1096
Score = 1387 bits (3590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/945 (71%), Positives = 769/945 (81%), Gaps = 57/945 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 147 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDA 206
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQ GM +ERR+NYR N ELGFDYLRDNL+ N EQLVM
Sbjct: 207 EWMGRVHRFLGLSVGLIQAGMKADERRANYRFSKITHNLQELGFDYLRDNLSRNKEQLVM 266
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP PFHFAIVDEVDSVLIDEGRNPLLISGE ++D ARYPVAAK A+LL++G HYTVELK
Sbjct: 267 RWPTPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAARYPVAAKAADLLMEGFHYTVELK 326
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+N+++LTE+G+ AEM LETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR+GKALII
Sbjct: 327 SNNIDLTEDGVTCAEMILETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRDGKALII 386
Query: 218 NE----------------------------------LTGRVEEKRRWSEGIHQAVEAKEG 243
NE LTGRVE KRRWS+GIHQAVEAKEG
Sbjct: 387 NEIIMWNLSFKVVMPILQYCIVPINGISIIILTLFELTGRVEPKRRWSDGIHQAVEAKEG 446
Query: 244 LKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVD 303
LKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMF+ PVIEVPTNLPNIRVD
Sbjct: 447 LKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFKTPVIEVPTNLPNIRVD 506
Query: 304 LPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNAR 363
LPIQ+FATARGKW+Y R EVESMF LGRPVLVG+TSVE+SEYLSDLLK + IPHNVLNAR
Sbjct: 507 LPIQAFATARGKWQYVRAEVESMFHLGRPVLVGTTSVESSEYLSDLLKARNIPHNVLNAR 566
Query: 364 PKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREAL 423
PKYAAREAE VAQAGRK+AITISTNMAGRGTDIILGGNPKMLAK+IIED +L LT E
Sbjct: 567 PKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAKEIIEDNVLPFLTHEPP 626
Query: 424 NVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM 483
+VE +++S K LS+IKLG SSL LLAKAA++AKYV ++E W +Q+AKS +ESVEM
Sbjct: 627 DVETVGESTSHKGLSKIKLGPSSLGLLAKAAIIAKYVQRSERNEWPFQKAKSTIAESVEM 686
Query: 484 SQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTS 543
S ++ +++LQ + ++S MYPL T+ L YL+VL+DCE+HCS EG+EVK LGGLHVIGTS
Sbjct: 687 SHTIGMEKLQDRLAEESEMYPLCDTIGLAYLTVLRDCEIHCSTEGAEVKALGGLHVIGTS 746
Query: 544 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPI 603
LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMF+KF+ DT WAV LISRITNDED+ I
Sbjct: 747 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFRKFNLDTEWAVRLISRITNDEDIAI 806
Query: 604 EGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQI 663
E +A+V+QLLGLQI+AEKYYFGIRKSLVEFDEVLEVQRKHVY+LRQ IL+G +ESCS+QI
Sbjct: 807 ESNAVVKQLLGLQINAEKYYFGIRKSLVEFDEVLEVQRKHVYNLRQVILSGDSESCSEQI 866
Query: 664 FQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
FQYMQAV D+II GN DP K P W L LL EF ++ G +LD+ F I + LL S+E+
Sbjct: 867 FQYMQAVADDIILGNADPQKPPNTWKLANLLDEFGSLGGTLLDEPFKEIQEEDLLSSLEQ 926
Query: 724 LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRK 783
+ E ++++NF P++P PN FRGI +++SS+ RWLAIC DD +K GRY N+LRK
Sbjct: 927 IHEYGPVNVDNFTLPNMPVSPNSFRGIWKRTSSMMRWLAICVDDASKKGRYTYIVNMLRK 986
Query: 784 YLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
Y GD LIA+YL+ VQESRYDD Y++ +ER +L+KTLD W+DHL+NMN+LSSAVNVRSFG
Sbjct: 987 YFGDFLIATYLDAVQESRYDDAYIRGIEREILLKTLDTLWKDHLVNMNKLSSAVNVRSFG 1046
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
HRNPLEEYKIDGCRFFISML ATRRLTVESL+ YWSSPMES+E+F
Sbjct: 1047 HRNPLEEYKIDGCRFFISMLGATRRLTVESLLHYWSSPMESEEIF 1091
>gi|62733946|gb|AAX96055.1| preprotein translocase, SecA subunit [Oryza sativa Japonica Group]
Length = 1081
Score = 1359 bits (3517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/945 (70%), Positives = 759/945 (80%), Gaps = 72/945 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 147 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDA 206
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQ GM +ERR+NYRCDITYTNNS +
Sbjct: 207 EWMGRVHRFLGLSVGLIQAGMKADERRANYRCDITYTNNSYF---------------YGI 251
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
WP PFHFAIVDEVDSVLIDEGRNPLLISGE ++D ARYPVAAK A+LL++G HYTVELK
Sbjct: 252 IWPTPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAARYPVAAKAADLLMEGFHYTVELK 311
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+N+++LTE+G+ AEM LETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR+GKALII
Sbjct: 312 SNNIDLTEDGVTCAEMILETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRDGKALII 371
Query: 218 NE----------------------------------LTGRVEEKRRWSEGIHQAVEAKEG 243
NE LTGRVE KRRWS+GIHQAVEAKEG
Sbjct: 372 NEIIMWNLSFKVVMPILQYCIVPINGISIIILTLFELTGRVEPKRRWSDGIHQAVEAKEG 431
Query: 244 LKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVD 303
LKIQADSV+VAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMF+ PVIEVPTNLPNIRVD
Sbjct: 432 LKIQADSVIVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFKTPVIEVPTNLPNIRVD 491
Query: 304 LPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNAR 363
LPIQ+FATARGKW+Y R EVESMF LGRPVLVG+TSVE+SEYLSDLLK + IPHNVLNAR
Sbjct: 492 LPIQAFATARGKWQYVRAEVESMFHLGRPVLVGTTSVESSEYLSDLLKARNIPHNVLNAR 551
Query: 364 PKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREAL 423
PKYAAREAE VAQAGRK+AITISTNMAGRGTDIILGGNPKMLAK+IIED +L LT E
Sbjct: 552 PKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAKEIIEDNVLPFLTHEPP 611
Query: 424 NVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM 483
+VE +++S K LS+IKLG SSL LLAKAA++AKYV ++E W +Q+AKS +ESVEM
Sbjct: 612 DVETVGESTSHKGLSKIKLGPSSLGLLAKAAIIAKYVQRSERNEWPFQKAKSTIAESVEM 671
Query: 484 SQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTS 543
S ++ +++LQ + ++S MYPL T+ L YL+VL+DCE+HCS EG+EVK LGGLHVIGTS
Sbjct: 672 SHTIGMEKLQDRLAEESEMYPLCDTIGLAYLTVLRDCEIHCSTEGAEVKALGGLHVIGTS 731
Query: 544 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPI 603
LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMF+KF+ DT WAV LISRITNDED+ I
Sbjct: 732 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFRKFNLDTEWAVRLISRITNDEDIAI 791
Query: 604 EGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQI 663
E +A+V+QLLGLQI+AEKYYFGIRKSLVEFDEVLEVQRKHVY+LRQ IL+G +ESCS+QI
Sbjct: 792 ESNAVVKQLLGLQINAEKYYFGIRKSLVEFDEVLEVQRKHVYNLRQVILSGDSESCSEQI 851
Query: 664 FQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
FQYMQAV D+II GN DP K P W L LL EF ++ G +LD+ F I + LL S+E+
Sbjct: 852 FQYMQAVADDIILGNADPQKPPNTWKLANLLDEFGSLGGTLLDEPFKEIQEEDLLSSLEQ 911
Query: 724 LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRK 783
+ E ++++NF P++P PN FRGI +++SS+ RWLAIC DD +K GRY N+LRK
Sbjct: 912 IHEYGPVNVDNFTLPNMPVSPNSFRGIWKRTSSMMRWLAICVDDASKKGRYTYIVNMLRK 971
Query: 784 YLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
Y GD LIA+YL+ VQESRYDD Y++ +ER +L+KTLD W+DHL+NMN+LSSAVNVRSFG
Sbjct: 972 YFGDFLIATYLDAVQESRYDDAYIRGIEREILLKTLDTLWKDHLVNMNKLSSAVNVRSFG 1031
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
HRNPLEEYKIDGCRFFISML ATRRLTVESL+ YWSSPMES+E+F
Sbjct: 1032 HRNPLEEYKIDGCRFFISMLGATRRLTVESLLHYWSSPMESEEIF 1076
>gi|5263315|gb|AAD41417.1|AC007727_6 Similar to gb|X82404 chloroplast SecA protein from Pisum sativum
[Arabidopsis thaliana]
Length = 977
Score = 1337 bits (3460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/925 (72%), Positives = 733/925 (79%), Gaps = 128/925 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGG VLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 146 MRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EER+ NY CDITYTNNSELGFDYLRDNL +N EQLVM
Sbjct: 206 EWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVM 265
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+++ ARYPVAAKVAELLV+ HY VELK
Sbjct: 266 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELK 325
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
NSVELTEEGI+LAEMALET DLWDENDPWARFVMNALKAKEFY+RDVQYIVR+GKALII
Sbjct: 326 ENSVELTEEGISLAEMALETGDLWDENDPWARFVMNALKAKEFYKRDVQYIVRDGKALII 385
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE+KRRWSEG+HQAVEAKEGL+IQADS+VVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 386 NELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKT 445
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ+PVIEVPTNL NIR+DLPIQ+FATARGKWE+ R+EVE MF GRPVLVG+
Sbjct: 446 EEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGT 505
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLS+LLK+ GIPHNVLNARPKYAAREA+ +AQAGRKYAITISTNMAGRGTDII
Sbjct: 506 TSVENSEYLSELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDII 565
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLA++IIED +L LT E L +DD
Sbjct: 566 LGGNPKMLAREIIEDSILSYLTSEVLADNIDDD--------------------------- 598
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
E+SQ + LI++QS MYPLGP +AL YLSVL
Sbjct: 599 ------------------------ELSQ-------KNLINEQSEMYPLGPAIALAYLSVL 627
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM+SLQDEM
Sbjct: 628 KDCEAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEM 687
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGD IV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 688 FQKFNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVL 747
Query: 638 E------------VQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
E VQRKHVYDLRQ +LTG NESCSQ IFQYMQAVVDEI+ GN +P KHP
Sbjct: 748 EHTYVSTPKRCCRVQRKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHP 807
Query: 686 RYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
RYWSL KLLKEF+AI+G +LD+ +T+L+S+E L E +SI++ + P LPKPPN
Sbjct: 808 RYWSLAKLLKEFMAISGNLLDE-------ETMLQSLENLHEGSSIEMEDLSLPHLPKPPN 860
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
FRGIRRK+SSL+RWL ICSD+LT +G YR NLLRK+L
Sbjct: 861 AFRGIRRKNSSLRRWLDICSDNLTGSGSYRTLINLLRKFL-------------------- 900
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
VL+KTLDC+WRDHL+NMN+LSSAVNVRSF HRNPLEEYKIDGCRFFISMLSA
Sbjct: 901 --------VLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSA 952
Query: 866 TRRLTVESLVQYWSSPMESQELFLS 890
TRRLTVES++QYWSSPMESQELF+S
Sbjct: 953 TRRLTVESILQYWSSPMESQELFIS 977
>gi|125557919|gb|EAZ03455.1| hypothetical protein OsI_25593 [Oryza sativa Indica Group]
Length = 1065
Score = 1332 bits (3448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/945 (68%), Positives = 747/945 (79%), Gaps = 88/945 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 147 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDA 206
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQ GM +ERR+NYRCDITYTNNSELGFDYLRDNL+ N EQLVM
Sbjct: 207 EWMGRVHRFLGLSVGLIQAGMKADERRANYRCDITYTNNSELGFDYLRDNLSRNKEQLVM 266
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP PFHFAIVDEVDSVLIDEGRNPLLISGE ++D ARYPVAAK A+LL++G+HYTVELK
Sbjct: 267 RWPTPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAARYPVAAKAADLLMEGVHYTVELK 326
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+N+++LTE+G+ AEM LETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR+GKALII
Sbjct: 327 SNNIDLTEDGVTCAEMILETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRDGKALII 386
Query: 218 NE----------------------------------LTGRVEEKRRWSEGIHQAVEAKEG 243
NE LTGRVE KRRWS+GIHQAVEAKEG
Sbjct: 387 NEIIMWNLSFKVVMPILQYCIVPINGISIIILTLFELTGRVEPKRRWSDGIHQAVEAKEG 446
Query: 244 LKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVD 303
LKIQ EKEFLKMF+ PVIEVPTNLPNIRVD
Sbjct: 447 LKIQ-------------------------------EKEFLKMFKTPVIEVPTNLPNIRVD 475
Query: 304 LPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNAR 363
LPIQ+FATARGKW+Y R EVESMF LGRPVLVG+TSVE+SEYLSDLLK + IPHNVLNAR
Sbjct: 476 LPIQAFATARGKWQYVRAEVESMFHLGRPVLVGTTSVESSEYLSDLLKARNIPHNVLNAR 535
Query: 364 PKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREAL 423
PKYAAREAE VAQAGRK+AITISTNMAGRGTDIILGGNPKMLAK+IIED +L LT E
Sbjct: 536 PKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAKEIIEDNVLPFLTHEPP 595
Query: 424 NVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM 483
+VE +++S K LS+IKLG SSL LLAKAA++AKYV ++E W +Q+AKS +ESVEM
Sbjct: 596 DVETVGESTSHKGLSKIKLGPSSLGLLAKAAIIAKYVQRSERNEWPFQKAKSTIAESVEM 655
Query: 484 SQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTS 543
S ++ +++LQ + ++S MYPL T+ L YL+VL+DCE+HCS EG+EVK LGGLHVIGTS
Sbjct: 656 SHTIGMEKLQDRLAEESEMYPLCDTIGLAYLTVLRDCEIHCSTEGAEVKALGGLHVIGTS 715
Query: 544 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPI 603
LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMF+KF+ DT WAV LISRITNDED+ I
Sbjct: 716 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFRKFNLDTEWAVRLISRITNDEDIAI 775
Query: 604 EGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQI 663
E +A+V+QLLGLQI+AEKYYFGIRKSLVEFDEVLEVQRKHVY+LRQ IL+G +ESCS+QI
Sbjct: 776 ESNAVVKQLLGLQINAEKYYFGIRKSLVEFDEVLEVQRKHVYNLRQVILSGDSESCSEQI 835
Query: 664 FQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
FQYMQAV D+II GN DP K P W L LL EF ++ G +LD+ F I + LL S+E+
Sbjct: 836 FQYMQAVADDIILGNADPQKPPNTWKLANLLDEFGSLGGTLLDEPFKEIQEEDLLSSLEQ 895
Query: 724 LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRK 783
+ E ++++NF P++P PN FRGI +++SS+ RWLAIC DD +K GRY N+LRK
Sbjct: 896 IHEYGPVNVDNFTLPNMPVSPNSFRGIWKRTSSMMRWLAICVDDASKKGRYTYIVNMLRK 955
Query: 784 YLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
Y GD LIA+YL+ VQESRYDD Y++ +ER +L+KTLD W+DHL+NMN+LSSAVNVRSFG
Sbjct: 956 YFGDFLIATYLDAVQESRYDDAYIRGIEREILLKTLDTLWKDHLVNMNKLSSAVNVRSFG 1015
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
HRNPLEEYKIDGCRFFISML ATRRLTVESL+ YWSSPMES+E+F
Sbjct: 1016 HRNPLEEYKIDGCRFFISMLGATRRLTVESLLHYWSSPMESEEIF 1060
>gi|297850596|ref|XP_002893179.1| preprotein translocase secA family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297339021|gb|EFH69438.1| preprotein translocase secA family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1579
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/792 (78%), Positives = 694/792 (87%), Gaps = 30/792 (3%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGG VLHDGSIAEMKT VVTVNDYLAQRDA
Sbjct: 794 MRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 853
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGLSVGLIQRGM EER+ NY CDITYTNNSELGFDYLRDNL +N EQLVM
Sbjct: 854 EWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVM 913
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA+++ ARYPVAAKVAELLV+ HY VELK
Sbjct: 914 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELK 973
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
NSVELTEEGI+LAEMALET+DLWDENDPWARFVMNALKAKEFY+RDVQYIVR+GKALII
Sbjct: 974 ENSVELTEEGISLAEMALETSDLWDENDPWARFVMNALKAKEFYKRDVQYIVRDGKALII 1033
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
NELTGRVE+KRRWSEG+HQAVEAKEGL+IQADS+VVAQITYQSLFKLYPKLSGMTGTAKT
Sbjct: 1034 NELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKT 1093
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLKMFQ+PVIEVPTNL NIR+DLPIQ+FATARGKWE+ R+EVE MF GRPVLVG+
Sbjct: 1094 EEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGT 1153
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSEYLS+LLK+ GIPHNVLNARPKYAAREA+ +AQAGRKYAITISTNMAGRGTDII
Sbjct: 1154 TSVENSEYLSELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDII 1213
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNPKMLA++IIED +L LT E L +DD S KVLS+IK+G SSLA LA+A+L+A
Sbjct: 1214 LGGNPKMLAREIIEDSILSYLTSEVLADNIDDNELSQKVLSKIKVGPSSLASLARASLMA 1273
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
KYVGK+E KSWT ++AKS +ES+E SQ+M+ +LQ L+++QS MYPLGP +AL YLSVL
Sbjct: 1274 KYVGKSESKSWTRKKAKSVVTESLEKSQTMDPMKLQNLVNEQSEMYPLGPAIALAYLSVL 1333
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
KDCE HC +EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM+SLQDEM
Sbjct: 1334 KDCEAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEM 1393
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
FQKF+FDT WAV LIS+ITNDED+PIEGD IV+QLL LQI+AEKY+FGIRKSLVEFDEVL
Sbjct: 1394 FQKFNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVL 1453
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQRKHVYDLRQ +LTG NESCSQ IFQYMQAVVDEI+ GN +P KHPRYWSL KLLKEF
Sbjct: 1454 EVQRKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNANPQKHPRYWSLAKLLKEF 1513
Query: 698 IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
+AI+G +LD+ +T+L+S+E L E +SID+ + Y P LPKPPN FRGIRRK+SSL
Sbjct: 1514 MAISGNLLDE-------ETMLQSLENLHERSSIDMEDLYLPHLPKPPNAFRGIRRKNSSL 1566
Query: 758 KRWLAICSDDLT 769
+RWL ICSD+LT
Sbjct: 1567 RRWLDICSDNLT 1578
>gi|168065934|ref|XP_001784900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663530|gb|EDQ50289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1019
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/917 (57%), Positives = 630/917 (68%), Gaps = 128/917 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLH+G+IAEM+T VVTVNDYLAQRD
Sbjct: 180 MRHFDVQIIGGAVLHNGAIAEMRTGEGKTLVSPLAAYLNSLSGEGVHVVTVNDYLAQRDG 239
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+HRFLGLSVGLIQ GM P ERR+ Y CDITY+NNSELGFDYLRDN++ E LVM
Sbjct: 240 EWMGRIHRFLGLSVGLIQSGMEPAERRAAYACDITYSNNSELGFDYLRDNISDKEEDLVM 299
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWPKPF+FAIVDEVDSVLIDEGRNPLLIS ++SKD RYP AA+VA LL+ HY V +K
Sbjct: 300 RWPKPFNFAIVDEVDSVLIDEGRNPLLISTQSSKDAGRYPAAAEVAALLIPDFHYKVNIK 359
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
S++LTEEG+A AE+AL+T DLWD+ DPWARFV+ ALKAKEF+ RDV YIV++G+ I+
Sbjct: 360 EKSLDLTEEGVAAAELALDTQDLWDDKDPWARFVITALKAKEFHIRDVHYIVKDGQIQIV 419
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV E RRWSEGIHQAVEAKEG+ IQADS+ VAQITYQS FKLYPKLSGMTGTAKT
Sbjct: 420 DEFTGRVVENRRWSEGIHQAVEAKEGVHIQADSMTVAQITYQSFFKLYPKLSGMTGTAKT 479
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EFLKMF+MPV+EVPTNLPNIR DLP+Q F T RGKW+ R+EV M+ GRPVLVG+
Sbjct: 480 EEAEFLKMFKMPVVEVPTNLPNIRQDLPLQLFPTTRGKWDRVREEVSLMYSQGRPVLVGT 539
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LSDLL++ GIPHN+LNARPKYAAREAE VAQAGR+ AITI+TNMAGRGTDII
Sbjct: 540 TSVEQSEHLSDLLQEWGIPHNILNARPKYAAREAEIVAQAGRRNAITIATNMAGRGTDII 599
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP+MLAK+I+E RLL LT + NV+ D S LS+I
Sbjct: 600 LGGNPEMLAKEIVESRLLGFLTSDGPNVDTDGAPLSQMALSKI----------------- 642
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
EG +E + + ++ L L L
Sbjct: 643 ------EG------------AEIITLGPTIALAYLSTL---------------------- 662
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
++C+VHC NEG+EVKRLGGLHVIGT+LHESRRIDNQLRGRA RQGDPGSTRFM+SL+DEM
Sbjct: 663 RECQVHCRNEGTEVKRLGGLHVIGTALHESRRIDNQLRGRAARQGDPGSTRFMISLEDEM 722
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
F+K F+T WA ++ R+ +E++P+E ++ +QLL LQ +AE+YYFGIRKSLVEFDEVL
Sbjct: 723 FRK--FNTDWANSIVLRLGLEENVPLEYGSLTKQLLSLQTAAERYYFGIRKSLVEFDEVL 780
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
EVQR HVY LRQS+L +S Q++ QYMQAV DE++ V P K P W LD +L+EF
Sbjct: 781 EVQRNHVYTLRQSLLLDDADSTHQRLLQYMQAVADEMVLAYVHPSKPPTAWELDSVLEEF 840
Query: 698 IAIAGKI----------------LDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLP 741
+ K D+ +G++ L IE L +D++ P LP
Sbjct: 841 HDLCYKTSGRQQNSDEHQTPYVSHSDVLSGVTSAML---IEGLRHCEKVDVDFLKLPGLP 897
Query: 742 KPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESR 801
P R +R K+ S+ RW+ I SD + G+Y +LLRKY+
Sbjct: 898 MPFEGHRNLRFKAGSISRWMDIISDPAAERGKYDREVHLLRKYV---------------- 941
Query: 802 YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFIS 861
AV + LD +WRDHL+NMNRL +AVNVR FGH NPLEEYKIDGCRFFIS
Sbjct: 942 -----------AVALNALDRYWRDHLVNMNRLRAAVNVRCFGHMNPLEEYKIDGCRFFIS 990
Query: 862 MLSATRRLTVESLVQYW 878
MLSA RR TVESL++ W
Sbjct: 991 MLSAARRTTVESLLRPW 1007
>gi|317106681|dbj|BAJ53183.1| JMS09K11.1 [Jatropha curcas]
Length = 581
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/581 (82%), Positives = 527/581 (90%)
Query: 190 FVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQAD 249
FVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQAD
Sbjct: 1 FVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQAD 60
Query: 250 SVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSF 309
SVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVI+VPTNLPNIR DLPIQ+F
Sbjct: 61 SVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIDVPTNLPNIRKDLPIQAF 120
Query: 310 ATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAR 369
ATARGKWE+ RQE+E MFR GRPVLVG+TSVENSEYLSDLLKQ IPHNVLNARPKYAA+
Sbjct: 121 ATARGKWEHVRQEIEYMFRQGRPVLVGTTSVENSEYLSDLLKQWKIPHNVLNARPKYAAK 180
Query: 370 EAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDD 429
EAE +AQAGRKYAITISTNMAGRGTDIILGGNPKMLAK+I+EDRLL LTRE +VEVD
Sbjct: 181 EAEIIAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKEIVEDRLLSHLTRETPDVEVDG 240
Query: 430 KTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNL 489
+T S KV+S IK+G +SLALL ++AL+AKYVGK+EGK+WTYQEAKS SESVEMSQSM++
Sbjct: 241 ETMSRKVMSNIKVGLTSLALLGRSALMAKYVGKSEGKNWTYQEAKSMISESVEMSQSMDV 300
Query: 490 KELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRR 549
KELQ L ++QS YPLGPT+AL YLSVLKDCE+HC EGSEVKRLGGLHV GTSLHESRR
Sbjct: 301 KELQMLANEQSEFYPLGPTIALAYLSVLKDCEMHCLCEGSEVKRLGGLHVTGTSLHESRR 360
Query: 550 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIV 609
IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKF+FDT WAV LISRITNDED+PIEGDAIV
Sbjct: 361 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVRLISRITNDEDIPIEGDAIV 420
Query: 610 RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQA 669
+QLL LQI+AEKY+FGIRKSLV+FDEVLEVQRKHVY+LRQ ILTG +ESC+Q I QYMQA
Sbjct: 421 KQLLALQINAEKYFFGIRKSLVDFDEVLEVQRKHVYNLRQLILTGDSESCAQHISQYMQA 480
Query: 670 VVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNS 729
VVDE++ GN DPLKHPR W+LDKLLKEFI I G++LDD FAGI+ + LLKS+ +L +
Sbjct: 481 VVDELVLGNADPLKHPRSWNLDKLLKEFITIGGELLDDSFAGITKEALLKSLLQLHGSSY 540
Query: 730 IDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTK 770
IDI +FY P+LPKPPN FRGIRRK SLK WL ICSD+LT+
Sbjct: 541 IDIYDFYLPNLPKPPNAFRGIRRKCYSLKHWLTICSDELTE 581
>gi|302792431|ref|XP_002977981.1| hypothetical protein SELMODRAFT_176627 [Selaginella moellendorffii]
gi|300154002|gb|EFJ20638.1| hypothetical protein SELMODRAFT_176627 [Selaginella moellendorffii]
Length = 942
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/913 (55%), Positives = 642/913 (70%), Gaps = 52/913 (5%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLHDGSIAEMKT V+TVNDYLAQRDA
Sbjct: 47 MRHFDVQIVGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVITVNDYLAQRDA 106
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++++FLGLSVGL++ + PEER++ Y CDITY NNSE FDYLRD+ + E++VM
Sbjct: 107 EWMGQIYKFLGLSVGLVKSSLEPEERKAAYACDITYGNNSEFIFDYLRDHTCSTKEEMVM 166
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP+P HFA+VDE+DSVLIDEGRNP L+S E+SK+ +RYPVAA+VA+ L+ HYTV+ K
Sbjct: 167 RWPRPLHFAVVDEIDSVLIDEGRNPFLLSSESSKNASRYPVAAEVADFLIVDRHYTVQQK 226
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+VELTEEG+A+AE+AL +LWD DPWARFV+ ALKAKE Y RDV YIVR+GK I+
Sbjct: 227 QKTVELTEEGVAMAELALGIENLWDGKDPWARFVVTALKAKECYFRDVDYIVRDGKVQIV 286
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+GIHQAVEAKEG+KI ++V+ A +TYQS FKLY K+SGMTGTAKT
Sbjct: 287 DEFTGRVATNRRWSDGIHQAVEAKEGVKINPETVMSAHMTYQSYFKLYSKVSGMTGTAKT 346
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLK+F MPV+EVPTNLPNIRVDLP+ F TARGKW R+E+E M GRPVLVG+
Sbjct: 347 EEKEFLKLFNMPVVEVPTNLPNIRVDLPLHIFPTARGKWRRVREEIEIMHAQGRPVLVGT 406
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL + IPHNVLNAR KYAAREAE VAQAGRK AITI+TNMAGRGTDII
Sbjct: 407 TSVEESELLSALLHEHNIPHNVLNARAKYAAREAEIVAQAGRKSAITIATNMAGRGTDII 466
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP+MLAK+I++ R+L + ++ +VE D S K LS IKL S + + +A A
Sbjct: 467 LGGNPEMLAKEILQRRILPFMASDSPDVETDGAPLSQKGLSTIKLSGVSFSRIFRACAAA 526
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSA----MYPLGPTVALTY 513
K V + G+ ++Y+EAK + + + + ++ +LID S LGP++AL
Sbjct: 527 KVVCGSGGEVFSYREAK---DKLLYVFNNARFEDEDRLIDLASGSGAETLSLGPSIALAC 583
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
LSVL+DC +C EG+EVKRLGGLHVIGT+LHESRRIDNQLRGRAGRQGDPGSTRFM+S
Sbjct: 584 LSVLRDCRAYCLLEGNEVKRLGGLHVIGTALHESRRIDNQLRGRAGRQGDPGSTRFMISF 643
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR-QLLGLQISAEKYYFGIRKSLVE 632
+D+M QK+ + ++ + + ED+ + G I R Q+L +Q S EKY+ G+R+ +VE
Sbjct: 644 EDDMLQKYGGELAYK---LMKAVGVEDVDV-GSGITRHQVLSIQTSVEKYFSGVRRHMVE 699
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D VLEV R HV+ LR++ + G +SC Q +QY+Q V DE++ +VDP K PR W+L+
Sbjct: 700 YDAVLEVHRSHVFKLREAFVMGTFDSCQQLFYQYIQGVADEMVLNHVDPTKPPRNWNLEG 759
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY--FPDLPKPPNLFRGI 750
L EF A FA G LL ++ + ++++ + P LP P L G
Sbjct: 760 FLDEFDDFASVT----FAFPRGSHLLSNVTKETIVSALSTSRLMKELPGLP-PTGLDAGD 814
Query: 751 R-RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASY---LNVVQESRYDDVY 806
K++SL RW DD +GR+ + R+Y+GDILIA Y L +QE R D
Sbjct: 815 SPMKAASLSRWK---RDDFLPSGRHCQELDSFRRYVGDILIAEYQRKLESIQEFRED--- 868
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+VER+V + LD FWR HL NM+RLSSAV + FGH NPL+EYK+DG RFFI MLSA
Sbjct: 869 ANQVERSVAISALDYFWRMHLANMSRLSSAVQITGFGHMNPLDEYKLDGARFFIKMLSAA 928
Query: 867 RRLTVESLVQYWS 879
RR+TVESL++ W+
Sbjct: 929 RRMTVESLLKPWA 941
>gi|302766695|ref|XP_002966768.1| hypothetical protein SELMODRAFT_85961 [Selaginella moellendorffii]
gi|300166188|gb|EFJ32795.1| hypothetical protein SELMODRAFT_85961 [Selaginella moellendorffii]
Length = 885
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/907 (49%), Positives = 575/907 (63%), Gaps = 130/907 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLHDGSIAEMKT V+TVNDYLAQRDA
Sbjct: 80 MRHFDVQIVGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVITVNDYLAQRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++++FLGLSVGL++ + PEER++ Y CDITY NNSE FDYLRD+ + E++VM
Sbjct: 140 EWMGQIYKFLGLSVGLVKSSLEPEERKAAYACDITYGNNSEFIFDYLRDHTCSTKEEMVM 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP+P HFA+VDE+DSVLIDEGRNP L+S E+SK+ +RYPVAA+VA+ L+ HYTV+ K
Sbjct: 200 RWPRPLHFAVVDEIDSVLIDEGRNPFLLSSESSKNASRYPVAAEVADFLIVDRHYTVQQK 259
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+VELTEEG+A+AE+AL +LWD DPWARFV+ ALKAKE Y RDV YIVR+GK I+
Sbjct: 260 QKTVELTEEGVAMAELALGIENLWDGKDPWARFVVTALKAKECYFRDVDYIVRDGKVQIV 319
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+GIHQAVEAKEG+KI ++V+ A +TYQS FKLY K+SGMTGTAKT
Sbjct: 320 DEFTGRVATNRRWSDGIHQAVEAKEGVKINPETVMSAHMTYQSYFKLYSKVSGMTGTAKT 379
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEFLK+F MPV+EVPTNLPNIRVDLP+ F TARGKW R+E+E M GRPVLVG+
Sbjct: 380 EEKEFLKLFNMPVVEVPTNLPNIRVDLPLHIFPTARGKWRRVREEIEIMHAQGRPVLVGT 439
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL + IPHNVLNAR KYAAREAE VAQ AGR + I
Sbjct: 440 TSVEESELLSALLHEHNIPHNVLNARAKYAAREAEIVAQ-------------AGRKSAIT 486
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
+ N II +P++L++ L L +A
Sbjct: 487 IATNMAGRGTDII-------------------LGGNPEMLAKEILQRRILPFMA------ 521
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
++ ++ +SQ K+ + LGP++AL LSVL
Sbjct: 522 -------------SDSPDVETDGAPLSQ--------KVCGSGAETLSLGPSIALACLSVL 560
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
+DC +C EG+EVKRLGGLHVIGT+LHESRRIDNQLRGRAGRQGDPGSTRFM+S +D+M
Sbjct: 561 RDCRAYCLLEGNEVKRLGGLHVIGTALHESRRIDNQLRGRAGRQGDPGSTRFMISFEDDM 620
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR-QLLGLQISAEKYYFGIRKSLVEFDEV 636
QK+ + ++ + + ED+ + G I R Q+L +Q S EKY+ G+R+ +VE+D V
Sbjct: 621 LQKYGGELAYK---LMKAVGVEDVDV-GSGITRHQVLSIQTSVEKYFSGVRRHMVEYDAV 676
Query: 637 LEVQ---RKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
LEV+ R HV+ LR++ + G +SC Q +QY+Q V DE++ +VDP K PR W+L+
Sbjct: 677 LEVKIVHRSHVFKLREAFVMGTFDSCQQLFYQYIQGVADEMVLNHVDPTKPPRNWNLEGF 736
Query: 694 LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR-R 752
L EF A DL + +S + ++ ++ + + P LP P L G
Sbjct: 737 LDEFDDFASSC-SDLLSNVSKEMIVSALSTSRLMKEL-------PGLP-PTGLDTGDSPM 787
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
K++SL RW DD +GR+ + R+Y R
Sbjct: 788 KAASLSRWK---RDDFLPSGRHCQELDSFRRY---------------------------R 817
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE 872
+V + LD FWR HL NM+RLSSAV + FGH NPL+EYK+DG RFFI MLSA RR+TVE
Sbjct: 818 SVAISALDYFWRMHLANMSRLSSAVQITGFGHMNPLDEYKLDGARFFIKMLSAARRMTVE 877
Query: 873 SLVQYWS 879
SL++ W+
Sbjct: 878 SLLKPWA 884
>gi|209523661|ref|ZP_03272215.1| preprotein translocase, SecA subunit [Arthrospira maxima CS-328]
gi|376004262|ref|ZP_09781998.1| Preprotein translocase subunit secA [Arthrospira sp. PCC 8005]
gi|423065953|ref|ZP_17054743.1| preprotein translocase SecA subunit [Arthrospira platensis C1]
gi|209496066|gb|EDZ96367.1| preprotein translocase, SecA subunit [Arthrospira maxima CS-328]
gi|375327352|emb|CCE17751.1| Preprotein translocase subunit secA [Arthrospira sp. PCC 8005]
gi|406712452|gb|EKD07637.1| preprotein translocase SecA subunit [Arthrospira platensis C1]
Length = 929
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/916 (41%), Positives = 532/916 (58%), Gaps = 108/916 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 MRHFDVQVLGGMILHKGEIAEMKTGEGKTLVSTLPAYLNGLSGHGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM PEER+ NY CDITY NSE+GFDYLRDN+A + E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQGMGPEERKKNYSCDITYATNSEVGFDYLRDNMATSMEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-HYTVEL 156
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA+VA+ L + HY V+
Sbjct: 204 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPSEKYMRAAEVAKALQKDKEHYEVDE 260
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LT+EG A AE L DL+D NDPWA FV NALKAKE + +DV YIVR+ + +I
Sbjct: 261 KARNVLLTDEGFAAAEEFLGVKDLYDPNDPWAHFVFNALKAKELFIKDVNYIVRDDEVVI 320
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV + RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKLSGMTGTAK
Sbjct: 321 VDEFTGRVMQGRRWSDGLHQAIEAKEGVEIQPETQTLATITYQNFFLLYPKLSGMTGTAK 380
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE E K++ + V VPTN P R DL + T +GKW E M +GRPVLVG
Sbjct: 381 TEEAEIEKIYNLQVTVVPTNRPTARADLSDMVYKTEQGKWLAIATECAQMHNMGRPVLVG 440
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LL QQ +PHN+LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDI
Sbjct: 441 TTSVEKSELLSGLLSQQEVPHNLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDI 500
Query: 397 ILGGNPKMLAKKIIEDRLL--LLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
ILGGN +A+ + + + ++ ++ + + P+ K + A K
Sbjct: 501 ILGGNADYMARLKLREYFMPRIVKPQDERELAIPQIGGGPR---RNKPQGFAAADKPKVW 557
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKEL--QKLIDKQSAMYPLGPTVAL- 511
+A + E T ++ +S +V + ++ EL + ++ S P V
Sbjct: 558 KVAAGIFPTELSVETQEKLRSAVDFAVSVYGERSVPELMAEDILAVASEKAPTTDVVVQR 617
Query: 512 ---TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTR 568
Y +++ + EV E EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGSTR
Sbjct: 618 IREVYQAIVAEYEVFTHEEHDEVVSLGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTR 677
Query: 569 FMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRK 628
F +SL+D + + F + A +++ +ED+PIE + R L Q E YY+ IRK
Sbjct: 678 FFLSLEDNLLRIFGGERVAA--MMTAFQVEEDLPIESKLLTRSLENAQKKVETYYYDIRK 735
Query: 629 SLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
+ E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D+I+ ++P W
Sbjct: 736 QVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYGEKTMDDIVEAYINPDLPSEEW 793
Query: 689 SLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
L+ L +KEF+ +L DL + E+L ++ +I F + L
Sbjct: 794 DLETLVAKVKEFVY----LLKDL-----------TSEQLFDMTVEEIKTFLYEQL----- 833
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
R + +K A N +R L
Sbjct: 834 ------RNAYDIK----------------EAQVNQIRPGL-------------------- 851
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F+ M++
Sbjct: 852 -MRDAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLVEYKREGYELFLDMMTD 910
Query: 866 TRRLTVESLVQYWSSP 881
RR + S+ Q+ P
Sbjct: 911 IRRNVIYSMFQFQPQP 926
>gi|428203382|ref|YP_007081971.1| Preprotein translocase subunit SecA [Pleurocapsa sp. PCC 7327]
gi|427980814|gb|AFY78414.1| preprotein translocase, SecA subunit [Pleurocapsa sp. PCC 7327]
Length = 936
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/917 (41%), Positives = 533/917 (58%), Gaps = 120/917 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 85 MRHFDVQLLGGIVLHQGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNDYLARRDA 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEE++ NY CDITYT NSELGFDYLRDN+A + ++V
Sbjct: 145 EWMGQVHRFLGLSVGLIQAGMNPEEKKRNYACDITYTTNSELGFDYLRDNMAPSMSEVVQ 204
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R PF++ I+DEVDS+LIDE R PL+ISG+ + +Y AA++A+ LV+ +
Sbjct: 205 R---PFNYCIIDEVDSILIDEARTPLIISGQIERPTEKYLKAAEIAQQLVKQVDESQPGD 261
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K ++ +T+EG AE L DL+D+N+PWA ++ NA+KAKE + +DV YIVRN
Sbjct: 262 YEVDEKARNILMTDEGFEKAEQLLGVQDLYDQNNPWAHYIFNAIKAKELFIKDVNYIVRN 321
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 322 GEVVIVDEFTGRVLPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNFFLLYPKLSGM 381
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN P+ R D+P + RGKW +E E M ++GR
Sbjct: 382 TGTAKTEETELEKVYNLQVTVIPTNRPSRRYDMPDVVYKNERGKWIAVAEECEEMHKIGR 441
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 442 PVLVGTTSVEKSELLSRLLQEKKIPHNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 501
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDK--TSSPKVLSEIKLGSSSLAL 449
RGTDIILGGN +A+ I + L+ + R E DD S P V + +
Sbjct: 502 RGTDIILGGNADYMARLKIREYLMPKIVRP----EDDDALGVSVPGVGGRNRPQGFAPGK 557
Query: 450 LAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK----LIDKQSAMY-- 503
K + + E T + K +V+ +L EL+ I ++A
Sbjct: 558 KVKTWKASPQIFPTELSKDTQKLLKDVVKFAVDQYGEQSLTELEAEEKVAIAAENAPVDD 617
Query: 504 PLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGD 563
P+ + Y + ++ E + S E EV LGGLHVIGT HESRRIDNQLRGRA RQGD
Sbjct: 618 PVIQKLREAYKLIRREYEEYTSREHDEVVELGGLHVIGTERHESRRIDNQLRGRAARQGD 677
Query: 564 PGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYY 623
PGSTRF +SL+D + + F D L++ + +EDMPIE + L G Q E YY
Sbjct: 678 PGSTRFFLSLEDNLLRIFGGDR--VAGLMTALRVEEDMPIESKMLTGSLEGAQKKVETYY 735
Query: 624 FGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK 683
+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +DEI+ V+P
Sbjct: 736 YDIRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYAEKTMDEIVDAYVNPEL 793
Query: 684 HPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
P W L+ L+ KEF+ +L+D+ + ++ +++ +I NF ++
Sbjct: 794 PPEEWDLEGLVNKAKEFVY----LLEDV-----------EVSDIADMSVSEIKNFLHEEV 838
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQES 800
RK+ +K E
Sbjct: 839 -----------RKAYDIK----------------------------------------ED 847
Query: 801 RYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+ D V M+E ER +++ +D WR+HL M+ L ++ +R +G ++PL EYK +G
Sbjct: 848 QVDKVRPGLMREAERFFILQQIDTLWREHLQAMDALRESIGLRGYGQKDPLIEYKQEGYE 907
Query: 858 FFISMLSATRRLTVESL 874
F+ M+ RR V SL
Sbjct: 908 MFLEMMIDIRRNVVYSL 924
>gi|291570621|dbj|BAI92893.1| preprotein translocase SecA subunit [Arthrospira platensis NIES-39]
Length = 929
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/916 (41%), Positives = 532/916 (58%), Gaps = 108/916 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 MRHFDVQVLGGMILHKGEIAEMKTGEGKTLVSTLPAYLNGLSGHGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM PEER+ NY CDITY NSE+GFDYLRDN+A + E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQGMGPEERKKNYSCDITYATNSEVGFDYLRDNMATSMEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-HYTVEL 156
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA+VA+ L + HY V+
Sbjct: 204 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPSEKYMRAAEVAKGLQKDKDHYEVDE 260
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LT+EG A AE L DL+D NDPWA FV NALKAKE + +DV YIVR+ + +I
Sbjct: 261 KARNVLLTDEGFAAAEEFLGVKDLYDPNDPWAHFVFNALKAKELFIKDVNYIVRDDEVVI 320
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV + RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGMTGTAK
Sbjct: 321 VDEFTGRVMQGRRWSDGLHQAIEAKEAVEIQPETQTLATITYQNFFLLYPKLSGMTGTAK 380
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE E K++ + V VPTN P R DL + T +GKW E M +GRPVLVG
Sbjct: 381 TEEAEIEKIYSLQVTVVPTNRPTARADLSDMVYKTEQGKWLAIATECAQMHNMGRPVLVG 440
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LL QQ +PHN+LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDI
Sbjct: 441 TTSVEKSELLSGLLSQQEVPHNLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDI 500
Query: 397 ILGGNPKMLAKKIIEDRLL--LLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
ILGGN +A+ + + + ++ ++ + + P+ K + A K
Sbjct: 501 ILGGNADYMARLKLREYFMPRIVKPQDERELAIPQIGGGPR---RNKPQGFAAADKPKVW 557
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQ--KLIDKQSAMYPLGPTVAL- 511
+A + E T ++ +S +V + ++ ELQ ++ S P V
Sbjct: 558 KVAAGIFPTELSVDTQEKLRSAVDFAVSVYGERSVPELQAEDILAVASEKAPTTDVVVQR 617
Query: 512 ---TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTR 568
Y +++ + EV E +EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGSTR
Sbjct: 618 IREVYQAIVAEYEVFTHEEHNEVVSLGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTR 677
Query: 569 FMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRK 628
F +SL+D + + F + A +++ +ED+PIE + R L Q E YY+ IRK
Sbjct: 678 FFLSLEDNLLRIFGGERVAA--MMTAFQVEEDLPIESKLLTRSLENAQKKVETYYYDIRK 735
Query: 629 SLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
+ E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D+I+ ++P W
Sbjct: 736 QVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYGEKTMDDIVEAYINPDLPSEEW 793
Query: 689 SLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
L+ L +KEF+ +L DL A E+L ++ +I F + L
Sbjct: 794 DLETLVAKVKEFVY----LLKDLAA-----------EQLFDMTVEEIKTFLYEQL----- 833
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
R + +K A N +R L
Sbjct: 834 ------RNAYDIK----------------EAQVNQIRPGL-------------------- 851
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F+ M++
Sbjct: 852 -MRDAERFFILQQIDSLWREHLQQMDALRESVGLRGYGQKDPLVEYKREGYELFLDMMTD 910
Query: 866 TRRLTVESLVQYWSSP 881
RR + S+ Q+ P
Sbjct: 911 IRRNVIYSMFQFQPQP 926
>gi|409991991|ref|ZP_11275208.1| preprotein translocase subunit SecA [Arthrospira platensis str.
Paraca]
gi|409937138|gb|EKN78585.1| preprotein translocase subunit SecA [Arthrospira platensis str.
Paraca]
Length = 929
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/916 (41%), Positives = 531/916 (57%), Gaps = 108/916 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 MRHFDVQVLGGMILHKGEIAEMKTGEGKTLVSTLPAYLNGLSGHGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM PEER+ NY CDITY NSE+GFDYLRDN+A + E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQGMGPEERKKNYSCDITYATNSEVGFDYLRDNMATSMEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-HYTVEL 156
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA+VA+ L + HY V+
Sbjct: 204 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPSEKYMRAAEVAKGLQKDKDHYEVDE 260
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LT+EG A AE L DL+D NDPWA FV NALKAKE + +DV YIVR+ + +I
Sbjct: 261 KARNVLLTDEGFAAAEEFLGVKDLYDPNDPWAHFVFNALKAKELFIKDVNYIVRDDEVVI 320
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV + RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGMTGTAK
Sbjct: 321 VDEFTGRVMQGRRWSDGLHQAIEAKEAVEIQPETQTLATITYQNFFLLYPKLSGMTGTAK 380
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE E K++ + V VPTN P R DL + T +GKW E M +GRPVLVG
Sbjct: 381 TEEAEIEKIYSLQVTVVPTNRPTARADLSDMVYKTEQGKWLAIATECAQMHNMGRPVLVG 440
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LL QQ +PHN+LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDI
Sbjct: 441 TTSVEKSELLSGLLSQQEVPHNLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDI 500
Query: 397 ILGGNPKMLAKKIIEDRLL--LLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
ILGGN +A+ + + + ++ ++ + + P+ K + A K
Sbjct: 501 ILGGNADYMARLKLREYFMPRIVKPQDERELAIPQIGGGPR---RNKPQGFAAADKPKVW 557
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQ--KLIDKQSAMYPLGPTVAL- 511
+A + E T ++ +S +V + ++ ELQ ++ S P V
Sbjct: 558 KVAAGIFPTELSVDTQEKLRSAVDFAVSVYGERSVPELQAEDILAVASEKAPTTDVVVQR 617
Query: 512 ---TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTR 568
Y +++ + EV E EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGSTR
Sbjct: 618 IREVYQAIVAEYEVFTHEEHDEVVSLGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTR 677
Query: 569 FMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRK 628
F +SL+D + + F + A +++ +ED+PIE + R L Q E YY+ IRK
Sbjct: 678 FFLSLEDNLLRIFGGERVAA--MMTAFQVEEDLPIESKLLTRSLENAQKKVETYYYDIRK 735
Query: 629 SLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
+ E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D+I+ ++P W
Sbjct: 736 QVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYGEKTMDDIVEAYINPDLPSEEW 793
Query: 689 SLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
L+ L +KEF+ +L DL A E+L ++ +I F + L
Sbjct: 794 DLETLVAKVKEFVY----LLKDLAA-----------EQLFDMTVEEIKTFLYEQL----- 833
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
R + +K A N +R L
Sbjct: 834 ------RNAYDIK----------------EAQVNQIRPGL-------------------- 851
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F+ M++
Sbjct: 852 -MRDAERFFILQQIDSLWREHLQQMDALRESVGLRGYGQKDPLVEYKREGYELFLDMMTD 910
Query: 866 TRRLTVESLVQYWSSP 881
RR + S+ Q+ P
Sbjct: 911 IRRNVIYSMFQFQPQP 926
>gi|16331549|ref|NP_442277.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803]
gi|383323291|ref|YP_005384145.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326460|ref|YP_005387314.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492344|ref|YP_005410021.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437612|ref|YP_005652337.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803]
gi|451815701|ref|YP_007452153.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803]
gi|2500722|sp|Q55709.1|SECA_SYNY3 RecName: Full=Protein translocase subunit SecA
gi|1001616|dbj|BAA10347.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803]
gi|339274645|dbj|BAK51132.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803]
gi|359272611|dbj|BAL30130.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275781|dbj|BAL33299.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278951|dbj|BAL36468.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960824|dbj|BAM54064.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803]
gi|451781670|gb|AGF52639.1| preprotein translocase SecA subunit [Synechocystis sp. PCC 6803]
Length = 932
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/926 (41%), Positives = 530/926 (57%), Gaps = 141/926 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIILHKGQIAEMKTGEGKTLVATLPSYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL+VGL+Q GM PEER+ NY CDITYT NSELGFDYLRDN++ ++V
Sbjct: 144 EWMGQIHRFLGLTVGLVQSGMNPEERKKNYACDITYTTNSELGFDYLRDNMSTAMIEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+LIDE R PL+ISG+ + +Y A+ +A L +HY V+ K
Sbjct: 204 R---PFNFCIIDEVDSILIDEARTPLIISGQVERPTEKYLQASDIAAQLEPEIHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +T+EG AE L+T DL+D+NDPWA ++ NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 261 QRNVLMTDEGFEKAEQLLQTTDLFDKNDPWAHYIFNAIKAKELFLKDVNYIVRNGEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQA+EAKE ++IQ +S +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 321 DEFTGRIMVGRRWSDGLHQAIEAKERVEIQKESQTLATITYQNFFLLYPKLSGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + V PTN P+ R D P + KW+ E E + + GRP+LVG+
Sbjct: 381 EETELEKVYNLQVTITPTNRPSSRQDWPDVVYKNEEAKWKAVALECEELHQQGRPILVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE +S LL+ GI HN+LNARP+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 441 TSVEKSEVISRLLQSSGIHHNLLNARPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA---KAA 454
LGGN +A+ + + L+ + R DD +LG+ ++ K
Sbjct: 501 LGGNSDYMARLKVREYLMPKIVRPE-----DD-----------ELGAGVTGWVSGREKPQ 544
Query: 455 LLAKYVGKAEGKSWTY----------QEAKSFFSESVEMS-QSMNLKELQKL--IDKQSA 501
GK + K+W QE + ++V+ + L+ L +L DK +
Sbjct: 545 GFGNQNGKKKVKTWQVSPDIYPTTISQETEDLLKKAVKFAVDQYGLQSLTELEAEDKLAI 604
Query: 502 MYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
GPT + Y + ++ EV S E EV LGGLHVIGT HESRR+DNQL
Sbjct: 605 ASEKGPTDDPVILKLREVYNQIRREYEVLTSAEHKEVVELGGLHVIGTERHESRRVDNQL 664
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + L G
Sbjct: 665 RGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNMFRVEEDMPIESKMLTGSLEG 722
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E YY+ IRK + E+DEV+ QRK +Y R+ +L G + +Q+ Y + +DEI
Sbjct: 723 AQKKVETYYYDIRKQVFEYDEVMNNQRKAIYAERRRVLEGLD--LKEQVLVYAEKTMDEI 780
Query: 675 IFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSID 731
+ V+P P W ++ +L K+F+ +L+DL ++E+L ++ +
Sbjct: 781 VDAYVNPELPPEEWDVENMLDKAKQFVY----LLEDL-----------TVEDLGDMTVWE 825
Query: 732 INNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIA 791
+ F+ ++ RK+ LK
Sbjct: 826 MKTFFHEEV-----------RKAYDLK--------------------------------- 841
Query: 792 SYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
E++ D V M+E ER +++ +D WR+HL +M L ++ +R +G ++PL
Sbjct: 842 -------ETQVDKVRPGLMREAERYFILQQIDNLWREHLQSMEALRESIGLRGYGQKDPL 894
Query: 849 EEYKIDGCRFFISMLSATRRLTVESL 874
EYK +G F+ M+ RR V SL
Sbjct: 895 IEYKQEGYEMFLEMMIDIRRNVVYSL 920
>gi|56751232|ref|YP_171933.1| preprotein translocase subunit SecA [Synechococcus elongatus PCC
6301]
gi|81299100|ref|YP_399308.1| preprotein translocase subunit SecA [Synechococcus elongatus PCC
7942]
gi|2500721|sp|Q55357.1|SECA_SYNE7 RecName: Full=Protein translocase subunit SecA
gi|81676890|sp|Q5N2Q7.1|SECA_SYNP6 RecName: Full=Protein translocase subunit SecA
gi|625544|pir||JC2190 preprotein translocase secA - Synechococcus sp
gi|505310|emb|CAA52669.1| SecA protein [Synechococcus elongatus PCC 7942]
gi|56686191|dbj|BAD79413.1| preprotein translocase SecA subunit [Synechococcus elongatus PCC
6301]
gi|81167981|gb|ABB56321.1| protein translocase subunit secA [Synechococcus elongatus PCC 7942]
Length = 948
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/946 (41%), Positives = 537/946 (56%), Gaps = 156/946 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG +LHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 85 LRHFDVQMIGGMILHDGQIAEMKTGEGKTLVATLPSYLNALSGKGAHVVTVNDYLARRDA 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM PEERR NY CDITY NSELGFDYLRDN+AA E++V
Sbjct: 145 EWMGQVHRFLGLSVGLIQQGMSPEERRRNYNCDITYATNSELGFDYLRDNMAAVIEEVVQ 204
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R PF++A++DEVDS+LIDE R PL+ISG+ + +Y A++VA LL + +
Sbjct: 205 R---PFNYAVIDEVDSILIDEARTPLIISGQVDRPSEKYMRASEVAALLQRSTNTDSEEE 261
Query: 152 ----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQY 207
Y V+ K +V LT++G AE L +DL+D NDPWA ++ NA+KAKE + +DV Y
Sbjct: 262 PDGDYEVDEKGRNVLLTDQGFINAEQLLGVSDLFDSNDPWAHYIFNAIKAKELFIKDVNY 321
Query: 208 IVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK 267
IVR G+ +I++E TGRV RRWS+G+HQAVE+KEG++IQ ++ +A ITYQ+ F LYPK
Sbjct: 322 IVRGGEIVIVDEFTGRVMPGRRWSDGLHQAVESKEGVEIQPETQTLASITYQNFFLLYPK 381
Query: 268 LSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMF 327
LSGMTGTAKTEE EF K +++ V VPTN + R D P + T GKW + +
Sbjct: 382 LSGMTGTAKTEELEFEKTYKLEVTVVPTNRVSRRRDQPDVVYKTEIGKWRAIAADCAELH 441
Query: 328 RLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIST 387
GRPVLVG+TSVE SE+LS LL +QGIPHN+LNA+P+ REAE VAQAGR+ A+TIST
Sbjct: 442 AEGRPVLVGTTSVEKSEFLSQLLNEQGIPHNLLNAKPENVEREAEIVAQAGRRGAVTIST 501
Query: 388 NMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLS--EIKLGSS 445
NMAGRGTDIILGGN +A+ + + + P+++S E G +
Sbjct: 502 NMAGRGTDIILGGNADYMARLKLREYWM------------------PQLVSFEEDGFGIA 543
Query: 446 SLALLAKAALLAKYVGKAEG----KSWTYQ----------EAKSFFSESVEMS-QSMNLK 490
+A L A+ G G K+W EA+ +V++ ++
Sbjct: 544 GVAGLEGGRPAAQGFGSPNGQKPRKTWKASSDIFPAELSTEAEKLLKAAVDLGVKTYGGN 603
Query: 491 ELQKLI--DKQSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIG 541
L +L+ DK + PT + Y V K+ E E +EV LGGLHVIG
Sbjct: 604 SLSELVAEDKIATAAEKAPTDDPVIQKLREAYQQVRKEYEAVTKQEQAEVVELGGLHVIG 663
Query: 542 TSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDM 601
T HESRR+DNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDM
Sbjct: 664 TERHESRRVDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAKLMNAFRVEEDM 721
Query: 602 PIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQ 661
PIE + R L G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G +
Sbjct: 722 PIESGMLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--RELKE 779
Query: 662 QIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLL 718
Q+ QY + +DEI+ +++ W L+KL +K+F+ +L+DL A
Sbjct: 780 QVIQYGERTMDEIVDAHINVDLPSEEWDLEKLVNKVKQFVY----LLEDLEA-------- 827
Query: 719 KSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATT 778
K +E+L P+ +F L L I D
Sbjct: 828 KQLEDLS---------------PEAIKIF---------LHEQLRIAYD------------ 851
Query: 779 NLLRKYLGDILIASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSS 835
++E++ D + M++ ER +++ +D WR+HL M L
Sbjct: 852 ------------------LKEAQIDQIQPGLMRQAERYFILQQIDTLWREHLQAMEALRE 893
Query: 836 AVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+V +R +G ++PL EYK +G F+ M++A RR + S+ + P
Sbjct: 894 SVGLRGYGQKDPLLEYKSEGYELFLEMMTAIRRNVIYSMFMFDPQP 939
>gi|307152022|ref|YP_003887406.1| preprotein translocase subunit SecA [Cyanothece sp. PCC 7822]
gi|306982250|gb|ADN14131.1| preprotein translocase, SecA subunit [Cyanothece sp. PCC 7822]
Length = 934
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/932 (41%), Positives = 530/932 (56%), Gaps = 145/932 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLMGGLVLHKGQIAEMKTGEGKTLVSTLPAYLNGLTGKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATSMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF + I+DEVDS+LIDE R PL+ISG + +Y AA++ + LV+
Sbjct: 204 R---PFSYCIIDEVDSILIDEARTPLIISGPIERPTEKYYQAAEIVKQLVKQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K ++ LT++G AE L DL+D+ +PWA ++ NA+KAKE + +DV YIVRN
Sbjct: 261 YEVDEKARNILLTDDGFKKAEELLGVKDLYDQENPWAHYIFNAIKAKELFLKDVNYIVRN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEVVIVDEFTGRVLPGRRWSDGLHQAIEAKERVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN P+ R DLP + GKW EVE + ++GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRPSQRYDLPDAVYKGEGGKWRSVADEVEELHKMGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSELLSRLLREKEIPHNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTR---EALNVEV--------------DDKTSSP 434
RGTDIILGGN +A+ I + L+ + R + L V V D K +
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLMPKIVRPDDDELAVSVPSLGGRRRPQGFASDRKVKTW 560
Query: 435 KVLSEI---KLGSSSLALLAKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLK 490
K ++I +L +++ L +A +A +Y G+ +E + SE+ +
Sbjct: 561 KASADIFPTELSEATVKGLKEAVKIAVEYYGEQSLAELETEEKIAIASENAPTDDPV--- 617
Query: 491 ELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
+QKL Y + + E+ S E EV LGGLHVIGT HESRRI
Sbjct: 618 -IQKL--------------RQVYKKIRGEYEIFTSQEHKEVVELGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ + +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLKIFGGDR--VARLMEALQVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E YY+ IRK + E+DEV+ QRK +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAIYAERRRVLEGLD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIE--ELP 725
+DEI+ V+P P W L+ L +KEF+ LL+ +E ++
Sbjct: 779 MDEIVEAYVNPDLPPEEWDLNTLVSKVKEFV-----------------YLLQDVEPADIE 821
Query: 726 ELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYL 785
++ +I NF ++ RK+ +K D + G R
Sbjct: 822 DMTVFEIKNFLHEEV-----------RKAYDVKEQEV----DHVRPGLMR---------- 856
Query: 786 GDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHR 845
+ ER +++ +D WR+HL M L ++ +R +G +
Sbjct: 857 -----------------------DAERFFILQQIDTLWREHLQGMESLRESIGLRGYGQK 893
Query: 846 NPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
+PL EYK +G F+ M+ RR V SL Q+
Sbjct: 894 DPLIEYKQEGYEMFLEMMIDIRRNVVYSLFQF 925
>gi|255081889|ref|XP_002508163.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226523439|gb|ACO69421.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 1257
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/981 (40%), Positives = 565/981 (57%), Gaps = 110/981 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA+LHDG I EM T VVTVNDYLA+RDA
Sbjct: 172 MRHFDVQLVGGALLHDGCICEMATGEGKTLTATLPAYLNALTGKGVHVVTVNDYLARRDA 231
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVH+ LGL+VG+IQ M EERR Y DITY N+E+GFDYLRDN+A + +LVM
Sbjct: 232 EWMGRVHQSLGLTVGIIQTDMEAEERREAYEADITYVTNTEVGFDYLRDNMANEAHELVM 291
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISG---EASKDVARYPVAAKVAELLVQGLHYTV 154
R + F+FAIVDEVDSVLIDEGRNPLLI+G E +++ +Y VA++VA L +G Y V
Sbjct: 292 R--RGFNFAIVDEVDSVLIDEGRNPLLITGPATEGDEEMNKYTVASQVAAQLKEGSDYVV 349
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKA 214
+ K + +LTE G+ +AE L +D+WD DPW R+++ A+KAK Y RDV YIVR G+
Sbjct: 350 DRKQKTADLTERGMMVAEQLLGVSDIWDTYDPWGRYLLLAVKAKSLYLRDVHYIVREGQV 409
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGRV+ RRW++ IHQAVEAKEG++I+ ++ VA I+YQ LFKLY KLSGMTGT
Sbjct: 410 MIVDEGTGRVQPNRRWNDNIHQAVEAKEGVEIKRENTTVASISYQCLFKLYDKLSGMTGT 469
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE +E +++ V+ VPT+ N+RVD P F TA +W + S GRPVL
Sbjct: 470 ASTEAEELYTTYKLSVVTVPTHRRNMRVDKPHAMFRTAAARWNAVADLIVSCHWEGRPVL 529
Query: 335 VGSTSVENSEYLSDLLKQ-----------QGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
VG+TSVE+SEYLS LL + G+PH +LNARP+ AA+EAE VAQAGR +A+
Sbjct: 530 VGTTSVEHSEYLSRLLAEYRWQSQDGKLVNGVPHKLLNARPQLAAKEAEIVAQAGRAHAV 589
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLG 443
TI+TNMAGRGTDI+LGGNP LA+ +E L L+ + D S P ++ + +
Sbjct: 590 TIATNMAGRGTDIVLGGNPPGLARLFLERALFPKLS---VGTPEADDASEPNPMATVGMS 646
Query: 444 SSSLALLAKAALLAKYVGKAEGKSWTYQEAK-SFFSESVEMSQSM----NLKELQKLIDK 498
+ A + A LA KA+G +A + +E+VE ++ + ++E +
Sbjct: 647 PKTEAAVQAAVGLAHVTAKADGAVPVSPDAVVALVTEAVEYAEQILRGGAVREAAEAAAA 706
Query: 499 QSAMYPLGPTVALTYL-----SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQ 553
+ GP + L +L+DC C E + V+ LGGL VIGT+LH+SRR+DNQ
Sbjct: 707 EREKEIGGPNPVMNALRHAAVCLLEDCTAQCEREATLVRDLGGLQVIGTALHDSRRVDNQ 766
Query: 554 LRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQL 612
LRGRAGRQGDPGST F +S++DE+ + WA + + D+D P+ D + +QL
Sbjct: 767 LRGRAGRQGDPGSTIFCLSMEDELMAVYC--PGWASSSVWDWSGMDDDTPLFSDVVDKQL 824
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
G+Q S E ++ R S E D +++ QR +Y++R+ +L + ++ +Y++ +VD
Sbjct: 825 AGIQASIEDFHATHRTSTYETDRIIDGQRDAIYNVRRKVLEDGQQPLRARLLRYIEWIVD 884
Query: 673 EII-FGNVDPLKHPRYWSLDKLLKEFIAI-AGKILDDLFAGISGDTL------------- 717
+ VD L+ W ++ LL + + AG+ D + SG T+
Sbjct: 885 DACDRAKVDGLRPIDDWDIEGLLDDLRTVFAGR--RDQWLNESGQTMSEFPHFLPGVDAR 942
Query: 718 -----LKSIEELP-----------------ELNSIDINNFYFPDLP------KPPNLFRG 749
LKS +P L +D+ + P P +P
Sbjct: 943 GIRDALKSKGAMPLQTELPGLEAAPEVVAAALRGVDVVDMNPPAKPARVVDTEPEAAEEC 1002
Query: 750 IRRKSSSLKRWLAICS-----DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE--SRY 802
I ++ +++ + I +D + G A +LR YL + IA YL+ RY
Sbjct: 1003 I---AARVEKRMEITKGMKSLEDYGRRGMNAAEGRMLRTYLSESAIALYLDRFARLNQRY 1059
Query: 803 DDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
D ++ VER +++ +D W+ HL+ M L S+VNVR+FG +P+EEY+IDG R F+ M
Sbjct: 1060 DRTDLEAVERVWVLRAIDDRWQRHLVEMQVLRSSVNVRAFGQLDPMEEYRIDGARAFVDM 1119
Query: 863 LSATRRLTVESLVQYWSSPME 883
+ RR TV ++ + S +E
Sbjct: 1120 VRDMRRKTVANVFFFVGSAVE 1140
>gi|434392056|ref|YP_007127003.1| protein translocase subunit secA [Gloeocapsa sp. PCC 7428]
gi|428263897|gb|AFZ29843.1| protein translocase subunit secA [Gloeocapsa sp. PCC 7428]
Length = 931
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/916 (42%), Positives = 535/916 (58%), Gaps = 115/916 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA+LH G IAEMKT +VTVNDYLA+RDA
Sbjct: 77 MRHFDVQLLGGAILHHGQIAEMKTGEGKTLVSTLPAYLNALSGKGVHIVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGLSVGLIQ+GM P ER+ NY CDITY NSE+GFDYLRDN+A++ +++V
Sbjct: 137 EWMGQIHRFLGLSVGLIQQGMGPSERKKNYDCDITYVTNSEVGFDYLRDNMASSIQEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAQIAAALQKEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++V LT+EG A AE L+ DL+D NDPWA ++ NALKAKE + +DV+YIVRN + +I+
Sbjct: 254 AHNVILTDEGFAAAEEMLQVKDLYDPNDPWAHYIFNALKAKELFTKDVKYIVRNDEVIIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNLFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF +++++ V VPTN P R DL + T GKW ++ M LGRPVLVG+
Sbjct: 374 EEAEFERIYKLEVTIVPTNRPTKRQDLSDMVYKTEEGKWRAIAEDCAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL Q+ +PHN+LNARP+ RE+E +AQAGRK A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSALLSQRNVPHNLLNARPENVERESEIIAQAGRKGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAK-KIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
LGGN +A+ K+ E + ++ E +V +K S S K
Sbjct: 494 LGGNADYMARLKLREYFMPRIVQPEDEDVFAIEKASGLPAASSSSGQGFVPGKKVKTWKA 553
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPT-------V 509
+ + + Q+ K+ +V +L EL+ DK + PT +
Sbjct: 554 SPQIFPTQLSRELEQQLKAAVEFAVREYGERSLPELEAE-DKVAVAAEKAPTNDPVIQKL 612
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
Y ++L++ E S E EV +LGGLHVIGT HESRRIDNQLRGRAGRQGDPGSTRF
Sbjct: 613 RDVYNALLREYEKFTSREHDEVVQLGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSTRF 672
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SLQD + + F D L++ +EDMPIE + R L G Q E YY+ IRK
Sbjct: 673 FLSLQDNLLRIFGGDR--VAGLMTAFQVEEDMPIESKMLTRSLEGAQKKVETYYYDIRKQ 730
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
+ E+DEV+ QR+ +Y R+ +L G +
Sbjct: 731 VFEYDEVMNNQRRAIYAERRRVLEGLD--------------------------------- 757
Query: 690 LDKLLKEF-IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKP----P 744
LKE I A K +D++ ++ + PDLP P
Sbjct: 758 ----LKELVIKYAEKTMDEI-----------------------VDYYINPDLPSEEWDLP 790
Query: 745 NLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD 804
NL S +K ++ + +D L N + + ++ +L + + +Y V+E++ D
Sbjct: 791 NLV-------SKVKEFVYLLAD-LEPNQMEDLSISEIKTFLHEQVRIAY--DVKEAQVDQ 840
Query: 805 V---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFIS 861
+ M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F+
Sbjct: 841 IQPGLMRQAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKSEGYELFLD 900
Query: 862 MLSATRRLTVESLVQY 877
M++ RR V SL Q+
Sbjct: 901 MMTNIRRNVVYSLFQF 916
>gi|113478019|ref|YP_724080.1| preprotein translocase subunit SecA [Trichodesmium erythraeum
IMS101]
gi|123351726|sp|Q10VW7.1|SECA_TRIEI RecName: Full=Protein translocase subunit SecA
gi|110169067|gb|ABG53607.1| protein translocase subunit secA [Trichodesmium erythraeum IMS101]
Length = 936
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/928 (41%), Positives = 530/928 (57%), Gaps = 132/928 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIILHQGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM PEER+ NY CDITY NSE+GFDYLRDN+A N E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQGMNPEERKKNYTCDITYATNSEVGFDYLRDNMATNMEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV-QGLHYTVEL 156
R PF+F I+DEVDSVL+DE R PL+ISG+ + +Y AA++A L + HY V+
Sbjct: 204 R---PFNFCIIDEVDSVLVDEARTPLIISGQVERPSEKYIKAAEIAAALSKEKEHYEVDE 260
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V L++EG A AE L DL++ DPWA FV NALKAKE + +DV YIVR+ + +I
Sbjct: 261 KARNVLLSDEGFAEAEQLLAVQDLYNPEDPWAHFVFNALKAKELFIKDVNYIVRDDEVVI 320
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+ F LYPKLSGMTGTAK
Sbjct: 321 VDEFTGRVMPGRRWSDGLHQAIEAKERVDIQPETQTLATITYQNFFLLYPKLSGMTGTAK 380
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++ + V +PTN P R DL + T GKW+ QE M + GRPVLVG
Sbjct: 381 TEEAEFEKIYNLQVTIIPTNKPTGRKDLSDVVYKTEVGKWKSIAQECAEMHKEGRPVLVG 440
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LL + IPH +LNA+P+ RE+E VAQAGR A+TI+TNMAGRGTDI
Sbjct: 441 TTSVEKSELLSRLLGEGKIPHQLLNAKPENVERESEIVAQAGRGGAVTIATNMAGRGTDI 500
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
ILGGN + +AK + + L+ + + E DD LG ++ L K+ +
Sbjct: 501 ILGGNAEYMAKLKLREYLM----PKVVKPEDDD-----------GLGMVRVSGLKKSHVA 545
Query: 457 AKYVGKAEGKSWTY----------QEAKSFFSESVEMS-QSMNLKELQKLI--------- 496
+ + + K+W QE + +V ++ + + L +L+
Sbjct: 546 KGFDPQQKVKTWKVSPQIFPVKLSQETEGMLKLAVNLAVKEWGERALPELVVEDKVAIAA 605
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
+K P+ + Y + ++ E + E ++V GGLHVIGT HESRRIDNQLRG
Sbjct: 606 EKAPTTEPVIEKLREVYNLIRQEYENYIEREHNQVVGCGGLHVIGTERHESRRIDNQLRG 665
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPGSTRF +SL+D + + F D ++ +EDMPIE + R L G Q
Sbjct: 666 RAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGMMQAFGVEEDMPIESGLLTRSLEGAQ 723
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YY+ +RK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D+I+
Sbjct: 724 KKVETYYYDMRKQVFEYDEVMNNQRRAIYAERRRVLEGRD--LKEQVIKYAEQTMDDIVE 781
Query: 677 GNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDIN 733
++P W LDKL +K+F+ +L DL + E+L +L+ DI
Sbjct: 782 AYINPELPSEEWELDKLVEKVKQFVY----LLADL-----------TPEQLFDLSMEDIR 826
Query: 734 NFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASY 793
F + R + +K A N +R L
Sbjct: 827 TFMHEQV-----------RNAYDIK----------------EAQVNQIRGGL-------- 851
Query: 794 LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 852 -------------MRDAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKS 898
Query: 854 DGCRFFISMLSATRRLTVESLVQYWSSP 881
+G F+ M++ RR V SL Q+ P
Sbjct: 899 EGYELFLDMMTDIRRNVVYSLFQFQPQP 926
>gi|428772318|ref|YP_007164106.1| protein translocase subunit secA [Cyanobacterium stanieri PCC 7202]
gi|428686597|gb|AFZ46457.1| protein translocase subunit secA [Cyanobacterium stanieri PCC 7202]
Length = 939
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/929 (41%), Positives = 519/929 (55%), Gaps = 140/929 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHYDVQLLGGIVLHTGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL VGLIQ GM ERR NY DITY NSELGFDYLRDN+A + E++V
Sbjct: 144 EWMGQIHRFLGLEVGLIQSGMTSVERRKNYLADITYATNSELGFDYLRDNMATSIEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ------GLH 151
R P H+ I+DEVDS+L+DE R PL+ISG+ + + +Y AA+VA++L + G H
Sbjct: 204 RSP---HYCIIDEVDSILVDEARTPLIISGQVDRPIEKYQRAAEVAQMLTKQEEEGDGGH 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V LT+EG A AE L DL+D+ +PWA +V NA+KAKE + RDV Y+VRN
Sbjct: 261 YEVDEKARNVLLTDEGFAKAEELLGVTDLYDQENPWAHYVFNAIKAKELFTRDVNYMVRN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQAVEAKE ++IQ ++ +A ITYQ+ F LY KLSGM
Sbjct: 321 DEVVIVDEFTGRVLAGRRWSDGLHQAVEAKERVEIQRETQTLASITYQNFFLLYEKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE EF K++ + V VPTN PN R DL + KW+ +E M GR
Sbjct: 381 TGTAKTEETEFEKVYNLQVTIVPTNRPNSRNDLADVVYKNEIAKWKAVAEECAEMHETGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL ++ IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSELLSALLAEKKIPHNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDIILGGN +A+ I + + + R DD ++K + +
Sbjct: 501 RGTDIILGGNSDYMARLKIREYFMPQIVRPE-----DD---------QLKFSVAGID-TG 545
Query: 452 KAALLAKYVGKAEGKS-WTYQEAKSFFSESVEMSQSMNLKELQKL--------------- 495
K A + G GK T++ F + LKE+ KL
Sbjct: 546 KKAKGQGFNGNGTGKKPKTWKATSDIFPCELSSETETQLKEVVKLAVDSYGFQGLSELDA 605
Query: 496 -------IDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
+K P+ + Y S+ + E E EV GGLHVIGT HESR
Sbjct: 606 EEKIAIAAEKAPIQDPVLIKLREVYNSIRSEYENLTGKEHDEVIEAGGLHVIGTERHESR 665
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
RIDNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE +
Sbjct: 666 RIDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGML 723
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
R L G Q E +Y+ RKS+ E+DEV+ QR+ +Y R+ +L G E Q+ QY +
Sbjct: 724 TRSLEGAQKKVETFYYDARKSVFEYDEVMNNQRRAIYAERRRVLEG--EDLKDQVIQYAE 781
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELP 725
+DEI+ V+P P W+L+ L+ KEFI +L D+ ++++L
Sbjct: 782 KTMDEIVDAYVNPDLPPDEWNLEALVDKAKEFIY----LLQDV-----------TVKDLE 826
Query: 726 ELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYL 785
++ S ++ F ++ K + D+ +N + L+R
Sbjct: 827 DMTSTEMKTFLREEVHK----------------------AYDIKENQIEKLQPGLMR--- 861
Query: 786 GDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHR 845
+ ER +++ +D WR+HL NM+ L AV +R +G +
Sbjct: 862 -----------------------QAERFFILQQIDTLWREHLQNMDGLREAVGLRGYGQK 898
Query: 846 NPLEEYKIDGCRFFISMLSATRRLTVESL 874
+PL EYK +G F+ M+ RR V SL
Sbjct: 899 DPLIEYKQEGYEMFLEMMIDIRRNVVYSL 927
>gi|22299394|ref|NP_682641.1| preprotein translocase subunit SecA [Thermosynechococcus elongatus
BP-1]
gi|81742698|sp|Q8DHU4.1|SECA_THEEB RecName: Full=Protein translocase subunit SecA
gi|22295577|dbj|BAC09403.1| preprotein translocase subunit [Thermosynechococcus elongatus BP-1]
Length = 929
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/913 (41%), Positives = 517/913 (56%), Gaps = 114/913 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG +LHDG IAEMKT +VTVNDYLA+RDA
Sbjct: 77 MRHFDVQLIGGMILHDGQIAEMKTGEGKTLVATLPAYLNALTGKGVHIVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ+ M P+ER+ +Y CDITY NSE+GFDYLRDN+A + ++V
Sbjct: 137 EWMGQVHRFLGLTVGLIQQQMAPQERQKSYACDITYATNSEIGFDYLRDNMATSMVEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA++A LL + HY V+ K
Sbjct: 197 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPTEKYLKAAEIARLLKKDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +T+EG AE L +DL+D DPWA ++ NA+KAKE ++RDV YIVRNG+ +I+
Sbjct: 254 ARNVLMTDEGFIEAEKLLGVSDLYDPQDPWAHYIFNAIKAKELFQRDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEGL+IQ +S +A ITYQ+LF LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVMVGRRWSDGLHQAIEAKEGLEIQNESQTLATITYQNLFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V VPTN P+ R D P + T R KW E + GRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVTVVPTNRPSQRRDFPDVVYKTERAKWLAVASECAEVHATGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL++ IPHN+LNA+P+ REAE +AQAGRK A+TISTNMAGRGTDII
Sbjct: 434 TSVEKSELLSQLLRELEIPHNLLNAKPENVEREAEIIAQAGRKGAVTISTNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + V + P +L +K+ ++ A
Sbjct: 494 LGGNADYMARLKVREYFMPRI--------VMPPSDDPMMLLGLKMDRGGGQGFSQGAQKN 545
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSM----NLKELQK------LIDKQSAMYPLGP 507
+EA+ +V+++ +L ELQ +K P+
Sbjct: 546 WKASPGLFPCEMSKEAEKLLRHAVDVAVKTYGERSLPELQAEDMLAIASEKAPTEDPVIQ 605
Query: 508 TVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGST 567
+ + + ++ EV E EV LGGLHVIGT HESRRIDNQLRGRAGRQGDPGST
Sbjct: 606 ALRDAFNRIREEYEVVTKKEHEEVVALGGLHVIGTERHESRRIDNQLRGRAGRQGDPGST 665
Query: 568 RFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIR 627
RF +SL+D + + F D ++ RI DEDMPIE + R L Q E YY+ IR
Sbjct: 666 RFFLSLEDNLLRIFGGDRIASIMNAMRI--DEDMPIESPLLTRSLENAQRKVETYYYDIR 723
Query: 628 KSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY 687
K + E+DEV+ QR+ +Y R+ +L G E ++ +Y
Sbjct: 724 KQVFEYDEVMNNQRRAIYAERRRVLEG--EDLKDRVLEY--------------------- 760
Query: 688 WSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
A K +DD+ A + PDLP
Sbjct: 761 -------------AEKTMDDIIAA-----------------------YVNPDLPPEEWDL 784
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-- 805
G+ K LA DL + ++ +L + + +Y +E++ + +
Sbjct: 785 EGLVAKVQEFVYLLA----DLRPEHLAHLSVPEMQAFLHEQVRTAYEQ--KEAQIEAIQP 838
Query: 806 -YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M++ ER +++ +D WR+HL M+ L +V +R +G +PL EYK +G F+ M+
Sbjct: 839 GLMRQAERFFILQQIDLLWREHLQQMDALRESVGLRGYGQEDPLVEYKREGYELFLDMMV 898
Query: 865 ATRRLTVESLVQY 877
RR V SL Q+
Sbjct: 899 MIRRNVVYSLFQF 911
>gi|427737761|ref|YP_007057305.1| protein translocase subunit secA [Rivularia sp. PCC 7116]
gi|427372802|gb|AFY56758.1| protein translocase subunit secA [Rivularia sp. PCC 7116]
Length = 928
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/932 (40%), Positives = 523/932 (56%), Gaps = 131/932 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 MRHFDVQLLGGMILHKGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLTVGLIQSSMTPVERKKNYECDITYVTNSEIGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A LV+ HY V+ K
Sbjct: 197 L---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYVKAAQIARALVKEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE LE DL+D DPWA F+ NA+KAKE + DV YI+RNG+ +I+
Sbjct: 254 ARNVLLTDEGFAYAEELLEVTDLFDPEDPWAHFMFNAIKAKELFLPDVNYILRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DESTGRVLPGRRWSDGLHQAIEAKENVDIQPETQTLASITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DLP F T GKW+ +E M GRPVLVG+
Sbjct: 374 EEVEFEKIYKLEVTIIPTNRVRQRQDLPDMVFKTEVGKWKAIAKECAEMHETGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LLK+ GI H +LNARP+ REAE VAQAGR +TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSQLLKEIGIAHELLNARPENVEREAEIVAQAGRGGMVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + L+ + + D+ T SP L A
Sbjct: 494 LGGNAEYMARLKVREFLMPRIVKPE-----DEDTFSP----------HKATLPTNPAGGQ 538
Query: 458 KYVGKAEGKSWTY----------QEAKSFFSESVEMS----QSMNLKELQK------LID 497
+V + K+W +EA++ ++ E + +L EL+ ++
Sbjct: 539 GFVPGKKVKTWKASPKVFPTQISKEAENILKQATEAAVKEFGERSLSELEAEDKIAVAVE 598
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K P+ + Y V ++ E E ++ LGGLHVIGT HESRRIDNQLRGR
Sbjct: 599 KAPTENPVIQKLREAYNRVKEEYEAFTDKEHDKIISLGGLHVIGTERHESRRIDNQLRGR 658
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 659 AGRQGDPGSTRFFLSLEDNLMRIFGGDR--VAGLMNMFRVEEDMPIESGMLTRSLEGAQK 716
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y
Sbjct: 717 KVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKY----------- 763
Query: 678 NVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF 737
A K +DD+ ++ +
Sbjct: 764 -----------------------AEKTMDDI-----------------------VDYYVN 777
Query: 738 PDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVV 797
PDLP + + + +K ++ + SD L + + + ++ +L + + +Y +
Sbjct: 778 PDLPSEE---WELDKLAEKVKEFVYLLSD-LQPSHLEDMSMSEIKAFLHEQVRIAY--DM 831
Query: 798 QESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKID 854
+E+ D + M++ ER +++ +D WR+HL M L +V +R +G ++PL EYK +
Sbjct: 832 KEAEVDQIQPGLMRQAERFFILQRIDTLWREHLQQMEALRESVGLRGYGQKDPLIEYKSE 891
Query: 855 GCRFFISMLSATRRLTVESLVQYWSSPMESQE 886
G F+ M++ RR V SL + P + E
Sbjct: 892 GYELFLDMMTNIRRDVVYSLFMFQPQPQPTVE 923
>gi|443319986|ref|ZP_21049122.1| preprotein translocase, SecA subunit [Gloeocapsa sp. PCC 73106]
gi|442790298|gb|ELR99895.1| preprotein translocase, SecA subunit [Gloeocapsa sp. PCC 73106]
Length = 933
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/927 (40%), Positives = 524/927 (56%), Gaps = 136/927 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 LRHYDVQLIGGIVLHQGQIAEMKTGEGKTLVSTLPAYLNAISGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGL+Q GM ERR NY CDITYT NSELGFDYLRDN+A E++V
Sbjct: 144 EWMGQVHRFLGLSVGLVQAGMGSVERRKNYGCDITYTTNSELGFDYLRDNMATAIEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-----HY 152
R PF++ I+DEVDSVL+DE R PL+ISG+ + +Y AA++A+ LV+ HY
Sbjct: 204 R---PFNYCIIDEVDSVLVDEARTPLIISGQVERPTEKYMQAAEIAKQLVRQTDEEEGHY 260
Query: 153 TVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNG 212
V+ K +V +T+EG A AE + DL+D +PWA ++ NA+KAKE + +DV Y++RNG
Sbjct: 261 EVDEKARNVLMTDEGYAKAEELIGVTDLFDPENPWAHYISNAIKAKELFTKDVNYMIRNG 320
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKL GMT
Sbjct: 321 DIVIVDEFTGRVLTGRRWSDGLHQAIEAKEVVEIQKETQTLATITYQNFFLLYPKLGGMT 380
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTAKTEE EF K++ + V +PTNLP+ R DL + T + KW ++ +M++ GRP
Sbjct: 381 GTAKTEETEFEKVYNLQVTIIPTNLPSKRQDLADVVYKTEQAKWRAVAEDCVNMYQQGRP 440
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TSVE SE LS LL +Q IPH +LNARP+ +E+E VAQAGRK A+TI+TNMAGR
Sbjct: 441 VLVGTTSVEKSEVLSTLLSEQKIPHKLLNARPENVEKESEIVAQAGRKGAVTIATNMAGR 500
Query: 393 GTDIILGGNPKMLAKKIIEDRLLLLLT-----------------REALNVEVDDKTSSPK 435
GTDIILGGN +A+ + + LL + + E K + +
Sbjct: 501 GTDIILGGNADYMARLKVREYLLPQIVKPEDDEFSVSVPALGGRKRPQGFEAGKKIKTWR 560
Query: 436 VLSEI---KLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKEL 492
EI +L S + LL A A ++ YQ +E ++L
Sbjct: 561 ASGEIFPTELSSDTEGLLKNAVKFAV-------DNYGYQSLSELTAE----------EKL 603
Query: 493 QKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDN 552
+K P+ + Y + K+ E S E EV LGGL+VIGT HESRRIDN
Sbjct: 604 AIAAEKAPTDDPVVQKLRDVYNRIRKEYEHFTSREHDEVVSLGGLYVIGTERHESRRIDN 663
Query: 553 QLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQL 612
QLRGRAGRQGDPGSTRF +SLQD + + F D L++ +EDMPIE + R L
Sbjct: 664 QLRGRAGRQGDPGSTRFFLSLQDNLLRIFGGDR--VTGLMNAFRVEEDMPIESKMLTRSL 721
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +D
Sbjct: 722 EGAQKKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLQGFD--IKEQVIQYATKTMD 779
Query: 673 EIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIE--ELPELNSI 730
EI+ V+P P W L+ L+ GK + ++ LLK IE +L ++ +
Sbjct: 780 EIVDAYVNPELPPEEWDLENLV-------GKAQEFVY-------LLKDIEPKDLEDMTVM 825
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
+I F ++ K + K S ++ ++ L+R
Sbjct: 826 EIKTFLHEEIHKAYEI------KESEIE----------------KSQPGLMR-------- 855
Query: 791 ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
+ ER ++ +D WR+HL +M+ L ++ +R +G ++PL E
Sbjct: 856 ------------------QAERFFILNQIDNLWREHLQSMDALRESIGLRGYGQKDPLIE 897
Query: 851 YKIDGCRFFISMLSATRRLTVESLVQY 877
YK +G F+ M+ RR V +L ++
Sbjct: 898 YKQEGYEMFLEMMIDIRRNVVYNLFKF 924
>gi|428769207|ref|YP_007160997.1| protein translocase subunit secA [Cyanobacterium aponinum PCC
10605]
gi|428683486|gb|AFZ52953.1| protein translocase subunit secA [Cyanobacterium aponinum PCC
10605]
Length = 939
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/932 (40%), Positives = 534/932 (57%), Gaps = 146/932 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHYDVQLLGGIVLHTGQIAEMKTGEGKTLVATLPAYLNGLTGEGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGLSVGLIQ GM ER+ NY DITY NSELGFDYLRDN+A + +V
Sbjct: 144 EWMGQIHRFLGLSVGLIQSGMTSVERQKNYSADITYATNSELGFDYLRDNMATDMADVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ------GLH 151
R P ++ I+DEVDS+LIDE R PL+ISG+ + + +Y AAK+A++L + G
Sbjct: 204 RPP---NYCIIDEVDSILIDEARTPLIISGQVERPMEKYMEAAKIAQMLTRQNEEGDGGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V LT+EG A AE L DL+D+++PWA ++ NA+KAKE + RDV YIVRN
Sbjct: 261 YEVDEKARNVLLTDEGFAHAEELLGVTDLYDQDNPWAHYIFNAIKAKELFTRDVNYIVRN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 NEVVIVDEFTGRVLAGRRWSDGLHQAIEAKEGVEIQKETQTLASITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE EF K++ + V +PTN P+ R DLP + KW+ +E + M+ GR
Sbjct: 381 TGTAKTEETEFEKVYNLEVTIIPTNRPSDRNDLPDVVYKNEIAKWKAVAEECKEMYETGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSRLLQEREIPHNILNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAK-KIIEDRLLLLLTREALNVEVDDK--TSSPKVLSEIKLGSSSLA 448
RGTDIILGGN +A+ K+ E + ++T E DD+ + P V
Sbjct: 501 RGTDIILGGNSDYMARLKLREYFMPQIVTPE------DDQLMVNVPGV------------ 542
Query: 449 LLAKAALLAKYVGKAEG---KSWT----------YQEAKSFFSESVEMS------QSMNL 489
+AK A + G +G K+W + ++ E+V+ + QS++
Sbjct: 543 DMAKRAKGQGFSGNGDGKKQKNWKPSSDLFPCQLSADTEALLKEAVKFAVEKYGQQSLSE 602
Query: 490 KELQKLI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLH 545
E ++ I +K P+ + Y ++ ++ + E V GGLHVIGT H
Sbjct: 603 LEAEEKIAIAAEKAPTEDPVIQKLREVYQAIRREYDEVTDKEHDLVVEKGGLHVIGTERH 662
Query: 546 ESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEG 605
ESRRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE
Sbjct: 663 ESRRIDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIES 720
Query: 606 DAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQ 665
+ R L G Q E +Y+ RK++ E+DEV+ QR+ +Y R+ +L G + Q+ Q
Sbjct: 721 GMLTRSLEGAQKKVETFYYDARKNVFEYDEVMNNQRRAIYAERRRVLEGRD--LKGQVLQ 778
Query: 666 YMQAVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIE 722
Y +DEI+ V+P P W+L+ L+ KEFI +L D+ +++
Sbjct: 779 YATQTMDEIVDAYVNPDLPPDEWNLEALVEKAKEFIY----LLQDI-----------TVK 823
Query: 723 ELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLR 782
+L ++ ++ F ++ K + DL +N + T L+R
Sbjct: 824 DLEDMTVAEMKTFLHEEVHK----------------------AYDLKENQIEQIQTGLMR 861
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
+ ER +++ +D WR+HL M+ L +V +R +
Sbjct: 862 --------------------------QAERFFILQQIDTLWREHLQKMDGLRESVGLRGY 895
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
G ++PL EYK +G F+ M+ RR V SL
Sbjct: 896 GQKDPLIEYKQEGYEMFLEMMIDIRRNVVYSL 927
>gi|428778580|ref|YP_007170366.1| Preprotein translocase subunit SecA [Dactylococcopsis salina PCC
8305]
gi|428692859|gb|AFZ49009.1| preprotein translocase, SecA subunit [Dactylococcopsis salina PCC
8305]
Length = 956
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/931 (40%), Positives = 522/931 (56%), Gaps = 129/931 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQI+GG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 85 LRHYDVQILGGVVLHSGEIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDS 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P ER+SNY CDITYT NSELGFDYLRDN+A + E++V
Sbjct: 145 EWMGQVHRFLGLSVGLIQQGMSPRERQSNYNCDITYTTNSELGFDYLRDNMATSIEEVVQ 204
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQG-------- 149
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y A+++A L +
Sbjct: 205 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPTEKYIRASQIARELKRDREGEIKTE 261
Query: 150 -------------LHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALK 196
HY V+ K +V LT+EG A AE L NDL+D DPWA +V NA+K
Sbjct: 262 EAMALEEAEAGEEAHYEVDEKAKTVLLTDEGFAKAEELLGVNDLYDPEDPWAHYVFNAIK 321
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
AKE + +DV YIVRNG+ +I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A I
Sbjct: 322 AKELFTKDVNYIVRNGEVVIVDEFTGRVMPGRRWSDGLHQAIEAKEGVEIQKETQTLASI 381
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
TYQ+ F LYPKLSGMTGTAKTEE EF K++ + V +PTNLP R DL + RGKW
Sbjct: 382 TYQNFFLLYPKLSGMTGTAKTEEAEFEKIYNLQVTIIPTNLPLARRDLSDAVYKNERGKW 441
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+ E + M GRPVLVG+TSVE SE LS LL ++G+P+NVLNARP+ RE+E +AQ
Sbjct: 442 KSVADECQEMHEKGRPVLVGTTSVEKSELLSGLLDERGLPYNVLNARPENVERESEIIAQ 501
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLL--LLLTRE----ALNVEVDDK 430
AGRK AITI+TNMAGRGTDIILGGNP +A+ + + + +++ E A++V K
Sbjct: 502 AGRKGAITIATNMAGRGTDIILGGNPDYMARLKLREYFMPKIVIPEEEDELAVSVPNGKK 561
Query: 431 TSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLK 490
+ P+ + ++ K + + E T + K +V+ +L
Sbjct: 562 RNRPQGFGK----DNNQKKKVKTWRASPQIFPTELSKETEEALKKAVDYAVQQYGLQSLP 617
Query: 491 ELQK------LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSL 544
EL+ +K P+ + Y + K+ E + S+E EV LGGLHVIGT
Sbjct: 618 ELEAEEKVAIAAEKAPTDDPVIQNLRKVYREIYKEYESYTSSEHDEVVNLGGLHVIGTER 677
Query: 545 HESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIE 604
HESRRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D + R+ +EDMPIE
Sbjct: 678 HESRRIDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDRVSGMMNAFRV--EEDMPIE 735
Query: 605 GDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIF 664
+ R L Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + Q+
Sbjct: 736 SGILTRSLENAQRKVETFYYDTRKQIFEYDEVMNNQRRAIYAERRRVLEGKD--LKDQVL 793
Query: 665 QYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEEL 724
+Y A + +DD+
Sbjct: 794 EY----------------------------------ARRTMDDI---------------- 803
Query: 725 PELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKY 784
+N + PDLP + K+ L +DL + T ++ +
Sbjct: 804 -------VNAYVNPDLPPEEWDLESMVAKTKEFVYLL----NDLEPSHLEDMTFGEMKTF 852
Query: 785 LGDILIASY-LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
L + + +Y + + + M++ ER +++ +D WR+HL M+ L +V +R +G
Sbjct: 853 LHEEIHKAYDIKEAEVEKLQPGLMRQAERFFMLQQIDTLWREHLQAMDSLRESVGLRGYG 912
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+PL EYK +G F+ M+ RR V SL
Sbjct: 913 QRDPLVEYKQEGYEMFLEMMIDIRRNVVYSL 943
>gi|428315599|ref|YP_007113481.1| protein translocase subunit secA [Oscillatoria nigro-viridis PCC
7112]
gi|428239279|gb|AFZ05065.1| protein translocase subunit secA [Oscillatoria nigro-viridis PCC
7112]
Length = 938
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/922 (40%), Positives = 516/922 (55%), Gaps = 117/922 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 MRHFDVQILGGIILHKGQIAEMKTGEGKTLVATLPAYLNALNGKGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ+GM ER+ NY CDITY NSE+GFDYLRDN+A E +V
Sbjct: 144 EWMGQVHRFLGLTVGLIQQGMDQVERKKNYNCDITYATNSEVGFDYLRDNMATVMEDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQG--LHYTVE 155
R PF+F ++DEVDSVLIDE R PL+ISG+ + +Y AA+VA L + HY V+
Sbjct: 204 R---PFNFCVIDEVDSVLIDEARTPLIISGQVERPSEKYIRAAEVAAALRKENEEHYEVD 260
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR-NGKA 214
K +V LT+EG A AE L DL+D DPWA ++ NA+KAKE + +D+ YIV + +
Sbjct: 261 EKARNVLLTDEGFAEAERLLGVTDLYDPADPWAHYIFNAIKAKELFIKDINYIVTPDREV 320
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGRV RRWS+G+HQA+EAKE +IQ ++ +A ITYQ+ F LYPKLSGMTGT
Sbjct: 321 VIVDEFTGRVMPGRRWSDGLHQAIEAKERAEIQPETQTLATITYQNFFLLYPKLSGMTGT 380
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
AKTEE EF K++ + V +PTN R DL + GKW QE M +GRPVL
Sbjct: 381 AKTEETEFEKIYNLEVTLIPTNRITSRTDLSDMVYKAEAGKWNAIAQECAEMHDIGRPVL 440
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+TSVE SE LS LL+++ IPHN+LNA+P+ RE+E +AQAGRK A+TI+TNMAGRGT
Sbjct: 441 VGTTSVEKSELLSRLLQERKIPHNLLNAKPENVERESEIIAQAGRKGAVTIATNMAGRGT 500
Query: 395 DIILGGNPKMLAKKIIED----RLLLLLTREALNV-EVDDKTSSPKVLSEIKLGSSSLAL 449
DIILGGN + +A+ + + R++ E +V +V P + +
Sbjct: 501 DIILGGNSEYMARLKLREYFMPRIVQPEDEEGFSVVQVPGIGGRPAAQGFGQTAKKVKSW 560
Query: 450 LAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPT- 508
A A + + K T Q K+ +V +L ELQ DK + PT
Sbjct: 561 KASAQIFPTQISKE-----TEQMLKAAVELAVREYGERSLSELQA-DDKIAVASEKAPTK 614
Query: 509 ------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
+ Y + + + S E EV +LGGLHVIGT HESRRIDNQLRGRAGRQG
Sbjct: 615 DPVIQKLREAYKQIRHEYDAFTSTEHDEVVQLGGLHVIGTERHESRRIDNQLRGRAGRQG 674
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPGSTRF +SL+D + + F + L+ +EDMPIE + R L G Q E Y
Sbjct: 675 DPGSTRFFLSLEDNLLRIFGGER--VAGLMKAFGVEEDMPIESGMLTRSLEGAQKKVETY 732
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
Y+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D+I+ ++P
Sbjct: 733 YYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--SKEQVIKYAEQTMDDIVGAYINPD 790
Query: 683 KHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPD 739
W LDKL+ KEF+ + + D + S+EE+ + N Y
Sbjct: 791 LPSEEWELDKLVSKVKEFVYLLADMTPDQLEDL-------SVEEIKTFLHEQVRNAY--- 840
Query: 740 LPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE 799
D+ + A N +R L
Sbjct: 841 ---------------------------DIKE-----AEVNAIRAEL-------------- 854
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F
Sbjct: 855 -------MRDAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKTEGYELF 907
Query: 860 ISMLSATRRLTVESLVQYWSSP 881
+ M++ RR V SL Q+ P
Sbjct: 908 LDMMTDIRRNVVYSLFQFQPQP 929
>gi|354568978|ref|ZP_08988138.1| Protein translocase subunit secA [Fischerella sp. JSC-11]
gi|353539190|gb|EHC08682.1| Protein translocase subunit secA [Fischerella sp. JSC-11]
Length = 930
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/933 (41%), Positives = 512/933 (54%), Gaps = 142/933 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILHTGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P+ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQASMTPQERKKNYDCDITYVTNSEVGFDYLRDNMATSITDVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYIEAARIAAALQKDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAEAEQLLGVKDLFDPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DL F GKW +E M +LGRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVTVIPTNRVRRREDLSDMVFKNEAGKWRAIAKECAEMHQLGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LLKQ IPH +LNARP+ REAE VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSQLLKQMNIPHELLNARPENVEREAEIVAQAGRKGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ L RE P++ +K ++ + +AA L
Sbjct: 494 LGGNAEYMAR---------LKMREYF---------MPRI---VKPEDEAMFSVHRAAGLP 532
Query: 458 KYVGKAEG-------KSWTY----------QEAKSFFSESVEMS----QSMNLKELQK-- 494
G +G K+W +EA+ ++VEM+ +L EL+
Sbjct: 533 PASGGGQGFAPGKKVKTWKASPQVFPTQLSKEAEQLLKQAVEMAVKAYGERSLPELEAEE 592
Query: 495 ----LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
+K P+ + Y + ++ EV S E EV LGGLHVIGT HESRRI
Sbjct: 593 KVAIAAEKAPTEDPVIQKLREAYNRIKQEYEVFTSREHQEVVELGGLHVIGTERHESRRI 652
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 653 DNQLRGRAGRQGDPGSTRFFLSLEDNLMRIFGGDR--VAKLMEAFRVEEDMPIESGMLTR 710
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E YY+ IRK Q+F+Y
Sbjct: 711 SLEGAQKKVETYYYDIRK---------------------------------QVFEY---- 733
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
DE++ + R L+ G L + + E E
Sbjct: 734 -DEVMNNQRRAIYAERRRVLE----------------------GQDLKEQVIEYAERTMD 770
Query: 731 DINNFYF-PDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-I 788
DI N+Y PDLP + K LA DL + + + ++ ++ + +
Sbjct: 771 DIVNYYINPDLPSEEWELDKLVEKVKEFVYLLA----DLQSSQLVDMSMSEIKAFMHEQV 826
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
IA + Q + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL
Sbjct: 827 RIAYDMKEAQIDQIQPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPL 886
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
EYK +G F+ M++ RR V SL + P
Sbjct: 887 IEYKTEGYELFLDMMTNIRRDVVYSLFMFQPQP 919
>gi|254422692|ref|ZP_05036410.1| preprotein translocase, SecA subunit [Synechococcus sp. PCC 7335]
gi|196190181|gb|EDX85145.1| preprotein translocase, SecA subunit [Synechococcus sp. PCC 7335]
Length = 929
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/927 (40%), Positives = 517/927 (55%), Gaps = 130/927 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLHDG IAEMKT +VTVNDYLA+RDA
Sbjct: 77 MRHYDVQLLGGMVLHDGQIAEMKTGEGKTLVSTLPAYLNAISGKGVHIVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P+ER+ NY CDITY NSE GFDYLRDN+A +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQGMSPKERKKNYACDITYGTNSEFGFDYLRDNMATQMTDVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-ELLVQGLHYTVEL 156
R PF+F ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA +L + Y V+
Sbjct: 197 R---PFNFCVIDEVDSILIDEARTPLIISGQVERPGEKYTKAAEVAAQLEGDEVDYEVDE 253
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LT+EG AE L DL+D DPWA ++ NA+KAKE + +DV YIVRNG+ +I
Sbjct: 254 KARNVLLTDEGFEKAESLLNVTDLFDPKDPWAHYIFNAIKAKELFTKDVNYIVRNGEIVI 313
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGMTGTAK
Sbjct: 314 VDEFTGRVMAGRRWSDGLHQAIEAKEHVEIQPETQTLASITYQNFFLLYPKLSGMTGTAK 373
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++++ V +PTN P+ R DLP + T KW QE M GRPVLVG
Sbjct: 374 TEEAEFEKIYKLEVTIIPTNRPSQRRDLPDVVYKTENAKWNAIAQECAEMHETGRPVLVG 433
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LL +PHN+LNA+P+ RE+E VAQAGR ++TI+TNMAGRGTDI
Sbjct: 434 TTSVEKSEVLSALLSDLKVPHNLLNAKPENVERESEIVAQAGRSGSVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
ILGGN +A+ + + + L + E DDK G + ++ +
Sbjct: 494 ILGGNADYMARLKVREYFMPRLVKH----EDDDK-----------FGVAQVSAAKNSRQK 538
Query: 457 AKYVGKAEGKSWTYQ----------EAKSFFSESVEMS-QSMNLKELQKLI--------- 496
A + K + K+W E K+ E+V+ + ++ + L +L
Sbjct: 539 AGFADKKKVKTWKVAPQIFPTDLSPEIKNNLKEAVDFAVKTYGAQSLSELAAEDKIAVAA 598
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
+K + P+ + + VL+ E S EV +LGGLHVIGT HESRR+DNQLRG
Sbjct: 599 EKAPSDEPVIQKLRDVHNQVLEAYEAITSAAHDEVIQLGGLHVIGTERHESRRVDNQLRG 658
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPGST+F +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 659 RAGRQGDPGSTKFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQ 716
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YY+ IRK + E+DEV+ QR+ +Y R +L G
Sbjct: 717 KKVETYYYDIRKQVFEYDEVMNNQRRAIYAERHRVLEG---------------------- 754
Query: 677 GNVDPLKHPRYWSLDKLLKEFI-AIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNF 735
+ LKE + A + +DD+ + +
Sbjct: 755 ---------------QALKELVLGYAVQTMDDI-----------------------VEAY 776
Query: 736 YFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIASYL 794
P+LP + S ++ ++ + SD LT + + ++ +L + + IA L
Sbjct: 777 VNPELPSEEWDLASV---VSKVQEFVYLLSD-LTPDQLENLSMGEMKTFLAEQVRIAYDL 832
Query: 795 NVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKID 854
Q M+E ER +++ +D WR+HL M+ L V +R +G ++PL EYK +
Sbjct: 833 KEAQVDMIKPGLMREAERFFILQQIDTLWREHLQQMDALRETVGLRGYGQKDPLIEYKSE 892
Query: 855 GCRFFISMLSATRRLTVESLVQYWSSP 881
G F+ M++ RR V +L Q+ P
Sbjct: 893 GYEVFLEMMTGIRRNVVYTLFQFQPQP 919
>gi|428214707|ref|YP_007087851.1| protein translocase subunit secA [Oscillatoria acuminata PCC 6304]
gi|428003088|gb|AFY83931.1| protein translocase subunit secA [Oscillatoria acuminata PCC 6304]
Length = 937
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/909 (41%), Positives = 519/909 (57%), Gaps = 107/909 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH+G IAEMKT VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGTILHEGQIAEMKTGEGKTLVSTLPAYLNALNGKGVHAVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P ER+ NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQGMSPTERKKNYACDITYCTNSELGFDYLRDNMATSMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDSVL+DE R PL+ISG+ + +Y A ++A L HY V+ K
Sbjct: 204 R---PFNYCIIDEVDSVLVDEARTPLIISGQIERPTEKYTRATEIAMALNAEEHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+EG A AE L DL+D DPWA ++ NA+KAKE + +DV YIVR + +I+
Sbjct: 261 ARNILLTDEGFAQAEELLGVTDLYDPADPWAHYIFNAIKAKELFIKDVNYIVRQDEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 321 DEFTGRVMPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNFFLLYPKLAGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF +++ + V +PTN R D+ + + GKW+ QE M + GRPVLVG+
Sbjct: 381 EEAEFERIYNLQVTVIPTNRSLQRRDMSDVVYKSEEGKWKSIAQECAEMHQEGRPVLVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL Q +PHN+LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 441 TSVEKSEVLSRLLNQLEVPHNLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLS-EIKLGSSSLALLAKAALL 456
LGGN + +A+ + + LL + R E + ++PKV + + A ++ +
Sbjct: 501 LGGNAEYMARLKVREYLLPRIVRP----EEEGDINAPKVAGLDTRNKPEGFAATSEKKVK 556
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMS-QSMNLKELQKLI--DKQSAMYPLGPT----- 508
V + +E + E+VE + Q ++L +L DK + PT
Sbjct: 557 TWKVSPQIFPTQLSRETEQQLKEAVEFAVQQYGERKLAELEAEDKVAVASEKAPTEDPAI 616
Query: 509 --VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
+ Y + ++ E S+E EV +LGGLHVIGT HESRRIDNQLRGRAGRQGDPGS
Sbjct: 617 QKLRDIYNRIREEYETFTSSEHQEVIQLGGLHVIGTERHESRRIDNQLRGRAGRQGDPGS 676
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
T+F +SLQD + + F ++ + R+ +EDMPIE + R L G Q E YY+ I
Sbjct: 677 TKFFLSLQDNLLRIFGGQRVESMMNMFRV--EEDMPIESKMLTRSLEGAQKKVETYYYDI 734
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y
Sbjct: 735 RKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVIKY-------------------- 772
Query: 687 YWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
A + +DD+ + + PDLP
Sbjct: 773 --------------AEQTMDDI-----------------------VEAYVNPDLPSEEWQ 795
Query: 747 FRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIASYLNVVQESRYDDV 805
+ K LA DL + + + ++ +L + I IA L Q R
Sbjct: 796 LDQMVDKVKEFVYLLA----DLEPSQLEDLSIDEIKTFLQEQIRIAYDLKEAQVDRIQPG 851
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++ ER +++ +D WR+HL M+ L +V +RS+G ++PL EYK +G F+ M++A
Sbjct: 852 LMRQAERFFILQQIDTLWREHLQQMDALRESVGLRSYGQKDPLLEYKSEGYELFLDMMTA 911
Query: 866 TRRLTVESL 874
RR V SL
Sbjct: 912 IRRNVVYSL 920
>gi|443313127|ref|ZP_21042740.1| preprotein translocase, SecA subunit [Synechocystis sp. PCC 7509]
gi|442776935|gb|ELR87215.1| preprotein translocase, SecA subunit [Synechocystis sp. PCC 7509]
Length = 933
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/924 (40%), Positives = 523/924 (56%), Gaps = 129/924 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGTILHKGQIAEMKTGEGKTLVSTLPAYLNGLTGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQGMGPSERKKNYDCDITYVTNSEVGFDYLRDNMATSIVDVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL--HYTVE 155
R P H+ ++DEVDS+L+DE R PL+ISG+ + +Y AA++A +L G HY V+
Sbjct: 197 R---PLHYCVIDEVDSILVDEARTPLIISGQVERPTEKYLQAAQIAAVLKTGEDDHYEVD 253
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V LT+EG A AE L DL++ DPWA ++ NALKAKE + DV YIVRN + +
Sbjct: 254 EKARNVLLTDEGFAEAEKLLGVTDLFNPEDPWAHYIFNALKAKELFITDVNYIVRNDEVV 313
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+LF LY KL+GMTGTA
Sbjct: 314 IVDEFTGRVLPGRRWSDGLHQAIEAKEGVEIQPETQTLATITYQNLFLLYDKLAGMTGTA 373
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KTEE EF K++++ V VPTN P R DL F GKW QE M +GRPVLV
Sbjct: 374 KTEEAEFEKIYKLEVTIVPTNRPRSRQDLSDVVFKAEEGKWNAIAQECAQMHEMGRPVLV 433
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LL Q IP+N+LNARP+ RE+E +AQAGR+ A+TI+TNMAGRGTD
Sbjct: 434 GTTSVEKSEYLSTLLNQLEIPYNLLNARPENVERESEIIAQAGRRGALTIATNMAGRGTD 493
Query: 396 IILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAAL 455
IILGGN + +A+ + + + + V D+ S + + SS+
Sbjct: 494 IILGGNSEYMARLKLREYFMPRIV-----VPEDEDIFGMATASGLPIPSSTSG------- 541
Query: 456 LAKYVGKAEGKSWTY----------QEAKSFFSESVEMS------QSMNLKELQKLI--- 496
++ + KSW QE + ++VE + +SM E + L+
Sbjct: 542 -QGFIPGKKIKSWKASPQIFPTQLSQETEQLLKQAVEFAVQHYGERSMPELEAEDLVAVA 600
Query: 497 -DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
+K P+ + Y V ++ E E EV +LGGLHVIGT HESRRIDNQLR
Sbjct: 601 AEKAPTEDPVIQRLRAAYNQVKQEYEQFTDTEHKEVVQLGGLHVIGTERHESRRIDNQLR 660
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GRAGRQGDPGST+F +SLQD + + F D + + R+ +EDMPIE + R L G
Sbjct: 661 GRAGRQGDPGSTKFFLSLQDSLLRIFGGDRVGKLMDMFRV--EEDMPIESGMLTRSLEGA 718
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y
Sbjct: 719 QKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKY--------- 767
Query: 676 FGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNF 735
A K +DD+ ++ +
Sbjct: 768 -------------------------AEKTMDDV-----------------------VDYY 779
Query: 736 YFPDLPKPP-NLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIASY 793
PDLP +L + S +K ++ + +D L N + ++ ++ + + IA
Sbjct: 780 INPDLPSEDWDLVTLV----SKVKEFVYLLAD-LEPNQLEDLSITEIKTFMHEQVRIAYD 834
Query: 794 LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
+ + R M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 835 IKEGEVDRIQPGLMRQAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLVEYKS 894
Query: 854 DGCRFFISMLSATRRLTVESLVQY 877
+G F+ M++ R V SL Q+
Sbjct: 895 EGYELFLDMMTNIYRNVVYSLFQF 918
>gi|428774820|ref|YP_007166607.1| protein translocase subunit secA [Halothece sp. PCC 7418]
gi|428689099|gb|AFZ42393.1| protein translocase subunit secA [Halothece sp. PCC 7418]
Length = 955
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 379/929 (40%), Positives = 513/929 (55%), Gaps = 126/929 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQI+GG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 85 LRHYDVQILGGIVLHSGEIAEMKTGEGKTLVATLPCYLNALSGKGVHVVTVNDYLARRDS 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P ER+ NY CDITYT NSELGFDYLRDN+A + E++V
Sbjct: 145 EWMGQVHRFLGLSVGLIQQGMSPRERQENYACDITYTTNSELGFDYLRDNMATSLEEVVQ 204
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y A++VA+ L
Sbjct: 205 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPTEKYIRASEVAKELKRDREGELKTE 261
Query: 148 -----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALK 196
Q HY V+ K SV LT+EG A AE L NDL+D DPWA ++ NA+K
Sbjct: 262 EAVALEEAEAGQEAHYEVDEKAKSVILTDEGFAKAEELLGVNDLYDPEDPWAHYIFNAIK 321
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
AKE + +DV YIVRNG+ +I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A I
Sbjct: 322 AKELFIKDVNYIVRNGEVVIVDEFTGRVMPGRRWSDGLHQAIEAKEEVEIQKETQTLASI 381
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
TYQ+ F LYPKLSGMTGTAKTEE EF K++ + V +PTNLP R DL + RGKW
Sbjct: 382 TYQNFFLLYPKLSGMTGTAKTEEAEFEKIYNLQVTIIPTNLPLARRDLADSVYKNERGKW 441
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+ E + GRPVLVG+TSVE SE LS LL ++ +P+NVLNARP+ RE+E +AQ
Sbjct: 442 KSVADECQEKHEQGRPVLVGTTSVEKSELLSKLLDERELPYNVLNARPENVERESEIIAQ 501
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDD-KTSSP- 434
AGRK AITI+TNMAGRGTDIILGGNP +A+ + + + + + E DD S P
Sbjct: 502 AGRKGAITIATNMAGRGTDIILGGNPDYMARLKLRE---YFMPKVVIPEEDDDLAVSVPN 558
Query: 435 --KVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKEL 492
K G + K + + E T Q+ K +V+ +L EL
Sbjct: 559 GKKRSGGQGFGGQNKKKKVKTWRASPQIFPTELSKATEQKLKEAVDYAVQEYGLQSLPEL 618
Query: 493 QK------LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHE 546
+K P+ + Y + ++ E + S E EV LGGLHVIGT HE
Sbjct: 619 DAEEKVAIAAEKAPTDDPVIQNLRNVYRDIYQEYEAYTSQEHDEVVELGGLHVIGTERHE 678
Query: 547 SRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGD 606
SRRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D + R+ +EDMPIE
Sbjct: 679 SRRIDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDRVSGMMNAFRV--EEDMPIESG 736
Query: 607 AIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQY 666
+ R L Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + Q+ +Y
Sbjct: 737 MLTRSLENAQRKVETFYYDTRKQIFEYDEVMNNQRRAIYAERRRVLEGKD--LKDQVLEY 794
Query: 667 MQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPE 726
A + +DD+
Sbjct: 795 ----------------------------------ARRTMDDI------------------ 802
Query: 727 LNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLG 786
+N + P+LP + K+ L +D+ + T +R +L
Sbjct: 803 -----VNAYVNPELPPEEWDLESMVAKAKEFVYLL----EDVEPSQMEDMTFGEMRAFLH 853
Query: 787 DILIASY-LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHR 845
+ + +Y + + + M++ ER +++ +D WR+HL M+ L +V +R +G R
Sbjct: 854 EEIHKAYDIKEAEVEKLQPGLMRQAERFFMLQQIDTLWREHLQAMDSLRESVGLRGYGQR 913
Query: 846 NPLEEYKIDGCRFFISMLSATRRLTVESL 874
+PL EYK +G F+ M+ RR V SL
Sbjct: 914 DPLVEYKQEGYEMFLEMMIDIRRNVVYSL 942
>gi|428306078|ref|YP_007142903.1| protein translocase subunit secA [Crinalium epipsammum PCC 9333]
gi|428247613|gb|AFZ13393.1| protein translocase subunit secA [Crinalium epipsammum PCC 9333]
Length = 931
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 369/915 (40%), Positives = 523/915 (57%), Gaps = 120/915 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIVLHKGQIAEMKTGEGKTLVSTLPAYLNAISGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ M P ER+ NY CD+TY NSELGFDYLRDN+A + +V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSSMGPNERKKNYGCDVTYATNSELGFDYLRDNMATSMVDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDSVLIDE R PL+ISG+ + +Y A+++A+ L + HY V+ K
Sbjct: 204 R---PFNFCIIDEVDSVLIDEARTPLIISGQVERPTEKYIQASEIAQQLKKEEHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +T+EG A AE L DL+D NDPWA ++ NA+KAKE + DV YIVRN + +I+
Sbjct: 261 ARNVLMTDEGFAEAERLLGVTDLYDPNDPWAHYLFNAIKAKELFLLDVNYIVRNDEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 321 DEFTGRVLPGRRWSDGLHQAIEAKERVEIQNETQTLATITYQNFFLLYPKLSGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++++ V +PTN + RVD+ + + KW QE M ++GRPVLVG+
Sbjct: 381 EEAELEKIYKLQVTIIPTNRNSQRVDVADVVYKSEIAKWRAVAQECAEMNQMGRPVLVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL Q +PHN+LNA+P+ RE+E +AQAGRK A+TISTNMAGRGTDII
Sbjct: 441 TSVEKSEVLSQLLNQLEVPHNLLNAKPENVERESEIIAQAGRKNAVTISTNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ I + + E +D ++ +V G+ A+
Sbjct: 501 LGGNADYMARLKIRE----FFMPRVVQPEEEDAFATTRVP-----GAGGGRAPAQGFAPG 551
Query: 458 KYVGKAEGKSWTY-----QEAKSFFSESVEMS------QSMNLKELQKLIDKQSAMYPLG 506
K V + + +E + ++V+ + +S++ E + +I + P+
Sbjct: 552 KKVKNWKASQEIFPTKLSKETEQLLKQAVDSAVQKYGERSLSELEAEDVIAVAAENAPVD 611
Query: 507 ----PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
+ Y + KD E E EV +GGLHVIGT HESRRIDNQLRGRAGRQG
Sbjct: 612 DLAIQQMRAAYKQLRKDYEQFTKREHDEVVEIGGLHVIGTERHESRRIDNQLRGRAGRQG 671
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPGS RF +SL D + + F D L++ +EDMPIE + R L G Q E Y
Sbjct: 672 DPGSARFFLSLDDSLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQKKVETY 729
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
Y+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ Y + +++I+ V+P
Sbjct: 730 YYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVIAYAEKTMEDIVDAYVNPE 787
Query: 683 KHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPK 742
P W ++ ++ GK+ + ++ LL +E
Sbjct: 788 LPPEEWDIN-------SLVGKVKEFVY-------LLADLE-------------------- 813
Query: 743 PPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRY 802
P +L DD+T ++ ++ + + +Y ++E++
Sbjct: 814 PEHL-------------------DDMT--------VEQIKTFMSEEVRKAY--DLKEAQV 844
Query: 803 DDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
D + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F
Sbjct: 845 DQIQPGLMRQAERFFILQQIDTLWREHLQGMDSLRESVGLRGYGQKDPLIEYKQEGYEMF 904
Query: 860 ISMLSATRRLTVESL 874
+ M++ RR V SL
Sbjct: 905 LDMMTDIRRNVVYSL 919
>gi|425450055|ref|ZP_18829887.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 7941]
gi|389769286|emb|CCI05835.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 7941]
Length = 938
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 378/927 (40%), Positives = 520/927 (56%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQERKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
+DEI+ V+P W L+KL+ + F + D K IE E++
Sbjct: 779 MDEIVMAYVNPELPAEEWDLEKLISK---------SQEFVYLLADITAKDIE---EMSVN 826
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
DI F ++ RK+ +K
Sbjct: 827 DIKMFLHEEV-----------RKAYEIK-------------------------------- 843
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
E + D++ +M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 844 --------ERQVDNIRAGFMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|145348163|ref|XP_001418525.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578754|gb|ABO96818.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 918
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 381/938 (40%), Positives = 530/938 (56%), Gaps = 166/938 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+ HFDVQ+IGGA+LH+G +AEM T VVTVNDYLA RDA
Sbjct: 81 LTHFDVQLIGGALLHEGWVAEMSTGEGKTLVATLPAYLNALDGKGVHVVTVNDYLAARDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M R++RFLGL+VG+IQ M EER+ Y CDITY N+E+GFDYLRDN+A ++E+LV+
Sbjct: 141 TEMGRIYRFLGLTVGVIQSDMTSEERQRAYACDITYVTNTEIGFDYLRDNMANDAEELVV 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEAS-KDVARYPVAAKVAELLVQGLHYTVEL 156
+PF+FAIVDEVDSVLIDEGRNPLLI+G D +Y AAKVAE L+ G + V L
Sbjct: 201 -LTRPFNFAIVDEVDSVLIDEGRNPLLITGTGDVNDDDQYVTAAKVAESLIPGRDFKVVL 259
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K + ELT+EG+ AE L NDLWD +PW ++++ A+KA+ + +D+ YIVR+GK +I
Sbjct: 260 KEKTAELTDEGMLHAEQILGVNDLWDAKNPWGKYILLAVKARALFIKDIDYIVRDGKVII 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ TGRV+ RRW++ +HQAVEAKEG++I ++ ++A I+YQ LFKLY KLSGMTGTA
Sbjct: 320 VDPSTGRVQMNRRWNDNLHQAVEAKEGVEINGENSIIASISYQCLFKLYKKLSGMTGTAS 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF + + V VPTN PN+R+D F + +W +E GRPVLVG
Sbjct: 380 TESEEFFTTYNLGVARVPTNKPNLRIDSQTSLFLNSIPRWYAVVDLIERCHAEGRPVLVG 439
Query: 337 STSVENSEYLSDLLKQQ-----------GIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
+TSVENSE LSDLL + G+PH +LNARP+YAAREAE +AQAGRKYA+TI
Sbjct: 440 TTSVENSEILSDLLSRHRWVTNDGRKIAGVPHELLNARPQYAAREAEIIAQAGRKYAVTI 499
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSS 445
+TNMAGRGTDI+LGG+P LAK+ ++++L +
Sbjct: 500 ATNMAGRGTDILLGGSPVGLAKRALKEKL---------------------------WPAF 532
Query: 446 SLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPL 505
L + AALL YV + QEA+ + ++Q+ + + L ++
Sbjct: 533 DLGDIGDAALLM-YVDLS-------QEAQ------ITLNQAEHDRVLMHFVN-------- 570
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
+ VL+DC+ CS+E EV+ +GGL VIGTS+H+SRR+DNQLRGRA RQGDPG
Sbjct: 571 -----VAAYHVLRDCQKQCSDEREEVREVGGLQVIGTSIHDSRRVDNQLRGRAARQGDPG 625
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYF 624
ST F VS +DE+ Q + W D + DE PI D + QL +Q E Y
Sbjct: 626 STVFCVSAEDELLQTYM--PGWGNDKLWMFAGVDEYSPIVSDIVDGQLRMVQKQIEDYLS 683
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI-----IFGNV 679
R+S E D VL+ QR+ VY LR+ IL + + +++F+YM VVD+ + GNV
Sbjct: 684 SHRQSTFESDRVLDGQREAVYKLRRQILLSSQSALRERLFKYMARVVDDACERAGVSGNV 743
Query: 680 DPLKHPRYWSLDKLLKEFIAI-AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFP 738
HP+ W+ ++LL E + G+ D A G LP + Y P
Sbjct: 744 ----HPKKWNYEQLLSELRCVFIGRT--DFIALTRG---------LPTGD----RPHYLP 784
Query: 739 DLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ 798
+ N R +R YL + + YL+
Sbjct: 785 GV----NAARRLR-------------------------------SYLTESAVQLYLD--- 806
Query: 799 ESRYDDVYMKEVERAVL--------VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
R+ + K+ +RA L ++ +D W+ HL+ M L S+V VRSFGH +P +E
Sbjct: 807 --RFARLAAKDYDRAELESVERLWALRAIDELWQRHLVQMEVLRSSVQVRSFGHLDPKDE 864
Query: 851 YKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
++IDG R F+S++ + R V+++ + + +E F
Sbjct: 865 FRIDGARAFVSLVESIREAMVKNIFFFIGASVEPTTNF 902
>gi|425445593|ref|ZP_18825621.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9443]
gi|389734359|emb|CCI01949.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9443]
Length = 938
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 377/924 (40%), Positives = 517/924 (55%), Gaps = 135/924 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGAIDQPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE LE DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKKAEELLEVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQERKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
+DEI+ ++P W L+KL+ + F + D K IE E++
Sbjct: 779 MDEIVMAYINPELPAEEWDLEKLISK---------SQEFVYLLADITAKDIE---EMSVN 826
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
DI F ++ RK+ +K R N+ + D
Sbjct: 827 DIKMFLHEEV-----------RKAYEIKE---------------RQVDNIRAGLMRD--- 857
Query: 791 ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
ER +++ +D WR+HL M L ++ +R +G ++PL E
Sbjct: 858 -------------------AERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDPLIE 898
Query: 851 YKIDGCRFFISMLSATRRLTVESL 874
YK +G F+ M+ RR V SL
Sbjct: 899 YKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|86609886|ref|YP_478648.1| preprotein translocase subunit SecA [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123737958|sp|Q2JJ09.1|SECA_SYNJB RecName: Full=Protein translocase subunit SecA
gi|86558428|gb|ABD03385.1| preprotein translocase, SecA subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 957
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 349/747 (46%), Positives = 466/747 (62%), Gaps = 70/747 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G IAEMKT +VTVN YLA+RD+
Sbjct: 80 LRHYDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNGYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGL+Q GM PEE+R +Y CDITY NSELGFDYLRDN+A + ++++
Sbjct: 140 EWMGQVHRFLGLTVGLVQEGMSPEEKRRSYNCDITYCTNSELGFDYLRDNMATDIKEVMQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LIDE R PL+ISG+ ++ +Y AA+VA L++ HY V+ K
Sbjct: 200 R---PFNYCIIDEVDSILIDEARTPLIISGQVARPSEKYLRAAQVARELIRDEHYEVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L +DL+D DPWA FV NA+KAKE + +DV YIVRN + +I+
Sbjct: 257 ARNVILTDEGFEAAERLLGVSDLFDPKDPWAHFVFNAVKAKELFIKDVHYIVRNQEVVIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQAVEAKEG+ IQ++S +A ITYQ+LF LYPKLSGMTGTA+T
Sbjct: 317 DEFTGRVLPGRRWSDGLHQAVEAKEGVPIQSESQTLATITYQNLFLLYPKLSGMTGTART 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K + + V +PTN P R D P + T RGKW+ +E+ M GRPVLVG+
Sbjct: 377 EEAEFGKTYNLEVTVIPTNRPIRRKDAPDLVYKTERGKWQAVAEEIAHMHAQGRPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS +LK+ GIPHN+LNA+P+ REAE +AQAGRK A+TI+TNMAGRGTDII
Sbjct: 437 TSVEKSERLSAMLKEMGIPHNLLNAKPENVEREAEIIAQAGRKGAVTIATNMAGRGTDII 496
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + +RL+ L + ++ D+ LGS +
Sbjct: 497 LGGNAEYMARLKLRERLMPKLAQ----LDADN-----------PLGSVQMVGRGGGQGFG 541
Query: 458 KYVGKAEGKSWTYQEAKSFFSE-SVEMSQSMN-----------LKELQKLI--------- 496
K + KSWT + E S +Q+++ L L +L+
Sbjct: 542 GTAPKPK-KSWTVVSPNFYPCELSARTNQALDEVVAAAVTKYGLNRLPELVVEDLIAVAS 600
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
+K PL + Y S+ + E E EV RLGGLHVIGT HESRRIDNQLRG
Sbjct: 601 EKAPVQDPLILQLREVYNSIKAEYEKITEAEHEEVVRLGGLHVIGTERHESRRIDNQLRG 660
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPGS+RF +SL+D + + F + L+ +EDMPIE + L Q
Sbjct: 661 RAGRQGDPGSSRFFLSLEDNLLKIFGGER--VAKLMDMFRVEEDMPIEHPLLSSSLENAQ 718
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YYF +RK + E+DEV+ QR+ +Y R+ IL G E+ +I Y++ V EI+
Sbjct: 719 RKVEVYYFDMRKQVFEYDEVMNNQRRAIYSERRRILEG--ENLKTKILDYVRKTVGEIVR 776
Query: 677 GNVDPLKHPRYWSLDKL---LKEFIAI 700
+V+P P W +DKL ++EF+ +
Sbjct: 777 AHVNPELPPEEWEIDKLTAKMQEFVPL 803
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M++ ER L++ +D WR+HL M L AV +R +G ++PL EYK +G F+ M+
Sbjct: 848 MRKAERFFLLQQVDTLWREHLQQMEALREAVGLRGYGQKDPLIEYKNEGYELFLEMMDNI 907
Query: 867 RRLTVESL 874
RR TV +L
Sbjct: 908 RRNTVYNL 915
>gi|33862195|ref|NP_893756.1| preprotein translocase subunit SecA [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|81712568|sp|Q7UZM1.1|SECA_PROMP RecName: Full=Protein translocase subunit SecA
gi|33634413|emb|CAE20098.1| Preprotein translocase SecA subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 943
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 388/932 (41%), Positives = 517/932 (55%), Gaps = 137/932 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMSPAERKKNYACDITYATNSELGFDYLRDNMATEIEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGL 150
R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA K EL G+
Sbjct: 204 R---KFNYCVIDEVDSILIDEARTPLIISGQIERPQEKYQKAAELSLSLIKAKELSKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E AL+ NDL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDQGFAKCEEALKVNDLYDPKDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++ +A+I++E TGRV RRWS+G HQA+EAKEGLKIQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIIKKDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLKIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ VPTN R D Q F T GKW+ E +
Sbjct: 381 GLAGMTGTAKTEEVEFEKTYKLESTVVPTNQIRKRQDWADQVFKTELGKWKAVANETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRNGRPVLVGTTSVEKSELLSSLLFEQQIPHNLLNAKPENVEREAEIVAQAGRSGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ +++ L+ LL V+ D++ P + + + S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLKETLMPLL------VKPDNEHKPP--IPQQRNSKSG 552
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK-----------L 495
A +A KS E ++ S+ EL K L
Sbjct: 553 GGFSANVDSIA----NKNTKSGVDSLFPCQLGEDIKRKLSLLSNELVKNWGDRSLTILEL 608
Query: 496 IDKQSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
DK + PT + + V + E +E V+ GGLHVIGT HESR
Sbjct: 609 DDKIATAAEKAPTEDKLIQSLRESLSEVKNEYEKVLIHEEENVRNAGGLHVIGTERHESR 668
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
R+DNQLRGRAGRQGD GSTRF +SL+D + + F D +L++ DEDMPIE +
Sbjct: 669 RVDNQLRGRAGRQGDLGSTRFFLSLEDNLLRIFGGDR--VANLMNAFRVDEDMPIESGML 726
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
R L Q E YY+ IRK + E+DEV+ QRK VY+ R +L G + +Q+ Y +
Sbjct: 727 TRSLESAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYNERLRVLKGND--LKKQVIGYGE 784
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELP 725
++EI+ ++P P W +D+L+ KEFI +L+DL S D + SIEEL
Sbjct: 785 RTMEEIVEAYINPDLPPEEWDIDQLISKVKEFIY----LLNDL---KSEDVSVLSIEEL- 836
Query: 726 ELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYL 785
+ L+ L I D
Sbjct: 837 ----------------------------KNYLQEQLRIAYD------------------- 849
Query: 786 GDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHR 845
L Q ++ M+E ER +++ +D WR+HL +M+ L +V +R +G +
Sbjct: 850 --------LKEAQIEKFRPGLMREAERFFILQQIDNLWREHLQSMDSLRESVGLRGYGQK 901
Query: 846 NPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
+PL EYK +G F+ M++ RR + S+ +
Sbjct: 902 DPLIEYKNEGYDMFLEMMTNMRRNVIYSMFMF 933
>gi|218437045|ref|YP_002375374.1| preprotein translocase subunit SecA [Cyanothece sp. PCC 7424]
gi|226732185|sp|B7K818.1|SECA_CYAP7 RecName: Full=Protein translocase subunit SecA
gi|218169773|gb|ACK68506.1| preprotein translocase, SecA subunit [Cyanothece sp. PCC 7424]
Length = 935
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 347/754 (46%), Positives = 464/754 (61%), Gaps = 83/754 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLMGGIVLHKGQIAEMKTGEGKTLVSTLPAYLNGLTGKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PE+R+ NY CDITYT NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQSGMSPEDRKKNYACDITYTTNSELGFDYLRDNMATSMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF+F ++DEVDS+LIDE R PL+ISG + +Y A+++A+ LV+
Sbjct: 204 R---PFNFCVIDEVDSILIDEARTPLIISGPIDRPTEKYIQASQIAKQLVKQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K ++ LT+EG AE L DL+D+++PWA ++ NA+KAKE + +DV YIVR
Sbjct: 261 YEVDEKARNILLTDEGYKKAEQLLGVKDLFDQDNPWAHYIFNAIKAKELFTKDVNYIVRG 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEVVIVDEFTGRVLAGRRWSDGLHQAIEAKERVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN P+ R DLP + RGKW +EVE + + GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRPSQRYDLPDAVYKAERGKWMAVAEEVEELHQKGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE LS+LL+Q+ IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSELLSNLLRQKEIPHNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLS--EIKLGSSSLAL 449
RGTDIILGGN +++ I + L+ PK++ E +L + +L
Sbjct: 501 RGTDIILGGNSDYMSRLKIREYLM------------------PKLVKPEEDELAVNVPSL 542
Query: 450 LAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLG--- 506
K + + + K+W + + F + LKE K+ Q LG
Sbjct: 543 GGKRSRPQGFASDKKVKTW--KASPDIFPTELSEETVKALKEAVKIAVDQHGQQSLGELE 600
Query: 507 ------------PTVAL-------TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHES 547
PT + Y + + E+ S E +EV LGGLHV+GT HES
Sbjct: 601 AEEKIAIASENAPTDDIVIQKLREVYKKIRAEYEIFTSKEHNEVVELGGLHVMGTERHES 660
Query: 548 RRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDA 607
RRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ + +EDMPIE
Sbjct: 661 RRIDNQLRGRAGRQGDPGSTRFFLSLEDNLLKIFGGDR--VARLMDALQVEEDMPIESGM 718
Query: 608 IVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYM 667
+ R L G Q E YY+ IRK + E+DEV+ QRK +Y R+ +L G + +Q+ QY
Sbjct: 719 LTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAIYAERRRVLEGLD--LKEQVLQYA 776
Query: 668 QAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFI 698
+ +DEI+ V+P P W L+ L +KEF+
Sbjct: 777 EKTMDEIVEAYVNPDLPPEEWDLNTLVSKVKEFV 810
>gi|52075758|dbj|BAD44978.1| putative SecA [Oryza sativa Japonica Group]
Length = 1021
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 381/914 (41%), Positives = 526/914 (57%), Gaps = 121/914 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 157 LRPFDVQLIGGMVLHKGEIAEMKTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 216
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+RR NY CDITY NSELGFDYLRDNLA ++LV+
Sbjct: 217 EWVGQVPRFLGLQVGLIQQNMTPEQRRENYLCDITYVTNSELGFDYLRDNLAMTVDELVL 276
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+AE+ + +HYTV+ K
Sbjct: 277 R---NFNYCVIDEVDSILIDEARTPLIISGLAEKPSDRYYKAAKIAEVFERDIHYTVDEK 333
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTEEG A AE L+ NDL+D + WA +V+NA+KAKE + RDV YIVR+ + LI+
Sbjct: 334 QRNVLLTEEGYADAEEILDINDLYDPREQWASYVLNAIKAKELFLRDVNYIVRSKEVLIV 393
Query: 218 NELTGRVE------EKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+E TGRV + RRWS+G+HQA+EAKEG+ IQ +++ +A I+YQ+ F +PKL GM
Sbjct: 394 DEFTGRVMPDVTFWQGRRWSDGLHQAIEAKEGVPIQNETITLASISYQNFFLQFPKLCGM 453
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE +EF ++++ V VPTN P IR D F GKW A E+ M ++GR
Sbjct: 454 TGTAATESQEFESIYKLKVTVVPTNKPMIRKDESDVVFRATNGKWRAAVVEISRMNKVGR 513
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS+ L + GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAG
Sbjct: 514 PVLVGTTSVEQSETLSEQLHEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAG 573
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-------VLSEIKLGS 444
RGTDIILGGN + +A+ + + L+ + V + K +SPK L +L
Sbjct: 574 RGTDIILGGNAEFMARLKLREMLMPRVVDPLDGVIISKKQASPKKTWKTNESLFPCELSK 633
Query: 445 SSLALLAKAALLAKYVGKAEG-KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMY 503
+L+ + ++ +A KA G KS T EA+ S S E + + + + + +SA
Sbjct: 634 DALSYVKESVEVAV---KAWGEKSLTELEAEERLSYSCEKGPTRD----EVIANLRSA-- 684
Query: 504 PLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGD 563
++ ++ + +V+ E +V GGLHV+GT HESRRIDNQLRGR+GRQGD
Sbjct: 685 ---------FMKIMDEYKVYTEEEKKQVISAGGLHVVGTERHESRRIDNQLRGRSGRQGD 735
Query: 564 PGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYY 623
PGS+RF +SL+D +F+ F D + R+ ED+PIE + R L Q E Y+
Sbjct: 736 PGSSRFFLSLEDNIFRIFGGDRIQGLMQAFRV---EDLPIESKMLTRALDEAQRKVENYF 792
Query: 624 FGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK 683
F IRK L E+DEVL QR VY R+ L A++S I +Y + +D+I+ N+ P
Sbjct: 793 FDIRKQLFEYDEVLNSQRDRVYAERRRAL--ASDSLESLIVEYAELTIDDILEANIGPDT 850
Query: 684 HPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKP 743
W L KL+ + +LDDL
Sbjct: 851 PREDWDLSKLIAKLQQYC-YLLDDL----------------------------------T 875
Query: 744 PNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD 803
P L G KSSS +DL + R R +K +I+ +++E+
Sbjct: 876 PELLEG---KSSSY--------EDLQEYLRTRGREAYYQK--AEIVEKQAPGLMKEA--- 919
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M+
Sbjct: 920 -------ERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMM 972
Query: 864 SATRRLTVESLVQY 877
+ RR + S+ Q+
Sbjct: 973 AQIRRNVIYSVYQF 986
>gi|428222832|ref|YP_007107002.1| Preprotein translocase subunit SecA [Synechococcus sp. PCC 7502]
gi|427996172|gb|AFY74867.1| preprotein translocase, SecA subunit [Synechococcus sp. PCC 7502]
Length = 928
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 372/918 (40%), Positives = 521/918 (56%), Gaps = 107/918 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 79 LRHYDVQLLGGMVLHKGQIAEMKTGEGKTLVSTLPSYLNALTGKGVHIVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VG++Q+GM P ER+ NY CDITYT NSELGFDYLRDN+A + + +V
Sbjct: 139 EWMGQVHRFLGLTVGIVQQGMEPLERQRNYACDITYTTNSELGFDYLRDNMATSMQDVVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDSVLIDE R PL+ISG+ + +Y A+ +A L + HY V+ K
Sbjct: 199 R---PFNYCVIDEVDSVLIDEARTPLIISGQLERPTEKYMGASAIAWKLEKEKHYEVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L DL+D+ DPWA +V NA+KAKE + +DV YIVR+ + +I+
Sbjct: 256 QRTVILTDEGFEEAENLLGVTDLFDQQDPWAHYVFNAIKAKELFLKDVNYIVRDDQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + I+ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 316 DEFTGRVMPGRRWSDGLHQAIEAKEQVTIENETQTLASITYQNFFLLYPKLAGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN + R DL + T KW E + M LGRPVLVG+
Sbjct: 376 EEAEFGKIYNLEVTTIPTNRISGRKDLSDVVYKTEAAKWRAVAIECQEMHELGRPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE +S LL +Q IPHN+LNA+P+ RE+E +AQAGRK A+TI+TNMAGRGTDII
Sbjct: 436 TSVEKSEVISRLLSEQNIPHNLLNAKPENVERESEIIAQAGRKGAVTIATNMAGRGTDII 495
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + R N ++ + P S + + L A +
Sbjct: 496 LGGNVDYMARLKVREFFMPKIVRTD-NDDLMGQLLFPNSPSPAQGFGTPKKLKTWKATPS 554
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVAL------ 511
+ A+ T KS +VE + +L ELQ D + PT L
Sbjct: 555 IF--PADLSPSTKAILKSAVDYAVETLGAQSLPELQAE-DMLAVASEKAPTNDLVIQKLR 611
Query: 512 -TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM 570
Y+++ ++ E + E +EV LGGLHVIGT HESRRIDNQLRGR GRQGDPGSTRF
Sbjct: 612 AAYIAIKQEYEAFTTTEHNEVTGLGGLHVIGTERHESRRIDNQLRGRCGRQGDPGSTRFF 671
Query: 571 VSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
+SL+D + + F+ D A+ R+ +EDMPI + R L G Q E +Y+ RK +
Sbjct: 672 LSLEDNLMRIFAGDRVAAMMNAFRV--EEDMPISSGLLTRSLEGAQKKVETFYYDTRKQV 729
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
E+DEVL QR+ +Y R +L G + ++ +Y + +D+I+ V+P W L
Sbjct: 730 FEYDEVLNNQRRAIYSERFRVLEG--QDLRNRVIEYAEMTMDDIVKAYVNPDLPSEEWDL 787
Query: 691 D---KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
K +KEFI +L DL +E L ++ +FP++
Sbjct: 788 ASVVKKVKEFI----NLLQDL-----------EVEHLDQM--------FFPEIQA---FL 821
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
R R++ +K Q + M
Sbjct: 822 REEVRRAYEIKEQ-------------------------------------QVDSFQPGLM 844
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
++ ER +++ +D WR+HL M L +V +R +G ++PL EYK +G F+ ML+ R
Sbjct: 845 RQAERFFILQQIDTLWREHLQAMEGLRESVGLRGYGQKDPLIEYKSEGYELFLDMLTDIR 904
Query: 868 RLTVESLVQYWSSPMESQ 885
R V SL ++ P ++
Sbjct: 905 RNVVYSLFEFNPQPQPTK 922
>gi|390439644|ref|ZP_10228027.1| Protein translocase subunit secA [Microcystis sp. T1-4]
gi|389836924|emb|CCI32151.1| Protein translocase subunit secA [Microcystis sp. T1-4]
Length = 938
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 376/924 (40%), Positives = 517/924 (55%), Gaps = 135/924 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGQIDRPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQERKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
+DEI+ V+P W L+KL+ + F + D K +E E++
Sbjct: 779 MDEIVMAYVNPELPAEEWDLEKLISK---------SQEFVYLLADITAKDVE---EMSVN 826
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
DI F ++ RK+ +K R N+ + D
Sbjct: 827 DIKMFLHEEV-----------RKAYEIKE---------------RQVDNIRAGLMRD--- 857
Query: 791 ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
ER +++ +D WR+HL M L ++ +R +G ++PL E
Sbjct: 858 -------------------AERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDPLIE 898
Query: 851 YKIDGCRFFISMLSATRRLTVESL 874
YK +G F+ M+ RR V SL
Sbjct: 899 YKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|428225899|ref|YP_007109996.1| protein translocase subunit secA [Geitlerinema sp. PCC 7407]
gi|427985800|gb|AFY66944.1| protein translocase subunit secA [Geitlerinema sp. PCC 7407]
Length = 931
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 374/912 (41%), Positives = 512/912 (56%), Gaps = 107/912 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IG VLHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 77 MRHFDVQMIGAMVLHDGQIAEMKTGEGKTLVATLPAYLNAISGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQGMNPAERKRNYDCDITYATNSEIGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDSVL+DE R PL+ISG+ + +Y AA+VA L Y V+ K
Sbjct: 197 R---PFNYCVIDEVDSVLVDEARTPLIISGQVERPSEKYLRAAEVARALQSEEDYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L DL+D DPWA +V NA+KAKE + +DV YIVRN + +I+
Sbjct: 254 ARNVLLTDEGFIKAERELNVQDLFDPKDPWAHYVFNAIKAKELFIKDVNYIVRNDEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNFFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN +R DL + T KW E M GRPVLVG+
Sbjct: 374 EEAEFEKIYNLEVTIIPTNRTRLRQDLSDVVYKTEEAKWRAIADECAQMHEAGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL+++ +PHN+LNA+P+ RE+E VAQAGR A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEVLSALLRERNVPHNLLNAKPENVERESEIVAQAGRGGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + L+ + + E +D+ +V S AA +
Sbjct: 494 LGGNAEYMARLKVREYLMPRIVKP----EDEDEFGVMRVPGAGAGRSGGQGFAGTAAKVK 549
Query: 458 KY-----VGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQ--KLI----DKQSAMYPLG 506
+ + + Q+ K +V+ +L EL+ LI +K P+
Sbjct: 550 TWKASPDIFPNDLPKEIEQQLKDAVEFAVKQHGERSLPELEAEDLIAVASEKAPTQNPVI 609
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
+ Y +V + E S E V + GGL+VIGT HESRRIDNQLRGRAGRQGDPGS
Sbjct: 610 QHIRDAYNAVRHEYERFTSTEHEAVVQRGGLYVIGTERHESRRIDNQLRGRAGRQGDPGS 669
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
T+F +SLQD + + F D ++ +EDMPIE + R L G Q E YY+ I
Sbjct: 670 TKFFLSLQDNLLRIFGGDR--VAGFMNAFRVEEDMPIESGMLTRSLEGAQRKVETYYYDI 727
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK + E+DEV+ QR+ +Y R+ +L G + +Q+ Y + + +I+ V+P
Sbjct: 728 RKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVITYAEKTMSDIVDAYVNP----- 780
Query: 687 YWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
ELP PD PNL
Sbjct: 781 ------------------------------------ELP------------PDEWDLPNL 792
Query: 747 FRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIASYLNVVQESRYDDV 805
+ +K ++ + SD L + N ++ +L + + IA L Q +
Sbjct: 793 V-------NKVKEFVYLLSD-LEPAQLEDFSVNEIKTFLHEQVRIAYDLKEAQIDQIQPG 844
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++ ER +++ +D WR+HL M+ L +V +R +G R+PL EYK +G F+ M++
Sbjct: 845 LMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQRDPLIEYKSEGYELFLDMMTN 904
Query: 866 TRRLTVESLVQY 877
RR V SL Q+
Sbjct: 905 IRRDVVYSLFQF 916
>gi|443654958|ref|ZP_21131431.1| preprotein translocase, SecA subunit [Microcystis aeruginosa
DIANCHI905]
gi|159027505|emb|CAO89469.1| secA [Microcystis aeruginosa PCC 7806]
gi|443333687|gb|ELS48233.1| preprotein translocase, SecA subunit [Microcystis aeruginosa
DIANCHI905]
Length = 937
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 376/924 (40%), Positives = 518/924 (56%), Gaps = 135/924 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGQIDRPTEKYILAAEIAKQLVRQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPDKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
+DEI+ ++P W L+KL+ + F + D K IE +++
Sbjct: 779 MDEIVMAYINPELPAEEWDLEKLISK---------SQEFVYLLADITAKDIE---DMSVN 826
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
DI F ++ RK+ +K R N+ ++ D
Sbjct: 827 DIKMFLHEEV-----------RKAYEIKE---------------RQVDNIRAGFMRD--- 857
Query: 791 ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
ER +++ +D WR+HL M L ++ +R +G ++PL E
Sbjct: 858 -------------------AERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDPLIE 898
Query: 851 YKIDGCRFFISMLSATRRLTVESL 874
YK +G F+ M+ RR V SL
Sbjct: 899 YKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|425434319|ref|ZP_18814788.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9432]
gi|389676237|emb|CCH94725.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9432]
Length = 937
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 376/915 (41%), Positives = 514/915 (56%), Gaps = 117/915 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSE------IKLGSS 445
RGTDIILGGN +A+ I + L+ L + E D+ S L E G
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLMPKL----VMPEDDNLAFSLPSLGERNRPQGFAPGKK 556
Query: 446 SLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKL---IDKQSAM 502
A A + + K + +EA F ++ + L+ +K+ +K
Sbjct: 557 KKNWRASAEIFPTELPKEVENAL--KEAVKFAVDTHGTQSLLELEAEEKIAIAAEKAPTD 614
Query: 503 YPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
P+ + Y + K E + E EV GGLHVIGT HESRRIDNQLRGRAGRQG
Sbjct: 615 DPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRIDNQLRGRAGRQG 674
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPGSTRF +SL+D + + F D L+ +EDMPIE + R L G Q E +
Sbjct: 675 DPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTRSLEGAQRKVETF 732
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +DEI+ ++P
Sbjct: 733 YYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKTMDEIVMAYINPE 790
Query: 683 KHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPK 742
W L+KL+ + F + D K IE E++ DI F ++
Sbjct: 791 LPAEEWDLEKLISK---------SQEFVYLLADITAKDIE---EMSVNDIKMFLHEEV-- 836
Query: 743 PPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRY 802
RK+ +K E +
Sbjct: 837 ---------RKAYEIK----------------------------------------ERQV 847
Query: 803 DDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
D++ +M++ ER +++ +D WR+HL M L ++ +R +G ++PL EYK +G F
Sbjct: 848 DNIRAGFMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDPLIEYKQEGYEMF 907
Query: 860 ISMLSATRRLTVESL 874
+ M+ RR V SL
Sbjct: 908 LEMMIDIRRNVVYSL 922
>gi|443476770|ref|ZP_21066659.1| protein translocase subunit secA [Pseudanabaena biceps PCC 7429]
gi|443018236|gb|ELS32524.1| protein translocase subunit secA [Pseudanabaena biceps PCC 7429]
Length = 936
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 369/929 (39%), Positives = 518/929 (55%), Gaps = 131/929 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 79 LRHYDVQMLGGMVLHRGEIAEMKTGEGKTLVATLPSYLNALSGKGVHVVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLG+SVGLIQ M P ERR NY CDITY NSELGFDYLRDN+A + E++V
Sbjct: 139 EWMGQVHRFLGMSVGLIQNSMEPFERRKNYSCDITYATNSELGFDYLRDNMATSIEEVVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F ++DEVDS+LIDE R PL+ISG + +Y A +A L + HY V+ K
Sbjct: 199 R---PFNFCVIDEVDSILIDEARTPLIISGMVERPTEKYIGAVTIAAQLQKETHYEVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +T+EG LAE L DL+D+ DPWA +V NALKAKE + +DV YIVR+ + I+
Sbjct: 256 QRNVIMTDEGFELAEKLLNVTDLFDQADPWAHYVFNALKAKELFLKDVNYIVRDDEVTIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F LYPKL GMTGTAKT
Sbjct: 316 DEFTGRVMPGRRWSDGLHQAIEAKEGVAIENETQTLATITYQNFFLLYPKLGGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + V +PTN + R D + T KW +E M +GRPVLVG+
Sbjct: 376 EEAELGKIYNLEVTTMPTNRKSGRGDWSDVVYKTEAAKWRAVAEECREMHEMGRPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL ++ IPHN+LNA+P+ RE+E VAQAGRK ++TI+TNMAGRGTDII
Sbjct: 436 TSVEKSEVLSRLLSEKNIPHNLLNAKPENVERESEIVAQAGRKGSVTIATNMAGRGTDII 495
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + R + D + ++ E K
Sbjct: 496 LGGNADYMARLKVRESFMPQIVRP--EDDSDFTNAGQRMFGERP---------EKGQGFG 544
Query: 458 KYVGKAEGKSWTY----------QEAKSFFSESVE--------MSQSMNLKELQKLIDKQ 499
KA K+W ++A++ ++V+ MSQS E ++++
Sbjct: 545 SNTEKARKKNWKVSDSLFPCELSKDAQALLKDAVDFAVDKLGRMSQSE--LEAEEMLAVA 602
Query: 500 SAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
S P V ++ + ++ E E +V +LGGLHVIGT HESRR+DNQLR
Sbjct: 603 SEKAPTEDEVTQKLRDAFILIKREYEAVTDAEHEDVTKLGGLHVIGTERHESRRVDNQLR 662
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GR GRQGDPGSTRF +SL+D + + F+ D L++ +EDMPI + L
Sbjct: 663 GRCGRQGDPGSTRFFLSLEDNLMRIFAGDR--VAGLMNAFRVEEDMPISSGMLTSALENA 720
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G E+ ++ +Y + +D+I+
Sbjct: 721 QKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--ENLRDRVIEYAERTMDDIV 778
Query: 676 FGNVDPLKHPRYWSLD---KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDI 732
V+P P W+L K +KEF+ LL+ +E PE +
Sbjct: 779 NAYVNPELPPEEWNLVAMVKKIKEFV-----------------NLLQDLE--PE----QL 815
Query: 733 NNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIAS 792
++ + P++ R R++ +K A +L+ L
Sbjct: 816 DDMFLPEMQA---FLREEVRRAYEIKE----------------AQVEVLQAGL------- 849
Query: 793 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
M++ ER +++ +D WRDHL M L +V +R +G ++PL EYK
Sbjct: 850 --------------MRQAERFFILQRIDTLWRDHLQAMEALRESVGLRGYGQKDPLIEYK 895
Query: 853 IDGCRFFISMLSATRRLTVESLVQYWSSP 881
+G F+ M++ RR V SL ++ P
Sbjct: 896 SEGYEIFLDMMTQIRRDVVYSLFEFDPRP 924
>gi|242057233|ref|XP_002457762.1| hypothetical protein SORBIDRAFT_03g013090 [Sorghum bicolor]
gi|241929737|gb|EES02882.1| hypothetical protein SORBIDRAFT_03g013090 [Sorghum bicolor]
Length = 1008
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 374/909 (41%), Positives = 513/909 (56%), Gaps = 117/909 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 150 LRPFDVQLIGGMVLHKGEIAEMKTGEGKTLVAILPAFLNALSGKGVHVVTVNDYLARRDC 209
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+RR NY CDITY NSELGFDYLRDNLA ++LV+
Sbjct: 210 EWVGQVPRFLGLQVGLIQQNMTPEQRRENYSCDITYVTNSELGFDYLRDNLAMTVDELVL 269
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+A+ + +HYTV+ K
Sbjct: 270 R---NFNYCVIDEVDSILIDEARTPLIISGLAEKPSDRYYKAAKIADAFERDIHYTVDEK 326
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTEEG A AE L+ NDL+D + WA +V+NA+KAKE + +DV YIVR+ + LI+
Sbjct: 327 QRNVLLTEEGYADAEEILDINDLYDPREQWASYVLNAIKAKELFLKDVNYIVRSKEVLIV 386
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEG+ IQ +++ +A I+YQ+ F +PKL GMTGTA T
Sbjct: 387 DEFTGRVMPGRRWSDGLHQAIEAKEGVSIQNETITLASISYQNFFLQFPKLCGMTGTAAT 446
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF ++++ V VPTN P IR D F GKW E+ M ++GRPVLVG+
Sbjct: 447 ETQEFESIYKLKVTVVPTNKPMIRKDDSDVVFRATNGKWRAVLVEISRMNKVGRPVLVGT 506
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS+ L++ GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 507 TSVEQSESLSEQLREAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 566
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-------VLSEIKLGSSSLALL 450
LGGN + +A+ + + L+ + V V K P+ L +L +L+ +
Sbjct: 567 LGGNAEFMARLKLREILMPRVVNPIDGVIVSKKQMPPRKTWKTNESLFPCELSKETLSSV 626
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVA 510
+A V + KS T EA+ S S E + + + + + ++A
Sbjct: 627 KDTVEMA--VKEWGEKSLTELEAEERLSYSCEKGPTRD----EVIANLRNA--------- 671
Query: 511 LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM 570
++ + + +V E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 672 --FMKIADEYKVFTEEEKKKVITAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFF 729
Query: 571 VSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
+SL+D +F+ F D + R+ ED+PIE + R L Q E Y+F IRK L
Sbjct: 730 LSLEDNIFRIFGGDRIQGLMQAFRV---EDLPIESKMLTRALDEAQRKVENYFFDIRKQL 786
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
E+DEVL QR VY R+ L A++S I +Y + +D+I+ N+ P W L
Sbjct: 787 FEYDEVLNSQRDRVYAERRRAL--ASDSLESLIVEYAELTMDDILEANIGPDTPKENWDL 844
Query: 691 DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGI 750
KL+ + +LDDL P L G
Sbjct: 845 SKLIAKLQQYC-YLLDDL----------------------------------TPELLEGK 869
Query: 751 RRKSSSLKRWLAICSDDLTKNGR--YRATTNLLRKYLGDILIASYLNVVQESRYDDVYMK 808
L+ + L K GR Y T ++ K + MK
Sbjct: 870 SSSYEDLREY-------LRKRGREAYFQKTEIVEKQAPGL------------------MK 904
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
E ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 905 EAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRR 964
Query: 869 LTVESLVQY 877
+ S+ Q+
Sbjct: 965 NVIYSVYQF 973
>gi|425461468|ref|ZP_18840946.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9808]
gi|389825664|emb|CCI24389.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9808]
Length = 937
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 376/924 (40%), Positives = 516/924 (55%), Gaps = 135/924 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIANKLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQERKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENTLKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
+DEI+ ++P W L+KL+ + F + D K IE +++
Sbjct: 779 MDEIVMAYINPELPAEEWDLEKLISK---------SQEFVYLLADITAKDIE---DMSVN 826
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
DI F ++ RK+ +K R N+ ++ D
Sbjct: 827 DIKMFLHEEV-----------RKAYEIKE---------------RQVDNIRAGFMRD--- 857
Query: 791 ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
ER +++ +D WR+HL M L ++ +R +G ++PL E
Sbjct: 858 -------------------AERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDPLIE 898
Query: 851 YKIDGCRFFISMLSATRRLTVESL 874
YK +G F+ M+ RR V SL
Sbjct: 899 YKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|428163257|gb|EKX32338.1| hypothetical protein GUITHDRAFT_98620 [Guillardia theta CCMP2712]
Length = 1007
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 370/913 (40%), Positives = 524/913 (57%), Gaps = 132/913 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG VLH +AEM T VVTVNDYLA+RDA
Sbjct: 152 LRHYDVQMVGGMVLHQRKLAEMATGEGKTLVATLPSYLNALSGKGVHVVTVNDYLARRDA 211
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M ++HRFLGL+VGLIQ M PEERR+NY CDITY NSELGFDYLRDNLA E +V+
Sbjct: 212 ENMGQIHRFLGLTVGLIQAEMKPEERRANYGCDITYVTNSELGFDYLRDNLAIKPEDIVL 271
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+PF+F IVDE DS++IDE R PL+IS + + A+Y +AK+A +L + +HYTV+ K
Sbjct: 272 --TRPFNFCIVDEADSIMIDEARTPLIISEKTAAPAAKYANSAKIATVLEEKVHYTVDEK 329
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ SV LTE G + E L DL++ DPW+ +++NALKAK +++DVQY+VR + +I+
Sbjct: 330 SQSVTLTERGFSDVEKILNVKDLFNPKDPWSPYIINALKAKSLFKKDVQYVVRANEVMIV 389
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV E RRWS G+HQ+VEAKEGLK +++ VA ITYQS F+L+PKLSGMTGTA+T
Sbjct: 390 DEFTGRVLEGRRWSNGLHQSVEAKEGLKPSSETQTVASITYQSFFRLFPKLSGMTGTART 449
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E KEF ++ + V+ +PT LP R D P +F T GKW+ ++ G+P+L+G+
Sbjct: 450 EAKEFGDIYGLEVLSIPTALPVARRDNPDATFRTQAGKWKAVMGDIARRHTKGQPILIGT 509
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TS+ SE LS L+ + +PH VLNA+P+ RE E VAQAGR +AITI+TNMAGRGTDI+
Sbjct: 510 TSIAASEQLSKLMTELEVPHEVLNAKPEVVTRENEIVAQAGRAFAITIATNMAGRGTDIL 569
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSP-KVLSEIKLGSSSLALLAKAALL 456
LGGN AKK I +L L VD K P K EIK + + L
Sbjct: 570 LGGNSGFFAKKRIMQKLAPAL--------VDKKNGLPSKEAMEIKQNPACIPL------- 614
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAM---YPLGPTVALTY 513
++A + E+V+ + S L L ++D +S + GP A ++
Sbjct: 615 ----------PELSEQAVNKIDEAVQAAASA-LGSLPSMLDVESLLAVAAETGPVEAGSH 663
Query: 514 LSVLKDC--------EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
L L++ +V C E EV+ LGGLHVIGT HESRRID QLRGRAGRQGDPG
Sbjct: 664 LEKLREAYRVVKEEYDVRCKKEKEEVEDLGGLHVIGTERHESRRIDQQLRGRAGRQGDPG 723
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
S+RF ++L D +FQ F ++D L+ ++ +EDMP+E ++ L G+Q E+Y++
Sbjct: 724 SSRFFLALDDRLFQVFG---GTSIDGLLDKLKVEEDMPLEAKSVSDALDGVQRRVEEYFY 780
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
GIRK + ++DE+L QR+ +Y +R+ +T ++ S I +Y +EI+
Sbjct: 781 GIRKEMFKYDEILSSQRESIYSMRKKFVTEDSDYMSNTILEYCLDTAEEIV--------- 831
Query: 685 PRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPP 744
P Y +KE GK L++ + N K
Sbjct: 832 PNY------IKE-----GK-----------------------LDASGLAN-------KLA 850
Query: 745 NLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD 804
F GI+ K S + A+ S D + R +L + G+ L+ V+ES
Sbjct: 851 QFFDGIQLKDSDIA---ALKSRDEVRQVVRRQVEEVLERKEGE------LDAVKES---- 897
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
+ E+ER +++ +D W+ HL +++ L + +R++ +P E++ +G + ML
Sbjct: 898 -FSFEIERYIILTQVDLLWKQHLKDIDFLKDFIGLRAY-KGDPFIEFQQEGFELYQDMLK 955
Query: 865 ATRRLTVESLVQY 877
A RR TV S QY
Sbjct: 956 AVRRNTVYSFFQY 968
>gi|86605469|ref|YP_474232.1| preprotein translocase subunit SecA [Synechococcus sp. JA-3-3Ab]
gi|123724597|sp|Q2JW99.1|SECA_SYNJA RecName: Full=Protein translocase subunit SecA
gi|86554011|gb|ABC98969.1| preprotein translocase, SecA subunit [Synechococcus sp. JA-3-3Ab]
Length = 954
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 355/757 (46%), Positives = 468/757 (61%), Gaps = 72/757 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G IAEMKT +VTVN YLA+RD+
Sbjct: 80 LRHYDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNGYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGL+Q GM +E+R +Y CDITY NSELGFDYLRDN+A + ++++
Sbjct: 140 EWMGQVHRFLGLTVGLVQEGMSTDEKRRSYHCDITYCTNSELGFDYLRDNMATDIKEVMQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LIDE R PL+ISG+ ++ +Y AA+VA L++ HY V+ K
Sbjct: 200 R---PFNYCIIDEVDSILIDEARTPLIISGQMARPSEKYLKAAQVARELIRDEHYEVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L +DL+D DPWA FV NA+KAKE + RDV YIVRN + +I+
Sbjct: 257 ARNVILTDEGFEAAERLLGVSDLFDPKDPWAHFVFNAVKAKELFIRDVHYIVRNQEVVIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQAVEAKEG+ IQ +S +A ITYQ+LF LYPKLSGMTGTA+T
Sbjct: 317 DEFTGRVLPGRRWSDGLHQAVEAKEGVPIQNESQTLATITYQNLFLLYPKLSGMTGTART 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K + + V +PTN P R D P + T KW+ +E+ M GRPVLVG+
Sbjct: 377 EEAEFSKTYNLEVTVIPTNRPIRRKDAPDLVYKTENAKWKAVAEEIAHMHAQGRPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS +LK+ GIPHN+LNA+P+ REAE +AQAGRK A+TI+TNMAGRGTDII
Sbjct: 437 TSVEKSERLSAMLKEMGIPHNLLNAKPENVEREAEIIAQAGRKGAVTIATNMAGRGTDII 496
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + +RL+ L V++D LGS+S
Sbjct: 497 LGGNAEYMARLKLRERLMPKL------VQLDPDNP---------LGSASTTSRGGGQGFG 541
Query: 458 KYVGKAEGKSWTYQEAKSFFSE-SVEMSQSMN-----------LKELQKLI--------- 496
K + KSWT + E S SQ+++ L L +L+
Sbjct: 542 PASPKPK-KSWTVVSPNFYPCELSARTSQALDEVVAAAVAKYGLNRLPELVVEDLIAVAS 600
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
+K PL + Y S+ + E E EV RLGGLHVIGT HESRRIDNQLRG
Sbjct: 601 EKAPVQDPLILQLREVYNSIKAEYEKVTEAEHEEVVRLGGLHVIGTERHESRRIDNQLRG 660
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPGS+RF +SL+D + + F + L+ DEDMPIE + L Q
Sbjct: 661 RAGRQGDPGSSRFFLSLEDNLLKIFGGER--VAKLMDMFRVDEDMPIEHPLLSSSLENAQ 718
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YYF +RK + E+DEV+ QR+ +Y R+ IL G E+ +I YM+ V+EI+
Sbjct: 719 RKVEVYYFDLRKQVFEYDEVMNNQRRAIYSERRRILEG--ENLKPKILDYMRKTVEEIVR 776
Query: 677 GNVDPLKHPRYWSLDKL---LKEFIAIAGKIL--DDL 708
+V+P P W +DKL ++EF+ + + L DDL
Sbjct: 777 AHVNPELPPEEWEIDKLTAKMQEFVPLLKENLKADDL 813
>gi|422304126|ref|ZP_16391475.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9806]
gi|389790809|emb|CCI13346.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9806]
Length = 938
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 374/927 (40%), Positives = 519/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQERKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPEL 727
+DEI+ V+P W L+KL+ +EF+ + I + +++ E+
Sbjct: 779 MDEIVMAYVNPELPAEEWDLEKLISKSQEFVYLLADI---------------TAKDVEEM 823
Query: 728 NSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD 787
+ DI F ++ RK+ +K R N+ + D
Sbjct: 824 SVNDIKMFLHEEV-----------RKAYEIKE---------------RQVDNIRAGLMRD 857
Query: 788 ILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 858 ----------------------AERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V S+
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSM 922
>gi|427417277|ref|ZP_18907460.1| protein translocase subunit secA [Leptolyngbya sp. PCC 7375]
gi|425759990|gb|EKV00843.1| protein translocase subunit secA [Leptolyngbya sp. PCC 7375]
Length = 936
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 374/923 (40%), Positives = 507/923 (54%), Gaps = 135/923 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLHDG IAEMKT +VTVNDYLA+RDA
Sbjct: 77 MRHYDVQLIGGMVLHDGQIAEMKTGEGKTLVATLPAYLNALSGKGVHIVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+GM P ERR NY CDITY NSE GFDYLRDN+A++ E++V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQGMSPSERRKNYACDITYGTNSEFGFDYLRDNMASSIEEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+L+DE R PL+ISG+ + +Y AA +A L + Y V+ K
Sbjct: 197 R---PFNFCIIDEVDSILVDEARTPLIISGQVDRPQEKYERAADLARQLETEVDYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L+ DL+D DPWA FV NA+KAKE + +DV YIVRN + +I+
Sbjct: 254 ARNVLLTDEGFEKAENLLQVTDLFDPKDPWAHFVFNAVKAKELFVKDVNYIVRNDEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+ F LY KLSGMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKEHVPIQPETQTLASITYQNFFLLYDKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN P R D + T KW+ QE M GRPVLVG+
Sbjct: 374 EEAEFEKIYDIEVTIIPTNRPIARNDKSDVVYKTEPAKWKALAQECAEMHETGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL+Q + HN+LNA+P+ RE+E VAQAGR A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSGLLQQLNVDHNLLNAKPENVERESEIVAQAGRSGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ I + + + R P+ E G + +A + A
Sbjct: 494 LGGNSDYMARLKIREFFMPKIVR-------------PE--DEQGFGVAKVAAAGGSRTSA 538
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLI---------------DKQSAM 502
K K T++ + F + LK+ DK +
Sbjct: 539 KGFQSNGKKQKTWKASPEIFPTELSSETEKALKDAVAFAVKTYGPQSLSELGAEDKIATA 598
Query: 503 YPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
PT + Y +L + E E +V LGGLHVIGT HESRR+DNQLR
Sbjct: 599 AEKAPTEDPAIQKLRDVYKLILAEYEAFTDTEHDKVIELGGLHVIGTERHESRRVDNQLR 658
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GRAGRQGDPGST+F +SL+D + + F D L++ +EDMPIE + R L G
Sbjct: 659 GRAGRQGDPGSTKFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGA 716
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + + + Y + +D+I+
Sbjct: 717 QKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--DKLKELVIGYGEQTMDDIV 774
Query: 676 FGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDI 732
++P W L+ + +KEFI +L+DL A ++L L+ +I
Sbjct: 775 DAYINPELPSEEWDLENIVGKVKEFIY----LLEDLTA-----------DQLDNLSMGEI 819
Query: 733 NNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRY-RATTNLLRKYLGDILIA 791
F L+ + I D K G+ + L+R+
Sbjct: 820 KTF---------------------LREQVHIAYD--IKEGQVDKMKPGLMRE-------- 848
Query: 792 SYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEY 851
ER +++ +D WR+HL M+ L V +R +G ++PL EY
Sbjct: 849 ------------------AERFFILQQIDTLWREHLQQMDALRETVGLRGYGQKDPLIEY 890
Query: 852 KIDGCRFFISMLSATRRLTVESL 874
K +G F+ M++ RR V ++
Sbjct: 891 KSEGYEVFLDMMTGIRRNVVYTM 913
>gi|434402324|ref|YP_007145209.1| protein translocase subunit secA [Cylindrospermum stagnale PCC
7417]
gi|428256579|gb|AFZ22529.1| protein translocase subunit secA [Cylindrospermum stagnale PCC
7417]
Length = 930
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 381/928 (41%), Positives = 509/928 (54%), Gaps = 132/928 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +L+ G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILNSGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQASMNPSERQKNYDCDITYVTNSEIGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAFTLKPEEHYDVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAEAENLLGVTDLFDPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R D F T GKW E M LGRPVLVG+
Sbjct: 374 EEPEFEKIYKLEVAVIPTNRVRNRQDWSDMVFKTEPGKWRAIASECGEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LLK+ IPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSRLLKEMEIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLG-SSSLALLAKAALL 456
LGGN + +A+ + + + + R DD+ + G ++ L
Sbjct: 494 LGGNSEYMARLKLREYFMPRIVRP------DDEDT---------FGVQKAVGLPGGHGGG 538
Query: 457 AKYVGKAEGKSWT----------YQEAKSFFSESVEMS----QSMNLKELQKLIDKQSAM 502
+V + K+W +E + ++VE++ NL EL+ DK +
Sbjct: 539 QGFVPGKKVKTWRASPEIFPRELTKETEQLLKDAVEVAVKEYGDRNLPELEAE-DKVAVA 597
Query: 503 YPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
PT + Y V + E E EV LGGLHVIGT HESRRIDNQLR
Sbjct: 598 AEKAPTDDPVIKRLRAAYNRVKHEYEEFTVREHEEVVGLGGLHVIGTERHESRRIDNQLR 657
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L G
Sbjct: 658 GRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSLEGA 715
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G +
Sbjct: 716 QKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGYD------------------- 756
Query: 676 FGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNF 735
L ++ I A K +DD I +F
Sbjct: 757 -----------------LKEQVIKYAEKTMDD------------------------IVDF 775
Query: 736 YF-PDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIASY 793
Y P+LP + K LA DL + + L+ +L + + IA
Sbjct: 776 YINPELPSEEWELDKLVEKVKEFVYLLA----DLQPSQLEDMGVSELKAFLHEQVRIAYD 831
Query: 794 LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
+ Q + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 832 MKEAQIDQIQPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKS 891
Query: 854 DGCRFFISMLSATRRLTVESLVQYWSSP 881
+G F+ M+ RR V SL + P
Sbjct: 892 EGYELFLDMMVNIRRDVVYSLFMFQPQP 919
>gi|298491903|ref|YP_003722080.1| preprotein translocase subunit SecA ['Nostoc azollae' 0708]
gi|298233821|gb|ADI64957.1| preprotein translocase, SecA subunit ['Nostoc azollae' 0708]
Length = 930
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 371/928 (39%), Positives = 515/928 (55%), Gaps = 131/928 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILHSGQIAEMKTGEGKTLVATLPSYLNALTGQGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + ++V
Sbjct: 137 EWMGQVHRFLGLSVGLIQATMNPTERKKNYDCDITYVTNSEIGFDYLRDNMATSMPEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+L+DE R PL+ISG+ + +Y AA++A L + HY V K
Sbjct: 197 R---PFNYCVIDEVDSILVDEARTPLIISGQVERPTEKYLQAAEIAFTLQKDEHYDVNEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ +V LT+EG A AE L DL+D +PWA FV NA+KAKE + +DV YIVRN + +I+
Sbjct: 254 DRNVILTDEGFAEAESLLGVTDLFDPENPWAHFVFNAIKAKELFLKDVNYIVRNDEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DL F T GKW +E M+ GRPVLVG+
Sbjct: 374 EEVEFEKIYKLEVTVIPTNRIRRREDLSDMVFKTEPGKWRAIAKECAEMYENGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ IPH +LNARP+ REAE VAQAGR+ +TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLKEINIPHELLNARPENVEREAEIVAQAGRRGGVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + + SP+ + +S +A +
Sbjct: 494 LGGNSEYMARLKLREYFM-------------PRIVSPEDEDVFSMQRASGLPMAASGGAQ 540
Query: 458 KYVGKAEGKSWTY----------QEAKSFFSESVEMS----QSMNLKELQKLIDKQSAMY 503
+V + K+W +E + E+VE++ S +L EL+ DK +
Sbjct: 541 GFVPGKKVKTWRASPEVFPTQLSKETEQLLKEAVEVAVKAYGSRSLPELEAE-DKVAVAA 599
Query: 504 PLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
PT + Y + + E S+E +V GGLHVIGT HESRRIDNQLRG
Sbjct: 600 EKAPTDDPVIQKLREAYQRIKHEYEEFTSSEHDDVVSRGGLHVIGTERHESRRIDNQLRG 659
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPG+TRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 660 RAGRQGDPGTTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSLEGAQ 717
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YY+ IRK + E+DEV+ QR+ +Y R+ +L G +
Sbjct: 718 KKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGQD-------------------- 757
Query: 677 GNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
L ++ I A K +DD+ +N +
Sbjct: 758 ----------------LKEQVIKYAEKTMDDI-----------------------VNYYI 778
Query: 737 FPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNV 796
PDLP + K LA D+ + + ++ +L + +Y
Sbjct: 779 NPDLPSEEWELEKLVEKVKEFVYLLA----DMQASQLEDMGVSEIKAFLHEQARIAY--D 832
Query: 797 VQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
++E++ D + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 833 MKEAQIDQIQPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKS 892
Query: 854 DGCRFFISMLSATRRLTVESLVQYWSSP 881
+G F+ M+ RR V SL + P
Sbjct: 893 EGYELFLDMMVNIRRDVVYSLFMFQPQP 920
>gi|186681427|ref|YP_001864623.1| preprotein translocase subunit SecA [Nostoc punctiforme PCC 73102]
gi|226732222|sp|B2IUA9.1|SECA_NOSP7 RecName: Full=Protein translocase subunit SecA
gi|186463879|gb|ACC79680.1| preprotein translocase, SecA subunit [Nostoc punctiforme PCC 73102]
Length = 930
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 377/922 (40%), Positives = 509/922 (55%), Gaps = 134/922 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGIILHVGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSSMTPSERQKNYDCDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAFTLKKDEHYDVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAEAENLLGVTDLFDPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE +IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHEEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DL F T GKW +E M LGRPVLVG+
Sbjct: 374 EEPEFEKIYKLEVAVIPTNRDRRREDLSDMVFKTEAGKWGAIARECAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLKQ IPH +LNARP+ REAE VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLKQLEIPHELLNARPENVEREAEIVAQAGRKGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIED----RLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKA 453
LGGN + +A+ + + R+++ ++ V+ P L G
Sbjct: 494 LGGNSEYMARLKLREYFMPRIVMPEDEDSFGVQ------RPAGLPTGHGGGQG------- 540
Query: 454 ALLAKYVGKAEGKSWT----------YQEAKSFFSESVEMS------QSMNLKELQKLID 497
+V + K+W +E + ++VE++ +S+ E + +
Sbjct: 541 -----FVPGKKVKTWRASPEIFPTQLTKETEKLLKDAVEIAVREYGDRSLPELEAEDKVA 595
Query: 498 KQSAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQ 553
+ P+ V L Y V ++ E + E EV +GGLHVIGT HESRRIDNQ
Sbjct: 596 VAAEKAPIDDPVILKLREAYNRVKQEYEQFTTREHDEVVGIGGLHVIGTERHESRRIDNQ 655
Query: 554 LRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLL 613
LRGRAGRQGDPG+TRF +SL+D + + F D L++ +EDMPIE + R L
Sbjct: 656 LRGRAGRQGDPGTTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSLE 713
Query: 614 GLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDE 673
G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G +
Sbjct: 714 GAQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGQD----------------- 756
Query: 674 IIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDIN 733
L ++ I A K +DD+ ++
Sbjct: 757 -------------------LKEQVIKYAEKTMDDI-----------------------VD 774
Query: 734 NFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIAS 792
+ DLP + K LA DL N T ++ +L + + IA
Sbjct: 775 YYINIDLPSEEWELEKLVEKVKEFVYLLA----DLQPNQLEDMTVGEIKAFLHEQVRIAY 830
Query: 793 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
L Q + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 831 DLKEAQIDQVQPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYK 890
Query: 853 IDGCRFFISMLSATRRLTVESL 874
+G F+ M+ RR V SL
Sbjct: 891 SEGYELFLDMMVNIRRDVVYSL 912
>gi|440752141|ref|ZP_20931344.1| preprotein translocase, SecA subunit [Microcystis aeruginosa
TAIHU98]
gi|440176634|gb|ELP55907.1| preprotein translocase, SecA subunit [Microcystis aeruginosa
TAIHU98]
Length = 937
Score = 630 bits (1625), Expect = e-177, Method: Compositional matrix adjust.
Identities = 375/927 (40%), Positives = 516/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E GRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFMGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E ++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEAEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRTSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQYAEKT 778
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
+DEI+ ++P W L+KL+ + F + D K IE E++
Sbjct: 779 MDEIVMAYINPELPAEEWDLEKLISK---------SQEFVYLLADITAKDIE---EMSVN 826
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
DI F ++ RK+ +K
Sbjct: 827 DIKMFLHEEV-----------RKAYEIK-------------------------------- 843
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
E + D++ +M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 844 --------ERQVDNIRAGFMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|254416702|ref|ZP_05030452.1| preprotein translocase, SecA subunit [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176442|gb|EDX71456.1| preprotein translocase, SecA subunit [Coleofasciculus
chthonoplastes PCC 7420]
Length = 932
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 375/926 (40%), Positives = 512/926 (55%), Gaps = 141/926 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGVVLHRGEIAEMKTGEGKTLVSTLPAYLNALSGKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ GM P ER+ NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSGMGPAERQRNYACDITYATNSELGFDYLRDNMATSMSEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDSVLIDE R PL+ISG+ + Y AA++A++L HY V+ K
Sbjct: 204 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPTQNYMKAAQIAKMLQPEEHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE LE DL+D +PWA ++ NA+KAKE + DV YIVRN + +I+
Sbjct: 261 ARNVILTDEGFIEAEKLLEVGDLYDPENPWAHYIFNAIKAKELFTNDVNYIVRNDEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 321 DEFTGRVLQGRRWSDGLHQAIEAKEGVEIQKETQTLATITYQNFFLLYPKLAGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN P R D+ + T KW+ +E M GRPVLVG+
Sbjct: 381 EEAEFEKIYNLRVTIIPTNKPPGRRDMSDVVYKTEEAKWKAVARECADMHEQGRPVLVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL Q +PHN+LNARP+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 441 TSVEKSEVLSRLLSQLDVPHNLLNARPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +++ L RE ++ V+ E + S A+ +
Sbjct: 501 LGGNADYMSR---------LKVREYFMPQI--------VIPEEE--DSFAAMAGGGGKRS 541
Query: 458 KYVGKAEGKSW-TYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPL----------- 505
+ G A GK T++ + + + L E K +Q L
Sbjct: 542 QAQGFAPGKKVKTWKVSPQIYPTQLSPETEQKLIEAVKFAVQQYGERSLPELEAEEKIAI 601
Query: 506 ----GPT-------VALTYLSVLKDCEVHCSNEGSEV---KRLGGLHVIGTSLHESRRID 551
PT + +V K+ E E EV + +GGLHVIGT HESRRID
Sbjct: 602 AAENAPTDDPVIQKLREVCRAVRKEYEAFTHKEHDEVIYTEPIGGLHVIGTERHESRRID 661
Query: 552 NQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQ 611
NQLRGRAGRQGDPGST+F +SL+D + + F D +++ +EDMPIE + R
Sbjct: 662 NQLRGRAGRQGDPGSTKFFLSLEDNLLRIFGGDR--VAGMMNAFRVEEDMPIESGMLTRS 719
Query: 612 LLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +
Sbjct: 720 LEGAQKKVETFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVIQYAEKTM 777
Query: 672 DEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELN 728
D+I+ V+P P W + L ++EF+ +L DL E L ++
Sbjct: 778 DDIVDAYVNPDLPPEEWDIASLVSKVQEFVY----LLQDL-----------QPEHLDDMT 822
Query: 729 SIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDI 788
+I F ++ RK+ +K D + G R
Sbjct: 823 VTEIKTFLHEEV-----------RKAYDIKE----AQIDQIQPGLMR------------- 854
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
+ ER +++ +D WR+HL +M+ L +V +R +G ++PL
Sbjct: 855 --------------------QAERFFILQQIDTLWREHLQSMDALRESVGLRGYGQKDPL 894
Query: 849 EEYKIDGCRFFISMLSATRRLTVESL 874
EYK +G F+ M+ RR V SL
Sbjct: 895 IEYKQEGYETFLEMMIDIRRNVVYSL 920
>gi|357131997|ref|XP_003567619.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like
[Brachypodium distachyon]
Length = 935
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 372/908 (40%), Positives = 521/908 (57%), Gaps = 115/908 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 77 LRPFDVQLIGGMVLHKGEIAEMKTGEGKTLVAILPAYLNALSGRGVHVVTVNDYLARRDC 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+RR NY CDITY NSELGFDYLRDNLA ++LV+
Sbjct: 137 EWVGQVPRFLGLQVGLIQQNMTPEQRRENYLCDITYVTNSELGFDYLRDNLAMTVDELVL 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+AE Q +HYT + K
Sbjct: 197 R---NFNYCVIDEVDSILIDEARTPLIISGLAEKPSDRYYKAAKIAEAFEQDIHYTADEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G A AE L+ NDL+D + WA +V+NA+KAKE + RDV YIVR+ + LI+
Sbjct: 254 QRNVLLTEQGYADAEEILDINDLYDPREQWASYVLNAIKAKELFLRDVNYIVRSKEVLIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEG++IQ +++ +A I+YQ+ F +PKL GMTGTA T
Sbjct: 314 DEFTGRVMAGRRWSDGLHQAIEAKEGVQIQNETITLASISYQNFFLQFPKLCGMTGTAAT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E++EF ++++ V VPTN P IR D F GKW A E+ M ++GRPVLVG+
Sbjct: 374 EKQEFESIYKLKVTVVPTNKPMIRKDDSDVVFRATNGKWRAAVVEIARMNKVGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS+ L++ GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 434 TSVEQSETLSEQLREAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-------VLSEIKLGSSSLALL 450
LGGN + +++ + + L+ + V V K P+ L +L +L+ +
Sbjct: 494 LGGNAEFMSRLKLREMLMPRIVNPVDGVIVSKKQLPPRKTWKTNESLFPCELSKDTLSCV 553
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVA 510
A +A V + KS EA+ S S E + + + T+
Sbjct: 554 KDAVAVA--VKEWGEKSLPELEAEERLSYSCEKGPTCD---------------EVIATLR 596
Query: 511 LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM 570
+ + + +++ E ++V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 597 NAFKKIADEFKIYTEEEKNKVIATGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFF 656
Query: 571 VSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
+SL+D +F+ F D + R+ ED+PIE + R L Q E Y+F IRK L
Sbjct: 657 LSLEDNIFRIFGGDRIQGLMQAFRV---EDLPIESKMLTRALDEAQRKVENYFFDIRKQL 713
Query: 631 VEFDEVLEVQRKHVY-DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
E+DEVL QR VY + R+++ +G+ ES I +Y + +D+I+ N+ P W
Sbjct: 714 FEYDEVLNSQRDRVYAERRRALASGSLESL---IVEYAELTMDDILEANIGPDTPRESWD 770
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L KL+ + + +L+DL PEL
Sbjct: 771 LGKLIAK-VQQYCYLLNDL---------------TPEL---------------------- 792
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
+ K SS +DL + R R +K +I+ +++E+
Sbjct: 793 LESKCSSY--------EDLQEYLRTRGREAYFQK--AEIVEKQAPGLMKEA--------- 833
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 834 -ERFLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN 892
Query: 870 TVESLVQY 877
+ S+ Q+
Sbjct: 893 VIYSVYQF 900
>gi|170077875|ref|YP_001734513.1| preprotein translocase subunit SecA [Synechococcus sp. PCC 7002]
gi|226732256|sp|B1XL02.1|SECA_SYNP2 RecName: Full=Protein translocase subunit SecA
gi|169885544|gb|ACA99257.1| preprotein translocase, SecA subunit [Synechococcus sp. PCC 7002]
Length = 938
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 371/928 (39%), Positives = 515/928 (55%), Gaps = 142/928 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 84 MRHYDVQLLGGIVLHKGQIAEMRTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ M P E+ NYRCDITYT NSELGFDYLRDN+A +++V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSSMGPAEKIENYRCDITYTTNSELGFDYLRDNMATTIQEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R PF++ I+DEVDS+L+DE R PL+ISG+ + +Y AA++A+ LV +
Sbjct: 204 R---PFNYCIIDEVDSILVDEARTPLIISGQIERPTEKYLQAAEIAKQLVPQVEEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T+EG A AE L DL+DE +PWA ++ NA+KAKE +++DV YIVR
Sbjct: 261 YEVDEKARNVLMTDEGFAKAEQLLGVTDLYDEQNPWAHYIFNAVKAKELFKKDVNYIVRG 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGR+ RRWS+G+HQA+EA+EG+ IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 DEVVIVDEFTGRIMPGRRWSDGLHQAIEAQEGVTIQKETQTLANITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE EF K++ + V +PTN P R DL + + KW +E M GR
Sbjct: 381 TGTAKTEETEFEKVYNLEVTIIPTNRPTKRQDLADVVYKNEKAKWRAVAEECAQMHETGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE +S L + GIPHN+LNARP+ +E+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEIISAYLHELGIPHNLLNARPENVEKESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDIILGGN + +A+ L RE P+++ G+ ++A
Sbjct: 501 RGTDIILGGNSEYMAR---------LKMREYF---------MPQIVKPEDEGNFAIAGSG 542
Query: 452 KAALLAKY----------------VGKAEGKSWTYQEAKSFFSESVEMSQSMNLKEL--- 492
K + + + E + Q+ K +V+ + +L EL
Sbjct: 543 KNSGGQGFDTNNKQKKKTWKTTLDIYPTELPTDLEQQLKEAVKFAVDQYGNQSLTELEAE 602
Query: 493 QKLI---DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRR 549
+KL + P+ + Y ++ K S E EV + GGLHVIGT HESRR
Sbjct: 603 EKLAIASENAPTADPVVQKLRTVYHAIEKTYHDLTSVEHDEVIQNGGLHVIGTERHESRR 662
Query: 550 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIV 609
IDNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE +
Sbjct: 663 IDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESKMLT 720
Query: 610 RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQA 669
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY +
Sbjct: 721 NSLEGAQKKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIQYAEK 778
Query: 670 VVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPE 726
+ EI+ V+P P W LDKLL KEFI + L +
Sbjct: 779 TMSEIVEAYVNPELPPEEWKLDKLLDKAKEFIYL-----------------------LED 815
Query: 727 LNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLG 786
L DI + P++ L +R+ + DL + ++ L+R
Sbjct: 816 LEPKDIEDMTVPEIKT--FLHEEVRK------------AYDLKEAQVEKSQPGLMR---- 857
Query: 787 DILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRN 846
+ ER +++ +D WR+HL ++ L +V +R +G ++
Sbjct: 858 ----------------------QAERFFILQQIDTLWREHLQAIDALRESVGLRGYGQKD 895
Query: 847 PLEEYKIDGCRFFISMLSATRRLTVESL 874
PL EYK +G F+ M+ RR V SL
Sbjct: 896 PLIEYKQEGYEMFLEMMIDIRRNVVYSL 923
>gi|254430686|ref|ZP_05044389.1| preprotein translocase, SecA subunit [Cyanobium sp. PCC 7001]
gi|197625139|gb|EDY37698.1| preprotein translocase, SecA subunit [Cyanobium sp. PCC 7001]
Length = 961
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 382/944 (40%), Positives = 520/944 (55%), Gaps = 148/944 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 96 MRHFDVQLIGGMVLHDGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 155
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGLSVGLIQ+ M P +RR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 156 EWMGQIHRFLGLSVGLIQQDMTPYDRRDNYACDITYATNSELGFDYLRDNMATDIAEVVQ 215
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R FH+ ++DEVDS+LIDE R PL+ISG+ + +Y AA+VAE LV+
Sbjct: 216 R---DFHYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVAERLVRAAELGKDGI 272
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L +DL+D DPWA ++ NALKAKE + +DV
Sbjct: 273 DPEGDYEVDEKQRSCTLTDEGFAKAEEMLGVSDLFDPADPWAHYINNALKAKELFIKDVN 332
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 333 YIVRGSDAVIVDEFTGRVMPGRRWSDGQHQAIEAKENLPIQPETQTLASITYQNFFLLYP 392
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN P R D Q + T KW E+ +
Sbjct: 393 RLAGMTGTAKTEEVEFEKTYKLEVTVVPTNRPRSRADWTDQVYKTEPAKWRAVALEIAEV 452
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 453 NNSGRPVLVGTTSVEKSELLSALLAEQQIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 512
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTRE----------ALNVEVDDKTSSPKV 436
TNMAGRGTDIILGGN +A+ + + LL +L R + EV
Sbjct: 513 TNMAGRGTDIILGGNSDYMARLKLREVLLPVLVRPEEGHRPPVPLQRSAEVSGFGGGRGG 572
Query: 437 LSEIKLGSSSLALLAKAAL---------------LAKYVGKAEG-KSWTYQEAKSFFSES 480
GS+ A AL L++ + KA G +S T E + +++
Sbjct: 573 KGASPNGSAPSEARAIGALYPCELPEEQELALVTLSRELVKAWGDRSLTVLELEDRIAQA 632
Query: 481 VEMSQSMN--LKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLH 538
E + + + +++L++ I+ V TY +V+K E + V+ GGLH
Sbjct: 633 AEKAPTDDPQIQQLRECIN----------AVKATYDAVVK-------QEEARVREAGGLH 675
Query: 539 VIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITND 598
VIGT HESRR+DNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +
Sbjct: 676 VIGTERHESRRVDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVE 733
Query: 599 EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANES 658
EDMPIE + R L G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G
Sbjct: 734 EDMPIESGMLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYAERRRVLEGR--- 790
Query: 659 CSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLL 718
+L ++ I + +DD+
Sbjct: 791 ---------------------------------ELKQQVIGYGERTIDDI---------- 807
Query: 719 KSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATT 778
+ + PDLP P + + R + +K ++ + +DL T
Sbjct: 808 -------------VEAYVNPDLP--PEEW-DLSRLVAKVKEFIYLL-EDLEPEQLKGLGT 850
Query: 779 NLLRKYLGDILIASY-LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 837
L+ +L + + +Y + Q + M+E ER +++ +D WR+HL M+ L +V
Sbjct: 851 EELKAFLQEQMRNAYDIKEGQIEQQRPGLMREAERFFILQQIDTLWREHLQAMDALRESV 910
Query: 838 NVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+R +G ++PL EYK +G F+ M++ RR + S+ + +P
Sbjct: 911 GLRGYGQKDPLIEYKNEGYDMFLEMMTQMRRNVIYSMFMFQPAP 954
>gi|440684573|ref|YP_007159368.1| protein translocase subunit secA [Anabaena cylindrica PCC 7122]
gi|428681692|gb|AFZ60458.1| protein translocase subunit secA [Anabaena cylindrica PCC 7122]
Length = 929
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 370/919 (40%), Positives = 514/919 (55%), Gaps = 114/919 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILHSGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY+CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSTMTPSERQKNYQCDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
PF++ ++DEVDS+L+DE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 ---PPFNYCVIDEVDSILVDEARTPLIISGQVERPTEKYLQAAEIAFTLKKDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V L++EG A +E L DL+D DPWA F+ NA+KAKE + +DV YIVRN + +I+
Sbjct: 254 ARNVLLSDEGFAESENLLGVTDLFDPEDPWAHFMFNAIKAKELFLKDVNYIVRNDEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DL F T GKW QE M GRPVLVG+
Sbjct: 374 EEVEFEKIYKLEVAIIPTNRIRRREDLSDMVFKTELGKWRAIAQECAQMHENGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ IPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLKEIEIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAK-KIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
LGGN + +A+ K+ E + +++ E D+ + + S + +G S A +
Sbjct: 494 LGGNSEYMARLKLREYFMPRIVSPE------DEDSFGMQRASGLPMGHGSGQGFAPGKKV 547
Query: 457 AKYVGKAE-GKSWTYQEAKSFFSESVEMS----QSMNLKELQK------LIDKQSAMYPL 505
+ E + +E + E+VE++ +L EL+ +K P+
Sbjct: 548 KTWRASPEIFPTQLSKETEQLLKEAVEVAVKEYGERSLPELEAEDKVAVAAEKAPIDDPV 607
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
+ Y + + EV S E +V GGLHVIGT HESRRIDNQLRGRAGRQGDPG
Sbjct: 608 IQKLREAYQRIKHEYEVFTSTEHDDVVSRGGLHVIGTERHESRRIDNQLRGRAGRQGDPG 667
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
+TRF +SL+D + + F D L++ +EDMPIE + R L G Q E YY+
Sbjct: 668 TTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSLEGAQKKVETYYYD 725
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRK + E+DEV+ QR+ +Y R+ +L G +
Sbjct: 726 IRKQVFEYDEVMNNQRRAIYAERRRVLEGQD----------------------------- 756
Query: 686 RYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
L ++ I A K +DD+ ++ + PDLP
Sbjct: 757 -------LKEQVIKYAEKTMDDI-----------------------VDYYINPDLPSEEW 786
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
+ K LA D+ N ++ +L + +Y ++E++ D +
Sbjct: 787 ELEKLVEKVKEFVYLLA----DMQPNQLEDMGMGEIKAFLHEQARIAY--DMKEAQIDQI 840
Query: 806 ---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F+ M
Sbjct: 841 QPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKSEGYELFLDM 900
Query: 863 LSATRRLTVESLVQYWSSP 881
+ RR V SL + P
Sbjct: 901 MVNIRRDVVYSLFMFQPQP 919
>gi|218245936|ref|YP_002371307.1| preprotein translocase subunit SecA [Cyanothece sp. PCC 8801]
gi|226732186|sp|B7K110.1|SECA_CYAP8 RecName: Full=Protein translocase subunit SecA
gi|218166414|gb|ACK65151.1| preprotein translocase, SecA subunit [Cyanothece sp. PCC 8801]
Length = 935
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 381/930 (40%), Positives = 520/930 (55%), Gaps = 146/930 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQGGMNPEERKKNYGCDITYTTNSELGFDYLRDNMATAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R PF++ I+DEVDS+LIDE R PL+ISG+ + +Y AA +A L++
Sbjct: 204 R---PFNYCIIDEVDSILIDEARTPLIISGQVERPTEKYLQAAAIAAQLLKQESEDDPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T+ G AE L DL+D+++PWA ++ NA+KAKE + +DV Y++RN
Sbjct: 261 YEVDEKARNVLMTDAGFEKAEQLLNVQDLYDQDNPWAHYIFNAIKAKELFTKDVNYMIRN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 NEIVIVDEFTGRVLPGRRWSDGLHQAIEAKEGVEIQRETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DLP + T KW+ EVE + GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRISRRYDLPDVVYKTEDAKWQAVAGEVEELHHQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE LS LL+Q+ I HN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSEVLSKLLQQKKIHHNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDD---KTSSPKVLSEIKLGSSSLA 448
RGTDIILGGN +A+ I + L+ + + E DD S G+S
Sbjct: 501 RGTDIILGGNADYMARLKIREYLM----PQIVMPEDDDLMAGVSGNGGRRPQGFGTS--- 553
Query: 449 LLAKAALLAKYVGKAEGKSWT-----------YQEAKSFFSESVEMS------QSMNLKE 491
K +GK+W+ QE + E+V+ + QS+ E
Sbjct: 554 -------------KKKGKNWSPSDADIFPTKMSQETEEILKEAVKFAVEQYGQQSLTELE 600
Query: 492 LQKLIDKQSAMYPLGPTVA----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHES 547
++ I S P +V + Y ++ K E E EV LGGLHVIGT HES
Sbjct: 601 AEEKIAIASENAPTDDSVVEKLRVVYKAIRKTYETVTDQEHDEVVELGGLHVIGTERHES 660
Query: 548 RRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDA 607
RRIDNQLRGRAGRQGDPGST+F +SL+D + + F D L++ +EDMPIE
Sbjct: 661 RRIDNQLRGRAGRQGDPGSTKFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESQM 718
Query: 608 IVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYM 667
+ R L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 719 LTRSLEGAQKKVETFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYA 776
Query: 668 QAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPEL 727
+ +DEI VD +P ELP
Sbjct: 777 EKTMDEI----VDAYVNP-------------------------------------ELP-- 793
Query: 728 NSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD 787
P+ PNL ++ LK D+T T + ++ +L +
Sbjct: 794 ----------PEEWDIPNLVGKVKEFVYLLK--------DVTPQDMEDMTVSEMKIFLHE 835
Query: 788 ILIASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGH 844
+ +Y ++E D + M+E ER +++ +D WR+HL M+ L ++ +R +G
Sbjct: 836 EVRKAY--DIKEYEVDQIRPGLMREAERFFILQQIDTLWREHLQTMDALRESIGLRGYGQ 893
Query: 845 RNPLEEYKIDGCRFFISMLSATRRLTVESL 874
++PL EYK +G F+ M+ RR V SL
Sbjct: 894 QDPLIEYKQEGYEMFLEMMIDIRRNVVYSL 923
>gi|257058984|ref|YP_003136872.1| preprotein translocase subunit SecA [Cyanothece sp. PCC 8802]
gi|256589150|gb|ACV00037.1| preprotein translocase, SecA subunit [Cyanothece sp. PCC 8802]
Length = 935
Score = 627 bits (1617), Expect = e-176, Method: Compositional matrix adjust.
Identities = 381/930 (40%), Positives = 519/930 (55%), Gaps = 146/930 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQGGMNPEERKKNYGCDITYTTNSELGFDYLRDNMATAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R PF++ I+DEVDS+LIDE R PL+ISG+ + +Y AA +A L++
Sbjct: 204 R---PFNYCIIDEVDSILIDEARTPLIISGQVERPTEKYLQAAAIAAQLLKQESEDDPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T+ G AE L DL+D+++PWA ++ NA+KAKE + +DV Y++RN
Sbjct: 261 YEVDEKARNVLMTDAGFEKAEQLLNVQDLYDQDNPWAHYIFNAIKAKELFTKDVNYMIRN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 NEIVIVDEFTGRVLPGRRWSDGLHQAIEAKEGVEIQRETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DLP + T KW+ EVE + GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRISRRYDLPDVVYKTEDAKWQAVAGEVEELHHQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE LS LL+Q+ I HN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSEVLSKLLQQKKIHHNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDD---KTSSPKVLSEIKLGSSSLA 448
RGTDIILGGN +A+ I + L+ + + E DD S G+S
Sbjct: 501 RGTDIILGGNADYMARLKIREYLM----PQIVMPEDDDLMAGVSGNGGRRPQGFGTS--- 553
Query: 449 LLAKAALLAKYVGKAEGKSWT-----------YQEAKSFFSESVEMS------QSMNLKE 491
K +GK+W+ QE + E+V+ + QS+ E
Sbjct: 554 -------------KKKGKNWSPSDADIFPTKMSQETEEILKEAVKFAVEQYGQQSLTELE 600
Query: 492 LQKLIDKQSAMYPLGPTVA----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHES 547
++ I S P V + Y ++ K E E EV LGGLHVIGT HES
Sbjct: 601 AEEKIAIASENAPTDDPVVEKLRVVYKAIRKTYETVTDQEHDEVVELGGLHVIGTERHES 660
Query: 548 RRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDA 607
RRIDNQLRGRAGRQGDPGST+F +SL+D + + F D L++ +EDMPIE
Sbjct: 661 RRIDNQLRGRAGRQGDPGSTKFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESQM 718
Query: 608 IVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYM 667
+ R L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 719 LTRSLEGAQKKVETFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYA 776
Query: 668 QAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPEL 727
+ +DEI VD +P ELP
Sbjct: 777 EKTMDEI----VDAYVNP-------------------------------------ELP-- 793
Query: 728 NSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD 787
P+ PNL ++ LK D+T T + ++ +L +
Sbjct: 794 ----------PEEWDIPNLVGKVKEFVYLLK--------DVTPQDMEDMTVSEMKIFLHE 835
Query: 788 ILIASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGH 844
+ +Y ++E D + M+E ER +++ +D WR+HL M+ L ++ +R +G
Sbjct: 836 EVRKAY--DIKEYEVDQIRPGLMREAERFFILQQIDTLWREHLQTMDALRESIGLRGYGQ 893
Query: 845 RNPLEEYKIDGCRFFISMLSATRRLTVESL 874
++PL EYK +G F+ M+ RR V SL
Sbjct: 894 QDPLIEYKQEGYEMFLEMMIDIRRNVVYSL 923
>gi|434389366|ref|YP_007099977.1| preprotein translocase, SecA subunit [Chamaesiphon minutus PCC
6605]
gi|428020356|gb|AFY96450.1| preprotein translocase, SecA subunit [Chamaesiphon minutus PCC
6605]
Length = 931
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 372/928 (40%), Positives = 514/928 (55%), Gaps = 140/928 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG VLH+G IAEMKT V+TVNDYLA+RDA
Sbjct: 84 LRHFDVQMLGGMVLHEGQIAEMKTGEGKTLVATLPAYLNALTGKGVHVITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM P ER+ NY CD+TY NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQSGMNPPERKKNYSCDVTYATNSELGFDYLRDNMAEAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F ++DEVDS+LIDE R PL+ISG+ + +Y AA +A L + HY V+ K
Sbjct: 204 R---PFNFCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAADIARGLNKEKHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V L++EG A AE L DL+DE DPWA +V NA+KAKE + RD YI+ N + I+
Sbjct: 261 ARNVLLSDEGFAEAERLLGVTDLYDEADPWAHYVFNAIKAKELFIRDTHYIIINDEVTIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQAVEAKE +KIQ ++ +A ITYQ+ F LYPKL GMTGTAKT
Sbjct: 321 DEFTGRVLSGRRWSDGLHQAVEAKEKVKIQNETQTLATITYQNFFLLYPKLGGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K +++ V +PTN + R D P + T KW QE M GRPVLVG+
Sbjct: 381 EEVELEKTYKIQVTVMPTNRKSQRYDYPDVVYKTEEAKWRAVAQECAEMHATGRPVLVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TS+E SE LS LL Q IPH +LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 441 TSIEKSEILSQLLHQLEIPHQLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + L+ P++++ G+ S A +A AA +
Sbjct: 501 LGGNSDYMARLKLREYLM------------------PRIVAPEDDGNFSPATVA-AAQQS 541
Query: 458 KYVGKAEG---KSWTYQEAKSFFSESVEMSQSMNLKE-------------LQKLIDKQSA 501
K G+ G K+ T++ + F + LK+ L +L +++
Sbjct: 542 KASGQGFGGGKKAKTWKASPDIFPTEISKETEALLKDAVNFAVGHYGERSLSELDAEETI 601
Query: 502 MYPL--GPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDN 552
PT + Y ++ K+ + S E EV GGLHVIGT HESRR+DN
Sbjct: 602 AVACEKAPTEIEAVQKLRNAYKAIRKEYDAFTSVEHEEVLDNGGLHVIGTERHESRRVDN 661
Query: 553 QLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQL 612
QLRGRAGRQGD GST+F +SL+D + Q F D L+ +EDMPIE + L
Sbjct: 662 QLRGRAGRQGDKGSTKFFLSLKDPLMQIFGGDR--VSGLMDAFRVEEDMPIESKMLTNSL 719
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y
Sbjct: 720 EGAQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVVKY------ 771
Query: 673 EIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDI 732
A + +DD+ +
Sbjct: 772 ----------------------------AERTMDDI-----------------------V 780
Query: 733 NNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIAS 792
N + PDLP G+ K+ R DDLT + + ++ ++ + + +
Sbjct: 781 NAYIDPDLPPEEWNLEGLVSKA----REFVNLFDDLTPTQIDDMSYDEIKIFMREEVRRA 836
Query: 793 YLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLE 849
Y ++ES+ D V ++ ER +++ +D WR+HL +M+ L +V +R +G ++PL
Sbjct: 837 Y--DIKESQIDRVQAGLTRQAERFFILQQIDTLWREHLQSMDALRESVGLRGYGQKDPLI 894
Query: 850 EYKIDGCRFFISMLSATRRLTVESLVQY 877
EYK +G F+ M++ RR V S+ Q+
Sbjct: 895 EYKQEGYEMFLEMMTDIRRNVVYSMFQF 922
>gi|384253008|gb|EIE26483.1| protein translocase subunit secA, chloroplastic [Coccomyxa
subellipsoidea C-169]
Length = 932
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 370/912 (40%), Positives = 517/912 (56%), Gaps = 128/912 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH G IAEM+T VVTVNDYLA+RD+
Sbjct: 81 LRPFDVQLIGGMILHVGQIAEMRTGEGKTLVAVLPAFLNALSGKGVQVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +VHRFLGL VGL+Q+G+ EER++ YR D+TY NSELGFDYLRDNLA ++E LV+
Sbjct: 141 EWVGQVHRFLGLKVGLVQQGLNEEERKAAYRADVTYVTNSELGFDYLRDNLAQSAEDLVL 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F I+DEVDS+LIDE R PL+ISG A K +Y AA++AE + + LHYTV+ K
Sbjct: 201 R---DFNFCIIDEVDSILIDEARTPLIISGPAEKSSYKYQQAAQLAEAMERNLHYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
S+ +TEEG AE L+ DL+D + WA +++NALKAKE +DV YIVR + +I+
Sbjct: 258 QKSILITEEGYEAAEDVLQLTDLYDPREQWASYLINALKAKELQAKDVNYIVRGQEVIIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRW +G+HQAVEAKEG++IQ +++ +A I+YQ+ F+ YPKL+GMTGTA T
Sbjct: 318 DEFTGRTMPGRRWGDGLHQAVEAKEGVEIQNETITLASISYQNFFRSYPKLAGMTGTAVT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++ + V EVP N P R D P F T GKW A E++ + GRPVLVG+
Sbjct: 378 EAAEFSNIYSLEVTEVPPNRPISRTDNPDVVFRTEAGKWAAAVTEIKLYHKQGRPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE L+ +LKQ+GIP+ +LNA+P+ RE+E VAQ+GR+ A+TISTNMAGRGTDI+
Sbjct: 438 TSVERSEALAAMLKQEGIPYELLNAKPENVERESEIVAQSGRRGAVTISTNMAGRGTDIL 497
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP+ +A+ L REAL P+V+S+++ + + +
Sbjct: 498 LGGNPEYMAR---------LKLREAL---------MPEVVSQVEALERAASSSNNGNGSS 539
Query: 458 KYVGKAEGKSWTYQ----------EAKSFFSESVEMSQSM----NLKELQK------LID 497
A KSW EAK E+V ++ +L EL+ +
Sbjct: 540 NGSRPARIKSWAASPKLFPCDVSLEAKDLMKEAVSAAKGAWGERHLPELEAEDRLAIACE 599
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
+ P+ + + + D + NE +EV +LGGLHV+GT HESRRIDNQLRGR
Sbjct: 600 RAPTSDPVIAKLRAAFQRLEADYKAVTDNEKAEVVQLGGLHVVGTERHESRRIDNQLRGR 659
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
+GRQGDPGSTRF +SL+D +F+ F D + + +I ED+PIE + L Q
Sbjct: 660 SGRQGDPGSTRFFLSLEDNLFRVFGGDRIKGLMSVFQI---EDLPIESKMLTDALTEAQR 716
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVY-DLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E Y+F IR+ L E+D+VL QR VY + R+ +L+ + S + +Y + VD+I+
Sbjct: 717 KVESYFFDIRRQLWEYDQVLNTQRDKVYLERRRGLLS---KDLSPLLLEYAERTVDDILE 773
Query: 677 GNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
NV+P + W L+ A+A K+ + LL+ I PEL + + Y
Sbjct: 774 ANVNPTLPSKEWPLE-------ALAAKMKQYCY-------LLEDI--TPELLTAESGGDY 817
Query: 737 FPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNV 796
L+ +L R R T +K + S L
Sbjct: 818 ------------------EELRAYL-----------RRRGTQAYQQKVADIEAVESGL-- 846
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
++E +R L+ D W++HL M L AV +R + R PL EYK++G
Sbjct: 847 ----------LQEAQRFFLLTQTDNMWKEHLQAMKFLQQAVGLRGYAQREPLAEYKLEGY 896
Query: 857 RFFISMLSATRR 868
F+ M++ RR
Sbjct: 897 GLFLEMMAKIRR 908
>gi|126656214|ref|ZP_01727598.1| translocase [Cyanothece sp. CCY0110]
gi|126622494|gb|EAZ93200.1| translocase [Cyanothece sp. CCY0110]
Length = 933
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 370/909 (40%), Positives = 513/909 (56%), Gaps = 106/909 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLMGGMVLHQGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ GM PEER+ NY CD+TYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSGMNPEERKKNYACDVTYTTNSELGFDYLRDNMATAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL-VQGLH----- 151
R P +F I+DEVDS+LIDE R PL+ISG+ + +Y AA++A+ L +Q
Sbjct: 204 RPP---NFCIIDEVDSILIDEARTPLIISGQVERPTEKYVKAAEIAKKLEIQESEEDLKD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T++G AE L DL+D+ +PWA ++ NA+KAKE + +DV YIV+N
Sbjct: 261 YEVDEKARNVLMTDQGFEKAEQLLGVGDLYDQENPWAHYIFNAIKAKELFTKDVNYIVKN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG+ IQ ++ +A ITYQ+ F LY KLSGM
Sbjct: 321 KEVVIVDEFTGRVLAGRRWSDGLHQAIEAKEGVPIQRETQTLATITYQNFFLLYNKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN P+ R D P + T KW+ EVE M + GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRPSQRYDFPDVVYKTEPAKWKAVAAEVEDMHQQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE +S LL+Q IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSEVISALLQQSNIPHNILNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLL-LLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I L+ ++ E N+ + + S
Sbjct: 501 RGTDIILGGNSDYMARLKIRQYLMPQIVMPEDDNLMTGGMGGNNRRPQGFGQDSKKKKWQ 560
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMY--PLGPT 508
A + + E ++ K E + S S E + I ++A P+
Sbjct: 561 PSADIFPTELS-PETQNMIKDAVKFAVDEYGQQSLSELEAEEKIAIASENAPTEDPVIEK 619
Query: 509 VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTR 568
+ Y ++ K+ + E EV LGGLHVI T HESRRIDNQLRGRAGRQGDPGST+
Sbjct: 620 LRQVYKAIRKEYDAFTDAEHEEVIELGGLHVIATERHESRRIDNQLRGRAGRQGDPGSTK 679
Query: 569 FMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRK 628
F +SL+D + + F D L++ +EDMPIE + R L G Q E +Y+ RK
Sbjct: 680 FFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESKMLTRSLEGAQKKVETFYYDTRK 737
Query: 629 SLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
+ E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +DEI VD +P
Sbjct: 738 QVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYAEKTMDEI----VDAYVNP--- 788
Query: 689 SLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFR 748
ELP D+ N
Sbjct: 789 ----------------------------------ELPP-EEWDVENLV------------ 801
Query: 749 GIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV--- 805
S +K ++ + +D+T T ++ +L + + +Y ++E + D V
Sbjct: 802 ------SKVKEFVYLL-EDITAKDMEDMTVAEMKIFLHEEVRKAY--DIKEDQVDKVRPG 852
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E ER +++ +D WR+HL +M+ L ++ +R +G ++PL EYK +G F+ M+
Sbjct: 853 LMREAERFFILQQIDTLWREHLQSMDALRESIGLRGYGQKDPLIEYKQEGYEMFLEMMID 912
Query: 866 TRRLTVESL 874
RR V SL
Sbjct: 913 IRRNVVYSL 921
>gi|427703481|ref|YP_007046703.1| Preprotein translocase subunit SecA [Cyanobium gracile PCC 6307]
gi|427346649|gb|AFY29362.1| preprotein translocase, SecA subunit [Cyanobium gracile PCC 6307]
Length = 944
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 373/927 (40%), Positives = 521/927 (56%), Gaps = 126/927 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHNGQIAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+A++ ++V
Sbjct: 144 EWMGQIHRFLGLSVGLIQQDMSPPERRRNYACDITYATNSELGFDYLRDNMASDIAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------ELLVQGL 150
R F + I+DEVDS+L+DE R PL+ISG+ + +Y AA++A E+ G+
Sbjct: 204 R---EFEYCIIDEVDSILVDEARTPLIISGQIERPQEKYMQAARIAAELERAAEMGKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K +V LT+EG AE L DL++ DPWA F+ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRNVTLTDEGYQKAEQLLGVQDLFNPQDPWAHFINNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+ A+I++E TGRV RRWS+G+HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDSDAVIVDEFTGRVMPGRRWSDGLHQAIEAKESLPIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN R D P Q + T KW+ E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLEVAVVPTNRVRSRSDWPDQVYKTETAKWQAVAAETAQV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL++Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRSGRPVLVGTTSVEKSELLSTLLQEQAIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALN----VEVDDKTSSPKVLSEIKL 442
TNMAGRGTDIILGGN +A+ + + LL L R V + T +P
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRPEEGHRPPVPLQRSTEAPAGFG---- 556
Query: 443 GSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM-----SQSMNLKELQKLID 497
++A ++ A A+ +G + K+ S E+ +++ + EL+ I
Sbjct: 557 --GAVAPSSRPASEARAIGNLYPCRLSEDTEKALVGFSRELVAAWGDRTLTVLELEDRIA 614
Query: 498 KQSAMYPLG-PTVA-LTYL--SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQ 553
+ + P P + L L V + +V E ++V+ GGLHVIGT HESRR+DNQ
Sbjct: 615 QAAEKAPTDDPQIQRLRELIAQVRAEYDVVVKQEEAQVRTAGGLHVIGTERHESRRVDNQ 674
Query: 554 LRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLL 613
LRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L
Sbjct: 675 LRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLE 732
Query: 614 GLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDE 673
G Q E YY+ +RK + E+DEV+ QRK VY R+ +L G
Sbjct: 733 GAQKKVETYYYDMRKQVFEYDEVMNNQRKAVYTERRRVLEGR------------------ 774
Query: 674 IIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDIN 733
+L ++ I + +DD+ +
Sbjct: 775 ------------------ELKQQVIGYGERTIDDI-----------------------VE 793
Query: 734 NFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASY 793
+ PDLP P + + R +K ++ + +D L+ + + L+ +L + + +Y
Sbjct: 794 AYVNPDLP--PEEW-DLTRLVEKVKEFIYLLAD-LSPDQVSGLSMEELKAFLQEQMRNAY 849
Query: 794 LNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
++E + + + M+E ER +++ +D WR+HL M L +V +R +G ++PL E
Sbjct: 850 --DIKEGQIEQMRPGLMREAERFFILQQIDTLWREHLQAMEALRESVGLRGYGQKDPLIE 907
Query: 851 YKIDGCRFFISMLSATRRLTVESLVQY 877
YK +G F+ M++ RR + S+ +
Sbjct: 908 YKNEGYDMFLEMMTQMRRNVIYSMFMF 934
>gi|119486318|ref|ZP_01620377.1| translocase [Lyngbya sp. PCC 8106]
gi|119456531|gb|EAW37661.1| translocase [Lyngbya sp. PCC 8106]
Length = 931
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 372/927 (40%), Positives = 511/927 (55%), Gaps = 129/927 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMILHKGEIAEMKTGEGKTLVATLPAYLNALSGHGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRF+GLSVGLIQ+GM PEER+ NY CDITY NSE+GFDYLRDN+A + + +V
Sbjct: 144 EWMGQVHRFMGLSVGLIQQGMSPEERQRNYGCDITYATNSEVGFDYLRDNMATSMDDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDSVLIDE R PL+ISG+ + +Y AA+VA+ L Y V+ K
Sbjct: 204 R---PFNFCIIDEVDSVLIDEARTPLIISGQVERPSQKYIRAAQVAKTLQPEEDYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V L +EG A AE L DL+D NDPWA FV NA+KAKE + +DV YIVR + +I+
Sbjct: 261 ARNVLLGDEGFAKAEELLGVRDLYDPNDPWAHFVFNAVKAKELFTKDVNYIVREDEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 321 DEFTGRVMPGRRWSDGLHQAIEAKESVDIQPETQTLATITYQNFFLLYPKLSGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V VPTN RVDL + T GKW +E M +GRPVLVG+
Sbjct: 381 EEVEFEKIYNLQVTIVPTNRTTGRVDLSDVVYKTELGKWSAIAEECAQMNEVGRPVLVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL ++ IP+N+LNA+P+ RE+E +AQAGRK A+TISTNMAGRGTDII
Sbjct: 441 TSVEKSELLSRLLAERQIPYNLLNAKPENVERESEIIAQAGRKGAVTISTNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + + P+ E+ + +
Sbjct: 501 LGGNADFMARLKMREYFMPRIVK-------------PEDERELAMKRAFSGGGGSGGGQG 547
Query: 458 KYVGKAEGKSWTY----------QEAKSFFSESVEMSQSM----NLKEL---QKLI---D 497
+GKSW +E + E+VE + S +L EL KL +
Sbjct: 548 FGGDPKKGKSWKVSPQIFPTQLSRETEQQLKETVEFAVSQYGERSLSELLAEDKLAIASE 607
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K P+ + Y +++ + E E EV +LGGLHVIGT HESRRIDNQLRGR
Sbjct: 608 KAPTTDPVIQRLREVYKTIVAEYENFTEREHDEVVQLGGLHVIGTERHESRRIDNQLRGR 667
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SLQD + + F D L+ DEDMPIE + R L Q
Sbjct: 668 AGRQGDPGSTRFFLSLQDNLLRIFGGDR--VAGLMDAFHVDEDMPIESRLLTRSLENAQK 725
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ IRK Q+F+Y DE++
Sbjct: 726 KVETYYYDIRK---------------------------------QVFEY-----DEVMNN 747
Query: 678 NVDPLKHPRYWSLD--KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNF 735
+ R L+ L ++ I + ++D+ ++ +
Sbjct: 748 QRRAIYAERRRVLEGQDLKEQVIKYGEQTMNDI-----------------------VDAY 784
Query: 736 YFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASY-L 794
PDLP + S +K ++ + SD L + + + ++ +L + L +Y +
Sbjct: 785 INPDLPSEEWDLENV---VSKVKEFVYLLSD-LNADQLIDLSVDEIKTFLHEQLRNAYDI 840
Query: 795 NVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKID 854
Q ++ M+E ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +
Sbjct: 841 KEAQVNQIKPGLMREAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKRE 900
Query: 855 GCRFFISMLSATRRLTVESLVQYWSSP 881
G F+ M++ RR + S+ Q+ P
Sbjct: 901 GYEQFLDMMTDIRRNVIYSMFQFQPQP 927
>gi|123967061|ref|YP_001012142.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9515]
gi|166918847|sp|A2BZ24.1|SECA_PROM5 RecName: Full=Protein translocase subunit SecA
gi|123201427|gb|ABM73035.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
MIT 9515]
Length = 943
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 377/926 (40%), Positives = 524/926 (56%), Gaps = 125/926 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMSPAERKKNYACDITYATNSELGFDYLRDNMATEIEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------ELLVQGL 150
R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A EL G+
Sbjct: 204 R---KFNYCVIDEVDSILIDEARTPLIISGQIERPQEKYQKAAELALSLIKAKELSKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E +L+ NDL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDQGFAKCEESLKVNDLYDPQDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++ +A+I++E TGRV RRWS+G HQA+EAKEGLKIQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIIKKDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLKIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ VPTN R D Q F T GKW+ E +
Sbjct: 381 GLAGMTGTAKTEEVEFEKTYKLESTVVPTNQVRKRQDWADQVFKTEIGKWKAVANETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRNGRPVLVGTTSVEKSELLSSLLFEQQIPHNLLNAKPENVEREAEIVAQAGRSGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ +++ L+ LL V+ D++ P + + + +
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLKETLMPLL------VKPDNEHKPP--IPQQRSSKAG 552
Query: 447 LALLAKAALLAKYVGKAEGKSW--------TYQEAKSFFSESVEM--SQSMNLKELQKLI 496
+K+ ++ K+ G S T ++ +E V+ +++ + EL I
Sbjct: 553 GGFASKSESISNKNSKSSGASLFPCQLGEDTTRKLSLLSNELVKSWGERTLTILELDDRI 612
Query: 497 DKQSAMYPLGPTVALTYLSVLKDC----EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDN 552
+ P + + L D E +E V++ GGLHVIGT HESRR+DN
Sbjct: 613 ATAAEKAPTEDKLIQSLRDALSDVKNEYEKVLVHEEENVRKAGGLHVIGTERHESRRVDN 672
Query: 553 QLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQL 612
QLRGRAGRQGD GSTRF +SL+D + + F D +L++ DEDMPIE + R L
Sbjct: 673 QLRGRAGRQGDLGSTRFFLSLEDNLLRIFGGDR--VANLMNAFRVDEDMPIESGMLTRSL 730
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
Q E YY+ IRK + E+DEV+ QRK VY+ R +L G++ +Q+ Y
Sbjct: 731 ESAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYNERLRVLKGSD--LKKQVLGY------ 782
Query: 673 EIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDI 732
GD +++EE+ +
Sbjct: 783 -----------------------------------------GD---RTMEEI-------V 791
Query: 733 NNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIAS 792
+ PDLP P + I + S +K ++ + ++L + L+ YL + L +
Sbjct: 792 EAYINPDLP--PEEW-DIEQLISKVKEFIYLL-NNLKSTDVSVLSVEELKNYLQEQLRIA 847
Query: 793 Y-LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEY 851
Y L Q ++ M+E ER +++ +D WR+HL +M+ L +V +R +G ++PL EY
Sbjct: 848 YDLKEAQIEQFRPGLMREAERFFILQQIDNLWREHLQSMDSLRESVGLRGYGQKDPLIEY 907
Query: 852 KIDGCRFFISMLSATRRLTVESLVQY 877
K +G F+ M++ RR + S+ +
Sbjct: 908 KNEGYDMFLEMMTNMRRNVIYSMFMF 933
>gi|75908343|ref|YP_322639.1| preprotein translocase subunit SecA [Anabaena variabilis ATCC
29413]
gi|123609644|sp|Q3MB92.1|SECA_ANAVT RecName: Full=Protein translocase subunit SecA
gi|75702068|gb|ABA21744.1| protein translocase subunit secA [Anabaena variabilis ATCC 29413]
Length = 930
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 347/755 (45%), Positives = 461/755 (61%), Gaps = 89/755 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQMLGGVILHSGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSSMTPSERQKNYECDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+L+DE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILVDEARTPLIISGQVERPTEKYVQAAEIALTLQKDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAQAEELLGVTDLFDPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVDIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF +++++ V +PTN R DL F GKW+ +E M LGRPVLVG+
Sbjct: 374 EEAEFERIYKLEVTIIPTNRIRRREDLSDLVFKKEIGKWQAIARECAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL++QGIPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSQLLREQGIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + P++ ++ + + +AA L
Sbjct: 494 LGGNSEYMARLKLREYFM------------------PRI---VRPDDEDVFGVQRAAGLP 532
Query: 458 KYVGKAEG-------KSWTY----------QEAKSFFSESVEMS----QSMNLKELQKLI 496
G +G K+W +EA+ E+V+ + +L EL+
Sbjct: 533 TGHGAGQGFVPGKKVKTWKASPEIFPTQLSKEAEQLLKEAVDFAVREYGDRSLPELEAE- 591
Query: 497 DKQSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRR 549
DK + PT + Y + ++ E S E EV GGLHVIGT HESRR
Sbjct: 592 DKVAVAAEKAPTNDPVIQKLRDAYKRIKQEYEEFTSTEHDEVVSRGGLHVIGTERHESRR 651
Query: 550 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIV 609
IDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ ++DMPIE +
Sbjct: 652 IDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMEAFNVEDDMPIESGMLT 709
Query: 610 RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQA 669
R L G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y +
Sbjct: 710 RSLEGAQRKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYAEK 767
Query: 670 VVDEII--FGNVD-PLKHPRYWSLDKL---LKEFI 698
+DEI+ + NVD P + W LDKL +KEF+
Sbjct: 768 TMDEIVDYYINVDLPSEE---WELDKLVDKVKEFV 799
>gi|428310727|ref|YP_007121704.1| protein translocase subunit secA [Microcoleus sp. PCC 7113]
gi|428252339|gb|AFZ18298.1| protein translocase subunit secA [Microcoleus sp. PCC 7113]
Length = 930
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 344/747 (46%), Positives = 456/747 (61%), Gaps = 74/747 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIVLHKGQIAEMKTGEGKTLVSTLPAYLNALSGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHR+LGLSVGLIQ GM P ER+ NY CDITY NSELGFDYLRDN+A +V
Sbjct: 144 EWMGQVHRYLGLSVGLIQSGMGPAERQRNYACDITYATNSELGFDYLRDNMATVMSDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDSVLIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 204 R---PFNYCVIDEVDSVLIDEARTPLIISGQVERPTEKYLKAAQIARALQKEEHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE LE DL++ DPWA ++ NA+KAKE + DV YIVRNG+ +I+
Sbjct: 261 ARNVLLTDEGFAEAEKLLEVEDLYNPEDPWAHYIFNAIKAKELFLADVNYIVRNGEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 321 DEFTGRVLSGRRWSDGLHQAIEAKENVDIQNETQTLATITYQNFFLLYPKLAGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN P+ R DL + T KW+ +E M GRPVLVG+
Sbjct: 381 EESEFEKIYNLQVTIIPTNRPSGRHDLSDVVYKTEPAKWQAIAEECAQMHEEGRPVLVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLKQ+ +PH +LNARP+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 441 TSVEKSELLSGLLKQRAVPHELLNARPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + PK++ + + + + A+ A
Sbjct: 501 LGGNSDYMARLKLREYFM------------------PKIVMPEQEDALTPVSVPGASERA 542
Query: 458 KYVGKAEG---KSW--------------TYQEAKSFFSESVEMSQSMNLKELQK------ 494
+ G A G K+W T Q K + +V+ +L EL+
Sbjct: 543 RPQGFAPGKKVKTWKASPQIFPTELSKETEQLLKDAVNFAVKRYGERSLPELEADEKIAV 602
Query: 495 LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
+K P+ + Y ++ K+ E S E EV +LGGLHVIGT HESRRIDNQL
Sbjct: 603 AAEKAPTDDPVIEKLREVYKAIRKEYEHLTSREHDEVVKLGGLHVIGTERHESRRIDNQL 662
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGDPGST+F +SL+D + + F D L++ +EDMPIE + R L G
Sbjct: 663 RGRAGRQGDPGSTKFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESKMLTRSLEG 720
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +D+I
Sbjct: 721 AQKKVETFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVIQYAERTMDDI 778
Query: 675 IFGNVDPLKHPRYWSLDKL---LKEFI 698
+ V+P W LD+L +KEF+
Sbjct: 779 VEAYVNPDLPQEEWQLDQLVSKVKEFV 805
>gi|425466534|ref|ZP_18845832.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9809]
gi|389830919|emb|CCI26750.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9809]
Length = 938
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 372/927 (40%), Positives = 515/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE LE DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLEVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRNIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQY---- 774
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
A K +D++
Sbjct: 775 ------------------------------AEKTMDEI---------------------- 782
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
+ + P+LP + KS LA D+T + N ++ +L + +
Sbjct: 783 -VMAYVNPELPAEEWDLEKLISKSQEFVYLLA----DITAKDVEEMSVNDIKMFLHEEVR 837
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
+Y ++E + D + M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 838 KAY--EIKERQVDSIRAGLMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|33241250|ref|NP_876192.1| preprotein translocase subunit SecA [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|81712760|sp|Q7V9M9.1|SECA_PROMA RecName: Full=Protein translocase subunit SecA
gi|33238780|gb|AAQ00845.1| Preprotein translocase subunit SecA [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 946
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 387/944 (40%), Positives = 511/944 (54%), Gaps = 138/944 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT +VTVNDYLA+RDA
Sbjct: 83 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSFLNALTGRGVHIVTVNDYLARRDA 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 143 EWMGQVHRFLGLSVGLIQQDMTPIERRKNYECDITYATNSELGFDYLRDNMANDINEIVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKV-------AELLVQGL 150
R F F I+DEVDS+LIDE R PL+ISG+ + +Y AA+V AE+ G+
Sbjct: 203 R---DFQFCIIDEVDSILIDEARTPLIISGQIERPQEKYQKAAEVVSTLQRAAEMGKDGI 259
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K + LT+EG A +E L+ DL+D DPWA ++ NALKAKE + +DV
Sbjct: 260 DPEGDYEVDEKQRTCTLTDEGFAKSEELLKVKDLFDPKDPWAHYITNALKAKELFVKDVN 319
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVRN A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 320 YIVRNEDAVIVDEFTGRVMPGRRWSDGQHQAIEAKEELPIQPETQTLASITYQNFFLLYP 379
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ +PTN P R D Q F T KW E +
Sbjct: 380 RLAGMTGTAKTEEVEFEKTYKLETTVIPTNRPRSRADWVDQVFKTESAKWRAVANETVEI 439
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q +PHN+LNA+P+ REAE +AQAGR A+TI+
Sbjct: 440 HKKGRPVLVGTTSVEKSEVLSALLGEQDVPHNLLNAKPENVEREAEIIAQAGRAGAVTIA 499
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + L L V+ +D P L K S
Sbjct: 500 TNMAGRGTDIILGGNSDYMARLKVREVLFPKL------VKPEDSHKPPVPLQRRKDSSVG 553
Query: 447 LALLAKAALLAK--YVGKAEGKSWTYQEAKSFFSESVEMSQSMNL-KELQ-------KLI 496
+ K + + Y + +E V + L KE +L
Sbjct: 554 FGKEENNSKDKKVNHSNDVRAQENLYPCVLTDSTEQVLLDLEHQLIKEWGDRVLSPIELE 613
Query: 497 DKQSAMYPLGPT--------------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGT 542
D+ S PT V Y V+K EVH V+ GGLHVIGT
Sbjct: 614 DRISTAAEKAPTQDPLVQSLREAISLVKSEYDVVVKQEEVH-------VREAGGLHVIGT 666
Query: 543 SLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMP 602
HESRR+DNQLRGRAGRQGD GSTRF +SL D + + F D A L++ DEDMP
Sbjct: 667 ERHESRRVDNQLRGRAGRQGDLGSTRFFLSLGDNLLRIFGGDRVAA--LMNAFRVDEDMP 724
Query: 603 IEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQ 662
IE + R L Q E YYF IRK + E+DEV+ QR+ VY R +L G + +Q
Sbjct: 725 IESGMLTRSLESAQKKVETYYFDIRKQVFEYDEVMNNQRRAVYSERHRVLEG--DELKKQ 782
Query: 663 IFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIE 722
+ Y + + EI++ V+P W LK+ + GK+ + F + D K IE
Sbjct: 783 VIGYGERTMQEIVYAYVNPELPSEEWD----LKQLV---GKVKE--FVYLLDDLKPKDIE 833
Query: 723 ELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLR 782
LN ++ F L R + LK
Sbjct: 834 A---LNIDELQAFLQEQL-----------RNAYDLKE----------------------- 856
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
+ ++ESR M+E ER +++ +D WR+HL +M+ L +V +R +
Sbjct: 857 ------------SQIEESRPG--LMREAERFFILQQIDTLWREHLQSMDALRESVGLRGY 902
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQE 886
G ++PL EYK +G F+ M++ RR + S+ + +P +E
Sbjct: 903 GQKDPLIEYKNEGYDMFLEMMTNMRRNVIYSMFMFQPAPPSDKE 946
>gi|224130830|ref|XP_002320935.1| predicted protein [Populus trichocarpa]
gi|222861708|gb|EEE99250.1| predicted protein [Populus trichocarpa]
Length = 963
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 374/910 (41%), Positives = 512/910 (56%), Gaps = 116/910 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T +VTVNDYLA+RD
Sbjct: 88 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHIVTVNDYLARRDC 147
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLA---ANSEQ 94
EW+ +V RFLGL VGLIQ+ M E+RR NY CDITY NSELGFDYLRDNLA E+
Sbjct: 148 EWVGQVPRFLGLKVGLIQQNMTSEQRRENYMCDITYVTNSELGFDYLRDNLAMEIQTVEE 207
Query: 95 LVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTV 154
LV+R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV
Sbjct: 208 LVLR---DFNYCVIDEVDSILIDEARTPLIISGPAEKPSDRYYKAAKIATAFERDIHYTV 264
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKA 214
+ K +V LTE+G E L+ DL+D + WA +++NA+KAKE + RDV YI+R +
Sbjct: 265 DEKQKTVLLTEQGYGDTEEILDVKDLYDPREQWASYILNAIKAKELFLRDVNYIIRGKEV 324
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
LI++E TGRV + RRWS+G+HQAVEAKEGL IQ +++ +A I+YQ+ F +PKL GMTGT
Sbjct: 325 LIVDEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETLTLASISYQNFFLQFPKLCGMTGT 384
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE EF ++++ V VPTN P +R D F GKW E+ M + GRPVL
Sbjct: 385 AATESTEFESIYKLKVTIVPTNKPMMRKDESDVVFRATSGKWRAVVVEISRMNKTGRPVL 444
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+TSVE S+ L+ L + GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGT
Sbjct: 445 VGTTSVEQSDALAGQLLEAGIPHEVLNAKPENVEREAEIVAQSGRVGAVTIATNMAGRGT 504
Query: 395 DIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-------VLSEIKLGSSSL 447
DIILGGN + +A+ + + L+ + R A V V K S P+ L KL + +
Sbjct: 505 DIILGGNAEFMARLKLREMLMPRVVRPAEGVFVSVKKSLPQKTWKVNESLFPCKLSNENT 564
Query: 448 ALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGP 507
L +A LA VG +S T EA+ S S E + + ++I K +
Sbjct: 565 KLAEEAVQLA--VGSWGQRSLTELEAEERLSYSCEKGPAQD-----EVIAKLRS------ 611
Query: 508 TVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGST 567
+L ++K+ + + E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+
Sbjct: 612 ----AFLEIVKEFKEYTEEERKKVVSAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSS 667
Query: 568 RFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIR 627
RF +SL+D +F+ F D + + R ED+PIE + + + L Q E Y+F IR
Sbjct: 668 RFFLSLEDNLFRIFGGDR---IQGLMRAFRVEDLPIESNMLTKSLDEAQRKVENYFFDIR 724
Query: 628 KSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY 687
K L E+DEVL QR VY R+ L N I +Y + +D+I+ N+
Sbjct: 725 KQLFEYDEVLNSQRDRVYTERRRALESDN--LQSLIIEYAELTMDDILEANIGSDALVGS 782
Query: 688 WSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
W L+KL+ + + +L+DL PDL
Sbjct: 783 WDLEKLIAK-VQQYCYLLNDLT----------------------------PDL------- 806
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+R K SS +DL R R L+K DI+ + M
Sbjct: 807 --LRSKCSSY--------EDLQDYLRLRGREAYLQKR--DIV----------EKEAPSLM 844
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ R
Sbjct: 845 KEAERFLILSNIDRLWKEHLQAIKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIR 904
Query: 868 RLTVESLVQY 877
R + S+ Q+
Sbjct: 905 RNVIYSIYQF 914
>gi|37521405|ref|NP_924782.1| preprotein translocase subunit SecA [Gloeobacter violaceus PCC
7421]
gi|81710066|sp|Q7NJJ6.1|SECA_GLOVI RecName: Full=Protein translocase subunit SecA
gi|35212402|dbj|BAC89777.1| preprotein translocase subunit [Gloeobacter violaceus PCC 7421]
Length = 952
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 338/730 (46%), Positives = 454/730 (62%), Gaps = 47/730 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G IAEMKT +VTVNDYLA+RD+
Sbjct: 98 LRHYDVQLIGGLVLHEGQIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLARRDS 157
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER NY DITY NSELGFDYLRDN+A N+ +LV
Sbjct: 158 EWMGQVHRFLGLSVGLIQQSMTPSERAQNYAADITYGTNSELGFDYLRDNMATNAGELVQ 217
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ I+DEVDS+L+DE R PL+ISG +K +Y A +VA L + HY V+ K
Sbjct: 218 R---SFNYCIIDEVDSILVDEARTPLIISGMVAKPAEKYMRANEVATALERNTHYEVDEK 274
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L T DL+ DPWA FV NA+KAKE + +DVQYIVRN + +I+
Sbjct: 275 QRNVTLTDEGFIAAEQMLSTEDLFSPRDPWAHFVFNAVKAKELFNKDVQYIVRNDEVVIV 334
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWSEG+HQAVEAKE + IQ ++ +A ITYQ+ F LYPKL+GMTGTA T
Sbjct: 335 DEFTGRVMPGRRWSEGLHQAVEAKEMVTIQNETQTMASITYQNFFLLYPKLAGMTGTALT 394
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN +R D+ Q + T GKW+ E+ M + GRPVLVG+
Sbjct: 395 EEAEFGKIYSLEVTAIPTNRKVVRTDMSDQVYKTENGKWQSVAAEIAEMNKNGRPVLVGT 454
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK++GI HN+LNA+P+ RE+E VAQAGRK +TI+TNMAGRGTDI+
Sbjct: 455 TSVEKSEVLSALLKEKGIAHNLLNAKPENVERESEIVAQAGRKGGVTIATNMAGRGTDIL 514
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS----LALLAKA 453
LGGNP+ +A+ +++ L L +DD+ + ++ + G+S A K
Sbjct: 515 LGGNPEYMARLKLKEVLFPALV-------IDDEDAFSPMMRLLNNGNSRGTGFAATSKKK 567
Query: 454 ALLAKYVGKAEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSAMYPLGPTVAL 511
AL + E T Q+ K+ +V M + S ++++LI S P V
Sbjct: 568 ALPKAEIFPCELSESTKQQLKAAVDYAVAMLGADSQPALQVEELIAVASEKGPTDDPVIQ 627
Query: 512 ----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGST 567
Y ++ K+ +V E EV +LGGLHVIGT HE+RR+DNQLRGR+GRQGDPGST
Sbjct: 628 HLREIYRAIYKEYQVVTDREHDEVVKLGGLHVIGTERHEARRVDNQLRGRSGRQGDPGST 687
Query: 568 RFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIR 627
RF +SL D + + F + L+ +EDMPIE + + L Q E +Y+ R
Sbjct: 688 RFFLSLGDNLLRIFGGER--VAGLMEAFKVEEDMPIESGLLTKSLENAQRKVETFYYDQR 745
Query: 628 KSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY 687
K + E+DEV+ QRK +Y R+ L G + S + +Y+ VDEI+ +V+ + P
Sbjct: 746 KQVFEYDEVMNNQRKAIYAERRRALEG--QDLSAVVREYIDQTVDEIVRAHVNAERPPEE 803
Query: 688 WSLDKLLKEF 697
W L L+++
Sbjct: 804 WELPALIQDL 813
>gi|172036860|ref|YP_001803361.1| preprotein translocase subunit SecA [Cyanothece sp. ATCC 51142]
gi|354554664|ref|ZP_08973968.1| preprotein translocase, SecA subunit [Cyanothece sp. ATCC 51472]
gi|254767909|sp|B1X0K6.1|SECA_CYAA5 RecName: Full=Protein translocase subunit SecA
gi|171698314|gb|ACB51295.1| preprotein translocase subunit SecA [Cyanothece sp. ATCC 51142]
gi|353553473|gb|EHC22865.1| preprotein translocase, SecA subunit [Cyanothece sp. ATCC 51472]
Length = 933
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 366/917 (39%), Positives = 515/917 (56%), Gaps = 122/917 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLMGGMVLHQGQIAEMKTGEGKTLVATLPAYLNGLTSRGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ GM PEER+ NY CD+TYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSGMNPEERKKNYACDVTYTTNSELGFDYLRDNMATAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQG------LH 151
R P ++ I+DEVDS+LIDE R PL+ISG+ + +Y AA++A+ L +
Sbjct: 204 RPP---NYCIIDEVDSILIDEARTPLIISGQVERPTEKYIKAAEIAKQLEKQESEEDPKD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T++G AE L DL+D+ +PWA ++ NA+KAKE + +DV YIV+N
Sbjct: 261 YEVDEKARNVLMTDQGFEKAEQLLGVGDLYDQENPWAHYIFNAIKAKELFTKDVNYIVKN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG+ IQ ++ +A ITYQ+ F LY KLSGM
Sbjct: 321 KEVVIVDEFTGRVLAGRRWSDGLHQAIEAKEGVPIQRETQTLATITYQNFFLLYNKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN P+ R D P + T KW+ EVE M ++GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRPSQRYDFPDVVYKTEPAKWKAVAAEVEEMHKMGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE +S LL+Q IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSEVISALLQQSNIPHNILNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAK-KIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALL 450
RGTDIILGGN +A+ KI E + ++ E N+ S+ + S
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLMPQIVMPEDDNLMAGGMGSNNRRPQGFGQDSKKKKWQ 560
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMS------QSMNLKELQKLIDKQSAMYP 504
A + + E ++ E+V+ + QS++ E ++ I S P
Sbjct: 561 PSADIFPTDLSP---------ETQNMLKEAVKFAVDQYGQQSLSELEAEEKIAIASENAP 611
Query: 505 LGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
V Y + K + E EV GGLHVI T HESRRIDNQLRGRAGR
Sbjct: 612 TDDPVIEKLREVYKLIRKQYDAFTDKEHDEVVDKGGLHVIATERHESRRIDNQLRGRAGR 671
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGST+F +SL+D + + F D L++ +EDMPIE + R L G Q E
Sbjct: 672 QGDPGSTKFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESKMLTRSLEGAQKKVE 729
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
+Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 730 TFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQY-------------- 773
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
A K +D++ ++ + P+L
Sbjct: 774 --------------------AEKTMDEI-----------------------VDAYVNPEL 790
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQES 800
P P + + S +K ++ + +D+T T ++ +L + + +Y ++E
Sbjct: 791 P--PEEW-DVENLVSKVKEFVYLL-EDITAKDMEDMTVAEMKIFLHEEVRKAY--DIKED 844
Query: 801 RYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+ D V M+E ER +++ +D WR+HL +M+ L ++ +R +G ++PL EYK +G
Sbjct: 845 QVDKVRPGLMREAERFFILQQIDTLWREHLQSMDALRESIGLRGYGQKDPLIEYKQEGYE 904
Query: 858 FFISMLSATRRLTVESL 874
F+ M+ RR V SL
Sbjct: 905 MFLEMMIDIRRNVVYSL 921
>gi|17232343|ref|NP_488891.1| preprotein translocase subunit SecA [Nostoc sp. PCC 7120]
gi|81769686|sp|Q8YMS8.1|SECA_NOSS1 RecName: Full=Protein translocase subunit SecA
gi|17133988|dbj|BAB76550.1| preprotein translocase SecA subunit [Nostoc sp. PCC 7120]
Length = 930
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 347/755 (45%), Positives = 460/755 (60%), Gaps = 89/755 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQMLGGVILHSGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSSMTPSERQKNYECDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+L+DE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILVDEARTPLIISGQVERPTEKYVQAAEIALTLQKDEHYDVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAQAEELLGVTDLFDPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVDIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF +++++ V +PTN R DL F GKW+ +E M LGRPVLVG+
Sbjct: 374 EEAEFERIYKLEVTIIPTNRIRRREDLSDLVFKKEIGKWQAIARECAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL++QGIPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSQLLREQGIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + P++ ++ + + +AA L
Sbjct: 494 LGGNSEYMARLKLREYFM------------------PRI---VRPDDEDVFGVQRAAGLP 532
Query: 458 KYVGKAEG-------KSWTY----------QEAKSFFSESVEMS----QSMNLKELQKLI 496
G +G K+W +EA+ E+V+ + +L EL+
Sbjct: 533 TGHGAGQGFVPGKKVKTWKASPEIFPTQLSKEAEQLLKEAVDFAVREYGDRSLPELEAE- 591
Query: 497 DKQSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRR 549
DK + PT + Y + + E S E EV GGLHVIGT HESRR
Sbjct: 592 DKVAVAAEKAPTDDSVIQKLRDAYNRIKHEYEEFTSTEHDEVVGRGGLHVIGTERHESRR 651
Query: 550 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIV 609
IDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ ++DMPIE +
Sbjct: 652 IDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMEAFNVEDDMPIESGMLT 709
Query: 610 RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQA 669
R L G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y +
Sbjct: 710 RSLEGAQRKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYAEK 767
Query: 670 VVDEII--FGNVD-PLKHPRYWSLDKL---LKEFI 698
+DEI+ + NVD P + W LDKL +KEF+
Sbjct: 768 TMDEIVDYYINVDLPSEE---WELDKLVDKVKEFV 799
>gi|145345575|ref|XP_001417281.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|166918840|sp|A4RW83.1|SECA_OSTLU RecName: Full=Protein translocase subunit SecA, chloroplastic;
Flags: Precursor
gi|144577508|gb|ABO95574.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 932
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 367/931 (39%), Positives = 518/931 (55%), Gaps = 135/931 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RDA
Sbjct: 74 LRPFDVQLIGGMILHEGQIAEMRTGEGKTLVSALPAYLNALSGKGVHVVTVNDYLARRDA 133
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLG++ GLIQ GM EERR Y D+TY NSELGFDYLRDNLA N+ +LV
Sbjct: 134 EWIGQIHKFLGMTCGLIQAGMAEEERRVGYGSDVTYVTNSELGFDYLRDNLAQNTGELVQ 193
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F I+DEVDS+LIDE R PL+ISG A K RY AAK+A+ + HY V+ K
Sbjct: 194 R---DFNFCIIDEVDSILIDEARTPLIISGVADKPSERYIQAAKIADAFEKDYHYKVDEK 250
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV L+EEG AE L+ DL+D WA +++NA+KAKE +RDV YIVR + +I+
Sbjct: 251 QKSVLLSEEGYEAAEDLLQVTDLYDPRTQWALYIINAIKAKELQKRDVNYIVRGQEIIIV 310
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E +GR + RRWS+G+HQAVEAKEG+ IQ ++V +A +TYQ+ FK YPKL GMTGTA+T
Sbjct: 311 DEFSGRTMQGRRWSDGLHQAVEAKEGVTIQNETVTIASVTYQAFFKSYPKLGGMTGTAET 370
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P R D F + GKW R+E+ M + GRPVLVG+
Sbjct: 371 EITEFSNIYELEVAVVPTNRPVSREDSTDVVFRSETGKWNAVRKEISRMHKKGRPVLVGT 430
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE +++LL + GIP+ +LNA+P+ RE+E VAQ+GRK A+TI+TNMAGRGTDI+
Sbjct: 431 TSVERSEQIAELLDEDGIPYELLNAKPENVERESEIVAQSGRKGAVTIATNMAGRGTDIL 490
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ L RE+L V V+ E +A K L
Sbjct: 491 LGGNAEFMAR---------LRVRESLMQRV--------VMPE----DGEIAFEKKGNL-- 527
Query: 458 KYVGKAEGKSWTYQEA----------KSFFSESVEMSQSM-NLKELQKLIDKQSAMYPL- 505
K+ G W +E E+V+ + S+ + L+ L ++ +
Sbjct: 528 ---AKSGGNKWAVKEGLYPCELSAETAKMLGEAVDTACSVWGDRSLEALDAEERLSFACE 584
Query: 506 -GPTVALTYLSVLK-------DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
GP+ L++ K + +V+ S E EV LGGLHV+GT HESRR+DNQLRGR
Sbjct: 585 KGPSEDEAILALRKVFNAIEAEYKVYTSAEKKEVLGLGGLHVVGTERHESRRVDNQLRGR 644
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
+GRQGDPGSTR+ +SL+D +F+ F D A+ R+ EDMPIE + L Q
Sbjct: 645 SGRQGDPGSTRYFLSLEDNLFRIFGGDRIQALMSAFRV---EDMPIESGMLTNSLDEAQK 701
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E+Y++ IRK L ++D VL QR+ VY R+ LT + E +Q+ +Y + +D+I+
Sbjct: 702 KVERYFYDIRKQLFDYDAVLNSQREKVYFERRRALTASREQLQEQMLEYAELTIDDIVNA 761
Query: 678 NVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF 737
N+D + W L+ L+ GK+ + E++ DI
Sbjct: 762 NIDTSEPVSEWPLEGLV-------GKLRQYCYY-------------FGEIDESDI----- 796
Query: 738 PDLPKPPNLFRGIRRKSSSLKRWLAICSDD--LTKNGRYRATTNLLRKYLGDILIASYLN 795
+P G+ ++L+ +L D +TK G AT L
Sbjct: 797 ----RPIAEKGGV----NALRNFLVKKGQDAYMTKCGEVEATEAGL-------------- 834
Query: 796 VVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDG 855
M E ER ++ D W+ HL + + AV +R + ++PL EYK++G
Sbjct: 835 -----------MMEAERFFILSQTDNLWKQHLQAIKFVQQAVGLRGYAQKDPLIEYKLEG 883
Query: 856 CRFFISMLSATRRLTVESLVQYWSSPMESQE 886
+ M++ RR + S+ + +E +E
Sbjct: 884 FNLYTEMMAQIRRNVIYSVYMFQPQRLEQKE 914
>gi|427728804|ref|YP_007075041.1| Preprotein translocase subunit SecA [Nostoc sp. PCC 7524]
gi|427364723|gb|AFY47444.1| preprotein translocase, SecA subunit [Nostoc sp. PCC 7524]
Length = 930
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 375/935 (40%), Positives = 511/935 (54%), Gaps = 146/935 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILHTGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRF+GLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFMGLSVGLIQASMTPSERKKNYDCDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L Q HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIALTLRQDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL++ DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAEAEELLGVTDLFNPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DL F GKW+ +E M LGRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVAVIPTNRIRKREDLSDLVFKKETGKWQAIARECAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LLK QGIPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSQLLKAQGIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + P++ ++ + + +AA L
Sbjct: 494 LGGNSEYMARLKLREYFM------------------PRI---VRPDDEDVFGVQRAAGLP 532
Query: 458 KYVGKAEG-------KSWTY----------QEAKSFFSESVEMS----QSMNLKELQKLI 496
G +G K+W +EA+ E+V+ + +L EL+
Sbjct: 533 TGHGGGQGFVPGKKVKTWKASPEIFPTQLSKEAEQLLKEAVDFAVREYGERSLPELEAE- 591
Query: 497 DKQSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRR 549
DK + PT + Y V ++ E E +EV GGLHVIGT HESRR
Sbjct: 592 DKVAVAAEKAPTEDPVIQKLRDAYKRVKQEYEDFTEREHNEVVERGGLHVIGTERHESRR 651
Query: 550 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIV 609
IDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ ++DMPIE +
Sbjct: 652 IDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMEAFNVEDDMPIESGMLT 709
Query: 610 RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQA 669
R L G Q E YY+ IRK Q+F+Y
Sbjct: 710 RSLEGAQKKVETYYYDIRK---------------------------------QVFEY--- 733
Query: 670 VVDEIIFGNVDPLKHPRYWSLD--KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPEL 727
DE++ + R L+ L ++ I A K +DD+
Sbjct: 734 --DEVMNNQRRAIYAERRRVLEGQDLKEQVIKYAEKTMDDI------------------- 772
Query: 728 NSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD 787
++ + DLP + K +K ++ + SD + + ++ +L +
Sbjct: 773 ----VDYYINADLPSEEWELEKLVEK---VKEFVYLLSD-MQASQLEDMGVGEIKAFLHE 824
Query: 788 -ILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRN 846
+ IA L Q + M++ ER +++ +D WR+HL M+ L +V +R +G ++
Sbjct: 825 QVRIAYDLKEAQIDQIQPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKD 884
Query: 847 PLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
PL EYK +G F+ M+ RR V SL + P
Sbjct: 885 PLIEYKSEGYELFLDMMVNIRRDVVYSLFMFQPQP 919
>gi|425455063|ref|ZP_18834788.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9807]
gi|389804119|emb|CCI17025.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9807]
Length = 938
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 371/927 (40%), Positives = 515/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VL+ G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLNKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGAIDRPTEKYILAAEIANKLVRQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE LE DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKKAEELLEVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQY---- 774
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
A K +D++
Sbjct: 775 ------------------------------AEKTMDEI---------------------- 782
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
+ + P+LP + KS LA D+T + N ++ +L + +
Sbjct: 783 -VTAYVNPELPAEEWDLEKLISKSQEFVHLLA----DITAKDVEDMSVNDIKMFLHEEVR 837
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
+Y ++E + D++ M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 838 KAY--EIKERQVDNIRAGLMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|334121646|ref|ZP_08495705.1| Protein translocase subunit secA [Microcoleus vaginatus FGP-2]
gi|333454794|gb|EGK83482.1| Protein translocase subunit secA [Microcoleus vaginatus FGP-2]
Length = 938
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 377/925 (40%), Positives = 519/925 (56%), Gaps = 123/925 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 LRHFDVQLLGGIILHKGQIAEMKTGEGKTLVATLPAYLNALNGKGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ+GM ER+ NY CDITY NSE+GFDYLRDN+A E +V
Sbjct: 144 EWMGQVHRFLGLTVGLIQQGMDQVERKKNYNCDITYATNSEVGFDYLRDNMATVMEDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQG--LHYTVE 155
R PF+F ++DEVDSVLIDE R PL+ISG+ + +Y AA+VA L + HY V+
Sbjct: 204 R---PFNFCVIDEVDSVLIDEARTPLIISGQVERPSEKYLRAAEVAAALRKEDEEHYEVD 260
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR-NGKA 214
K +V LT+EG AE L DL+D DPWA ++ NA+KAKE + +D+ YIV + +
Sbjct: 261 EKARNVLLTDEGFGEAERLLGVTDLYDPADPWAHYIFNAIKAKELFIKDINYIVNADREV 320
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGRV RRWS+G+HQA+EAKE +IQ ++ +A ITYQ+ F LYPKLSGMTGT
Sbjct: 321 VIVDEFTGRVMPGRRWSDGLHQAIEAKERAEIQPETQTLATITYQNFFLLYPKLSGMTGT 380
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
AKTEE EF K++ + V +PTN R DL + GKW Q+ M +GRPVL
Sbjct: 381 AKTEETEFEKIYNLEVTLIPTNRITSRTDLSDMVYKAEAGKWNAIAQDCAEMHEIGRPVL 440
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+TSVE SE LS LL ++ IPHN+LNA+P+ RE+E +AQAGRK A+TI+TNMAGRGT
Sbjct: 441 VGTTSVEKSELLSRLLLERKIPHNLLNAKPENVERESEIIAQAGRKGAVTIATNMAGRGT 500
Query: 395 DIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
DIILGGN + +A+ + + + + + E +D S +V G S A
Sbjct: 501 DIILGGNSEYMARLKLREYFMPRIVQP----EDEDGFSVVQVP-----GISGRPAPQGFA 551
Query: 455 LLAKYVG--KAEGKSWTYQ---EAKSFFSESVEMS----QSMNLKELQK------LIDKQ 499
K V KA + + Q A+ +VE++ +L ELQ +K
Sbjct: 552 PTTKKVKSWKASAQIFPTQLSKNAEQMLKAAVELAVKEYGERSLSELQADDIVAIASEKA 611
Query: 500 SAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAG 559
P+ + Y + + S E EV +LGGLHVIGT HESRRIDNQLRGRAG
Sbjct: 612 PTKDPVIQKLREAYNLTRSEYDAFTSTEHDEVVQLGGLHVIGTERHESRRIDNQLRGRAG 671
Query: 560 RQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA 619
RQGDPGSTRF +SL+D + + F + L+ +EDMPIE + R L G Q
Sbjct: 672 RQGDPGSTRFFLSLEDNLLRIFGGER--VAGLMKAFGVEEDMPIESGMLTRSLEGAQKKV 729
Query: 620 EKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNV 679
E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D+I+ +
Sbjct: 730 ETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--SKEQVIKYAEQTMDDIVGAYI 787
Query: 680 DPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
+P W LDKL+ KEF+ L A ++ D +L +L+ +I F
Sbjct: 788 NPDLPSEEWELDKLVSKVKEFVY--------LLADMTPD-------QLEDLSVEEIKTFL 832
Query: 737 FPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNV 796
+ R + +K A N +R L
Sbjct: 833 HEQV-----------RNAYDIKE----------------AEVNAIRAEL----------- 854
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G
Sbjct: 855 ----------MRDAERFFILQQIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKTEGY 904
Query: 857 RFFISMLSATRRLTVESLVQYWSSP 881
F+ M++ RR V SL Q+ P
Sbjct: 905 ELFLDMMTDIRRNVVYSLFQFQPQP 929
>gi|449435494|ref|XP_004135530.1| PREDICTED: protein translocase subunit SECA1, chloroplastic-like
[Cucumis sativus]
Length = 1025
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 376/908 (41%), Positives = 510/908 (56%), Gaps = 115/908 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 152 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALTGKGVHVVTVNDYLARRDC 211
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M EERR NY DITY NSELGFDYLRDNLA + E+LV+
Sbjct: 212 EWVGQVPRFLGLKVGLIQQNMTSEERRENYLSDITYVTNSELGFDYLRDNLATSVEELVL 271
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F + ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV+ K
Sbjct: 272 R---DFSYCVIDEVDSILIDEARTPLIISGPAEKPSDRYYKAAKLASAFERDIHYTVDEK 328
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G AE L DL+D + WA +V+NA+KAKE + RDV YI+R + LI+
Sbjct: 329 QKTVLLTEQGYEDAEEILNVKDLYDPREQWASYVLNAIKAKELFLRDVNYIIRGKEVLIV 388
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 389 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 448
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P +R D F GKW E+ M + GRPVLVG+
Sbjct: 449 ESTEFESIYKLKVTIVPTNKPMVRKDESDVVFRATAGKWRAVVVEISRMHKTGRPVLVGT 508
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS L++ GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 509 TSVEQSDALSAQLQEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 568
Query: 398 LGGNPKMLA----KKIIEDRLLLLLTREALNVEVDDKTSSPKV---LSEIKLGSSSLALL 450
LGGN + +A ++++ RL+ L ++V+ + KV L L S + L
Sbjct: 569 LGGNAEFMARLKLRELLMPRLVKLTNGAFVSVKKPPPKKTWKVNESLFPCDLSSENAKLA 628
Query: 451 AKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
+A A K G+ KS T EA+ S S E + + + KL +
Sbjct: 629 EEAVQFAVKTWGQ---KSLTELEAEERLSYSCEKGPAQD-DVIAKLRN------------ 672
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L ++K+ +V E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 673 --AFLEIVKEYKVFTEEERKKVVLAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 730
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + + R ED+PIE + + L Q E Y+F IRK
Sbjct: 731 FLSLEDNIFRIFGGDR---IQGLMRAFRVEDLPIESQMLTKALDEAQRKVENYFFDIRKQ 787
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L E+DEVL QR VY R+ L ++S I +Y + +D+I+ N+ W
Sbjct: 788 LFEYDEVLNSQRDRVYTERRRAL--ESDSLQALIIEYAELTMDDILEANIGSDTPTESWD 845
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L+KL+ + + +LDDL P+L R
Sbjct: 846 LEKLIAK-VQQYCYLLDDL----------------------------------TPDLIRS 870
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
SL+ +L R R L+K DI+ + MKE
Sbjct: 871 KYPTYESLQNYL-----------RLRGREAYLQKR--DIV----------EKEAPGLMKE 907
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 908 AERFLILSNIDRLWKEHLQAIKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN 967
Query: 870 TVESLVQY 877
+ S+ Q+
Sbjct: 968 VIYSIYQF 975
>gi|425441309|ref|ZP_18821587.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9717]
gi|389718023|emb|CCH97976.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9717]
Length = 938
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 371/927 (40%), Positives = 515/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQEVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRNIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQY---- 774
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
A K +D++
Sbjct: 775 ------------------------------AEKTMDEI---------------------- 782
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
+ + P+LP + KS LA D+T + N ++ +L + +
Sbjct: 783 -VMAYVNPELPAEEWDLEKLISKSQEFVYLLA----DITAKDVEDMSVNDIKMFLHEEVR 837
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
+Y ++E + D++ M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 838 KAY--EIKERQVDNIRAGLMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|428209024|ref|YP_007093377.1| protein translocase subunit secA [Chroococcidiopsis thermalis PCC
7203]
gi|428010945|gb|AFY89508.1| protein translocase subunit secA [Chroococcidiopsis thermalis PCC
7203]
Length = 930
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 374/923 (40%), Positives = 518/923 (56%), Gaps = 130/923 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 MRHFDVQLLGGIILHQGQIAEMKTGEGKTLVATLPSYLNALTGKGAHVVTVNDYLAKRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P+ER+ NY CDITY NSE+GFDYLRDN+A + + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQSMTPDERKRNYACDITYVTNSEVGFDYLRDNMATHMDDVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F ++DEVDS+LIDE R PL+ISG+ K +Y A+++A L + HY V+ K
Sbjct: 197 R---PFNFCVIDEVDSILIDEARTPLIISGQVEKPTEKYIRASQIAAALQKDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL++ +DPWA FV NALKAKE + DV YIVR + +I+
Sbjct: 254 ARNVLLTDEGFAAAEELLGVTDLFNPDDPWAHFVFNALKAKELFLGDVNYIVREDEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNLFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E+ EF K++++ V +PTN R DL + GKW QE M GRPVLVG+
Sbjct: 374 EQAEFEKIYKLEVASIPTNRTTKRRDLSDVVYKNEAGKWRAIAQECAEMHEKGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVENSE LS LL Q IP+N+LNARP+ RE+E +AQAGRK A+TI+TNMAGRGTDII
Sbjct: 434 TSVENSEVLSRLLNQLEIPYNLLNARPENVERESEIIAQAGRKGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + + D+ + + + + GSSS + +
Sbjct: 494 LGGNADYMARLKLREYFMPRIV-----MPEDEDVFAVQRAAGLPTGSSS----GQGFVPG 544
Query: 458 KYVGKAEGKSWTY-----QEAKSFFSESVEMS-QSMNLKELQKLI--DKQSAMYPLGPT- 508
K V + Y +E + +VE++ Q + L +L DK + PT
Sbjct: 545 KKVKTWKASPQIYPVELSRETEQMLKAAVEVAAQEYGERSLSELEAEDKVAVASEKAPTD 604
Query: 509 ------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
+ Y + + E + E EV LGGLHVIGT HESRRIDNQLRGRAGRQG
Sbjct: 605 DVVIQRLREVYNQIKHEYEQFTTKEHDEVVGLGGLHVIGTERHESRRIDNQLRGRAGRQG 664
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPGSTRF +SL+D + + F D L+ +EDMPIE + R L G Q E Y
Sbjct: 665 DPGSTRFFLSLEDNLLRIFGGDR--VAGLMQAFNVEEDMPIESGLLTRSLEGAQRKVETY 722
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
Y+ IRK Q+F+Y DE+
Sbjct: 723 YYDIRK---------------------------------QVFEY-----DEV-------- 736
Query: 683 KHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF-PDLP 741
++K + A ++L+ G L + + + E +I ++Y PDLP
Sbjct: 737 -------MNKQRRAIYAERRRVLE-------GQDLKEQVLKYGEQTMNEIVDYYINPDLP 782
Query: 742 KP----PNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVV 797
P L S +K ++ + +D L T + ++ +L + + +Y +
Sbjct: 783 SEDWDIPKLV-------SKVKEFVYLLAD-LEPEQMEDLTVSDIKAFLHEQVRIAY--DI 832
Query: 798 QESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKID 854
+E+ + + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +
Sbjct: 833 KEAEIEQIRPGLMRQAERFFILQQIDSLWREHLQQMDGLRESVGLRGYGQKDPLIEYKTE 892
Query: 855 GCRFFISMLSATRRLTVESLVQY 877
G F+ M++ RR V SL Q+
Sbjct: 893 GFEMFLDMMTNIRRNVVYSLFQF 915
>gi|282896998|ref|ZP_06305000.1| SecA protein [Raphidiopsis brookii D9]
gi|281197650|gb|EFA72544.1| SecA protein [Raphidiopsis brookii D9]
Length = 930
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 341/738 (46%), Positives = 463/738 (62%), Gaps = 54/738 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILHTGQIAEMKTGEGKTLVATLPSYLNALSNKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLG+SVGLIQ MIP ER+ NY CDITY NSE+GFDYLRDN+A + E++V
Sbjct: 137 EWMGQIHRFLGMSVGLIQSTMIPIERKKNYDCDITYVTNSEVGFDYLRDNMATSMEEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAFTLKKDDHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT++G A AE L DL+D +PWA FV N +KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDDGFAEAENLLGVTDLFDPENPWAHFVFNGIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNLFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PT+ R DL F T GKW +E E M + GRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVSVIPTHRTRKRQDLSDMVFKTESGKWGAIARECEEMHKGGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL+++GIPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLQEKGIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGS---SSLALLAKAA 454
LGGN + +A+ + + + + R DD+ S + S + +G+ S +
Sbjct: 494 LGGNSEYMARLKLREYFMPRIVRPG-----DDQFSIQRA-SGLPIGNGNGSGQGFVPGKK 547
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMS----QSMNLKELQKLIDKQSAMYPLGPT-- 508
L V + Q ++ E+VE++ S L EL+ DK + PT
Sbjct: 548 LKTWRVSGGIFPTELSQVTENLLKEAVEVAVNAYGSRALSELEAE-DKVAIAAEKAPTDD 606
Query: 509 -----VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGD 563
+ Y ++ ++ E E EV GGLHVIGT HESRRIDNQLRGR+GRQGD
Sbjct: 607 AVVQKLRDAYQTIKQEYEKFTEAEHVEVVNNGGLHVIGTERHESRRIDNQLRGRSGRQGD 666
Query: 564 PGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYY 623
PG+TRF +SL+D + + F D L++ +EDMPIE + R L G Q E YY
Sbjct: 667 PGTTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGLLTRSLEGAQKKVETYY 724
Query: 624 FGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK 683
+ IRK + E+DEV+ QR+ +Y R+ +L G E +Q+ +Y + +D+I+ ++P
Sbjct: 725 YDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--EDLKEQVVKYAEKTMDDIVNYYINPEL 782
Query: 684 HPRYWSLDKL---LKEFI 698
W L+KL +KEF+
Sbjct: 783 PSEEWDLEKLVGKVKEFV 800
>gi|282900465|ref|ZP_06308414.1| SecA protein [Cylindrospermopsis raciborskii CS-505]
gi|281194658|gb|EFA69606.1| SecA protein [Cylindrospermopsis raciborskii CS-505]
Length = 928
Score = 617 bits (1591), Expect = e-173, Method: Compositional matrix adjust.
Identities = 344/762 (45%), Positives = 470/762 (61%), Gaps = 74/762 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGVILHTGQIAEMKTGEGKTLVATLPSYLNALSNKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLG++VGLIQ MIP ER+ NY CDITY NSE+GFDYLRDN+A + E++V
Sbjct: 137 EWMGQIHRFLGMTVGLIQSTMIPIERKKNYDCDITYVTNSEVGFDYLRDNMATSMEEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAFTLKKDDHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT++G A AE L DL+D +PWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDDGFAEAENLLGVTDLFDPENPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNLFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PT+ R DL F T GKW +E E M + GRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVSVIPTHRTRKRQDLSDMVFKTEPGKWGAIARECEEMHKGGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL+++GIPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLQEKGIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + + R +D S + S + G+ S
Sbjct: 494 LGGNSEYMARLKLREYFMPRIVRP------EDDQFSIQRASGLPTGNGS---------GQ 538
Query: 458 KYVGKAEGKSWTY----------QEAKSFFSESVEMS----QSMNLKELQKLIDKQSAMY 503
+V + K+W Q + E+VE++ S L EL+ DK +
Sbjct: 539 GFVPGKKSKNWRVSREIFPTDLSQVTEKLLKEAVEVAVNAYGSRALSELEAE-DKVAIAA 597
Query: 504 PLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
PT + Y ++ ++ E E EV GGLHVIGT HESRRIDNQLRG
Sbjct: 598 EKAPTDDAVVQKLRDAYQTIKQEYEKFTEAEHVEVVNNGGLHVIGTERHESRRIDNQLRG 657
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
R+GRQGDPG+TRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 658 RSGRQGDPGTTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGLLTRSLEGAQ 715
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YY+ IRK + E+DEV+ QR+ +Y R+ +L G E +Q+ +Y + +D+I+
Sbjct: 716 KKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--EDLKEQVIKYAEKTMDDIVN 773
Query: 677 GNVDPLKHPRYWSLDKL---LKEFIAIAGKI----LDDLFAG 711
++P W L+KL +KEF+ + + L+D+ G
Sbjct: 774 YYINPELPSEEWDLEKLVGKVKEFVYLLADMQPTQLEDMGVG 815
>gi|425468953|ref|ZP_18847928.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9701]
gi|389884391|emb|CCI35311.1| Protein translocase subunit secA [Microcystis aeruginosa PCC 9701]
Length = 938
Score = 617 bits (1590), Expect = e-173, Method: Compositional matrix adjust.
Identities = 371/927 (40%), Positives = 513/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQSGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGAIDRPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+++ IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQERKIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E ++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLLELEAEE 602
Query: 495 LIDKQSAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I + P V Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDQVIQKLREVYKLIRKTYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQY---- 774
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
A K +D++
Sbjct: 775 ------------------------------AEKTMDEI---------------------- 782
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
+ + P+LP + KS LA D+T + N ++ +L + +
Sbjct: 783 -VMAYVNPELPAEEWDLEKLISKSQEFVYLLA----DITAKDVEDMSVNDIKMFLHEEVR 837
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
+Y ++E + D++ M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 838 KAY--EIKERQVDNIRAGLMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|220909028|ref|YP_002484339.1| preprotein translocase subunit SecA [Cyanothece sp. PCC 7425]
gi|254767910|sp|B8HSJ5.1|SECA_CYAP4 RecName: Full=Protein translocase subunit SecA
gi|219865639|gb|ACL45978.1| preprotein translocase, SecA subunit [Cyanothece sp. PCC 7425]
Length = 932
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 333/746 (44%), Positives = 450/746 (60%), Gaps = 65/746 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LHDG IAEMKT ++TVNDYLA+RDA
Sbjct: 77 LRHFDVQLLGGMILHDGQIAEMKTGEGKTLVSTLPAYLNALTGKGVQIITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P+ER+ NY CDITY NSE+GFDYLRDN+A + ++V+
Sbjct: 137 EWMGQVHRFLGLSVGLIQQSMPPQERQKNYACDITYATNSEIGFDYLRDNMATSMAEVVL 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PFH+ ++DEVDSVLIDE R PL+ISG+ + +Y A +A+ L + HY V+ K
Sbjct: 197 R---PFHYCVIDEVDSVLIDEARTPLIISGQVERPTEKYLRATAIADALQKEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+EG AE L DL+D DPWA ++ NA+KAKE + +DV YI+R G+ +I+
Sbjct: 254 ARNILLTDEGFIEAEKLLGVKDLFDSQDPWAHYIFNAVKAKELFIKDVNYIIRGGEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEGL IQ +S +A ITYQ+LF LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKEGLDIQNESQTLATITYQNLFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V VPTN R DLP + KW E + GRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVTVVPTNRATGRRDLPDVVYKNEMAKWRAVAAECAEFHQAGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL Q GIPHN+LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEVLSQLLNQAGIPHNLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + V ++ P + I +G + A
Sbjct: 494 LGGNADYMARLKVREYFMPRI--------VMPESDDPLAMMRIMMGDGN----ASGGQGF 541
Query: 458 KYVGKAEGKSW--------------TYQEAKSFFSESVEMSQSMNLKELQK------LID 497
G K+W T Q K+ +V+ ++ ELQ +
Sbjct: 542 APQGNRPQKTWKASPNIFPTKLSRETEQLLKAAVDFAVKQYGERSIPELQAEDIVAIASE 601
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K P+ + Y + + E E EV + GGLHVIGT HESRR+DNQLRGR
Sbjct: 602 KAPTEDPVVQRLREAYNQIRSEYETFTHQEHDEVVQFGGLHVIGTERHESRRVDNQLRGR 661
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + L Q
Sbjct: 662 AGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESRILTGSLENAQR 719
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ IRK + E+D+V+ QR+ +Y R+ +L G E +++ +Y + +D+I+
Sbjct: 720 KVETYYYDIRKQVFEYDDVMNNQRRAIYAERRRVLEG--EDLKERVLEYAERTMDDIVEA 777
Query: 678 NVDPLKHPRYWSLDKL---LKEFIAI 700
V+P P W L+ + +KEF+ +
Sbjct: 778 YVNPDLPPEEWDLNSMVGKVKEFVNL 803
>gi|428300797|ref|YP_007139103.1| protein translocase subunit secA [Calothrix sp. PCC 6303]
gi|428237341|gb|AFZ03131.1| protein translocase subunit secA [Calothrix sp. PCC 6303]
Length = 931
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 369/928 (39%), Positives = 513/928 (55%), Gaps = 131/928 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQMLGGIILHTGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P+ERR NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQSMTPQERRKNYDCDITYVTNSEIGFDYLRDNMATSITDVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y A+++A L HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYVRASQIASALQIDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V L++EG A AE LE DL+D +PWA F+ NALKAKE +++DV YIVRNG+ +I+
Sbjct: 254 ARNVLLSDEGFAEAEKLLEVTDLFDPEEPWAHFIFNALKAKELFKKDVTYIVRNGEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN +R DL F T GKW +E + M+ LGRPVLVG+
Sbjct: 374 EEAEFGKIYKLDVTIIPTNRTRLRKDLSDMVFKTEHGKWVAIARECKEMYELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LLK+ IPH +LNARP+ REAE VAQAGR A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSRLLKEIEIPHELLNARPENVEREAEIVAQAGRGGALTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + + V+ DD+ + + +S + +
Sbjct: 494 LGGNSEYMARLKLREYFMPRI------VQPDDEDN-------FGVQQASGLPSSSSGGGQ 540
Query: 458 KYVGKAEGKSW--------------TYQEAKSFFSESVEMSQSMNLKELQK------LID 497
+V + K+W T ++ K+ +V +L EL+ +
Sbjct: 541 GFVPGKKVKTWRASPEIFPTQISKETEKQLKAAVDFAVREYGERSLPELEAEERIAVAAE 600
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K P+ + Y + + E E +V LGGLHVIGT HESRRIDNQLRGR
Sbjct: 601 KAPTDDPVIQKLRDAYNQIKNEYETFTKTEHDKVVDLGGLHVIGTERHESRRIDNQLRGR 660
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPG+TRF +SL+D + + F D L+ +EDMPIE + L G Q
Sbjct: 661 AGRQGDPGTTRFFLSLEDNLMRIFGGDR--VAKLMEVFQVEEDMPIESKMLTNSLEGAQK 718
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ IRK Q+F+Y DE++
Sbjct: 719 KVETYYYDIRK---------------------------------QVFEY-----DEVMNN 740
Query: 678 NVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF 737
+ R L+ L L + + + EL DI N+Y
Sbjct: 741 QRRAIYAERRRVLEGL----------------------DLKEQVIKYAELTMDDIINYYI 778
Query: 738 P-DLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNV 796
DLP + K +K ++ + SD L + + ++ +L + + +Y
Sbjct: 779 NIDLPSEEWELEKLVEK---VKEFVYLLSD-LQADQLIDMSVTDIKAFLHEQVRIAY--D 832
Query: 797 VQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
++E D + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 833 MKEGEIDQIQAGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKS 892
Query: 854 DGCRFFISMLSATRRLTVESLVQYWSSP 881
+G F+ M+ RR V SL + P
Sbjct: 893 EGYELFLEMMVNIRRDVVYSLFMFQPQP 920
>gi|443329334|ref|ZP_21057921.1| preprotein translocase, SecA subunit [Xenococcus sp. PCC 7305]
gi|442791076|gb|ELS00576.1| preprotein translocase, SecA subunit [Xenococcus sp. PCC 7305]
Length = 941
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 365/941 (38%), Positives = 522/941 (55%), Gaps = 148/941 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQI+GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHYDVQILGGIVLHKGQIAEMKTGEGKTLVCTLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL+VGLIQ GM P ERR NY CDITYT NSELGFDYLRDN+A + E++V
Sbjct: 144 EWMGQIHRFLGLTVGLIQAGMNPVERRKNYDCDITYTTNSELGFDYLRDNMATSIEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ--------- 148
R PF + ++DEVDSVL+DE R PL+ISG+ + +Y AA++A +L +
Sbjct: 204 R---PFSYCVIDEVDSVLVDEARTPLIISGQVERPSEKYVRAAEIAAMLEKQENEGTEEE 260
Query: 149 --GLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K +V +T++G A AE L+ DL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 EGDGDYEVDEKARNVLMTDQGFARAEQLLKVKDLYDPEDPWAHYISNALKAKELFTKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
Y+VRNG+ +I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YLVRNGEIVIVDEFTGRVMVGRRWSDGLHQAIEAKEGVQIQKETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
KL+GMTGTAKTEE EF K++ + V +PTNLP+ R DL + GKW+ +
Sbjct: 381 KLAGMTGTAKTEETEFEKVYNLQVTIIPTNLPSRRDDLADVVYKKEIGKWQAVADDCSQN 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+GRPVLVG+TSVE SE L+ LL ++ IPHN+LNARP+ RE+E VAQAGR+ ++TI+
Sbjct: 441 HEMGRPVLVGTTSVEKSELLASLLAKKKIPHNLLNARPENVERESEIVAQAGRQGSVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSS 445
TNMAGRGTDIILGGN +A+ I + L+ PK V+ E +
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKIREYLM------------------PKIVIPEDDELMA 542
Query: 446 SLALLAKAALLAKYVGKAEGKSWTYQEAKSFF-----SESVEM-------------SQSM 487
++ L K + G+ K T++ + F ++++M QS+
Sbjct: 543 NVPQLTKKKKAPQGFGEGAPKKKTWRASADIFPTELSDKTIKMLTDAVKFAVKEYGEQSL 602
Query: 488 NLKELQKLI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTS 543
+ + ++ I + A P+ + Y + + + E EV GGLHVIGT
Sbjct: 603 SELDAEEKIAIAAENSPAEDPVIEQLREVYKVIRAEYDEFTDREHEEVIAKGGLHVIGTE 662
Query: 544 LHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPI 603
HESRR+DNQLRGRAGRQGDPGSTRF +SL D + + F D + + R+ ++DMPI
Sbjct: 663 RHESRRVDNQLRGRAGRQGDPGSTRFFLSLDDNLLRIFGGDRVGKLMEMMRV--EDDMPI 720
Query: 604 EGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQI 663
E + L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+
Sbjct: 721 ESKMLTNSLEGAQKKVETFYYDSRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQV 778
Query: 664 FQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+Y + K++EE
Sbjct: 779 IEYAE--------------------------------------------------KTMEE 788
Query: 724 LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRK 783
+ ++ + P+LP + KS LA D+ T N ++
Sbjct: 789 I-------VDAYVNPELPPEEWQLDKMVAKSQEFIYLLA----DVKPEHLEDMTVNEMKT 837
Query: 784 YLGDILIASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR 840
+L + + +Y ++E++ D M++ ER +++ +D WR+HL M+ L ++ +R
Sbjct: 838 FLKEEVRKAY--DIKENQVDSNQPGLMRQAERFFILQQIDTLWREHLQAMDALKESIGLR 895
Query: 841 SFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+G ++PL EYK +G F+ M+ RR V SL Q+ P
Sbjct: 896 GYGQKDPLIEYKQEGYEMFLEMMIDIRRNVVYSLFQFKPQP 936
>gi|427717984|ref|YP_007065978.1| protein translocase subunit secA [Calothrix sp. PCC 7507]
gi|427350420|gb|AFY33144.1| protein translocase subunit secA [Calothrix sp. PCC 7507]
Length = 930
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 378/929 (40%), Positives = 506/929 (54%), Gaps = 134/929 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+ GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQLQGGIILHSGQIAEMKTGEGKTLVATLPSYLNALSGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ MIP ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSSMIPSERQKNYDCDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAFTLKPEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAEAEELLGVTDLFDPEDPWAHFVFNAIKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVDIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R D F T GKW +E M GRPVLVG+
Sbjct: 374 EEPEFEKIYKLEVTVIPTNRIRRREDWSDMVFKTEPGKWGAIAKECAQMHEQGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ IPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLKEMAIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + + V+ +D+ + G +A L A+
Sbjct: 494 LGGNSEYMARLKLREYFMPRI------VQPEDEDT---------FGVQRVAGLPSASGGG 538
Query: 458 K-YVGKAEGKSWTY----------QEAKSFFSESVEMS----QSMNLKELQK------LI 496
+ +V + K+W ++A+ E+VE + +L EL+
Sbjct: 539 QGFVPGKKVKTWRASPEIFPTQLSKDAEQQLKEAVETAVKEYGDRSLPELEAEDKIAVAA 598
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
+K P+ + Y + ++ E E EV LGGLHVIGT HESRRIDNQLRG
Sbjct: 599 EKAPIDDPVIQKLRAAYNRIKQEYEQFTEREHDEVVELGGLHVIGTERHESRRIDNQLRG 658
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 659 RAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSLEGAQ 716
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YY+ IRK Q+F+Y DE++
Sbjct: 717 KKVETYYYDIRK---------------------------------QVFEY-----DEVMN 738
Query: 677 GNVDPLKHPRYWSLD--KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINN 734
+ R L+ L ++ I A K +DD I +
Sbjct: 739 NQRRAIYAERRRVLEGQDLKEQVIKYAEKTMDD------------------------IVD 774
Query: 735 FYF-PDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGD-ILIAS 792
FY PDLP + K LA DL N + ++ +L + + IA
Sbjct: 775 FYINPDLPSEEWDLEKLVEKVKEFVYLLA----DLQPNQLEDMSVTEIKAFLHEQVRIAY 830
Query: 793 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
L Q + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 831 DLKEAQIDQVQPGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYK 890
Query: 853 IDGCRFFISMLSATRRLTVESLVQYWSSP 881
+G F+ M+ RR V SL + P
Sbjct: 891 SEGYELFLDMMVNIRRDVVYSLFMFQPQP 919
>gi|166365937|ref|YP_001658210.1| preprotein translocase subunit SecA [Microcystis aeruginosa
NIES-843]
gi|226732220|sp|B0JLJ4.1|SECA_MICAN RecName: Full=Protein translocase subunit SecA
gi|166088310|dbj|BAG03018.1| preprotein translocase SecA subunit [Microcystis aeruginosa
NIES-843]
Length = 938
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 370/927 (39%), Positives = 513/927 (55%), Gaps = 141/927 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHKGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEER+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQAGMSPEERKKNYACDITYTTNSELGFDYLRDNMATVMGEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R PF++ ++DEVDS+LIDE R PL+ISG + +Y +AA++A+ LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGPIDRPTEKYILAAEIAKQLVRQKVEDGPGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V K+ +V +T+EG AE L DL+D+ +PWA ++ NA++AKE ++DV YIVR+
Sbjct: 261 YEVNEKDRNVLMTDEGFKRAEELLGVTDLYDQENPWAHYISNAIRAKELQKKDVNYIVRS 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGRV RRW +G+HQAVEAKEG++IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 GEIVIVDEFTGRVLPGRRWGDGLHQAVEAKEGVEIQQETQTLATITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + + KW +E + M GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRVSRRQDLADVVYKNEQAKWNAVAEECQQMHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+ + IPHN+LNARP+ RE+E VAQAGR A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVLSLLLQGRNIPHNLLNARPENVERESEIVAQAGRAGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSSLALL 450
RGTDIILGGN +A+ I + L+ PK V+ E + SL L
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLM------------------PKLVMPEDDNLAFSLPSL 542
Query: 451 AKAALLAKYVGKAEGKSWTY----------QEAKSFFSESVEM------SQSMNLKELQK 494
+ + + K+W +E ++ E+V+ +QS+ E+++
Sbjct: 543 GERNRPQGFAPGKKKKNWRASAEIFPTELPKEVENALKEAVKFAVDTHGTQSLPELEVEE 602
Query: 495 LI----DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I +K P+ + Y + K E + E EV GGLHVIGT HESRRI
Sbjct: 603 KIAIAAEKAPTDDPVIQKLREVYKLIRKSYEDYTGKEHDEVVERGGLHVIGTERHESRRI 662
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGST F +SL+D + + F D L+ +EDMPIE + R
Sbjct: 663 DNQLRGRAGRQGDPGSTHFFLSLEDNLLRIFGGDR--VAGLMDAFRVEEDMPIESGMLTR 720
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY
Sbjct: 721 SLEGAQRKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGMD--LKEQVLQY---- 774
Query: 671 VDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSI 730
A K +D++
Sbjct: 775 ------------------------------AEKTMDEI---------------------- 782
Query: 731 DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILI 790
+ + P+LP + KS LA D+T + N ++ +L + +
Sbjct: 783 -VMAYVNPELPAEEWDLEKLISKSQEFVYLLA----DITAKDVEEMSVNDIKMFLHEEVR 837
Query: 791 ASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNP 847
+Y ++E + D + M++ ER +++ +D WR+HL M L ++ +R +G ++P
Sbjct: 838 KAY--EIKERQVDSIRAGLMRDAERYFILQQIDMLWREHLQAMEALRESIGLRGYGQKDP 895
Query: 848 LEEYKIDGCRFFISMLSATRRLTVESL 874
L EYK +G F+ M+ RR V SL
Sbjct: 896 LIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|356534910|ref|XP_003535994.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like
[Glycine max]
Length = 1014
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 369/910 (40%), Positives = 512/910 (56%), Gaps = 119/910 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 146 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLNALSGKGVHVVTVNDYLARRDC 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M ++R+ NY CDITY NSELGFDYLRDNLA + E LV+
Sbjct: 206 EWVGQVPRFLGLKVGLIQQNMTSQQRKENYSCDITYVTNSELGFDYLRDNLATSVEDLVI 265
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ I+DEVDS+LIDE R PL+ISG A K RY AAK+AE + +HYTV+ K
Sbjct: 266 RG---FNYCIIDEVDSILIDEARTPLIISGPAEKPSDRYYKAAKIAEAFERDIHYTVDEK 322
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV L+E+G +E L DL+D + WA +++NA+KAKE + RDV YI+R + LI+
Sbjct: 323 QKSVLLSEQGYEDSEEILAVKDLYDPREQWASYILNAIKAKELFLRDVNYIIRGKEVLIV 382
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 383 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 442
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GRPVLVG+
Sbjct: 443 ESTEFESIYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGRPVLVGT 502
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS+ LK+ GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 503 TSVEQSDSLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 562
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI-------KLGSSSLALL 450
LGGN + +A+ + + L+ + + + V K P + ++ +L + ++ L
Sbjct: 563 LGGNAEFMARLKLREILMPRVVKPSEEGFVSIKKPPPSKIWKVNEKLFPCQLSNKNVDLA 622
Query: 451 AKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
KA LA + GK +S T EA+ S + E + + + + KL +
Sbjct: 623 EKAVQLAVETWGK---RSLTELEAEERLSYTCEKGPAQD-EVIAKLRN------------ 666
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L + K+ +V E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 667 --AFLEIGKEYKVFTEEERKKVVEAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 724
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + R+ ED+PIE + + L Q E Y+F IRK
Sbjct: 725 FLSLEDNIFRIFGGDRIQGLMQAFRV---EDLPIESKMLTKALDEAQRKVENYFFDIRKQ 781
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L E+DEVL QR VY R+ L N + +Y + +D+I+ N+ W
Sbjct: 782 LFEYDEVLNSQRDRVYTERRRALESDN--LQSLLIEYAELTMDDILEANIGSDAPKDSWD 839
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L+KL + I +L+DL + G+T
Sbjct: 840 LEKLTAK-IQQYCYLLNDLSPDLLGNT--------------------------------- 865
Query: 750 IRRKSSSLKRWLAICSD--DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
CSD +L R R L+K DI+ +++E+
Sbjct: 866 --------------CSDYEELRNYLRLRGREAYLQKR--DIVEQQAAGLMKEA------- 902
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ R
Sbjct: 903 ---ERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIR 959
Query: 868 RLTVESLVQY 877
R + S+ Q+
Sbjct: 960 RNVIYSVYQF 969
>gi|427706133|ref|YP_007048510.1| protein translocase subunit secA [Nostoc sp. PCC 7107]
gi|427358638|gb|AFY41360.1| protein translocase subunit secA [Nostoc sp. PCC 7107]
Length = 931
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 370/918 (40%), Positives = 501/918 (54%), Gaps = 111/918 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 77 LRHFDVQMLGGIILHTGQIAEMKTGEGKTLVATLPSYLNALSGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSTMNPSERQKNYECDITYVTNSEVGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y A ++A L + HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYLQAEEIAFTLKKEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A AE L DL+D DPWA FV NALKAKE + +DV YIVRNG+ +I+
Sbjct: 254 ARNVLLTDEGFAEAEELLGVTDLFDPEDPWAHFVFNALKAKELFLKDVNYIVRNGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R DL F T GKW+ +E M LGRPVLVG+
Sbjct: 374 EEAEFEKIYKLEVSIIPTNRIRRRQDLSDLVFKTEAGKWQAIARECAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS+LLKQ GIPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSNLLKQAGIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + + + E +D + + G +
Sbjct: 494 LGGNSEYMARLKLREYFMPRIVQP----EDEDVFGIQRASGSMPTGHGGGQGFTPGKKVK 549
Query: 458 KYVGKAE-GKSWTYQEAKSFFSESVEMS----QSMNLKELQKLIDKQSAMYPLGPTVAL- 511
+ E + +E + E+V+ + +L EL+ DK + PT
Sbjct: 550 TWKASPEIFPTQLSKETEKLLKEAVDFAVREYGDRSLPELEAE-DKVAVAAEKAPTTDAV 608
Query: 512 ------TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
Y V + E +E + V +GGLHVIGT HESRRIDNQLRGRAGRQGDPG
Sbjct: 609 IQRLREAYNRVKHEYEEFTDSEHNNVIEIGGLHVIGTERHESRRIDNQLRGRAGRQGDPG 668
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
STRF +SL+D + + F D L++ +EDMPIE + R L G Q E YY+
Sbjct: 669 STRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSLEGAQKKVETYYYD 726
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRK Q+F+Y DE++ +
Sbjct: 727 IRK---------------------------------QVFEY-----DEVMNNQRRAIYAE 748
Query: 686 RYWSLD--KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKP 743
R L+ L ++ I A K +DD+ ++ + DLP
Sbjct: 749 RRRVLEGQDLKEQVIKYAEKTMDDI-----------------------VDYYINADLPSE 785
Query: 744 PNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD 803
+ K +K ++ + SD + T + + IA + Q +
Sbjct: 786 EWELEKLVEK---VKEFVYLLSDMQASQLEDMSVTEIKAFLHEQVRIAYDMKEAQIDQVQ 842
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK +G F+ M+
Sbjct: 843 PGLMRQAERFFILQRIDTLWREHLQQMDALRESVGLRGYGQKDPLIEYKSEGYELFLDMM 902
Query: 864 SATRRLTVESLVQYWSSP 881
RR V SL + P
Sbjct: 903 VNIRRDVVYSLFMFQPQP 920
>gi|427713598|ref|YP_007062222.1| protein translocase subunit secA [Synechococcus sp. PCC 6312]
gi|427377727|gb|AFY61679.1| protein translocase subunit secA [Synechococcus sp. PCC 6312]
Length = 929
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 336/759 (44%), Positives = 458/759 (60%), Gaps = 69/759 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG +LHDG IAEMKT ++TVNDYLA+RDA
Sbjct: 77 LRHFDVQLIGGMILHDGQIAEMKTGEGKTLVSTLPAYLNALTGKGVHIITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ+ M P+ER+ +Y CDITY NSE+GFDYLRDN+A + ++V
Sbjct: 137 EWMGQVHRFLGLTVGLIQQQMPPQERQKSYACDITYATNSEIGFDYLRDNMATSMAEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PFHF ++DEVDSVLIDE R PL+ISG+ + +Y A+++A L +HY V+ K
Sbjct: 197 R---PFHFCVIDEVDSVLIDEARTPLIISGQVERPTEKYLKASEIARSLNAEVHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +T+EG AE L +DL+D DPWA ++ NA+KAKE + +DV YI+R + +I+
Sbjct: 254 ARNVLMTDEGFIEAEKLLGVDDLFDPEDPWAHYIFNAIKAKELFIKDVNYIIRGEEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ +S +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKERVEIQNESQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++++ V VPTN + R D+ + T KW+ QE M GRPVLVG+
Sbjct: 374 EEAELEKIYKLEVTVVPTNRTSSRRDISDVVYKTEMAKWQAVAQECAEMHSAGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL+QQGIPHN+LNA+P+ RE+E +AQAGRK A+TISTNMAGRGTDII
Sbjct: 434 TSVEKSEILSVLLQQQGIPHNLLNAKPENVERESEIIAQAGRKGAVTISTNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + R + E DD S ++ + G K
Sbjct: 494 LGGNAEYMARLKVRE---FFMPRIVMP-ESDDPMSLLSLMGNHRQGGQGFGQEVKQ---- 545
Query: 458 KYVGKAEGKSWTY----------QEAKSFFSESVEMS----QSMNLKELQK------LID 497
KSW ++A++ +V+ + +L ELQ +
Sbjct: 546 --------KSWKVSTEIFPTEISKDAEALIRAAVDFAVKEYGERSLPELQAEDMIAVAAE 597
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K P+ + Y + ++ E E EV LGGLHVIGT HESRRIDNQLRGR
Sbjct: 598 KAPTQDPVIQKLREAYNQIRREYEAFTGREHQEVVELGGLHVIGTERHESRRIDNQLRGR 657
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + L Q
Sbjct: 658 AGRQGDPGSTRFFLSLEDNLLRIFGGDR--VASLMNAFRVEEDMPIESRILTGSLENAQK 715
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ IRK + E+DEV+ QR+ +Y R+ +L G E ++ +Y + +D+I+
Sbjct: 716 KVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--EDLKDRVLEYAEKTMDDIVVA 773
Query: 678 NVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGIS 713
V+P W L L ++EF+ + + + A +S
Sbjct: 774 YVNPELPAEEWDLASLVSKVQEFVYLLADLEPEHLANLS 812
>gi|260434761|ref|ZP_05788731.1| preprotein translocase, SecA subunit [Synechococcus sp. WH 8109]
gi|260412635|gb|EEX05931.1| preprotein translocase, SecA subunit [Synechococcus sp. WH 8109]
Length = 936
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 350/766 (45%), Positives = 458/766 (59%), Gaps = 56/766 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M PEERR NYRCDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMRPEERRRNYRCDITYATNSELGFDYLRDNMAADMSEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA LV+
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAAQVANALVRAAELGKDGV 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A +E L DL++ DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFANSEQMLGVADLFNPQDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALSIQPETQTLAAITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETTIVPTNRVRARQDWADQVYKTEAAKWRAVANETVEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ RE+E VAQAGR A+TI+
Sbjct: 441 HNCGRPVLVGTTSVEKSELLSSLLAEQEIPHNLLNAKPENVERESEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L + E D K P + I G +
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLGRLVKP----EEDHKPPVP-LQRSIPAGFTD 555
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSAMYP 504
+L A A T Q + V+ +++ + EL++ I + P
Sbjct: 556 APVLVSTASRDSLYPCALTDD-TDQALGQLARDLVKAWGDRALTVIELEERIATAAEKAP 614
Query: 505 L-GPTVALTYLSVLK---DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
P + L++ + + + E + V+ GGLHVIGT HESRR+DNQLRGRAGR
Sbjct: 615 TDDPQIQALRLAIARVKGEYDAVVKQEEARVRDAGGLHVIGTERHESRRVDNQLRGRAGR 674
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGSTRF +SL D + + F D L++ +EDMPIE + R L G Q E
Sbjct: 675 QGDPGSTRFFLSLGDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQKKVE 732
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
YY+ IRK + E+DEV+ QR+ VY R+ +L G + +Q+ Y + +DEI+ V+
Sbjct: 733 TYYYDIRKQVFEYDEVMNNQRRAVYSERRRVLDG--RALKKQVIDYGERTMDEIVEAYVN 790
Query: 681 PLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
P P W L++L +KEFI + + D G+ D L +E
Sbjct: 791 PDLPPEEWDLNQLVGKVKEFIYLLEDLNPDHVQGLGMDELKAFFQE 836
>gi|411118672|ref|ZP_11391052.1| protein translocase subunit secA [Oscillatoriales cyanobacterium
JSC-12]
gi|410710535|gb|EKQ68042.1| protein translocase subunit secA [Oscillatoriales cyanobacterium
JSC-12]
Length = 930
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 352/769 (45%), Positives = 465/769 (60%), Gaps = 73/769 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG +LH+G IAEM+T VVTVNDYLA+RDA
Sbjct: 77 MRHFDVQILGGMILHEGQIAEMRTGEGKTLVATLPAYLNALSGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A + +V
Sbjct: 137 EWMGQVHRFLGLTVGLIQQNMTPAERKKNYDCDITYGTNSELGFDYLRDNMATSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA++A L + HY V+ K
Sbjct: 197 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPSEKYVRAAEIARALDKDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+EG AE L DL+D DPWA +V NA+KAKE + DV YIVR G+ +I+
Sbjct: 254 QRTILLTDEGFIRAEELLGVADLFDPKDPWAHYVFNAIKAKELFILDVNYIVRGGEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKEGVEIQPETQTLATITYQNFFLLYPKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V +PTN NIR DL + T KW+ E M GRPVLVG+
Sbjct: 374 EEAEFGKIYNLEVTTIPTNRTNIRRDLSDVVYKTEEAKWKAIAFECAQMHEEGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL + IPHN+LNA+P+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLAELKIPHNLLNAKPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + R P+ E + + A +K
Sbjct: 494 LGGNADYMARLKVREYFMPKIVR-------------PEDEDEFGVTDVAAAHSSKGGGQG 540
Query: 458 KYVGKAEGKSW--------------TYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMY 503
GK + K+W T +E K +V+ +L EL+ DK +
Sbjct: 541 FVPGK-KVKTWKASPQIFPTQLSKETEKELKEAVDFAVKEYGERSLSELEAE-DKVAVAS 598
Query: 504 PLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
PT + Y + ++ EV+ S E EV LGGLHVIGT HESRRIDNQLRG
Sbjct: 599 EKAPTDDPVIQKLRAVYNRIREEYEVYTSAEHDEVVYLGGLHVIGTERHESRRIDNQLRG 658
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RA RQGDPGST+F +SLQD + + F D L++ +EDMPIE + R L G Q
Sbjct: 659 RAARQGDPGSTKFFLSLQDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQ 716
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E YY+ IRK + E+DEV+ QR+ +Y R+ +L G E +Q+ +Y + +D+I+
Sbjct: 717 KKVETYYYDIRKQVFEYDEVMNKQRRAIYAERRRVLEG--EDLKEQVIKYAEQTMDDIVN 774
Query: 677 GNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIE 722
++P P W L+KL +KEF+ +L+DL GD + I+
Sbjct: 775 AFINPELPPEEWELEKLVGKVKEFVY----LLEDLEPKQLGDMSVSEIK 819
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 797 VQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
V+E++ D + M++ ER +++ +D WR+HL M+ L +V +R +G ++PL EYK
Sbjct: 832 VKEAQIDQIQPGLMRQAERFFILQQIDTLWREHLQQMDSLRESVGLRGYGQKDPLIEYKS 891
Query: 854 DGCRFFISMLSATRRLTVESLVQY 877
+G F+ M++ RR V SL Q+
Sbjct: 892 EGFELFLEMMTDIRRNVVYSLFQF 915
>gi|87301640|ref|ZP_01084480.1| preprotein translocase, SecA subunit [Synechococcus sp. WH 5701]
gi|87283857|gb|EAQ75811.1| preprotein translocase, SecA subunit [Synechococcus sp. WH 5701]
Length = 951
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 345/763 (45%), Positives = 457/763 (59%), Gaps = 55/763 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLVGGMVLHEGQIAEMKTGEGKTLVATLPAYLNALTGAGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P +RR NY CDITY NSELGFDYLRDN+A + E++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMAPPDRRRNYACDITYATNSELGFDYLRDNMANDIEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL--VQGL----- 150
R FH+ I+DEVDS+L+DE R PL+ISG+ + +Y AA++A L +G+
Sbjct: 204 RQ---FHYCIIDEVDSILVDEARTPLIISGQVERPQEKYMRAAEIAAALERAEGMAKDGI 260
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K +V LT+EG A AE L DL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRNVTLTDEGYAKAEAMLGVLDLFDPADPWAHYITNALKAKEMFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRGADAVIVDEFTGRVMPGRRWSDGQHQAIEAKEMLPIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN P R DL Q + KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLEVTVVPTNRPRSRQDLVDQVYKNEAAKWRAVALETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R RPVLVG+TSVE SE LS LL QQGIPHN+LNA+P+ REAE +AQAGR A+TI+
Sbjct: 441 HRASRPVLVGTTSVEKSELLSGLLTQQGIPHNLLNAKPENVEREAEIIAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L R E P+ + G S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRP--EDEHQPPVPLPRQTAAAGFGQDS 558
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM-----SQSMNLKELQKLI----D 497
A A A+ +G + + + + + E+ +++ + EL+ I +
Sbjct: 559 SAAPLMAPSEARAIGGLYPCTLSEESERELAHLARELVKVWGDRALTVLELEDRIAQAAE 618
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K A P + T V + + E +V++ GGLHVIGT HESRR+DNQLRGR
Sbjct: 619 KAPAEDPQIQQLRRTIARVRAEYDAVVKQEEDQVRQAGGLHVIGTERHESRRVDNQLRGR 678
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 679 AGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQK 736
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ IRK + E+DEV+ QRK VY R+ +L G Q+ Y + + +I+
Sbjct: 737 KVETYYYDIRKQVFEYDEVMNNQRKAVYAERRRVLEG--RELKLQVIGYGERTMSDIVEA 794
Query: 678 NVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTL 717
V+P P W L +L ++EF+ + + + +G++ + L
Sbjct: 795 YVNPDLPPEEWDLGQLVAKVQEFVYLLEDLTPEQLSGLNTEEL 837
>gi|1256593|gb|AAA96399.1| SecA, partial [Synechocystis sp. PCC 6803]
Length = 777
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 333/717 (46%), Positives = 443/717 (61%), Gaps = 69/717 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIILHKGQIAEMKTGEGKTLVATLPSYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL+VGL+Q GM PEER+ NY CDITYT NSELGFDYLRDN++ ++V
Sbjct: 144 EWMGQIHRFLGLTVGLVQSGMNPEERKKNYACDITYTTNSELGFDYLRDNMSTAMIEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+LIDE R PL+ISG+ + +Y A+ +A L +HY V+ K
Sbjct: 204 R---PFNFCIIDEVDSILIDEARTPLIISGQVERPTEKYLQASDIAAQLEPEIHYEVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +T+EG AE L+T DL+D+NDPWA ++ NA+KAKE + +DV YIVRNG+ +I+
Sbjct: 261 QRNVLMTDEGFEKAEQLLQTTDLFDKNDPWAHYIFNAIKAKELFLKDVNYIVRNGEVVIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQA+EAKE ++IQ +S +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 321 DEFTGRIMVGRRWSDGLHQAIEAKERVEIQKESQTLATITYQNFFLLYPKLSGMTGTAKT 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + V PTN P+ R D P + KW+ E E + + GRP+LVG+
Sbjct: 381 EETELEKVYNLQVTITPTNRPSSRQDWPDVVYKNEEAKWKAVALECEELHQQGRPILVGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE +S LL+ GI HN+LNARP+ RE+E VAQAGRK A+TI+TNMAGRGTDII
Sbjct: 441 TSVEKSEVISRLLQSSGIHHNLLNARPENVERESEIVAQAGRKGAVTIATNMAGRGTDII 500
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA---KAA 454
LGGN +A+ + + L+ + R DD +LG+ ++ K
Sbjct: 501 LGGNSDYMARLKVREYLMPKIVRPE-----DD-----------ELGAGVTGWVSGREKPQ 544
Query: 455 LLAKYVGKAEGKSWTY----------QEAKSFFSESVEMS-QSMNLKELQKL--IDKQSA 501
GK + K+W QE + ++V+ + L+ L +L DK +
Sbjct: 545 GFGNQNGKKKVKTWQVSPDIYPTTISQETEDLLKKAVKFAVDQYGLQSLTELEAEDKLAI 604
Query: 502 MYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
GPT + Y + ++ EV S E EV LGGLHVIGT HESRR+DNQL
Sbjct: 605 ASEKGPTDDPVILKLREVYNQIRREYEVLTSAEHKEVVELGGLHVIGTERHESRRVDNQL 664
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + L G
Sbjct: 665 RGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNMFRVEEDMPIESKMLTGSLEG 722
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
Q E YY+ IRK + E+DEV+ QRK +Y R+ +L G + +Q+ Y + +
Sbjct: 723 AQKKVETYYYDIRKQVFEYDEVMNNQRKAIYAERRRVLEGLD--LKEQVLVYAEKTM 777
>gi|119511252|ref|ZP_01630368.1| translocase [Nodularia spumigena CCY9414]
gi|119464130|gb|EAW45051.1| translocase [Nodularia spumigena CCY9414]
Length = 930
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 339/751 (45%), Positives = 454/751 (60%), Gaps = 81/751 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQMLGGVILHSGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ MIP ER+ NY CDITY NSE+GFDYLRDN++ + +V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSSMIPSERQKNYACDITYVTNSEIGFDYLRDNMSTSMADVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+L+DE R PL+ISG+ + +Y AA++A L HY V+ K
Sbjct: 197 R---PFNYCVIDEVDSILVDEARTPLIISGQVERPTEKYLQAAEIASRLQVDEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG A +E L DL+D DPWA F+ NA+KAKE + +D YIV N + +I+
Sbjct: 254 ARNVLLTDEGFAESENLLGVTDLFDPEDPWAHFMFNAIKAKELFLKDKHYIVGNKEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVDIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V +PTN R D P F T GKW E M LGRPVLVG+
Sbjct: 374 EEPEFEKIYKLEVAVIPTNRVRRRQDWPDMVFKTEPGKWRAIAGECAEMHELGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LLKQ IPH +LNARP+ REAE VAQAGR+ A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEYLSQLLKQMEIPHELLNARPENVEREAEIVAQAGRRGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + + P++ ++ + + +AA L
Sbjct: 494 LGGNSEYMARLKLREYFM------------------PRI---VRPEDEDVFGVQRAAGLP 532
Query: 458 KYVGKAEG-------KSWT----------YQEAKSFFSESVEMS------QSMNLKELQK 494
G +G K+W +E + ++VE++ +S+ E +
Sbjct: 533 TGHGGGQGFVPGKKVKTWRASPEIFPTELTKETEQLLKDAVEVAVREYGDRSLPELEAED 592
Query: 495 LIDKQSAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
+ + P+ V L Y V ++ E +E +EV LGGLHVIGT HESRRI
Sbjct: 593 KVAVAAEKAPIDDPVILRLREAYNRVKEEYEQFTESEHNEVIELGGLHVIGTERHESRRI 652
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R
Sbjct: 653 DNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTR 710
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y +
Sbjct: 711 SLEGAQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYAEKT 768
Query: 671 VDEIIFGNVDPLKHPRYWSLDKL---LKEFI 698
+DEI+ ++P W L KL +KEF+
Sbjct: 769 MDEIVDFYINPDLPSEEWELQKLVDKVKEFV 799
>gi|15234320|ref|NP_192089.1| preprotein translocase subunit secA [Arabidopsis thaliana]
gi|322510072|sp|Q9SYI0.2|SECA1_ARATH RecName: Full=Protein translocase subunit SECA1, chloroplastic;
Short=AtcpSecA; AltName: Full=Protein ALBINO OR GLASSY
YELLOW 1; Flags: Precursor
gi|332656678|gb|AEE82078.1| preprotein translocase subunit secA [Arabidopsis thaliana]
Length = 1022
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 366/907 (40%), Positives = 502/907 (55%), Gaps = 113/907 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 155 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 214
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+R+ NY CDITY NSELGFDYLRDNLA + E+LV+
Sbjct: 215 EWVGQVPRFLGLKVGLIQQNMTPEQRKENYLCDITYVTNSELGFDYLRDNLATSVEELVL 274
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+A + +HYTV+ K
Sbjct: 275 R---DFNYCVIDEVDSILIDEARTPLIISGPAEKPSDQYYKAAKIASAFERDIHYTVDEK 331
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G AE L+ DL+D + WA +V+NA+KAKE + RDV YI+R + LI+
Sbjct: 332 QKTVLLTEQGYEDAEEILDVKDLYDPREQWASYVLNAIKAKELFLRDVNYIIRAKEVLIV 391
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ +S+ +A I+YQ+ F +PKL GMTGTA T
Sbjct: 392 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTAST 451
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GR VLVG+
Sbjct: 452 ESAEFESIYKLKVTIVPTNKPMIRKDESDVVFKAVNGKWRAVVVEISRMHKTGRAVLVGT 511
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS LL++ GI H VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 512 TSVEQSDELSQLLREAGITHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 571
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + L+ + + V V K + PK ++ L + A LA
Sbjct: 572 LGGNAEFMARLKLREILMPRVVKPTDGVFVSVKKAPPKRTWKVNEKLFPCKLSNEKAKLA 631
Query: 458 KYVGKAEGKSW-----TYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALT 512
+ ++ ++W T EA+ S S E + ++I K +
Sbjct: 632 EEAVQSAVEAWGQKSLTELEAEERLSYSCEKGPVQD-----EVIGK----------LRTA 676
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+L++ K+ + + E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 677 FLAIAKEYKGYTDEERKKVVEAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLS 736
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D +F+ F D + + R ED+PIE + + L Q E Y+F IRK L E
Sbjct: 737 LEDNIFRIFGGDR---IQGMMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFE 793
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
FDEVL QR VY R+ L SL+
Sbjct: 794 FDEVLNSQRDRVYTERRRALVSD---------------------------------SLEP 820
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
L+ E+ + +DD+ G PD PK F +
Sbjct: 821 LIIEYAELT---MDDILEANIG-----------------------PDTPKESWDFEKLIA 854
Query: 753 KSSSLKRWLAICSDDLTKN--GRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEV 810
K L + DL K+ Y + LR D + V ++S MK+
Sbjct: 855 KVQQYCYLLNDLTPDLLKSEGSSYEGLQDYLRARGRDAYLQKREIVEKQS---PGLMKDA 911
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 912 ERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNV 971
Query: 871 VESLVQY 877
+ S+ Q+
Sbjct: 972 IYSIYQF 978
>gi|428216497|ref|YP_007100962.1| protein translocase subunit secA [Pseudanabaena sp. PCC 7367]
gi|427988279|gb|AFY68534.1| protein translocase subunit secA [Pseudanabaena sp. PCC 7367]
Length = 932
Score = 610 bits (1573), Expect = e-171, Method: Compositional matrix adjust.
Identities = 336/761 (44%), Positives = 464/761 (60%), Gaps = 74/761 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH G IAEM+T +VTVNDYLA+RDA
Sbjct: 79 MRHYDVQLIGGMVLHKGEIAEMRTGEGKTLVSTLPSYLNAVSGKGVHIVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRF+GLSVGLIQ+GM P ER+ NY CDITY NSELGFDYLRDN+A + +V
Sbjct: 139 EWMGQIHRFMGLSVGLIQQGMDPAERQRNYACDITYATNSELGFDYLRDNMATAMQDVVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDSVLIDE R PL+ISG+ + +Y AA++A+ L HY V+ K
Sbjct: 199 R---PFNYCVIDEVDSVLIDEARTPLIISGQVERPTEKYIGAAEIAKQLEAEKHYEVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ +V LT+EG +E L DL+D++DPWA +V NA+KAKE +++DV YIVR+G+ I+
Sbjct: 256 DRNVILTDEGFEESEQLLGVTDLYDQDDPWAHYVFNAIKAKELFKKDVNYIVRDGEVTIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKEG KI+ ++ +A ITYQ+ F LYPKL+GMTGTAKT
Sbjct: 316 DEFTGRVMPGRRWSDGLHQAIEAKEGAKIENETQTLASITYQNFFLLYPKLAGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + V + TN P RVD+ + T KW + M+ LGRPVLVG+
Sbjct: 376 EEAELGKIYNLEVTAIDTNRPTRRVDIADAVYKTEAAKWRAVAGNCQEMYELGRPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL+Q IPHN+LNA+P+ REAE VAQAGRK ++TI+TNMAGRGTDII
Sbjct: 436 TSVEKSEVLSRLLQQAEIPHNLLNAKPENVEREAEIVAQAGRKGSVTIATNMAGRGTDII 495
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +A+ + + + + R P+ S + G ++ +
Sbjct: 496 LGGNADYMARLKMREYFMPQIVR-------------PEDDSLMARGRGAMPTRQQGG--Q 540
Query: 458 KYVGKAE-GKSWTY-----------QEAKSFFSESVEM------SQSMNLKELQKLIDKQ 499
+ G+AE KSW E+K+ +V + SQS+ E ++++
Sbjct: 541 GFSGEAEPKKSWKAATDRLFPTELSDESKNTLKAAVNLGVETLGSQSITELEAEEMLAIA 600
Query: 500 SAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
S P+ V + + + K+ + E EV LGGLHVIGT HESRRIDNQLR
Sbjct: 601 SEKGPIDDPVVIKLREAFNLIRKEYSNYTDAEHDEVIELGGLHVIGTERHESRRIDNQLR 660
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GR GRQGDPGST F +SL+D + + F+ D A L++ +ED+PI + R L
Sbjct: 661 GRCGRQGDPGSTLFFLSLEDNLMRIFAGDRVKA--LMNAFRVEEDLPISSGLLTRSLETA 718
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E +Y+ +RK + E+DEV+ QR+ +Y R+ +L G E ++ +Y + +D+I+
Sbjct: 719 QKKVETHYYDMRKRVFEYDEVMNNQRRAIYAERRRVLEG--EDLRGRVIEYAERTMDDIV 776
Query: 676 FGNVDPLKHPRYW---SLDKLLKEFIAIAGKI----LDDLF 709
V+P P W S+ +KEF+ + + LDD+F
Sbjct: 777 EAYVNPDLPPEEWDITSMTNKVKEFVNLLQDLEPEHLDDMF 817
>gi|434399682|ref|YP_007133686.1| Protein translocase subunit secA [Stanieria cyanosphaera PCC 7437]
gi|428270779|gb|AFZ36720.1| Protein translocase subunit secA [Stanieria cyanosphaera PCC 7437]
Length = 934
Score = 610 bits (1573), Expect = e-171, Method: Compositional matrix adjust.
Identities = 367/933 (39%), Positives = 516/933 (55%), Gaps = 153/933 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHYDVQLLGGIVLHKGQIAEMKTGEGKTLVCTLPAYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGLSVGLIQ GM ERR NY CDITYT NSELGFDYLRDN+A + E++V
Sbjct: 144 EWMGQIHRFLGLSVGLIQSGMSSGERRKNYACDITYTTNSELGFDYLRDNMATSMEEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ------GLH 151
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA+VA LLV+ G
Sbjct: 204 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPTEKYLKAAEVARLLVKQEEEQGGGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T++G A AE L DL+D+ +PWA ++ NA+KAKE + +DV Y+VRN
Sbjct: 261 YEVDEKARNVLMTDDGFAKAEEILGVKDLYDQENPWAHYIFNAIKAKELFTKDVNYMVRN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKL+GM
Sbjct: 321 DEIVIVDEFTGRVLPGRRWSDGLHQAIEAKEAVEIQNETQTLASITYQNFFLLYPKLAGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN + R DL + KW +E M LGR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIIPTNRTSQRRDLADVVYKNEMAKWTAVAEECAEMHELGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS LL+Q+ IP+N+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSELLSSLLRQKEIPYNLLNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDIILGGN +A+ I + L+ + R DD E+ ++
Sbjct: 501 RGTDIILGGNADYMARLKIREYLMPKIVRPE-----DD---------ELAFQTNGFGGRK 546
Query: 452 KAALLAKYVGKAEG-KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLG---- 506
A G A G K T++ + F + LK++ K +Q L
Sbjct: 547 PAQ------GFAPGQKVKTWKASPQIFPTELSKETETMLKDVVKFAVQQYGEQSLAELEA 600
Query: 507 ---------------PTVAL---TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
P + Y + K+ + E ++V LGGLHVIGT HESR
Sbjct: 601 EEKIAIAAENAPVDDPVIEQLRQVYKQIRKEYDQFTDQEHNDVVSLGGLHVIGTERHESR 660
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITN----DEDMPIE 604
RIDNQLRGRAGRQGDPGST+F +SL+D + + F D +SR+ + +EDMPIE
Sbjct: 661 RIDNQLRGRAGRQGDPGSTKFFLSLEDNLLRIFGGDR------VSRLMDMFRVEEDMPIE 714
Query: 605 GDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIF 664
+ L Q E +Y+ RK + E+DEV+ QR+ +Y R+ +L G +
Sbjct: 715 SKMLTGSLENAQKKVETFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD-------- 766
Query: 665 QYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEEL 724
L ++ I A K +D++
Sbjct: 767 ----------------------------LKEQVIQYAEKTMDEI---------------- 782
Query: 725 PELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKY 784
++ + P+LP P + + + + +K ++ + D L T ++ +
Sbjct: 783 -------VDAYINPELP--PEEW-NLDKMVAKVKEFIYLLQD-LEPTDLEDMTVGEIKTF 831
Query: 785 LGDILIASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRS 841
L + + +Y ++E++ + V M++ ER +++ +D WR+HL M+ L ++ +R
Sbjct: 832 LHEEVRKAY--DIKENQIESVQPGLMRQAERFFILQQIDTLWREHLQAMDALRESIGLRG 889
Query: 842 FGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+G ++PL EYK +G F+ M+ RR V SL
Sbjct: 890 YGQKDPLIEYKQEGYEMFLEMMIDIRRNVVYSL 922
>gi|357442059|ref|XP_003591307.1| Protein translocase subunit secA [Medicago truncatula]
gi|355480355|gb|AES61558.1| Protein translocase subunit secA [Medicago truncatula]
Length = 1011
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 371/908 (40%), Positives = 510/908 (56%), Gaps = 117/908 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 146 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRDC 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLG+ VGLIQ+ M E+R+ NY CDITY NSELGFD+LRDNL+ E+LV+
Sbjct: 206 EWVGQVPRFLGMKVGLIQQNMTSEQRKENYLCDITYVTNSELGFDFLRDNLSV--EELVI 263
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+AE + +HYTV+ K
Sbjct: 264 RG---FNYCVIDEVDSILIDEARTPLIISGPAEKPSDKYYKAAKIAEAFERDIHYTVDEK 320
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV ++E+G AE L DL+D + WA FV+NA+KAKE + RDV YI+R + LI+
Sbjct: 321 QKSVLISEQGYEDAEEILAVKDLYDPREQWASFVLNAIKAKELFLRDVNYIIRGKEVLIV 380
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 381 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAST 440
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F RGKW E+ M + GRPVLVG+
Sbjct: 441 EITEFESIYKLKVTIVPTNKPMIRKDESDVVFRATRGKWRAVVVEISRMHKTGRPVLVGT 500
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS+ LK+ GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 501 TSVEQSDSLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 560
Query: 398 LGGNPKMLA----KKIIEDRLLLLLTREALNVEVDDKTSSPKV---LSEIKLGSSSLALL 450
LGGN + +A ++I+ R++ L + ++V+ + KV L +L + + L
Sbjct: 561 LGGNAEFMARLKLREILMPRVVKLTEGDFVSVKKPPPAKTWKVNDKLFPCQLSNKNTELA 620
Query: 451 AKAALLAKYVGKAEGK-SWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
+A LA KA GK S T EA+ S S E K A + +
Sbjct: 621 EEAVQLAV---KAWGKRSLTELEAEERLSYSCE---------------KGPAQDEVIAAL 662
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L + K+ ++ E +V GGL V+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 663 RNAFLEISKEYKIFTEEERKKVVAAGGLIVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 722
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + R+ ED+PIE + + L Q E Y+F IRK
Sbjct: 723 FLSLEDNIFRIFGGDRIQGLMKAFRV---EDLPIESQMLTKALDEAQKKVENYFFDIRKQ 779
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L E+DEVL QR VY R+ L N + +Y + +D+I+ N+ W
Sbjct: 780 LFEYDEVLNSQRDRVYTERRRALQSDN--LQSLLIEYAELTIDDILEANIGSDAPKDSWD 837
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
LDKL+ + I +L+DL P+L R
Sbjct: 838 LDKLIAK-IQQYCYLLNDL----------------------------------TPDLLRN 862
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
L+ +L R R L+K DI +++E+
Sbjct: 863 ECPDYEGLRSYL-----------RLRGKEAYLQKR--DITEQQAPGLMKEA--------- 900
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 901 -ERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRN 959
Query: 870 TVESLVQY 877
+ S+ Q+
Sbjct: 960 VIYSIYQF 967
>gi|412992916|emb|CCO16449.1| preprotein translocase subunit SecA [Bathycoccus prasinos]
Length = 1306
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 383/1006 (38%), Positives = 551/1006 (54%), Gaps = 154/1006 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GGA+LH G +AEM T +VTVNDYLA+RDA
Sbjct: 213 LRHFDVQLVGGALLHKGVVAEMATGEGKTLVATLPAYLNALSRRGVHIVTVNDYLAERDA 272
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
++H LGL+VG + PEERR +Y CDITY N E+GFDYLRDN+A + ++LV+
Sbjct: 273 LTTAKIHGALGLTVGYVLSEDSPEERRKSYDCDITYVTNQEIGFDYLRDNMATSVDELVV 332
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVA-RYPVAAKVAELLVQGLHYTVEL 156
+P +FAIVDEVDSVLIDEGRNPLLI+G + D RY AAK+AE LV+G Y +
Sbjct: 333 -MTRPLNFAIVDEVDSVLIDEGRNPLLITGPSDMDEGPRYVAAAKIAESLVEGRDYKADR 391
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K ++E+T+EG+ AE+ L+ DLWD DPW ++V+ A+KAK + RDV YIVR+ + +I
Sbjct: 392 KEKTIEMTDEGMTNAEILLDVEDLWDPVDPWGKYVILAVKAKALFIRDVDYIVRDDQVII 451
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ TGRV+ RRW++ +HQAVEAKE ++I +++ ++A ++YQ FKLY KLSGMTGTA
Sbjct: 452 VDPGTGRVQMNRRWNDNLHQAVEAKEKVEIHSENAIIASVSYQCFFKLYKKLSGMTGTAT 511
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF ++ + VI VP + PN RVD P F A +W V S GRPVLVG
Sbjct: 512 TEAEEFEIIYNLRVIVVPKHRPNARVDAPTAMFRDAMTRWNAVANVVVSCHYEGRPVLVG 571
Query: 337 STSVENSEYLSDLLKQ-----------QGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
+TSVE+SE LS +L + +G+ HN+LNARP+YAAREAET+AQAGR A+TI
Sbjct: 572 TTSVEDSETLSMVLDEYLWRAPDDTVVKGVAHNLLNARPQYAAREAETIAQAGRLGAVTI 631
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALN----VEVDDKTSSPKV---LS 438
+TNMAGRGTDI+LGGN + LA+K +++ L EAL +E + +T+ V L+
Sbjct: 632 ATNMAGRGTDILLGGNAEGLARKAMKEHLF-----EALGLGDVLEEERETAFQSVSESLA 686
Query: 439 EIKLGSSSLAL-LAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK--- 494
+ L + + L +A L+AK ++ G A SVE + +E QK
Sbjct: 687 TVNLSETPAQIALEQARLIAKAACESAG-PMNIDSANEMLVRSVEKAGEKIRREEQKKQR 745
Query: 495 ---------------------LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKR 533
+K+ P + L++ C E EV R
Sbjct: 746 LLLTGWEAQGINTNEDDDEEINDEKEKKRVPFEIAIDFAAEQTLRETARLCKLESQEVIR 805
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLIS 593
GGL V+GT+LHESRRID QLRGRAGRQGDPGST F +SL DEM + +S S
Sbjct: 806 RGGLQVVGTALHESRRIDRQLRGRAGRQGDPGSTVFCLSLDDEMIRTYSPAMSKQSSAWD 865
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
+ P+ G + QL G+Q + E Y R+S + D VL+ QR VY+LR+ +L
Sbjct: 866 FAGLAPEEPMYGSLVDIQLEGIQKNIEDYLSAGRQSTFDADRVLDSQRNAVYELRRMVLV 925
Query: 654 GANESCSQQIFQYMQAVVDE-IIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGI 712
G ++ +++F+Y+ A+VD + NV + W+++ L+ +L ++FAG
Sbjct: 926 GGQQTLRERLFRYVDAIVDNYCVAANVSGSTPAKDWNVELLM--------DLLREVFAGR 977
Query: 713 SGDTLLKSIEE-------LPELNSIDINN--FYFPD------LPKP-------------- 743
L + E LP +++ D+ + + D LP+P
Sbjct: 978 KDRFRLTNNEPVSPHPHYLPGVSAADLKDALLHLDDKNGSRTLPEPRRMPPLDANPVAVR 1037
Query: 744 -------------PNLFRGIRRKSSS------------------LKRWL-----AICSDD 767
L G+ + SS LK+ L S D
Sbjct: 1038 ASISGVNLAYADGSGLAGGLEKTDSSGSVADTEPEAEEDAISERLKKRLEPPKEESSSKD 1097
Query: 768 LTK---NGRYRATTNLLRKYLGDILIASYLN-VVQESRYDDVY--MKEVERAVLVKTLDC 821
+ K +GR+ LR YL + I YL+ + +R D + +++VER +++ +D
Sbjct: 1098 VVKAFSSGRHAKKARQLRAYLSEAAIQQYLDRFARLARLDYIREELEDVERLWVLRAIDE 1157
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
++ HL++M+ L +V VR+FGH +P EE+KIDG + F+ +S R
Sbjct: 1158 RYKQHLVHMSSLKDSVQVRAFGHLDPKEEFKIDGAKAFVDCVSDMR 1203
>gi|87123256|ref|ZP_01079107.1| preprotein translocase, SecA subunit [Synechococcus sp. RS9917]
gi|86168976|gb|EAQ70232.1| preprotein translocase, SecA subunit [Synechococcus sp. RS9917]
Length = 955
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 348/771 (45%), Positives = 460/771 (59%), Gaps = 55/771 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSFLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMTPTERRRNYGCDITYATNSELGFDYLRDNMATDISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGL 150
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA + AE+ G+
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAAQVAAALERAAEMGKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L +DL+D DPWA ++ NALKAKE + RDV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQLLGVSDLYDPQDPWAHYITNALKAKELFIRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKEGL +Q ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLAVQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN P R DL Q + T + KW +E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETTIVPTNRPRARQDLADQVYKTEQAKWRAVARETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRQGRPVLVGTTSVEKSELLSALLAEEAIPHNLLNAKPENVEREAEIVAQAGRSGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR--EALNVEVDDKTSSPKVLSEIKLGS 444
TNMAGRGTDIILGGN +A+ + + LL L R E V + S+ +
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRPEEGHRPPVPLQRSAEGGGGFAAKAA 560
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQ--KLIDKQSAM 502
+ A AK +G + ++ + ++ ++ + L +L D+ +
Sbjct: 561 PASGPHGHAPSEAKAIGSLYPCQLSDDTDQALADLARDLVKAWGDRALSVIELEDRIATA 620
Query: 503 YPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
PT + V + +V E + V+ GGLHVIGT HESRR+DNQLR
Sbjct: 621 AEKAPTEDEAIAALRAAIARVKAEYDVVVKQEEARVREAGGLHVIGTERHESRRVDNQLR 680
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GRAGRQGDPGSTRF +SL D + + F D L++ +EDMPIE + R L G
Sbjct: 681 GRAGRQGDPGSTRFFLSLGDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGA 738
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E YY+ IRK + E+DEV+ QRK VY R+ +L G +Q+ Y + ++EI+
Sbjct: 739 QKKVETYYYDIRKQVFEYDEVMNNQRKAVYTERRRVLEG--RELKKQVIGYGERTMNEIV 796
Query: 676 FGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
V+P P W L +L +KEF+ + + + G+S D L ++E
Sbjct: 797 EAYVNPDLPPEEWDLSQLVSKVKEFVYLLEDLEAEQLKGLSLDELKAFLQE 847
>gi|158334267|ref|YP_001515439.1| preprotein translocase subunit SecA [Acaryochloris marina
MBIC11017]
gi|189046153|sp|B0C1V9.1|SECA_ACAM1 RecName: Full=Protein translocase subunit SecA
gi|158304508|gb|ABW26125.1| preprotein translocase, SecA subunit [Acaryochloris marina
MBIC11017]
Length = 929
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 338/757 (44%), Positives = 465/757 (61%), Gaps = 61/757 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LHDG IAEMKT +TVNDYLA+RDA
Sbjct: 77 MRHFDVQLLGGMILHDGQIAEMKTGEGKTLVSTLPAYLNALTGKGVHAITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSE+GFDYLRDN++ + E++V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQSMSPTERKKNYACDITYGTNSEIGFDYLRDNMSTSIEEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++ ++DEVDSVLIDE R PL+ISG+ + +Y A+KVA L HY V+ K
Sbjct: 197 R---PLNYCVIDEVDSVLIDEARTPLIISGQVERPTEKYLDASKVANALQPEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L +DL+D DPWA +V NA+KAKE + DV YIVRN + +I+
Sbjct: 254 ARNVILTDEGFVEAEKILGVSDLFDPEDPWAHYVFNAIKAKELFINDVNYIVRNDEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LY KL+GMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKEKVEIQNETQTLATITYQNLFLLYDKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V VPTN N R D+ + + KW E M+ +GRP+LVG+
Sbjct: 374 EEAEFEKIYKLEVTIVPTNRSNQRQDISDVVYKSEEAKWLAVANECADMYEVGRPILVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL ++ IPHN+LNA+P+ RE+E VAQAGR+ +TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEVLSKLLLERNIPHNLLNAKPENVERESEIVAQAGREGRVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKL---GSSSLALLAKAA 454
LGGN + +A+ + + L+ + V + +P + ++KL GS +
Sbjct: 494 LGGNAEYMARLKVREYLMPRI--------VQPEDDNPLSMMQVKLPEAGSQGFGGDGQQK 545
Query: 455 LLAKYVGKAEGK---SWTYQEAKSFFSESVEMS------QSMNLKELQKLIDKQSAMYPL 505
+ + K + + ++A+S E+V + QS+ + + L+ S P
Sbjct: 546 GMQRKTWKVSPEIFPTTISKDAESLLKEAVNAAVKQYGEQSLPELQAEDLMAVASEKAPT 605
Query: 506 GPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQ 561
V Y +L++ E S E +V GGLHVIGT H+SRRIDNQLRGRAGRQ
Sbjct: 606 DDPVIQKLREVYNLILEEYEAFTSKEHDKVVERGGLHVIGTERHDSRRIDNQLRGRAGRQ 665
Query: 562 GDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEK 621
GDPGSTRF +SLQD + + F D L++ +EDMPIE + L Q E
Sbjct: 666 GDPGSTRFFLSLQDNLLRIFGGDR--VAGLMNAFRVEEDMPIESRILTSSLENAQKKVET 723
Query: 622 YYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP 681
YY+ IRK + E+DEV+ QR+ +Y R+ +L G E +++ +Y + +D+I+ V+P
Sbjct: 724 YYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--EDLKERVIEYAEQTMDDIVEAYVNP 781
Query: 682 LKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGD 715
P W+L++L+ KEF+ +L+DL A D
Sbjct: 782 ELPPEEWNLEQLVDKTKEFVY----LLEDLEASHIAD 814
>gi|317968493|ref|ZP_07969883.1| preprotein translocase subunit SecA [Synechococcus sp. CB0205]
Length = 958
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 349/774 (45%), Positives = 460/774 (59%), Gaps = 64/774 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 96 MRHFDVQLLGGMILHDGQIAEMKTGEGKTLVSTLPSYLNALTGRGVHVVTVNDYLARRDA 155
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P RR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 156 EWMGQVHRFLGLSVGLIQQDMDPSSRRLNYGCDITYATNSELGFDYLRDNMANDIAEVVQ 215
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R FH+ ++DEVDS+LIDE R PL+ISG+ + +Y A++VA LV+
Sbjct: 216 R---DFHYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKASEVAAQLVRAAEMGKDGI 272
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L DL+D DPWA ++ NALKAKE + +DV
Sbjct: 273 DPEGDYEVDEKQRSCTLTDEGYAKAEQLLGVADLFDPQDPWAHYINNALKAKEMFIKDVN 332
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR A+I++E TGRV RRWS+G HQA+EAKEGL IQ ++ +A ITYQ+ F LYP
Sbjct: 333 YIVRGDDAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLPIQPETQTLASITYQNFFLLYP 392
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN R D Q + KW E +
Sbjct: 393 RLAGMTGTAKTEEVEFEKTYKLEVTIVPTNRTRARQDWTDQVYKNETAKWRAVALETAEV 452
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 453 HKQGRPVLVGTTSVEKSELLSTLLAEQQIPHNLLNAKPENVEREAEIVAQAGRTGAVTIA 512
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIK----- 441
TNMAGRGTDIILGGN +A+ + + LL L R +D P L
Sbjct: 513 TNMAGRGTDIILGGNADYMARLKLREVLLPRLVRP------EDGHKPPVPLQRAPEAAPG 566
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQS-----MNLKELQKLI 496
G++S AKA AK +G + T ++ + ++ ++ +++ EL+ I
Sbjct: 567 FGAASATESAKAPSEAKAIGTLYPCTLTDGTDQALSGLAHDLVKAWGDRQLSVLELEDRI 626
Query: 497 DKQSAMYPLGPTVALTYLSVLK----DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDN 552
+ + P L ++K + EV +E S V+ GGLHVIGT HESRR+DN
Sbjct: 627 AQAAEKAPTEDAQILQLREMIKRVRSEFEVVTKSEDSVVREAGGLHVIGTERHESRRVDN 686
Query: 553 QLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQL 612
QLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L
Sbjct: 687 QLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSL 744
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G Q+ Y + +
Sbjct: 745 EGAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYAERRRVLEG--RELKAQVVGYGERTMQ 802
Query: 673 EIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+I+ V+P P W L +L ++EF+ + + + +G+S D L ++E
Sbjct: 803 DIVDAYVNPDLPPEEWDLGRLVAKVQEFVYLLEDLKPEQLSGLSVDELKAFLQE 856
>gi|297809985|ref|XP_002872876.1| protein translocase subunit secA chloroplast precursor [Arabidopsis
lyrata subsp. lyrata]
gi|297318713|gb|EFH49135.1| protein translocase subunit secA chloroplast precursor [Arabidopsis
lyrata subsp. lyrata]
Length = 1022
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 365/907 (40%), Positives = 502/907 (55%), Gaps = 113/907 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 155 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 214
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+R+ NY CDITY NSELGFDYLRDNLA + E+LV+
Sbjct: 215 EWVGQVPRFLGLKVGLIQQNMTPEQRKENYLCDITYVTNSELGFDYLRDNLATSVEELVL 274
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+A + +HYTV+ K
Sbjct: 275 R---DFNYCVIDEVDSILIDEARTPLIISGPAEKPSDQYYKAAKIASAFERDIHYTVDEK 331
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G AE L+ DL+D + WA +V+NA+KAKE + RDV YI+R + LI+
Sbjct: 332 QKTVLLTEQGYEDAEEILDVKDLYDPREQWASYVLNAIKAKELFLRDVNYIIRAKEVLIV 391
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ +S+ +A I+YQ+ F +PKL GMTGTA T
Sbjct: 392 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTAST 451
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GR VLVG+
Sbjct: 452 ESAEFESIYKLKVTIVPTNKPMIRKDESDVVFKAVNGKWRAVVVEISRMHKTGRAVLVGT 511
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS LL++ GI H VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 512 TSVEQSDELSQLLREAGITHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 571
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + L+ + + + V V K + PK ++ L + A LA
Sbjct: 572 LGGNAEFMARLKLREILMPRVVKPSDGVFVSVKKAPPKRTWKVNEKLFPCKLSNEKAKLA 631
Query: 458 KYVGKAEGKSW-----TYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALT 512
+ + ++W T EA+ S S E + ++I K +
Sbjct: 632 EEAVHSAVEAWGQKSLTELEAEERLSYSCEKGPVQD-----EVIAK----------LRTA 676
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+L++ K+ + + E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 677 FLAIAKEYKGYTDEERKKVVEAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLS 736
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D +F+ F D + + R ED+PIE + + L Q E Y+F IRK L E
Sbjct: 737 LEDNIFRIFGGDR---IQGMMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFE 793
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
FD+VL QR VY R+ L SL+
Sbjct: 794 FDDVLNSQRDRVYTERRRALMSD---------------------------------SLEP 820
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
L+ E+ + +DD+ G PD PK F +
Sbjct: 821 LIIEYAELT---MDDILEANIG-----------------------PDTPKESWDFEKLIA 854
Query: 753 KSSSLKRWLAICSDDLTKN--GRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEV 810
K L + DL K+ Y + LR D + V ++S MK+
Sbjct: 855 KVQQYCYLLNDLTPDLLKSQGSSYEGLQDYLRARGRDAYLQKREIVEKQS---PGLMKDA 911
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 912 ERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNV 971
Query: 871 VESLVQY 877
+ S+ Q+
Sbjct: 972 IYSIYQF 978
>gi|166919157|sp|A5GQ30.2|SECA_SYNR3 RecName: Full=Protein translocase subunit SecA
Length = 946
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 347/763 (45%), Positives = 459/763 (60%), Gaps = 57/763 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHDGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CD+TY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMSPAERRQNYGCDVTYATNSELGFDYLRDNMATDISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGL 150
R F + ++DEVDS+L+DE R PL+ISG+ + +Y AA + AE+ G+
Sbjct: 204 R---EFQYCVIDEVDSILVDEARTPLIISGQVERPQEKYNQAAALALQLDRAAEMSKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K SV LT+EG A AE L DL++ DPWA +V NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSVILTDEGYAKAESILGVEDLFNAADPWAHYVTNALKAKELFIKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI R+ + +I++E TGRV RRWS+G+HQAVEAKE + IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YITRDNEVVIVDEFTGRVMPGRRWSDGLHQAVEAKESMPIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN R DL Q + T GKW QE +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLEVTVVPTNRTRARRDLVDQVYKTETGKWRAVAQETAEV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL+++GIPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRTGRPVLVGTTSVEKSEVLSALLQEEGIPHNLLNAKPENVEREAEIVAQAGRTGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L R E + P +++
Sbjct: 501 TNMAGRGTDIILGGNTDYMARLKVREALLPRLVRP----EEGHRPPVPLQREASSGFAAA 556
Query: 447 LALLAKAALLAKYVGK---AEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSA 501
+ AK A+ +G+ E T E V++ +++ + EL+ I +
Sbjct: 557 ASAPAKPPSEARALGRLYPCELSPDTDAALADVARELVKLWGDRTLTVLELEDRISSAAE 616
Query: 502 MYPLGPTVALTYLSVL----KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
P + VL D + S E + V+ GGLHVIGT HESRR+DNQLRGR
Sbjct: 617 KAPSEDAGIMQLRQVLAQIRADYDAVISTEQASVRETGGLHVIGTERHESRRVDNQLRGR 676
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 677 AGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQK 734
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ +RK + E+DEV+ QR+ VY R+ +L G + +Q+ Y + +D+I+
Sbjct: 735 KVETYYYDMRKQVFEYDEVMNNQRRAVYVERRRVLEGRD--LKKQVLGYGERTMDDIVEA 792
Query: 678 NVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTL 717
V+P P W L L +KEF+ + + AG+S + L
Sbjct: 793 YVNPELPPEEWDLSHLTNKVKEFVYLLQDLEPQQLAGLSMEEL 835
>gi|148241185|ref|YP_001226342.1| preprotein translocase subunit SecA [Synechococcus sp. RCC307]
gi|147849495|emb|CAK26989.1| Preprotein translocase SecA subunit [Synechococcus sp. RCC307]
Length = 978
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 348/769 (45%), Positives = 461/769 (59%), Gaps = 57/769 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 116 MRHFDVQLLGGMVLHDGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 175
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CD+TY NSELGFDYLRDN+A + ++V
Sbjct: 176 EWMGQVHRFLGLSVGLIQQDMSPAERRQNYGCDVTYATNSELGFDYLRDNMATDISEVVQ 235
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGL 150
R F + ++DEVDS+L+DE R PL+ISG+ + +Y AA + AE+ G+
Sbjct: 236 R---EFQYCVIDEVDSILVDEARTPLIISGQVERPQEKYNQAAALALQLDRAAEMSKDGI 292
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K SV LT+EG A AE L DL++ DPWA +V NALKAKE + +DV
Sbjct: 293 DPEGDYEVDEKQRSVILTDEGYAKAESILGVEDLFNAADPWAHYVTNALKAKELFIKDVN 352
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI R+ + +I++E TGRV RRWS+G+HQAVEAKE + IQ ++ +A ITYQ+ F LYP
Sbjct: 353 YITRDNEVVIVDEFTGRVMPGRRWSDGLHQAVEAKESMPIQPETQTLASITYQNFFLLYP 412
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN R DL Q + T GKW QE +
Sbjct: 413 RLAGMTGTAKTEEVEFEKTYKLEVTVVPTNRTRARRDLVDQVYKTETGKWRAVAQETAEV 472
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL+++GIPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 473 HRTGRPVLVGTTSVEKSEVLSALLQEEGIPHNLLNAKPENVEREAEIVAQAGRTGAVTIA 532
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L R E + P +++
Sbjct: 533 TNMAGRGTDIILGGNTDYMARLKVREALLPRLVRP----EEGHRPPVPLQREASSGFAAA 588
Query: 447 LALLAKAALLAKYVGK---AEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSA 501
+ AK A+ +G+ E T E V++ +++ + EL+ I +
Sbjct: 589 ASAPAKPPSEARALGRLYPCELSPDTDAALADVARELVKLWGDRTLTVLELEDRISSAAE 648
Query: 502 MYPLGPTVALTYLSVL----KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
P + VL D + S E + V+ GGLHVIGT HESRR+DNQLRGR
Sbjct: 649 KAPSEDAGIMQLRQVLAQIRADYDAVISTEQASVRETGGLHVIGTERHESRRVDNQLRGR 708
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L G Q
Sbjct: 709 AGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQK 766
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E YY+ +RK + E+DEV+ QR+ VY R+ +L G + +Q+ Y + +D+I+
Sbjct: 767 KVETYYYDMRKQVFEYDEVMNNQRRAVYVERRRVLEGRD--LKKQVLGYGERTMDDIVEA 824
Query: 678 NVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
V+P P W L L +KEF+ + + AG+S + L + E
Sbjct: 825 YVNPELPPEEWDLSHLTNKVKEFVYLLQDLEPQQLAGLSMEELKAFLHE 873
>gi|113952715|ref|YP_729323.1| preprotein translocase subunit SecA [Synechococcus sp. CC9311]
gi|122945878|sp|Q0IDZ9.1|SECA_SYNS3 RecName: Full=Protein translocase subunit SecA
gi|113880066|gb|ABI45024.1| preprotein translocase, SecA subunit [Synechococcus sp. CC9311]
Length = 950
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 349/776 (44%), Positives = 459/776 (59%), Gaps = 66/776 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQMIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMTPAERRINYGCDITYATNSELGFDYLRDNMAADINEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F F ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L +
Sbjct: 204 R---EFQFCVIDEVDSILIDEARTPLIISGQVERPQEKYEKAAEVANALERAAEMGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG AE + DL++ DPWA ++ NALKAKE + RDV
Sbjct: 261 DPEGDYEVDEKQRSSTLTDEGFTKAEALIGVADLYNPQDPWAHYITNALKAKELFVRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKEGL IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLAIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K + + VPTN R D Q + T KW +E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYSLQTAIVPTNRVRARQDWVDQVYKTETAKWRAVAKETAEV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR ++TI+
Sbjct: 441 HKQGRPVLVGTTSVEKSELLSALLAEENIPHNLLNAKPENVEREAEIVAQAGRAGSVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L R +D P L + G
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRP------EDDHRPPVPLQRSEEGGGG 554
Query: 447 LALLAKAALL---AKYVGKAEGKSWTYQEAKSFFSESVEMSQ---------SMNLKELQK 494
+ A A+ A KA G + Q + VE+++ ++++ EL+
Sbjct: 555 FSATAPASGPHGNAPSEAKAIGNLYPCQLTEETDQALVELAKQLVKAWGDRALSVIELED 614
Query: 495 LIDKQSAMYPL-GPTVALTYLSVLK---DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I + P P +A S+ + + + E V+ GGLHVIGT HESRR+
Sbjct: 615 RIATAAEKAPTEDPEIAQLRASIAQVKGEYDAVVKQEEMGVREAGGLHVIGTERHESRRV 674
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL D + + F + L++ +EDMPIE + R
Sbjct: 675 DNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGGER--VAGLMNAFRVEEDMPIESGMLTR 732
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G +Q+ Y +
Sbjct: 733 SLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYTERRRVLDG--RELKKQVIGYGERT 790
Query: 671 VDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
++EI+ V+P P W + +L +KEF+ + + D G+S D L ++E
Sbjct: 791 MNEIVEAYVNPDLPPEEWDVSQLVSKVKEFVYLLEDLQPDQLQGLSMDDLKAFLQE 846
>gi|78211636|ref|YP_380415.1| preprotein translocase subunit SecA [Synechococcus sp. CC9605]
gi|123579016|sp|Q3ANH2.1|SECA_SYNSC RecName: Full=Protein translocase subunit SecA
gi|78196095|gb|ABB33860.1| preprotein translocase, SecA subunit [Synechococcus sp. CC9605]
Length = 934
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 345/766 (45%), Positives = 456/766 (59%), Gaps = 56/766 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M PEERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMRPEERRRNYNCDITYATNSELGFDYLRDNMAADISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L +
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAAEVANALARAAELSKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L DL++ DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQMLGVADLFNPQDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ+++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALAIQSETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETTIVPTNRVRARQDWADQVYKTEAAKWRAVANETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ RE+E VAQAGR A+TI+
Sbjct: 441 HKNGRPVLVGTTSVEKSELLSSLLAEQEIPHNLLNAKPENVERESEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L V+ ++ + P L G S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLGRL------VKPEEDHTPPVPLQRSAPGGFS 554
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSAMYP 504
A + + T Q + V+ +++ + EL++ I + P
Sbjct: 555 DAAAPSLPRSGESLYPCPLTDDTDQALGQLARDLVKAWGDRALTVIELEERIATAAEKAP 614
Query: 505 L-GPTVALTYLSVLK---DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
P + ++ + + + E S V+ GGLHVIGT HESRR+DNQLRGRAGR
Sbjct: 615 TEAPQIQALREAIARVKGEYDAVVKQEESRVREAGGLHVIGTERHESRRVDNQLRGRAGR 674
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGSTRF +SL D + + F D L++ +EDMPIE + R L G Q E
Sbjct: 675 QGDPGSTRFFLSLGDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQKKVE 732
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
YY+ IRK + E+DEV+ QR+ VY R+ +L G + +Q+ Y + + EI+ V+
Sbjct: 733 TYYYDIRKQVFEYDEVMNNQRRAVYSERRRVLDG--RALKKQVIGYGERTMGEIVEAYVN 790
Query: 681 PLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
P P W LD+L +KEFI + + D G+ + L ++E
Sbjct: 791 PDLPPEEWDLDQLVGKVKEFIYLLEDLTPDQVQGLGMEELKAFLQE 836
>gi|359461993|ref|ZP_09250556.1| preprotein translocase subunit SecA [Acaryochloris sp. CCMEE 5410]
Length = 929
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 339/764 (44%), Positives = 465/764 (60%), Gaps = 75/764 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LHDG IAEMKT +TVNDYLA+RDA
Sbjct: 77 MRHFDVQLLGGMILHDGQIAEMKTGEGKTLVSTLPAYLNALTGKGVHAITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSE+GFDYLRDN++ + E++V
Sbjct: 137 EWMGQVHRFLGLSVGLIQQSMSPTERKKNYACDITYGTNSEIGFDYLRDNMSTSIEEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++ ++DEVDSVLIDE R PL+ISG+ + +Y A+KVA L HY V+ K
Sbjct: 197 R---PLNYCVIDEVDSVLIDEARTPLIISGQVERPTEKYLDASKVANALQPEEHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L +DL+D DPWA +V NA+KAKE + DV YIVRN + +I+
Sbjct: 254 ARNVILTDEGFVEAEKILGVSDLFDPEDPWAHYVFNAIKAKELFINDVNYIVRNDEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LY KL+GMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKEKVEIQNETQTLATITYQNLFLLYDKLAGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V VPTN N R D+ + + KW E M+ +GRP+LVG+
Sbjct: 374 EEAEFEKIYKLEVTIVPTNRSNQRQDISDVVYKSEEAKWLAVANECADMYEVGRPILVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL ++ IPHN+LNA+P+ RE+E VAQAGR+ +TI+TNMAGRGTDII
Sbjct: 434 TSVEKSEVLSKLLLERNIPHNLLNAKPENVERESEIVAQAGREGRVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ + + L+ + V + +P + ++KL +
Sbjct: 494 LGGNAEYMARLKVREYLMPRI--------VQPEDDNPLSMMQVKLPEADSQGFGGD---- 541
Query: 458 KYVGKAEG---KSWTY----------QEAKSFFSESVEMS------QSMNLKELQKLIDK 498
G+ +G K+W ++A+S E+V + QS+ + + L+
Sbjct: 542 ---GQQKGIQRKTWKVSPEIFPTTISKDAESLLKEAVNAAVKQYGEQSLPELQAEDLMAV 598
Query: 499 QSAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
S P V Y +L++ E S E +V GGLHVIGT H+SRRIDNQL
Sbjct: 599 ASEKAPTDDPVIQKLREVYNLILEEYEAFTSKEHDKVVERGGLHVIGTERHDSRRIDNQL 658
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGDPGSTRF +SLQD + + F D L++ +EDMPIE + L
Sbjct: 659 RGRAGRQGDPGSTRFFLSLQDNLLRIFGGDR--VAGLMNAFRVEEDMPIESRILTSSLEN 716
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G E +++ +Y + +D+I
Sbjct: 717 AQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--EDLKERVIEYAEQTMDDI 774
Query: 675 IFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGD 715
+ V+P P W+L++L+ KEF+ +L+DL A D
Sbjct: 775 VEAYVNPELPPEEWNLEQLVDKTKEFVY----LLEDLEASHIAD 814
>gi|332706891|ref|ZP_08426952.1| protein translocase subunit secA [Moorea producens 3L]
gi|332354775|gb|EGJ34254.1| protein translocase subunit secA [Moorea producens 3L]
Length = 938
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 333/742 (44%), Positives = 458/742 (61%), Gaps = 56/742 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHYDVQVMGGIVLHKGQIAEMKTGEGKTLVATLPAYLNAIDSKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ GM P ER+ NY CDITY+ NSELGFDYLRDN+A +V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSGMSPVERQKNYACDITYSTNSELGFDYLRDNMATAMSDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV--------QG 149
R PF++ I+DEVDSVLIDE R PL+ISG+ + +Y AA++A +L Q
Sbjct: 204 R---PFNYCIIDEVDSVLIDEARTPLIISGQVERPTEKYIKAAEIARMLYPEDPDNAEQL 260
Query: 150 LHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIV 209
HY V+ K ++ +T+EG AE L DL+D DPWA ++ NALKAKE +++DV YIV
Sbjct: 261 GHYEVDEKARNILMTDEGFIEAEQLLGVKDLYDPKDPWAHYISNALKAKELFQKDVNYIV 320
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
RNG+ +I++E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+ F LYPKL+
Sbjct: 321 RNGEVVIVDEFTGRVLAGRRWSDGLHQAIEAKERVDIQNETQTLATITYQNFFLLYPKLA 380
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTAKTEE EF K++ + V +PTN P+ R D+ + T KW +E +
Sbjct: 381 GMTGTAKTEEAEFEKIYNLQVTIIPTNKPSKRRDVSDVVYKTEPAKWRAVAEECAELHEQ 440
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 389
GRPVLVG+TSVE SE LS LL ++G+PHN+LNA+P+ RE+E VAQAGRK A+TISTNM
Sbjct: 441 GRPVLVGTTSVEKSELLSGLLAEKGVPHNLLNAKPENVERESEIVAQAGRKGALTISTNM 500
Query: 390 AGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLAL 449
AGRGTDIILGGN +A+ + + + + + +D+ +P ++ K S ++
Sbjct: 501 AGRGTDIILGGNADFMARLKLREYFMPKIVQPE-----EDEAFAPIAVTTAKPKSDAVGF 555
Query: 450 L----AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKEL---QKL-IDKQSA 501
K+ ++ + + T Q K + +VE +L EL +KL I ++A
Sbjct: 556 APGKKPKSWKVSPQIFPTKLSRETEQSLKEAVNFAVEQYGQQSLPELEAEEKLAIASENA 615
Query: 502 MY--PLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAG 559
P+ + Y ++ + + + E EV GGLHV+GT HESRRIDNQLRGRAG
Sbjct: 616 PTNDPVIQKLREVYKAIRGEYDAFTTREHDEVVEKGGLHVVGTERHESRRIDNQLRGRAG 675
Query: 560 RQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA 619
RQGDPGSTRF +SL+D + + F D + + R+ +EDMPIE + L Q
Sbjct: 676 RQGDPGSTRFFLSLEDNLLRIFGGDRVAKMMDMFRV--EEDMPIESGMLTSSLENAQKKV 733
Query: 620 EKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNV 679
E +Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + + +I+ V
Sbjct: 734 ETFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVIQYAEKTMSDIVDAYV 791
Query: 680 DPLKHPRYWSLDKL---LKEFI 698
+P P W L+ L +KEF+
Sbjct: 792 NPELPPEEWDLESLVGKVKEFV 813
>gi|352095365|ref|ZP_08956468.1| Protein translocase subunit secA [Synechococcus sp. WH 8016]
gi|351679376|gb|EHA62518.1| Protein translocase subunit secA [Synechococcus sp. WH 8016]
Length = 948
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 348/776 (44%), Positives = 460/776 (59%), Gaps = 66/776 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQMIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMTPAERRINYGCDITYATNSELGFDYLRDNMAADINEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L +
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVANALERAAEMGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE + DL++ DPWA ++ NALKAKE + RDV
Sbjct: 261 DPEGDYEVDEKQRSSTLTDEGFAKAEALIGVADLYNPQDPWAHYITNALKAKELFVRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKEGL+IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLEIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K + + VPTN R D Q + T KW +E +
Sbjct: 381 RLAGMTGTAKTEETEFEKTYSLQTAIVPTNRVRARQDWVDQVYKTETAKWRAVAKETAEV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR ++TI+
Sbjct: 441 HKQGRPVLVGTTSVEKSELLSALLAEENIPHNLLNAKPENVEREAEIVAQAGRAGSVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L R +D P L G
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRP------EDGHRPPVPLQRSAEGGGG 554
Query: 447 LALLAKAALL---AKYVGKAEGKSWTYQEAKSFFSESVEMSQ---------SMNLKELQK 494
+ A A+ A KA G + Q + VE+++ ++++ EL+
Sbjct: 555 FSESAPASGPHGNAPSEAKAIGNLYPCQLTEETDQALVELAKQLVKAWGDRALSVIELED 614
Query: 495 LIDKQSAMYPL-GPTVALTYLSVLK---DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRI 550
I + P P +A ++ + + + E V+ GGLHVIGT HESRR+
Sbjct: 615 RIATAAEKAPTEDPEIAQLRAAIAQVKGEYDAVVKKEEMGVREAGGLHVIGTERHESRRV 674
Query: 551 DNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVR 610
DNQLRGRAGRQGDPGSTRF +SL D + + F + L++ +EDMPIE + R
Sbjct: 675 DNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGGER--VAGLMNAFRVEEDMPIESGMLTR 732
Query: 611 QLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAV 670
L G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G +Q+ Y +
Sbjct: 733 SLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYTERRRVLDG--RELKKQVIGYGERT 790
Query: 671 VDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
++EI+ V+P P W + +L +KEF+ + + D G+S D L ++E
Sbjct: 791 MNEIVEAYVNPDLPPEEWDVSQLVSKVKEFVYLLEDLQPDQLQGLSMDDLKAFLQE 846
>gi|300865967|ref|ZP_07110703.1| Protein translocase subunit secA [Oscillatoria sp. PCC 6506]
gi|300336033|emb|CBN55861.1| Protein translocase subunit secA [Oscillatoria sp. PCC 6506]
Length = 936
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 338/755 (44%), Positives = 455/755 (60%), Gaps = 50/755 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIILHKGQIAEMKTGEGKTLVSTLPAYLNALSGKGVHIITVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL+VGLIQ+GM P ER+ NY CD+TY NSE+GFDYLRDN+A E +V
Sbjct: 144 EWMGQIHRFLGLTVGLIQQGMEPGERQKNYACDVTYATNSEVGFDYLRDNMATAMEDVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL- 156
R PF+F ++DEVDSVLIDE R PL+ISG+ + +Y AA VA L + E+
Sbjct: 204 R---PFNFCVIDEVDSVLIDEARTPLIISGQVERPSEKYLRAADVAAALKKEEEEHYEVD 260
Query: 157 -KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V +T+EG A AE L DL+D DPWA ++ NALKAKE + +DV YIVR G+ +
Sbjct: 261 EKARNVLMTDEGFAKAEEILGVKDLYDPADPWAHYIFNALKAKELFIKDVNYIVREGEVV 320
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGMTGTA
Sbjct: 321 IVDEFTGRVMPGRRWSDGLHQAIEAKERVEIQPETQTLATITYQNFFLLYPKLSGMTGTA 380
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KTEE EF K++ + V PTN P R DL + T GKW E M +GRPVLV
Sbjct: 381 KTEEAEFEKIYNLEVTVCPTNRPTGRHDLSDVVYKTEAGKWSAIAAECAEMHEVGRPVLV 440
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SE LS LL+++ IPHN+LNA+P+ RE+E +AQAGRK A+TI+TNMAGRGTD
Sbjct: 441 GTTSVEKSELLSRLLQERKIPHNLLNAKPENVERESEIIAQAGRKNAVTIATNMAGRGTD 500
Query: 396 IILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALL----A 451
IILGGN + +A+ + + + + + DD SP + + S +
Sbjct: 501 IILGGNAEYMARLKLREYFMPRIV-----LPEDDSNFSPVQVPGVGGRSKAQGFAPTQKV 555
Query: 452 KAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK------LIDKQSAMYPL 505
K+ + + E T Q K+ +V+ +L EL +K P+
Sbjct: 556 KSWKASPQLFPTELSKETLQNLKAAVEFAVKEYGERSLPELLAEDKVAVAAEKAPTQEPV 615
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
+ Y +L + E E EV +LGGLHVI T HESRRIDNQLRGRAGRQGDPG
Sbjct: 616 IQKLRDVYNQILHEYERFTDTEHDEVVKLGGLHVIATERHESRRIDNQLRGRAGRQGDPG 675
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
STRF +SL+D + + F D +L+ +EDMPIE + R L G Q E YY+
Sbjct: 676 STRFFLSLEDNLLRIFGGDR--VANLMQAFGVEEDMPIESGMLTRSLEGAQKKVETYYYD 733
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRK + E+DEV+ QR+ +Y R+ +L G +Q+ +Y + +D+I+ ++P
Sbjct: 734 IRKQVFEYDEVMNNQRRAIYAERRRVLEGL--EIKEQVIKYAEQTMDDIVGAYINPDLPS 791
Query: 686 RYWSLDKL---LKEFIAIAGKILDDLFAGISGDTL 717
W L+KL +KEF+ + +L +S D +
Sbjct: 792 EEWELEKLVIKVKEFVYLLEDMLPVQLEDLSVDEI 826
>gi|124026800|ref|YP_001015915.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
NATL1A]
gi|166918844|sp|A2C591.1|SECA_PROM1 RecName: Full=Protein translocase subunit SecA
gi|123961868|gb|ABM76651.1| Hypothetical protein NATL1_20951 [Prochlorococcus marinus str.
NATL1A]
Length = 944
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 357/785 (45%), Positives = 461/785 (58%), Gaps = 86/785 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGLSVGL+Q+ M P ER+ NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQIHRFLGLSVGLVQQSMAPLERKKNYECDITYATNSELGFDYLRDNMAADKSEIVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F F ++DEVDS+LIDE R PL+ISG+ + +Y AA+V E L + +
Sbjct: 204 R---DFQFCVIDEVDSILIDEARTPLIISGQVERSQEKYKQAAQVVENLKRAIDTSKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A E L DL+D +PWA +V NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDEGFANTEKLLNVQDLFDPKEPWAHYVTNALKAKELFIKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVRN +A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRNDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKENLSIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+LSGMTGTAKTEE EF K +++ VPTN R D Q F T KW +E +
Sbjct: 381 RLSGMTGTAKTEEVEFEKTYKLQTTVVPTNRKISRQDWVDQVFKTEAAKWRAVAKETADI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q +PHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HQKGRPVLVGTTSVEKSELLSTLLSEQQVPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLA----KKIIEDRLLLLLTREALNVEVDDKTSSPKVLSE--- 439
TNMAGRGTDIILGGN +A K+I+ +RL+ V KT S E
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKIKEILSNRLVKPEEGHKPPVSPQRKTKSAGFKEEKNK 560
Query: 440 ---IKLGSSSLALL------------AKAALLAKYVGKAEG-KSWTYQEAKSFFSESVEM 483
I + S + L AK A LA + K G +S + E + + + E
Sbjct: 561 NLSISKQNQSKSFLNIFPVSLTEDTDAKLASLASKLVKEWGDRSLSSIELDDYIATAAEK 620
Query: 484 --SQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIG 541
+Q N+KEL+ I + Y VL S E + V+R+GGLHVIG
Sbjct: 621 TPTQDKNIKELRIAIQ----------LIKNEYEEVL-------SQEETNVRRVGGLHVIG 663
Query: 542 TSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDM 601
T HESRR+DNQLRGRAGRQGD GSTRF +SL+D + + F D L++ +EDM
Sbjct: 664 TERHESRRVDNQLRGRAGRQGDLGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDM 721
Query: 602 PIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQ 661
PIE + R L G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G
Sbjct: 722 PIESGMLTRSLEGAQKKVETYYYDIRKQIFEYDEVMNNQRKAVYSERRRVLDG--RELKL 779
Query: 662 QIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLL 718
Q+ Y Q ++EI+ V+ P W+L L +KEFI + + + G++ + L
Sbjct: 780 QVIGYGQRTMEEIVEAYVNEDLPPEEWNLTNLVSKVKEFIYLLEDLKPEDLLGLNKNELK 839
Query: 719 KSIEE 723
++E
Sbjct: 840 DFLKE 844
>gi|4558549|gb|AAD22642.1|AC007138_6 putative SecA-type chloroplast protein transport factor
[Arabidopsis thaliana]
gi|7268223|emb|CAB77750.1| putative SecA-type chloroplast protein transport factor
[Arabidopsis thaliana]
Length = 1021
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 367/908 (40%), Positives = 502/908 (55%), Gaps = 116/908 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 155 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 214
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANS-EQLV 96
EW+ +V RFLGL VGLIQ+ M PE+R+ NY CDITY NSELGFDYLRDNLA S E+LV
Sbjct: 215 EWVGQVPRFLGLKVGLIQQNMTPEQRKENYLCDITYVTNSELGFDYLRDNLATESVEELV 274
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
+R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+A + +HYTV+
Sbjct: 275 LR---DFNYCVIDEVDSILIDEARTPLIISGPAEKPSDQYYKAAKIASAFERDIHYTVDE 331
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LTE+G AE L+ DL+D + WA +V+NA+KAKE + RDV YI+R + LI
Sbjct: 332 KQKTVLLTEQGYEDAEEILDVKDLYDPREQWASYVLNAIKAKELFLRDVNYIIRAKEVLI 391
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV + RRWS+G+HQAVEAKEGL IQ +S+ +A I+YQ+ F +PKL GMTGTA
Sbjct: 392 VDEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTAS 451
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF ++++ V VPTN P IR D F GKW E+ M + GR VLVG
Sbjct: 452 TESAEFESIYKLKVTIVPTNKPMIRKDESDVVFKAVNGKWRAVVVEISRMHKTGRAVLVG 511
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE S+ LS LL++ GI H VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDI
Sbjct: 512 TTSVEQSDELSQLLREAGITHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDI 571
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
ILGGN + +A+ + + L+ + + V V K + PK ++ L + A L
Sbjct: 572 ILGGNAEFMARLKLREILMPRVVKPTDGVFVSVKKAPPKRTWKVNEKLFPCKLSNEKAKL 631
Query: 457 AKYVGKAEGKSW-----TYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVAL 511
A+ ++ ++W T EA+ S S E + ++I K +
Sbjct: 632 AEEAVQSAVEAWGQKSLTELEAEERLSYSCEKGPVQD-----EVIGK----------LRT 676
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
+L++ K+ + + E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF +
Sbjct: 677 AFLAIAKEYKGYTDEERKKVT--GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFL 734
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D +F+ F D + + R ED+PIE + + L Q E Y+F IRK L
Sbjct: 735 SLEDNIFRIFGGDR---IQGMMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLF 791
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD 691
EFDEVL QR VY R+ L SL+
Sbjct: 792 EFDEVLNSQRDRVYTERRRALVSD---------------------------------SLE 818
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
L+ E+ + +DD+ G PD PK F +
Sbjct: 819 PLIIEYAELT---MDDILEANIG-----------------------PDTPKESWDFEKLI 852
Query: 752 RKSSSLKRWLAICSDDLTKN--GRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
K L + DL K+ Y + LR D + V ++S MK+
Sbjct: 853 AKVQQYCYLLNDLTPDLLKSEGSSYEGLQDYLRARGRDAYLQKREIVEKQS---PGLMKD 909
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR
Sbjct: 910 AERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRN 969
Query: 870 TVESLVQY 877
+ S+ Q+
Sbjct: 970 VIYSIYQF 977
>gi|318042896|ref|ZP_07974852.1| preprotein translocase subunit SecA [Synechococcus sp. CB0101]
Length = 956
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 355/774 (45%), Positives = 463/774 (59%), Gaps = 64/774 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 96 MRHFDVQLIGGMVLHDGQIAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLARRDA 155
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P RR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 156 EWMGQVHRFLGLSVGLIQQDMDPATRRLNYGCDITYATNSELGFDYLRDNMAADIAEVVQ 215
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R FH+ ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA LV+
Sbjct: 216 R---DFHYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVAAALVRAAELGKDGI 272
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K + LT+EG A AE L +DL+D DPWA ++ NALKAKE + +DV
Sbjct: 273 DPEGDYEVDEKQRNCTLTDEGYAKAEQLLGVSDLFDPQDPWAHYINNALKAKELFVKDVN 332
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR A+I++E TGRV RRWS+G HQA+EAKEGL IQ ++ +A ITYQ+ F LYP
Sbjct: 333 YIVRGSDAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLPIQPETQTLASITYQNFFLLYP 392
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ V VPTN R D Q + KW E +
Sbjct: 393 RLAGMTGTAKTEEVEFEKTYKLEVTIVPTNRIRSRADWTDQVYKNETAKWRAVALETAEV 452
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 453 HKTGRPVLVGTTSVEKSELLSALLAEQQIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 512
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIK----- 441
TNMAGRGTDIILGGN +A+ + + LL L R ++ P L
Sbjct: 513 TNMAGRGTDIILGGNADYMARLKLREVLLPRLVRP------EEGHKPPVPLQRAPEAAPG 566
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQ--KLIDKQ 499
G++S A AKA A+ +G + T S + ++ ++ ++L +L DK
Sbjct: 567 FGAASSAAAAKAPSEARAIGALYPCALTDATEHSLSELAHDLVKAWGDRQLTVLELEDKI 626
Query: 500 SAMYPLGPT-----VALTYL--SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDN 552
+ PT AL + V + EV +E +V+ GGLHVIGT HESRR+DN
Sbjct: 627 AQAAEKAPTDDAQIQALRSMIARVKAEYEVVTGSEDEQVREAGGLHVIGTERHESRRVDN 686
Query: 553 QLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQL 612
QLRGRAGRQGDPGSTRF +SL+D + + F D L++ +EDMPIE + R L
Sbjct: 687 QLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSL 744
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G QQ+ Y + +
Sbjct: 745 EGAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYAERRRVLEG--RELKQQVVGYGERTMT 802
Query: 673 EIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+I+ V+P P W LD+L ++EF+ + + + G+S + L ++E
Sbjct: 803 DIVEAYVNPDLPPEEWDLDRLVSKVQEFVYLLEDLKPEQLRGLSVEELKAFLQE 856
>gi|284929294|ref|YP_003421816.1| protein translocase subunit secA [cyanobacterium UCYN-A]
gi|284809738|gb|ADB95435.1| protein translocase subunit secA [cyanobacterium UCYN-A]
Length = 932
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/743 (44%), Positives = 458/743 (61%), Gaps = 50/743 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHKGQIAEMKTGEGKTLVGTLPAYLNGLTKKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ GM PEERR NY CDITYT NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQSGMNPEERRKNYSCDITYTTNSELGFDYLRDNMATSMSEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R P ++ I+DEVDS+LIDE R PL+ISG+ + +Y A ++A+ L + L
Sbjct: 204 RPP---YYCIIDEVDSILIDEARTPLIISGQVERPTEKYLKATEIAKHLEKQLSEDDQKE 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T++G AE L DL+D+ +PWA ++ NA+KAKE + +DV YIV+N
Sbjct: 261 YEVDEKARNVLMTDQGFEKAEKLLGVQDLYDQENPWAHYIFNAVKAKELFTKDVNYIVKN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKE + IQ ++ +A ITYQ+ F LY +LSGM
Sbjct: 321 QEVVIVDEFTGRVLAGRRWSDGLHQAIEAKEEVPIQKETQTLATITYQNFFLLYNQLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V +PTN P+ R D P + T + KW+ QEVE +LGR
Sbjct: 381 TGTAKTEETELEKIYNLQVTIIPTNRPSQRHDNPDVVYKTEKAKWKAVAQEVEEFHKLGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE S+ +S LL+++ IPHN+LNARP+ RE+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSDVISALLQEKNIPHNILNARPENVERESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDIILGGN +A+ I + L+ + + D+ + K +S
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLMPQVV-----IPEDNNLTKEKKISNTNSRGFGQDQNK 555
Query: 452 KAALLAKYVGKAEGKSWTYQEAKSFFSESVEMS--QSMNLKELQKLIDKQSAMYPLGPTV 509
K + + + T + KS +V+ QS+ E ++ I S P
Sbjct: 556 KKWQPSVDIFPTQLSQKTQELIKSVVKFAVDKYGLQSVTELEAEEKIAIASENAPTEDVF 615
Query: 510 AL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
L Y + ++ +V+ E EV +LGGL+V+ T HESRR+DNQLRGR+GRQGDPG
Sbjct: 616 VLKLREVYKIIRQEYDVYTDAEHDEVVKLGGLYVMATERHESRRVDNQLRGRSGRQGDPG 675
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
+T+F +SL+D + + F D V L++ +E+MPIE + R L G Q E +Y+
Sbjct: 676 TTKFFLSLEDNLLRIFGGDR--VVGLMNAFRVEEEMPIESKMLTRSLEGAQKKVETFYYD 733
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +DEI+ V+P P
Sbjct: 734 TRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYAEKTMDEIVDAYVNPELPP 791
Query: 686 RYWSLDKL---LKEFIAIAGKIL 705
W + L +KEF+ + I+
Sbjct: 792 EEWDVKNLVNKIKEFVYLLKDIV 814
>gi|443316839|ref|ZP_21046268.1| preprotein translocase, SecA subunit [Leptolyngbya sp. PCC 6406]
gi|442783572|gb|ELR93483.1| preprotein translocase, SecA subunit [Leptolyngbya sp. PCC 6406]
Length = 929
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 337/747 (45%), Positives = 446/747 (59%), Gaps = 74/747 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+ GG VLHDG IAEMKT +VTVNDYLA+RDA
Sbjct: 77 MRHFDVQLTGGMVLHDGQIAEMKTGEGKTLVATLPAYLNALSGKGVHIVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL VGLIQ+GM P +R+ NY CDITY NSE GFDYLRDN+A +V
Sbjct: 137 EWMGQIHRFLGLEVGLIQQGMSPTDRKKNYACDITYGTNSEFGFDYLRDNMATAIGDVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+LIDE R PL+ISG+ + +Y AA +A L HY V+ K
Sbjct: 197 R---PFNFCIIDEVDSILIDEARTPLIISGQIERPGEKYTQAADIARQLNGEDHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+EG AE L DL+D DPWA ++ NA+KAKE + +DV YIVRN + +I+
Sbjct: 254 ARNVLLTDEGFIQAEQLLGVQDLFDPQDPWAHYIFNAIKAKELFIKDVNYIVRNNEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRVMPGRRWSDGLHQAIEAKEHVEIQPETQTLASITYQNFFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V + TN + R D+ + T KW+ E M + GRPVLVG+
Sbjct: 374 EEPEFEKIYELEVTVIDTNRTSRRRDVADVVYKTEEAKWQAVAGECAEMHQTGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK IPHN+LNA+P+ REAE VAQAGR A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSGLLKALNIPHNLLNAKPENVEREAEIVAQAGRSGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVL---SEIKLGSSSLALLAKAA 454
LGGN +A+ + + L+ P+++ E + G S+A +
Sbjct: 494 LGGNADYMARLKVREYLM------------------PRIVKPEDEDEFGVKSVAGVRGRN 535
Query: 455 LLAKYVGKAEGKSWTY----------QEAKSFFSESVEMSQSM----NLKELQK------ 494
+ + K+W QEA+ E V+++ + +L+EL+
Sbjct: 536 RPQGFGSDKKVKTWKASPDIFPTELSQEAELALKEMVDLAVTTYGERSLEELEAEDKVAI 595
Query: 495 LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
+K P+ + Y V K+ E E V LGGLHVIGT HESRR+DNQL
Sbjct: 596 AAEKAPTSDPVIAKLREVYNRVRKEYETLTDAEHERVISLGGLHVIGTERHESRRVDNQL 655
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGDPGSTRF +SLQD + + F D L++ +EDMPIE + R L G
Sbjct: 656 RGRAGRQGDPGSTRFFLSLQDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEG 713
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G E + + +Y + +D+I
Sbjct: 714 AQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--EGLKELVIKYAEQTMDDI 771
Query: 675 IFGNVDPLKHPRYWSLDKL---LKEFI 698
+ V+P W L + +KEF+
Sbjct: 772 VEAYVNPELPSEEWKLPDMVGKVKEFV 798
>gi|116071711|ref|ZP_01468979.1| translocase [Synechococcus sp. BL107]
gi|116065334|gb|EAU71092.1| translocase [Synechococcus sp. BL107]
Length = 937
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 352/782 (45%), Positives = 470/782 (60%), Gaps = 87/782 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M PEERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMRPEERRRNYACDITYATNSELGFDYLRDNMAADISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------ELLVQGL 150
R F F ++DEVDS+LIDE R PL+ISG+ ++ +Y AA++A E+ G+
Sbjct: 204 R---EFQFCVIDEVDSILIDEARTPLIISGQVEREQEKYQQAAQLAASLERSAEMGKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L DL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEKTLGVQDLFDPQDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+ +A+I++E TGRV RRWS+G HQA+EAKE L+IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEKLQIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLQTTIVPTNRIRARQDWADQVYKTEVAKWRAVANETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ RPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ RE+E VAQAGR A+TI+
Sbjct: 441 HKKARPVLVGTTSVEKSELLSSLLAEQDIPHNLLNAKPENVERESEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR---------------EALNVEVDDKT 431
TNMAGRGTDIILGGN +A+ + + LL L + A T
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLGRLVKPEDGPLPSLPVQDSASATGFSETSAT 560
Query: 432 SSPKV---LSEIKLGSSSLALLAKAALLAKYVGKAEG-KSWTYQEAKSFFSESVEMSQSM 487
+SP+ L +L S+ +LA+ LA+ + KA G ++ + + + + + E + +
Sbjct: 561 ASPRAGASLYPCELSESTDQVLAQ---LARDLVKAWGDRALSVLDLEERIATAAEKAPTE 617
Query: 488 NLKELQKLIDKQSAMYPLGPTVALT---YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSL 544
+ E+Q L + +AL Y +V+K+ E + V+ GGLHVIGT
Sbjct: 618 D-AEIQSLRE----------AIALVRGEYDAVVKE-------EEARVRDAGGLHVIGTER 659
Query: 545 HESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIE 604
HESRR+DNQLRGRAGRQGDPGSTRF +SL D + + F + L++ +EDMPIE
Sbjct: 660 HESRRVDNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGGER--VAGLMNAFRVEEDMPIE 717
Query: 605 GDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIF 664
+ R L G Q E YY+ IRK + E+DEV+ QR+ VY R+ +L G + +Q+
Sbjct: 718 SGMLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRRAVYSERRRVLDG--RALKKQVI 775
Query: 665 QYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSI 721
Y + ++EI+ V+P P W LD+L +KEFI + + G+ D L +
Sbjct: 776 GYGERTMNEIVEAYVNPDLPPEEWDLDQLVGKVKEFIYLLEDLTPAQVNGLGMDELKAFL 835
Query: 722 EE 723
+E
Sbjct: 836 QE 837
>gi|168001621|ref|XP_001753513.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695392|gb|EDQ81736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 917
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 332/719 (46%), Positives = 438/719 (60%), Gaps = 45/719 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 62 LRPFDVQLIGGMVLHKGQIAEMRTGEGKTLVAVLPAFLNCLTGQGVHVVTVNDYLARRDC 121
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +VHRFLGL VGLIQ+GM PEERR+NY CDITY NSELGFD+LRDNLA N E+LV+
Sbjct: 122 EWVGQVHRFLGLRVGLIQQGMTPEERRTNYNCDITYVTNSELGFDFLRDNLATNKEELVL 181
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F ++DEVDS+LIDE R PL+ISG A K RY AAK+A + HYTV+ K
Sbjct: 182 RG---FNFCVIDEVDSILIDEARTPLIISGSAEKPSERYIKAAKIASAFQRDYHYTVDEK 238
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV ++E G AE L DL+D + WA +++NA+KAKE + +DV YIVR +I+
Sbjct: 239 QKSVLMSEIGYEAAEEILNVTDLYDPREQWASYIINAIKAKELFLKDVNYIVRGQDVMIV 298
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEG+KIQ ++V +A I+YQ+ F YPKL GMTGTA T
Sbjct: 299 DEFTGRVMQGRRWSDGLHQAVEAKEGVKIQNETVTLASISYQNFFLQYPKLCGMTGTAAT 358
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++++ V VPTN P IR D F + GKW A E+ M + GRPVLVG+
Sbjct: 359 EVDEFEKIYKLKVTVVPTNKPMIRKDESDVVFKSVNGKWRAAVVEISRMHKTGRPVLVGT 418
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS L + IPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 419 TSVEQSESLSAQLTEASIPHQVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 478
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSL---ALLAKAA 454
LGGN + +A+ + + L+ + R + + E+ + + + + SL L A
Sbjct: 479 LGGNAEFMARLKLREMLMPRVVRLS-DEEIPFQKTKKLPTKKTWKVNPSLFPCELSNDCA 537
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYL 514
LA+ +A +W + +E L ++ P+ + L
Sbjct: 538 TLAEEAVEAAVNAWGEKALPELEAED----------RLSYACERGPTEDPVVAQLRKANL 587
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++L + + + E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGSTRF +SL+
Sbjct: 588 AILSEYKTYTDEEKKKVVAAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSTRFFLSLE 647
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D +F+ F D + R+ ED+PIE + + L Q E Y+F IRK L E+D
Sbjct: 648 DNIFRIFGGDRIQGLMKAFRV---EDLPIESKMLTKSLDEAQKKVESYFFDIRKQLFEYD 704
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
EVL QR VY R+ L N Q+ +Y + +D+I+ NVD W+L+ L
Sbjct: 705 EVLNSQRDRVYTERRRALEATN--LEAQMIEYAELTMDDILEANVDSSLPQEEWNLEAL 761
>gi|308799363|ref|XP_003074462.1| preprotein translocase secA family protein (ISS) [Ostreococcus
tauri]
gi|116000633|emb|CAL50313.1| preprotein translocase secA family protein (ISS) [Ostreococcus
tauri]
Length = 1090
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/709 (46%), Positives = 449/709 (63%), Gaps = 49/709 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+ HFDVQ+IGGA+LHDG +AEM T VVTVNDYLA RDA
Sbjct: 129 LTHFDVQLIGGALLHDGWVAEMSTGEGKTLVATLPAYLNALEGKGVHVVTVNDYLAARDA 188
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M R++RFLGL+VG+IQ M P ER+ Y CDITY N+E+GFDYLRDN+A ++ +V+
Sbjct: 189 AEMGRIYRFLGLTVGVIQSDMEPAERQLAYACDITYVTNTEIGFDYLRDNMANAADDMVV 248
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEAS-KDVARYPVAAKVAELLVQGLHYTVEL 156
+PF+FAIVDEVDSVLIDEGRNPLLI+G D Y AAKVAE L+ G + V L
Sbjct: 249 LM-RPFNFAIVDEVDSVLIDEGRNPLLITGVGEVNDDDMYRTAAKVAEHLIVGRDFKVVL 307
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K S ELT+EG++ AEM L+ +DLWD +P ++V+ A+KAK + +DV YIVR+GK +I
Sbjct: 308 KEKSAELTDEGMSRAEMMLQVDDLWDAQNPMGKYVLLAVKAKALFIKDVDYIVRDGKVII 367
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ TGRV+ RRW++ +HQAVEAKEG++I ++ ++A I+YQ LFKLY KLSGMTGTA
Sbjct: 368 VDPSTGRVQPNRRWNDNLHQAVEAKEGVEINGENSIIASISYQCLFKLYKKLSGMTGTAA 427
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF + + V VPTN PN+R+D P F + +W + + GRPVLVG
Sbjct: 428 TESEEFYTTYGLGVASVPTNKPNLRIDSPTALFLKSSPRWYAVADLILNCHLDGRPVLVG 487
Query: 337 STSVENSEYLSDLL-----------KQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
+TSVENSE LS +L K +GIPH +LNARP+YAAREAE V+QAGR+YA+TI
Sbjct: 488 TTSVENSELLSAILDAYVWETPDGRKIEGIPHELLNARPQYAAREAEIVSQAGRQYAVTI 547
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSS 445
STNMAGRGTDI+LGG+ LA + ++D+L L N EVD+ VL + L
Sbjct: 548 STNMAGRGTDILLGGSAHGLANRALKDKLCPYLVE---NGEVDEAA----VLMHVNLSPI 600
Query: 446 SLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPL 505
+ L +A L+A+ G S ++A F +++ ++ +++ + L
Sbjct: 601 TEQALQQAELVARASVMTAG-SLDAEQADKLFVDALVQAEEWLRRDIDPTFPNDVEV--L 657
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
++ +VL+DC+ C E V+++GGL VIGTS+H+SRR+DNQLRGRAGRQGDPG
Sbjct: 658 IKSIYTAAYAVLRDCQAQCEAEREVVRKVGGLQVIGTSIHDSRRVDNQLRGRAGRQGDPG 717
Query: 566 STRFMVSLQDEMFQKFSFDTSWA-VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
ST F VS +DE+ Q + W +L DE+ PI D + RQL +Q E Y
Sbjct: 718 STIFCVSAEDELLQTYC--PGWGNQNLWMFAGVDENAPIFSDMVDRQLRSVQKQIEDYLA 775
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDE 673
R+S + D VL+ QR+ VY LR+ IL + S +++F+YM +VD+
Sbjct: 776 SGRQSTFDSDMVLDSQREAVYKLRRQILLSSQSSLRKRLFKYMGQLVDD 824
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 743 PPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNV---VQE 799
PP+ G+ +KRW G + LR YL + + YL+ +
Sbjct: 937 PPS---GVEFSQEYIKRW---------SKGWHARKARGLRSYLTEAAVQMYLDRFARLAA 984
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
YD +++VER ++ +D W+ HL M L ++V VRSFGH +P +E++IDG R F
Sbjct: 985 QDYDRTELEDVERLWALRAVDTLWQQHLAQMEVLRTSVQVRSFGHLDPKDEFRIDGARAF 1044
Query: 860 ISMLSATRRLTVESLVQYWSSPME 883
+S++ R V+++ + + +E
Sbjct: 1045 VSLVEGIREDMVKNIFYFVGASVE 1068
>gi|149072090|ref|YP_001293505.1| preprotein translocase subunit A [Rhodomonas salina]
gi|166918849|sp|A6MVS6.1|SECA_RHDSA RecName: Full=Protein translocase subunit SecA
gi|134303041|gb|ABO70845.1| preprotein translocase subunit A [Rhodomonas salina]
Length = 877
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 368/899 (40%), Positives = 494/899 (54%), Gaps = 138/899 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG +LH+G IAEMKT +VTVNDYLA+RDA
Sbjct: 77 LRHFDVQLIGGMILHEGKIAEMKTGEGKTLVAILPAYLNALCGYGVHIVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V +FLGLSVGLIQ GM EER++NY DITYT NSELGFDYLRDN+A + +V
Sbjct: 137 EWVGQVPKFLGLSVGLIQEGMTQEERKNNYSQDITYTTNSELGFDYLRDNMAILLQDIVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+LIDE R PL+ISG +Y A+KV+ LV+ LHY V+ K
Sbjct: 197 R---PFYFCIIDEVDSILIDEARTPLIISGAGETTEEKYVQASKVSLNLVKNLHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+ GI +E LE DL++ +PWA ++ NALKAKE + +DV YIV++ + +I+
Sbjct: 254 ARNILLTDSGIVESEKQLECKDLYNVQNPWASYIFNALKAKELFIKDVHYIVKDSEVIIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RRWS+G+HQA+EAKE + Q ++ +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRIMQGRRWSDGLHQAIEAKENVPTQNETQTLASITYQNFFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + V VPT+ P R D + KW+ E M LGRPVL+G+
Sbjct: 374 EEAELDKIYALEVTCVPTHRPMQRKDYSDLIYKNQYAKWKSIADECLDMHTLGRPVLIGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ G+PHN+LNA+P+ REAE +AQAGRK A+TI+TNMAGRGTDI+
Sbjct: 434 TSVEKSELLSSLLKEYGVPHNLLNAKPENIKREAEIIAQAGRKGAVTIATNMAGRGTDIL 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNV---EVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
LGGN +AK ALN+ EV K+S K ++ +L S LL K
Sbjct: 494 LGGNSNYMAKN-------------ALNILLKEVPSKSSFTK--NDPQLQSLHSFLLNKI- 537
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYL 514
ES E+ ++ +K L T+ Y
Sbjct: 538 ------------------------ESYEIDDDELETKISIACEKGFTEDALTITLRAAYQ 573
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+++ E EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGS+RF +SL+
Sbjct: 574 ILIEKYSSLIKKEQGEVIALGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSSRFFLSLE 633
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D + + F D V+L+ + +ED+PIE + + L Q E YY+ RK L E+D
Sbjct: 634 DNLLRIFGGDK--IVNLMETLRVEEDVPIESMLLNKSLESAQKKVEAYYYDARKQLFEYD 691
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EVL QR +Y R+ IL N + QY + +++ I D KH S
Sbjct: 692 EVLNYQRLAIYSERRRILESNN--LRDWVIQYAETTIEDYIEHYFDK-KHSMPNS----- 743
Query: 695 KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL--PKPPNLFRGIRR 752
A ++LD IE+L L D++ YF L + N R
Sbjct: 744 ------ASEVLD-------------KIEDLLGL-PYDLDPMYFETLSTSEAKNFLYQQVR 783
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
+ LK DL +NG M+E+ER
Sbjct: 784 IAYDLKE----SQIDLIENG---------------------------------LMRELER 806
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ L++ +D W++HL MN L ++ R +G ++PL EYK + F SM + R V
Sbjct: 807 SFLLQKIDSAWKEHLQQMNSLRESIGWRGYGQKDPLIEYKNEAYDLFTSMTTNIRHSVV 865
>gi|159904308|ref|YP_001551652.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9211]
gi|226732230|sp|A9BD85.1|SECA_PROM4 RecName: Full=Protein translocase subunit SecA
gi|159889484|gb|ABX09698.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 945
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 351/788 (44%), Positives = 457/788 (57%), Gaps = 91/788 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSFLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+A++ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMTPLERRKNYECDITYATNSELGFDYLRDNMASDMSEIVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F F I+DEVDS+LIDE R PL+ISG+ + +Y AA+V L++
Sbjct: 204 R---KFQFCIIDEVDSILIDEARTPLIISGQIERPQEKYQKAAEVVASLIRAAEMGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K + LT+EG A +E L+ NDL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRTCTLTDEGFARSEELLKVNDLYDPKDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVRNG+A+I++E TGRV RRWS+G HQA+EAKE L IQ+++ +A ITYQ+ F LYP
Sbjct: 321 YIVRNGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEKLNIQSETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +Q+ +PTN P R D Q + T GKW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYQLETTVIPTNRPRSRNDWVDQVYKTEAGKWRAVANETAEV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HKKGRPVLVGTTSVEKSELLSSLLAEEQIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR-----------------EALNVEVDD 429
TNMAGRGTDIILGGN +A+ + + LL L + + D
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPKLVKPEDGHKPPVPLQRRSESSGFGEDKDV 560
Query: 430 KTSSPKVLSEIKLGSSSLALLAKAALLA-----------KYVGKAEGKSWTYQEAKSFFS 478
T + K LS SS+L L L K V ++ T E + S
Sbjct: 561 TTDNSKPLS----ASSALGTLYPCVLTEDTEKVLIDLERKLVADWGDRALTAIELEDRIS 616
Query: 479 ESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLH 538
+ E + + N +Q + D S V + +V E +V+ GGLH
Sbjct: 617 TAAEKAPT-NDASIQLMRDAISL--------------VKSEYDVVVQKEEVQVREAGGLH 661
Query: 539 VIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITND 598
VIGT HESRR+DNQLRGRAGRQGD GSTRF +SL D + + F D L++ D
Sbjct: 662 VIGTERHESRRVDNQLRGRAGRQGDLGSTRFFLSLGDNLLRIFGGDR--VASLMNAFKVD 719
Query: 599 EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANES 658
EDMPIE + R L Q E YY+ IRK + E+DEV+ QR+ VY R+ +L G
Sbjct: 720 EDMPIESGMLTRSLESAQKKVETYYYDIRKQVFEYDEVMNNQRRAVYSERRRVLDGF--G 777
Query: 659 CSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGD 715
+Q+ Y + ++EI++ V+P W L +L +KEF+ + + D G+ D
Sbjct: 778 LKKQVIGYGEKTMEEIVYAYVNPDLPSEEWDLAQLVSKVKEFVYLLNDLKPDQLEGLDID 837
Query: 716 TLLKSIEE 723
L ++E
Sbjct: 838 ELKAFLQE 845
>gi|78183707|ref|YP_376141.1| preprotein translocase subunit SecA [Synechococcus sp. CC9902]
gi|123582305|sp|Q3B0N0.1|SECA_SYNS9 RecName: Full=Protein translocase subunit SecA
gi|78168001|gb|ABB25098.1| protein translocase subunit secA [Synechococcus sp. CC9902]
Length = 937
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 353/780 (45%), Positives = 475/780 (60%), Gaps = 83/780 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M PEERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMRPEERRRNYACDITYATNSELGFDYLRDNMAADISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------ELLVQGL 150
R F F ++DEVDS+LIDE R PL+ISG+ ++ +Y AA++A E+ G+
Sbjct: 204 R---EFQFCVIDEVDSILIDEARTPLIISGQVEREQEKYQQAAQLAASLERSAEMGKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L DL+D DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQTLGVQDLFDPQDPWAHYITNALKAKELFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+ +A+I++E TGRV RRWS+G HQA+EAKE L+IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLQIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLQTTIVPTNRIRARQDWADQVYKTEVAKWRAVANETADI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ RPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ RE+E VAQAGR A+TI+
Sbjct: 441 HKKARPVLVGTTSVEKSELLSSLLTEQDIPHNLLNAKPENVERESEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR------EALNVEVDDKTSS------- 433
TNMAGRGTDIILGGN +A+ + + LL L + +L V+ D T+S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLSRLVKPEDGPLPSLPVQ-DSATASGFSEASA 559
Query: 434 ---PKV---LSEIKLGSSSLALLAKAALLAKYVGKAEG-KSWTYQEAKSFFSESVEMSQS 486
P+V L +L + LLA+ LA+ + KA G ++ + + + + + E + +
Sbjct: 560 TVAPRVSASLYPCELSGPTDQLLAQ---LARDLVKAWGDRALSVLDLEERIATAAEKAPT 616
Query: 487 MNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHE 546
+ ++Q L +++ + G Y +V+K+ E + V+ GGLHVIGT HE
Sbjct: 617 DD-AQIQSL--REAIAFVRG-----EYDAVVKE-------EEARVRDAGGLHVIGTERHE 661
Query: 547 SRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGD 606
SRR+DNQLRGRAGRQGDPGSTRF +SL D + + F + L++ +EDMPIE
Sbjct: 662 SRRVDNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGGER--VAGLMNAFRVEEDMPIESG 719
Query: 607 AIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQY 666
+ R L G Q E YY+ IRK + E+DEV+ QR+ VY R+ +L G + +Q+ Y
Sbjct: 720 MLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRRAVYSERRRVLDG--RALKKQVIGY 777
Query: 667 MQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+ ++EI+ V+P P W LD+L +KEFI + + G+ D L ++E
Sbjct: 778 GERTMNEIVEAYVNPDLPPEEWDLDQLVGKVKEFIYLLEDLTPAQVNGLGMDELKAFLQE 837
>gi|33864622|ref|NP_896181.1| preprotein translocase subunit SecA [Synechococcus sp. WH 8102]
gi|81712334|sp|Q7UA15.1|SECA_SYNPX RecName: Full=Protein translocase subunit SecA
gi|33632145|emb|CAE06601.1| preprotein translocase SecA subunit [Synechococcus sp. WH 8102]
Length = 937
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 344/766 (44%), Positives = 453/766 (59%), Gaps = 56/766 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M PEERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMRPEERRRNYNCDITYATNSELGFDYLRDNMAADISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-------AKVAELLVQGL 150
R F + ++DEVDS+LIDE R PL+ISG+ + +Y A + AE+ G+
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVQRPQEKYQQAAQVAQALTRAAEMGKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L DL+D DPWA ++ NALKAK+ + +DV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQMLGVQDLFDPQDPWAHYITNALKAKDLFVKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQA++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALPIQAETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D P Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETTIVPTNRVRARQDWPDQVYKTETAKWRAVANETVDI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ RE+E VAQAGR A+TI+
Sbjct: 441 HKNGRPVLVGTTSVEKSELLSALLAEQEIPHNLLNAKPENVERESEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L V+ ++ P L S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLGRL------VKPEENHKPPVPLQRNAAAGFS 554
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSAMYP 504
A A A + T Q + V+ +++ L EL++ I + P
Sbjct: 555 EAPTASATPSRDSLYPCVLTDDTDQTLAQLARDLVKAWGDRALTLIELEERIATAAEKAP 614
Query: 505 L-GPTVALTYLSVLK---DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
P + + + + + E V+ GGLHVIGT HESRR+DNQLRGRAGR
Sbjct: 615 TDDPNIQALRAATARVKGEFDAVVKQEEQRVREAGGLHVIGTERHESRRVDNQLRGRAGR 674
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGSTRF +SL D + + F D L++ +EDMPIE + R L G Q E
Sbjct: 675 QGDPGSTRFFLSLGDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQKKVE 732
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
YY+ IRK + E+DEV+ QR+ VY R+ +L G + +Q+ Y + ++EI+ V+
Sbjct: 733 TYYYDIRKQVFEYDEVMNNQRRAVYSERRRVLDG--RALKKQVIGYGERTMNEIVEAYVN 790
Query: 681 PLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
P P W +L +KEF+ + + + G+ D L ++E
Sbjct: 791 PDLPPEEWDTAQLVAKVKEFVYLLEDLTPEQVQGLGMDELKAFLQE 836
>gi|116074371|ref|ZP_01471633.1| translocase [Synechococcus sp. RS9916]
gi|116069676|gb|EAU75428.1| translocase [Synechococcus sp. RS9916]
Length = 950
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 347/767 (45%), Positives = 460/767 (59%), Gaps = 76/767 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P RR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMDPFTRRQNYACDITYATNSELGFDYLRDNMANDISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+V E L +
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAAQVVEALERAAEMGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E L +DL++ DPWA ++ NALKAKE + RDV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDDGFAKVEELLGVSDLYNPQDPWAHYITNALKAKELFVRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+ +A+I++E TGRV RRWS+G HQA+EAKEGL IQA++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDDEAVIVDEFTGRVMAGRRWSDGQHQAIEAKEGLPIQAETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R DL Q + T KW +E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETTIVPTNRVRARKDLADQVYKTETAKWRAVAKETAQI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRDGRPVLVGTTSVEKSELLSTLLAEESIPHNLLNAKPENVEREAEIVAQAGRSGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L V+ ++ P L + G +S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRL------VKPEEGHRPPVPLQ--RSGEAS 552
Query: 447 LALLAKAALLAKYVGKAE------GKSWTYQEAKSFFSESVEMSQ---------SMNLKE 491
AKAA G A G + Q ++ V++++ ++++ E
Sbjct: 553 -GFAAKAAPATGPHGNAPSEARAIGNLYPCQLSEDTDQSLVDLAKDLVKAWGDRTLSVIE 611
Query: 492 LQKLIDKQSAMYPL-GPTVALTYLSVLK---DCEVHCSNEGSEVKRLGGLHVIGTSLHES 547
L+ I + P P +A ++ + + +V E + V+ GGLHVIGT HES
Sbjct: 612 LEDRISTAAEKAPTEDPQIATLRAAIARVKAEYDVVIKQEEALVREAGGLHVIGTERHES 671
Query: 548 RRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDA 607
RR+DNQLRGRAGRQGDPGSTRF +SL D + + F D L++ +EDMPIE
Sbjct: 672 RRVDNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGGDR--VAGLMNAFRVEEDMPIESGM 729
Query: 608 IVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYM 667
+ R L G Q E YY+ IRK + E+DEV+ QR+ VY R+ +L G +Q+ Y
Sbjct: 730 LTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRRAVYTERRRVLDG--RELKKQVIGYG 787
Query: 668 QAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAG 711
+ ++EI+ V+P P W + +L +KEF+ +L+DL G
Sbjct: 788 ERTMNEIVEAYVNPDLPPEEWDVGQLVGKVKEFVY----LLEDLEPG 830
>gi|72383058|ref|YP_292413.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
NATL2A]
gi|123620690|sp|Q46IG8.1|SECA_PROMT RecName: Full=Protein translocase subunit SecA
gi|72002908|gb|AAZ58710.1| protein translocase subunit secA [Prochlorococcus marinus str.
NATL2A]
Length = 942
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 353/775 (45%), Positives = 464/775 (59%), Gaps = 80/775 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVSTLPSYLNALTGKGVHVVTVNDYLAKRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL VGLIQ+ M P ER+ NY+CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLEVGLIQQDMNPRERKKNYQCDITYATNSELGFDYLRDNMAADKAEIVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKV-------AELLVQGL 150
R F F ++DEVDS+LIDE R PL+ISG+ + +Y AA+V +EL G+
Sbjct: 204 R---DFQFCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVVMKLQRASELGKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E LE DL+D DPWA +V NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCVLTDDGFAKTEELLEVKDLFDPKDPWAHYVTNALKAKELFTKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVRNG+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRNGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKENLAIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+LSGMTGTAKTEE EF K +++ +PTN R D Q F T KW +E +
Sbjct: 381 RLSGMTGTAKTEEVEFDKTYKLKTSVIPTNKKVSREDWVDQVFKTENAKWRAVAKETSLI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRP+LVG+TSVE SE LS LL ++ IPHN+LNA+P+ RE+E VAQAGRK A+TI+
Sbjct: 441 NKQGRPILVGTTSVEKSELLSTLLAEENIPHNLLNAKPENVERESEIVAQAGRKGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLA----KKIIEDRLLLLLTREALNVEVD-DKTSSPKVL---S 438
TNMAGRGTDIILGGN + +A K+++ RL+ R V + DK S K L +
Sbjct: 501 TNMAGRGTDIILGGNSEYMAKLKIKQVLSSRLVKPEDRHNPPVPLQRDKASGFKSLEVKA 560
Query: 439 EIKLG--SSSLALLAK-----------AALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQ 485
E K SSSL L L AK V + ++ T E + + + + E +
Sbjct: 561 EAKTSNQSSSLNNLFPVILSDKTDNELGQLAAKLVKEWGDRALTLGELEDYIATAAEKTP 620
Query: 486 SMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLH 545
+ + + ++ + A++ S+ + EV +NE V GGLHVIGT H
Sbjct: 621 TKD----ENILAIRRAIH-----------SIKTEYEVITNNEEKLVTEAGGLHVIGTERH 665
Query: 546 ESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEG 605
ESRR+DNQLRGRAGRQGD GSTRF +SL+D + + F D L++ +EDMPIE
Sbjct: 666 ESRRVDNQLRGRAGRQGDFGSTRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIES 723
Query: 606 DAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQ 665
+ R L G Q E YY+ IRK + E+DEV+ QRK VY R+ +L G + Q+
Sbjct: 724 GMLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYSERRRVLKG--QELKSQVIS 781
Query: 666 YMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTL 717
Y + + EI+ ++ P W LDKL ++EFI + + G+ + L
Sbjct: 782 YGEKTMGEIVDAYINEELPPEEWELDKLVGKVQEFIYLLNDLKSSELIGLDTNQL 836
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 778 TNLLRKYLGDILIASYLNVVQESRYDDVY---MKEVERAVLVKTLDCFWRDHLINMNRLS 834
TN L+ +L + + +Y ++E++ ++ + M+E E+ +++ LD WR+HL +M+ L
Sbjct: 833 TNQLKVFLQEQMRNAY--DLKEAQLEETHPGIMREAEKFFMLQQLDTLWREHLQSMDSLR 890
Query: 835 SAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
+V +R +G ++PL EYK +G F+ M+ RR + S+ +
Sbjct: 891 ESVGLRGYGQKDPLIEYKNEGYDMFLEMMINFRRNVIYSMFMF 933
>gi|414076091|ref|YP_006995409.1| preprotein translocase subunit SecA [Anabaena sp. 90]
gi|413969507|gb|AFW93596.1| preprotein translocase subunit SecA [Anabaena sp. 90]
Length = 926
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 335/749 (44%), Positives = 449/749 (59%), Gaps = 77/749 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+ GG +LH G IAEMKT V+TVNDYLA+RDA
Sbjct: 77 LRHFDVQLQGGIILHTGQIAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P ER+ NY CDITY NSE+GFDYLRDN+A + ++V
Sbjct: 137 EWMGQVHRFLGLSVGLIQSTMTPSERQKNYECDITYVTNSEIGFDYLRDNMATSMAEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F ++DEVDS+L+DE R PL+ISG+ + +Y AA++A L + HY V K
Sbjct: 197 R---PFNFCVIDEVDSILVDEARTPLIISGQVERPTEKYLQAAEIAFSLKKDEHYEVNEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ +V LT+EG A +E L DL+D DPWA F+ NA+KAKE + +DV YIVRN + +I+
Sbjct: 254 DRNVLLTDEGFAESENQLGVTDLFDPEDPWAHFMFNAIKAKELFLKDVNYIVRNDEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LYPKL GMTGTAKT
Sbjct: 314 DEFTGRVLPGRRWSDGLHQAIEAKEHVEIQPETQTLATITYQNLFLLYPKLGGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K+++ V +PTN R DL F T GKW +E M GRPVLVG+
Sbjct: 374 EEVEFEKIYKREVTIIPTNRIRRREDLSDMVFKTEPGKWGAIAKECAEMHENGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ IPH +LNARP+ REAE +AQAGR A+TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLKEMEIPHELLNARPENVEREAEIIAQAGRSGAVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLS----EIKLGSSSLALLAKA 453
LGGN + +A+ + + + P+++S E + +S + +
Sbjct: 494 LGGNSEYMARLKLREYFM------------------PRIVSPEDDEFGVQRASGLPMGGS 535
Query: 454 ALLAKYVGKAEGKSW--------------TYQEAKSFFSESVEMSQSMNLKELQKLIDKQ 499
+V + K+W T Q K+ +V+ +L EL+ +K
Sbjct: 536 GGGQGFVPGKKVKTWRASPEIFPTQLRKETEQLLKAAVEVAVKAYGERSLPELEAE-EKV 594
Query: 500 SAMYPLGPTVAL-------TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDN 552
+ PT L Y + + E E +V GGLHVIGT HESRRIDN
Sbjct: 595 AVAAEKAPTDDLVIQKLREAYQQIKHEYEEFTVREHDDVVNRGGLHVIGTERHESRRIDN 654
Query: 553 QLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQL 612
QLRGRAGRQGDPG+TRF +SL+D + + F D L++ +EDMPIE + R L
Sbjct: 655 QLRGRAGRQGDPGTTRFFLSLEDNLLRIFGGDR--VAGLMNAFQVEEDMPIESGMLTRSL 712
Query: 613 LGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
G Q E YY+ IRK + E+DEV+ QR+ +Y R+ +L G + +Q+ +Y + +D
Sbjct: 713 EGAQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIKYAEKTMD 770
Query: 673 EIIFGNVDPLKHPRYWSLDKL---LKEFI 698
+I+ ++P W L+KL +KEF+
Sbjct: 771 DIVDYYINPDLPSEEWELEKLVDKVKEFV 799
>gi|78780117|ref|YP_398229.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9312]
gi|123553661|sp|Q318A2.1|SECA_PROM9 RecName: Full=Protein translocase subunit SecA
gi|78713616|gb|ABB50793.1| protein translocase subunit secA [Prochlorococcus marinus str. MIT
9312]
Length = 943
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 347/779 (44%), Positives = 464/779 (59%), Gaps = 81/779 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+ IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHECQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P +R+ NY CDITY NSELGFDYLRDN++ + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMSPVQRKKNYDCDITYATNSELGFDYLRDNMSTDINEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y A+++A LV+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKASELALALVKAKEIGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E L +DL++ DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDQGFAKCEEYLAVSDLYNPKDPWAHYITNALKAKELFIKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++N +A+I++E TGRV RRWS+G HQA+EAKE LKIQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIIKNNEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLKIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ +PTN R DLP Q F T GKW+ +E +
Sbjct: 381 GLAGMTGTAKTEEVEFEKTYKLESTVIPTNQIRKREDLPDQVFKTEIGKWKAVARETAQI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRAGRPVLVGTTSVEKSELLSSLLAEEKIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ +++ L+ LL + + P + + S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLKEILIPLLVKP-------NNEHKPPIPKQRSSKSKG 553
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK-LIDKQSAMYPL 505
+ L K + ++ E ++ S+ EL K D+Q ++ L
Sbjct: 554 GFSSKVGSNLTKNI-----PDYSTSLFPCKLDEEIQKKLSVLSDELVKNWGDRQLSVLDL 608
Query: 506 GPTVALTY----------------LSVLKD-CEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
+A LS +KD E ++E +V+ +GGLHVIGT HESR
Sbjct: 609 DDRIATAAEKAPTEDKMIKLLRESLSRVKDEYEKVLTHEEKKVREVGGLHVIGTERHESR 668
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
R+DNQLRGRAGRQGD GSTRF +SL+D + + F + +L++ DEDMPIE +
Sbjct: 669 RVDNQLRGRAGRQGDFGSTRFFLSLEDNLLRIFGGER--VANLMNAFRVDEDMPIESGML 726
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
R L Q E YY+ IRK + E+DEV+ QRK VY R +L G + +Q+ Y +
Sbjct: 727 TRSLESAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYSERLRVLQGTD--LKRQVIGYGE 784
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEEL 724
+ EI+ ++P P W + +L+ KEFI +LDDL A D L SIEEL
Sbjct: 785 RTMYEIVEAYINPDLPPEEWDIAQLISKVKEFIY----LLDDLKA---DDVKLLSIEEL 836
>gi|194476952|ref|YP_002049131.1| preprotein translocase, SecA subunit [Paulinella chromatophora]
gi|171191959|gb|ACB42921.1| preprotein translocase, SecA subunit [Paulinella chromatophora]
Length = 943
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 346/778 (44%), Positives = 468/778 (60%), Gaps = 77/778 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IG VLHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 87 MRHFDVQLIGAMVLHDGQIAEMKTGEGKTLVATLPTYLNALAGKGVHVVTVNDYLARRDA 146
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGLSVGL+Q+ M ER+ NY CDITY NSELGFDYLRDN+A ++ ++V
Sbjct: 147 EWMGQVYRFLGLSVGLVQQNMSISERQHNYNCDITYITNSELGFDYLRDNMANSTSEVVQ 206
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R P ++AI+DEVDS+LIDE R PL+ISG+ + +Y AA VA +L +
Sbjct: 207 RNP---YYAILDEVDSILIDEARTPLIISGQVDRPQDKYQRAAYVATVLERSAEMGKDGI 263
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K +V LT+EG AE L DL+D DPWA +V NA+KAKE + +DV
Sbjct: 264 DPDGDYEVDEKQRNVTLTDEGYYKAESLLNIRDLFDPEDPWAHYVTNAIKAKELFIKDVN 323
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR G+ +I++E TGRV RRWS+G HQA+EAKE L IQ+++ +A I+YQ+ F LYP
Sbjct: 324 YIVRKGQVVIVDEFTGRVMPGRRWSDGQHQAIEAKEKLSIQSETQTLASISYQNFFLLYP 383
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+ SGMTGTAKTEE EF K +++ VI +PTN P R DL + + T KW E+ +
Sbjct: 384 RFSGMTGTAKTEEVEFEKTYKVEVITIPTNQPRSRTDLMDKVYKTESAKWRAVAAEITEI 443
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+GRPVLVG+TSVE SE LSDLL +Q I HN+LNA+P+ REAE +AQAGR A+TI+
Sbjct: 444 HSIGRPVLVGTTSVEKSEVLSDLLAKQQIRHNLLNAKPENVEREAEIIAQAGRAGAVTIA 503
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ + + LL L + + D K S +E+K+ +
Sbjct: 504 TNMAGRGTDIILGGNSDYMARLKVREVLLPRLVK--FEKQQDSKESKE---AEVKIIPNH 558
Query: 447 LALL----AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEM---SQSMNLKELQKLIDKQ 499
A+L ++ Y S Q+A S +E + + +N EL+ I +
Sbjct: 559 TAILNDMSENKSINTPYPCPL---SEVTQKALSDLAEDLVNFWGDRKLNALELEDRIIQA 615
Query: 500 SAMYPL-GPTVAL----------TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
+ P P +A Y SV+K E C V+ +GGLHVIGT HESR
Sbjct: 616 AEKAPAEDPQIAQLRILIARIRNEYDSVVK-YEERC------VREVGGLHVIGTERHESR 668
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
R+DNQLRGRAGRQGDPGSTRF +SL+D + + F + L+ +ED+PI+ +
Sbjct: 669 RVDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGER--IASLMDAFRVEEDIPIQSGML 726
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
R L Q E +++ IRK L E+DEV+ QRK VY R+ +L G + +Q+ +Y +
Sbjct: 727 NRSLESAQKKVETHHYDIRKQLFEYDEVMNKQRKAVYAERRRVLEG--QDLKKQVIEYGE 784
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+DEI+ ++ P W+L++L +KEFI + + + G+S D L ++E
Sbjct: 785 RTIDEIVEAYINLDLPPDKWNLEQLVSKVKEFIFVLEYLTPEQLVGLSMDQLKAFLQE 842
>gi|356499293|ref|XP_003518476.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like
[Glycine max]
Length = 1012
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 362/910 (39%), Positives = 503/910 (55%), Gaps = 119/910 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 143 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLNALSGKGVHVVTVNDYLARRDC 202
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M ++R+ NY CDITY NSELGFDYLRDNLA + E LV+
Sbjct: 203 EWVGQVPRFLGLKVGLIQQNMTSQQRKENYSCDITYVTNSELGFDYLRDNLATSVEDLVI 262
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ I+DEVDS+LIDE R PL+ISG A K +Y AAK+AE Q +HYTV+ K
Sbjct: 263 RG---FNYCIIDEVDSILIDEARTPLIISGPAEKPSDQYYKAAKIAEAFEQDIHYTVDEK 319
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V L+E+G AE L DL+D + WA +++NA+KAKE + RDV YI+R + LI+
Sbjct: 320 QKTVLLSEQGYEDAEEILAVKDLYDPREQWASYILNAIKAKELFLRDVNYIIRGKEVLIV 379
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 380 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 439
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GRPVLVG+
Sbjct: 440 ESTEFESIYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGRPVLVGT 499
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS+ LK+ GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 500 TSVEQSDSLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 559
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSP-------KVLSEIKLGSSSLALL 450
LGGN + +A+ + + L+ + + + V K P + L +L + ++ +
Sbjct: 560 LGGNAEFMARLKLREILMPRVVKPSEEGFVSIKKPPPSKTWKVNEKLFPCQLSNKNVDMA 619
Query: 451 AKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
KA LA + GK +S T EA+ S + E + + + + KL +
Sbjct: 620 EKAVQLAVETWGK---RSLTELEAEERLSYTCEKGPAQD-EVIAKLRN------------ 663
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L + K+ +V E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 664 --AFLEIGKEYKVFTEEERKKVVEAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 721
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + + R ED+PIE + + L Q E Y+F IRK
Sbjct: 722 FLSLEDNIFRIFGGDR---IQGLMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRK- 777
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
Q+F+Y DE++ D + R +
Sbjct: 778 --------------------------------QLFEY-----DEVLNSQRDRVYTERRRA 800
Query: 690 L--DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
L D L I A +DD+ G K +L +L + I + + P+L
Sbjct: 801 LESDNLQSLLIEYAELTMDDILEANIGSDAPKDSWDLEKLTA-KIQQYCYLLNTLSPDLL 859
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
L+ +L R R L+K ++V++ M
Sbjct: 860 GNTCSDYEELRNYL-----------RLRGREAYLQKR----------DIVEQQAAG--LM 896
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ R
Sbjct: 897 KEAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIR 956
Query: 868 RLTVESLVQY 877
R + S+ Q+
Sbjct: 957 RNVIYSVYQF 966
>gi|416403829|ref|ZP_11687601.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Crocosphaera watsonii WH 0003]
gi|357261646|gb|EHJ10891.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Crocosphaera watsonii WH 0003]
Length = 934
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 332/753 (44%), Positives = 453/753 (60%), Gaps = 62/753 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHQGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ GM PEER+ NY CD+TYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSGMNPEERKKNYACDVTYTTNSELGFDYLRDNMATAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV------QGLH 151
R P ++ I+DEVDS+LIDE R PL+ISG+ + +Y AA++A+ L
Sbjct: 204 RPP---NYCIIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAKKLELQENEEDPKD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T++G AE L DL+D+ +PWA ++ NA+KAKE + +DV YIV+N
Sbjct: 261 YEVDEKARNVLMTDQGFENAEQLLGVTDLYDQENPWAHYIFNAIKAKELFTKDVNYIVKN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG+ IQ ++ +A ITYQ+ F LY KLSGM
Sbjct: 321 KEVVIVDEFTGRVLAGRRWSDGLHQAIEAKEGVPIQKETQTLATITYQNFFLLYNKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN P R D + KW+ EVE + GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRPPQRYDYADVVYKNEIAKWKAVAAEVEELHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE +S+LL+Q IPHN+LNARP+ RE+E VAQAGR+ A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSEVISNLLQQSNIPHNILNARPENVERESEIVAQAGRQQAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDIILGGN +A+ I + L+ + + DD + GS
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLMPQIV-----MPEDDNLMAGGTGGN---GSRRPQGFG 552
Query: 452 KAALLAKYVGKAE-GKSWTYQEAKSFFSESVEMS------QSMNLKELQKLIDKQSAMYP 504
+ + K+ A+ + QE ++ +V+ + QS++ E ++ I S P
Sbjct: 553 EDSKKKKWQPSADIFPTQLSQETENLIKVAVKFAVTEYGQQSLSELEAEEKIAIASENAP 612
Query: 505 LGPTVA----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
V Y ++ ++ + E EV GGLHVI T HESRRIDNQLRGRAGR
Sbjct: 613 TDDPVIEKLREVYKAIREEYDALTDKEQEEVVEKGGLHVIATERHESRRIDNQLRGRAGR 672
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGST+F +SL+D + + F D L+ +EDMPIE + R L G Q E
Sbjct: 673 QGDPGSTKFFLSLEDNLLRIFGGDRVSG--LMEAFRVEEDMPIESKMLTRSLEGAQKKVE 730
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
+Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +DEI+ V+
Sbjct: 731 TFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYAEKTMDEIVDAYVN 788
Query: 681 PLKHPRYWSLDKL---LKEFIAIAGKILDDLFA 710
P P W + L +KEF+ +L+D+ A
Sbjct: 789 PELPPEEWDVGNLVSKVKEFVY----LLEDMTA 817
>gi|67924440|ref|ZP_00517865.1| SecA protein [Crocosphaera watsonii WH 8501]
gi|67853701|gb|EAM49035.1| SecA protein [Crocosphaera watsonii WH 8501]
Length = 934
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 332/753 (44%), Positives = 453/753 (60%), Gaps = 62/753 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGMVLHQGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGL+VGLIQ GM PEER+ NY CD+TYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLTVGLIQSGMNPEERKKNYACDVTYTTNSELGFDYLRDNMATAMAEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV------QGLH 151
R P ++ I+DEVDS+LIDE R PL+ISG+ + +Y AA++A+ L
Sbjct: 204 R---PSNYCIIDEVDSILIDEARTPLIISGQVERPTEKYLQAAEIAKKLELQENEEDPKD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T++G AE L DL+D+ +PWA ++ NA+KAKE + +DV YIV+N
Sbjct: 261 YEVDEKARNVLMTDQGFENAEQLLGVTDLYDQENPWAHYIFNAIKAKELFTKDVNYIVKN 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EAKEG+ IQ ++ +A ITYQ+ F LY KLSGM
Sbjct: 321 KEVVIVDEFTGRVLAGRRWSDGLHQAIEAKEGVPIQKETQTLATITYQNFFLLYNKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE E K++ + V VPTN P R D + KW+ EVE + GR
Sbjct: 381 TGTAKTEETELEKVYNLQVTIVPTNRPPQRYDYADVVYKNEIAKWKAVAAEVEELHEQGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+TSVE SE +S+LL+Q IPHN+LNARP+ RE+E VAQAGR+ A+TI+TNMAG
Sbjct: 441 PILVGTTSVEKSEVISNLLQQSNIPHNILNARPENVERESEIVAQAGRQQAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDIILGGN +A+ I + L+ + + DD + GS
Sbjct: 501 RGTDIILGGNSDYMARLKIREYLMPQIV-----MPEDDNLMAGGTGGN---GSRRPQGFG 552
Query: 452 KAALLAKYVGKAE-GKSWTYQEAKSFFSESVEMS------QSMNLKELQKLIDKQSAMYP 504
+ + K+ A+ + QE ++ +V+ + QS++ E ++ I S P
Sbjct: 553 EDSKKKKWQPSADIFPTQLSQETENLIKVAVKFAVTEYGQQSLSELEAEEKIAIASENAP 612
Query: 505 LGPTVA----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
V Y ++ ++ + E EV GGLHVI T HESRRIDNQLRGRAGR
Sbjct: 613 TDDPVIEKLREVYKAIREEYDALTDKEQEEVVEKGGLHVIATERHESRRIDNQLRGRAGR 672
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGST+F +SL+D + + F D L+ +EDMPIE + R L G Q E
Sbjct: 673 QGDPGSTKFFLSLEDNLLRIFGGDRVSG--LMEAFRVEEDMPIESKMLTRSLEGAQKKVE 730
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
+Y+ RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + +DEI+ V+
Sbjct: 731 TFYYDTRKQVFEYDEVMNNQRRAIYAERRRVLEGLD--LKEQVLQYAEKTMDEIVDAYVN 788
Query: 681 PLKHPRYWSLDKL---LKEFIAIAGKILDDLFA 710
P P W + L +KEF+ +L+D+ A
Sbjct: 789 PELPPEEWDVGNLVSKVKEFVY----LLEDMTA 817
>gi|412988627|emb|CCO17963.1| preprotein translocase subunit SecA [Bathycoccus prasinos]
Length = 1023
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 362/924 (39%), Positives = 507/924 (54%), Gaps = 139/924 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RD
Sbjct: 151 LRPFDVQVIGGVILHEGQIAEMRTGEGKTLVSALPAYLNALSGKGVHVVTVNDYLAKRDM 210
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLGLSVGLIQ M +ERRS Y D+TY NSELGFDYLRDNLA E LV+
Sbjct: 211 EWIGQIHKFLGLSVGLIQANMSEQERRSGYSKDVTYVTNSELGFDYLRDNLAQVPEDLVL 270
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F I+DEVDS+LIDE R PL+ISG A K RY AAK+A+ + +HYTV+ K
Sbjct: 271 R---EFNFCIIDEVDSILIDEARTPLIISGVADKPSERYVQAAKIADAFQKSVHYTVDEK 327
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV+LTEEG AE L+ +DL+D WA +++NA+KAKE +DV YIVR + +I+
Sbjct: 328 QKSVQLTEEGYEAAEDLLDVDDLYDPRTQWALYIINAIKAKELQLKDVNYIVRGQEIIIV 387
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR + RRWS+G+HQAVEAKEG+ IQ ++V +A +TYQ+ F+ +PKL GMTGTA+T
Sbjct: 388 DEFTGRTMQGRRWSDGLHQAVEAKEGVTIQNETVTIASVTYQAFFRTFPKLGGMTGTAET 447
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V VPTN R D F + GKW R+E+ M + GRPVLVG+
Sbjct: 448 ELTEFDKIYDLSVQVVPTNRSVSREDATDVVFRSESGKWNAVRREIARMHKKGRPVLVGT 507
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE ++ LL + GI + +LNA+P+ RE+E VAQ+GRK A+TI+TNMAGRGTDI+
Sbjct: 508 TSVERSEAIARLLDEDGIAYELLNAKPENVERESEIVAQSGRKGAVTIATNMAGRGTDIL 567
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ L REAL PK+ +K LA K L
Sbjct: 568 LGGNAEFMAR---------LRVREAL---------LPKI---VKPEDGDLAFEKKGNL-- 604
Query: 458 KYVGKAEGKSWTYQ----------EAKSFFSESVEMS------QSMNLKELQKLIDKQSA 501
GKA+ W + EA + + +VE + +S+ + E + D+ S
Sbjct: 605 ---GKAKENKWKVKDGLYPCDISSEASAALANAVEKAIANWGERSLEILEAE---DRLSF 658
Query: 502 MYPLGPTVALTYLSVLK-------DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
GPT +L++ + E E EV +LGGLHV+GT HESRR+DNQL
Sbjct: 659 ACEKGPTDDEAFLAIRDAFTKIEGEFETFTKKEKEEVLQLGGLHVVGTERHESRRVDNQL 718
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGR+GRQGDPGSTR+ +SL+D +F+ F D + + R+ EDMPIE + L
Sbjct: 719 RGRSGRQGDPGSTRYFLSLEDNLFRIFGGDKIQNMMSMFRV---EDMPIESGMLTASLDS 775
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E Y++ IRK L ++D+VL QR+ VY R+ L ++
Sbjct: 776 AQTKVETYFYDIRKQLFDYDQVLNSQREKVYFERRKALKSSD------------------ 817
Query: 675 IFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINN 734
DKL + + + K +DD+ +ID +
Sbjct: 818 ----------------DKLKEVMLEYSEKTIDDIVKA-----------------NIDTS- 843
Query: 735 FYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYL 794
+P G+ K + + + ++D+ + + LR YL +YL
Sbjct: 844 -----VPVAEWPLDGLASKCAQYCKLMNDLTEDVLRAEASKGGVEGLRNYLVKRGKDAYL 898
Query: 795 NVVQE-SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
E M E ER ++ D W++HL + + AV +R + ++PL EYK+
Sbjct: 899 QKRGEIEALQPGLMTEAERYFVLSQTDNLWKEHLQAIKFVQQAVGLRGYAQKDPLIEYKL 958
Query: 854 DGCRFFISMLSATRRLTVESLVQY 877
+G F+ M++ RR + S+ Q+
Sbjct: 959 EGYNLFVEMMAQIRRNVIYSVYQF 982
>gi|427725540|ref|YP_007072817.1| protein translocase subunit secA [Leptolyngbya sp. PCC 7376]
gi|427357260|gb|AFY39983.1| protein translocase subunit secA [Leptolyngbya sp. PCC 7376]
Length = 939
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 327/745 (43%), Positives = 447/745 (60%), Gaps = 48/745 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLLGGIVLHKGQIAEMRTGEGKTLVATLPSYLNGLTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ M P E+ NY CDITYT NSELGFDYLRDN+A ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQNAMGPAEKIENYNCDITYTTNSELGFDYLRDNMATAMSEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV-----QGL-H 151
R PF++ ++DEVDS+LIDE R PL+ISG+ + +Y AA++A L+ G+
Sbjct: 204 R---PFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYMQAAEIARQLIPQEEEDGIGD 260
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
Y V+ K +V +T+EG A AE L NDL+D ++PWA ++ NA+KAKE ++RDV Y+VR
Sbjct: 261 YEVDEKARNVLMTDEGFAKAEQLLGVNDLYDSDNPWAHYIFNAVKAKELFKRDVNYMVRG 320
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
+ +I++E TGRV RRWS+G+HQA+EA+E + IQ ++ +A ITYQ+ F LYPKLSGM
Sbjct: 321 EEVMIVDEFTGRVMPGRRWSDGLHQAIEAQENVPIQKETQTLANITYQNFFLLYPKLSGM 380
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTAKTEE EF K++ + V +PTN R D + + KW+ +E + GR
Sbjct: 381 TGTAKTEETEFEKVYNLEVTIIPTNRTIARQDWSDVVYKNEQAKWKAVAEEAAEEHKKGR 440
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE +S+ L++ +PHN+LNARP+ +E+E VAQAGRK A+TI+TNMAG
Sbjct: 441 PVLVGTTSVEKSEVVSNYLQELEVPHNLLNARPENVEKESEIVAQAGRKGAVTIATNMAG 500
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTR-EALNVEVDDKTSSPKVLSEIKLGSSSLALL 450
RGTDIILGGN + +A+ + + + ++ R E + + + +
Sbjct: 501 RGTDIILGGNAEYMARLKMREYFMPMIVRPEDDQIVAGGRGNGSGGGQGFDANAPKKKKK 560
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVA 510
L Y + G++ + F+ S Q++ E ++ + S P V
Sbjct: 561 TWKTTLDIYPTELSGETEKMLKDAVKFAVSKYGEQNLTELEAEEKLAIASENAPTDDPVI 620
Query: 511 LTYLSVLKDCEVH----CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
V K E E EV + GGLHV+GT HESRRIDNQLRGRAGRQGDPGS
Sbjct: 621 QKLREVYKAIESTYVSLTGAEHDEVIQNGGLHVMGTERHESRRIDNQLRGRAGRQGDPGS 680
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
TRF +SL+D + + F D L++ +EDMPIE + L G Q E +Y+
Sbjct: 681 TRFFLSLEDNLLRIFGGDR--VAGLMNAFRVEEDMPIESKMLTGSLEGAQKKVETFYYDA 738
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK + E+DEV+ QR+ +Y R+ +L G + +Q+ QY + + EI+ V+ P
Sbjct: 739 RKQVFEYDEVMNNQRRAIYAERRRVLEG--QDLKEQVIQYAEKTMSEIVDAYVNQDLPPE 796
Query: 687 YWSLDKLL---KEFIAIAGKILDDL 708
W LDKLL KEF+ +L+DL
Sbjct: 797 EWKLDKLLDKSKEFVY----LLEDL 817
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M++ ER +++ +D WR+HL ++ L +V +R +G ++PL EYK +G F+ M+
Sbjct: 857 MRQAERFFILQQIDTLWREHLQAIDALRESVGLRGYGQKDPLIEYKQEGYEMFLEMMIDI 916
Query: 867 RRLTVESL 874
RR V SL
Sbjct: 917 RRNVVYSL 924
>gi|124021864|ref|YP_001016171.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9303]
gi|166918846|sp|A2C5Z6.1|SECA_PROM3 RecName: Full=Protein translocase subunit SecA
gi|123962150|gb|ABM76906.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 951
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 344/772 (44%), Positives = 457/772 (59%), Gaps = 57/772 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G I EMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIGEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMSPAERRRNYACDITYATNSELGFDYLRDNMATDLSEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA VA L +
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAADVAAALERAAEQGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L+ DL+D DPWA ++ NALKAKE + RDV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQNLKVRDLFDPADPWAHYITNALKAKELFVRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEQLAIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ +PTN P R D Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETSVIPTNQPRARADWVDQVYKTESAKWRAVANETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HKQGRPVLVGTTSVEKSELLSSLLSEQEIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR--EALNVEVDDKTSSPKVLSEIKLGS 444
TNMAGRGTDIILGGN +A+ + + LL L R E V + ++ +
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRPEEGHRPPVPLQRAAETGGGFAAKAA 560
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSE------SVEMSQSMNLKELQKLIDK 498
+S A+ +G S T + F +E V +++++ EL+ I
Sbjct: 561 ASNGSHGHVLSEARAIGSLYPCSLT-DDTDQFLAELARELVKVWGDRALSVIELEDRIST 619
Query: 499 QSAMYPL--GPTVAL--TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
+ P AL + V + +V + E V+ GGLHVIGT HESRR+DNQL
Sbjct: 620 AAEKAPTDDAQIAALRESIARVKTEYDVVVTQEEVRVREAGGLHVIGTERHESRRVDNQL 679
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGD GSTRF +SL+D + + F + L++ +EDMPIE + R L G
Sbjct: 680 RGRAGRQGDLGSTRFFLSLEDNLLRIFGGER--VASLMNAFRVEEDMPIESGMLTRSLEG 737
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E YY+ IRK + E+DEV+ QR+ VY R+ +L G +Q+ Y + +D++
Sbjct: 738 AQKKVETYYYDIRKQVFEYDEVMNNQRRAVYAERRRVLEG--RGLKKQVIGYGERTMDDV 795
Query: 675 IFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+ V+P P W LD+L ++EF+ + + + G+S + L ++E
Sbjct: 796 VEAYVNPDLPPEEWDLDQLVSKVQEFVYLLEDLKPEQLQGLSMEELKSFLQE 847
>gi|255085062|ref|XP_002504962.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226520231|gb|ACO66220.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 1015
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/719 (44%), Positives = 436/719 (60%), Gaps = 42/719 (5%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RD
Sbjct: 129 LRPFDVQLIGGMILHEGQIAEMRTGEGKTLVSALPAFLNALGGKGVHVVTVNDYLARRDC 188
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLGL GLIQ GM ERR NY CD+TY NSELGFDYLRDNLA +LV+
Sbjct: 189 EWIGQIHKFLGLKCGLIQAGMAEAERRENYLCDVTYVTNSELGFDYLRDNLAQTPAELVL 248
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F ++DEVDS+LIDE R PL+ISG A K RY +AK+A+ L + HY V+ K
Sbjct: 249 R---DFNFCVIDEVDSILIDEARTPLIISGMADKPSERYIQSAKIADALERDYHYKVDEK 305
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
S+ TEEG E L+ DL+D WA +++NALKAKE +DV YIV+ G+ +I+
Sbjct: 306 QKSILFTEEGYEACEELLQVTDLYDPRTQWALYIINALKAKELQLKDVNYIVKGGEVVIV 365
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQAVEAKEGL IQ ++V +A +TYQ+ F+ +PKL GMTGTA+T
Sbjct: 366 DEFTGRTMVGRRWSDGLHQAVEAKEGLTIQNETVTIASVTYQAFFRAFPKLGGMTGTAET 425
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++ + V VPTN R D F + GKW R E+ M + GRPVLVG+
Sbjct: 426 ELTEFNNIYDLSVAVVPTNREVKRDDAEDVVFRSESGKWNAVRTEIARMHKKGRPVLVGT 485
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE + +LL + GIP+ +LNA+P+ REAE VAQAGR+ A+TI+TNMAGRGTDI+
Sbjct: 486 TSVERSEQIGELLDEDGIPYELLNAKPENVEREAEIVAQAGRRGAVTIATNMAGRGTDIL 545
Query: 398 LGGNPKMLAKKIIEDRLL--LLLTREA-LNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
LGGN + +A+ I + L+ +++ E + E + + ++K G L A+A
Sbjct: 546 LGGNAEFMARLRIREALMPRIVMPEEGDIAFEKKNIGGANADRWKVKDGLYPCDLSAEAE 605
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYL 514
L + A SW A+S E +E + ++ + + ++A+ + +
Sbjct: 606 KLVQEAVDAAVASWG---ARSV--EKLEAEERLSFACEKAPTEDEAAL-----KIRAAFN 655
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
V + E E EV LGGLHV+GT HESRR+DNQLRGRAGRQGDPGSTR+ +SL+
Sbjct: 656 KVEAEFEAVTKTEKVEVVGLGGLHVVGTERHESRRVDNQLRGRAGRQGDPGSTRYFLSLE 715
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D +F+ F + A+ RI EDMPIE + + L Q E Y++ IRK L ++D
Sbjct: 716 DNLFRIFGGERIQALMSAFRI---EDMPIESGMLTQSLDQAQKKVETYFYDIRKQLFDYD 772
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
VL QR+ +Y R+ L Q + +Y + VD+I+ N+D P W L+ L
Sbjct: 773 AVLNSQREKLYFERRRALAATPAQLEQLMLEYAEQTVDDIVQANLDTSVDPAEWPLEGL 831
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M E ER ++ D W++HL + + AV +R + ++PL EYK++G F+ M++
Sbjct: 889 MGEAERFFVLSQTDNLWKEHLQAIKFVQQAVGLRGYAQKDPLIEYKLEGYNLFVEMMAQI 948
Query: 867 RRLTVESLVQYW-----SSPMESQ 885
RR + S+ Q+ +P E+Q
Sbjct: 949 RRNVIYSVYQFQPKRVKENPPEAQ 972
>gi|2500724|sp|Q41062.1|SECA_PEA RecName: Full=Protein translocase subunit SecA, chloroplastic;
Flags: Precursor
gi|1122325|emb|CAA57798.1| chloroplast SecA protein [Pisum sativum]
Length = 1011
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 334/728 (45%), Positives = 444/728 (60%), Gaps = 62/728 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 143 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRDC 202
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLG+ VGLIQ+ M E+++ NY CDITY NSELGFD+LRDNLA + E+LV+
Sbjct: 203 EWVGQVPRFLGMKVGLIQQNMTSEQKKENYLCDITYVTNSELGFDFLRDNLATSVEELVI 262
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+A+ + +HYTV+ K
Sbjct: 263 RG---FNYCVIDEVDSILIDEARTPLIISGPAEKSSDQYFKAAKIADAFERDIHYTVDEK 319
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV L+E+G AE L DL+D + WA FV+NA+KAKE + RDV YI+R + LI+
Sbjct: 320 QKSVLLSEQGYEDAEEILAVKDLYDPREQWASFVINAIKAKELFLRDVNYIIRGKEVLIV 379
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 380 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 439
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GRPVLVG+
Sbjct: 440 EITEFESIYKLKVTIVPTNKPMIRKDESDVVFRATTGKWRAVVVEISRMNKTGRPVLVGT 499
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS LK+ GI H VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 500 TSVEQSDSLSQQLKEAGILHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 559
Query: 398 LGGNPKMLA----KKIIEDRLLLLLTR-EALNVEVDDKTSSPKV---LSEIKLGSSSLAL 449
LGGN + +A ++I+ R++ L+ E ++V+ + + KV L +L + + L
Sbjct: 560 LGGNAEFMARLKLREIMMPRVVKLVAEGEFVSVKKPPPSKTWKVNEKLFPCQLSNQNTEL 619
Query: 450 LAKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSAMYPLG 506
KA LA K GK +S T EA+ S S E +Q + EL+
Sbjct: 620 AEKAVQLAVKTWGK---RSLTELEAEERLSYSCEKGPAQDEVIAELRN------------ 664
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
+L + K+ +V E +V GGLHV+GT HESRRIDNQLRGR+GRQGD GS
Sbjct: 665 -----AFLEISKEYKVFTEEERKKVVAAGGLHVVGTERHESRRIDNQLRGRSGRQGDLGS 719
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
+RF +SL+D +F+ F D + + R ED+PIE + + L Q E Y+F I
Sbjct: 720 SRFFLSLEDNIFRIFGGDR---IQGLMRAFRVEDLPIESQMLTKALDEAQKKVENYFFDI 776
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK L E+DEVL QR VY R+ L N + +Y + +D+I+ N+
Sbjct: 777 RKQLFEYDEVLNSQRDRVYTERRRALQSVN--LQSLLIEYAELTIDDILEANIGSDAPKE 834
Query: 687 YWSLDKLL 694
W LDKL+
Sbjct: 835 SWDLDKLI 842
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
MKE ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++
Sbjct: 897 MKEAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQI 956
Query: 867 RRLTVESLVQY 877
RR + S+ Q+
Sbjct: 957 RRNVIYSIYQF 967
>gi|302832720|ref|XP_002947924.1| hypothetical protein VOLCADRAFT_57571 [Volvox carteri f.
nagariensis]
gi|300266726|gb|EFJ50912.1| hypothetical protein VOLCADRAFT_57571 [Volvox carteri f.
nagariensis]
Length = 1007
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/733 (43%), Positives = 449/733 (61%), Gaps = 63/733 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RD+
Sbjct: 146 LRPFDVQLIGGMILHEGQIAEMRTGEGKTLVAVLPAYLNALTGRGVHVVTVNDYLARRDS 205
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +VHRFLGL+VGLIQ + PE R++ + CD+TY NSELGFDYLRDNLAA + +LV+
Sbjct: 206 EWVGQVHRFLGLTVGLIQADLKPEARKAAHSCDVTYVTNSELGFDYLRDNLAAAASELVL 265
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ ++DEVDS+LIDE R PL+ISG + K ++Y AAK+A+ L + +HYTV+ K
Sbjct: 266 REDTPFNYCVIDEVDSILIDEARTPLIISGMSDKPSSKYYKAAKIADALSRNVHYTVDEK 325
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G E L+ +DL+D WA +++NALKAKE ++V YIV+ + +I+
Sbjct: 326 QKAVLLTEDGYEAVEDVLQVSDLYDPRTQWASYIINALKAKELQIKNVNYIVKGSEVIIV 385
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQAVEAKEGL+IQ +++ +A ++YQ+ F+ +PKL+GMTGTA T
Sbjct: 386 DEFTGRTMPGRRWSDGLHQAVEAKEGLEIQNENITLASVSYQAFFRAFPKLAGMTGTAAT 445
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++PV VPTN R D P F + KW+ QE+ +M + GRPVLVG+
Sbjct: 446 EVSEFDSIYKLPVAVVPTNRTVSRKDNPDVVFRSVSYKWKAVVQEIRNMHKTGRPVLVGT 505
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS +L+++GI H VLNA+P+ RE+E VAQ+GRK A+TISTNMAGRGTDI+
Sbjct: 506 TSVEKSEILSAMLQEKGIAHQVLNAKPENVERESEIVAQSGRKGAVTISTNMAGRGTDIL 565
Query: 398 LGGNPKMLAKKIIEDRLLLLLTRE-------ALNVEVDDKTSSPKVLSEIKLGSSSLALL 450
LGGN +A+ + + L+ + E + V V ++P + L
Sbjct: 566 LGGNADYMARLKLREMLMPEVRGEKGVRGVRCVYVYVRTWAANPALF--------PCTLS 617
Query: 451 AKAALLAKYVGKAEGKSWTYQ-----EAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPL 505
+ LA+ A +W + EA+ S + E + ++ +L KL D AM
Sbjct: 618 ERTQSLAESAVAAAVAAWGCRQLSELEAEDRLSVACEKGFTEDV-QLLKLRDAFQAM--- 673
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
L + + E +EV LGGLHVIGT HESRRIDNQLRGR+GRQGDPG
Sbjct: 674 -----------LSEYKAVTEVEKAEVVALGGLHVIGTERHESRRIDNQLRGRSGRQGDPG 722
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
STRF +SL+D +F+ F D + + ++ ED+P+E + L Q E Y+F
Sbjct: 723 STRFFLSLEDALFRVFGGDRIKNLMVAFQV---EDLPMESTMLSDALDTAQKRVEAYFFD 779
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRK+L ++D+V+ QR +Y + + + +Y + D+I+ NVD K P
Sbjct: 780 IRKNLFDYDQVVNTQRDKIYS--ERRRALLAADLAPLMREYAEKTADDILEANVDRTKEP 837
Query: 686 RYWSLDKLLKEFI 698
W LD L ++ +
Sbjct: 838 SEWRLDDLARKMV 850
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M EV++ ++ D W++HL + L AV +R + ++PL E+K++G F+ M +
Sbjct: 903 MSEVQKFFVLSQTDAKWKEHLQAIKFLQQAVGLRGYASKDPLTEFKLEGYNLFVDMTAQI 962
Query: 867 RR 868
RR
Sbjct: 963 RR 964
>gi|33862356|ref|NP_893916.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9313]
gi|81712748|sp|Q7V975.1|SECA_PROMM RecName: Full=Protein translocase subunit SecA
gi|33640469|emb|CAE20258.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 948
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 343/772 (44%), Positives = 455/772 (58%), Gaps = 57/772 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G I EMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIGEMKTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMSPAERRRNYACDITYATNSELGFDYLRDNMATDLSEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA VA L +
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAADVAAALERAAEQGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE L DL+D DPWA ++ NALKAKE + RDV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQNLRVRDLFDPADPWAHYITNALKAKELFVRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEQLAIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ +PTN P R D Q + T KW E +
Sbjct: 381 RLAGMTGTAKTEEVEFEKTYKLETSVIPTNQPRARADWVDQVYKTESAKWRAVANETAEI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL +Q IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HKQGRPVLVGTTSVEKSELLSSLLSEQEIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR--EALNVEVDDKTSSPKVLSEIKLGS 444
TNMAGRGTDIILGGN +A+ + + LL L R E V + ++ +
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLPRLVRPEEGHRPPVPLQRAAETGGGFAAKAA 560
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSE------SVEMSQSMNLKELQKLIDK 498
+S A+ +G S T + F +E V +++++ EL+ I
Sbjct: 561 ASNGSHGHVLSEARAIGSLYPCSLT-DDTDQFLAELARELVKVWGDRALSVIELEDRIST 619
Query: 499 QSAMYPL--GPTVAL--TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
+ P AL + V + +V + E V+ GGLHVIGT HESRR+DNQL
Sbjct: 620 AAEKAPTDDAQIAALRESIARVKTEYDVVVTQEEVRVREAGGLHVIGTERHESRRVDNQL 679
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGRAGRQGD GSTRF +SL+D + + F + L++ +EDMPIE + R L G
Sbjct: 680 RGRAGRQGDLGSTRFFLSLEDNLLRIFGGER--VASLMNAFRVEEDMPIESGMLTRSLEG 737
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E YY+ IRK + E+DEV+ QR+ VY R+ +L G +Q+ Y + +D+I
Sbjct: 738 AQKKVETYYYDIRKQVFEYDEVMNNQRRAVYAERRRVLEG--RGLKKQVIGYGERTMDDI 795
Query: 675 IFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEE 723
+ V+P P W L +L +++F+ + + + G+S + L ++E
Sbjct: 796 VEAYVNPDLPPEEWDLGQLVSKVQQFVYLLEDLKPEQLQGLSMEELKSFLQE 847
>gi|157414246|ref|YP_001485112.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9215]
gi|166918845|sp|A8G7E5.1|SECA_PROM2 RecName: Full=Protein translocase subunit SecA
gi|157388821|gb|ABV51526.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
MIT 9215]
Length = 943
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 348/779 (44%), Positives = 467/779 (59%), Gaps = 81/779 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+ IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHECQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMNPVERKKNYDCDITYATNSELGFDYLRDNMATDVNEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA+++ LV+
Sbjct: 204 R---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAQLSLKLVKAKELSKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E L NDL++ DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDQGFAKCEEYLGVNDLYNPKDPWAHYITNALKAKELFIKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++N +A+I++E TGRV RRWS+G HQA+EAKE L+IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIIKNNEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLQIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ +PTN R D Q F T GKW+ +E ++
Sbjct: 381 GLAGMTGTAKTEEVEFEKTYKLESTVIPTNQLRKRKDWSDQVFKTEIGKWKAVAKETANI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRDGRPVLVGTTSVEKSELLSSLLSEEKIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ +++ L+ LL + D P + + S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLKEILIPLLVKP-------DNEHKPPIPKQRNSKSKG 553
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK-LIDKQSAMYPL 505
++ L K + + + + E++E S+ EL K D+Q ++ L
Sbjct: 554 GFSKKASSKLKKNISNSSTSLFPCK-----LDEAIEKQLSLLSDELVKNWGDRQLSVLEL 608
Query: 506 GPTVAL-----------------TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESR 548
+A + +V K+ E ++E +V++ GGLHVIGT HESR
Sbjct: 609 DDRIATAAEKAPTDDDLIKLLRESLSAVKKEYEKVLTHEEEKVRKAGGLHVIGTERHESR 668
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
R+DNQLRGRAGRQGD GSTRF +SL+D + + F D +L++ DEDMPIE +
Sbjct: 669 RVDNQLRGRAGRQGDLGSTRFFLSLEDNLLRIFGGDR--VANLMNAFRVDEDMPIESGML 726
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
R L Q E YY+ IRK + E+DEV+ QRK VY R +L G + +Q+ Y +
Sbjct: 727 TRSLESAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYGERLRVLKGND--LKRQVIGYGE 784
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEEL 724
+ EI+ ++P P W++D+L+ KEFI +LDDL S D L SIEEL
Sbjct: 785 RTMSEIVDAYINPDLPPEEWNIDQLISKVKEFIY----LLDDL---KSEDINLLSIEEL 836
>gi|303282721|ref|XP_003060652.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226458123|gb|EEH55421.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 1025
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 321/726 (44%), Positives = 433/726 (59%), Gaps = 56/726 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RD
Sbjct: 138 LRPFDVQLIGGMILHEGQIAEMRTGEGKTLVSALPAYLNALGGKGVHVVTVNDYLARRDC 197
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +VH+FLGL+ GLIQ GM EERR Y D+TY NSELGFDYLRDNLA + +LV+
Sbjct: 198 EWIGQVHKFLGLTCGLIQAGMAEEERREGYSSDVTYVTNSELGFDYLRDNLAQSPAELVL 257
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F ++DEVDS+LIDE R PL+ISG A K RY +AK+A+ + HY V+ K
Sbjct: 258 R---DFNFCVIDEVDSILIDEARTPLIISGIADKPSERYIQSAKIADAFEKDYHYKVDEK 314
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
S+ LTEEG AE L+ +DL+D WA +++NALKAKE +DV YI+++ + +I+
Sbjct: 315 QKSILLTEEGYEAAEDLLQVDDLYDPRTQWALYIINALKAKELQLKDVNYIIKSNEVIIV 374
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQAVEAKEGL IQ ++V +A +TYQ+ F+ +PKL GMTGTA+T
Sbjct: 375 DEFTGRTMVGRRWSDGLHQAVEAKEGLPIQNETVTIASVTYQAFFRTFPKLGGMTGTAET 434
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++ + V VPTN R D F GKW R+E+ M + GRPVLVG+
Sbjct: 435 ELTEFNNIYDLSVQVVPTNRSVAREDSQDVVFRNEPGKWNAVRREIARMHKKGRPVLVGT 494
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE + LL + GI + +LNA+P+ REAE VAQ+GRK A+TI+TNMAGRGTDI+
Sbjct: 495 TSVERSEEIGRLLDEDGIGYELLNAKPENVEREAEIVAQSGRKGAVTIATNMAGRGTDIL 554
Query: 398 LGGNPKMLAKKIIEDRLL----------LLLTREALNVEVDDKTSSPKVLSEIKLGSSSL 447
LGGN + +A+ I + LL + +++L DK L L ++
Sbjct: 555 LGGNAEFMARLKIREALLPKIVEPEEGDIAFEKKSLGGANADKWKVKDGLYPCDLSPATE 614
Query: 448 ALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGP 507
ALL A A +W + +F +E +L +K P
Sbjct: 615 ALLKSAVDTAV-------DAWGARSIGAFDAED----------KLSFACEKAPTEEPGTL 657
Query: 508 TVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGST 567
+ + + K+ + S E EV LGGLHV+GT HESRR+DNQLRGRAGRQGDPGST
Sbjct: 658 AIREAFNEIEKEFKAVTSAEKVEVVGLGGLHVVGTERHESRRVDNQLRGRAGRQGDPGST 717
Query: 568 RFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIR 627
R+ +SL+D +F+ F + + L+S D DMPIE + L Q E Y++ IR
Sbjct: 718 RYFLSLEDNLFRIFGGEKIQS--LMSAFQID-DMPIESGMLTSSLDTAQKKVETYFYDIR 774
Query: 628 KSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY 687
K L ++D VL QR+ +Y R+ L+ E QQ+ +Y + VD+I+ N+DP P
Sbjct: 775 KQLFDYDAVLNSQREKIYFERRRALSAKPEDLQQQMLEYAELTVDDIVNANLDPSVAPSE 834
Query: 688 WSLDKL 693
W L L
Sbjct: 835 WPLKGL 840
>gi|90994572|ref|YP_537062.1| preprotein translocase subunit SecA [Pyropia yezoensis]
gi|122194645|sp|Q1XDA6.1|SECA_PORYE RecName: Full=Protein translocase subunit SecA
gi|90819136|dbj|BAE92505.1| Preprotein translocase subunit [Pyropia yezoensis]
Length = 884
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 332/900 (36%), Positives = 497/900 (55%), Gaps = 124/900 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ++G +LH G IAEMKT VVTVNDYLA+RD+
Sbjct: 77 LRVFDVQMMGAIILHQGKIAEMKTGEGKTLVATLAGYLNALSGEGVHVVTVNDYLAKRDS 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLGLSVGLIQ+ + ER+ Y+CD+TY NSELGFDYL+DN+ + ++V
Sbjct: 137 EWVGQIHKFLGLSVGLIQQALPKVERKLAYQCDVTYVTNSELGFDYLKDNMVLSMSEIVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F F I+DEVDS+LIDE R PL+ISG + + +Y +A +L + +HY V+ K
Sbjct: 197 ---NKFAFCIIDEVDSILIDEARTPLIISGPSEAPIEKYSRTKLLANILSKDVHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LTE+G E L N+L+D +PW ++++NA+KA+E + +DV YI+R+ + +I+
Sbjct: 254 ARNIILTEQGTLFCEEYLSINNLYDLENPWVQYILNAIKARELFTKDVHYIIRDKEVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQA+EAKE + IQ ++ A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRIMSGRRWSDGLHQAIEAKEDVVIQQENQTYASITYQNFFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + VI VPT+ P R + P ++ KWE E M+R+GRP LVG+
Sbjct: 374 EESELDKIYNLEVICVPTHKPLRRKEFPDLVYSNEYRKWEAIADECYDMYRVGRPTLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL Q IPH++LNA+P+ +E++ +AQAGR+ ++TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSKLLNQYKIPHSLLNAKPENVEKESDIIAQAGRQSSVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP +AK I+ D LL+ + ++ + SP ++I L + AL
Sbjct: 494 LGGNPSYIAKSILVD---LLIGKSSVKNNYKLQQLSPN--TKISLNNILNALET------ 542
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
+ S +EM + +++ Q L D + L + Y +
Sbjct: 543 --------------DLHSVDFSMLEMEKKISIACEQVLTDDK-----LEIQLRKAYQMIF 583
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
++ E S E V + GGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF +S+ D +
Sbjct: 584 EEFETIFSKEREYVSQAGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSVDDNL 643
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
+ F + DL+ + D D P+E + + L Q E Y++ RK + E+D+VL
Sbjct: 644 LRIFGGNK--IADLMQALNVDNDTPMESTLLSKSLEAAQKKVEAYFYDTRKQVFEYDQVL 701
Query: 638 EVQRKHVYDLRQSILTGAN-ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
QR+ +Y R+ IL + C + QY ++ +D+II +W
Sbjct: 702 NSQRQAIYAERRRILESSYPRDC---VLQYAESTIDDII----------TFW-------- 740
Query: 697 FIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS 756
L S E + +++I Y + ++ + + + S
Sbjct: 741 ---------------------LTSKENPEKFVNLNIKIKYLLNAADTFSISKDLYKDSEE 779
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
LK+W+ + R +L YL I ++++E+ L+
Sbjct: 780 LKKWII---------EQVRINYDLREAYLEQIKPG--------------LIRQLEKYYLL 816
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
+ +D W+DHL M L ++ RS+G ++PL EYK + FI M++ + V ++++
Sbjct: 817 QQIDNAWKDHLQKMGALRDSIGWRSYGQQDPLVEYKNEAFNLFIEMITHVKHTVVYAILR 876
>gi|126697168|ref|YP_001092054.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
MIT 9301]
gi|166918843|sp|A3PFC8.1|SECA_PROM0 RecName: Full=Protein translocase subunit SecA
gi|126544211|gb|ABO18453.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
MIT 9301]
Length = 943
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 353/776 (45%), Positives = 469/776 (60%), Gaps = 75/776 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL++ IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGIVLNECQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMNPLERKKNYDCDITYATNSELGFDYLRDNMATDINEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGL 150
R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA K EL G+
Sbjct: 204 R---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAELSLELLKAKELSKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E L +DL++ DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDQGFAKCEEYLGVSDLYNPQDPWAHYITNALKAKELFIKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++N +A+I++E TGRV RRWS+G HQA+EAKE LKIQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIIKNEEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLKIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ +PTN R D Q F T GKW+ +E +
Sbjct: 381 GLAGMTGTAKTEEVEFEKTYKLESTVIPTNQTRKRQDWSDQVFKTEIGKWKAVAKETAQI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HREGRPVLVGTTSVEKSELLSSLLSEEKIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ +++ L+ LL + + + K PK S S S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLKEILVPLLVKP----DNEHKPPIPKQRS-----SKS 551
Query: 447 LALLAKAAL--LAKYVGKAEGKSWTYQEAKSFFSE----SVEMSQSMNLKELQ--KLIDK 498
+K A+ L K + + + + ++F + S E+ +S ++L +L D+
Sbjct: 552 KGGFSKKAVTNLKKNISNSSTSLFPCKLDEAFEKKLSVLSDELVKSWGDRQLSVLELDDR 611
Query: 499 QSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRID 551
+ PT + + V K+ E +E +V+ GGLHVIGT HESRR+D
Sbjct: 612 IATAAEKAPTDDNSIKLLRESLSDVKKEYEKVLIHEEEKVREAGGLHVIGTERHESRRVD 671
Query: 552 NQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQ 611
NQLRGRAGRQGD GSTRF +SL D + + F D +L++ DEDMPIE + R
Sbjct: 672 NQLRGRAGRQGDLGSTRFFLSLDDNLLRIFGGDR--VANLMNAFRVDEDMPIESGMLTRS 729
Query: 612 LLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
L Q E YY+ IRK + E+DEV+ QRK VY R +L G + +Q+ Y + +
Sbjct: 730 LESAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYGERLRVLKGID--LKRQVIGYGERTM 787
Query: 672 DEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEEL 724
EI+ ++P P W++D+L+ KEFI +LDDL S D L SIEEL
Sbjct: 788 IEIVDAYINPDLPPEEWNIDQLISKVKEFIY----LLDDL---KSDDINLLSIEEL 836
>gi|123969381|ref|YP_001010239.1| preprotein translocase subunit SecA [Prochlorococcus marinus str.
AS9601]
gi|166918848|sp|A2BTM1.1|SECA_PROMS RecName: Full=Protein translocase subunit SecA
gi|123199491|gb|ABM71132.1| Preprotein translocase SecA subunit [Prochlorococcus marinus str.
AS9601]
Length = 943
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 348/779 (44%), Positives = 457/779 (58%), Gaps = 81/779 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL++ IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLNECQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMNPVERKKNYDCDITYATNSELGFDYLRDNMATDISEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGL 150
R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA K EL G+
Sbjct: 204 R---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAELSLALIKAKELSKDGI 260
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E L NDL++ DPWA ++ NALKAKE + +DV
Sbjct: 261 DPEGDYEVDEKQRSCILTDQGFAKCEEYLGVNDLYNPQDPWAHYITNALKAKELFIKDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++N +A+I++E TGRV RRWS+G HQA+EAKE LKIQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIIKNEEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLKIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ +PTN R D Q F T GKW+ +E +
Sbjct: 381 GLAGMTGTAKTEEVEFEKTYKLESTVIPTNQIRKRQDWSDQVFKTEIGKWKAVAKETAKI 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL + IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HRDGRPVLVGTTSVEKSELLSSLLSAEKIPHNLLNAKPENVEREAEIVAQAGRAGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSS 446
TNMAGRGTDIILGGN +A+ +++ L+ LL + D P + + S
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLKEILIPLLVKP-------DNEHKPPIPKQRNSKSKG 553
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK-LIDKQSAMYPL 505
+ L K + + + + E +E S+ EL K DKQ ++ L
Sbjct: 554 GFSRKAGSNLKKKISNSSTNLFPCK-----LDEVIEKKLSLLSDELVKNWGDKQLSVLEL 608
Query: 506 GPTVALT---------YLSVLKDCEVHCSN--------EGSEVKRLGGLHVIGTSLHESR 548
+A + +L++ N E +V+ GGLHVIGT HESR
Sbjct: 609 DDRIATAAEKAPTDDKLIRLLRESLSDVKNEYEKVLIHEEEKVREAGGLHVIGTERHESR 668
Query: 549 RIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAI 608
R+DNQLRGRAGRQGD GSTRF +SL D + + F D +L++ DEDMPIE +
Sbjct: 669 RVDNQLRGRAGRQGDLGSTRFFLSLDDNLLRIFGGDR--VANLMNAFRVDEDMPIESGML 726
Query: 609 VRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQ 668
R L Q E YY+ IRK + E+DEV+ QRK VY R +L G + +Q+ Y +
Sbjct: 727 TRSLESAQKKVETYYYDIRKQVFEYDEVMNNQRKAVYGERLRVLKGID--LKRQVIGYGE 784
Query: 669 AVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEEL 724
+ EI+ ++P P W++++L+ KEFI +LDDL D L SIEEL
Sbjct: 785 RTMIEIVDAYINPDLPPEEWNIEQLISKVKEFIY----LLDDLKV---EDINLLSIEEL 836
>gi|11465847|ref|NP_053991.1| preprotein translocase subunit SecA [Porphyra purpurea]
gi|1711358|sp|P51381.1|SECA_PORPU RecName: Full=Protein translocase subunit SecA
gi|1276847|gb|AAC08267.1| Preprotein translocase subunit (chloroplast) [Porphyra purpurea]
Length = 884
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/905 (36%), Positives = 495/905 (54%), Gaps = 134/905 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQIIG +LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 77 LRVFDVQIIGAIILHQGKIAEMKTGEGKTLVATLAGYLNALSGKGVHIVTVNDYLARRDS 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLGLSVGLIQ+ + ER+ Y+CD+TY NSELGFDYL+DN+ + ++V
Sbjct: 137 EWVGQIHKFLGLSVGLIQQDLSKAERKLAYQCDVTYVTNSELGFDYLKDNMVLSMSEIVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F F I+DEVDS+LIDE R PL+ISG + V +Y ++ +L + +HY V+ K
Sbjct: 197 ---NKFAFCIIDEVDSILIDEARTPLIISGPSEAPVEKYTQTNLLSNILFKDVHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT++G E L ++L+D +PW +++NA+KAKE + +DV YI+R+ + +I+
Sbjct: 254 ARNIILTDKGTLFCEDHLSIDNLYDLENPWVHYILNAIKAKELFIKDVHYIIRDNQVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQA+EAKE + IQ ++ A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRIMSGRRWSDGLHQAIEAKEQVPIQQENQTYASITYQNFFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + VI VPT+ P R + ++ KWE E M+R GRP LVG+
Sbjct: 374 EESELDKIYNLEVICVPTHRPLRRKEFSDLVYSNEYRKWEAIADECYDMYRAGRPTLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL + IPH++LNA+P+ +E++ +AQAGR+ ++TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSKLLTEYKIPHSLLNAKPENVEKESDIIAQAGRQSSVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP +AK I+ D L+ ++ V + +KL SL K
Sbjct: 494 LGGNPSYIAKSILIDLLIKKIS----------------VQNNLKLQQLSL----KTQYCI 533
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVAL----TY 513
+ K+ Y ++++ EL+K I + + + Y
Sbjct: 534 NQILKSLEDDLIY--------------ANLSVLELEKKISIACEQVAISRNLEIQLRKAY 579
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
+ ++ E S E V + GGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF +S+
Sbjct: 580 QLIFQEYENIFSQEKKYVAQAGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSI 639
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+D + + F + DL+ + D+D P+E + + L Q E Y++ RK + E+
Sbjct: 640 EDNLLRIFGGNK--IADLMQALNVDDDTPMESTLLSKSLEAAQKKVEAYFYDTRKQVFEY 697
Query: 634 DEVLEVQRKHVYDLRQSIL-TGANESCSQQIFQYMQAVVDEII-FGNVDPLKHPRYWSLD 691
D+VL QR+ +Y R+ IL +G C I QY ++ +D+I+ F + ++ +L+
Sbjct: 698 DQVLNSQRQAIYAERRRILESGYPRDC---ILQYAESTIDDIVNFCLTSKENNEKFVNLN 754
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
+K LN+ D F+ + +
Sbjct: 755 TKIKYL-----------------------------LNATD--TFFIS---------KDLY 774
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
SS LK+W+ + R +L YL I ++++E
Sbjct: 775 SDSSELKKWIT---------EQVRINYDLREAYLEQIKPG--------------LIRQLE 811
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ L++ +D W+DHL M L A+ RS+G ++PL EYK + FI M++ + V
Sbjct: 812 KYYLLQQIDNAWKDHLQKMGALRDAIGWRSYGQQDPLVEYKNEAFNLFIEMITHVKHTVV 871
Query: 872 ESLVQ 876
++++
Sbjct: 872 YAILR 876
>gi|378787418|gb|AFC40049.1| preprotein translocase subunit SecA [Porphyra umbilicalis]
Length = 884
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/900 (36%), Positives = 500/900 (55%), Gaps = 124/900 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IG +LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 77 LRVFDVQMIGAIILHQGKIAEMKTGEGKTLVATLAGYLNALSGNGVHIVTVNDYLARRDS 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLGLSVGLIQ+ + ER+ Y+CD+TY NSELGFDYL+DN+ + ++V
Sbjct: 137 EWVGQIHKFLGLSVGLIQQDLPKVERKLAYQCDVTYITNSELGFDYLKDNMVLSMSEIVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F F I+DEVDS+LIDE R PL+ISG + + +Y ++ +LV+ +HY V+ K
Sbjct: 197 ---NKFSFCIIDEVDSILIDEARTPLIISGPSEAPIEKYSQTNLLSNILVKDVHYEVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT++G E L ++L+D +PW +++NA+KAKE + +D+ YI+R+ + +I+
Sbjct: 254 ARNIVLTDKGTLFCEDQLSIDNLYDLENPWVHYILNAIKAKELFIKDIHYIIRDNQVVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQA+EAKE IQ ++ A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRIMSGRRWSDGLHQAIEAKEHAPIQQENQTYASITYQNFFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E K++ + VI VPT+ P R +L ++ KWE E M+R GRP LVG+
Sbjct: 374 EESELDKIYNLEVICVPTHRPLRRQELSDLVYSNEYRKWEAIADECYDMYRSGRPTLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LL + IPH++LNA+P+ +E++ +AQAGR+ ++TI+TNMAGRGTDII
Sbjct: 434 TSVEKSELLSRLLTEYKIPHSLLNAKPENVEKESDIIAQAGRQSSVTIATNMAGRGTDII 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP +AK I+ D LL+ + ++ + SP + + +S L
Sbjct: 494 LGGNPSYIAKSILLD---LLIKKSSVQSNSKLQQLSPNTQNSVNQILTS---------LE 541
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
+ + ++ S E V +S + +L+K Y +
Sbjct: 542 DDLTDSNFSVLELEKKISIACEQVAISSNFE-TQLRK-----------------AYQIIF 583
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
++ E S E V + GGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF +S++D +
Sbjct: 584 QEYENTFSQEKEYVAQAGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSIEDNL 643
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
+ F + DL+ + D D P+E + + L Q E Y++ RK + E+D+VL
Sbjct: 644 LRIFGGNK--IADLMQALNVDNDTPMESTLLSKSLEAAQKKVEAYFYDTRKQVFEYDQVL 701
Query: 638 EVQRKHVYDLRQSIL-TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
QR+ +Y R+ IL +G C I QY ++ +D+I+ +W
Sbjct: 702 NSQRQAIYAERRRILESGYPRDC---ILQYAESTIDDIV----------NFW-------- 740
Query: 697 FIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS 756
+ K ++ F + +T +K + LN+ D F+ + + SS
Sbjct: 741 ---LNSKENNEKFVNL--NTKIKYL-----LNATD--TFFIS---------KDLYSDSSE 779
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
LK+W+ + R +L YL I ++++E+ L+
Sbjct: 780 LKKWII---------EQVRINYDLREAYLEQIKPG--------------LIRQLEKYYLL 816
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
+ +D W+DHL M L ++ RS+G ++PL EYK + + FI M++ + V ++++
Sbjct: 817 QQIDNAWKDHLQKMGALRDSIGWRSYGQQDPLVEYKNEAFKLFIDMITHVKHTVVYAILR 876
>gi|2500725|sp|Q36795.1|SECA_SPIOL RecName: Full=Protein translocase subunit SecA, chloroplastic;
Flags: Precursor
gi|939976|emb|CAA88933.1| SecA [Spinacia oleracea]
Length = 1036
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 322/720 (44%), Positives = 429/720 (59%), Gaps = 41/720 (5%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 165 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALTGKGVHVVTVNDYLARRDC 224
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGL+Q+ M E RR NY CDITY NSELGFD+LRDNLA + ++LV+
Sbjct: 225 EWVGQVARFLGLKVGLVQQNMTSEVRRENYLCDITYVTNSELGFDFLRDNLATSVDELVL 284
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV+ K
Sbjct: 285 RG---FNFCVIDEVDSILIDEARTPLIISGPAEKPSERYYKAAKIAAAFERDIHYTVDEK 341
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G AE L+ DL+D + WA +++NA+KAKE + +DV YI+R + LI+
Sbjct: 342 QKTVLIMEQGYQDAEEILDVEDLYDPREQWALYILNAIKAKELFLKDVNYIIRGKEILIV 401
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEG+ IQ +++ +A I+YQ+ F +PKL GMTGTA T
Sbjct: 402 DEFTGRVMQGRRWSDGLHQAVEAKEGVPIQNETITLASISYQNFFLQFPKLCGMTGTAAT 461
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + G PVLVG+
Sbjct: 462 ESAEFESIYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGLPVLVGT 521
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS+ L+Q IPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 522 TSVEQSESLSEQLQQASIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 581
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +A+ I + L+ + R V K P ++K L K A L
Sbjct: 582 LGGNAEFMARLKIREMLMPRVVRPGDGGFVSMKKPPPMKTWKVKETLFPCKLSQKNAKLV 641
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
+ K+W + +E + L +K A + + +L V
Sbjct: 642 DEAVQLAVKTWGQRSLSELEAE----------ERLSYSCEKGPAQDEVIAKLRHAFLEVA 691
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
K+ + E ++V GGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D +
Sbjct: 692 KEYKTFTDEEKNKVVLAGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNI 751
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
F+ F D + + R ED+PIE + R L Q E Y+F IRK L E+DEVL
Sbjct: 752 FRVFGGDR---IQGLMRAFRVEDLPIESKMLTRALDEAQRKVENYFFDIRKQLFEYDEVL 808
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
QR VY R+ L N + +Y + +D+I+ N+ W L+KL+ +
Sbjct: 809 NSQRDRVYVERRRALESDN--LESLLIEYAELTMDDILEANIGSDAPKENWDLEKLIAKL 866
>gi|452821427|gb|EME28457.1| [pt] preprotein translocase subunit A [Galdieria sulphuraria]
Length = 912
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/741 (41%), Positives = 454/741 (61%), Gaps = 52/741 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+ HFDVQ++GG LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 80 LEHFDVQLMGGIALHKGKIAEMKTGEGKTLVATLPAYLNSLLRKGVHIVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +++RFLGL VGLIQ M +ER+ NY DITY NSELGFDYLRDNL + +++V
Sbjct: 140 EWVGQIYRFLGLKVGLIQNFMTKDERKKNYLADITYVTNSELGFDYLRDNLVKSVDEIVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++AI+DEVDS+LIDE R PL+ISG+++ +Y ++ ++ + L +G HY ++ K
Sbjct: 200 R---EFYYAIIDEVDSILIDEARTPLIISGQSNIIDEKYKISCEIVKELQKGHHYEIDYK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ L ++GI E L NDL+D DPWA +++NAL+AKE ++++V YI+ N + +I+
Sbjct: 257 YRNIILKDKGIVKCEKLLNINDLYDIKDPWAPYILNALRAKELFQKNVHYIINNNQIIIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW++G+HQ++EAKE L+IQ ++ +A ITYQ+LF LYPKLSGMTGTAKT
Sbjct: 317 DEFTGRIMPGRRWADGLHQSIEAKENLEIQKETQTLASITYQNLFLLYPKLSGMTGTAKT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V+ +PTN P IR DL + T KW E + + GRPVLVG+
Sbjct: 377 EEAEFNKIYNLEVVVIPTNKPMIRKDLSDVIYKTEYYKWNAVLSECKENYSKGRPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE +S+LLK IPH VLNA+P+ A REAE +AQAGRKY+ITI+TNMAGRGTDII
Sbjct: 437 TSVEKSELISNLLKTSEIPHQVLNAKPENAEREAEIIAQAGRKYSITIATNMAGRGTDII 496
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAAL-L 456
LGGN LAK ++ L+ + ++ + + +I L + +L + L
Sbjct: 497 LGGNIDYLAKSNLQFIYKSLIQKNNNDINCNCIYDALIKTFDINLSYQTQKVLKNFIINL 556
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSV 516
+Y+ ++E S++ S + L E++K Y S+
Sbjct: 557 KQYLNNININEIDFEEKLILASKNFNQSDYLCL-EIKK-----------------AYQSL 598
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
+ + ++ E E+ RLGGL++IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D
Sbjct: 599 ISEYKIKFVKEHDEIIRLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSLEDS 658
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ + F D + L++ + ++ +PIE I + L Q E +YF RK L E+D+V
Sbjct: 659 LLKTFGSDR--LISLMNTLKLEDSIPIESSFINQSLESAQKKVESFYFNSRKQLFEYDKV 716
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNV--DPLKHPRYWSLDK-- 692
L QR+ +Y R+ IL + + +++ + +D+ + ++ D K Y + D
Sbjct: 717 LNTQRQIIYSERKKILLSDDNLLKKIALEFILSSIDDCLASHLANDYNKKLNYQNKDNIV 776
Query: 693 -LLKEFIAIAGKILDDLFAGI 712
L ++ ++++ K + L I
Sbjct: 777 MLFEDLLSLSNKFSNHLIRNI 797
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M ++ER L++ +D W++HL + L + RS+G ++PL EYK + F+ ++
Sbjct: 829 MSDIERYFLLEQIDSEWKEHLKQIANLQETIGWRSYGQKDPLIEYKKESFNLFVKLIIQI 888
Query: 867 RR 868
R
Sbjct: 889 RH 890
>gi|11467640|ref|NP_050692.1| preprotein translocase subunit SecA [Guillardia theta]
gi|6094262|sp|O78441.1|SECA_GUITH RecName: Full=Protein translocase subunit SecA
gi|3602965|gb|AAC35626.1| preprotein-translocase subunit a (chloroplast) [Guillardia theta]
Length = 877
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/702 (44%), Positives = 424/702 (60%), Gaps = 72/702 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG +L+DG IAEMKT VVTVNDYLA+RD+
Sbjct: 77 LRHFDVQLIGGLILNDGKIAEMKTGEGKTLVALLPTYLNALAGFGVHVVTVNDYLARRDS 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +VH+FLGL+VGLIQ GM ERR NY D+TY NSELGFDYLRDN+A + E +V
Sbjct: 137 EWVGQVHKFLGLTVGLIQEGMSQFERRENYLKDVTYATNSELGFDYLRDNMAIDLEDIVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F ++DEVDS+LIDE R PL+ISG + V +Y A +++ L++ + Y ++ K
Sbjct: 197 R---PFYFCVIDEVDSILIDEARTPLIISGPGNSPVNKYIKANVISQDLIKDIDYEIDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LT+ GI E L D+++ DPWA ++ NA+KAKE + ++ YI+RN + +I+
Sbjct: 254 ARNVILTDNGILKCENLLGNTDIFNLQDPWAPYIFNAIKAKELFLENIHYIIRNQEIVIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQA+EAKE + IQ+++ +A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 314 DEFTGRIMSGRRWSDGLHQAIEAKESVPIQSETQTLASITYQNFFLLYPKLSGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE E +++ + V VPT+ RVD P + T KW+ E M LGRPVL+G+
Sbjct: 374 EETELDRIYGLEVNCVPTHKIMQRVDFPDLIYKTQYSKWKSIADECLDMHNLGRPVLIGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ G+PHN+LNA+P+ REAE VAQAGR A+TI+TNMAGRGTDI+
Sbjct: 434 TSVEKSELLSSLLKEYGVPHNLLNAKPENVQREAEIVAQAGRLGAVTIATNMAGRGTDIL 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSP----KVLSEIKLGSSSLALLAKA 453
LGGN +A+ + D LL +A + D T+ K + KL + +
Sbjct: 494 LGGNTSYMARTALID---LLHVNDASTISTDIATNVDFLKLKTFIQTKLDIETFINDPQC 550
Query: 454 ALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTY 513
L +G A KS+T E ++I T+ Y
Sbjct: 551 NL---KLGLACEKSFTNDE---------------------QII-----------TLRAVY 575
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
+++ E S E V+ LGGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF +SL
Sbjct: 576 QVLIEYYEKLLSPEKLRVQSLGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSL 635
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D + + F+ D ++ ++ DED+PIE + L Q E YY+ RK L ++
Sbjct: 636 DDNLLRIFNGDK--IAKIMDQLQIDEDLPIESKLLNSSLESAQKKVEAYYYDARKQLFDY 693
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
DEVL QR+ +Y R+ IL N I QY + +++ I
Sbjct: 694 DEVLNYQRQAIYFERRKILETNN--LRSWILQYAETTIEQYI 733
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER+ L++ +D W++HL + L ++ R +G ++PL EYK + F++M+S
Sbjct: 801 MRELERSFLLQKIDSSWKEHLQQITILRESIGWRGYGQKDPLIEYKNEAFNLFVNMVSKI 860
Query: 867 RRLTV 871
R+ V
Sbjct: 861 RQSVV 865
>gi|159477715|ref|XP_001696954.1| chloroplast-associated SecA protein [Chlamydomonas reinhardtii]
gi|158274866|gb|EDP00646.1| chloroplast-associated SecA protein [Chlamydomonas reinhardtii]
Length = 1029
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 345/904 (38%), Positives = 493/904 (54%), Gaps = 116/904 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RD+
Sbjct: 146 LRPFDVQLIGGMILHEGQIAEMRTGEGKTLVAVLPAYLNALTGRGVHVVTVNDYLARRDS 205
Query: 38 EWMERVHRFLGLSVGLIQ------RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAAN 91
EW+ +VHRFLGLSVGLIQ RG S + I ++++ R L
Sbjct: 206 EWVGQVHRFLGLSVGLIQVRRWQERGEGGGVSSSPSQSLIRPSSSTP------RPPLCQA 259
Query: 92 SEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH 151
+LV+R PF+F ++DEVDS+LIDE R PL+ISG + K +Y A K+A+ L + +H
Sbjct: 260 PAELVLREATPFNFCVIDEVDSILIDEARTPLIISGMSDKPSTKYVKAHKIADALSRDVH 319
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRN 211
YTV+ K SV LTE+G E L+ DL+D WA +++NALKAKE ++V YIV+
Sbjct: 320 YTVDEKQKSVLLTEDGYEAVEDVLQVTDLYDPRTQWASYIINALKAKELQIKNVNYIVKA 379
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
G+ +I++E TGR RRWS+G+HQAVEAKEGL+IQ +++ +A ++YQ+ F+ +PKL+GM
Sbjct: 380 GEVIIVDEFTGRTMPGRRWSDGLHQAVEAKEGLEIQNENITLASVSYQAFFRGFPKLAGM 439
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF ++++PV VPTN R D P F + KW+ EV+ M + GR
Sbjct: 440 TGTAATEVSEFDSIYKLPVAVVPTNRSISRQDNPDVVFRLEQYKWKAVVTEVKRMHKTGR 499
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TSVE SE LS +L+++GI H VLNA+P+ RE+E VAQ+GRK A+TISTNMAG
Sbjct: 500 PVLVGTTSVEKSEILSAMLQEEGIRHQVLNAKPENVERESEIVAQSGRKGAVTISTNMAG 559
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
RGTDI+LGGN +A+ +L +L E + + DD + ++G A +
Sbjct: 560 RGTDILLGGNADYMARL----KLREMLMPEVVTIVEDDN-------NPFRVGKDGKARVR 608
Query: 452 KAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPT--- 508
A E + T AKS + +V + L EL+ D+ S G T
Sbjct: 609 NWAANPSLF-PCELSANTMSMAKSAVTAAVAAWGTRQLSELEAE-DRLSVACEKGHTEDP 666
Query: 509 ----VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
+ + ++L + + E +EV LGGLHVIGT HESRRIDNQLRGR+GRQGDP
Sbjct: 667 ELLKLREAFGAMLSEYKAVTEVEKAEVVGLGGLHVIGTERHESRRIDNQLRGRSGRQGDP 726
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
GSTRF +SL+D +F+ F D + + ++ ED+P+E + L Q E Y+F
Sbjct: 727 GSTRFFLSLEDPLFRVFGGDRIKGLMVAFQV---EDLPMESSMLSDALDTAQKRVEAYFF 783
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
IRK+L ++D+V+ QR +Y R+ L + +Q + +Y + D+I+ NVD
Sbjct: 784 DIRKNLFDYDQVVNTQRDKIYAERRKALLAPD--LAQMMREYAEKTADDILEANVDKSTE 841
Query: 685 PRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPP 744
P W LD L + + L G++GD LLK E
Sbjct: 842 PAEWKLDSLAAKMVQYC-----YLLEGLTGDELLKVANE--------------------- 875
Query: 745 NLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD 804
+ F G+R L R +C D K ++ VQ
Sbjct: 876 SGFEGLR---VHLHR---VCVDAYEKK-------------------VQMVDAVQPG---- 906
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M EV++ ++ D W++HL + L AV +R + ++PL E+K++G F+ M +
Sbjct: 907 -LMAEVQKFFVLSQTDSLWKEHLQAIKFLQQAVGLRGYASKDPLTEFKLEGYNLFVDMTA 965
Query: 865 ATRR 868
RR
Sbjct: 966 QIRR 969
>gi|359479991|ref|XP_002273928.2| PREDICTED: protein translocase subunit SecA, chloroplastic-like
[Vitis vinifera]
Length = 1000
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 324/744 (43%), Positives = 438/744 (58%), Gaps = 77/744 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 143 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 202
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M E+RR NY CDITY+ ++LV+
Sbjct: 203 EWVGQVPRFLGLQVGLIQQNMTSEQRRENYLCDITYS-----------------VDELVL 245
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+A + LHYTV+ K
Sbjct: 246 RG---FNYCVIDEVDSILIDEARTPLIISGPAEKPSDRYYKAAKIALAFERDLHYTVDEK 302
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G AE L DL+D + WA +++NA+KAKE + RDV YI+R + LI+
Sbjct: 303 LKTVLLTEQGYEDAEEILALKDLYDPREQWASYILNAIKAKELFLRDVNYIIRGKEVLIV 362
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 363 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 422
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GRPVLVG+
Sbjct: 423 EGTEFQSIYKLKVTIVPTNKPMIRKDESDVVFRATTGKWRAVVVEISRMHKTGRPVLVGT 482
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS+ L + GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 483 TSVEQSDSLSEQLNEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 542
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI-------KLGSSSLALL 450
LGGN + +A+ + + L+ + + V V K PK + ++ KL S++ L
Sbjct: 543 LGGNAEFMARLKLREMLMPRVVKLVEGVFVSVKKLPPKKIWKVNESLFPCKLSSTNTKLA 602
Query: 451 AKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
+A LA K GK +S T EA+ S S E + + +I K +
Sbjct: 603 EEAVELAVKTWGK---RSLTELEAEERLSYSCEKGPAQD-----DVIAKLRS-------- 646
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L ++K+ +++ E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 647 --AFLEIVKEYKIYTEEERKKVVSAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 704
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + R+ ED+PIE + + L Q E Y+F IRK
Sbjct: 705 FLSLEDNIFRIFGGDRIQGLMTAFRV---EDLPIESKMLTKALDEAQRKVENYFFDIRKQ 761
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L E+DEVL QR VY R+ L N + +Y + +D+I+ N+ W
Sbjct: 762 LFEYDEVLNSQRDRVYAERRRALESNN--LQSLLIEYAELTMDDILEANIGSDAPKESWD 819
Query: 690 LDKL---LKEFIAIAGKILDDLFA 710
L+KL L+++ + + DL A
Sbjct: 820 LEKLIVKLQQYCYLLNDLTPDLLA 843
>gi|297744087|emb|CBI37057.3| unnamed protein product [Vitis vinifera]
Length = 938
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 326/744 (43%), Positives = 432/744 (58%), Gaps = 81/744 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 85 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M E+RR NY CDITY NSELGFD+LRDNLA +E L+
Sbjct: 145 EWVGQVPRFLGLQVGLIQQNMTSEQRRENYLCDITYVTNSELGFDFLRDNLA--TEMLMT 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PL+ISG A K RY AAK+A + LHYTV+ K
Sbjct: 203 R----------------------TPLIISGPAEKPSDRYYKAAKIALAFERDLHYTVDEK 240
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTE+G AE L DL+D + WA +++NA+KAKE + RDV YI+R + LI+
Sbjct: 241 LKTVLLTEQGYEDAEEILALKDLYDPREQWASYILNAIKAKELFLRDVNYIIRGKEVLIV 300
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 301 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 360
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GRPVLVG+
Sbjct: 361 EGTEFQSIYKLKVTIVPTNKPMIRKDESDVVFRATTGKWRAVVVEISRMHKTGRPVLVGT 420
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS+ L + GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 421 TSVEQSDSLSEQLNEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 480
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI-------KLGSSSLALL 450
LGGN + +A+ + + L+ + + V V K PK + ++ KL S++ L
Sbjct: 481 LGGNAEFMARLKLREMLMPRVVKLVEGVFVSVKKLPPKKIWKVNESLFPCKLSSTNTKLA 540
Query: 451 AKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
+A LA K GK +S T EA+ S S E K A + +
Sbjct: 541 EEAVELAVKTWGK---RSLTELEAEERLSYSCE---------------KGPAQDDVIAKL 582
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L ++K+ +++ E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 583 RSAFLEIVKEYKIYTEEERKKVVSAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 642
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + R+ ED+PIE + + L Q E Y+F IRK
Sbjct: 643 FLSLEDNIFRIFGGDRIQGLMTAFRV---EDLPIESKMLTKALDEAQRKVENYFFDIRKQ 699
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L E+DEVL QR VY R+ L N + +Y + +D+I+ N+ W
Sbjct: 700 LFEYDEVLNSQRDRVYAERRRALESNN--LQSLLIEYAELTMDDILEANIGSDAPKESWD 757
Query: 690 LDKL---LKEFIAIAGKILDDLFA 710
L+KL L+++ + + DL A
Sbjct: 758 LEKLIVKLQQYCYLLNDLTPDLLA 781
>gi|302817656|ref|XP_002990503.1| hypothetical protein SELMODRAFT_160951 [Selaginella moellendorffii]
gi|300141671|gb|EFJ08380.1| hypothetical protein SELMODRAFT_160951 [Selaginella moellendorffii]
Length = 897
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 368/926 (39%), Positives = 500/926 (53%), Gaps = 149/926 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 47 LRPFDVQLIGGMVLHKGQIAEMKTGEGKTLVAVLPAYLNALSGQGVHVVTVNDYLARRDA 106
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++ RFLGL VGLIQ+GM ERR+NY DITY NSELGFDYLRDNLA + + LV+
Sbjct: 107 EWVGQIPRFLGLKVGLIQQGMDSAERRTNYGSDITYVTNSELGFDYLRDNLALSPDDLVL 166
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F+F ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV+ K
Sbjct: 167 ---PSFNFCVIDEVDSILIDEARTPLIISGPAEKPTDRYYKAAKIAAAFARDVHYTVDEK 223
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV +TEEG AE L+ DL+D + WA +V+NA+KAKE + +DV YIVR LI+
Sbjct: 224 QKSVLITEEGYEAAEEILDVKDLYDPREQWASYVINAIKAKELFLKDVNYIVRGEDVLIV 283
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRW++G+HQAVEAKE L +Q ++V +A I+YQ+ F YP+L GMTGTA T
Sbjct: 284 DEFTGRALPGRRWNDGLHQAVEAKESLPVQNETVALASISYQNFFLQYPRLCGMTGTAAT 343
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++++ V VPTN IR D F GKW E+ M + GRPVLVG+
Sbjct: 344 ERSEFEKIYKLSVAVVPTNRAMIRKDESDVVFRAVTGKWTAVVVEISRMHKAGRPVLVGT 403
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS L + IPH +LNA+P+ RE+E +AQ+GR A+T++TNMAGRGTDII
Sbjct: 404 TSVEQSESLSKQLSEANIPHQILNAKPENVERESEIIAQSGRVGAVTLATNMAGRGTDII 463
Query: 398 LGGNPKMLAKKIIEDRLL---LLLTREALNVEVDDKTSS-----------PKVLSEIKLG 443
LGGN ++K + + L+ ++L+ + + + K + P LSE
Sbjct: 464 LGGNADFMSKIKLREMLMPKVVILSDDEIAFQKKKKIPTRKSWMANENLFPCKLSE---N 520
Query: 444 SSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMN--LKELQKLIDKQSA 501
SSSLA A A + + GK KS + EA++ S + E + + + +L+ SA
Sbjct: 521 SSSLAEAAVQAAVESW-GK---KSLSELEAENRLSYACEKGPTEDAVVAKLRNAFQAISA 576
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQ 561
Y + + +E +V GGLHVIGT HESRRIDNQLRGR+GRQ
Sbjct: 577 EY-----------------KAYTEDERKKVVAAGGLHVIGTERHESRRIDNQLRGRSGRQ 619
Query: 562 GDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEK 621
GDPG++RF +SL+D +F+ F + A+ RI ED+PIE + + L Q E
Sbjct: 620 GDPGTSRFFLSLEDTIFRIFGGERIKALMTAFRI---EDLPIESKMLTKSLDEAQRKVEN 676
Query: 622 YYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP 681
YYF RK Q+F+Y DE++ D
Sbjct: 677 YYFEARK---------------------------------QLFEY-----DEVLNSQRDR 698
Query: 682 LKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPD-L 740
+ R +L +S D L + E +L DI N D L
Sbjct: 699 VYTERKRAL---------------------LSKD-LQPLMMEYSQLTMDDILNANISDEL 736
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSD----DLTKNGRYRATTNLLRKYLGDILIASYLNV 796
PK G+ +S +K++ + D L KN T LR+YL +YL
Sbjct: 737 PKEEWDLEGL---ASKVKQYCFLLDDLSVEVLLKNA---DTIESLREYLHKRGREAYL-- 788
Query: 797 VQESRYD-----DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEY 851
E R D M E ER ++ +D W++HL + + AV +R + R+PL EY
Sbjct: 789 --EKRADVEKQAPGLMHEAERYYVLTQVDKLWKEHLQALKFIQQAVGLRGYAQRDPLIEY 846
Query: 852 KIDGCRFFISMLSATRRLTVESLVQY 877
K++G F+ M++ RR T+ + Q+
Sbjct: 847 KLEGYNLFLDMMARIRRNTIYCVYQF 872
>gi|254526956|ref|ZP_05139008.1| preprotein translocase, SecA subunit [Prochlorococcus marinus str.
MIT 9202]
gi|221538380|gb|EEE40833.1| preprotein translocase, SecA subunit [Prochlorococcus marinus str.
MIT 9202]
Length = 733
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 315/685 (45%), Positives = 421/685 (61%), Gaps = 71/685 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+ IAEMKT VVTVNDYLA+RDA
Sbjct: 64 MRHFDVQLIGGMVLHECQIAEMKTGEGKTLVATLPCYLNALTGKGVHVVTVNDYLARRDA 123
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ER+ NY CDITY NSELGFDYLRDN+A + ++V
Sbjct: 124 EWMGQVHRFLGLSVGLIQQDMNPFERKKNYDCDITYATNSELGFDYLRDNMATDVNEVVQ 183
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA+++ LV+
Sbjct: 184 R---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAQLSLKLVKAKELSKDGI 240
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT++G A E L NDL++ DPWA ++ NALKAKE + +DV
Sbjct: 241 DPEGDYEVDEKQRSCILTDQGFAKCEEYLGVNDLYNPKDPWAHYITNALKAKELFIKDVN 300
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YI++N +A+I++E TGRV RRWS+G HQA+EAKE L+IQ ++ +A ITYQ+ F LYP
Sbjct: 301 YIIKNNEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLQIQPETQTLASITYQNFFLLYP 360
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
L+GMTGTAKTEE EF K +++ +PTN R D Q F T GKW+ +E ++
Sbjct: 361 GLAGMTGTAKTEEVEFEKTYKLESTVIPTNQVRKRKDWSDQVFKTEIGKWKAVAKETANI 420
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE +AQAGR A+TI+
Sbjct: 421 HRDGRPVLVGTTSVEKSELLSSLLFEEKIPHNLLNAKPENVEREAEIIAQAGRAGAVTIA 480
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVL-SEIKLGSS 445
TNMAGRGTDIILGGN +A+ +++ L+ LL + + + K PK S+ K G S
Sbjct: 481 TNMAGRGTDIILGGNSDYMARLKLKEILIPLLVKP----DNEHKPPIPKQRNSKSKGGFS 536
Query: 446 SLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK-LIDKQSAMYP 504
A ++ L K + + + + E++E S+ EL K D+Q ++
Sbjct: 537 KKA----SSNLKKDISNSSTSLFPCK-----LDEAIEKQLSLLSDELVKNWGDRQLSVLE 587
Query: 505 LGPTVAL-----------------TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHES 547
L +A + +V K+ E ++E +V++ GGLHVIGT HES
Sbjct: 588 LDDRIATAAEKAPTDDDLIKLLRESLSAVKKEYEKVLTHEEEKVRKAGGLHVIGTERHES 647
Query: 548 RRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDA 607
RR+DNQLRGRAGRQGD GSTRF +SL+D + + F D +L++ DEDMPIE
Sbjct: 648 RRVDNQLRGRAGRQGDLGSTRFFLSLEDNLLRIFGGDR--VANLMNAFRVDEDMPIESGM 705
Query: 608 IVRQLLGLQISAEKYYFGIRKSLVE 632
+ R L Q E YY+ IRK + +
Sbjct: 706 LTRSLESAQKKVETYYYDIRKQVFD 730
>gi|302804001|ref|XP_002983753.1| hypothetical protein SELMODRAFT_156007 [Selaginella moellendorffii]
gi|300148590|gb|EFJ15249.1| hypothetical protein SELMODRAFT_156007 [Selaginella moellendorffii]
Length = 897
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 365/925 (39%), Positives = 506/925 (54%), Gaps = 147/925 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 47 LRPFDVQLIGGMVLHKGQIAEMKTGEGKTLVAVLPAYLNALSGQGVHVVTVNDYLARRDA 106
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++ RFLGL VGLIQ+GM ERR+NY DITY NSELGFDYLRDNLA + + LV+
Sbjct: 107 EWVGQIPRFLGLKVGLIQQGMDSAERRTNYGSDITYVTNSELGFDYLRDNLALSPDDLVL 166
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F+F ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV+ K
Sbjct: 167 ---PSFNFCVIDEVDSILIDEARTPLIISGPAEKPTDRYYKAAKIAAAFARDVHYTVDEK 223
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV +TEEG AE L+ DL+D + WA +V+NA+KAKE + +DV YIVR LI+
Sbjct: 224 QKSVLITEEGYEAAEEILDVKDLYDPREQWASYVINAIKAKELFLKDVNYIVRGEDVLIV 283
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRW++G+HQAVEAKE L +Q ++V +A I+YQ+ F YP+L GMTGTA T
Sbjct: 284 DEFTGRALPGRRWNDGLHQAVEAKESLPVQNETVALASISYQNFFLQYPRLCGMTGTAAT 343
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++++ V VPTN IR D F GKW E+ M + GRPVLVG+
Sbjct: 344 ERSEFEKIYKLSVAVVPTNRAMIRKDESDVVFRAVTGKWTAVVVEIARMHKAGRPVLVGT 403
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS L + IPH +LNA+P+ RE+E +AQ+GR A+T++TNMAGRGTDII
Sbjct: 404 TSVEQSESLSKQLSEANIPHQILNAKPENVERESEIIAQSGRVGAVTLATNMAGRGTDII 463
Query: 398 LGGNPKMLAKKIIEDRLL---LLLTREALNVEVDDKTSS-----------PKVLSEIKLG 443
LGGN ++K + + L+ ++L+ + + + K + P LSE
Sbjct: 464 LGGNADFMSKIKLREMLMPKVVILSDDEIAFQKKKKIPTRKSWMVNENLFPCKLSE---N 520
Query: 444 SSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMN--LKELQKLIDKQSA 501
SSSLA A A + + GK KS + EA++ S + E + + + +L+ SA
Sbjct: 521 SSSLAEAAVQAAVESW-GK---KSLSELEAENRLSYACEKGPTEDAVVAKLRSAFQAISA 576
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQ 561
Y + + +E +V GGLHVIGT HESRRIDNQLRGR+GRQ
Sbjct: 577 EY-----------------KAYTEDERKKVVAAGGLHVIGTERHESRRIDNQLRGRSGRQ 619
Query: 562 GDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEK 621
GDPG++RF +SL+D +F+ F + A+ RI ED+PIE + + L Q E
Sbjct: 620 GDPGTSRFFLSLEDTIFRIFGGERIKALMTAFRI---EDLPIESKMLTKSLDEAQRKVEN 676
Query: 622 YYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP 681
YYF RK Q+F+Y DE++ D
Sbjct: 677 YYFEARK---------------------------------QLFEY-----DEVLNSQRDR 698
Query: 682 LKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLP 741
+ R +L L K+ + + ++ ++ D +L + +I+N +LP
Sbjct: 699 VYTERKRAL--LSKDLQPLMME-----YSQLTMDDILNA----------NISN----ELP 737
Query: 742 KPPNLFRGIRRKSSSLKRWLAICSD----DLTKNGRYRATTNLLRKYLGDILIASYLNVV 797
K G+ +S +K++ + D L KN T LR+YL +YL
Sbjct: 738 KEEWDLEGL---ASKVKQYCFLLDDLSVEVLLKNA---DTFESLREYLHKRGREAYL--- 788
Query: 798 QESRYD-----DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
E R D M E ER ++ +D W++HL + + AV +R + R+PL EYK
Sbjct: 789 -EKRADVEKQAPGLMHEAERYYVLTQVDKLWKEHLQALKFIQQAVGLRGYAQRDPLIEYK 847
Query: 853 IDGCRFFISMLSATRRLTVESLVQY 877
++G F+ M++ RR T+ + Q+
Sbjct: 848 LEGYNLFLDMMARIRRNTIYCVYQF 872
>gi|548910|sp|Q06461.1|SECA_ANTSP RecName: Full=Protein translocase subunit SecA
gi|288998|emb|CAA45961.1| secA [Antithamnion sp.]
gi|445058|prf||1908375A secA gene
Length = 878
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 297/705 (42%), Positives = 424/705 (60%), Gaps = 82/705 (11%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
FDVQ+IG +L+ G IAEMKT +VTVN+YLA+RDA
Sbjct: 76 FDVQLIGAIILNQGKIAEMKTGEGKTLVAMLTAYLNSLFNKGVHIVTVNEYLAKRDATLA 135
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ +L + +G+I + M +ER+ Y CDITY NSELGFDYLRDN+A E LV R
Sbjct: 136 KQIFEYLNIHIGIIDQSMHSQERKKQYSCDITYLTNSELGFDYLRDNMAIQKEDLVQR-- 193
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
F FAI+DE+DS+LIDE R PL+ISG A+ + Y A KVA LL Q Y ++ KN +
Sbjct: 194 -DFFFAIIDEIDSILIDEARTPLIISGPANNKLTEYLEANKVANLLNQNTDYEIDEKNKN 252
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINEL 220
+ L E GI +E L+ N+L+D PW ++++NALKAKE + ++ YIV+N + +I++E
Sbjct: 253 IILNENGIKKSENILDINNLYDIQKPWIKYILNALKAKEIFIKNKDYIVKNNEIVIVDEF 312
Query: 221 TGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEK 280
TGR+ E RRWS+G+HQA+EAKE KIQ ++ +A ITYQ+LF LY KLSGMTGTAKTEE
Sbjct: 313 TGRIMEGRRWSDGLHQAIEAKEKQKIQQENKTLASITYQNLFLLYEKLSGMTGTAKTEEA 372
Query: 281 EFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSV 340
E +++++ V+E+PTN N R DL + T KW+ E M+++GRP LVG+TS+
Sbjct: 373 ELEQIYKLKVVEIPTNKLNQRKDLSDLVYKTEYVKWKAVANECFDMYQIGRPTLVGTTSI 432
Query: 341 ENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGG 400
E SE L+ +LK+ +P+N+LN +P+ RE+E + QAGRKY ITISTNMAGRGTDIILGG
Sbjct: 433 EKSELLAKILKELQVPYNLLNRKPENITRESEIITQAGRKYTITISTNMAGRGTDIILGG 492
Query: 401 NPKMLAKKIIEDRL--LLLLTREALNVEVDDKTS-------SPKVLSEIKLGSSSLALLA 451
NP++LAK + + +L LT+ N +++++ + + +++ I + S ++
Sbjct: 493 NPQILAKTALTIHINKILNLTQYNTNYKIENEITYILNSINNTLLINNIDINSQDISQSI 552
Query: 452 KAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVAL 511
+ Q+AKS+ K S +Y +
Sbjct: 553 NNIINNN----------MIQDAKSY---------------------KISNIYKI------ 575
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
VL + C NE E+ LGGL+VIGT HESRRIDNQLRGR+GRQGD S+RF +
Sbjct: 576 ----VLNKYKQLCHNEKQEIITLGGLYVIGTERHESRRIDNQLRGRSGRQGDLRSSRFFL 631
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SLQD + + F D D + + DEDMPIE + + L Q E Y++ +RK L
Sbjct: 632 SLQDNLLKIFGGDK--ISDFMQNLNIDEDMPIESSILNKSLSSAQKKIEAYFYDVRKQLF 689
Query: 632 EFDEVLEVQRKHVYDLRQSIL-TGANESCSQQIFQYMQAVVDEII 675
E+DEVL QR+ +Y R+ +L + C I +Y ++ ++E++
Sbjct: 690 EYDEVLNNQRQAIYIERKRLLKSNYTRDC---ILEYAESTIEEML 731
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++E+ L++ +D W++H+ ++ L ++ RS+G ++PL EYK + FI+M++
Sbjct: 800 IRQLEKYYLLQQIDYAWQEHINKISILKESIGWRSYGQQDPLIEYKNEAFNLFINMVTYI 859
Query: 867 RRLTV 871
R+ +
Sbjct: 860 RQTVI 864
>gi|51210033|ref|YP_063697.1| preprotein translocase subunit SecA [Gracilaria tenuistipitata var.
liui]
gi|75289850|sp|Q6B8L3.1|SECA_GRATL RecName: Full=Protein translocase subunit SecA
gi|50657787|gb|AAT79772.1| preprotein translocase secA subunit [Gracilaria tenuistipitata var.
liui]
Length = 882
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/701 (42%), Positives = 419/701 (59%), Gaps = 70/701 (9%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
FDVQ++G VLH G IAEMKT ++TVNDYLA+RD+E
Sbjct: 76 FDVQLVGSIVLHQGQIAEMKTGEGKTIVAITTGYLNALTSKGVHIITVNDYLAKRDSELA 135
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ ++ L VGLI + M EE++ Y CDITY NSELGFDYLRDN+A Q+V R
Sbjct: 136 QKICSYIDLKVGLITQSMTYEEKKRAYDCDITYITNSELGFDYLRDNMAIEFNQIVQR-- 193
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
F+FAI+DEVDS+LIDE R PL+ISG ++ +Y + +A L + L Y ++ K +
Sbjct: 194 -GFNFAIIDEVDSILIDEARTPLIISGPFEIEINKYKKSTSIANTLQKDLDYEIDEKTKN 252
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINEL 220
+ LTE+GI+ E L ++L+D +D W ++++N+LKAK+ + ++ YIV+N + +I++E
Sbjct: 253 ITLTEKGISRCENMLNIDNLYDIHDSWIQYLLNSLKAKDLFLKNQHYIVKNNEIIIVDEF 312
Query: 221 TGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEK 280
TGRV + RRWS+G+HQA+E+KE + IQ ++ +A ITYQ+LF LY KLSGMTGTAKTEE
Sbjct: 313 TGRVMQGRRWSDGLHQAIESKENIPIQQENKTLASITYQNLFLLYEKLSGMTGTAKTEET 372
Query: 281 EFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSV 340
E K++ + V+E+PTN R DLP + T KW+ E M+ +GRP L+G+T+V
Sbjct: 373 ELDKIYNLEVLEIPTNKICKRQDLPDLVYKTEYKKWQAIADECFDMYHIGRPTLIGTTNV 432
Query: 341 ENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGG 400
E SE L+ +L + IP N+LNA+P+ +REAE + QAGRK ITISTNMAGRGTDIILGG
Sbjct: 433 EKSELLAKILMELQIPFNLLNAKPENVSREAEIITQAGRKNTITISTNMAGRGTDIILGG 492
Query: 401 NPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAK-----AAL 455
NP+ L+K L LT N KLG LL +
Sbjct: 493 NPEALSK--------LALTYYLQN----------------KLGLKVNYLLNNIETQITTI 528
Query: 456 LAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLS 515
+ YV QE + +++++ + ++K+I + Y + YL
Sbjct: 529 INNYV-------LDMQELDIYKYKNIDLKKIQYY--IEKIIKNEHTKYSEEEKLQKLYLK 579
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L + + C E EV +LGGL+VIGT HESRRIDNQLRGRAGRQGD G++RF +SL+D
Sbjct: 580 ILSEYKNICYQEKQEVLKLGGLYVIGTERHESRRIDNQLRGRAGRQGDIGASRFFLSLED 639
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
+ + F D L+ + DE PIE + + L Q E Y++ IRK L E+DE
Sbjct: 640 NLLRIFGGDK--ISQLMDNLNIDEHTPIESIILSKSLDSAQKKVESYFYDIRKQLFEYDE 697
Query: 636 VLEVQRKHVYDLRQSILTGA-NESCSQQIFQYMQAVVDEII 675
V+ QR+ +Y R+ IL + C I +Y ++ +DEI+
Sbjct: 698 VINNQRQAIYAERKRILQSSFTRDC---IIEYAESTIDEIL 735
>gi|118411045|ref|YP_874440.1| preprotein translocase subunit A [Phaeodactylum tricornutum]
gi|166918842|sp|A0T0G5.1|SECA_PHATC RecName: Full=Protein translocase subunit SecA
gi|116739792|gb|ABK20663.1| preprotein translocase subunit A [Phaeodactylum tricornutum]
Length = 886
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 336/909 (36%), Positives = 492/909 (54%), Gaps = 134/909 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+D IAEMKT +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNDKKIAEMKTGEGKTLVATLPAYLNALTEKGVHIVTVNDYLANRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLGL+ GLIQ GM +RR NY+ DITY N E+ FD+LRDN+A N + +V+
Sbjct: 135 VSMGQIYRFLGLNTGLIQDGMPNFDRRENYKADITYVTNYEVTFDFLRDNMALNLKDVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LIDE + PL+IS + +Y VAA++ + L HY V+ K
Sbjct: 195 R---PFNYCIIDEVDSILIDEAQTPLIISNNIQTPIEKYIVAAEITDYLELNTHYKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V LTE+G E L DL+D DPW +++NALKA Y +V YIV+N + +I+
Sbjct: 252 NKNVILTEDGSKQIEQILSVQDLYDPRDPWIPYIINALKANALYFNNVHYIVQNNRIIIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW +G+HQA+EAKE L I+ + VA ITYQ+ F LYPKLSGMTGT KT
Sbjct: 312 DEFTGRIMADRRWGDGLHQAIEAKEKLPIRQKTETVAAITYQNFFLLYPKLSGMTGTGKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V ++PT P R DLP + KW Q + ++G+P+LVG+
Sbjct: 372 AETEFEKIYNLSVEQIPTERPTQRKDLPDLIYKDQFSKWNAVAQNCNQIAKIGQPILVGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VE SE L+ LL + + + +LNA+P+ RE+E VAQAG+K +ITI+TNMAGRGTDII
Sbjct: 432 TTVEKSEMLAQLLSEYKLSYQILNAKPENVRRESEIVAQAGKKGSITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +K + D L L V+ ++ + S ++LL+
Sbjct: 492 LGGNINFKIQKKLYDILTL--------VKNFKRSKKENIFS--------------SSLLS 529
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGP-TVALTYL-- 514
++ EG S + S + + +L L+ L + P+ ++ YL
Sbjct: 530 QF----EGSSQKFLSVLVSLSNDQKFLKLSDLDILKILRENDCISIPITSYQCSIRYLID 585
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++ + H E VK LGGL++IGT ++SRR+DNQLRGR GRQGDPG++RF +SL
Sbjct: 586 ELITYNKKHQEQENQIVKNLGGLYIIGTERNDSRRVDNQLRGRCGRQGDPGTSRFFLSLD 645
Query: 575 DEMFQKFSFDTSWAVDLISRITN------DEDMPIEGDAIVRQLLGLQISAEKYYFGIRK 628
D + + F S+I N +D P+E + I + L Q E+ + RK
Sbjct: 646 DNLLRLFGG---------SKIQNFMQTQIPDDSPLESEFITKSLDSAQERVEERAYQQRK 696
Query: 629 SLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
+L ++D+VL QR VY R++IL S + IF Y + ++ E++ LK +
Sbjct: 697 NLFDYDDVLNKQRNIVYHERRNILESI--SVQKNIFAYGEQIITELLI----ELKEDKSC 750
Query: 689 SLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFR 748
+++ A ++++LF G L+ LN I
Sbjct: 751 NIE---------ATNLIENLF----GRNLV--------LNYI------------------ 771
Query: 749 GIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE-SRYDDVYM 807
K+SS L+I + DL++ L+ YL + +Y + + E S Y + +
Sbjct: 772 ----KTSS----LSISNLDLSE----------LKIYLFNEFWLTYQSKITELSIYGEGII 813
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +ER++++ D WR+HL M L AV R +G RNPL EYK D F + R
Sbjct: 814 ENLERSIILINTDRIWREHLQKMTLLREAVGWRGYGQRNPLYEYKQDAFYMFETREELLR 873
Query: 868 RLTVESLVQ 876
L + L++
Sbjct: 874 HLVIYDLLR 882
>gi|255548245|ref|XP_002515179.1| conserved hypothetical protein [Ricinus communis]
gi|223545659|gb|EEF47163.1| conserved hypothetical protein [Ricinus communis]
Length = 980
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 343/919 (37%), Positives = 479/919 (52%), Gaps = 159/919 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 148 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 207
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL + E+LV+
Sbjct: 208 EWVGQVPRFLGLK----------------------------------------SVEELVL 227
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV+ K
Sbjct: 228 RG---FNYCVIDEVDSILIDEARTPLIISGPAEKPSDRYYKAAKIALAFERDIHYTVDEK 284
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LTE+G AE L+ DL+D + WA FV+NA+KAKE + RDV YI+R + LI+
Sbjct: 285 QKTILLTEQGYEDAEEILDVKDLYDPREQWASFVLNAIKAKELFLRDVNYIIRGKEVLIV 344
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA T
Sbjct: 345 DEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAAT 404
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++++ V VPTN P IR D F GKW E+ M + GRPVLVG+
Sbjct: 405 ESTEFESIYKLKVTIVPTNKPMIRKDESDVVFRATTGKWRAVVVEISRMNKTGRPVLVGT 464
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE S+ LS+ L++ GI H VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 465 TSVEQSDALSEQLQEAGISHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 524
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSP-------KVLSEIKLGSSSLALL 450
LGGN + +A+ + + L+ + + A V V K P + L KL + L
Sbjct: 525 LGGNAEFMARLKLREMLMPRVVKPAEGVFVSVKKPPPMKTWKVNESLFPCKLSKKNTDLA 584
Query: 451 AKAALLA-KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
+A LA K G+ +S T EA+ S S E K + +
Sbjct: 585 EEAVQLAVKTWGQ---RSLTELEAEERLSYSCE---------------KGPVQDEVIANL 626
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
+L ++ + +++ E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF
Sbjct: 627 RNAFLEIVAEYKIYTEEERKKVVSAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRF 686
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + + R ED+PIE + + L Q E Y+F IRK
Sbjct: 687 FLSLEDNIFRIFGGDR---IQGLMRAFRVEDLPIESQMLTKALDEAQRKVENYFFDIRKQ 743
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L E+DEVL QR VY R+ L N I +Y + +D+I+ N+ W
Sbjct: 744 LFEYDEVLNSQRDRVYTERRRALKSDN--LQSLIIEYAELTMDDILEANIGSDAPKESWD 801
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
+KL+ + +L+DL PDL
Sbjct: 802 FEKLIAKLQQYC-YLLNDL----------------------------TPDL--------- 823
Query: 750 IRRKSSSLKRWLAICSDDLTKNGR--YRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+R KSSS + D L GR Y +++ K + M
Sbjct: 824 LRSKSSSYEE----LQDYLCLRGREAYLQKRDIVEKEAPGL------------------M 861
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
E ER +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ R
Sbjct: 862 MEAERFLILSNIDRLWKEHLQAIKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIR 921
Query: 868 RLTVESLVQYWSSPMESQE 886
R + S+ Q+ ++++E
Sbjct: 922 RNVIYSIYQFQPVLVKNKE 940
>gi|374249427|ref|YP_005088646.1| secA gene product [Phaeocystis antarctica]
gi|340008118|gb|AEK26750.1| preprotein translocase subunit SecA [Phaeocystis antarctica]
Length = 880
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 339/901 (37%), Positives = 488/901 (54%), Gaps = 142/901 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +L++G IAEMKT VVTVNDYLA+RDA
Sbjct: 78 LRHFDVQLVGGLILNEGKIAEMKTGEGKTLVALLPTFLNALSGQGVHVVTVNDYLARRDA 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E + +VH FLGLSVGLIQ M EER+ NY D+ Y N+ELGFDYLRDN+A +++V
Sbjct: 138 ESVGQVHTFLGLSVGLIQEEMEFEERKENYARDVIYVTNNELGFDYLRDNMAFTVDEIVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF + +VDEVD++LIDE R PL+ISG + +Y K+ + L + +HY+V+ K
Sbjct: 198 R---PFFYCVVDEVDAILIDEARTPLIISGPSKAPTQKYLRTTKLVDTLRKDIHYSVDEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIV-RNGKALI 216
N + L EEG+A E AL T+DL++ DPW +++N++KAKE + R+ YI + +I
Sbjct: 255 NQNATLLEEGLAFCEQALGTSDLYNVEDPWIPYILNSVKAKELFVRNTHYIANEENEIII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR RRWS+G+HQAVEAKEGL IQ +S +A ITYQ+LF LY KLSGMTGTAK
Sbjct: 315 VDEFTGRTMVGRRWSDGLHQAVEAKEGLPIQDESQTLASITYQNLFLLYSKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++ + V+ VPTN R D P + KW+ E M+ LGRPVLVG
Sbjct: 375 TEEVEFEKIYNLQVLPVPTNRSIQRKDFPDLIYKNQYLKWQAIANECLEMYNLGRPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+T++E SE L+ LL + +P+ +LNARP+ E+E +AQAG K AITI+TNMAGRGTDI
Sbjct: 435 TTTIEKSELLAALLTEYQLPYRLLNARPENIESESEIIAQAGCKNAITIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKIIEDRLLL---LLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKA 453
+LGGNPK L + + L+ + + + VD+ ++ K+ +I+
Sbjct: 495 VLGGNPKSLTLSRFQKFISYSKSLVGADQVELSVDELSTLSKLFKDIQF----------- 543
Query: 454 ALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTY 513
Y+ +TY +A + + ++ ++ +EL+ Y
Sbjct: 544 ---PDYI-------YTYDQALQYLEANPDLPVQLS-EELKS-----------------NY 575
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
+ + + + + S V+ LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF +SL
Sbjct: 576 IRIYESDKNIAVADRSIVQNLGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSL 635
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+D++ + F D L+ I E +PI+ + + L Q E YYF IRK L
Sbjct: 636 EDKLLRIFGGDKISG--LMQNIGLQESVPIQSTFLNQSLESAQKKVEAYYFDIRKKL--- 690
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
F+Y QA+ + N ++ R +D L
Sbjct: 691 ------------------------------FEYDQALNTQ---RNGVYIERRRILEIDSL 717
Query: 694 LKEFIAIAGKILDDL--FAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
I A + L D+ F GI+ + LLK+ L + +L P LF+ +
Sbjct: 718 RDWIIEYAERSLYDVVFFMGITQNGLLKT----SILQKVQ-------NLLGTPFLFQPKQ 766
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASY-LNVVQESRYDDVYMKEV 810
S R+++ YL SY L + + ++E+
Sbjct: 767 LDSQEEVRFIS---------------------YLQQQFQISYDLKEAEMKLIEPGLLREL 805
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
ER+ L++ +D W++HL ++ L AV R++G ++PL EYK + FF+ ML+ R
Sbjct: 806 ERSFLLQQIDFSWKEHLQKISALRDAVGWRAYGQKDPLTEYKQEAYNFFVIMLTRIRHRV 865
Query: 871 V 871
V
Sbjct: 866 V 866
>gi|283794935|ref|YP_003359288.1| preprotein translocase subunit SecA [Cryptomonas paramecium]
gi|253981907|gb|ACT46824.1| preprotein translocase subunit SecA [Cryptomonas paramecium]
Length = 878
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 342/904 (37%), Positives = 489/904 (54%), Gaps = 147/904 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FD QI+GG VLH+G IAEM T V+TVN YLA RDA
Sbjct: 77 LRQFDTQIVGGLVLHEGKIAEMATGEGKTLASILPTYTNALYGKGVHVITVNSYLASRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
RVH FLGLSVG++ R M E+R Y DITY N++LGFDYL+DNLA + +V
Sbjct: 137 RCAGRVHEFLGLSVGVVDRNMPHHEKREAYLKDITYITNADLGFDYLKDNLATSLLSIVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASK-DVARYPVAAKVAELLVQGLHYTVEL 156
R PFHF I+DE DS+LIDE + PL+I+G A+K + +Y A +A+ L +G HY +
Sbjct: 197 R---PFHFGILDEADSILIDEAKTPLIIAGNAAKQNTTKYIKADLLAKTLTRGFHYQTDD 253
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ N + TEEG AE L+ +L+ +DPWA +V NALKAKEF+ ++V YIV + +I
Sbjct: 254 RTNGIIFTEEGSLEAEKFLKEENLYKASDPWAPYVFNALKAKEFFFKNVHYIVTQKEVVI 313
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I++ TGR RRWS+G+HQA+E KE + ++++S +A ITYQ+ F +YPKLSGM+GTAK
Sbjct: 314 IDQFTGRAMGGRRWSDGLHQALEVKENVPVRSESNTLASITYQNFFLMYPKLSGMSGTAK 373
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
+EE E ++ + V+ +PT+ +R D + T KWE E + GRPVLVG
Sbjct: 374 SEETELSDIYGLDVVCIPTHKKMLRKDYTNLIYQTEGAKWEAVISECLRIHSYGRPVLVG 433
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+T+++ SE LS LLK +GI HN+LNA+P+ REAE V+QAG +ITI+TNMAGRGTDI
Sbjct: 434 TTNIKKSELLSSLLKDRGIKHNLLNAKPENVEREAEIVSQAGEIASITIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
+LGGN + K +++ L T S S KL +S+ L
Sbjct: 494 LLGGNASHITKCTLKNVL--------------HSTRSNNEQSCYKLNNSN--------RL 531
Query: 457 AKYVGKAEGKSWTYQEAK-----SFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVAL 511
+K+ K K TY+E + S SE E++ L+ ++A + L +
Sbjct: 532 SKF--KRNLKQTTYKENELNAYLSIISEPDEVTD-------HDLLILRAAYFFL---LEK 579
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
T VLK E ++ LGGLHVIGT LH S+RIDNQLRGRAGRQGDPGS+RF +
Sbjct: 580 TQKKVLKKRE--------KIISLGGLHVIGTELHISKRIDNQLRGRAGRQGDPGSSRFFL 631
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+DE+F+ F D L++ + + PIE + QL +Q E Y++ R
Sbjct: 632 SLEDEIFRMFGND--LLKHLLNSLYAEPTAPIETKILSNQLHSIQKKIEDYHYYSRIKTF 689
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIF--QYMQAVVDEIIFGNVDPLKHPRYWS 689
E+DE+L QRK +Y R+ IL + IF +++ +++I ++ R +S
Sbjct: 690 EYDEILNDQRKTIYFERRKIL--------ESIFLKKWIMHYAEQLISNYINEFYKKRDFS 741
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L++ A+A +I LLK+ DL + F
Sbjct: 742 LERR----TALANQI----------KNLLKA------------------DLCIEQSTFLK 769
Query: 750 IRRKS--SSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+KS +++ +++ R NL +KY+ I DD M
Sbjct: 770 ENKKSVGAAISKYI-------------RTIYNLRKKYMDLI--------------DDGLM 802
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
++E L+K +D W+DHL N + L V RS+G ++PL EYK + F+SM + +
Sbjct: 803 NKIECFFLMKEIDDNWKDHLQNTSLLRENVGWRSYGQKDPLIEYKNESHTLFLSMANKIK 862
Query: 868 RLTV 871
R V
Sbjct: 863 RRIV 866
>gi|322418882|ref|YP_004198105.1| preprotein translocase subunit SecA [Geobacter sp. M18]
gi|320125269|gb|ADW12829.1| preprotein translocase, SecA subunit [Geobacter sp. M18]
Length = 958
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 343/925 (37%), Positives = 490/925 (52%), Gaps = 160/925 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHSGKIAEMKTGEGKTLVATLPSYLNGISGKGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R+H+FLGLSVG+I G+ ERR Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 DWMGRIHKFLGLSVGVIVHGLEDYERRDAYAADITYGTNNEFGFDYLRDNMKFDLADYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R PF+FA+VDEVDS+LIDE R PL+ISG +Y + ++ +L +G
Sbjct: 201 R---PFNFAVVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPMLKKGEVIEVEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+TV+ K S LTEEG+ E L+ ++L+D N AL+A
Sbjct: 258 TLSGKRKTYTGDFTVDEKAKSATLTEEGVLKVEKLLKIDNLYDPRNMEMLHHTQQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
++RDV Y+VR+ + +I++E TGR+ RRWS+G+HQA+EAKEG KI+ ++ +A IT+
Sbjct: 318 ALFKRDVDYVVRDNEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGAKIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE EF K++ + V+ +PTN P +R D P + T R K+
Sbjct: 378 QNYFRMYAKLSGMTGTADTEAVEFHKIYNLEVVVIPTNRPLLRPDFPDVIYKTEREKFNA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
E++ + G+PVLVG+ S+E SE LS+LLK+QGIPH VLNA K REAE VAQAG
Sbjct: 438 VIAEIKELHVKGQPVLVGTISIEKSEQLSELLKRQGIPHFVLNA--KQHEREAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK----IIEDRLLLLLTREALNVEVDDKTSSP 434
R +TI+TNMAGRGTDI+LGGNP LA++ E R LL EA+ ++D + P
Sbjct: 496 RMGMVTIATNMAGRGTDIVLGGNPDGLARQEFGGTPETRAEELL--EAIGKALED--NQP 551
Query: 435 KVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQK 494
L + + A L+A Y+ K E Q++ L ELQ+
Sbjct: 552 NELVQ----TLERDFPGIAPLVAAYL-------------KDHPEPDFEELQALVLPELQR 594
Query: 495 LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
D + V K+ V C+ E EV LGGLH++GT HESRRIDNQL
Sbjct: 595 RFD----------------MLVDKNKPV-CAAEHDEVVALGGLHILGTERHESRRIDNQL 637
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLI-SRITNDEDMPIEGDAIVRQLL 613
RGR+GRQGDPGS+RF +SL+D++ + F S V +I ++ +E I I R +
Sbjct: 638 RGRSGRQGDPGSSRFYLSLEDDLLRIFG---SERVSMIMDKLGIEEGEAITHGLITRAIE 694
Query: 614 GLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDE 673
Q E + F IRK L+E+D+V+ QR+ +Y R+ IL G NE Q + V +
Sbjct: 695 NAQKKVEAHNFEIRKHLIEYDDVMNKQREVIYTQRKEILAG-NE-IRQSFLGMLDETVTD 752
Query: 674 IIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDIN 733
++ V R W + + G LD I+ + +
Sbjct: 753 VVNAFVIDRTSAREWDWQGITDTVYRVFGFHLD-----ITAEQI---------------- 791
Query: 734 NFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASY 793
D P N +R SSS +R+ + ++ GD L+
Sbjct: 792 -----DRVTPVNFDETVR--SSSRERFTSKVNE------------------FGDELMDHL 826
Query: 794 LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
+ V ++++ +D W+DHL++++ L + +R +G ++P +EYK
Sbjct: 827 IKV-----------------IMLQVIDAQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKR 869
Query: 854 DGCRFFISMLSATRRLTVESLVQYW 878
+ + F+ M++ R+ VE + +W
Sbjct: 870 EAYQLFMDMMNRIRQEVVEKI--FW 892
>gi|449018840|dbj|BAM82242.1| chloroplast preprotein translocase SecA subunit [Cyanidioschyzon
merolae strain 10D]
Length = 1011
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 342/917 (37%), Positives = 476/917 (51%), Gaps = 105/917 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT------------------------VVTVNDYLAQRD 36
MR FDVQ++GG L G +AE+ T VVTVNDYL +RD
Sbjct: 166 MRPFDVQVLGGLALFHGCVAEIATGEGKTLIATMPACASALAARGTVLVVTVNDYLCRRD 225
Query: 37 AEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLV 96
E M ++R LG SVG + R+ Y CDITY N+ELGFDYLRD+L ++ V
Sbjct: 226 FENMGPLYRSLGFSVGCVTSATERAARQRAYACDITYVTNAELGFDYLRDHLVLSAADQV 285
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
+ PKPF+F ++DE DS++IDE R PL+IS A +Y AAK+A L + HYTV
Sbjct: 286 LVRPKPFYFCLLDEADSIMIDEARTPLIISQAAEAPTEKYATAAKLAANLQRDRHYTVYE 345
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LT G E AL+ L+ DPWA FV+NALKAKE Y+RD+ Y+VR + LI
Sbjct: 346 KERNVTLTGAGYEACEEALQVPTLFAAADPWAPFVLNALKAKELYQRDIDYVVRGDQVLI 405
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV + RRWSEG+HQA+EAKEGL ++ + VA I+YQS F+L+P+L+GMTGTA
Sbjct: 406 VDEFTGRVLQGRRWSEGLHQAIEAKEGLAVRTEPRTVASISYQSFFRLFPRLAGMTGTAA 465
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
T+ E + + + V+ VPT LP +R D P F T+RGK E+ + PVLVG
Sbjct: 466 TDAAEIRETYGLEVVVVPTALPVVRRDYPDVVFRTSRGKLLAVVAEIRRLHLRKVPVLVG 525
Query: 337 STSVENSEYLSDLLKQ-QGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
+TS+E SE +S LL + + +PH VLNARP+ A RE+E +AQAGR A+TI+TNMAGRGTD
Sbjct: 526 TTSIEASERISALLSEGERVPHEVLNARPENAERESEIIAQAGRLGAVTIATNMAGRGTD 585
Query: 396 IILGGNPKMLAKKIIEDRLLLLLTREALNVEVD----DKTSSPKVLSEIKLGSSSLALLA 451
I+LGGN LA+ +++ LL AL E D+ S+ LS ++
Sbjct: 586 IVLGGNVSSLARALLQRELLATF---ALGPECSSGAGDRASTEHFLSCLEEAEHH----- 637
Query: 452 KAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLK--ELQKLIDKQSAMYPLGPTV 509
+ + + +A + ES+E + L+ E Q+ SA
Sbjct: 638 QLHCFGEKIAEALRSQRSTDPGPRLIIESMEQLHQLMLQAAEFQEPTLPFSAEAQELVRE 697
Query: 510 ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 569
AL +L K E + V LGGLH++GT HESRRIDNQLRGRAGRQGDPG +RF
Sbjct: 698 ALQWLE--KQLRPRLDAERAAVLDLGGLHILGTERHESRRIDNQLRGRAGRQGDPGCSRF 755
Query: 570 MVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
+SL+D +F+ F D + R+ DE PIE + R L +Q S E+YY GIRK
Sbjct: 756 FLSLEDPIFRVFGGDRMARLAEAFRL--DETTPIESVQVARTLDNVQRSIEQYYAGIRKQ 813
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L +DEVL QRK +Y R L A+E+ ++FG+
Sbjct: 814 LFAYDEVLSQQRKVLYRQRNRFLE-ADEA---------------LLFGS----------- 846
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
A + AG++GD + +I+++ + N D + K F G
Sbjct: 847 ---------DAAAARASGVLAGLAGDWIRTTIQDILQANRRDPAKC----VQKLKAFFPG 893
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLG--DILIASYLNVVQESRYDDVYM 807
S + AI R +L++ D+ + YL +VQ
Sbjct: 894 ALLNESMCQSAAAIDQVAAAVGVRLSQHRRMLQQSAPQQDVAVFRYLALVQH-------- 945
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
D W +HL + L ++++ +PL++Y+ D + F M++ R
Sbjct: 946 ------------DQLWSEHLRKLALLRDMSSLQTLRQVDPLQQYQQDSFQLFEQMMAQIR 993
Query: 868 RLTVESLVQYWSSPMES 884
R TV S +Y P S
Sbjct: 994 RNTVYSFFKYSPGPTVS 1010
>gi|71842302|ref|YP_277390.1| preprotein translocase subunit SecA [Emiliania huxleyi]
gi|122220080|sp|Q4G377.1|SECA_EMIHU RecName: Full=Protein translocase subunit SecA
gi|60101545|gb|AAX13889.1| preprotein translocase subunit SecA [Emiliania huxleyi]
gi|336286214|gb|AEI29550.1| preprotein translocase subunit SecA [Emiliania huxleyi]
Length = 881
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 299/694 (43%), Positives = 411/694 (59%), Gaps = 71/694 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
++HFDVQ+IGG VL+DG IAEMKT VVTVNDYLA+RDA
Sbjct: 77 IKHFDVQLIGGLVLNDGQIAEMKTGEGKTIVALLPTFLNALYGKGVHVVTVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E + RVHRFLGL+VGLIQ M PEER+ NY+CD+ Y N+ELGFDYLRDN+A E++V
Sbjct: 137 ETVGRVHRFLGLTVGLIQEDMSPEERKQNYQCDVVYVTNNELGFDYLRDNMAFTQEEVVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P + +VDEVDS+LIDE R PL+ISG + +Y +++A +L + +HY ++ K
Sbjct: 197 R---PLFYCVVDEVDSILIDEARTPLIISGPSEAPTQKYLQTSQLARVLQKNIHYIIDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR-NGKALI 216
N V+LT+EG E AL+ DL+ +DPW +V+N++KAKE + R+ YIV + +I
Sbjct: 254 NQVVKLTDEGTLFCEQALKIADLYSPSDPWISYVLNSIKAKELFIRNTHYIVNVEEEVII 313
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR RRWS+G+HQA+E+KE L IQ +S +A ITYQ+LF LY KLSGMTGTAK
Sbjct: 314 VDEFTGRTMAGRRWSDGLHQAIESKENLPIQDESQTLASITYQNLFLLYDKLSGMTGTAK 373
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++ + VI +PT+ R D P + KW+ E M + RPVL+G
Sbjct: 374 TEELEFEKIYGLKVIPIPTHRDVKRKDFPDLVYKNQYLKWQAIANECIKMNEIDRPVLIG 433
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+T++E SE L+ LL + +P+ +LNARP+ EAE V+QAG + AITISTNMAGRGTDI
Sbjct: 434 TTTIEKSELLAALLSEYNVPYRLLNARPENIESEAEIVSQAGCRGAITISTNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA-- 454
LGGN + L K ++ K +S+ L S+ + + K+A
Sbjct: 494 ALGGNLESLLKVKLK-----------------------KFISD--LVSADFSTVLKSAQF 528
Query: 455 --LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALT 512
L +V E + S + +E + + + D +A
Sbjct: 529 DEFLVSFVPVFETFGLSKLNESSVREDLLEYLNEGIIPDRSDITDFITA----------- 577
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y S LK+ E + + +LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 578 YNSFLKERAAILLEEKTLITKLGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFFLS 637
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L D++ + F D ++L+ I ++D PI+ + + L Q E YYF RK L E
Sbjct: 638 LDDKLLRLFGGDQ--ILNLLQNIGLEDDAPIQSPILTKSLESAQKKVEVYYFDSRKQLFE 695
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQY 666
+D+ L +QR +Y R+ +L ES I +Y
Sbjct: 696 YDQALTMQRNGIYSERKRVL--EKESLRDWIIEY 727
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER+ L++ +D W++HL ++ L ++ RS+G R+PL +YK + F++ML+
Sbjct: 804 MRELERSFLLQQIDFSWKEHLQKISALRDSIRWRSYGQRDPLTDYKKESYSTFVTMLNRI 863
Query: 867 RRLTV 871
R +
Sbjct: 864 RHQVI 868
>gi|60202588|gb|AAX14680.1| preprotein-translocase subunit A [Phaeodactylum tricornutum]
Length = 886
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 333/909 (36%), Positives = 489/909 (53%), Gaps = 134/909 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+D IAEMKT +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNDKKIAEMKTGEGKTLVATLPAYLNALTEKGVHIVTVNDYLANRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLGL+ GLI GM +RR NY+ DITY N E+ FD+LR N+A N + +V+
Sbjct: 135 VSMGQIYRFLGLNTGLIHEGMPNFDRRENYKADITYVTNYEVTFDFLRGNMALNLKDVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LI E + PL+IS + +Y VAA++ + L HY V+ K
Sbjct: 195 R---PFNYCIIDEVDSILIGEAQTPLIISNNIQTPIEKYIVAAEITDYLELNTHYKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V LTE+G E L DL+D DPW +++NALKA Y +V YIV+N + +I+
Sbjct: 252 NKNVILTEDGSKQIEQILSVQDLYDPRDPWIPYIINALKANALYFNNVHYIVQNNRIIIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW +G+HQA+EAKE L I+ + VA ITYQ+ F LYPKLSGMTGT KT
Sbjct: 312 DEFTGRIMADRRWGDGLHQAIEAKEKLPIRQKTETVAAITYQNFFLLYPKLSGMTGTGKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V ++PT P R DLP + KW Q + ++G+P+LVG+
Sbjct: 372 AEAEFEKIYNLSVEQIPTERPTQRKDLPDLIYKDQFSKWNAVAQNCNQIAKIGQPILVGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VE SE L+ LL + + + +LNA+P+ RE+E VAQAG+K +ITI+TNMAGRGTDII
Sbjct: 432 TTVEKSEMLAQLLSEYKLSYQILNAKPENVRRESEIVAQAGKKGSITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +K + D L L V+ ++ + S ++LL+
Sbjct: 492 LGGNINFKIQKKLYDILTL--------VKNFKRSKKENIFS--------------SSLLS 529
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGP-TVALTYL-- 514
++ EG S + S + + +L L+ L + P+ ++ YL
Sbjct: 530 QF----EGSSQKFLSVLVSLSNDQKFLKLSDLDILKILRENDCISIPITSYQCSIRYLID 585
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++ + H E VK LGGL++IGT ++SRR+DNQLRGR GRQGDPG++RF +SL
Sbjct: 586 ELITYNKKHQEQENQIVKNLGGLYIIGTERNDSRRVDNQLRGRCGRQGDPGTSRFFLSLD 645
Query: 575 DEMFQKFSFDTSWAVDLISRITN------DEDMPIEGDAIVRQLLGLQISAEKYYFGIRK 628
D + + F S+I N +D P+E + I + L Q E+ + RK
Sbjct: 646 DNLLRLFGG---------SKIQNFMQTQIPDDSPLESEFITKSLDSAQERVEERAYQQRK 696
Query: 629 SLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
+L ++D+VL QR VY R++IL S + IF Y + ++ E++ LK +
Sbjct: 697 NLFDYDDVLNKQRNIVYHERRNILESI--SVQKNIFAYGEQIITELLI----ELKEDKSC 750
Query: 689 SLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFR 748
+++ A ++++LF G L+ LN I
Sbjct: 751 NIE---------ATNLIENLF----GRNLV--------LNYI------------------ 771
Query: 749 GIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE-SRYDDVYM 807
K+SS L+I + DL++ L+ YL + +Y + + E S Y + +
Sbjct: 772 ----KTSS----LSISNLDLSE----------LKIYLFNEFWLTYQSKITELSIYGEGII 813
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +ER++++ D WR+HL M L AV R +G RNPL EYK D F + R
Sbjct: 814 ENLERSIILINTDRIWREHLQKMTLLREAVGWRGYGQRNPLYEYKQDAFYMFETREELLR 873
Query: 868 RLTVESLVQ 876
L + L++
Sbjct: 874 HLVIYDLLR 882
>gi|118411176|ref|YP_874570.1| preprotein translocase subunit A [Thalassiosira pseudonana]
gi|118411230|ref|YP_874624.1| preprotein translocase subunit A [Thalassiosira pseudonana]
gi|166919135|sp|A0T0V8.1|SECA_THAPS RecName: Full=Protein translocase subunit SecA
gi|116739923|gb|ABK20793.1| preprotein translocase subunit A [Thalassiosira pseudonana]
gi|116739977|gb|ABK20847.1| preprotein translocase subunit A [Thalassiosira pseudonana]
Length = 878
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 330/913 (36%), Positives = 491/913 (53%), Gaps = 157/913 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+ G I+EM+T +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNSGKISEMRTGEGKTLVATLPAYLNALTDKGVHIVTVNDYLASRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLGL GLIQ M ER+ NY+ +ITY N+E+ FDYLRDN+A+N Q+V+
Sbjct: 135 ISMGQIYRFLGLDTGLIQEDMAFLERQQNYKAEITYVTNNEVAFDYLRDNMASNLSQVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
PF++ IVDEVDS+ IDE + PL+IS + +Y VAA+VAE L +H+ V+ K
Sbjct: 195 ---PPFNYCIVDEVDSIFIDEAQVPLIISQAVETCIDKYIVAAEVAEYLEVNVHFKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N ++ LTE+G A E L+ DL++ NDPW ++++A+KA + R+V YIV+N + +I+
Sbjct: 252 NRNIILTEQGTAQIEKILQVEDLYNPNDPWIPYILSAIKATALFFRNVHYIVQNNQIIIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW+EG+HQAVEAKEG+ I+ ++ A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 312 DEFTGRIMPDRRWNEGLHQAVEAKEGVPIRQNTETAASITYQNFFLLYPKLSGMTGTAKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ +PV E+PT PN+R DLP + + KW +E +S+ +P+L+G+
Sbjct: 372 SEVEFEKIYNLPVEEIPTARPNLRKDLPDFVYKDSLTKWTAIARECKSIANTKQPILIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VENSE L+DLL++ + + +LNA+P+ RE+E VAQAG +ITI+TNMAGRGTDII
Sbjct: 432 TTVENSEMLADLLQEYQLSYRLLNAKPENVKRESEIVAQAGEIGSITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALN-------VEVDDKTSSPKVLSEIK--LGSSSLA 448
LGGN +K + + L+ ++ L + +D K +S K LS + L
Sbjct: 492 LGGNTTFKVRKQLYNILVSYKSKTNLTKLNTIFPLAIDIKFTSQKFLSVLNSLLNDPKFL 551
Query: 449 LLAKAALLAKYVGKAEG---KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPL 505
L+ +L K++ + + TYQ + F L EL K K +
Sbjct: 552 SLSSTGIL-KFLNEIDQIRIPKITYQCSIKFL-----------LNELSKFEKKNQTI--- 596
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
+ VK LGGL++IGT + SRRIDNQLRGR GRQGDPG
Sbjct: 597 ---------------------DNKIVKNLGGLYIIGTERNNSRRIDNQLRGRCGRQGDPG 635
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITND--EDMPIEGDAIVRQLLGLQISAEKYY 623
++RF +SL+D +F+ F + L + + N +D+P+E + + + L Q E+
Sbjct: 636 TSRFFLSLEDSLFRNFG-----SSKLQNFMQNQLLDDLPLESNLLTKSLDAAQKRVEERD 690
Query: 624 FGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK 683
+ RK L ++D++L QR VY R+ +L ++S + I Y + V+ +II LK
Sbjct: 691 YDGRKYLFDYDDILNKQRNIVYYERRKLL--ESQSLRETILAYGEQVIKDII----TLLK 744
Query: 684 HPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIE-ELPELNSIDINNFYFPDLPK 742
P++ + +++E T L S+ +L L+S ++ + F +
Sbjct: 745 DPKFPKTNSMIEELFK----------------TRLVSLNSDLNSLDSFELKTYLFQEF-- 786
Query: 743 PPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRY 802
+ ++ L+ IC T L+R + I++ Y
Sbjct: 787 ------WLSYETKVLE--FEICQ------------TGLIRSFERTIILY----------Y 816
Query: 803 DDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
D+ KE HL + L AV RS+G RNPL E+K + F
Sbjct: 817 TDIAWKE----------------HLQKIALLRDAVGWRSYGQRNPLFEFKEEAYNLF--- 857
Query: 863 LSATRRLTVESLV 875
R +T+ L+
Sbjct: 858 --QNRNITIRHLL 868
>gi|299830424|ref|YP_003734639.1| preprotein translocase subunit SecA [Kryptoperidinium foliaceum]
gi|297385126|gb|ADI40424.1| preprotein translocase subunit SecA [Kryptoperidinium foliaceum]
Length = 886
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 330/901 (36%), Positives = 473/901 (52%), Gaps = 118/901 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+D IAEMKT +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNDQKIAEMKTGEGKTLVATLPACLNALTNKGVHIVTVNDYLAGRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLG GLIQ M ER+ NY DITY N EL FDYLRDN+A N +V+
Sbjct: 135 TTMGQIYRFLGFDTGLIQNDMTSVERKKNYNADITYVTNYELTFDYLRDNMALNLSDVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LIDE + PL+IS V +Y +A+++ L +HY V+ K
Sbjct: 195 R---PFNYCIIDEVDSILIDEAQTPLIISDNMETSVDKYIIASEITNYLEVNIHYKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V LT++G E L DL+D DPW +V+NA+KA + +V YIV+N + +I+
Sbjct: 252 NKNVILTDQGSKQIEQILSIQDLYDVRDPWIPYVINAIKANALFLNNVHYIVQNDRIVIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW +G+HQA+EAKE L I+ + A ITYQ+ F LYPKLSGMTGT KT
Sbjct: 312 DEFTGRIMPDRRWGDGLHQAIEAKEKLPIRQTTETAASITYQNFFLLYPKLSGMTGTGKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V E+PT P +R DLP + KW Q + G+P+L+G+
Sbjct: 372 AEIEFEKIYNLSVEEIPTARPALRQDLPDLIYKDQFSKWSAIAQTCNQLSSAGQPILIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VE SE L+ LL + + + +LNA+P+ RE+E VAQAG+K AITI+TNMAGRGTDII
Sbjct: 432 TTVEKSEMLAQLLNEYNLSYQLLNAKPENVRRESEIVAQAGKKGAITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + + +K + D L + A N + K + + + SSS L ++L
Sbjct: 492 LGGNIRFIVQKELYDILTI-----ARNYVLSKKLNILQSPLKSSFNSSSQTFL---SVLF 543
Query: 458 KYVGKAEGKSWTYQEAKSFFSES--VEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLS 515
+ + + E+ V + + L ++ LID+ S Y
Sbjct: 544 SLLSDQRFLQLSDIDILRILRETDKVSIPTTSYLCSIKFLIDELSRHY------------ 591
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+ + E VK LGGL++IGT ++SRR+DNQLRGR RQGDPG++RF +SL D
Sbjct: 592 -----KKYQEQENKIVKNLGGLYIIGTERNDSRRVDNQLRGRCARQGDPGTSRFFLSLDD 646
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
+ + F S D + D D P+E + + R L Q E+ + RK+L ++D+
Sbjct: 647 NLLRLFG--GSKIQDFMQTQMLD-DSPLESNFLTRSLDSAQERVEERAYQQRKNLFDYDD 703
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
+L QR+ +Y R+SIL A S + I Y + ++ +I+F LK + S ++L
Sbjct: 704 ILNKQRRIIYFERRSILNSA--SNQRNILAYGEQIITDILF----ELKKEKI-SNQEILS 756
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
F + G L + S L + L EL +I N F
Sbjct: 757 LFENLFGTDLSKFYTQTSKSLLTEF--NLAELKTILFNEF-------------------- 794
Query: 756 SLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVL 815
WL Y++ N L Y GD N+ + +ER+++
Sbjct: 795 ----WLT-----------YQSKINELEVY-GD-------NICE----------NLERSII 821
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
+ +D WR+HL M L AV R +G RNPL EYK + F R + + L+
Sbjct: 822 LINIDKIWREHLQRMTLLREAVGWRGYGQRNPLYEYKQEAFYLFEDRQKTLRHVVIYDLL 881
Query: 876 Q 876
+
Sbjct: 882 R 882
>gi|330850899|ref|YP_004376649.1| preprotein translocase subunit A [Fistulifera sp. JPCC DA0580]
gi|328835719|dbj|BAK19015.1| preprotein translocase subunit A [Fistulifera sp. JPCC DA0580]
Length = 886
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 325/902 (36%), Positives = 479/902 (53%), Gaps = 120/902 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+D IAEMKT +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNDQKIAEMKTGEGKTLVATLPAFLNAITNKGVHIVTVNDYLANRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLGL+ GLIQ GM ER+ NY DITY N E+ FD+LRDN+ N +V+
Sbjct: 135 VSMGQIYRFLGLNTGLIQDGMTTAERKLNYNADITYVTNYEVTFDFLRDNMTLNLNDVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LIDE + PL+IS V +Y +AA++ + L HY V+ K
Sbjct: 195 R---PFNYCIIDEVDSILIDEAQTPLIISNNIQTPVDKYIIAAEITDYLELNTHYKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V LTE+G E L DL+D DPW +++NALKA Y +V YIV+N + +I+
Sbjct: 252 NKNVILTEDGSRQIEKILSIQDLYDPRDPWIPYIINALKANALYFNNVHYIVQNNRIIIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW +G+HQA+EAKE L+I+ + VA ITYQ+ F LYPKLSGMTGT KT
Sbjct: 312 DEFTGRIMPDRRWGDGLHQAIEAKENLQIRQKTETVAAITYQNFFLLYPKLSGMTGTGKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V E+PT P R DLP + KW Q ++ G+P+L+G+
Sbjct: 372 TEIEFEKIYNLSVEEIPTAQPKKRKDLPDLIYKDQFSKWTAVAQACNNIASTGQPILIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VE SE L+ LL + + + +LNA+P+ RE+E VAQAG+K +ITI+TNMAGRGTDII
Sbjct: 432 TTVEKSEMLAQLLNEYKLSYQILNAKPENVRRESEIVAQAGQKGSITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +K + D +L L++ KL S L ++ LL
Sbjct: 492 LGGNINFKIQKTLYD--ILTLSKNY------------------KLSKRSNIL--ESELLK 529
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGP-TVALTYL-- 514
++ EG S + + +L L+ L + P+ ++ +L
Sbjct: 530 QF----EGSSQRFLSVLLSLLNDQKFLILSDLDILRILRENDRISIPVASYQCSIRFLIN 585
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++ + + + E VK LGGL++IGT ++SRR+DNQLRGR GRQGDPG++RF +SL
Sbjct: 586 ELIFQNKKYQNQENKIVKNLGGLYIIGTERNDSRRVDNQLRGRCGRQGDPGTSRFFLSLD 645
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D + + F + + ++ P+E + I + L Q E+ + RK+L ++D
Sbjct: 646 DNLLRLFG---GPKLQNFMQTQIPDNSPLESEIITKSLDSAQERVEERAYQQRKNLFDYD 702
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+VL QR VY R+ IL A S + IF Y + ++ E++ + +++
Sbjct: 703 DVLNKQRNIVYYERRQILESA--SVEKNIFAYGEQIITELLL----EFREEKFYE----- 751
Query: 695 KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKS 754
KE + +L++LF + +L I ++ +L INNF S
Sbjct: 752 KEVLG----LLENLFG---RNLVLNQINDINKL----INNF-----------------DS 783
Query: 755 SSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAV 814
LK +L + + +++ S Y D + +ER++
Sbjct: 784 YELKLYL-----------------------FNEFWLTYQSKIMELSVYGDGIIDNLERSI 820
Query: 815 LVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
++ D WR+HL M L AV R +G RNPL EY+ D F + R L + L
Sbjct: 821 ILINTDRIWREHLQKMTLLREAVGWRGYGQRNPLYEYRQDAFYMFETREELLRHLVIYDL 880
Query: 875 VQ 876
++
Sbjct: 881 LR 882
>gi|297623055|ref|YP_003704489.1| preprotein translocase subunit SecA [Truepera radiovictrix DSM
17093]
gi|297164235|gb|ADI13946.1| preprotein translocase, SecA subunit [Truepera radiovictrix DSM
17093]
Length = 984
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 306/719 (42%), Positives = 423/719 (58%), Gaps = 104/719 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH++VQ+IGGA LH G IAEMKT +VT NDYLA+ A
Sbjct: 78 LRHYNVQLIGGAALHYGKIAEMKTGEGKTLVATLALVLNAIPGKGAHLVTTNDYLARTGA 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+R LGLSVG+IQ + P+ RR+ Y CDITY NSELGFDYLRDN+A EQLV+
Sbjct: 138 EWMGPVYRALGLSVGVIQHDLRPDARRAAYACDITYMTNSELGFDYLRDNMAFRPEQLVL 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R P ++AI+DEVDS+LIDE R PL+ISG A +Y V AK+A L +G
Sbjct: 198 RADTPLNYAIIDEVDSILIDEARTPLIISGPAELATDKYYVMAKIAAQLERGEPAEGEDK 257
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
+T + K + LTE GIA AE AL +DL+ +N A + AL+A+ Y RD
Sbjct: 258 PATGDFTADEKTKDIHLTEAGIAKAEKALGVDDLFSSKNMELAHMLRQALRARVHYHRDK 317
Query: 206 QYIV-RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
QY+ G+ +I++E TGR+ RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ FKL
Sbjct: 318 QYVKDERGQIVIVDEFTGRLMPGRRFGEGLHQAIEAKEGVKIERENQTLATITYQNFFKL 377
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K++GMTGTAKTEEKEF +++ V+ +PTN P IR D + T +GK+E +E+E
Sbjct: 378 YNKIAGMTGTAKTEEKEFQEIYGADVLTIPTNRPVIRKDYDDIVYRTEKGKFEAVVREIE 437
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
+ + G+P+LVG+ +++ SE LS +L+++GI H VLNA K+ AREAE VAQAGR A+T
Sbjct: 438 EVHKTGQPILVGTVTIDASEKLSAMLRRRGIKHEVLNA--KHHAREAEIVAQAGRSGAVT 495
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGS 444
ISTNMAGRGTDI+LGGNP+ +A +++E ++R NVE
Sbjct: 496 ISTNMAGRGTDIVLGGNPEAIAGQLVE---RYGVSRYDENVE------------------ 534
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYP 504
L KA +L K V++++ + ++E++ L
Sbjct: 535 ----LCIKAVMLGK----------------------VDIARKL-VREIEGL--------- 558
Query: 505 LGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
P + L L+D E E V LGGLH+IGT HESRRIDNQLRGR+GRQGDP
Sbjct: 559 --PEDIIPTLERLRD-EAKADRE--RVVELGGLHIIGTERHESRRIDNQLRGRSGRQGDP 613
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
GS+RF VS +D++ + F+ + ++ R+ D+ PIE + + Q E F
Sbjct: 614 GSSRFYVSFEDDLMRLFA--NERVLGMMDRLGMDDTQPIEAKMVTSAIERAQKRVEDRNF 671
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDP 681
GIRK L+EFD V+ QR+ +Y R+ IL G + E I +Y+ A V + ++P
Sbjct: 672 GIRKQLLEFDNVMSKQREVIYKQRRDILLGNDISEDVQDMIAEYVDAQVQNYLNKELEP 730
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER ++++ +D W++ L M+ L + +R +G RNPL+EY + F M S
Sbjct: 789 MRELERYIVLQVVDNHWKEQLHAMDVLRQGIGLRGYGQRNPLQEYAFEAFNLFEEMKSGI 848
Query: 867 R 867
R
Sbjct: 849 R 849
>gi|315320547|ref|YP_004072604.1| preprotein translocase protein SecA [Thalassiosira oceanica
CCMP1005]
gi|315320602|ref|YP_004072659.1| preprotein translocase protein SecA [Thalassiosira oceanica
CCMP1005]
gi|283569020|gb|ADB27557.1| preprotein translocase protein SecA [Thalassiosira oceanica
CCMP1005]
gi|283569075|gb|ADB27612.1| preprotein translocase protein SecA [Thalassiosira oceanica
CCMP1005]
Length = 875
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 327/913 (35%), Positives = 483/913 (52%), Gaps = 149/913 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+ G I+EM+T +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNSGKISEMRTGEGKTLVATLPAYLNALTNRGVHIVTVNDYLASRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLGL GLIQ M ER++NY DITY N+E+ FDYLRDN+A N +Q+V+
Sbjct: 135 ISMGQIYRFLGLDTGLIQEDMSFLERQTNYNADITYVTNNEVAFDYLRDNMAPNLDQVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
PF++ IVDEVDS+ IDE + PL+IS + +Y VAA+VA+ L +H+ V+ K
Sbjct: 195 ---PPFNYCIVDEVDSIFIDEAQVPLIISQAVETCIDKYIVAAEVAQYLEVNVHFKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N ++ LTE+G E L+ DL++ NDPW ++++A+KA + R+V YIV+N + +I+
Sbjct: 252 NRNIILTEQGTTQIEKILQVEDLYNPNDPWIPYILSAIKATALFFRNVHYIVQNNQIIIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW+EG+HQAVEAKEG+ I+ ++ A ITYQ+ F LYPKLSGMTGTAKT
Sbjct: 312 DEFTGRIMPDRRWNEGLHQAVEAKEGVPIRQNTETAASITYQNFFLLYPKLSGMTGTAKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ +PV E+PT PN+R DLP + + KW +E +S+ + +P+L+G+
Sbjct: 372 SEVEFEKIYNLPVEEIPTARPNLRKDLPDFVYKDSLTKWTAIARECKSIAKTSQPILIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VENSE L+DLLK+ + + VLNA+P+ RE+E VAQAG +ITI+TNMAGRGTDII
Sbjct: 432 TTVENSEMLADLLKEYQLSYRVLNAKPENVKRESEIVAQAGEIGSITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-REALNVEVDDKTSSPKVLSEIK--LGSSSLALLAKAA 454
LGGN +K + + L+ + +N + S K LS + L + L+ A
Sbjct: 492 LGGNITFKVRKFLYNILVSCKNGQSTINYYEFCNSVSLKFLSVFRSLLHDQTFLNLSSTA 551
Query: 455 LLAKYVGKAEG---KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVAL 511
+L K++ + + YQ + F E + + N K K+
Sbjct: 552 IL-KFLNEIDQIRIPKIPYQCSIKFLLEELSRFEKKNQKVNNKI---------------- 594
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
VK LGGL++IGT + SRRIDNQLRGR GRQGDPG++RF +
Sbjct: 595 -------------------VKNLGGLYIIGTERNNSRRIDNQLRGRCGRQGDPGTSRFFL 635
Query: 572 SLQDEMFQKF------SFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
SL+D +F+ F +F S +D D+P+E + + + L Q E+ +
Sbjct: 636 SLEDSLFRNFGSSNLQNFMQSQLLD---------DLPLESNLLTKSLDAAQKRVEERDYD 686
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
RK L ++D++L QR VY R+ +L ++S + I Y + V+ +II + K P
Sbjct: 687 GRKYLFDYDDILNKQRNIVYYERRKLL--ESQSLRETILAYGEQVIKDII----NLAKDP 740
Query: 686 RYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
++ K I+++LF + I LNS+D+ +
Sbjct: 741 KFIQYIK--------TNSIIEELFKT-------RFINLTDSLNSLDV-------VELKTY 778
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
LF+ + IC L+R + I++ Y D+
Sbjct: 779 LFQEFWLSYETKVLEFEICQ------------VGLIRSFERTIILY----------YTDI 816
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
KE HL ++ L AV R++G RNPL E+K + F +
Sbjct: 817 AWKE----------------HLQKISLLRDAVGWRTYGQRNPLFEFKEEAYNLFQNRNMT 860
Query: 866 TRRLTVESLVQYW 878
R L + + +
Sbjct: 861 IRHLLIRDFLHSY 873
>gi|392373760|ref|YP_003205593.1| preprotein translocase subunit SecA [Candidatus Methylomirabilis
oxyfera]
gi|258591453|emb|CBE67754.1| Preprotein translocase secA subunit [Candidatus Methylomirabilis
oxyfera]
Length = 941
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/923 (35%), Positives = 483/923 (52%), Gaps = 175/923 (18%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEM T VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLLGGIVLHEGKIAEMATGEGKTLVATLPAYLNALEGKGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM ++RFLGL+VGLIQ M R+ Y D+TY N+E GFDYLRDN+ ++ +
Sbjct: 141 QWMGGIYRFLGLTVGLIQHDMDDAARKLAYGADVTYGTNNEYGFDYLRDNMKFSAAEFAQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R H+AIVDEVDS+LIDE R PL+ISG A + +Y ++ L QG
Sbjct: 201 R---ELHYAIVDEVDSILIDEARTPLIISGPAEESTEKYYQIDRIIPRLKQGATIVGGKM 257
Query: 151 ---------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
Y V+ K SV LTE G+A E L +L+D + + V ALKA
Sbjct: 258 YEAEAQVSGDYMVDEKAKSVALTESGVAKVESLLGITNLYDPAHMEFVHHVQQALKAHVL 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
++RDV Y+V++G+ +I++E TGR+ RRWS+G+HQAVEAKE +KI+ ++ +A IT+Q+
Sbjct: 318 FKRDVDYVVKDGEVIIVDEFTGRLMAGRRWSDGLHQAVEAKERVKIERENQTLATITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA TE EF +++ + V+ +PTN P +R + P + + K++
Sbjct: 378 YFRMYKKLAGMTGTADTEAAEFAQIYNLDVMVMPTNQPMVRANYPDVIYKSGPEKYDAVV 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
+E+ + + GRPVLVG+TS+E +E LS LLK++GIPH +LNA K+ REAE VAQAGR
Sbjct: 438 EEIAELHKTGRPVLVGTTSIEKNEKLSALLKRRGIPHQLLNA--KHHEREAEIVAQAGRF 495
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+TI+TNMAGRGTDI+LGG SPK L+
Sbjct: 496 KAVTIATNMAGRGTDILLGG--------------------------------SPKFLA-- 521
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQS 500
A LL + G+ E Q+ E +M Q L +L +++ +
Sbjct: 522 ------------AELLRR--GETEEDQIDPQKLAGTLEEVRQM-QHYGLLDLSVNVEEYA 566
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A ALT + K E E +V LGGLH+IGT HE+RRIDNQLRGRAGR
Sbjct: 567 A--------ALTVIR--KQTEA----EHQQVVALGGLHIIGTERHEARRIDNQLRGRAGR 612
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGS+RF +SL+D++ + F D ++ + ++ +E PIE + R + Q E
Sbjct: 613 QGDPGSSRFFLSLEDDLLRLFGSDRISSI--MEKLGMEEGEPIEHSMVTRAIETAQKRVE 670
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
+ F IRK L+E+D+V+ QRK +Y R+ I
Sbjct: 671 AHNFEIRKHLLEYDDVMNTQRKIIYAERRRI----------------------------- 701
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ G+ L D A + G E + EL S+ N +P+
Sbjct: 702 -------------------LDGEGLPDTLAEMRG-------EVIDELLSLYANAETYPEQ 735
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQES 800
L ++R+ W LT LLR L + ++ +Y +++
Sbjct: 736 WDLAGLTEAVKRQFDLEISWSPEEVASLT--------VALLRDSLEERVLRAYEE--RDA 785
Query: 801 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFI 860
++ + +ER V+++ +D W+DHL+ M+ L + +R +G ++PL EYK +G F
Sbjct: 786 KFGPELARYLERMVMLQVVDGQWKDHLLAMDHLKEGIGLRGYGQKDPLVEYKREGFAMFE 845
Query: 861 SMLSATRRLTVESLVQYWSSPME 883
+M+ ++ T+E L + +P E
Sbjct: 846 AMIDRIKQQTIEYLYRVQVAPAE 868
>gi|260892370|ref|YP_003238467.1| preprotein translocase subunit SecA [Ammonifex degensii KC4]
gi|260864511|gb|ACX51617.1| preprotein translocase, SecA subunit [Ammonifex degensii KC4]
Length = 888
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 301/717 (41%), Positives = 414/717 (57%), Gaps = 105/717 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 79 MRHFDVQLMGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGLSVG+I G+ ER+ Y+ DI Y N+E GFDYLRDNLA + +LV
Sbjct: 139 EWMGQIYRFLGLSVGVIVHGLSTAERKKAYQSDIVYGTNNEFGFDYLRDNLAVDPSELVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISG ++K Y A++A L+ G YTV+ K
Sbjct: 199 R---ELYYAIIDEVDSILIDEARTPLIISGPSAKPTDLYYTFARIAPRLIPGEDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V +TE G+A E L+ ++L DE N + ALKA +RD Y+V++G+ +I
Sbjct: 256 TRTVAVTESGVAKVEKWLKIDNLCDERNLELMHHLQQALKAHALMKRDRDYVVKDGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLKI+ +S +A IT Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMYGRRYSDGLHQAIEAKEGLKIERESQTLATITLQNYFRMYEKLAGMTGTAA 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ M V+ +PT+ P IR DLP F T K+ +E+ G+PVLVG
Sbjct: 376 TEEEEFRKIYGMDVVVIPTHKPMIRQDLPDVVFKTEEAKFRAVVEEIARRHAKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +L+++GIPHNVLNA K+ REAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEILSRMLQKRGIPHNVLNA--KHHEREAEIVAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
+LGGNP LAK+ E+ + P+ L+
Sbjct: 494 LLGGNPVFLAKE-----------------EMRRRGYPPE-------------------LI 517
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSV 516
A K+ EA+ F E +E + +E +K+ VAL L +
Sbjct: 518 AAATEYGPPKTPEEAEARRVFKEILEEKTRITEEERKKV-------------VALGGLHI 564
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
IGT HESRRIDNQLRGR GRQGDPGST+F +SL+D+
Sbjct: 565 -----------------------IGTERHESRRIDNQLRGRCGRQGDPGSTQFFLSLEDD 601
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ + F +T +L +R+ DED PIE + R + Q E+ F +RK ++E+D+V
Sbjct: 602 LLRLFGGET--IANLATRLGIDEDTPIEHPLLTRAIESAQKRVEQRNFSLRKHVLEYDDV 659
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
L QR+ +Y R+ +L G E+ + I ++ VV + HP W L+ L
Sbjct: 660 LNQQREIIYAQRRRVLLG--ENLREVIKGMIEEVVARAVATYCPEGVHPEEWDLNGL 714
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 779 NLLRKYLGDILIASYLNVVQ--ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
L R+ L D+L + L + E+ M+E+ER +L++ +D W DHL M+RL
Sbjct: 734 GLRREALQDLLTSRALEFYERREAELGPETMRELERLLLLRLVDEKWMDHLDAMDRLREG 793
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+ +R++G R+PL EYK++ + F +M++A + TV L + +P
Sbjct: 794 IGLRAYGQRDPLVEYKLESYQMFQNMIAAIQEDTVRYLFRLKVAP 838
>gi|11465526|ref|NP_045083.1| preprotein translocase subunit SecA [Cyanidium caldarium]
gi|3122839|sp|O19911.1|SECA_CYACA RecName: Full=Protein translocase subunit SecA
gi|2465749|gb|AAB82678.1| unknown [Cyanidium caldarium]
Length = 895
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 297/735 (40%), Positives = 430/735 (58%), Gaps = 65/735 (8%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+DVQ+IGG VLH+G IAEMKT ++TVNDYLA+RD E +
Sbjct: 87 YDVQMIGGIVLHEGKIAEMKTGEGKSLAASFPAYLNALTEKGVHIITVNDYLARRDYESI 146
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLG+ VGLI + +R++NY DITY NSE+GFDYLRDN+A ++L R
Sbjct: 147 GKIFEFLGMKVGLINQYTPISKRKNNYLADITYVTNSEIGFDYLRDNMATQIKELTQR-- 204
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
PFHF I+DEVDS+LIDE R PL+ISG +Y +A ++A L + +HY ++ KN +
Sbjct: 205 -PFHFCIIDEVDSILIDESRTPLIISGRTKTRKDKYELAHRLANFLKKSIHYKIDEKNRT 263
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINEL 220
+ L++ G+ E L+ ++ + WA F+ NALKAKE Y ++V YIVR+ +A+I++E
Sbjct: 264 IILSDLGVITCEKILKIKSIYSAQNTWAHFIYNALKAKELYLKNVHYIVRDQQAIIVDEF 323
Query: 221 TGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEK 280
TGR+ +RRW++G+HQ++EAKE L+I+ ++ +A ITYQ+LF LY K+SGMTGTAKTEE
Sbjct: 324 TGRIMPERRWADGLHQSIEAKENLQIKEETKTLASITYQNLFLLYLKISGMTGTAKTEEN 383
Query: 281 EFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSV 340
E + ++ +PVI +PT IR DLP F T K + +E M LGRP+LVG+T++
Sbjct: 384 ELISIYSLPVICIPTYKSMIRKDLPDLIFQTEIEKLKAVTEECVKMHLLGRPILVGTTNI 443
Query: 341 ENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGG 400
+ SE LS LL Q I HN+LNA+P+ RE+E +AQAGRKYA+TISTNMAGRGTDIILGG
Sbjct: 444 QKSEILSQLLNQYQIRHNLLNAKPQNVKRESEIIAQAGRKYAVTISTNMAGRGTDIILGG 503
Query: 401 NPKMLAKKIIEDRLL-LLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKY 459
N + + K I ++LT + +D S +EI+ +S++ +
Sbjct: 504 NLEYIIKNKITSLFKPIILTGNTQYIIIDKSLKSSG--NEIRDINSNILKIINLHRQNPK 561
Query: 460 VGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKD 519
+ AE F S+ ++ S +K + I ++Y + + Y +
Sbjct: 562 LTIAE------------FGNSLNIA-SKKIKSNNEYILNLRSIYIIFENIYKKYFDI--- 605
Query: 520 CEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQ 579
E EVK +GGL VIGT HESRRIDNQLRGR+GRQGD GS+ F +SL+D + +
Sbjct: 606 -------ESKEVKNIGGLCVIGTERHESRRIDNQLRGRSGRQGDVGSSIFFISLEDNLLR 658
Query: 580 KFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEV 639
F + ++ + PI+ + R L Q E ++ RK L ++D++L
Sbjct: 659 IFGGER--ISKMMHTFMPSVNEPIQSPLLSRSLDSAQKKVESLHYNFRKQLFQYDQILNS 716
Query: 640 QRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGN-VDPLKHPRYWSLDKLLKEFI 698
QRK +Y R+ IL +NE + + YM+ + +I+ + + PR DK+LK
Sbjct: 717 QRKAIYLERRLILE-SNEIVAWTM-AYMELTIIDILNDQYLYSHRKPR----DKVLKNI- 769
Query: 699 AIAGKILDDLFAGIS 713
KI D L + IS
Sbjct: 770 ---NKIYDLLASPIS 781
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
MK +ER+++++ +D W +H+ M+ L + R + ++PL EYK + FI M+
Sbjct: 818 MKSLERSLILEQIDTNWSEHIQQMSFLKEFIGWRGYAQKDPLIEYKNESYILFIKMIRTI 877
Query: 867 RR 868
R+
Sbjct: 878 RQ 879
>gi|452820072|gb|EME27120.1| preprotein translocase subunit A [Galdieria sulphuraria]
Length = 927
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 327/907 (36%), Positives = 482/907 (53%), Gaps = 119/907 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT------------------------VVTVNDYLAQRD 36
+R +DVQ++G VL G+IAEM T ++TVNDYLA+RD
Sbjct: 102 IRLYDVQLLGSLVLLKGNIAEMATGEGKTYVTIPAAYFEALHRKGGIFIITVNDYLARRD 161
Query: 37 AEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLV 96
A ++ V+ FL +S+G++ EE++ Y +I Y NSELGFDYLRD+L + + +V
Sbjct: 162 AHLVKPVYDFLSISLGIVDSSTPFEEKKMAYSQEIVYVTNSELGFDYLRDHLTTSPDGVV 221
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
+ F+FAIVDEVD+VLIDE R PL+IS + Y A V L L Y V+
Sbjct: 222 L--SSSFYFAIVDEVDAVLIDEARTPLIISDKVKAPKEFYDKAIDVIGQLQPLLDYEVKE 279
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K +V LTE G+ E LET+DL+ PWA +++NALKAKE + RD YIV G+ I
Sbjct: 280 KEQTVILTERGMIKCETLLETDDLYSLETPWAYYLVNALKAKELFLRDRDYIVDQGQVKI 339
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I+ TGR RRW+EG+HQ+VEAKEGL+I ++ A+I+YQS FKL+ KL GMTGTA
Sbjct: 340 IDTFTGRTLIGRRWNEGLHQSVEAKEGLEISEETQAAAKISYQSFFKLFHKLCGMTGTAS 399
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
T++ EF ++ M VI +PT P IR D P F T K + +E+ESM+ LGRP+LVG
Sbjct: 400 TDKNEFQLIYNMEVITIPTAFPMIRKDYPDWVFQTKAFKLQAIIEEIESMYSLGRPILVG 459
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS++ SE +S LL+ + IPH VLNARP+ A+REAE V+QAG +A+TISTNM+GRGTDI
Sbjct: 460 TTSIDASEEMSTLLRDRNIPHEVLNARPENASREAEIVSQAGTLFAVTISTNMSGRGTDI 519
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
+LGGNP + + I++ LL + L + K + P+ + L
Sbjct: 520 MLGGNPVHMTRSCIKELLLEYIRSGNLERQSHIKWNIPRDFIQS---------------L 564
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYP--LGPTVA---L 511
A+Y K+ T E+K S+ + + ++ +L L AM P L P +
Sbjct: 565 AEY-----WKTTTSHESKE-CSDDMLLHSKTSIDDLLYLF--HPAMEPSTLDPHILDLWQ 616
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
+L + + + +++ +LGGL VIGT HESRRIDNQLRGRAGRQGDPG+TRF +
Sbjct: 617 PFLDIFQQIRRDVEEQRNKIIQLGGLFVIGTERHESRRIDNQLRGRAGRQGDPGATRFFL 676
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D +F+ F D + R+ N +PIE + L +Q + E+Y+ +R L
Sbjct: 677 SLEDRLFRIFGGDRIKGLMQSLRVGN---LPIENSLVTSSLDNIQSTVEQYFARMRMELF 733
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD 691
++D+V+ R +Y R IL G+ E Q++ + M ++EII +W L+
Sbjct: 734 KYDQVVAKHRIAIYTERDRILRGSMEYLMQRLEKDMYQTMEEII---------KVHWPLN 784
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
+ +T LK ++L E +FP L
Sbjct: 785 R---------------------PETELKCQQKLKE---------FFPFL----------- 803
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLR-KYLGDILIASYLNVVQESRYDDVYMKEV 810
LK W I S L + + L +L DI + ++ Y + +
Sbjct: 804 ----QLKNWKTIQSVTLLEECIEKLQNVLFHFNWLEDIPLF-------QTSPKSSYAETI 852
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
R + ++ LD W DHL ++ + + ++ + +P EY+ F +++ RR +
Sbjct: 853 LRFIYLQQLDHLWMDHLKRLDFIFQVIGLQVYRQTDPFLEYQRQAYDRFQELVANMRRTS 912
Query: 871 VESLVQY 877
+ S+ Y
Sbjct: 913 IYSVTHY 919
>gi|456062047|ref|YP_007476292.1| preprotein-translocase subunit a (chloroplast) [Pavlova lutheri]
gi|449327234|gb|AGE93790.1| preprotein-translocase subunit a (chloroplast) [Pavlova lutheri]
Length = 893
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 292/705 (41%), Positives = 413/705 (58%), Gaps = 62/705 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG +LHD IAEMKT +VTVN+YLA+RD+
Sbjct: 77 LRHYDVQLIGGCILHDSKIAEMKTGEGKTLVAILPAYLNALSGKSVHIVTVNEYLAKRDS 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ RV FLGLSVGLI M EER+ NY+CD+ YT NSELGFDYLRDNL N + V
Sbjct: 137 LSVGRVLSFLGLSVGLILADMNREERQENYKCDVIYTTNSELGFDYLRDNLVGNPSEKVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F FAI+DEVDSVLIDE R PL+IS Y A VA+ HY ++ +
Sbjct: 197 ---NGFEFAIIDEVDSVLIDEARTPLIISRSLETLNNIYLTAKNVAQAFEINTHYEIDKR 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V L E G LAE L + ++ +PWA +++NA+KAKEFY +D Y+V + I+
Sbjct: 254 NRNVYLNESGSKLAEKLLGVSSIYKFEEPWALYILNAIKAKEFYTKDKDYLVMRNQITIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RRW +G+HQA+EAKEG+ + ++++ +A ITYQ+ F Y KLSGMTGTA T
Sbjct: 314 DEFTGRILKGRRWGDGLHQAIEAKEGVTVGSETMTMASITYQNFFLFYKKLSGMTGTALT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E KEF K++ + V VPTN R+D + + KW+ E S+ GRP+L+G+
Sbjct: 374 EAKEFKKIYNLSVDCVPTNKKVNRIDKEDVVYKSLYAKWKAVLYESLSIHEQGRPLLIGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
++V+NSE +S LLK+ I H++LNA+P+ AA E+E +AQAGRK ++TI+TNMAGRGTDI+
Sbjct: 434 SNVKNSEIVSGLLKEYNIKHSLLNAKPENAANESEIIAQAGRKGSVTIATNMAGRGTDIL 493
Query: 398 LGGNPKMLAKKIIEDRLL---LLLTREALNVEVDDKTSSPK---VLSEI-KLGSSSLALL 450
LGGNP L K E R + ++L+ + + V ++ ++ K V+SE +L L
Sbjct: 494 LGGNPDFLTKG--ELRYIFRSIVLSLDDMTVPKNELINNLKYKYVISEKNRLDVEELIDK 551
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVA 510
K+A E +E ES + + +QKL +K Y
Sbjct: 552 LKSAYTV-----PEKNRIGVEELIENIDESFQPVDKFEIL-IQKLYEKTKERYVR----- 600
Query: 511 LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM 570
C E EV +LGGLH+IGT H+SRRIDNQLRGRAGRQGDPGS++F
Sbjct: 601 ------------ECLAEKEEVIQLGGLHIIGTEKHDSRRIDNQLRGRAGRQGDPGSSKFF 648
Query: 571 VSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
+S +D + + F+ T ++I + ++D P+EG + + Q E + +RK L
Sbjct: 649 LSFEDRLIEIFT--TGGLKNMIKELDLEDDQPVEGKIVSLSIESAQKRIEDKNYQVRKQL 706
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+D VL +QRK +YD R L+ + I QY++ +VD+++
Sbjct: 707 FNYDNVLNLQRKVIYDERDRFLSLTD--FKGLILQYLEKLVDDVV 749
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ +E A L++++D W++ L M L ++ R++G R+PL EY+ + R F
Sbjct: 820 QSLEYAFLLQSIDQVWKEQLTRMELLKESIGWRAYGQRDPLLEYQKEAYRIF 871
>gi|253701295|ref|YP_003022484.1| preprotein translocase subunit SecA [Geobacter sp. M21]
gi|259509941|sp|C6E178.1|SECA_GEOSM RecName: Full=Protein translocase subunit SecA
gi|251776145|gb|ACT18726.1| preprotein translocase, SecA subunit [Geobacter sp. M21]
Length = 957
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 307/749 (40%), Positives = 427/749 (57%), Gaps = 86/749 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHSGKIAEMKTGEGKTLVATLPSYLNGISGRGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R+H+FLGLSVG+I G+ ERR Y DITY N+E GFDYLRDN+ + + V
Sbjct: 141 DWMGRIHKFLGLSVGVIVHGLEDYERREAYAADITYGTNNEFGFDYLRDNMKFDLSEYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R PF+FA+VDEVDS+LIDE R PL+ISG +Y + ++ LL +G
Sbjct: 201 R---PFNFAVVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPLLKKGEVIEVEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+TV+ K S LTEEG+ E L+ +L+D N AL+A
Sbjct: 258 TLSGKRKTYTGDFTVDEKAKSASLTEEGVLKVEKLLKIENLYDPRNMEILHHTQQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
++RDV Y+VR+ + LI++E TGR+ RRWS+G+HQA+EAKEG KI+ ++ +A IT+
Sbjct: 318 ALFKRDVDYVVRDNEVLIVDEFTGRLMPGRRWSDGLHQAIEAKEGAKIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE +EF K++++ V+ +PTN P +R D P + T R K+
Sbjct: 378 QNYFRMYEKLSGMTGTADTEAEEFHKIYKLDVVVIPTNRPLLRPDFPDVIYKTEREKFNA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
E++ + G+P+LVG+ S+E SE LS+LLK+QGIPH VLNA K +EAE VAQAG
Sbjct: 438 VIGEIKELHEKGQPILVGTISIEKSEELSELLKRQGIPHFVLNA--KQHEKEAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLS 438
RK +TI+TNMAGRGTDI+LGGNP LA R+ N +P+ +
Sbjct: 496 RKGMVTIATNMAGRGTDIVLGGNPDGLA-------------RQEFN-------GTPETRT 535
Query: 439 EIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDK 498
E + ++ + L+K + + E + Y + ++ ++L+EL++ +
Sbjct: 536 E-EFMAAFIETLSKDLPEKELLQSLERE---YPGIMPVVAACLKQGGEIDLEELERQV-- 589
Query: 499 QSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRA 558
L L V K+ V C+ E EV LGGLH++GT HESRRIDNQLRGR+
Sbjct: 590 ------LAEHQKQFNLLVDKNKPV-CAAEHDEVVALGGLHILGTERHESRRIDNQLRGRS 642
Query: 559 GRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLI-SRITNDEDMPIEGDAIVRQLLGLQI 617
GRQGDPGS+RF +SLQD++ + F S V +I ++ +E I I R + Q
Sbjct: 643 GRQGDPGSSRFYLSLQDDLLRIFG---SERVSMIMDKLGIEEGEAITHGLITRAIENAQK 699
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E + F IRK L+E+D+V+ QR+ +Y R+ IL G NE + M+ V +I+
Sbjct: 700 KVEAHNFEIRKHLIEYDDVMNKQREVIYTQRKEIL-GGNE-IRESFTGMMEEAVGDIVAA 757
Query: 678 NVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
V R W + + G LD
Sbjct: 758 YVIDRTPAREWDWQGITDTVQKVFGFHLD 786
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ + D M + + ++++ +D W+DHL++++ L + +R +G ++P +EYK + + F
Sbjct: 817 TEFGDDLMDHLIKVIMLQVIDAQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKREAYKLF 876
Query: 860 ISMLSATRRLTVESLVQYW 878
+ M+ R VE + +W
Sbjct: 877 MDMMLRIREEVVEKI--FW 893
>gi|269101084|ref|YP_003289232.1| Preprotein translocase subunit secA [Ectocarpus siliculosus]
gi|266631592|emb|CAV31263.1| Preprotein translocase subunit secA [Ectocarpus siliculosus]
gi|270118722|emb|CAT18802.1| Preprotein translocase subunit secA [Ectocarpus siliculosus]
Length = 876
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 320/881 (36%), Positives = 474/881 (53%), Gaps = 141/881 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+D+Q+IGG VL+DG IAEMKT +VT+NDYLA+RDA
Sbjct: 76 LRHYDIQLIGGLVLNDGKIAEMKTGEGKTLVSTSPALVNALSGKGVHIVTINDYLAKRDA 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HR LGL VGLIQ GM + R+ NY D+TY N +L FD+L+DN+ + ++LV
Sbjct: 136 EWMGQIHRLLGLKVGLIQDGMQSQSRQINYSRDLTYVTNVDLVFDFLKDNMVTDKKELVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
KPF+F I+DEVDS+LIDE R PL+IS E++ V ++ A + ++ L H+ ++ K
Sbjct: 196 ---KPFNFCIIDEVDSILIDEARTPLIISRESNLLVEKFFKANEASKYLENKKHFEIDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LTE+G+ A++ L DL+ DPW +++N+LKA+ + RD+ YI++N + +II
Sbjct: 253 AKKISLTEQGLDRAKILLNVEDLYSIQDPWIPYILNSLKARHLFFRDIHYILKNNEVVII 312
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E R+W +G+HQA+EAKE L++ S +A ITYQ+ F+LYPK+SGMTGTAKT
Sbjct: 313 DEFTGRIMEGRKWGDGLHQAIEAKENLQMLKGSETLASITYQNFFRLYPKISGMTGTAKT 372
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF ++ + V +PT R D F KW QE ++ GRPVLVG+
Sbjct: 373 EELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGT 432
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+++NSE +S LLK +PH +LNA+P+ RE++ VAQAG +ITI+TNMAGRGTDI+
Sbjct: 433 TTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDIL 492
Query: 398 LGGNPKMLAKKIIEDRLLL--LLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAAL 455
LGGNP+ K + R +L L+ +E V P + + I+L + L K
Sbjct: 493 LGGNPEF--KALSSTRFILKKLIQKEDFFV--------PGI-NLIRLKKA----LKKNPN 537
Query: 456 LAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLS 515
L Y+ K T E + + +NL L+ I+ Y
Sbjct: 538 LIPYLQKNLDILLTVFEISN---------KKLNL--LENFINN-------------LYSQ 573
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L + E VK LGGL+VIGT HESRRIDNQLRGRAGRQG+PGS+RF +SL D
Sbjct: 574 LLLKYKERQKEESKLVKSLGGLYVIGTERHESRRIDNQLRGRAGRQGNPGSSRFFLSLND 633
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
+ + F D D++ ++ + ++ ++ + L Q E +Y+ RK+L ++D+
Sbjct: 634 PLIRVFGGDK--IQDMMQKLKIESEI-LDSKFLSDSLNSSQQKVEGFYYDQRKTLNKYDQ 690
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
VL+ QRK +Y LR+ +L+ + M+ +V E G
Sbjct: 691 VLDKQRKVIYYLREKVLST----------KVMRDLVMEFSEG------------------ 722
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
LDD ++ +D N ++ P +F+ + R S
Sbjct: 723 --------FLDDF------------------IDYLDSQNQEGKEIILPKKIFKLLNRLSI 756
Query: 756 SLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRY----DDVYMKEVE 811
S I D+L K G L+K+L L ASY +E RY D +
Sbjct: 757 S----NGILYDNLDKLGA-------LKKFLYQQLWASY--ACKEFRYSCSTDSRVLDRYN 803
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
+ + K +D +W HL NM L A + ++ ++P +Y+
Sbjct: 804 QLIFFKYIDFYWYKHLENMTFLLDATSWEAYAQKDPFLQYE 844
>gi|11467483|ref|NP_043629.1| preprotein translocase subunit SecA [Odontella sinensis]
gi|1351056|sp|P49649.1|SECA_ODOSI RecName: Full=Protein translocase subunit SecA
gi|1185178|emb|CAA91661.1| preprotein-translocase subunit A [Odontella sinensis]
Length = 888
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 286/702 (40%), Positives = 420/702 (59%), Gaps = 59/702 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL+ G IAEM+T +VTVN+YLA RD
Sbjct: 75 LRHFDVQLIGGLVLNGGKIAEMRTGEGKTLVATLPAYLNALTKKGVHIVTVNEYLASRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLGL GLIQ M ER+ NY+ DITY N+ELGFDYLRDNLA N + +
Sbjct: 135 TSMGQIYRFLGLETGLIQEKMTTPERQRNYKADITYVTNNELGFDYLRDNLALNIRDVFL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ IVDEVDSVLIDE PL+I+ V +Y +A+++ + L +H+ ++ K
Sbjct: 195 R---PFNYCIVDEVDSVLIDEALTPLIIANSVKTCVDKYIIASEITDYLELNVHFEIDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N SV LT +G E L DL++ DPW +V+NA++A + RDV YIV+N + +I+
Sbjct: 252 NKSVLLTNQGTIQIEKILGVQDLYNPRDPWIPYVINAIRASSLFFRDVHYIVQNNRIVIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW G+HQAVEAKE + I+ + + A ITYQ+ F +YPKLSGMTGTAKT
Sbjct: 312 DEFTGRIMPDRRWRHGLHQAVEAKENVAIRQTTEITASITYQNFFLVYPKLSGMTGTAKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ +PV E+PT PN+R DLP + KW +E +++ + +P+L+G+
Sbjct: 372 AEVEFDKIYSLPVEEIPTARPNLRQDLPDLIYKDEFSKWNAIAKECQNISLVKQPILIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VE SE L+ LL++ + H +LNA+P+ RE+E VAQAG+K +ITI+TNMAGRGTDII
Sbjct: 432 TTVEKSEMLAQLLQEYRLSHQILNAKPENVRRESEIVAQAGKKGSITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI-KLGSSSLALLAKAALL 456
LGGN + +K + + +L+ + + D + S ++ + KL +S L L
Sbjct: 492 LGGNIQFKVRKDLYN-ILVTYKYQTKENKKDSLSRSLQIFPLLKKLQRTSQKFLTVLNCL 550
Query: 457 AKYVGKAEGKSWTYQEAKSFFSES-VEMSQSMNLKELQKL--IDKQSAMYPLGPTVALTY 513
K F + S VE+ + +N EL ++ I Q +M L
Sbjct: 551 IN--------------NKQFLNLSDVEVLKILNESELIRVPKISYQCSMKFL-------- 588
Query: 514 LSVLKDCEVHCSN-EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
++ L + E + VK LGGL++IGT ++S+RIDNQLRGR GRQGDPG +RF +S
Sbjct: 589 INELVNFEKKTQKLDNVIVKNLGGLYIIGTERNDSQRIDNQLRGRCGRQGDPGKSRFFLS 648
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
++D++ + F D L S++ +D+P+E + + + L Q E+ + +RK+L +
Sbjct: 649 VEDKLIRLFG-DARLENVLKSQLL--DDLPLESELVTKILDSAQKRVEERNYELRKNLFD 705
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
+D++L QR VY R+ +L +ES +I Y + V+ EI
Sbjct: 706 YDDILNKQRNVVYYERRKVL--ESESARIKILAYGEQVISEI 745
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E ER +++ +D W++HL M+ L AV R +G RNPL EYK D + F T
Sbjct: 815 IQEFERTLILIYMDREWKEHLQKMSLLRDAVGWRKYGQRNPLSEYKEDAYKLFKYRGIVT 874
Query: 867 RRLTVESLVQ 876
R L + L++
Sbjct: 875 RHLVIYELLR 884
>gi|219110735|ref|XP_002177119.1| nuclear-encoded-like protein of plastid sec [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217411654|gb|EEC51582.1| nuclear-encoded-like protein of plastid sec [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 935
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 322/845 (38%), Positives = 468/845 (55%), Gaps = 80/845 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQI+GG +LHDG +AEM T V+TVNDYLA+RD
Sbjct: 85 LRHYDVQIMGGFILHDGRLAEMATGEGKTLVSTLPTYVNALTGKASFVITVNDYLARRDM 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +VHRFLGL+VGLIQ GM E+R+ Y CD+ Y NSELGFDYLRD+LA + +Q V+
Sbjct: 145 EKMGQVHRFLGLTVGLIQSGMTEEQRQKAYACDVVYVTNSELGFDYLRDHLALSPKQTVL 204
Query: 98 -RWPKPFH-FAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVE 155
F F +VDE DSVLIDE R PL+IS + +Y A ++A L G+HY V+
Sbjct: 205 PGGAGEFDGFCVVDEADSVLIDEARTPLIISKQVPAPANKYATANQLAGALKTGIHYEVD 264
Query: 156 LKNNSVELTEEGIALAEMALETNDLWD---ENDPWARFVMNALKAKEFYRRDVQYIV--- 209
LKN +V +TE+G +E AL + L+ + + WA FV NA+KAKE + +DV+Y +
Sbjct: 265 LKNKNVVMTEQGYRESERALGVDSLFSIDGKGEAWAPFVANAVKAKELFEKDVEYTILKD 324
Query: 210 RNGKAL---IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
+GK+ II+ TGRV + RRWS+G+HQ++EA EG+ + S V+A++TYQ+LF+ +
Sbjct: 325 SSGKSTGVGIIDAFTGRVLDGRRWSDGLHQSIEAMEGIDVSEQSKVIAKVTYQALFRQFT 384
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+LSGMTGTA + E + + + V VPT LP R D F T R +EV ++
Sbjct: 385 RLSGMTGTAMADASELEQTYGLMVTPVPTALPVARRDYADVVFKTRRAADRNLIKEVVNV 444
Query: 327 FR---LGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
LGRP L+G+TSV SE L + L ++GI +LNA PK A RE+E VAQAGR +
Sbjct: 445 GGGEPLGRPCLIGTTSVAQSEILVEALVKEGIKAELLNASPKNAPRESEIVAQAGRSGVV 504
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSE---- 439
T++TNMAGRGTDI+LGG P +A+ I+ R +LL R L+ E +K P SE
Sbjct: 505 TVATNMAGRGTDILLGGCPTTMAR--IKTR-SILLDRGVLSAE--EKAGVPPSPSENYFP 559
Query: 440 IKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSM-NLKELQKLIDK 498
+ L +L AA K KA G T E + + + +++ +L + KL D
Sbjct: 560 APIDEDVLTMLNDAAASLK---KAMGIELTGIELDEILTVAFDTTEAEDDLDYIVKLRDA 616
Query: 499 QSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRA 558
+A V Y VL + E VK+ GGL+V+GT+ HES RID QLRGR+
Sbjct: 617 AAA-------VKAVYEPVL-------AEEKEAVKKAGGLYVMGTNRHESSRIDQQLRGRS 662
Query: 559 GRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQIS 618
GRQGDPGS+RF +S +D+MF F D + + R++ EDMP+E + L +Q
Sbjct: 663 GRQGDPGSSRFFLSFEDDMFVIFGGDQLNRMLEMFRVS--EDMPVEAQQVTDALDKVQKQ 720
Query: 619 AEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGN 678
E+ Y IR+ + FD+VL QRK +Y R+ +L A E + + Y + + +I+
Sbjct: 721 VEEKYRDIRREIFNFDDVLNSQRKVIYSRRRGVLFSAPEDSLKMMKTYNEKTIQDIVKAQ 780
Query: 679 VDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFP 738
D + + + + +F +A ++ GD K+ + +L ++ + +
Sbjct: 781 TDEAGSVKVDKVLEKIAQFFPLAQPLV------TVGDLSGKNQNAVADLLNVAVEEVFSA 834
Query: 739 DLPKPPNLFRGIRRKSSSLKR---WLAICSDDLTKNGRYRATTNL-----LRKYLGDILI 790
+ + L + +SL R ++A+ + D + +A NL LR+Y G +
Sbjct: 835 KIKEMDALAKSAGNAPNSLGRSANYIALVTMDNAWSDHLQAMENLKESVILRQYQGRDPV 894
Query: 791 ASYLN 795
A Y N
Sbjct: 895 AEYQN 899
>gi|197117913|ref|YP_002138340.1| preprotein translocase subunit SecA [Geobacter bemidjiensis Bem]
gi|226732203|sp|B5E808.1|SECA_GEOBB RecName: Full=Protein translocase subunit SecA
gi|197087273|gb|ACH38544.1| preprotein translocase, SecA subunit [Geobacter bemidjiensis Bem]
Length = 958
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 302/749 (40%), Positives = 426/749 (56%), Gaps = 86/749 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHSGKIAEMKTGEGKTLVATLPSYLNGISGKGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R+H+FLGLSVG+I G+ ERR Y DITY N+E GFDYLRDN+ + ++ V
Sbjct: 141 DWMGRIHKFLGLSVGVIVHGLEDHERREAYAADITYGTNNEFGFDYLRDNMKFDLDEYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R PF+FA+VDEVDS+LIDE R PL+ISG +Y + ++ LL +G
Sbjct: 201 R---PFNFAVVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPLLKRGEVIEVEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+TV+ K S LTEEG+ E L+ +L+D N AL+A
Sbjct: 258 TLSGKRKTYTGDFTVDEKAKSATLTEEGVLKVEKLLKIENLYDPRNMEVLHHTQQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
++RDV Y+VR+ + +I++E TGR+ RRWS+G+HQA+EAKEG KI+ ++ +A IT+
Sbjct: 318 ALFKRDVDYVVRDNEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGAKIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y +LSGMTGTA TE +EF K++++ V+ +PTN P +R D P + T R K+
Sbjct: 378 QNYFRMYERLSGMTGTADTEAEEFHKIYKLDVVVIPTNRPLLRPDFPDVIYKTEREKFNA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
E++ + G+P+LVG+ S+E SE LS+LLK+Q IPH VLNA K +EAE VAQAG
Sbjct: 438 VIGEIKELHEKGQPILVGTISIEKSEELSELLKRQSIPHFVLNA--KQHEKEAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLS 438
RK +TI+TNMAGRGTDI+LGGNP LA++ + +P+ +
Sbjct: 496 RKGMVTIATNMAGRGTDILLGGNPDGLARQ--------------------EFKGTPEART 535
Query: 439 EIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDK 498
E + ++ + L+K + + E + Y + ++ ++L+EL++ +
Sbjct: 536 E-EFMAAFMETLSKDLPEKELLQSLERE---YPGIMPVVASCLKQEGEIDLEELEQQV-- 589
Query: 499 QSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRA 558
L L V K+ V C+ E EV LGGLH++GT HESRRIDNQLRGR+
Sbjct: 590 ------LAEHQKQFNLLVEKNKPV-CAVEHDEVVALGGLHILGTERHESRRIDNQLRGRS 642
Query: 559 GRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLI-SRITNDEDMPIEGDAIVRQLLGLQI 617
GRQGDPGS+RF +SLQD++ + F S V +I ++ +E I I R + Q
Sbjct: 643 GRQGDPGSSRFYLSLQDDLLRIFG---SERVSMIMDKLGIEEGEAITHGLITRAIENAQK 699
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E + F IRK L+E+D+V+ QR+ +Y R+ IL G NE M+ V +I+
Sbjct: 700 KVEAHNFEIRKHLIEYDDVMNKQREVIYTQRKEILAG-NE-IRDSFTGMMEETVGDIVSA 757
Query: 678 NVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
V R W + + G LD
Sbjct: 758 YVIDRTPAREWDWQGITDSVQKVFGFHLD 786
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ + D M + + ++++ +D W+DHL++++ L + +R +G ++P +EYK + + F
Sbjct: 817 TEFGDDLMDHLIKVIMLQVIDAQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKREAYKLF 876
Query: 860 ISMLSATRRLTVESLVQYW 878
+ M+ R VE + +W
Sbjct: 877 MDMMLRIREEVVEKI--FW 893
>gi|378824590|ref|YP_005089760.1| secA gene product (chloroplast) [Synedra acus]
gi|371572789|gb|AEX37885.1| preprotein translocase subunit SecA (chloroplast) [Synedra acus]
Length = 913
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 313/894 (35%), Positives = 471/894 (52%), Gaps = 119/894 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG VL+ IAEMKT +VTVNDYLA RD
Sbjct: 83 LRHFDVQLMGGLVLNSNKIAEMKTGEGKTLVATLPASLNALTKKGVHIVTVNDYLANRDQ 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++RFLG GLIQ GM ER+ NY+ DITY N EL FDYLRDN N + +V+
Sbjct: 143 VSMGQIYRFLGFDTGLIQAGMSQTERKENYQSDITYVTNYELTFDYLRDNTTLNRKDIVL 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKD--VARYPVAAKVAELLVQGLHYTVE 155
F++ I+DEVDS+LIDE + P++++ + SKD V ++ +A+++ L HY V+
Sbjct: 203 ---PAFNYCIIDEVDSILIDEAQTPIILA-DTSKDTSVEKFIIASEITNYLEFNKHYIVD 258
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
KN +V LTE G E ++T DL++ DPW +++NALKA + ++ YI++ + +
Sbjct: 259 EKNKNVTLTELGSQQVEKIIQTQDLYNPRDPWIPYIINALKANSLFFNNIHYIIQANRIV 318
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RRW +G+HQA+EAKE L I+ + A ITYQ+ F +YPKLSGMTGT
Sbjct: 319 IVDEFTGRIMPDRRWGDGLHQAIEAKEKLAIRPRTETQASITYQNFFLMYPKLSGMTGTG 378
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KT E EF K++ + V +PT P R+DLP + KW Q S+ G+P+L+
Sbjct: 379 KTSEIEFEKIYNLVVEVIPTYKPTKRLDLPDLLYKDQFSKWNAIAQFCNSVSTTGQPLLI 438
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+T+VE S+ L+ LL + + + +LNA+P+ RE+E VAQAG+K +ITISTNMAGRGTD
Sbjct: 439 GTTTVEKSDMLAQLLNEYNLSYQILNAKPENVRRESEIVAQAGKKNSITISTNMAGRGTD 498
Query: 396 IILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAAL 455
IILGGN +K + D +L+L + AL + + + KL S L+ +
Sbjct: 499 IILGGNINFQIQKELYD--ILILAKTAL-----KQFKNLNDFEKYKLRSVRHNLIQRIRR 551
Query: 456 LAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLI-------DKQSAMYPLGPT 508
L K+ T + ++ FFS + + N EL + + + A+ +
Sbjct: 552 L---------KTITQRCSQKFFSVLLTLITDKNFIELSDIDVLRILQENDRVAIPSISYQ 602
Query: 509 VALTYL--SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
A+ +L ++ + H E VK LGGL V+GT ++SRR+D+QLRGR GRQGDPG+
Sbjct: 603 CAIRFLLNDLIFSTQKHHKQENKIVKNLGGLCVVGTERNDSRRVDDQLRGRCGRQGDPGT 662
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
+RF VSL D + + F V R +D PIE + L Q E+ +
Sbjct: 663 SRFFVSLDDNLLRLFG---GQKVQQFLRNQIPDDSPIESSMMTESLNNAQKQVEERAYEQ 719
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK+L E+DE+L+ QR +Y R+ +L S Y + +V E I K +
Sbjct: 720 RKNLFEYDEILDQQRSIIYFERRLVLESP--SIRNNTLAYGEQIVCEFI-------KQVK 770
Query: 687 YWSLDKLLKEFIAIAGKILDDLFA-GISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
+D L + I K+ ++LF ++ + K+ L E +++++ N++F +
Sbjct: 771 KKEID--LNQMI----KLFENLFGRNLNIKLISKNYSNLTEFDNLELQNYFFQEF----- 819
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
WL Y+A N Y G+ +
Sbjct: 820 --------------WLT-----------YQAKINQFSVY-GN---------------GNK 838
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ ER V + ++ W++HL ++ L AV R +G +NPL EYK + F
Sbjct: 839 IFRNFERQVTLLNINTVWQEHLEKISLLREAVGWRGYGQKNPLTEYKREAYLLF 892
>gi|342215474|ref|ZP_08708121.1| preprotein translocase, SecA subunit [Peptoniphilus sp. oral taxon
375 str. F0436]
gi|341586364|gb|EGS29764.1| preprotein translocase, SecA subunit [Peptoniphilus sp. oral taxon
375 str. F0436]
Length = 913
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 322/925 (34%), Positives = 469/925 (50%), Gaps = 192/925 (20%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF+VQIIGG +LH G IAEMKT VVTVNDYLA RD
Sbjct: 80 MKHFEVQIIGGIILHQGRIAEMKTGEGKTLVATLPAYLNALEGRGVHVVTVNDYLANRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLSVG I M PEER++ Y DITY N+E GFDYLRDN+ E++V
Sbjct: 140 EWMGKIYEFLGLSVGCILHDMTPEERKAAYNADITYGTNNEFGFDYLRDNMVIYKEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R H+ IVDEVDS+LIDE R PL+ISG+ + Y A L
Sbjct: 200 R---DLHYCIVDEVDSILIDEARTPLIISGQGDESTDLYIRARDFVNTLTSRVKSQDEER 256
Query: 148 ----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALK 196
+ + Y ++ K + LT++G A AE ++L D EN A + ALK
Sbjct: 257 ADIFNREFTEETVDYVIDEKQKTSTLTDKGTAKAESYFGIDNLSDMENMELAHHINQALK 316
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A+ +RD+ Y+V+ + +I++E TGR+ RR+S+G+HQA+EAKE ++++A+S +A +
Sbjct: 317 AQGNMKRDIDYVVQENEIIIVDEFTGRLMYGRRYSDGLHQAIEAKEAIEVKAESKTLATV 376
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KL+GMTGTAKTEE+EF +++++ VIE+PTN P IR D+ + K+
Sbjct: 377 TFQNFFRMYDKLAGMTGTAKTEEEEFREIYKIDVIEIPTNKPVIRKDMNDAIYKDEESKF 436
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+ +E+ G+P+LVG+ S+E SE LS LK++GI H VLNA K +E+E VAQ
Sbjct: 437 QAVTEEIVKRHETGQPILVGTISIEKSELLSKYLKRRGIKHQVLNA--KKHKQESEIVAQ 494
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKV 436
AGR A+TI+TNMAGRGTDI+LGGNP+
Sbjct: 495 AGRYGAVTIATNMAGRGTDIVLGGNPE--------------------------------- 521
Query: 437 LSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLI 496
+AK LL + + +A T + SFF ++ + E +KL
Sbjct: 522 ------------FMAKKELLKQGISEA-----TLELVDSFFD-----TEDQEVIEARKLY 559
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
++ A + G E +V + GGLH+IGT HESRRIDNQLRG
Sbjct: 560 QEELARFKEG-----------------TDEEEKKVIQAGGLHIIGTERHESRRIDNQLRG 602
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPGSTRF +S D++ + F+ D V ++ I D PIE + R + Q
Sbjct: 603 RAGRQGDPGSTRFYISGDDDLIRLFAGDRFKKV--MASIDTPPDEPIEHKILTRLIESAQ 660
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E F IRK+++++D+V+ QR+ +Y R+ +L G N I + +VD ++
Sbjct: 661 RKVEGNNFSIRKNVLQYDDVMNKQRQVIYGERRKVLEGQN--LKDDILNMVTGLVDSLVD 718
Query: 677 GNVDPLKHPRYWSLDK--LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINN 734
P +H + +LD+ LL I G ++ G D SI++L E
Sbjct: 719 FYNKPDEHG-HKNLDRQGLLNSLIETFG-FEENELTGHEKD----SIQDLKE-------- 764
Query: 735 FYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYL 794
IR+K+ RY+A
Sbjct: 765 --------------AIRQKAFD----------------RYQA------------------ 776
Query: 795 NVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKID 854
+E + +EVER VL++ +D W DH+ M++L + +R+ G +P Y+ +
Sbjct: 777 ---KEEEFGSDKFREVERVVLLQVVDQKWMDHIDAMDQLRQGIGLRAVGQVDPARAYQNE 833
Query: 855 GCRFFISMLSATRRLTVESLVQYWS 879
G F +M R TV+ L ++
Sbjct: 834 GFDMFEAMNETIREDTVKMLFHVYN 858
>gi|386856423|ref|YP_006260600.1| protein translocase subunit secA [Deinococcus gobiensis I-0]
gi|379999952|gb|AFD25142.1| Protein translocase subunit secA [Deinococcus gobiensis I-0]
Length = 869
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 320/899 (35%), Positives = 451/899 (50%), Gaps = 166/899 (18%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH G IAEM+T +VTVNDYLA+ E
Sbjct: 80 RHYDVQLIGGTALHQGRIAEMRTGEGKTLVATLALALNALEGKGCHLVTVNDYLARVGME 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGL+VGL R + P E+++ Y CDITY NSELGFDYLRDN+A + E LV+R
Sbjct: 140 EMGLLYRTLGLTVGLASRDLQPHEKQAAYACDITYVTNSELGFDYLRDNMAQSREALVLR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P +F+IVDEVDS+LIDE R PL+ISG A K Y V AK+ L +G
Sbjct: 200 ADTPLNFSIVDEVDSILIDEARTPLIISGAAEKATDLYYVYAKLIRRLQKGEPAEPGKRA 259
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YT++ K V L E GI+ E L DL+ EN A + A++A+E Y+R+
Sbjct: 260 EATGDYTIDEKGKQVHLNESGISKIERLLSLPDLYSPENMDKAHMITQAIRARELYQREK 319
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +II+E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 320 DYIVNAEGEVIIIDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRL 379
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K SGMTGTAKTEEKEFL ++ V+ +PTN P +R D + + GK+ EV
Sbjct: 380 YGKFSGMTGTAKTEEKEFLDIYGSDVLVIPTNKPILRKDADDLVYRSRLGKYNAVVSEVA 439
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
M GRP+L+G+ S++ SE LS+LL Q GI H+VLNA K+ A+EA VAQAGR +T
Sbjct: 440 EMHATGRPILIGTASIDTSEQLSELLTQAGIQHSVLNA--KFEAQEASIVAQAGRSGTVT 497
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGS 444
I+TNMAGRG ++I LG
Sbjct: 498 IATNMAGRG--------------------------------------------TDIMLGG 513
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYP 504
+ A+Y+ G+S Q S + E+VE +K + + + A+
Sbjct: 514 N-----------AEYI---IGESLETQLGVSRYDETVEAF----IKAVSRQDPEAEALGM 555
Query: 505 LGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
P V ++ + + V+ LGGLH++GT HESRRIDNQLRGRAGRQGDP
Sbjct: 556 KIPGVTREFVGQALALQAATIEDRQRVRDLGGLHIVGTERHESRRIDNQLRGRAGRQGDP 615
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
GS+RF VS +D++ + F+ V ++ R+ D+ PIE + + Q E F
Sbjct: 616 GSSRFYVSFEDDLMRLFA--NERVVGMMDRLGMDDSQPIEAKMVTGAIERAQARVEDRNF 673
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
RK L+EFD V+ QR VY R+ +L G + + + VD + + ++
Sbjct: 674 STRKQLLEFDNVMSKQRDTVYAQRREVLLGPDNDVEESTEGMIADFVDMQLSVHAPADQN 733
Query: 685 PRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPP 744
P W ++ A+ +LD +P+L D
Sbjct: 734 PDTWDIE-------ALQAAMLD----------------AIPQLEGYDF------------ 758
Query: 745 NLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD 804
RG+ + R LA +D + R+ L ++ S SRY
Sbjct: 759 EALRGV-SPAELQDRMLAAVAD----------VFDARREELSPTMLNSL------SRY-- 799
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
VL++T+D W++HL M+ L + +R +G R+P EYK + F M+
Sbjct: 800 ---------VLLQTVDQHWKEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATNMFNEMI 849
>gi|376403676|ref|YP_005090037.1| secA gene product (chloroplast) [Fucus vesiculosus]
gi|269991239|emb|CAX12417.1| preprotein translocase subunit A [Fucus vesiculosus]
Length = 877
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 282/700 (40%), Positives = 411/700 (58%), Gaps = 70/700 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQI+GG VL+DG IAEMKT +VT+NDYLA+RDA
Sbjct: 76 LRHYDVQILGGLVLNDGQIAEMKTGEGKTLVSTSPAVVNSLSGNSVHIVTINDYLAKRDA 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HR LGL VGLIQ M ERR+NY DI Y N +L FD+L+DN+ + + LV
Sbjct: 136 EWMGQIHRLLGLKVGLIQGEMPISERRTNYLRDIIYVTNVDLVFDFLKDNMVLDKKDLVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+LIDE R PL+IS E++ +Y A +V++ L H+ ++ K
Sbjct: 196 R---PFNFCIIDEVDSILIDEARTPLIISRESNLMTEKYFKANEVSKYLENKRHFEIDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G+A ++ L ++++ DPW +++N+LKA+ + RD+ YI++N + +II
Sbjct: 253 AKKVSLTEKGLARTKILLNVDNIYSIQDPWIPYILNSLKARYLFFRDIHYILKNNQIVII 312
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E R+W +G+HQA+EAKE +++ S +A ITYQ+ F+LYPK+SGMTGTAKT
Sbjct: 313 DEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKT 372
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF ++ + V +PT R D F KW QE M+ +G+PVLVG+
Sbjct: 373 EELEFENIYNLSVSILPTYKKMKRNDKSDFIFIDEISKWRAIAQECLKMYSIGQPVLVGT 432
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+++NSE LS LL+ IPH +LNA+P+ +EA+ VAQAG +ITI+TNMAGRGTDI+
Sbjct: 433 TTIQNSEVLSQLLQTYNIPHQLLNAKPENIQKEAKIVAQAGCLNSITIATNMAGRGTDIL 492
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP+ K I R +L E N + D I L S LAL
Sbjct: 493 LGGNPEY--KAIECTRFILKKLIEKDNFFIVD----------INLISLKLAL-------- 532
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPT-VALTYLSV 516
K K TY + NL L + + + + L + + Y +
Sbjct: 533 ----KKNPKLITYLQN--------------NLDTLLTIFEISNKRFNLLESLINNLYEEL 574
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + + E VK LGGL+VIGT HESRRIDNQLRGR+GRQG+PGS+RF +SL D
Sbjct: 575 LIKYKQRQNQESDIVKSLGGLYVIGTERHESRRIDNQLRGRSGRQGNPGSSRFFLSLNDP 634
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ + F + + + ++ D ++ ++ + L Q E +Y+ RK+L ++D+V
Sbjct: 635 LIRIFGGNK--IQETMQKLKIDNEI-LDSKFLSNSLDSAQQKVEGFYYDQRKTLNKYDQV 691
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
L+ QRK +Y LR+ +L+ + ++ + +D+ I+
Sbjct: 692 LDKQRKVIYYLREKVLSTT--VIRDLVMEFSEGFLDDFIY 729
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 781 LRKYLGDILIASYLNVVQESRY----DDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
L+K+L + L ASY + +E Y D + + + + +K +D +W HL NMN L A
Sbjct: 771 LKKFLYEQLWASY--ICKEFHYCCSTDSRVLDKYNQLIFLKYIDFYWYKHLENMNFLLDA 828
Query: 837 VNVRSFGHRNPLEEY 851
++ ++ ++P +Y
Sbjct: 829 ISWEAYAQKDPFLQY 843
>gi|215400822|ref|YP_002327583.1| preprotein translocase subunit [Vaucheria litorea]
gi|194441272|gb|ACF71000.1| preprotein translocase subunit [Vaucheria litorea]
Length = 866
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/697 (38%), Positives = 407/697 (58%), Gaps = 71/697 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R +D Q++GG +L++ IAEM+T ++TVN+YLAQRDA
Sbjct: 77 LRQYDTQLLGGLILNENKIAEMRTGEGKTLVATAPAFVNALSGEGVHIITVNEYLAQRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFL L VGL+ M ++R NY D+TY NSELGFD+LRDNL LV
Sbjct: 137 EWMGQVYRFLDLQVGLVLSQMESLQKRKNYNRDVTYITNSELGFDFLRDNLITQITDLVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++ I+DEVDS+LIDE R PL+ISG++ ++ + A +V + L + Y V+ K
Sbjct: 197 R---PLNYCIIDEVDSILIDEARTPLIISGQSKIEIFKIIKATEVVKFLEEFKDYDVDKK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ ++ LT GI + L+ N++++ +PW F++NALKAK + +D+ YIV+N + +I+
Sbjct: 254 SKTISLTNLGIRKIQQLLKVNNIYNSGEPWIPFILNALKAKTLFLKDIHYIVKNNEIIIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + R+W+EG+H A+E+KE + S +A ITYQ+ F+LYPK+SGMTGTAKT
Sbjct: 314 DEFTGRILKGRKWAEGLHNAIESKENIYNTEGSETIASITYQNFFRLYPKISGMTGTAKT 373
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF ++ + V +PT P R+DL + KW+ E + M+++GRPVLVG+
Sbjct: 374 AELEFENIYNLSVSVLPTFKPIRRLDLSDNIYIDEITKWKAIANECKEMYKIGRPVLVGT 433
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+++NSE LS LL ++ I H +LNA+PK RE+E +AQAG ++TI+TNMAGRGTD++
Sbjct: 434 TTIQNSETLSFLLLEKNISHALLNAKPKNIKRESEIIAQAGCLGSVTIATNMAGRGTDVL 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP+ A + + +L LN +V++ + +L +IK ++L
Sbjct: 494 LGGNPEFKAY----SKTITILQSILLNKKVEEIPNINNLLEKIKEHKNTL---------- 539
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
+S N + L +I+ + + L +L
Sbjct: 540 -------------------------ISLQYNFETLLNVINIPNKNLNYFENLILNLYKIL 574
Query: 518 -KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
K + C NE +V +LGGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF +SL D
Sbjct: 575 FKKYQQECLNEKEKVLKLGGLYVIGTERHESRRIDNQLRGRAGRQGDPGTSRFFLSLNDP 634
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ + F + + I +I + +E + + L Q E +Y+ RK+L ++D+V
Sbjct: 635 LLKIFGGE---KIQTILKIFQMSEEALESKFLSQSLDSAQQKVEGFYYDQRKTLNKYDKV 691
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDE 673
L+ QR Y R+ IL +N I ++ +A++ E
Sbjct: 692 LDKQRSIFYAFRKKILISSN--IRTIILEFGEAIIYE 726
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 802 YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFIS 861
YD + E+ +++K +D +W HL NMN L V ++ ++P +Y+ F +
Sbjct: 788 YDIQIFRLYEKLLVLKYIDLYWSKHLDNMNFLRDTVTWEAYAQKDPFIKYEEQASILFTN 847
Query: 862 MLSATRRLTVESLV 875
R + + SL+
Sbjct: 848 TFKECRNMIIHSLL 861
>gi|384208467|ref|YP_005594187.1| Preprotein translocase subunit SecA [Brachyspira intermedia PWS/A]
gi|343386117|gb|AEM21607.1| preprotein translocase, SecA subunit [Brachyspira intermedia PWS/A]
Length = 980
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 322/902 (35%), Positives = 477/902 (52%), Gaps = 153/902 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQVMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMTPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVTRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+FAIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYFAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAEVDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y ++ K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLDEKDKNVYLTEEGVHKVEKLLNVENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
+DV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 KDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+P LVG+ SVE +E LS + K+ I H VLNA K +REA +AQAG A
Sbjct: 459 IKELQDAGKPALVGTVSVEMNEELSKVFKRHKINHEVLNA--KNHSREAAIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKL 442
+T++TNMAGRGTDI+LGGNP +AK + E +L+L R+ E D P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--VAKGVAEIEQILVLMRDKAFKERD-----PYKKEELTK 569
Query: 443 GSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAM 502
S+ L +A + + GK E E+ E++Q N E+ + ID+
Sbjct: 570 KVKSIDLYKEAFVRSVISGKIE--------------EAKELAQKNNADEMIEKIDR---- 611
Query: 503 YPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
+ + S + +V + GGLHVIG+ HE+RRIDNQLRGR+GRQG
Sbjct: 612 -----IIQINEKSKIDKEKVLAA---------GGLHVIGSERHEARRIDNQLRGRSGRQG 657
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPG + F +SL+D++ + F + + L + +E++ + + + + Q E
Sbjct: 658 DPGLSVFFLSLEDDLMRLFGGERVSKMMLAMGMGEEEELGHK--WLNKSIENAQRKVEGR 715
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
F IRK L+E+D+V+ QR VY R IL ++ S ++ + + V +E I D
Sbjct: 716 NFDIRKHLLEYDDVMNQQRMAVYGERDYILY--SDDISPRVEEIISEVTEETIKDISDNK 773
Query: 683 KHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPK 742
KH + K L ++ GI D K++E
Sbjct: 774 KHVDPLEVTKWLNSYL-----------IGIDEDAANKAVE-------------------- 802
Query: 743 PPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRY 802
G+ D+ KN L ++L+ +Y E
Sbjct: 803 -----GGV---------------DNAVKN-------------LTNLLLEAYKKKSLE--V 827
Query: 803 DDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
D+ +EVE+ + + +D W+DHL M+ L + +R + +NPL EYK++G + F++
Sbjct: 828 DEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGYAEKNPLTEYKLEGYKMFVAT 887
Query: 863 LS 864
++
Sbjct: 888 MN 889
>gi|262198409|ref|YP_003269618.1| preprotein translocase subunit SecA [Haliangium ochraceum DSM
14365]
gi|262081756|gb|ACY17725.1| preprotein translocase, SecA subunit [Haliangium ochraceum DSM
14365]
Length = 1067
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/680 (42%), Positives = 393/680 (57%), Gaps = 89/680 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG +LH G IAEM+T VVTVNDYLA+RDA
Sbjct: 79 MRHFDVQLIGGMILHRGKIAEMRTGEGKTLVATLPAYLNALPGRGVHVVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGL VG++ G+ R+ Y DITY N+E GFDYLRDN+ + +++V
Sbjct: 139 AWMGRLYGFLGLEVGVVIHGLDDYARQRQYNADITYGQNNEFGFDYLRDNMKMSPDRMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +AIVDEVDS+LIDE R PL+ISG A + Y +V L + + +TV+ K
Sbjct: 199 RH---HAYAIVDEVDSILIDEARTPLIISGPAERSADLYKTVDRVVPKLKRDIDFTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+S LT+ G+ E L+ +L+D N + V +L+A Y+RDV Y+V+N K +I
Sbjct: 256 AHSAMLTDAGVEKIEELLDIENLYDPANIAYNHHVAQSLRAHTLYKRDVNYLVQNSKIVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR RRWS+G+HQA+EAKEG+KI+ ++ +A IT+Q+ F+LY KLSGMTGTA
Sbjct: 316 VDEHTGRTMPGRRWSDGLHQAIEAKEGVKIEEENQTLATITFQNYFRLYDKLSGMTGTAD 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++++ V +PTN P R D P + RGK+ E++ G+PVLVG
Sbjct: 376 TEAPEFHQIYKLDVTVIPTNKPIARDDAPDLVYKNERGKFHAVIDEIKEAHEKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SVE SE +++ LK+ +P +VLNA K+ EA VAQAGRK +ITISTNMAGRGTDI
Sbjct: 436 TVSVEKSEVVANQLKKAKLPFHVLNA--KHHQSEASIVAQAGRKGSITISTNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
+LGGN + +AK +E R A E+ DK + + S +LA L +A
Sbjct: 494 VLGGNAEAMAKDELEQE------RAAFVAELADKRKEQRKSLQKAEDSEALAALDEAL-- 545
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSV 516
E + F E L EL +KQ
Sbjct: 546 ---------------EDEGFDEEG-------RLAELLAKYEKQ----------------- 566
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
CS E EV GGL ++GT HESRRIDNQLRGRAGRQGDPG++RF +SL+D+
Sbjct: 567 -------CSAEREEVLEAGGLKIVGTERHESRRIDNQLRGRAGRQGDPGASRFYLSLEDD 619
Query: 577 MFQKFSFD--TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
+ + F+ D T W + R+ +ED+PIE + R + Q E F +RK+L+E+D
Sbjct: 620 LLRIFNADFVTRW----MERLGMEEDVPIESGMVTRAIEKAQKQVEGRNFDMRKNLLEYD 675
Query: 635 EVLEVQRKHVYDLRQSILTG 654
+V+ QRK +Y LR+ IL G
Sbjct: 676 DVMNQQRKTIYGLRRQILEG 695
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
R ++ +D W DHL M++L + +R +G ++P +EYK +G F M+
Sbjct: 907 RHFFLEEIDQQWVDHLKTMDQLREGIGLRGYGQKDPKKEYKKEGFDLFGGMM 958
>gi|266999|sp|Q01570.1|SECA_PAVLU RecName: Full=Protein translocase subunit SecA
gi|12117|emb|CAA46776.1| secretory protein for transport of proteins across membranes
[Pavlova lutheri]
Length = 891
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 288/705 (40%), Positives = 408/705 (57%), Gaps = 64/705 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG +LHD IAEMKT +VTVN+YLA+RD+
Sbjct: 77 LRHYDVQLIGGCILHDSKIAEMKTGEGKTLVAILPAYLNALSGKSVHIVTVNEYLAKRDS 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ RV FLGLSVGLI M EER+ NY+CD+ YT NSELGFDYLRDNL N + V
Sbjct: 137 LSVGRVLSFLGLSVGLILADMNREERQENYKCDVIYTTNSELGFDYLRDNLVGNPSEKVQ 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
F FAI+DEVDSVLIDE R PL+IS Y A VA+ HY ++ +
Sbjct: 197 NG---FEFAIIDEVDSVLIDEARTPLIISRSLETLNNIYLTAKNVAQAFEINTHYEIDKR 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V L E G LAE L + ++ +++NA+KAKEFY +D Y+V + I+
Sbjct: 254 NRNVYLNESGSKLAEKLLGVSSIY--KFETGTYILNAIKAKEFYTKDKDYLVMRNQITIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RRW +G+HQA+EAKEG+ + ++++ +A ITYQ+ F Y KLSGMTGTA T
Sbjct: 312 DEFTGRILKGRRWGDGLHQAIEAKEGVTVGSETMTMASITYQNFFLFYKKLSGMTGTALT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E KEF K++ + V VP N R+D + + KW+ E S+ GRP+L+G+
Sbjct: 372 EAKEFKKIYNLSVDCVPINKKVNRIDKEDVVYKSLYAKWKAVLYESLSIHEQGRPLLIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
++V+NSE +S LLK+ I H++LNA+P+ AA E+E +AQAGRK ++TI+TNMAGRGTDI+
Sbjct: 432 SNVKNSEIVSGLLKEYNIKHSLLNAKPENAANESEIIAQAGRKGSVTIATNMAGRGTDIL 491
Query: 398 LGGNPKMLAKKIIEDRLL---LLLTREALNVEVDDKTSSPK---VLSEI-KLGSSSLALL 450
LGGNP L K E R + ++L+ + + V ++ ++ K V+SE +L L
Sbjct: 492 LGGNPDFLTKG--ELRYIFRSIVLSLDDMTVPKNELINNLKYKYVISEKNRLDVEELIDK 549
Query: 451 AKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVA 510
K+A E +E ES + + +QKL +K Y
Sbjct: 550 LKSAYTV-----PEKNRIGVEELIENIDESFQPVDKFEIL-IQKLYEKTKERYVR----- 598
Query: 511 LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM 570
C E EV +LGGLH+IGT H+SRRIDNQLRGRAGRQGDPGS++F
Sbjct: 599 ------------ECLAEKEEVIQLGGLHIIGTEKHDSRRIDNQLRGRAGRQGDPGSSKFF 646
Query: 571 VSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
+S +D + + F+ T ++I + ++D P+EG + + Q E + +RK L
Sbjct: 647 LSFEDRLIEIFT--TGGLKNMIKELDLEDDQPVEGKIVSLSIESAQKRIEDKNYQVRKQL 704
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+D VL +QRK +YD R L+ + I QY++ +VD+++
Sbjct: 705 FNYDNVLNLQRKVIYDERDRFLSLTD--FKGLILQYLEKLVDDVV 747
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ +E A L++++D W++ L M L ++ R++G R+PL EY+ + R F
Sbjct: 818 QSLEYAFLLQSIDQVWKEQLTRMELLKESIGWRAYGQRDPLLEYQKEAYRIF 869
>gi|403066544|ref|YP_006639033.1| preprotein translocase subunit A (chloroplast) [Saccharina
japonica]
gi|378787457|gb|AFC40087.1| preprotein translocase subunit A (chloroplast) [Saccharina
japonica]
Length = 877
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 318/878 (36%), Positives = 470/878 (53%), Gaps = 137/878 (15%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG VL+DG IAEMKT +VT+NDYLA+RDA
Sbjct: 76 LRHYDVQLLGGLVLNDGKIAEMKTGEGKTLVSTSPALANSLAGKGVHIVTINDYLAKRDA 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HR LGL VGLIQ M +R+ NY DITY N +L FD+L+DN+ + ++LV
Sbjct: 136 EWMGQIHRLLGLGVGLIQSDMTIADRKINYSRDITYVTNVDLVFDFLKDNMVTDKKELVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+F I+DEVDS+LIDE R PL+IS ++ V +Y A + ++ L H+ ++ K
Sbjct: 196 R---PFNFCIIDEVDSILIDEARTPLIISRDSDLLVEKYFKANEASKYLEDKKHFEIDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LTE+G+ ++ L+ ++L+ DPW +++N+LKA+ + RD+ YI+++ + +II
Sbjct: 253 AKKISLTEQGLKRTKILLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVII 312
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E R+W +G+HQ++EAKE ++ S +A ITYQ+ F+LYPK+SGMTGTAKT
Sbjct: 313 DEFTGRIMEGRKWGDGLHQSIEAKENIQNLRGSETLASITYQNFFRLYPKISGMTGTAKT 372
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF ++ +PV +PT R D F KW QE M+ GRPVLVG+
Sbjct: 373 EELEFENIYDLPVSILPTYEKMKRKDDSDFIFIDEISKWRAIAQECLKMYSTGRPVLVGT 432
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+++NSE LS LL +PH +LNA+P+ ++E++ VAQAG +ITI+TNMAGRGTDI+
Sbjct: 433 TTIQNSEILSQLLNTYRVPHQLLNAKPENVSKESKIVAQAGCLNSITIATNMAGRGTDIL 492
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP+ A + L LL ++ V D L ++K L K+ L
Sbjct: 493 LGGNPEFKALESTRFILKRLLGKKKFFVPGID-------LRKLKRA------LKKSPKLV 539
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMS-QSMNLKELQKLIDKQSAMYPLGPTVALTYLSV 516
Y+ Q+ S+E+S + +NL E + ++ L + Y
Sbjct: 540 TYL----------QKNLDTLLASLEVSNKQLNLLE--------NFIFNLHSQLLSKYKEK 581
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
K+ E VK LGGL+VIGT HESRRIDNQLRGRAGRQG+PGS+RF +SL D
Sbjct: 582 QKE-------ESEIVKSLGGLYVIGTERHESRRIDNQLRGRAGRQGNPGSSRFFLSLNDP 634
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ + F D +I E ++ + L Q E +Y+ RK+L ++D+V
Sbjct: 635 LIRVFGGDKIQETMQKLKI---ESEILDSKFLSDSLNSAQQKVEGFYYDQRKTLNKYDQV 691
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
L+ QRK +Y LR+ +L+ M+ +V E G +D LD +E
Sbjct: 692 LDKQRKVIYYLREKVLSTT----------IMRDLVMEFSEGFLDDFID----YLDSQTRE 737
Query: 697 FIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINN-FYFPDLPKPPNLFRGIRRKSS 755
G ++ S + L LN + I+N + +L K S
Sbjct: 738 -----------------GKDIILSKKILRLLNRLSISNGMIYNNLDKL-----------S 769
Query: 756 SLKRWL--AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERA 813
LK++L + + K RY +T +SR D Y +
Sbjct: 770 KLKKFLYEQLWASYACKEFRYSCST--------------------DSRVLDRY----NQL 805
Query: 814 VLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEY 851
+ K +D FW HL NMN L A++ ++ ++P +Y
Sbjct: 806 IFFKYIDFFWFKHLENMNFLLDAISWEAYAQKDPFLQY 843
>gi|334564512|ref|ZP_08517503.1| preprotein translocase subunit SecA [Corynebacterium bovis DSM
20582]
Length = 869
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 311/900 (34%), Positives = 456/900 (50%), Gaps = 177/900 (19%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G +AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYRVQVMGGAALHWGYVAEMKTGEGKTLTCVLPAYLNALAGKGVHVVTVNDYLARRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL+ +I P ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHRFLGLTTDVILSDKQPAERREAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG + +++ + + +HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVGGSSQWFTAFSRIVPKMTRDIHYDVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ L E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 KTIGVREEGVELVEDQLGIDNLYSPEHSQLVSYLNNAIKAKELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RR++EG+HQA+EAKEG++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRILDGRRYNEGMHQAIEAKEGVEIKNENQTLATVTLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++++ V +PTN PN R D + T K+ ++ G+PVLVG+
Sbjct: 377 EASELKSIYKLDVAPIPTNKPNQREDRVDLVYKTQEAKFAAVADDIAERVEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+ +G+ HNVLNA KY +EA+ VAQAGR A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQSRGVRHNVLNA--KYHEQEAQIVAQAGRAGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGNP ++A + +R L D +P
Sbjct: 495 LGGNPDIIADINLRERGL-------------DPVETP----------------------- 518
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
+E ++ + E +E ++ + KE +K+I+ +Y LG
Sbjct: 519 -------------EEYEAAWDEEIEKCRATSKKEAEKVIEA-GGLYVLG----------- 553
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
T HESRRIDNQLRGR+ RQGDPG TRF +S++DE+
Sbjct: 554 ------------------------TERHESRRIDNQLRGRSARQGDPGETRFYLSMRDEL 589
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
+F A +++R+ +DMPI+ + + G Q E F +RK+++++DEVL
Sbjct: 590 MTRFVGGRMEA--MMNRLNVPDDMPIDSKMVTNAIKGAQSQVENSNFEMRKNVLKYDEVL 647
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLL 694
QRK +Y R+ IL G E ++QI + M D+ I VD Y W LD L
Sbjct: 648 NEQRKVIYGERRQILEG--EDVARQIRRMM----DDTITAYVDSATAEGYVEDWDLDALW 701
Query: 695 KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKS 754
++ G S EEL + + + P L +++ +
Sbjct: 702 HALESLYGPTF--------------SHEEL-----VAGDEYGKPGELSASQLLEALKKDA 742
Query: 755 SSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAV 814
++ L + + R A+ LNVV +
Sbjct: 743 NAQYDELESAVTAIGGEDQMRGMER-----------AALLNVVDQK-------------- 777
Query: 815 LVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
WR+HL M+ L + +R+ R+PL EY+ +G F M + TV L
Sbjct: 778 --------WREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGGDMFTRMKDGIQEETVRQL 829
>gi|299830585|ref|YP_003735033.1| preprotein translocase subunit A [Durinskia baltica]
gi|297384949|gb|ADI40248.1| preprotein translocase subunit A [Durinskia baltica]
Length = 886
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/705 (39%), Positives = 402/705 (57%), Gaps = 66/705 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG VL++ IAEMKT +VTVNDYLA RD
Sbjct: 75 LRHFDVQLIGGLVLNNQKIAEMKTGEGKTLVATLPACLNALTNNGVHIVTVNDYLASRDQ 134
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M ++++FLG GLIQ M ER+ NY DITY N EL FD+LRDN+A N +V+
Sbjct: 135 VSMSQIYKFLGFDTGLIQNDMTSLERKKNYNADITYVTNYELTFDFLRDNMALNLTDVVL 194
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++ I+DEVDS+LIDE + PL+IS V +Y +AA++ L +HY V+ K
Sbjct: 195 R---PFNYCIIDEVDSILIDEAQTPLIISNNIETPVDKYIIAAEITNYLTLNIHYKVDEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N +V LT++G E L DL+D DPW +V+NA+KA + +V YIV+N + +I+
Sbjct: 252 NKNVILTDQGSKQIEQILRIQDLYDVRDPWIPYVINAIKANALFFNNVHYIVQNDRIVIV 311
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRW +G+HQA+EAKE L I+ + VA ITYQ+ F LYPKLSGMTGT KT
Sbjct: 312 DEFTGRIMPDRRWGDGLHQAIEAKEKLPIRQKTETVAAITYQNFFLLYPKLSGMTGTGKT 371
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V E+PT P +R DLP + KW Q + G+P+L+G+
Sbjct: 372 AEIEFEKIYNLSVEEIPTARPTLRKDLPDLIYKDQFSKWSAIAQTCNQISLTGQPILIGT 431
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
T+VE SE L+ LL + + + +LNA+P+ RE+E VAQAG+K AITI+TNMAGRGTDII
Sbjct: 432 TTVEKSEMLAQLLNEYRLSYQILNAKPENVRRESEIVAQAGKKGAITIATNMAGRGTDII 491
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN +K + D +L + R VLS+ ++ +L ++ L
Sbjct: 492 LGGNINFKIQKELYD--ILTVARNY-------------VLSK------NMNIL-QSPLKT 529
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKL-IDKQSAMYPLGPTVALTYLSV 516
K+ W+ Q+ S + V S + L ++ L I +++ + +
Sbjct: 530 KF-------DWSSQKFLSVLTSLVADSNFLKLSDIDILRILRENDKISIPNNSYTCSIKF 582
Query: 517 LKDCEVHCSNEGSE-----VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
L D V + E VK LGGL++IGT ++SRR+DNQLRGR GRQGDPG++RF +
Sbjct: 583 LIDELVLYYRKSQEQENRIVKNLGGLYIIGTERNDSRRVDNQLRGRCGRQGDPGTSRFFL 642
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL D + + F + + +D P+E + + R L Q E+ + RK+L
Sbjct: 643 SLDDNLLRLFG---GPKIQEFMQTQMMDDSPLESNFLTRSLDSAQERVEERAYQQRKNLF 699
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
++D++L QR +Y R+ IL A S + I Y + ++ +I
Sbjct: 700 DYDDILNKQRNIIYFERRQILNSA--SNQKNILAYGEQIITDIFL 742
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 781 LRKYLGDILIASYLNVVQE-SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
L+ YL + +Y + + E + Y D + +ER++++ +D WR+HL M L AV
Sbjct: 786 LKLYLFNEFWLTYQSKINELAVYGDGICENLERSIILINIDRIWREHLQKMTLLREAVGW 845
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
R +G RNPL EYK + F + R L + L++
Sbjct: 846 RGYGQRNPLYEYKQEAFYLFENRKKILRHLVIYDLLR 882
>gi|299116880|emb|CBN74990.1| preprotein translocase subunit SecA [Ectocarpus siliculosus]
Length = 936
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 285/733 (38%), Positives = 407/733 (55%), Gaps = 80/733 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT------------------------VVTVNDYLAQRD 36
+RH+DVQ++GG LH+G +AEM T VVT NDYLA+RD
Sbjct: 112 LRHYDVQLMGGLALHEGKLAEMATGEGKTLVATLPCYLNALAGKGTVLVVTANDYLARRD 171
Query: 37 AEWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLV 96
AE M +VHRFLGLSVGLIQ M +R+ Y CD+TY N ELGFDYLRD+L + V
Sbjct: 172 AETMGQVHRFLGLSVGLIQSTMPEAQRKEAYSCDVTYATNQELGFDYLRDHLTVTQDGTV 231
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
K F F +VDE DS+LIDE R PL+IS ++ + K+A +L +G+HYTV
Sbjct: 232 Q--TKDFFFCLVDEADSILIDEARTPLIISRSVDAPAQKFATSQKIASVLEKGVHYTVSE 289
Query: 157 KNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
K SV LT++G + L ++D DPWA F++N++KAKE + RD +YIVR+ + LI
Sbjct: 290 KEQSVVLTDKGYDDCDRIL-GKSMFDPRDPWAPFIINSVKAKEIFTRDKEYIVRDTEVLI 348
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ +GRV E RR+S+G+HQ++EAKEG+ + S V+AQ+TYQ+LF+ +PKL GMTGTA
Sbjct: 349 VDTFSGRVLEGRRYSDGLHQSIEAKEGITVSKQSQVMAQVTYQALFRSFPKLCGMTGTAM 408
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
T+ E + + V++ P F G EVE + + GRPVL+G
Sbjct: 409 TDANELGTTYGLQVVQERL--------FPDVVFRNREGANAAMLNEVERLHKDGRPVLIG 460
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+T+V S+ + LNA P RE+E V QAGR +T++TNMAGRGTDI
Sbjct: 461 TTNVGMSDQTA----------KTLNANPDLVERESEIVGQAGRLGVVTVATNMAGRGTDI 510
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKV-----LSEIKLGSSSLALLA 451
+LGGNP ++A+ + D L L + +D + PKV E+ +SS
Sbjct: 511 LLGGNPSVMARIRVRDALAAELLSD------EDLAAVPKVGETFFPCELPEDASS----- 559
Query: 452 KAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGP---- 507
L K + +G S + ++S++ + ++ + L+ L+ SA GP
Sbjct: 560 ---ALEKAIAACKGDSALFASD----NDSIDAGELLSREALEGLV---SAACEAGPVEGA 609
Query: 508 ---TVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
V +V K S E +V LGGL+V+GT+ HESRR+DNQLRGRAGRQGDP
Sbjct: 610 GAVAVREAATAVKKSFADALSEEKEKVLELGGLYVVGTARHESRRVDNQLRGRAGRQGDP 669
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
G+TRF +SL D++F+ F D + R+++ D+PIE + L +QI+ E Y+
Sbjct: 670 GATRFFLSLDDDIFRVFGGDQVTKIMDSFRLSD--DIPIENKQVSATLDKVQIATEDYFA 727
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
GIR+++ FDEV+ QR +Y R ++ E + +Y EI+ GN
Sbjct: 728 GIRRTVFSFDEVMNDQRLALYRARDDVIDKEREELRELALEYSAKTCTEIVQGNSASDGT 787
Query: 685 PRYWSLDKLLKEF 697
P+ DKL + F
Sbjct: 788 PKAVLSDKLRQFF 800
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
E R + + +D W HL NMN L +V++ F RNPLEE+ G F+ +L RR
Sbjct: 854 ESARFLTLTQMDDLWCQHLENMNLLKESVSMEVFRGRNPLEEFGAQGKEMFLDLLDNVRR 913
Query: 869 LTVESLVQYWSSPMES 884
TV SL Y SP S
Sbjct: 914 NTVYSLQMYNPSPKTS 929
>gi|323450371|gb|EGB06253.1| hypothetical protein AURANDRAFT_29609, partial [Aureococcus
anophagefferens]
Length = 955
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 284/708 (40%), Positives = 396/708 (55%), Gaps = 59/708 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG LH+G +AEM T V+TVNDYLA+RDA
Sbjct: 77 LRHYDVQLVGGMALHEGKLAEMATGEGKTLVATLPLYLRSLDGKGCHVITVNDYLARRDA 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E ++ + FLGL+VG++Q E+R++ Y D+TY N+ELGFDYLRD+LA + +L +
Sbjct: 137 ETLQPLFDFLGLTVGVVQSESTSEQRQAAYAADVTYVTNNELGFDYLRDHLAYETPELTV 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDV-ARYPVAAKVAELLVQGLHYTVEL 156
+P HFAIVDE DS+L+DE R PL+ISGE D A+Y A L +G Y V+
Sbjct: 197 TQ-RPLHFAIVDEADSILVDEARTPLIISGEGDGDAPAKYEAATLAVNYLERGRDYEVDY 255
Query: 157 KNNSVELTEEGIALAEMALETND----LWDENDPWARFVMNALKAKEFYRRDVQYIVRNG 212
K V LT+ G L D L+ WA +V AL AKE Y ++ YIV G
Sbjct: 256 KARRVTLTDGGYETVADLLGVADDPLGLYGAETKWAAYVFPALNAKELYFKERDYIVDKG 315
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ I++E TGRV E RRW+ G+HQAVEAKE ++++ + V VA ITYQSLF LYP LSGMT
Sbjct: 316 ELKIVDEFTGRVMEGRRWNGGLHQAVEAKEKVEVKPEQVTVASITYQSLFLLYPTLSGMT 375
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTAK+E KE + + V++VPT P R D F + K+ Y ++V+ G+P
Sbjct: 376 GTAKSEAKELGDTYGLDVLKVPTAKPLRREDGGDLVFKSKLDKFRYVLRDVKRRHASGQP 435
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VL G+TS+E++ +S LL +G+PH VLNA PK A +E+E V+QAGR+ A+TI+TNMAGR
Sbjct: 436 VLCGTTSIEDATLVSQLLANEGVPHRVLNANPKLARKESEIVSQAGRRGAVTIATNMAGR 495
Query: 393 GTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAK 452
GTDI+LGGN + AK L REAL VD + L ++ G +A L
Sbjct: 496 GTDILLGGNAALTAK---------LKLREALAPAVDGRLGP---LVAVEPGLYPVADLGD 543
Query: 453 AALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALT 512
A A A + E++ L + + + SA P +LT
Sbjct: 544 AVDGALEAAAAAAAGELRAAIFGDVANGTEVAAGAALDRIDEFVAVASA-----PASSLT 598
Query: 513 YLSV--LKDCEVH-----------CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAG 559
L C E +EV+ LGGL V+GT HES RIDNQLRGR+G
Sbjct: 599 AAGSPGLAACRAAYDAVRAAFGEVVDAERAEVRALGGLAVLGTERHESVRIDNQLRGRSG 658
Query: 560 RQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA 619
RQGD G++ + +SL+D+MF F D + I D+ P++ D + + L +Q
Sbjct: 659 RQGDAGASCYAISLEDKMFNVFGADKMQQLAFAFDIAGDDGEPLQSDLLSKSLATIQEKV 718
Query: 620 EKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYM 667
E YY +R +LV +D++++VQR+ Y+ RQ +LT + + QY+
Sbjct: 719 ETYYREMRTNLVRYDKIVDVQRRVFYNRRQQVLTADRPTVEALMGQYV 766
>gi|295111750|emb|CBL28500.1| protein translocase subunit secA [Synergistetes bacterium SGP1]
Length = 939
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/678 (41%), Positives = 394/678 (58%), Gaps = 68/678 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG LHDG IAEMKT +VTVNDYLA+RDA
Sbjct: 74 LRHYDVQLIGGMALHDGHIAEMKTGEGKTLVATLAVVLNALKGEGVHLVTVNDYLARRDA 133
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM ++ FLGLSVG+I M EER YR DITY NSE GFDYLRDN+ ++Q+V
Sbjct: 134 AWMAPIYNFLGLSVGVIYPYMPAEERYEAYRADITYGTNSEFGFDYLRDNMVMRADQMVQ 193
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P + IVDEVDS+LIDE R PL+ISG + +V Y A VA L +G Y + K
Sbjct: 194 R---PHAYCIVDEVDSILIDEARTPLIISGPSDDNVDLYVKADGVARQLKEGADYEKDEK 250
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
S+ +TE GI E AL+ L+ + + A ++ ALKA + RDV Y+V++G+ +
Sbjct: 251 ERSIAVTEAGIQRCEDALKLPGLFSDAAHSDLAHRIVQALKAHRLFTRDVDYVVKDGEIV 310
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE +K+ +S +A IT Q+ F++Y KL+GMTGTA
Sbjct: 311 IVDEFTGRLMVGRRYSDGLHQAIEAKERVKVGRESQTLATITLQNYFRMYRKLAGMTGTA 370
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF +++ + V+ +PT+ P IR D P + T K+ +VE + G+PVLV
Sbjct: 371 ATEAEEFKEIYGLQVVTIPTHRPMIRKDNPDVIYGTMVEKFNAVADDVEECHKRGQPVLV 430
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ENSE +S LLK + +PH VLNA K+ +EA VAQAG + A+T++TNMAGRGTD
Sbjct: 431 GTTSIENSERVSKLLKARHVPHQVLNA--KHHEKEAHIVAQAGHEGAVTVATNMAGRGTD 488
Query: 396 IILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAAL 455
I+LGGNP+ LA++ LL TR E+ G S L +
Sbjct: 489 IMLGGNPEFLARE------KLLATR-----------------PEVDWGGSGLDEESVYEY 525
Query: 456 LAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLS 515
+Y T A ++ E Q +N E +++ + ++ + Y +
Sbjct: 526 FVRY-----SNLDTENLAANYLKE-----QRVNAAEGAEIVGRLRGIF---ARIKEAYDA 572
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L D C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D
Sbjct: 573 FLVDFSAACREEHEKVAALGGLAIVGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLED 632
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
+ + F + L+ ++ + IE + R + Q E+ +F IRK L+ +D
Sbjct: 633 NLLRLFGSERIQG--LMGKLGMTDGEAIESGMLSRIIESSQHKVEEMHFDIRKQLLAYDN 690
Query: 636 VLEVQRKHVYDLRQSILT 653
V+ QR+ VY R ILT
Sbjct: 691 VMNQQREAVYHERHMILT 708
>gi|289449861|ref|YP_003475380.1| preprotein translocase subunit SecA [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184408|gb|ADC90833.1| preprotein translocase, SecA subunit [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 936
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 330/926 (35%), Positives = 472/926 (50%), Gaps = 185/926 (19%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+ VQIIGG VLH G IAEMKT VVTVNDYLA RD+
Sbjct: 79 MRHYRVQIIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALTGQGVHVVTVNDYLATRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ +LGL+VGLI G+ + RR Y DI Y N+E GFDYLRDN+ + ++V
Sbjct: 139 EWMGKVYTYLGLTVGLIVHGLDNDARRQAYASDIVYGTNNEFGFDYLRDNMVTHKSEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISG--EASKD----VARYPVAAK---VAEL--- 145
R FAIVDEVDS+LIDE R PL+ISG EAS D V + K VAE
Sbjct: 199 R---ELQFAIVDEVDSILIDEARTPLIISGQGEASTDMYKKVNSFVTTLKPFVVAETDSK 255
Query: 146 -----LVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKE 199
L Y V+ K + +T G++ AE + N+L DE N ++ NALKA
Sbjct: 256 EDQDELAGDADYIVDEKAKTAVMTRNGVSKAEQYFQVNNLADEENYDLQHYINNALKAHG 315
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
RD QY+V++G+ +I+++ TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q
Sbjct: 316 TMHRDDQYVVQDGEVIIVDDFTGRLMYGRRYSDGLHQAIEAKEGVKVENESKTLATITFQ 375
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F++Y KLSGMTGTA TEE EF ++ + VI +PTN P R+D + T RGK++
Sbjct: 376 NYFRMYAKLSGMTGTALTEEDEFRSIYSLDVICIPTNRPIARLDEHDSIYKTERGKYKAI 435
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
+EV+ + G+PVL+G+ SVE SE LSDL + GI HNVLNA K REAE VAQAGR
Sbjct: 436 IEEVKKVHAQGQPVLIGTVSVEKSELLSDLFTRVGIKHNVLNA--KQHQREAEIVAQAGR 493
Query: 380 KYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLL--LLLTREALNVEVDDKTSSPKVL 437
A+TISTNMAGRGTDI+LGGNP+ +AK + + L+ + + E DD P +L
Sbjct: 494 YGAVTISTNMAGRGTDILLGGNPEYMAKAELRKQGFEPELVEQSTTHNETDD----PLIL 549
Query: 438 SEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLID 497
+I+ YQE + FS+S++ E K+I
Sbjct: 550 -DIR--------------------------QRYQELEKNFSDSIK-------DEKDKVI- 574
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K +Y LG T HESRRIDNQLRGR
Sbjct: 575 KAGGLYILG-----------------------------------TERHESRRIDNQLRGR 599
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGDPG ++F +SL+D++ + F D L + + DEDM ++ + +Q+ Q
Sbjct: 600 AGRQGDPGKSKFYLSLEDDLLRLFGGDR--MTKLFNSLGVDEDMELQNRMLSKQIENAQK 657
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E FGIRK ++E+D+V+ QR+ +Y R+ +L G E +++ + +
Sbjct: 658 KVEGRNFGIRKHVLEYDDVMNKQREVIYAQRRRVLEG--EDLQDTYRNMIESTLKRVFAK 715
Query: 678 NVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF 737
+P + W + L + I G I D +LK E + + N++D
Sbjct: 716 YCNPDEPAEEWEISGLTANLLDITGPI----------DPVLKLKELIAQNNTLD----EI 761
Query: 738 PDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVV 797
D+ L R R+ D+L + L+R+ IL+ S
Sbjct: 762 IDITVQAALDRYASRE------------DEL-------GSPELMREIERVILLRS----- 797
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+D W DH+ M+ L ++ +RS+ +P+ EYK++G +
Sbjct: 798 ---------------------VDQKWMDHIDLMDDLRDSIGMRSYAQHDPVMEYKMEGFQ 836
Query: 858 FFISMLSATRRLTVESLVQYWSSPME 883
F M ++ + V +++ P E
Sbjct: 837 MFEEMNNSIQEAAVRMILRANFRPEE 862
>gi|229815729|ref|ZP_04446054.1| hypothetical protein COLINT_02778 [Collinsella intestinalis DSM
13280]
gi|229808645|gb|EEP44422.1| hypothetical protein COLINT_02778 [Collinsella intestinalis DSM
13280]
Length = 994
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 318/901 (35%), Positives = 461/901 (51%), Gaps = 150/901 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG LHDG I+EMKT +VTVNDYLA+RD+
Sbjct: 79 LRHFDVQLIGGMALHDGMISEMKTGEGKTLVSTLAGYLNALAGKGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RFL L VGL+Q GM +++R Y D+TY NSE GFDYLRDN+ + Q V
Sbjct: 139 EWMGHIYRFLKLEVGLLQNGMPLDQKRRAYDADVTYGTNSEFGFDYLRDNMVLRAGQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R FAIVDEVDS+LIDE R PL+ISG +K + Y A+ L QG
Sbjct: 199 RG---HAFAIVDEVDSILIDEARTPLIISGAGTKSASTYKDFARAVRGLTQGEEVNFDML 255
Query: 152 ----------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEF 200
+ ++ +++ TE+G+ E L D++ D + + ALKA+
Sbjct: 256 SGEAVEATGDFVMDEAKHTIAATEQGLKKIEQRLGIEDIYSDLSGALVNHLQQALKAQYM 315
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+ RD QY+V NG+ I++E TGR+ E RR+SEG+HQA+EAKEG+ ++ ++ +A IT Q+
Sbjct: 316 FHRDKQYVVTNGEVKIVDEFTGRIMEGRRYSEGLHQAIEAKEGVLVREENQTLATITLQN 375
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F+LY KLSGMTGTA TE+ EF +++ +PV +PTN P RVD + T K+
Sbjct: 376 YFRLYDKLSGMTGTAITEDAEFREIYNLPVQVIPTNRPVARVDHDDLVYRTIDAKFNAVA 435
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
E+E G+PVLVG+ S+E+SE LS LL ++GI H VLNA K+ REA+ VAQAGR
Sbjct: 436 DEIEQRHAAGQPVLVGTVSIESSERLSRLLNKRGIKHEVLNA--KFHEREAQIVAQAGRL 493
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+TI+TNMAGRGTDI+LGGN + + +E+ + +A VE + ++ +++ I
Sbjct: 494 GAVTIATNMAGRGTDILLGGNAEEMT---VEELMGFDFGVDATVVERILREANWELVDGI 550
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKL-IDKQ 499
+ G A+ VG+ E + F + L LQ+L ID
Sbjct: 551 ERG-------------AERVGEP-------AEREGF---------PLMLTGLQELGIDIT 581
Query: 500 SAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAG 559
+ +AL + C E V GGL VIGT HESRRIDNQLRGRAG
Sbjct: 582 AEQL---ADIALKREQIGDKMAAMCRAEHDRVVAAGGLTVIGTERHESRRIDNQLRGRAG 638
Query: 560 RQGDPGSTRFMVSLQDEMFQKFSFDTSWAV-DLISRITNDEDMPIEGDAIVRQLLGLQIS 618
RQGD G T+F +SL+D++ + F + + +L+ +DMPI+ I + + G Q
Sbjct: 639 RQGDAGETQFYLSLEDDLMRMFGGERMEKISNLMVATEMGDDMPIQHKMISKAVEGAQRK 698
Query: 619 AEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGN 678
E F +RK+++E+D+V+ QR+ +Y R IL G + S +DE+I
Sbjct: 699 VENINFSMRKNVLEYDDVMNKQRQVIYAERNKILDGKDLSDH----------IDEVI--- 745
Query: 679 VDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFP 738
GDT+ + + E ++S D
Sbjct: 746 -----------------------------------GDTINRCVTEFCPVDSHDGE----- 765
Query: 739 DLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ 798
R L +W+ + A N L + + D + ++ +
Sbjct: 766 -------------RDLEGLHKWVVELTGRPDAPAFEDAPYNALCEQVLDFV--KHMYDAK 810
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
R M E++R V+++ +D W +L M+ L + +R FG R+PL EYK + R
Sbjct: 811 AERLGSDLMGELDRQVMLRVIDTRWMGYLQEMDYLKQGIGLRGFGQRDPLVEYKTEAFRA 870
Query: 859 F 859
F
Sbjct: 871 F 871
>gi|298243419|ref|ZP_06967226.1| preprotein translocase, SecA subunit [Ktedonobacter racemifer DSM
44963]
gi|297556473|gb|EFH90337.1| preprotein translocase, SecA subunit [Ktedonobacter racemifer DSM
44963]
Length = 1154
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 320/906 (35%), Positives = 474/906 (52%), Gaps = 160/906 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH G IAEM T +VTVNDYLA+RD+
Sbjct: 271 MRHYDVQLIGGIVLHQGKIAEMGTGEGKTLVATSPIYLNALTGKGVHLVTVNDYLARRDS 330
Query: 38 EWMERVHRFLGLSVGLIQRGMIP--EERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM R+++FL L+VG++ + P ER + Y+ DITY N+E GFDYLRDN+ + +Q+
Sbjct: 331 EWMGRIYKFLDLTVGVVVNAIDPYTPERNAAYQADITYGTNNEFGFDYLRDNMVTSLDQV 390
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVE 155
+ R +FAIVDEVD++LIDE R PL+ISG+ + Y A+ L YT++
Sbjct: 391 MQR---ELYFAIVDEVDNILIDEARTPLIISGQGQESTDMYAQFARWVPRLKAETDYTID 447
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKA 214
K SV +TEEGI E +++DE N R++ NALKA+ ++RD YIV++G+
Sbjct: 448 EKTRSVLMTEEGIEKIEKLAGVTNIYDEENLDLTRYMENALKAEIIFKRDKDYIVKDGEV 507
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGR RR+SEG+HQA+EAKEG+K+Q ++ +A IT+Q+ F+LY KL+GMTGT
Sbjct: 508 VIVDEFTGRQMAGRRYSEGLHQAIEAKEGVKVQRENHTLATITFQNYFRLYEKLAGMTGT 567
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE +EF K++++ V+ VP N P +R D+ + T K+ +E++ + +PVL
Sbjct: 568 AMTEAEEFHKIYKLDVVNVPPNKPRVREDMSDYIYRTQEAKFNAVVEEIKECYEREQPVL 627
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+TSVE SE LSD+LK+QG+PH VLNA K+ REA VAQ AGR +
Sbjct: 628 VGTTSVEISELLSDMLKKQGVPHEVLNA--KHHEREAHIVAQ-------------AGRSS 672
Query: 395 DIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
+ + N M + ++I LG
Sbjct: 673 AVTIATN--MAGRG-----------------------------TDILLG----------- 690
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYP-LGPTVALTY 513
G AEG Y +E V+ + M + + +K+ A+ L
Sbjct: 691 ------GNAEG---FYDSTLRKHAERVDYIREMPERNEDERAEKEEAIQEYLANMTEAEK 741
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
+L+ E+ C + + V+ LGGLH+IGT HESRRIDNQLRGRAGRQGDPGSTRF ++L
Sbjct: 742 QELLRQKELECEKDRARVRELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTRFFLAL 801
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
DE+ ++F+ D L+ R D+P+E R + Q E Y F +RK++VE+
Sbjct: 802 DDELMRRFAADRVSG--LMERAGMG-DLPLESKLFSRMIESAQSRVEGYNFDVRKNVVEY 858
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
D+V+ QR +Y R++IL + ++I + M+ V I+
Sbjct: 859 DDVIAQQRAVIYSDRRAILEHGD--MHERIVKMMEGEVARIVNA---------------- 900
Query: 694 LKEFIAIAGKILDDLFAGISGDTLLKSIE---ELPELNSIDINNFYFPDLPKPPNLFRGI 750
I G ++ + +TL K++E +PE DI LP+ N R
Sbjct: 901 -----CIPGNVISE---EEELETLFKTLEVWVNIPE----DI-------LPENINSVRRE 941
Query: 751 RRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEV 810
+ KS + L Y LR+ A L V Q YD ++E
Sbjct: 942 QLKSDLTELVLE----------HYEKRGEELRQQ------ARELGVPQ---YDP--LREF 980
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
ER L++ +D W DH+ ++ + + + +RS G R+PL E+K + R F + A + T
Sbjct: 981 ERTFLLQVVDRMWMDHIDALDVMRAGIGLRSLGQRDPLVEFKNESYRMFDELKVAIQHHT 1040
Query: 871 VESLVQ 876
V++L++
Sbjct: 1041 VDALLK 1046
>gi|210631231|ref|ZP_03296814.1| hypothetical protein COLSTE_00699 [Collinsella stercoris DSM 13279]
gi|210160118|gb|EEA91089.1| preprotein translocase, SecA subunit [Collinsella stercoris DSM
13279]
Length = 991
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 286/700 (40%), Positives = 401/700 (57%), Gaps = 85/700 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG LH+G IAEMKT VVTVNDYLA+RD+
Sbjct: 79 LRHFDVQLIGGMALHEGQIAEMKTGEGKTLVSTLAGYLNALSGKSVHVVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RF+GL+VGL+Q GM E+R+ Y CD+ Y NSE GFDYLRDN+ + Q V
Sbjct: 139 EWMGSIYRFMGLTVGLLQNGMPLTEKRAAYECDVIYGTNSEFGFDYLRDNMVLRAGQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R FAIVDEVDS+LIDE R PL+ISG +K + Y A+ L QG
Sbjct: 199 R---DHAFAIVDEVDSILIDEARTPLIISGAGTKSASTYKDFARAVRGLTQGEEAQFDML 255
Query: 152 -----------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKE 199
+ ++ +++ TE+G+ E L +D++ D + + ALKA+
Sbjct: 256 AAGEPVEATGDFVMDEAKHTIAATEQGLKKIEQRLGIDDIYSDLSGALVNHLQQALKAQY 315
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
+ RD QY+V NG+ I++E TGR+ E RR+SEG+HQA+EAKEG+ ++ ++ +A IT Q
Sbjct: 316 MFHRDKQYVVTNGEVKIVDEFTGRIMEGRRYSEGLHQAIEAKEGVLVREENQTLATITLQ 375
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F+LY KLSGMTGTA TE+ EF +++ +PV +PTN P RVD + T K+
Sbjct: 376 NYFRLYDKLSGMTGTAITEDAEFREIYNLPVQVIPTNRPVQRVDHDDLVYRTIDAKFNAV 435
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
E+E G+PVLVG+ S+E+SE LS LL ++GI H VLNA K+ REA+ VAQAGR
Sbjct: 436 ADEIEHRHAAGQPVLVGTVSIESSERLSRLLNKRGIKHEVLNA--KFHEREAQIVAQAGR 493
Query: 380 KYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSE 439
A+TI+TNMAGRGTDI+LGGN A+++ D L+ ++ EV D +VL E
Sbjct: 494 LGAVTIATNMAGRGTDILLGGN----AEEMTRDELMGYDF--GIDAEVLD-----RVLHE 542
Query: 440 IKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQ 499
+ +GK E + + +S F+ +E +++ ID
Sbjct: 543 ANW---------------RLLGKDETELEPVE--RSVFNRVLEGVRALG-------IDVD 578
Query: 500 SAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAG 559
+A + +A Y V+ C E V GGL VIGT HESRRIDNQLRGRAG
Sbjct: 579 TATF---AQIARAYEEVMAKTRAVCRAEHDRVVEAGGLTVIGTERHESRRIDNQLRGRAG 635
Query: 560 RQGDPGSTRFMVSLQDEMFQKFSFDTSWAV-DLISRITNDEDMPIEGDAIVRQLLGLQIS 618
RQGDPG T+F +SL+D++ + F D + +L+ +D PI+ I + + G Q
Sbjct: 636 RQGDPGETQFYLSLEDDLMRMFGGDRMDKISNLMVATEMGDDQPIQHKMISKAVEGAQRK 695
Query: 619 AEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANES 658
E F +RK+++E+D+V+ QR+ +Y R IL G + S
Sbjct: 696 VENINFSMRKNVLEYDDVMNKQRQVIYVERNKILDGKDLS 735
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 801 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
R + M+E+ V+++ +D W +L M+ L + +R FG R+PL EYK + R F
Sbjct: 810 RLGESLMQELNCQVMLRVIDTRWMGYLQEMDYLKQGIGLRGFGQRDPLVEYKTEAFRAF 868
>gi|88809925|ref|ZP_01125430.1| translocase [Synechococcus sp. WH 7805]
gi|88786115|gb|EAR17277.1| translocase [Synechococcus sp. WH 7805]
Length = 952
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/454 (53%), Positives = 303/454 (66%), Gaps = 37/454 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSFLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMTPAERRRNYGCDITYATNSELGFDYLRDNMAADINEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L +
Sbjct: 204 RQ---FQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVAAALTRAAEMGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE + DL+D DPWA ++ NALKAK+ + RDV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQMIGVADLYDPQDPWAHYITNALKAKDLFTRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALPIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D Q + T KW +E +
Sbjct: 381 RLAGMTGTAKTEETEFEKTYKLETTIVPTNRVRARQDWVDQVYKTEEAKWRAVAKETAEV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HQQGRPVLVGTTSVEKSELLSALLAEENIPHNLLNAKPENVEREAEIVAQAGRSGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR 420
TNMAGRGTDIILGGN +A+ + + LL L R
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLSRLVR 534
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 117/203 (57%), Gaps = 7/203 (3%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E V+ GGLHVIGT HESRR+DNQLRGRAGRQGDPGSTRF +SL D + + F
Sbjct: 650 VKQEEQRVREAGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGG 709
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D L++ +EDMPIE + R L G Q E YY+ IRK + E+DEV+ QRK
Sbjct: 710 DR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKA 767
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
VY R+ +L G +Q+ Y + ++EI+ V+P P W + +L ++EF+ +
Sbjct: 768 VYTERRRVLEG--RELKKQVIGYGERTMNEIVEAYVNPDLPPEEWDVTQLVSKVQEFVYL 825
Query: 701 AGKILDDLFAGISGDTLLKSIEE 723
+ D G+S + L ++E
Sbjct: 826 LDDLQPDQLQGLSMEELKAFLQE 848
>gi|148238477|ref|YP_001223864.1| preprotein translocase subunit SecA [Synechococcus sp. WH 7803]
gi|166918936|sp|A5GI02.1|SECA_SYNPW RecName: Full=Protein translocase subunit SecA
gi|147847016|emb|CAK22567.1| Preprotein translocase SecA subunit [Synechococcus sp. WH 7803]
Length = 955
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/454 (53%), Positives = 303/454 (66%), Gaps = 37/454 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 84 MRHFDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPSFLNALTGRGVHVVTVNDYLARRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VHRFLGLSVGLIQ+ M P ERR NY CDITY NSELGFDYLRDN+AA+ ++V
Sbjct: 144 EWMGQVHRFLGLSVGLIQQDMTPAERRRNYGCDITYATNSELGFDYLRDNMAADINEVVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L +
Sbjct: 204 R---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVAAALTRAAEMGKDGI 260
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQ 206
Y V+ K S LT+EG A AE + DL+D DPWA ++ NALKAK+ + RDV
Sbjct: 261 DPEGDYEVDEKQRSCTLTDEGFAKAEQMIGVADLYDPQDPWAHYITNALKAKDLFTRDVN 320
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP
Sbjct: 321 YIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALAIQPETQTLASITYQNFFLLYP 380
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
+L+GMTGTAKTEE EF K +++ VPTN R D Q + T KW +E +
Sbjct: 381 RLAGMTGTAKTEETEFEKTYKLETTIVPTNRVRARQDWVDQVYKTEEAKWRAVAKETAEV 440
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ GRPVLVG+TSVE SE LS LL ++ IPHN+LNA+P+ REAE VAQAGR A+TI+
Sbjct: 441 HQQGRPVLVGTTSVEKSELLSALLAEEDIPHNLLNAKPENVEREAEIVAQAGRSGAVTIA 500
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTR 420
TNMAGRGTDIILGGN +A+ + + LL L R
Sbjct: 501 TNMAGRGTDIILGGNSDYMARLKLREVLLSRLVR 534
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E V+ GGLHVIGT HESRR+DNQLRGRAGRQGDPGSTRF +SL D + + F
Sbjct: 650 VKQEEQRVREAGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTRFFLSLGDNLLRIFGG 709
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D L++ +EDMPIE + R L G Q E YY+ IRK + E+DEV+ QRK
Sbjct: 710 DR--VAGLMNAFRVEEDMPIESGMLTRSLEGAQKKVETYYYDIRKQVFEYDEVMNNQRKA 767
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
VY R+ +L G +Q+ Y + ++EI+ V+P P W + +L ++EF+ +
Sbjct: 768 VYSERRRVLEG--RELKKQVVGYGERTMNEIVEAYVNPDLPPEEWDVTQLVSKVQEFVYL 825
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
+ D G+S D L ++E N+ D+ D + P L R R
Sbjct: 826 LDDLQADQLQGLSMDELKAFLQEQLR-NAYDLKEGQIED--QRPGLMREAER 874
>gi|108759419|ref|YP_633495.1| preprotein translocase subunit SecA [Myxococcus xanthus DK 1622]
gi|123074103|sp|Q1D1H8.1|SECA_MYXXD RecName: Full=Protein translocase subunit SecA
gi|108463299|gb|ABF88484.1| preprotein translocase, SecA subunit [Myxococcus xanthus DK 1622]
Length = 940
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 275/678 (40%), Positives = 385/678 (56%), Gaps = 102/678 (15%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQLIGGMFLHEGCIAEMRTGEGKTLTATLPTYLNALSGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+RFLG++ G + + ++R+ YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 WMGRVYRFLGMTTGCVLHELNDKQRQEAYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG +Y +V LV YT++ K+
Sbjct: 202 ---ELNFAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGLVPDQDYTLDEKH 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L +L+D + V AL+A Y+RD Y+V++G+ +I+
Sbjct: 259 RSVSLTDDGIEKLQKRLGVGNLYDPGEIEMLHHVDQALRAHTLYKRDKDYVVKDGEVVIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQA+EAKEG+KI+ ++ +A +++Q+ F++Y KL+GMTGTA T
Sbjct: 319 DEFTGRQMPGRRWSDGLHQAIEAKEGVKIENENQTLATVSFQNYFRMYSKLAGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN P IR DL + T R K+E E+E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLDVRVIPTNRPPIRKDLQDVVYKTEREKFEAVAAEIEELHKNGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE ++ LK++GIPHNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVASFLKKRGIPHNVLNA--KQHQREADIVAQAGRKGAVTISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA 457
LGGN + +L + ++ + TS+P L L A A +A
Sbjct: 497 LGGNAE-------------VLAKASMGPPPEPPTSAPD--------GQPLDLTAYEAEVA 535
Query: 458 KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL 517
+W QK D ++ +
Sbjct: 536 ---------AWE-----------------------QKFADTKAKL--------------- 548
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
E E EV GGL +IGT HESRR+DNQLRGRAGRQGDPG +RF +SL+D++
Sbjct: 549 ---EEQTKKEREEVHTAGGLFIIGTERHESRRVDNQLRGRAGRQGDPGGSRFFLSLEDDL 605
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
+ F + L+ R+ +E IE + R + G Q E + F IRK+L+E+D+V+
Sbjct: 606 MRIFGSERIQG--LMERLGMEEGEVIEHVWLSRAIEGAQKRVEGHNFDIRKNLLEYDDVM 663
Query: 638 EVQRKHVYDLRQSILTGA 655
QR+ +Y LR+ +L
Sbjct: 664 NQQRRTIYKLRRQVLAAG 681
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
T+D W+DHL+ M+ L + +R +G ++P +EYK +G + FI MLSA + V L+
Sbjct: 800 TIDRLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGYQGFIQMLSAIKAQFVTQLMH 858
>gi|226356705|ref|YP_002786445.1| preprotein translocase subunit SecA [Deinococcus deserti VCD115]
gi|259494996|sp|C1CWX4.1|SECA_DEIDV RecName: Full=Protein translocase subunit SecA
gi|226318695|gb|ACO46691.1| putative Preprotein translocase secA subunit [Deinococcus deserti
VCD115]
Length = 869
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 314/905 (34%), Positives = 444/905 (49%), Gaps = 178/905 (19%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGGA LH G IAEM+T +VTVNDYLA+ E
Sbjct: 80 RHYDVQLIGGAALHQGRIAEMRTGEGKTLVATLALSLNALEGRGCHLVTVNDYLARVGME 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGL+VGL R M P E+++ Y CDITY NSELGFDYLRDN+A + E L MR
Sbjct: 140 EMGLLYRTLGLTVGLASREMQPHEKQAAYACDITYVTNSELGFDYLRDNMAQSREALAMR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P ++AIVDEVDS+LIDE R PL+ISG A K Y V AK+ L +G
Sbjct: 200 AEHPLNYAIVDEVDSILIDEARTPLIISGAAEKATDLYYVYAKLIRRLQKGEPAEPGVRA 259
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YT++ K V +TE GI+ E L DL+ EN A + A++AKE Y R+
Sbjct: 260 EPTGDYTIDEKGKQVHITEAGISKIERLLSIPDLYSPENMDKAHMITQAIRAKELYHREK 319
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YI+ +G+ +II+E TGR RR+ EG+HQA+EAKE +KI+ ++ +A ITYQ+ F+L
Sbjct: 320 DYIINADGEVIIIDEFTGRSMPGRRYGEGLHQAIEAKENVKIENENQTLATITYQNFFRL 379
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEFL ++ V+ +PTN +R D + T GK+ QEV
Sbjct: 380 YNKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNRTILRKDSEDLVYRTKMGKYAAVVQEVA 439
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
M GRPVL+G+ S+ SE LSDLL Q GI H+VLNA K+ A+EA VAQ
Sbjct: 440 EMHATGRPVLIGTASIVTSEQLSDLLTQAGIRHSVLNA--KFEAQEASIVAQ-------- 489
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGS 444
AGR + + N M + ++I LG
Sbjct: 490 -----AGRSGTVTIATN--MAGRG-----------------------------TDIMLGG 513
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQS-AMY 503
++ +L ++ + + G S EA++F K I +Q A
Sbjct: 514 NAEFILGES------IEQHLGISRFAPEAENFI----------------KAISRQDPAAE 551
Query: 504 PLG---PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
LG P + ++ + + + + V+ LGGLH+IGT HESRRIDNQLRGRAGR
Sbjct: 552 MLGMQIPGMTPEFIQQAQQLQADTVADRARVQELGGLHIIGTERHESRRIDNQLRGRAGR 611
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGS+RF VS +D++ + F+ D V ++ R+ D+ PIE + + Q E
Sbjct: 612 QGDPGSSRFYVSFEDDLMRLFAND--RVVAMMDRLGMDDSQPIEAKMVTGAIEKAQARVE 669
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
F RK L+EFD V+ QR +Y R+ +L G +E + + VD + +
Sbjct: 670 DRNFSTRKQLLEFDNVMSKQRDTIYAQRREVLLGPDEDVEESTEGMIADFVDMQLAIHAP 729
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ P W ++ L ++ +P+L D
Sbjct: 730 ADQSPDAWDIEGLQAAI-----------------------VDAVPQLEGFD--------- 757
Query: 741 PKPPNLFRGIRRKS--SSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ 798
F +R S + R L+ +D R+ LG ++ S
Sbjct: 758 ------FESLRHGSPAQAQDRLLSAVADAFDSR----------REELGSTMLNS------ 795
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
+ R VL++ +D W++HL M+ L + +R +G R+P EYK +
Sbjct: 796 -----------LARYVLLQVVDQHWKEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATNM 844
Query: 859 FISML 863
F M+
Sbjct: 845 FNEMI 849
>gi|224000249|ref|XP_002289797.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975005|gb|EED93334.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 927
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 286/709 (40%), Positives = 401/709 (56%), Gaps = 55/709 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG +LHDG +AEM T V+TVNDYLA+RD E
Sbjct: 82 RHYDVQLLGGLILHDGRLAEMATGEGKTLVSTLPCYINALTGKPSFVITVNDYLARRDME 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +VHR+LGLSVGLIQ GM EER+ Y CD+ Y N+ELGFDYLRD+LA + Q V+
Sbjct: 142 KMGQVHRYLGLSVGLIQAGMKEEERKKAYACDVVYVTNAELGFDYLRDHLALSPAQTVLP 201
Query: 99 W-PKPFH-FAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
F F +VDE DSVLIDE R PL+IS + +Y A +AE L +G+HYTV+L
Sbjct: 202 GNTGEFEGFCVVDEADSVLIDEARTPLIISKQVPAPANKYRAAQTLAENLKEGVHYTVDL 261
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE----NDPWARFVMNALKAKEFYRRDVQYIV--R 210
KN + L E G E AL L++E + WA F++NA+KAKE + RD++Y V
Sbjct: 262 KNKNCVLNERGYKDCEKALGVQSLFEEPADASGAWAPFILNAVKAKELFNRDIEYTVLPN 321
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
N II+ TGRV + RRWS+G+HQ++EAKEG+++ S V+A++TYQ+LF+ + +LSG
Sbjct: 322 NAGVGIIDSFTGRVLDGRRWSDGLHQSIEAKEGIEVSEQSKVIAKVTYQALFRQFTRLSG 381
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM---F 327
MTGTA ++ E + + V VPT LP R D P +F T +EV ++
Sbjct: 382 MTGTAMSDAAELEFTYGLKVTPVPTALPIARRDYPDVAFKTRDAGNRALVKEVVNVGGGT 441
Query: 328 RLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIST 387
GRP L+G+TSV SE + L +GI +LNA P+ AARE E VAQAGR +T++T
Sbjct: 442 PEGRPCLIGTTSVLQSEAIVKALADEGIKAELLNALPENAAREGEIVAQAGRPGVVTVAT 501
Query: 388 NMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-VLSEIKLGSSS 446
NMAGRGTDI+LGG P +A+ ++ R +L E SPK + +
Sbjct: 502 NMAGRGTDILLGGCPSTMAR--LKTRAVLFENGVLSEEERSFYPPSPKDEYYPCDVDEDT 559
Query: 447 LALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLG 506
L +L AA K + + + E + +++ E + + KL D
Sbjct: 560 LFMLKDAAAALKKEFGDDLTAIKFDEILTVATDTTEGEEDPGY--IVKLRD--------- 608
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
A + + K+ + E VK GGL+V+GT+ HES RID QLRGRAGRQGDPG+
Sbjct: 609 --AAQSVREIFKE---KLAPEKDVVKSRGGLYVMGTNRHESSRIDGQLRGRAGRQGDPGT 663
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
+RF +S +D+MF F D V R+++ DMP+E + L +Q++ E+ Y I
Sbjct: 664 SRFFLSFEDDMFVIFGGDGLQNVLKTFRVSD--DMPVEAPQVTDALDKVQLAVEEKYRDI 721
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
R + +FD VL QR+ Y RQ +L +E + + Y + V +I+
Sbjct: 722 RGQIFDFDNVLNDQRRIFYKRRQEMLASNSEDTLKIMDSYNKQTVADIV 770
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
++D W DHL NM L V +R + + +P +EYKI+ F +L R T+ SL Q
Sbjct: 857 SMDNAWSDHLQNMENLKENVFLRKYQNLDPADEYKIESLALFEGLLDKMRLNTIFSLWQS 916
Query: 878 WS 879
S
Sbjct: 917 LS 918
>gi|320334512|ref|YP_004171223.1| protein translocase subunit secA [Deinococcus maricopensis DSM
21211]
gi|319755801|gb|ADV67558.1| Protein translocase subunit secA [Deinococcus maricopensis DSM
21211]
Length = 867
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 287/730 (39%), Positives = 394/730 (53%), Gaps = 106/730 (14%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+D Q+IGGA LH G IAEM+T +VTVNDYLA+ AE
Sbjct: 80 RHYDTQLIGGAALHYGRIAEMRTGEGKTLVATLALALNALEAKGCHLVTVNDYLARVGAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGL+VGL R M P +R++ Y CDITY NSELGFDYLRDN+A + +QLV+R
Sbjct: 140 EMGLLYRTLGLTVGLAARDMQPHQRQAAYACDITYVTNSELGFDYLRDNMAQSPDQLVLR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P H+AIVDEVDS+LIDE R PL+ISG+A K +Y + AK+ + L +G
Sbjct: 200 ADHPLHYAIVDEVDSILIDEARTPLIISGQAEKATDQYFIFAKLVKRLQKGEPAEPGKRT 259
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YTV+ K+ V LTE+GI E L +DL+ E+ A + AL+AK+ Y RD
Sbjct: 260 EPTGDYTVDEKSKGVHLTEQGINRIEKLLSIDDLYSPEHMEKAHMITQALRAKDLYHRDT 319
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +II+E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 320 DYIVSAEGEVIIIDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRL 379
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEFL ++ V+ +PTNLP IR D + + GK+ EV
Sbjct: 380 YDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNLPVIRQDHDDLVYRSKMGKFGAVVNEVR 439
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
M GRPVL+G+ S+E SE LS +L GI H VLNA KY A EA VAQ
Sbjct: 440 EMHATGRPVLIGTVSIETSELLSRMLTAAGIKHQVLNA--KYEALEAAIVAQ-------- 489
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGS 444
AGR + + N M + ++I LG
Sbjct: 490 -----AGRSNTVTIATN--MAGRG-----------------------------TDIMLGG 513
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYP 504
++ L+ G F E+ E + K + + ++ + +
Sbjct: 514 NAEFLM--------------GDRLESMGVNRFAPEAEEFT-----KAIMRGDERAAELIK 554
Query: 505 LGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
P V +L+ + + + ++V+ LGGLH+IGT HESRRIDNQLRGRAGRQGDP
Sbjct: 555 ALPDVPANFLAEAQALRDQVNADRAKVRELGGLHIIGTERHESRRIDNQLRGRAGRQGDP 614
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
GS+RF VS +D++ + F+ D V ++ R+ D+ PIE + + Q E F
Sbjct: 615 GSSRFYVSFEDDLMRLFAND--RVVAMMDRLGMDDTQPIEAKMVTGAIERAQARVEDRNF 672
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL-K 683
RK L+EFD V+ QR+ +Y R+ +L GA+ + + M E+ G P+ +
Sbjct: 673 ATRKQLLEFDNVMSKQREIIYAQRREVLLGADADVEEST-EGMVGDFVELKLGEFAPIDE 731
Query: 684 HPRYWSLDKL 693
P W LD L
Sbjct: 732 EPEKWDLDGL 741
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+ + R VL++ +D +W++HL M+ L + +R +G R+P EYK + F M+
Sbjct: 792 LNSLSRYVLLQVVDQYWKEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATNMFNEMI 848
>gi|303285358|ref|XP_003061969.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226456380|gb|EEH53681.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 893
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/433 (55%), Positives = 301/433 (69%), Gaps = 39/433 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA+LHDG + EM T VVTVNDYLA+RDA
Sbjct: 55 MRHFDVQLVGGALLHDGCVCEMATGEGKTLTSTLPAYLNALTGEGVHVVTVNDYLARRDA 114
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVH+ LGL VG+IQ+ M EERR Y DITY N E+GFDYLRDN+A + +LVM
Sbjct: 115 EWMGRVHKALGLRVGVIQQDMDAEERRDAYDADITYVTNQEIGFDYLRDNMATEASELVM 174
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASK---DVARYPVAAKVAELLVQGLHYTV 154
R + +FAIVDEVDSVLIDEGRNPLLI+G A++ ++ +Y VA+ VA + +GL YTV
Sbjct: 175 R--RRVNFAIVDEVDSVLIDEGRNPLLITGPATEGDDEMRKYVVASGVAAQMREGLDYTV 232
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKA 214
+ K + +LTE G+ +AE L D+WD DPW R+V+ A+KAK Y RDVQYIVR G+
Sbjct: 233 DRKQKTADLTERGMMVAEQLLGVEDVWDTYDPWGRYVLLAVKAKALYLRDVQYIVREGQV 292
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGRV+ RRW++ IHQAVEAKEG++I+ ++ VA I+YQ LFKLY KLSGMTGT
Sbjct: 293 MIVDESTGRVQANRRWNDNIHQAVEAKEGVEIKRENTTVASISYQCLFKLYEKLSGMTGT 352
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE +E + + VI VPT+ P+ RVD P F TA +W V S GRPVL
Sbjct: 353 ASTEAEELYTTYGLNVITVPTHRPSKRVDKPHAMFRTAAARWNAVADLVVSCHWEGRPVL 412
Query: 335 VGSTSVENSEYLSDLLKQ-----------QGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
VG+TSVE+SEYLS LL + QG+PH +LNARP+ AAREAE VAQAGR++A+
Sbjct: 413 VGTTSVEHSEYLSSLLSEYRWRASDGRLVQGVPHKLLNARPQLAAREAEVVAQAGREHAV 472
Query: 384 TISTNMAGRGTDI 396
TI+TNMAGRGTDI
Sbjct: 473 TIATNMAGRGTDI 485
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 44/363 (12%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E V+ GGL VIGT+LH+SRRIDNQLRGRAGRQGDPGST F +S++DE+ +
Sbjct: 486 CDAEAVHVREKGGLQVIGTALHDSRRIDNQLRGRAGRQGDPGSTIFCLSMEDELMAIYC- 544
Query: 584 DTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
WA + + DEDMP+ + QL +Q + E ++ R S E D +++ QR
Sbjct: 545 -PGWASSSVWDWSGMDEDMPLYSSVVDNQLASIQANIEDFHASHRTSTYETDRIIDGQRD 603
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEII-FGNVDPLKHPRYWSLDKLLKEFIAIA 701
+Y++R+ +L + +++F+Y++ +VD+ VD L+ W D L IA
Sbjct: 604 AIYNVRRRVLLEGQQPLRERLFRYVEWIVDDACERAGVDGLRAIEDW--DTAL-----IA 656
Query: 702 GKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL 761
G + T L +E PE+ + + D+
Sbjct: 657 GD-------AMPLQTPLPGLEARPEVITAALQGVEIVDM--------------------- 688
Query: 762 AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESR-YDDVYMKEVERAVLVKTLD 820
+ LT + T R+ + + + S+ YD ++ VER +++ +D
Sbjct: 689 ----NPLTNPAKVTDTEPEAREEEVAARVERRMEFARLSQNYDRADLESVERVWVLRAID 744
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSS 880
W+ HL+ M L ++VNVR+FG +P+EEY+IDG R F+ M+ RR T+ + + S
Sbjct: 745 ERWQRHLVEMQVLRNSVNVRAFGQLDPMEEYRIDGARSFVDMVRDMRRKTLAHVFFFVGS 804
Query: 881 PME 883
+E
Sbjct: 805 AVE 807
>gi|261366465|ref|ZP_05979348.1| preprotein translocase, SecA subunit [Subdoligranulum variabile DSM
15176]
gi|282571733|gb|EFB77268.1| preprotein translocase, SecA subunit [Subdoligranulum variabile DSM
15176]
Length = 956
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 275/717 (38%), Positives = 399/717 (55%), Gaps = 90/717 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
++ + VQIIGG VLH IAEM+T VVTVNDYLA+RD+
Sbjct: 79 LKPYPVQIIGGIVLHRACIAEMQTGEGKTLVATMPVYLNALTGKGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGL+ + P +R+ Y D+TY N+E GFDYLRDN+ +V
Sbjct: 139 EWMGKVYRFLGLTVGLVVHSVAPADRKKAYEADVTYGTNNEFGFDYLRDNMVVYKANMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R +AIVDEVDS+LIDE R PL+ISG+ A Y A A+ L + +
Sbjct: 199 RG---HAYAIVDEVDSILIDEARTPLIISGKGEDSSAMYKRADDFAKTLKKSVIVELDDK 255
Query: 151 ---------HYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWAR-FVMNALKAKEF 200
Y V+ K + LTE G+ AE +L D ++ R ++ A+KA+
Sbjct: 256 VAAEEQVDGDYVVDEKRKTATLTESGVQKAEAYFGVENLADADNMALRHYIDGAIKARGV 315
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
RD YIV++G+ +I++E TGR+ RR+++G+HQA+EAKEG+ + A+S +A +T+Q+
Sbjct: 316 MHRDTDYIVKDGEVIIVDEFTGRLMYGRRFNDGLHQAIEAKEGVNVAAESKTLATVTFQN 375
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA TE EF +++ + ++ +PTN P R DLP + T GK+
Sbjct: 376 YFRMYDKLAGMTGTASTEADEFSEIYGLQIVTIPTNKPRARKDLPDSVYKTVNGKYNAVI 435
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++V G+PVLVG+ SVE SE LS LLK++GI HNVLNA K REAE VAQAG++
Sbjct: 436 EQVAECHAKGQPVLVGTVSVEKSEALSKLLKKRGIEHNVLNA--KQHEREAEIVAQAGKQ 493
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDD----KTSSPKV 436
A+TI+TNMAGRGTDI+LGGN +AK ++ L LT++ L+ D+ K +
Sbjct: 494 GAVTIATNMAGRGTDIMLGGNVTYMAKAALKKELTKELTKD-LDQRKDEYEHAKARAKAT 552
Query: 437 LSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLI 496
+E+ + LL + G A+ + A+ F E
Sbjct: 553 GTELPTPPEADIDAKLEMLLTECDGHADTEDAEILAARKRFDE----------------- 595
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
+ + E E V+ GGL +IGT HESRRIDNQLRG
Sbjct: 596 -------------------LCAEFEPEVKREAEAVREAGGLFIIGTERHESRRIDNQLRG 636
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGDPG++RF +SL+D++ + F + +L+ + +ED+PIE I + Q
Sbjct: 637 RAGRQGDPGASRFFLSLEDDLMRIFGGER--VQNLMDTLGLEEDVPIENKLITNTIESAQ 694
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDE 673
E F IRK ++++D+V+ QR+ +Y RQ +L G E S ++ + M+ +D+
Sbjct: 695 KKLEASNFAIRKQVLQYDDVMNQQREIIYKQRQMVLNG--EDISDKLHEMMRQSIDD 749
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 747 FRGIRRKSSSLKRWLAICSD---------DLTKNGRYRATTNLLRKYLGDILIASYLNVV 797
F G+RR WL + +D D+T+ G + L K DIL A
Sbjct: 765 FAGLRR---HFMNWLCLPTDFNYTTEQLNDVTREG----IADELYKRGMDILTA------ 811
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E++Y M+E+ER L++ +D W +H+ NM++L + +R +G +P+ EY+I+G
Sbjct: 812 KEAKYGAPTMRELERICLLRNVDSKWMEHIDNMDQLKQGMGLRGYGQHDPVVEYRIEGFA 871
Query: 858 FFISMLSATRRLTVESLV 875
F M+++ R V L+
Sbjct: 872 MFDEMIASIREDAVHMLL 889
>gi|420157372|ref|ZP_14664208.1| preprotein translocase, SecA subunit [Clostridium sp. MSTE9]
gi|394756287|gb|EJF39392.1| preprotein translocase, SecA subunit [Clostridium sp. MSTE9]
Length = 914
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 279/713 (39%), Positives = 401/713 (56%), Gaps = 122/713 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQIIGG VLH G I+EMKT VVTVNDYLA+RD+
Sbjct: 79 MRHFPVQIIGGIVLHQGRISEMKTGEGKTLVATLPAYLNALSGKGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGLI M ++R++ Y DITY N+E+GFDYLRDN+ E V
Sbjct: 139 EWMGKVYRFLGLTVGLIVHDMDNDQRKAAYEADITYGTNNEMGFDYLRDNMVIYKENKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA---------AKVAEL--- 145
R ++AIVDEVDS+LIDE R PL+ISG+ K Y +A +VAE+
Sbjct: 199 RG---HNYAIVDEVDSILIDEARTPLIISGQGDKSTELYGLADRLAKQLKMVRVAEVDEK 255
Query: 146 -----LVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKE 199
L + Y V K + LT G+ AE + +L D EN V A+KA
Sbjct: 256 EDNDELYKEYDYVVNEKLKTASLTPNGVKKAEKYFQIENLTDPENLTIQHHVNQAIKANG 315
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
R D+ Y+V++G+ +I++E TGR+ RR++EG+HQA+EAKEG+++ +S +A IT+Q
Sbjct: 316 VMRNDIDYVVKDGEVIIVDEFTGRLMYGRRYNEGLHQAIEAKEGVEVARESKTLATITFQ 375
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F+LY KLSGMTGTA TEE+EF +++++ VIE+PTN P R DLP + T + K+E
Sbjct: 376 NYFRLYSKLSGMTGTAMTEEEEFREIYKLDVIEIPTNRPLAREDLPDVVYKTEKAKFEAV 435
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
++VE ++ G+PVLVG+ S+E SE LS +L ++G+ H VLNA KY +EAE VAQAG+
Sbjct: 436 IEDVEEHYKKGQPVLVGTISIEKSEILSAMLGRRGVKHEVLNA--KYHEKEAEIVAQAGK 493
Query: 380 KYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSE 439
K A+TI+TNMAGRG ++
Sbjct: 494 KGAVTIATNMAGRG--------------------------------------------TD 509
Query: 440 IKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQ 499
I LG + A+Y+ K+E + + E SES S + + + L+
Sbjct: 510 IMLGGN-----------AEYMAKSEMRRMGFSE--ELISESTAYSDTQDPEILE------ 550
Query: 500 SAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAG 559
T++ + + + EV+ +GGL++IGT HESRRIDNQLRGRAG
Sbjct: 551 ---------ARKTFVELNEKYKEQVRPIAEEVRSVGGLYIIGTERHESRRIDNQLRGRAG 601
Query: 560 RQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA 619
RQGDPG +RF +SL+D++ + F + +L+ + +EDMPIE + + + Q
Sbjct: 602 RQGDPGKSRFYISLEDDLMRLFGGER--ISNLMDSLKVEEDMPIEAGMLSKTIESAQRKV 659
Query: 620 EKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD 672
E FGIRK+++++D+V+ QR+ +Y R +L G E+ QI ++ +D
Sbjct: 660 EGRNFGIRKNVLQYDDVMNRQREVIYKQRDQVLNG--ENIRGQIITMIEQAID 710
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER +L+K +D W DH+ M L + +R++ R+P+ EY+++G F +M++
Sbjct: 784 VRELERVILLKNVDTLWMDHIDAMEELQRGIRLRAYAQRDPVVEYRMEGYDMFDAMIAQI 843
Query: 867 RRLTVESLV 875
R T ++
Sbjct: 844 RENTARMML 852
>gi|337287694|ref|YP_004627166.1| Protein translocase subunit secA [Thermodesulfobacterium sp. OPB45]
gi|334901432|gb|AEH22238.1| Protein translocase subunit secA [Thermodesulfobacterium geofontis
OPF15]
Length = 923
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 315/908 (34%), Positives = 476/908 (52%), Gaps = 182/908 (20%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VLH+G IAEMKT +VTVNDYLA+RDA
Sbjct: 81 MRHFDVQIMGGIVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHIVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RFLGL+VG +Q M ER+ Y CDITY NSE GFDYLRDN+ + E +V
Sbjct: 141 EWMGPIYRFLGLTVGYLQNQMSDSERKKAYACDITYGTNSEFGFDYLRDNMKYSLEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISG + + Y ++ L + +H+TV+ K
Sbjct: 201 RG---HYYAIIDEVDSILIDEARTPLIISGPSEESTDLYYYIDEIVRKLKKDIHFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN---ALKAKEFYRRDVQYIVRNGKA 214
+ LTEEGIA E L +L+ N + R + + AL+A ++RDV Y+V++GK
Sbjct: 258 TKNAFLTEEGIAECERLLGIKNLY--NPRYVRLIHHINQALRAHHLFKRDVDYVVKDGKV 315
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGR+ RRWS+G+HQA+EAKE L+I+A++ +A IT Q+ F++Y KL+GMTGT
Sbjct: 316 IIVDEFTGRLMPGRRWSDGLHQAIEAKERLRIEAENQTLAMITIQNYFRMYEKLAGMTGT 375
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A+TE EF +++ + V+ +PT+ P IR+D P F T + K+E +E+E ++ GRPVL
Sbjct: 376 AETEAAEFKEIYNLDVVVIPTHKPMIRIDYPDVVFRTQKEKFEKVVEEIEKCYKEGRPVL 435
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+TS+E +E LS +LK++ IPH VLNA K+ +EA+ +AQ AGR
Sbjct: 436 VGTTSIEKNELLSKMLKKRKIPHQVLNA--KHHEKEAQIIAQ-------------AGRSH 480
Query: 395 DIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
+ + N M + + +I LG + L AKA
Sbjct: 481 TVTIATN--MAGRGV-----------------------------DIILGGNPEGL-AKAQ 508
Query: 455 LLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALT-- 512
L +AEG + + +++ +E + M++ L PT
Sbjct: 509 L------EAEGYDLSEIDERAW-NEVLAMARQ-----------------GLDPTTKYKDY 544
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ VL + + C + +VK LGGL++IGT HESRRIDNQLRGRAGRQGDPG++RF +S
Sbjct: 545 WAKVLYEKYLECQKDAEKVKALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGASRFFLS 604
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + + ++ E P+E + + + Q E Y+F IRK L+E
Sbjct: 605 LEDDLLRLFG--SEKLKTFMEKLGLPEGEPLEHPWLSKAIEQAQKKVEAYHFEIRKYLLE 662
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ IL ++S I ++ +EI+ KH +L+
Sbjct: 663 YDDVMNKQRETIYSQRKEIL--KSDSIKDWIISMIEEKCEEIVEEAFIENKHFEKENLET 720
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
LL+ F ++FA PE ID+N K +L + +
Sbjct: 721 LLQRF--------KEIFAFS------------PE---IDVN------FSKKEDLVKEL-- 749
Query: 753 KSSSLKRW----LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMK 808
K+S+LKR+ I S+ L +Y T + D L +L ++
Sbjct: 750 KNSALKRYEEKEKIIGSETLRGLEKYFLLTTI------DTLWKEHLLML----------- 792
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
DHL + +R +G +NPL+EYK + F+ ++ +
Sbjct: 793 ----------------DHL------KESTGLRGYGQKNPLQEYKKEAFYLFVDLMKRIKE 830
Query: 869 LTVESLVQ 876
+T+ L +
Sbjct: 831 ITLSYLFR 838
>gi|291543936|emb|CBL17045.1| protein translocase subunit secA [Ruminococcus champanellensis
18P13]
Length = 913
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 306/922 (33%), Positives = 470/922 (50%), Gaps = 197/922 (21%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F VQ+IG VLH G IAEMKT V+TVNDYLA+ +E
Sbjct: 80 RPFPVQLIGATVLHQGRIAEMKTGEGKTLVACVASYLNALSGEGVHVITVNDYLAKTQSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +VHRF+GL+VG I G+ ++RR Y CD+TY N+ELGFDYLRDN+ + V R
Sbjct: 140 EMGKVHRFMGLTVGCILHGLNNDQRREAYNCDVTYGTNNELGFDYLRDNMVIYKKDKVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV----------- 147
+FAIVDEVDS+LIDE R PL+ISG K Y V K A+ L
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGRGDKSTELYTVVDKFAKTLTATTVVEMDDKL 256
Query: 148 ------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
+ Y ++ K + +T G+ AE +L D +N + ALKA
Sbjct: 257 DQDEANEEADYIIDEKAKTATITRRGVRKAEKYFNVENLMDPDNMTLLHHINQALKANGI 316
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
D+ Y+V++G+ +I++E TGR+ RR+++G+HQA+EAKEG+KI +S +A IT+Q+
Sbjct: 317 MHADIDYVVKDGEVIIVDEFTGRLMLGRRFNDGLHQAIEAKEGVKIANESKTLATITFQN 376
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F+LY KLSGMTGTA TEE EF +++++ VI +PTN P R+D + + T +GK+E
Sbjct: 377 YFRLYNKLSGMTGTAMTEEDEFKEIYKLDVIAIPTNKPVQRIDHEDRIYRTEKGKFEAII 436
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
+V G+PVLVG+ S+E SE LS +L ++GI HNVLNA K AREAE VAQAG+
Sbjct: 437 DQVCECHAKGQPVLVGTISIEKSELLSRMLTRKGIKHNVLNA--KQHAREAEIVAQAGKL 494
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+TI+TNMAGRG ++I
Sbjct: 495 GAVTIATNMAGRG--------------------------------------------TDI 510
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKEL------QK 494
LG + A+++ KAE + Y++ +E+V + + N + L ++
Sbjct: 511 MLGGN-----------AEFLAKAEMRKQGYED--DIINEAVGYADTENEQILAARAVYKE 557
Query: 495 LIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
L DK SA + EVK+ GGL+++GT HESRRIDNQL
Sbjct: 558 LYDKFSA---------------------EVKEKAVEVKKAGGLYILGTERHESRRIDNQL 596
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGR+GRQGD G + F +S++D++ + F+ + +++ + +E+MPIE + + +
Sbjct: 597 RGRSGRQGDEGESCFFLSVEDDLMRIFAGERLE--NMMRTLNVEENMPIESRMLTKIIES 654
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E F IRK+++ +D+V+ QR+ +Y+ R ++L G + I +Y+ +++E+
Sbjct: 655 SQKKVEGRNFAIRKNVLNYDDVMNKQREIIYEQRATVLNGDD------IHEYILKMMEEL 708
Query: 675 IFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINN 734
I VD + +D KE + G L D F G
Sbjct: 709 IDSTVDQ------YLIDDDNKEDWNLVG--LRDHFMG----------------------- 737
Query: 735 FYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRA-TTNLLRKYLGDILIASY 793
W+ + D + Y + T + ++K+L + + +Y
Sbjct: 738 -------------------------WITVDGDLEYEGEEYESITKDEIKKFLTERTLKAY 772
Query: 794 LNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
+ +E+ Y ++E+ER +L+K +D W H+ +M+ L + +R+ G++NP+ EY+
Sbjct: 773 AD--REAHYGAETLRELERVILLKVVDTKWMAHIDDMDELKRGIGLRAMGNKNPVVEYRF 830
Query: 854 DGCRFFISMLSATRRLTVESLV 875
+G F +M+ + R TV L+
Sbjct: 831 EGMDMFDAMIDSIREDTVRLLL 852
>gi|408791285|ref|ZP_11202895.1| preprotein translocase, SecA subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408462695|gb|EKJ86420.1| preprotein translocase, SecA subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 918
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 287/726 (39%), Positives = 405/726 (55%), Gaps = 106/726 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G+I+EMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMMGGISLHWGNISEMKTGEGKTLTSTLPIYLNALSDEGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM V FL +SVG+IQ M EER+ Y DITY N+E GFDYLRDN+ + E V
Sbjct: 141 NWMRPVFEFLKVSVGVIQHDMDHEERKIAYNSDITYGTNNEFGFDYLRDNMVSYKEHRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG A + +Y K+ L++G Y ++ K
Sbjct: 201 R---QHNFAIVDEVDSILIDEARTPLIISGPAEESTDKYIKVDKIIPKLIEGEDYEIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V L+E G+ E L +L+ EN V ALKA + + +D Y+V+ G+ +I
Sbjct: 258 AKNVILSEAGVHHVEELLGVENLYHAENIELVHHVQQALKAHKIFYKDKDYVVQGGEVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ + RR+S+G+HQ++EAKEG+ I +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMKGRRYSDGLHQSLEAKEGVAIARESQTLASITFQNYFRIYKKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + VI +P+NL R+D+ + + T R K++ ++++ +PVLVG
Sbjct: 378 TEAEEFKKIYNLDVIVIPSNLKIQRLDMADRVYKTEREKFDAVVKDIQEKVSKKQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LL GIPHNVLNA K RE+E VA AGR AITI+TNMAGRGTDI
Sbjct: 438 TISIEKSEVLSKLLTSHGIPHNVLNA--KQHERESEIVANAGRPGAITIATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
+LGG PK +E L ++DD S SL + AK+ L
Sbjct: 496 VLGGAPKY---------------KEDLE-KLDDL-------------SDSLGIKAKSELE 526
Query: 457 AKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSV 516
Y + ++EA++ SE ++ N+K+ I ++ + + +
Sbjct: 527 VIYSFREHLIKQKFEEAEAKTSE----IKNENIKKECNKILTEAKKWKVDHDFVIG---- 578
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
GGLH+IG+ HESRRIDNQLRGR+GRQGDPGS+RF +SLQD+
Sbjct: 579 -----------------AGGLHIIGSERHESRRIDNQLRGRSGRQGDPGSSRFYLSLQDD 621
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMP----IEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
+ + F D I+RI + MP +E + + Q E + F IRK L+E
Sbjct: 622 LMRIF------GSDRIARIMDTLKMPEGQELEHSMVSNAIARAQKRVEGHNFDIRKHLLE 675
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF-----GNVDPLKHPRY 687
+D+V+ QR ++Y +R +L N S+ I + VV+ + NVD
Sbjct: 676 YDDVMNRQRIYIYGIRNELLDKGN--MSRTIVDFFDEVVENQVILYCEGNNVDA------ 727
Query: 688 WSLDKL 693
W +D L
Sbjct: 728 WEVDSL 733
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 803 DDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+DV+ + +ER V + LD W++HL M+ L + +G +NPL EYK+ G + F +
Sbjct: 782 EDVW-RSIERNVFLDILDHRWKEHLYAMDHLKEGIWTVGYGEKNPLIEYKLQGFKMFDQL 840
Query: 863 LSATRRLTVESLVQ 876
+ + V L++
Sbjct: 841 VENLKNEVVSFLLK 854
>gi|445063159|ref|ZP_21375409.1| Preprotein translocase subunit SecA [Brachyspira hampsonii 30599]
gi|444505461|gb|ELV05973.1| Preprotein translocase subunit SecA [Brachyspira hampsonii 30599]
Length = 980
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 286/736 (38%), Positives = 416/736 (56%), Gaps = 87/736 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQVMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMTPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVTRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+FAIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYFAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAEVDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y ++ K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLDEKDKNVYLTEEGVHKVEKLLNVENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
+DV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 KDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDKIYRTKKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+P LVG+ SVE +E LS + K+ I H VLNA K +REA+ +AQAG A
Sbjct: 459 IKELQDAGKPALVGTVSVEMNEELSKVFKRHKINHEVLNA--KNHSREAQIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKL 442
+T++TNMAGRGTDI+LGGNP +AK + E +L+L R+ K P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--VAKGVAEIEQILVLMRDKAF-----KDRDPYKKEELTK 569
Query: 443 GSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAM 502
++ L +A + + GK E+ E++Q N E+ + ID+
Sbjct: 570 KVKAIDLYKEAFVRSVIAGK--------------IDEAKELAQKNNADEMIEKIDR---- 611
Query: 503 YPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
+ + S + +V + GGLHVIG+ HE+RRIDNQLRGR+GRQG
Sbjct: 612 -----IIQINEKSKIDKEKVLAA---------GGLHVIGSERHEARRIDNQLRGRSGRQG 657
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPG + F +SL+D++ + F + + L + +E++ + + + + Q E
Sbjct: 658 DPGLSVFFLSLEDDLMRLFGGERVSRMMLAMGMGEEEELGHKW--LNKSIENAQRKVEGR 715
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
F IRK L+E+D+V+ QR VY R IL ++ S ++ + + V +E I D
Sbjct: 716 NFDIRKHLLEYDDVMNQQRMAVYGERDYILY--SDDISPRVEEIISEVTEETIKDISDNK 773
Query: 683 KHPRYWSLDKLLKEFI 698
KH + K L ++
Sbjct: 774 KHVDPLEVTKWLNSYL 789
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 759 RWLA---ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVL 815
+WL I D+ N + K L ++L+ +Y E ++ +EVE+ +
Sbjct: 783 KWLNSYLIAIDEDAANKAVEGGVDNAVKNLTNLLLEAYRKKSLE--VNEKIFREVEKNIF 840
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W+DHL M+ L + +R + +NPL EYK++G + F++ ++A
Sbjct: 841 LSIIDNRWKDHLFAMDSLREGIGLRGYAEKNPLTEYKLEGYKMFVATMNA 890
>gi|332652528|ref|ZP_08418273.1| preprotein translocase, SecA subunit [Ruminococcaceae bacterium
D16]
gi|332517674|gb|EGJ47277.1| preprotein translocase, SecA subunit [Ruminococcaceae bacterium
D16]
Length = 918
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/724 (37%), Positives = 405/724 (55%), Gaps = 121/724 (16%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQ+IGG +LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MRPYRVQLIGGIILHQGRIAEMKTGEGKTLVATLPAYLNALAGKGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RF+GL+VGL+ G++ +++++ Y DITY N+E GFDYLRDN+A S++LV
Sbjct: 139 EWMGKVYRFMGLTVGLVIHGVMGQDKKAAYDADITYGTNNEFGFDYLRDNMAIYSQELVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK-VAELLVQGL------ 150
R +FAIVDEVDS+LIDE R PL+ISG+ K Y V + V++L Q +
Sbjct: 199 RG---HYFAIVDEVDSILIDEARTPLIISGQGEKSTQLYTVVDQFVSKLTCQRIAKVDDK 255
Query: 151 ---------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
Y V+ K + LT GI AE A +L D EN + + A+KA+
Sbjct: 256 EEEDVNIDADYIVDEKARTATLTARGIKKAEEAFNIENLADPENTTLSHHINQAIKARGV 315
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+RD+ Y+V++G+ +I++E TGR+ RR++EG+HQA+EAKE +++ +S +A IT+Q+
Sbjct: 316 MKRDIDYVVKDGQVIIVDEFTGRLMFGRRYNEGLHQAIEAKEHVEVANESKTLATITFQN 375
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F+LY KLSGMTGTA TEE+EF ++++ ++E+PTN P RVD + T GK
Sbjct: 376 YFRLYDKLSGMTGTAMTEEEEFGTIYELDIVEIPTNKPVQRVDHHDVVYKTEAGKLRAVV 435
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++E G+PVLVG+ S+E SE LSD+LK++GI HNVLNA K +EAE VAQAG+
Sbjct: 436 SQIEECHEKGQPVLVGTVSIEKSEELSDMLKRRGIKHNVLNA--KNHEKEAEIVAQAGKL 493
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+T++TNMAGRGTDI+LGGN + LAK +++
Sbjct: 494 GAVTVATNMAGRGTDIMLGGNAEYLAK------------------------------ADL 523
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQS 500
+ S L+A+A G AE + +A+ F+++ E +KE + + +
Sbjct: 524 RKAGMSDELIAEA------TGYAETDNQEILDARKMFADA-EAKYKDEIKEEAEKVREVG 576
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
++ LG T HESRRIDNQLRGRAGR
Sbjct: 577 GLFILG-----------------------------------TERHESRRIDNQLRGRAGR 601
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG +RF +SL+D++ + F + + ++ ++ DED PIE + + Q E
Sbjct: 602 QGDPGESRFYLSLEDDIMRLFG--SERVMGMMEKLGVDEDTPIEQKMLSNAIENAQKQVE 659
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
F RK+++++D+V+ QR+ +Y R+ +L G E I + +V+ I G++
Sbjct: 660 SRNFQTRKNVLQYDDVMNTQREVIYKQRRQVLDG--EDLQGSIQNMIHTMVENAIQGHMG 717
Query: 681 PLKH 684
KH
Sbjct: 718 EQKH 721
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER ++++ +D +W D + +MN L + +R++ +P+ YK +G F M++A
Sbjct: 783 MRELERVLMLRVVDEYWMDQIDSMNDLKQGIGLRAYAQTDPVVAYKKEGYEMFEQMVAAI 842
Query: 867 RRLT 870
+ T
Sbjct: 843 QEET 846
>gi|429125245|ref|ZP_19185777.1| Preprotein translocase subunit SecA [Brachyspira hampsonii 30446]
gi|426278799|gb|EKV55829.1| Preprotein translocase subunit SecA [Brachyspira hampsonii 30446]
Length = 980
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 285/742 (38%), Positives = 421/742 (56%), Gaps = 99/742 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQVMGGTVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMTPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVTRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+FAIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYFAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAEVDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y ++ K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLDEKDKNVYLTEEGVHKVEKLLNVENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
+DV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 KDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTKKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+P LVG+ SVE +E LS + K+ I H VLNA K +REA+ +AQAG A
Sbjct: 459 IKELQEAGKPALVGTVSVEMNEELSKVFKRHKINHEVLNA--KNHSREAQIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIE-DRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
+T++TNMAGRGTDI+LGGNP +AK + E +++L+L+ +A K P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--VAKGVAEIEQILVLMKDKAF------KERDPYKKEELT 568
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSA 501
++ L +A + + GK E+ E+++ N E+ + ID+
Sbjct: 569 KKVKAIDLYKEAFVRSVIAGK--------------IDEAKELAEKNNASEMIEKIDR--- 611
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKR-----LGGLHVIGTSLHESRRIDNQLRG 556
+T++ NE S++ + GGLHVIG+ HE+RRIDNQLRG
Sbjct: 612 ---------ITHI-----------NEKSKIDKEKVLAAGGLHVIGSERHEARRIDNQLRG 651
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
R+GRQGDPG + F +SL+D++ + F + + L + +E++ + + + + Q
Sbjct: 652 RSGRQGDPGLSVFFLSLEDDLMRLFGGERVAKMMLAMGMGEEEELGHK--WLNKSIENAQ 709
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E F IRK L+E+D+V+ QR VY R IL ++ S ++ + + V ++ I
Sbjct: 710 RKVEGRNFDIRKHLLEYDDVMNQQRMAVYGERDYILY--SDDISPRVEEIISEVTEDTIK 767
Query: 677 GNVDPLKHPRYWSLDKLLKEFI 698
D KH + K L ++
Sbjct: 768 DISDNKKHVDPLEVTKWLNSYL 789
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
K L ++L+ +Y + S D+ +EVE+ + + +D W+DHL M+ L + +R +
Sbjct: 810 KNLTNLLLEAYHK--KASEVDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGY 867
Query: 843 GHRNPLEEYKIDGCRFFISMLS 864
RNPL EYK++G + F++ ++
Sbjct: 868 AERNPLTEYKLEGYKMFVATMN 889
>gi|225619812|ref|YP_002721069.1| preprotein translocase subunit SecA [Brachyspira hyodysenteriae
WA1]
gi|254767902|sp|C0QZS7.1|SECA_BRAHW RecName: Full=Protein translocase subunit SecA
gi|189031317|gb|ACD74829.1| putative preprotein translocase SecA subunit [Brachyspira
hyodysenteriae WA1]
gi|225214631|gb|ACN83365.1| preprotein translocase, SecA subunit [Brachyspira hyodysenteriae
WA1]
Length = 980
Score = 457 bits (1177), Expect = e-125, Method: Compositional matrix adjust.
Identities = 284/713 (39%), Positives = 409/713 (57%), Gaps = 87/713 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQVMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMTPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVTRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+FAIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYFAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAEVDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y ++ K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLDEKDKNVYLTEEGVHKVEKLLNVENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
+DV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 KDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+P LVG+ SVE +E LS + K+ I H VLNA K +REA +AQAG A
Sbjct: 459 IKELQDAGKPALVGTVSVEMNEELSKVFKRHKINHEVLNA--KNHSREAAIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKL 442
+T++TNMAGRGTDI+LGGNP +AK + E +L+L R+ E D P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--VAKGVAEIEQILVLMRDKAFKERD-----PYKKEELTK 569
Query: 443 GSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAM 502
S+ L +A + + GK E E+ E++Q N E+ + ID+
Sbjct: 570 KIKSIDLYKEAFVRSVISGKIE--------------EAKELAQKNNADEMIEKIDR---- 611
Query: 503 YPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 562
+ + + +V + V GGLHVIG+ HE+RRIDNQLRGR+GRQG
Sbjct: 612 ----------IIQINEKAKV----DKERVLAAGGLHVIGSERHEARRIDNQLRGRSGRQG 657
Query: 563 DPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKY 622
DPG + F +SL+D++ + F + + L + +E++ + + + + Q E
Sbjct: 658 DPGLSVFFLSLEDDLMRLFGGERVSKMMLAMGMGEEEELGHK--WLNKSIENAQRKVEGR 715
Query: 623 YFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
F IRK L+E+D+V+ QR VY R IL ++ S ++ + + V +E I
Sbjct: 716 NFDIRKHLLEYDDVMNQQRMAVYGERDYILY--SDDISPRVEEIISEVTEETI 766
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
K L ++L+ +Y + S D+ +EVE+ + + +D W+DHL M+ L + +R +
Sbjct: 810 KNLTNLLLEAYRK--KASEIDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGY 867
Query: 843 GHRNPLEEYKIDGCRFFISMLS 864
+NPL EYK++G + F++ ++
Sbjct: 868 AEKNPLTEYKLEGYKMFMATMN 889
>gi|300087339|ref|YP_003757861.1| preprotein translocase subunit SecA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527072|gb|ADJ25540.1| preprotein translocase, SecA subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 1072
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 332/971 (34%), Positives = 473/971 (48%), Gaps = 187/971 (19%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG +LH+G IAEMKT +VT NDYLA+RDA
Sbjct: 116 LRHYDVQMMGGVILHEGRIAEMKTGEGKTLVATLPLYLNSLLGRGAHLVTQNDYLARRDA 175
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEE---------------------------RRSNYRCD 70
WM V+ LG++V I P+E R+ Y D
Sbjct: 176 YWMGPVYDALGVTVASIYPMQTPDEPQPSRIYDPSYNSGGDNDPWQHYRPVSRQEAYAAD 235
Query: 71 ITYTNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEAS 130
ITY ++E GFDYLRDN+ + V R PF FAIVDEVD++LIDE R PL+IS
Sbjct: 236 ITYGTSAEFGFDYLRDNMVLDLRNAVQRTDGPF-FAIVDEVDNLLIDEARTPLIISAPDV 294
Query: 131 KDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEG------IALAEMALETNDLWDEN 184
+ Y AKV L G Y + K ELTEEG + E L+ + ++D
Sbjct: 295 EAGRLYESFAKVVTRLRSGEDYEPKAKERQAELTEEGWIKFENLVRREGLLKADSVYDPQ 354
Query: 185 DPW-ARFVMNALKAKEFYRRDVQYIVR----NGKALII-NELTGRVEEKRRWSEGIHQAV 238
+ + R + NAL AKEFY RD QY+V G+ ++I +E TGR RR+SEG+HQA+
Sbjct: 355 NAFLIRHLRNALAAKEFYHRDRQYVVDRDPDGGRGIVIVDEFTGRKMVGRRYSEGLHQAI 414
Query: 239 EAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLP 298
EAKEG+KI+ ++ A IT Q+ F++Y KL GMTGTA TE +EF +++ + V+ VPTN P
Sbjct: 415 EAKEGVKIRQETKTYASITIQNYFRMYDKLCGMTGTALTEAEEFSRIYNLEVVAVPTNRP 474
Query: 299 NIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHN 358
IR D P Q + K++ +EVE GRPVL+G+ S+ENS+ LSD+LK++GIPH
Sbjct: 475 VIRRDQPDQIYKDLSSKFKAVVREVEETRAAGRPVLLGTVSIENSDLLSDMLKRKGIPHE 534
Query: 359 VLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPK--------------M 404
VLNA K REA VA+AG+ A+T++TNMAGRG DIILGG +
Sbjct: 535 VLNA--KKHEREASVVAEAGKPGAVTVATNMAGRGVDIILGGRLEGYEPLADLKEHLGVE 592
Query: 405 LAKKIIE-DRL------LLLLTREALNVEVDDKTSSPKVLSEIK-----LGSSSLALLAK 452
LAK ++ RL L L E ++ T + + E+K +G S L +
Sbjct: 593 LAKLPVDRSRLEQLGSGLRPLEAEITRLQGQVNTKRLEFIQEVKTAPDTVGQSGLPAEIE 652
Query: 453 AALLAKYVGKAEGKSWTYQEA-KSFFSESVEMSQSM----NLKELQKLIDKQSAMYPLGP 507
AL A+ G AE Y E + S+ E Q + + +K+ID+ +
Sbjct: 653 -ALEARLAGVAEKYLSLYAEGVEKIVSQLPEKPQKLECDIDTGLCKKVIDRDRQRF---R 708
Query: 508 TVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGST 567
T Y+ V+K GGLHVIGT HE+RRIDNQLRGRAGRQGDPGS+
Sbjct: 709 TWLENYVKVVK---------------AGGLHVIGTERHEARRIDNQLRGRAGRQGDPGSS 753
Query: 568 RFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIR 627
RF VSL+D++ ++F D L+ R DE+ PIE I + Q E Y F IR
Sbjct: 754 RFFVSLEDDIMRRFGGDMVRG--LMERFGFDENTPIENKMISNSIENSQKRVEGYNFDIR 811
Query: 628 KSLVEFDEVLEVQRKHVYDLRQSILTGANESCS--QQIFQYMQAVVDEIIFGNVDPLKHP 685
K+LVE+D+V+ R+ +Y R IL GA+ + +++ + A+VD + G L H
Sbjct: 812 KNLVEYDDVVNKHREVIYGERHKILAGADLKANILDMVYEELDAIVDSRLSG----LDH- 866
Query: 686 RYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
W LD L+ + I +P+ N
Sbjct: 867 HDWDLDGLMTDLGGI-----------------------MPQPEGFTAENL---------- 893
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
R S + +L ++DL T ++R
Sbjct: 894 ----ARMSSEEIVGFLKKSAEDLYDRKEREITPEVMR----------------------- 926
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
++ER ++++ +D W +HL + L ++ ++ YK +G + F +L
Sbjct: 927 ---QIERHLMLRVMDSLWIEHLTFVEHLRLEAGWQTLRQVKAVDAYKNEGFKAFEDLLDG 983
Query: 866 TRRLTVESLVQ 876
R V ++ +
Sbjct: 984 IRHDVVHTIFK 994
>gi|407472788|ref|YP_006787188.1| preprotein translocase subunit SecA [Clostridium acidurici 9a]
gi|407049296|gb|AFS77341.1| preprotein translocase subunit SecA [Clostridium acidurici 9a]
Length = 910
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 281/738 (38%), Positives = 396/738 (53%), Gaps = 128/738 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ+I G VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 81 MKHYRVQLIAGIVLHQGRIAEMKTGEGKTLMATLPVYLNALSGKGVHVVTVNDYLAERDK 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +V+ FLGLSVG I M ERR Y DITY N+E GFDYLRDN+ ++V
Sbjct: 141 EQMGKVYEFLGLSVGCILNSMDSSERRIAYGADITYGTNNEFGFDYLRDNMVIYKHEMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R ++ IVDEVDS+L+DE R PL+ISG K Y +A
Sbjct: 201 R---DLNYCIVDEVDSILVDEARTPLIISGMGDKSTKLYSIADHFVKTLKGRSMDPNEKK 257
Query: 144 -----ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKA 197
E +V+ + + ++ K +V LTE G+ AE +L D N + ALKA
Sbjct: 258 DMFDREYVVETVDFVIDEKAKTVTLTEVGVEKAEKYFSVENLSDPTNMEILHHINQALKA 317
Query: 198 KEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQIT 257
+ +RD+ Y+V++G+ LI++E TGR+ RR+SEG+HQA+EAKEGL++ +S +A IT
Sbjct: 318 QNTMKRDIDYVVKDGEILIVDEFTGRLMHGRRYSEGLHQAIEAKEGLEVNRESKTLATIT 377
Query: 258 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWE 317
+Q+ F++Y KLSGMTGTAKTEE EF +++ + VIE+PTN P IR D P + T K
Sbjct: 378 FQNYFRMYKKLSGMTGTAKTEEAEFREIYNVDVIEIPTNKPIIREDNPDAVYKTLEAKLN 437
Query: 318 YARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQA 377
+++ G+PVLVG+ S+E SE LS LLK+ + H VLNA K REAE VAQA
Sbjct: 438 AVVNDIKEKNEKGQPVLVGTISIEMSEVLSKLLKRVNVKHEVLNA--KQHDREAEIVAQA 495
Query: 378 GRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVL 437
GR +TI+TNMAGRGTDI+LGGNP+ +AK VE+ K S +++
Sbjct: 496 GRFGGVTIATNMAGRGTDIVLGGNPEFVAK-----------------VEMRKKGYSEELI 538
Query: 438 SEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLID 497
+E+ S +L EA+ + E++E + +E +K+I+
Sbjct: 539 TEV----DSFVDTEDEEIL---------------EARKVYRETLEKVKVQTDEENKKVIE 579
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
GGLH+IGT HESRRIDNQLRGR
Sbjct: 580 A------------------------------------GGLHIIGTERHESRRIDNQLRGR 603
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
+GRQGDPGS+RF VSL+D++ + F D + +I + +D +E + + + Q
Sbjct: 604 SGRQGDPGSSRFFVSLEDDLMRLFGGDRVKS--MIESLGMPDDEALEHRMLSKSIENAQK 661
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEII 675
E F IRK ++++D+V+ QR+ +Y R+ +L G N E + ++Q+ +D I
Sbjct: 662 KIEGNNFSIRKHVLQYDDVMNKQREVIYAERRRVLEGENLKEHVMSMVEGFLQSGID--I 719
Query: 676 FGNVDPLKHPRYWSLDKL 693
+ + K+P W L
Sbjct: 720 YTKDE--KYPEEWDFAGL 735
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 44/68 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER +L++ +D W DH+ M++L + +R+ G ++P+ Y+ +G F M+++
Sbjct: 785 LRELERVILLRMVDTKWMDHIDAMDQLKQGIGLRAMGQQDPVRAYQTEGFDMFEEMINSI 844
Query: 867 RRLTVESL 874
+ T+++L
Sbjct: 845 QEDTLKNL 852
>gi|296125904|ref|YP_003633156.1| Preprotein translocase subunit SecA [Brachyspira murdochii DSM
12563]
gi|296017720|gb|ADG70957.1| preprotein translocase, SecA subunit [Brachyspira murdochii DSM
12563]
Length = 980
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 283/737 (38%), Positives = 417/737 (56%), Gaps = 89/737 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQVMGGTVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMTPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVTRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+FAIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYFAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAEVDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y ++ K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLDEKDKNVYLTEEGVHKVEKLLNVENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
+DV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 KDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTKKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+P LVG+ SVE +E LS + K+ I H VLNA K REA+ +AQAG A
Sbjct: 459 IKELQDAGKPALVGTVSVEMNEELSKVFKRHKINHEVLNA--KNHLREAQIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIE-DRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
+T++TNMAGRGTDI+LGGNP +AK + E +++L+L+ +A K P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--VAKGVSEIEQVLVLMKDKAF------KERDPYKKEELT 568
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSA 501
++ L +A + + GK E+ E+++ N E+ + ID+
Sbjct: 569 KKVKAIDLYKEAFVRSVIAGK--------------IDEAKELAEKNNADEMIEKIDR--- 611
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQ 561
+ + S + +V + GGLHVIG+ HE+RRIDNQLRGR+GRQ
Sbjct: 612 ------IIQINEKSKIDKEKVLAA---------GGLHVIGSERHEARRIDNQLRGRSGRQ 656
Query: 562 GDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEK 621
GDPG + F +SL+D++ + F + + L + +E++ + + + + Q E
Sbjct: 657 GDPGLSVFFLSLEDDLMRLFGGERVSRMMLAMGMGEEEELGHK--WLNKSIENAQRKVEG 714
Query: 622 YYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP 681
F IRK L+E+D+V+ QR VY R IL ++ S ++ + + V ++ I D
Sbjct: 715 RNFDIRKHLLEYDDVMNQQRMAVYGERDYILY--SDDISPRVEEIIAEVTEDTIKDISDN 772
Query: 682 LKHPRYWSLDKLLKEFI 698
KH + K L ++
Sbjct: 773 KKHVDPLEVTKWLNSYL 789
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 759 RWLA---ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVL 815
+WL I D+ N + K L ++L+ +Y E ++ +EVE+ +
Sbjct: 783 KWLNSYLIAIDEDAANKAVEGGVDNAVKNLTNLLLEAYGKKSLE--VNEKIFREVEKNIF 840
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W+DHL M+ L + +R + +NPL EYK++G + F++ ++A
Sbjct: 841 LSIIDNRWKDHLFAMDSLREGIGLRGYAEKNPLTEYKLEGYKMFVATMNA 890
>gi|326201797|ref|ZP_08191668.1| preprotein translocase, SecA subunit [Clostridium papyrosolvens DSM
2782]
gi|325988397|gb|EGD49222.1| preprotein translocase, SecA subunit [Clostridium papyrosolvens DSM
2782]
Length = 912
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 291/801 (36%), Positives = 417/801 (52%), Gaps = 140/801 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G I+EMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFRVQLIGGLVLHQGRISEMKTGEGKTLVATLPVYLNALSGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+VGLI M E+RR+ Y CDITY N+ELGFDYLRDN+ E V
Sbjct: 141 EWMGKIYNFLGLTVGLIVHDMENEDRRAAYNCDITYCTNNELGFDYLRDNMVIYKEDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AIVDEVDS+LIDE R PL+ISG K Y A A L
Sbjct: 201 R---DLNYAIVDEVDSILIDEARTPLIISGMGDKSTDLYKRANSFASKLRAKVITQMDDK 257
Query: 147 -----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
V Y V+ K ++ +T GI AE +L D EN + V ALKA
Sbjct: 258 VDADEVFDEDYIVDEKAHTTVITSNGIKKAEQYFGIENLSDPENMTISHHVNQALKAHGL 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+RD Y+V NG+ I++E TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 318 MKRDKDYVVNNGEVTIVDEFTGRLMYGRRYSDGLHQAIEAKEGVKVERESKTLATITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA+TEE EF ++++ VI +PTN R D P + GK+
Sbjct: 378 YFRMYSKLAGMTGTAQTEEDEFNTIYKLDVIIIPTNREMARKDHPDVVYKNEIGKFNAVI 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++V G+PVL+G+ S+E SE+LS +LK++GIPH VLNA KY +EAE +AQAG+
Sbjct: 438 EDVVQCHEKGQPVLIGTISIEKSEFLSTMLKRKGIPHQVLNA--KYHDKEAEIIAQAGKF 495
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+TI+TNMAGRGTD I
Sbjct: 496 GAVTIATNMAGRGTD--------------------------------------------I 511
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQS 500
LG + A+Y+ K E + Y E E + S S N + +I+ +
Sbjct: 512 VLGGN-----------AEYMSKQEMRKMGYDE------ELINASTSYNETTDELIIEARE 554
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
L + KD + E +V GGLH+IGT HESRRIDNQLRGRAGR
Sbjct: 555 QFTKLN--------NKFKDI---INKEREKVVEAGGLHIIGTERHESRRIDNQLRGRAGR 603
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGD GS+RF +SL+D++ + F + ++++ + ++D PIE + + Q E
Sbjct: 604 QGDAGSSRFFISLEDDLMRLFG--SERLTNIVNALGLEDDQPIEHRMLSNAIENAQKKVE 661
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
F +RK ++++D+V+ QR+ +Y R+++L G N + ++V+D +I
Sbjct: 662 GRNFDVRKRVLQYDDVMNKQREIIYAQRKTVLDGDN--LKDYFIKMFESVIDGVIANYCT 719
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSID--------I 732
++ W ++ L+ +F I + + EE +++ID +
Sbjct: 720 ESEYADAWDWSSII--------AYLESVF--IPQGAFVLTDEEKKSMDNIDLKERLMEIV 769
Query: 733 NNFY-FPDLPKPPNLFRGIRR 752
N Y F ++ P L R + R
Sbjct: 770 NKIYEFKEMENTPELMRELER 790
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L S + +R++G R+P+ EYK +G + F M+ +
Sbjct: 785 MRELERVVLLRVVDEKWMDHIDAMDQLRSGIGLRAYGQRDPVVEYKFEGFQMFEEMIKSI 844
Query: 867 RRLTVESLVQ 876
+ ++ LV+
Sbjct: 845 QEDSIRLLVR 854
>gi|300869867|ref|YP_003784738.1| preprotein translocase subunit SecA [Brachyspira pilosicoli
95/1000]
gi|300687566|gb|ADK30237.1| preprotein translocase, subunit SecA [Brachyspira pilosicoli
95/1000]
Length = 975
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 290/733 (39%), Positives = 414/733 (56%), Gaps = 105/733 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 100 MRHFDVQIMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 159
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 160 EWMMPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVVRKEDK 218
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+ AIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 219 VQR---KFYHAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAETDERM 275
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y + K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 276 REVAGTGDYVLIEKDKNVYLTEEGVKKVEKLLNIENLYGAQSSTIVHHVNQALKAHKVFK 335
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
RDV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 336 RDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 395
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 396 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKY 455
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+PVLVG+ SVE +E LS + K+ I H VLNA K +REA+ +AQAG A
Sbjct: 456 IKELQDAGKPVLVGTVSVEMNEELSKVFKRHKITHEVLNA--KNHSREAQIIAQAGEPGA 513
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIE-DRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
+T++TNMAGRGTDI+LGGNP +AK + E +++L ++ A K P E+
Sbjct: 514 VTLATNMAGRGTDIVLGGNP--IAKGVSEIEQILTIMKDRAF------KERDPYKKEELN 565
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSA 501
S+ L +A + GK L E ++L +K +A
Sbjct: 566 QKIKSIDLYKEAFVRFVIAGK--------------------------LDEARELAEKNNA 599
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKR-----LGGLHVIGTSLHESRRIDNQLRG 556
+ L +T + NE S++ + GGLHVIG+ HE+RRIDNQLRG
Sbjct: 600 LEMLEKVERITQI-----------NEKSKIDKEKVLAAGGLHVIGSERHEARRIDNQLRG 648
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
R+GRQGDPG + F +SL+D++ + F + ++ L + +E++ + + + + Q
Sbjct: 649 RSGRQGDPGLSVFFLSLEDDLMRLFGGERVSSMMLAMGMGEEEELGHK--WLNKSIENAQ 706
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD---- 672
E F IRK L+E+D+V+ QR VY R IL ++ S +I + + V D
Sbjct: 707 RKVEGRNFDIRKHLLEYDDVMNQQRMAVYAERDYILY--SDDISPRIEEIISDVTDSTVR 764
Query: 673 EIIFG--NVDPLK 683
EI G VDP++
Sbjct: 765 EIADGKKTVDPME 777
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
K L +IL+ +Y E D+ +EVE+ + + +D W+DHL M+ L + +R +
Sbjct: 807 KNLTNILLEAYRKKSLE--VDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGY 864
Query: 843 GHRNPLEEYKIDGCRFFISML 863
+NPL EYK++G + F++ +
Sbjct: 865 AEKNPLTEYKLEGYKMFVATM 885
>gi|404476183|ref|YP_006707614.1| preprotein translocase subunit SecA [Brachyspira pilosicoli B2904]
gi|404437672|gb|AFR70866.1| preprotein translocase subunit SecA [Brachyspira pilosicoli B2904]
Length = 978
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 289/732 (39%), Positives = 414/732 (56%), Gaps = 103/732 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQIMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMMPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVVRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+ AIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYHAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAETDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y + K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLIEKDKNVYLTEEGVKKVEKLLNIENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
RDV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 RDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+PVLVG+ SVE +E LS + K+ I H VLNA K +REA+ +AQAG A
Sbjct: 459 IKELQDAGKPVLVGTVSVEMNEELSKVFKRHKITHEVLNA--KNHSREAQIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKL 442
+T++TNMAGRGTDI+LGGNP +AK + E +L + ++ + E D P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--IAKGVSEIEQILTIMKDRVFKERD-----PYKKEELNQ 569
Query: 443 GSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAM 502
S+ L +A + GK + E ++L +K +A+
Sbjct: 570 KIKSIDLYKEAFVRFVIAGK--------------------------IDEARELAEKNNAL 603
Query: 503 YPLGPTVALTYLSVLKDCEVHCSNEGSEVKR-----LGGLHVIGTSLHESRRIDNQLRGR 557
L +T + NE S++ + GGLHVIG+ HE+RRIDNQLRGR
Sbjct: 604 EMLEKVERITQI-----------NEKSKIDKEKVLAAGGLHVIGSERHEARRIDNQLRGR 652
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
+GRQGDPG + F +SL+D++ + F + ++ L + +E++ + + + + Q
Sbjct: 653 SGRQGDPGLSVFFLSLEDDLMRLFGGERVSSMMLAMGMGEEEELGHK--WLNKSIENAQR 710
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD----E 673
E F IRK L+E+D+V+ QR VY R IL ++ S +I + + V D E
Sbjct: 711 KVEGRNFDIRKHLLEYDDVMNQQRMAVYAERDYILY--SDDISPRIEEIISDVTDSTVRE 768
Query: 674 IIFG--NVDPLK 683
I G VDP++
Sbjct: 769 IADGKKTVDPME 780
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
K L +IL+ +Y E D+ +EVE+ + + +D W+DHL M+ L + +R +
Sbjct: 810 KNLTNILLEAYRKKSLE--VDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGY 867
Query: 843 GHRNPLEEYKIDGCRFFISML 863
+NPL EYK++G + F++ +
Sbjct: 868 AEKNPLTEYKLEGYKMFVATM 888
>gi|220928882|ref|YP_002505791.1| preprotein translocase subunit SecA [Clostridium cellulolyticum
H10]
gi|219999210|gb|ACL75811.1| preprotein translocase, SecA subunit [Clostridium cellulolyticum
H10]
Length = 912
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 276/719 (38%), Positives = 391/719 (54%), Gaps = 129/719 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G I+EMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFRVQLIGGLVLHQGRISEMKTGEGKTLVATLPVYLNALSGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+VGLI M EERR+ Y CDITY N+ELGFDYLRDN+ E V
Sbjct: 141 EWMGKIYNFLGLTVGLIVHDMENEERRAAYNCDITYCTNNELGFDYLRDNMVIYKEDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AIVDEVDS+LIDE R PL+ISG K Y A A L
Sbjct: 201 R---DLNYAIVDEVDSILIDEARTPLIISGMGDKSTDLYKRANSFATKLRAKVITQMDDK 257
Query: 147 -----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
V Y V+ K ++ +T GI AE +L D EN + V ALKA
Sbjct: 258 VDTDEVFDEDYIVDEKAHTTVITSNGIKKAEQYFGVENLSDPENMTISHHVNQALKAHGL 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+RD Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 318 MKRDKDYVVKDGEVIIVDEFTGRLMYGRRYSDGLHQAIEAKEGVKVERESKTLATITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA+TEE EF ++++ VI +PTN R D P + GK+
Sbjct: 378 YFRMYSKLAGMTGTAQTEEGEFNTIYKLDVILIPTNKEMARKDHPDVVYKNEIGKFNAVI 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++V G+PVL+G+ S+E SE+LS +LK++GIPH VLNA KY +EAE +AQAG+
Sbjct: 438 EDVVQCHEKGQPVLIGTISIEKSEFLSTMLKRRGIPHQVLNA--KYHDKEAEIIAQAGKL 495
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+TI+TNMAGRGTD I
Sbjct: 496 GAVTIATNMAGRGTD--------------------------------------------I 511
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQE----AKSFFSESVEMSQSMNLKELQKLI 496
LG + A+Y+ K E + Y E A + F+E+ + ++ +KL
Sbjct: 512 VLGGN-----------AEYMAKQEMRKMGYDEELINASTSFNETTDELIHEAREQFRKLN 560
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
DK A + E +V GGLH+IGT HESRRIDNQLRG
Sbjct: 561 DKFKA---------------------DINKEREKVVEAGGLHIIGTERHESRRIDNQLRG 599
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGD GS+RF +SL+D++ + F + ++++ + ++D PIE + + Q
Sbjct: 600 RAGRQGDAGSSRFYISLEDDLMRLFG--SERLTNIVNALGLEDDQPIEHRMLSNAIENAQ 657
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
E F +RK ++++D+V+ QR+ +Y R+++L G N + + ++V+D +I
Sbjct: 658 KKVEGRNFDVRKRVLQYDDVMNKQREIIYAQRKTVLDGDN--LKEYFIKMFESVIDGVI 714
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L S + +R++G R+P+ EYK +G + F M+ +
Sbjct: 785 MRELERVVLLRVVDEKWMDHIDAMDQLRSGIGLRAYGQRDPVVEYKFEGYQMFEEMVKSI 844
Query: 867 RRLTVESLVQ 876
+ ++ LV+
Sbjct: 845 QEDSIRLLVR 854
>gi|431807073|ref|YP_007233971.1| preprotein translocase subunit SecA [Brachyspira pilosicoli
P43/6/78]
gi|430780432|gb|AGA65716.1| preprotein translocase subunit SecA [Brachyspira pilosicoli
P43/6/78]
Length = 978
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 289/733 (39%), Positives = 414/733 (56%), Gaps = 105/733 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQIMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMMPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVVRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+ AIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYHAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAETDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y + K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLIEKDKNVYLTEEGVKKVEKLLNIENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
RDV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 RDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+PVLVG+ SVE +E LS + K+ I H VLNA K +REA+ +AQAG A
Sbjct: 459 IKELQDAGKPVLVGTVSVEMNEELSKVFKRHKITHEVLNA--KNHSREAQIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIE-DRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
+T++TNMAGRGTDI+LGGNP +AK + E +++L ++ A K P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--IAKGVSEIEQILTIMKDRAF------KERDPYKKEELN 568
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSA 501
S+ L +A + GK + E ++L +K +A
Sbjct: 569 QKIKSIDLYKEAFVRFVIAGK--------------------------IDEARELAEKNNA 602
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKR-----LGGLHVIGTSLHESRRIDNQLRG 556
+ L +T + NE S++ + GGLHVIG+ HE+RRIDNQLRG
Sbjct: 603 LEMLEKVERITQI-----------NEKSKIDKEKVLAAGGLHVIGSERHEARRIDNQLRG 651
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
R+GRQGDPG + F +SL+D++ + F + ++ L + +E++ + + + + Q
Sbjct: 652 RSGRQGDPGLSVFFLSLEDDLMRLFGGERVSSMMLAMGMGEEEELGHK--WLNKSIENAQ 709
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD---- 672
E F IRK L+E+D+V+ QR VY R IL ++ S +I + + V D
Sbjct: 710 RKVEGRNFDIRKHLLEYDDVMNQQRMAVYAERDYILY--SDDISPRIEEIISDVTDSTVR 767
Query: 673 EIIFG--NVDPLK 683
EI G VDP++
Sbjct: 768 EIADGKKTVDPME 780
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
K L +IL+ +Y E D+ +EVE+ + + +D W+DHL M+ L + +R +
Sbjct: 810 KNLTNILLEAYRKKSLE--VDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGY 867
Query: 843 GHRNPLEEYKIDGCRFFISML 863
+NPL EYK++G + F++ +
Sbjct: 868 AEKNPLTEYKLEGYKMFVATM 888
>gi|434381890|ref|YP_006703673.1| preprotein translocase subunit SecA [Brachyspira pilosicoli WesB]
gi|404430539|emb|CCG56585.1| preprotein translocase subunit SecA [Brachyspira pilosicoli WesB]
Length = 979
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/733 (39%), Positives = 414/733 (56%), Gaps = 105/733 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 103 MRHFDVQIMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDA 162
Query: 38 EWMERVHRFLGLSVGLIQ--RGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQL 95
EWM ++ LG+SVG++ R PE RR+ Y CD+ Y N+E GFDYLRDN+ E
Sbjct: 163 EWMMPIYSMLGISVGILDNTRPHSPE-RRAVYNCDVVYGTNNEFGFDYLRDNMVVRKEDK 221
Query: 96 VMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL----- 150
V R F+ AIVDEVDS+LIDE R PL+ISG A K++ Y ++ +L Q
Sbjct: 222 VQR---KFYHAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAETDERM 278
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
Y + K+ +V LTEEG+ E L +L+ ++ V ALKA + ++
Sbjct: 279 REVAGTGDYVLIEKDKNVYLTEEGVKKVEKLLNIENLYGAQSSTIVHHVNQALKAHKVFK 338
Query: 203 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 262
RDV Y+V +G+ LI++E TGRV E RR+S+G+HQA+EAKE + IQ +S A IT+Q+ F
Sbjct: 339 RDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYF 398
Query: 263 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 322
++YPKLSGMTGTA+TE +EF K++++ V +PTN P R DL + + T + K+E +
Sbjct: 399 RMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKY 458
Query: 323 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 382
++ + G+PVLVG+ SVE +E LS + K+ I H VLNA K +REA+ +AQAG A
Sbjct: 459 IKELQDAGKPVLVGTVSVEMNEELSKVFKRHKITHEVLNA--KNHSREAQIIAQAGEPGA 516
Query: 383 ITISTNMAGRGTDIILGGNPKMLAKKIIE-DRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
+T++TNMAGRGTDI+LGGNP +AK + E +++L ++ A K P E+
Sbjct: 517 VTLATNMAGRGTDIVLGGNP--IAKGVSEIEQILTIMKDRAF------KERDPYKKEELN 568
Query: 442 LGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSA 501
S+ L +A + GK + E ++L +K +A
Sbjct: 569 QKIKSIDLYKEAFVRFVIAGK--------------------------IDEARELAEKNNA 602
Query: 502 MYPLGPTVALTYLSVLKDCEVHCSNEGSEVKR-----LGGLHVIGTSLHESRRIDNQLRG 556
+ L +T + NE S++ + GGLHVIG+ HE+RRIDNQLRG
Sbjct: 603 LEMLEKVERITQI-----------NEKSKIDKEKVLAAGGLHVIGSERHEARRIDNQLRG 651
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
R+GRQGDPG + F +SL+D++ + F + ++ L + +E++ + + + + Q
Sbjct: 652 RSGRQGDPGLSVFFLSLEDDLMRLFGGERVSSMMLAMGMGEEEELGHK--WLNKSIENAQ 709
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD---- 672
E F IRK L+E+D+V+ QR VY R IL ++ S +I + + V D
Sbjct: 710 RKVEGRNFDIRKHLLEYDDVMNQQRMAVYAERDYILY--SDDISPRIEEIISDVTDSTIR 767
Query: 673 EIIFG--NVDPLK 683
EI G VDP++
Sbjct: 768 EIADGKKTVDPME 780
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
K L IL+ +Y E D+ +EVE+ + + +D W+DHL M+ L + +R +
Sbjct: 810 KNLTKILLEAYRKKSLE--VDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGY 867
Query: 843 GHRNPLEEYKIDGCRFFISML 863
+NPL EYK++G + F++ +
Sbjct: 868 AEKNPLTEYKLEGYKMFVATM 888
>gi|376260565|ref|YP_005147285.1| Preprotein translocase subunit SecA [Clostridium sp. BNL1100]
gi|373944559|gb|AEY65480.1| preprotein translocase, SecA subunit [Clostridium sp. BNL1100]
Length = 912
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/805 (35%), Positives = 419/805 (52%), Gaps = 148/805 (18%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G I+EMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFRVQLIGGLVLHQGRISEMKTGEGKTLVATLPVYLNALSGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+VGLI M E+RR+ Y CDITY N+ELGFDYLRDN+ E V
Sbjct: 141 EWMGKIYNFLGLTVGLIVHDMENEDRRAAYNCDITYCTNNELGFDYLRDNMVIYKEDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AIVDEVDS+LIDE R PL+ISG K Y A A L
Sbjct: 201 R---DLNYAIVDEVDSILIDEARTPLIISGMGDKSTDLYKRANSFASKLRAKVITQMDDK 257
Query: 147 -----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
V Y V+ K ++ +T GI AE +L D EN + V ALKA
Sbjct: 258 VDADEVFDEDYIVDEKAHTTVITANGIKKAEQYFGIENLSDPENMTISHHVNQALKAHGL 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+RD Y+V +G+ +I++E TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 318 MKRDKDYVVNDGEVIIVDEFTGRLMYGRRYSDGLHQAIEAKEGVKVERESKTLATITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA+TEE EF ++++ VI +PTN R D P + GK+
Sbjct: 378 YFRMYSKLAGMTGTAQTEEDEFNTIYKLDVIIIPTNREMARKDHPDVVYKNEIGKFNAVI 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++V G+PVL+G+ S+E SE+LS +LK++GIPH VLNA KY +EAE +AQAG+
Sbjct: 438 EDVVQCHEQGQPVLIGTISIEKSEFLSTMLKRKGIPHQVLNA--KYHDKEAEIIAQAGKL 495
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
A+TI+TNMAGRGTD I
Sbjct: 496 GAVTIATNMAGRGTD--------------------------------------------I 511
Query: 441 KLGSSSLALLAKAALLAKYVGKAEGKSWTYQE----AKSFFSESVEMSQSMNLKELQKLI 496
LG + A+Y+ K E + Y E A + ++E+ + ++ +KL
Sbjct: 512 VLGGN-----------AEYMAKQEMRKLGYDEELINASTSYNETTDELIIEAREQFRKLN 560
Query: 497 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRG 556
DK A+ + E +V GGLH+IGT HESRRIDNQLRG
Sbjct: 561 DKFKAV---------------------INKEREKVVEAGGLHIIGTERHESRRIDNQLRG 599
Query: 557 RAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQ 616
RAGRQGD GS+RF +SL+D++ + F + ++++ + ++D PIE + + Q
Sbjct: 600 RAGRQGDAGSSRFYISLEDDLMRLFG--SERLTNIVNALGLEDDQPIEHRMLSNAIENAQ 657
Query: 617 ISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF 676
E F +RK ++++D+V+ QR+ +Y R+++L G N + ++V+D +I
Sbjct: 658 KKVEGRNFDVRKRVLQYDDVMNKQREIIYAQRKTVLDGDN--LKDYFIKMFESVIDGVIA 715
Query: 677 GNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSID----- 731
++ W ++ L+ +F I + + EE ++ ID
Sbjct: 716 NYCTESEYSDTWDWPSII--------AYLESVF--IPQGAFVLTDEEKASMDKIDLKEKL 765
Query: 732 ---INNFY-FPDLPKPPNLFRGIRR 752
+N Y F ++ P L R + R
Sbjct: 766 MEIVNKIYEFKEIENTPELMRELER 790
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L S + +R++G R+P+ EYK +G + F M+ +
Sbjct: 785 MRELERVVLLRVVDEKWMDHIDAMDQLRSGIGLRAYGQRDPVVEYKFEGFQMFEEMIKSI 844
Query: 867 RRLTVESLVQ 876
+ ++ LV+
Sbjct: 845 QEDSIRLLVR 854
>gi|435856119|ref|YP_007317098.1| preprotein translocase subunit (chloroplast) [Nannochloropsis
gaditana]
gi|429126043|gb|AFZ64214.1| preprotein translocase subunit (chloroplast) [Nannochloropsis
gaditana]
Length = 868
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/682 (38%), Positives = 397/682 (58%), Gaps = 66/682 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
++HF+ QI+GG VL+DG IAEMKT +VTVN+YLA+RD
Sbjct: 81 LKHFETQILGGLVLNDGKIAEMKTGEGKTLVATLPASFQALSGKGVHIVTVNEYLAKRDK 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E ++ V++ LG VGLI+ M ER+ NY CDITYT N+E+GFDYLRD ++ + + V+
Sbjct: 141 ELLQVVYQTLGFEVGLIRENMETLERQYNYACDITYTTNTEVGFDYLRDLMSDSVKNRVL 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDSVLIDE + PL++S +YP A VA+ LV H+ + +
Sbjct: 201 R---TFNYCLIDEVDSVLIDEAQTPLILSSPKPLTSDKYPKALWVAKQLVPNRHFIPKYR 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
LTEEG +T+DL++ DPW F+ NAL++ FY++D YI++N + II
Sbjct: 258 TKQASLTEEGYNFLAEIFQTDDLYNPKDPWLAFIENALRSLLFYQKDQDYIIQNNQIQII 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGR+ + R+WS+G+HQA+E KE + + +S + ITY F LY KLSGMTGTAKT
Sbjct: 318 DKFTGRIAKDRKWSDGLHQAIECKEDVNVTPESQTLNSITYPKFFSLYKKLSGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E+EF + + + VI +PT P R DLP F T + K++ + + S + +GRPVLVG+
Sbjct: 378 SEQEFREFYNLDVIVIPTKKPIKRKDLPDLIFETKKAKFKALIEAIMSCYLVGRPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPH-NVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
T++E+SE +++ LK GI +LNA+P+ + EAETVAQ+G ++TI+TNMAGRGTDI
Sbjct: 438 TTIEDSEIVAETLKTLGIEDCQLLNAKPENSESEAETVAQSGALNSVTIATNMAGRGTDI 497
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALL 456
ILGGN +K II D L R+ + I G +L+L+A + L
Sbjct: 498 ILGGN----SKYIIND-----LLRQI-------------IYQLIVYGPKNLSLMANSENL 535
Query: 457 AKYVGKAEG--KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYL 514
K + + K + +++ +++ + Q L+D++ + YL
Sbjct: 536 NKILFDIQILLKDFDINLIQNYLDNVIDIESHIP----QTLLDER---------IKQLYL 582
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+L++ ++ V LGGL ++GTS HESRRIDNQLRGR+GRQGDPG ++F +SL+
Sbjct: 583 LLLENSKIELGKTRELVCNLGGLLILGTSRHESRRIDNQLRGRSGRQGDPGESQFFISLE 642
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + +D + + R + + A+ + L LQ EK+ + RKS F+
Sbjct: 643 DDLVNR--YDPNIFSPFLGRENPNSFSGTDYLAVSKTLDALQDRVEKFLYENRKSSSAFE 700
Query: 635 EVLEVQRKHVYDLRQSILTGAN 656
E+ E ++ + R+ IL +N
Sbjct: 701 EIYEYHQRLYFTFRECILEYSN 722
>gi|325283566|ref|YP_004256107.1| Protein translocase subunit secA [Deinococcus proteolyticus MRP]
gi|324315375|gb|ADY26490.1| Protein translocase subunit secA [Deinococcus proteolyticus MRP]
Length = 869
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 278/736 (37%), Positives = 399/736 (54%), Gaps = 117/736 (15%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH G IAEM+T +VTVNDYLA+ E
Sbjct: 83 RHYDVQLIGGTALHQGRIAEMRTGEGKTLVATLALALNALEGKGCHLVTVNDYLAKVGME 142
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGL+VGL+ R M P +R++ Y+ DITY NSELGFDYLRDN+A + + LV+R
Sbjct: 143 EMSLLYRTLGLTVGLVTRDMQPHQRQAAYQADITYITNSELGFDYLRDNMAQSKDSLVLR 202
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P H+AIVDEVDS+LIDE R PL+ISG A K +Y V +K+ L +G
Sbjct: 203 ADHPLHYAIVDEVDSILIDEARTPLIISGAAEKATDQYYVMSKLIRRLQKGEPAEPGVRE 262
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
Y +E K V LTE+GI E L +DL+ +N A + A++A E Y R+
Sbjct: 263 DPTGDYVIEEKGKQVHLTEQGIDKIERLLGLDDLYSPQNMDKAHMIQQAIRAAELYHREK 322
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +II+E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A +TYQ+ F+L
Sbjct: 323 DYIVNAEGEVIIIDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATVTYQNFFRL 382
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEFL ++ V+ +PTN R+DL + T GK++ +EV+
Sbjct: 383 YDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNRGIQRIDLNDLVYRTRNGKYDAVVREVQ 442
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
+ GRP+L+G+ S+ SE +S L+Q GI H VLNA K+ A+EA +AQ
Sbjct: 443 EIHATGRPILIGTASITTSEEMSAKLQQAGIQHAVLNA--KFEAQEASIIAQ-------- 492
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGS 444
AGR + + N M + ++I LG
Sbjct: 493 -----AGRSGTVTIATN--MAGRG-----------------------------TDIMLGG 516
Query: 445 SSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYP 504
+ ++ +A + + G S EA++F +K + + D +Y
Sbjct: 517 NDEFMIGEA------LEQNFGVSRYAPEAEAF------------IKAVSRGSDN---VYE 555
Query: 505 LGPTV-ALTYLSVLKDCEVHCSN--EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQ 561
LG + +T V + ++H + +VK LGGLH+IGT HESRRIDNQLRGRAGRQ
Sbjct: 556 LGAQIPGVTRDFVAQAVQLHADTLADREKVKELGGLHIIGTERHESRRIDNQLRGRAGRQ 615
Query: 562 GDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEK 621
GDPGS+RF +S D++ + F+ + A ++ R+ D+ IE + + Q E
Sbjct: 616 GDPGSSRFYLSFDDDLMRLFANERITA--MMDRVGFDDSEAIEAKMVTGAIEKAQSRVED 673
Query: 622 YYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANE----SCSQQIFQYMQAVVDEIIFG 677
FGIRK L+EFD V+ QR+ +Y R+ +L G +E S + +++ ++DE
Sbjct: 674 RNFGIRKQLLEFDNVMSSQRETIYAQRREVLLGEDEEVELSVEGMVGDHLELLLDEF--- 730
Query: 678 NVDPLKHPRYWSLDKL 693
P + P W L+ L
Sbjct: 731 -APPEQAPEEWDLEGL 745
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M + R V+++ +D W++HL NM+ L + +R +G R+P EYK + F M+
Sbjct: 796 MNSLSRYVMLQVVDQHWKEHLYNMDVLRQGIGLRGYGQRDPFTEYKFEATNMFNEMIDGL 855
Query: 867 R 867
+
Sbjct: 856 K 856
>gi|406980871|gb|EKE02425.1| hypothetical protein ACD_20C00391G0019 [uncultured bacterium]
Length = 937
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/434 (50%), Positives = 298/434 (68%), Gaps = 31/434 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFD+Q+IGG VLH G IAEM+T +VTVNDYLA+RD+
Sbjct: 94 MRHFDMQLIGGVVLHRGGIAEMRTGEGKTLVATLPAYLNALTEKGVHIVTVNDYLAKRDS 153
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEE---RRSNYRCDITYTNNSELGFDYLRDNLAANSEQ 94
EWM +++ FLGL VG++ E ++ Y DITY N+E GFDYLRDN++ + EQ
Sbjct: 154 EWMGKIYNFLGLDVGVVLANRSFNEFELKKQAYAADITYGTNNEFGFDYLRDNMSGSLEQ 213
Query: 95 LVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTV 154
LV R P ++AIVDEVDS+LIDE R PL+ISG K Y AKVA LLV+ + YTV
Sbjct: 214 LVQR---PVYYAIVDEVDSILIDEARTPLIISGRLEKSAETYKTMAKVAPLLVKDVDYTV 270
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKA 214
E KN +V L EEGI A+ + DL+D +A ++ ALKA+E YR+DV Y+++NG+
Sbjct: 271 EEKNKNVILNEEGIDKAQELIGVKDLFDPATQYAHHLLQALKAEELYRKDVDYVIKNGEV 330
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
+I++E TGR+ E RRWS+G+HQAVEAKEG+ IQ ++ +A IT+Q+LF+LYPKL+GMTGT
Sbjct: 331 VIVDEFTGRLMEGRRWSDGLHQAVEAKEGVAIQDETQTLASITFQNLFRLYPKLAGMTGT 390
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TEE EF K++++ V +PTN ++R D P + T + K+ E+E + GRP+L
Sbjct: 391 AMTEEAEFGKIYKLEVSSIPTNRKDVRTDYPDIIYKTEKQKYISVADEIEEIHEQGRPIL 450
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+ S+E SE++S LLK++G+ HNVLNA K+ +EA +AQAGR AITI+TNMAGRGT
Sbjct: 451 VGTISIEKSEHISSLLKKRGLKHNVLNA--KHHEKEAHIIAQAGRYGAITIATNMAGRGT 508
Query: 395 DIILGGNPKMLAKK 408
DI+LGGN + LAK+
Sbjct: 509 DILLGGNHEFLAKE 522
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 176/358 (49%), Gaps = 52/358 (14%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+E V GGLHVIGT HESRRIDNQLRGRA RQGDPGSTRF +SL+D + + F
Sbjct: 554 TQDEHKRVVEAGGLHVIGTERHESRRIDNQLRGRAARQGDPGSTRFFLSLEDSLMRIFGG 613
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D +A L+ + DEDM IE + R + Q E Y+F IRK ++E+D+V+ QR+
Sbjct: 614 DKIFA--LMETLKVDEDMAIEAPLVSRSIQSAQKKVETYHFDIRKHVLEYDDVINQQREL 671
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
Y R+ +L G N + + + V++I+ G ++P SLD+ E +
Sbjct: 672 FYRQRRKVLEGGN--IYEDVLHMIDQEVNQIMGGYINP-----EMSLDEYDDETLK---- 720
Query: 704 ILDDLFAGISGDTLLKSIE-ELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
++LK++ +P+L+ ID+ + +G+ K + L L
Sbjct: 721 ------------SMLKALHSSIPQLSYIDLTS------------IKGL--KYNVLYDKLK 754
Query: 763 ICSDDLTKNGR------YRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
+ D K Y +T + D QE + M+ +ER +L+
Sbjct: 755 DAALDAYKKHEAEIVHFYNSTLGQSHEVDQDKFEP------QEVSASNNIMRSLERDILL 808
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ D W DHL N++ L + +R++G ++PL EYK + F +M+ +R TV L
Sbjct: 809 RIADSKWIDHLHNIDMLREGIGLRAYGQKDPLIEYKREAFDMFNTMMHDIQRETVAHL 866
>gi|125525645|gb|EAY73759.1| hypothetical protein OsI_01632 [Oryza sativa Indica Group]
Length = 978
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/555 (45%), Positives = 334/555 (60%), Gaps = 63/555 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 51 LRPFDVQLIGGMVLHKGEIAEMKTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 110
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+RR NY CDITY NSELGFDYLRDNLA ++LV+
Sbjct: 111 EWVGQVPRFLGLQVGLIQQNMTPEQRRENYLCDITYVTNSELGFDYLRDNLAMTVDELVL 170
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+AE+ + +HYTV+ K
Sbjct: 171 R---NFNYCVIDEVDSILIDEARTPLIISGLAEKPSDRYYKAAKIAEVFERDIHYTVDEK 227
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTEEG A AE L+ NDL+D + WA +V+NA+KAKE + RDV YIVR+ + LI+
Sbjct: 228 QRNVLLTEEGYADAEEILDINDLYDPREQWASYVLNAIKAKELFLRDVNYIVRSKEVLIV 287
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + A++G+ + T Q K +PKL GMTGTA T
Sbjct: 288 DEFTGRVMPMLPFGR-------AEDGVMV---------FTKQLKLKKFPKLCGMTGTAAT 331
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF ++++ V VPTN P IR D F GKW A E+ M ++GRPVLVG+
Sbjct: 332 ESQEFESIYKLKVTVVPTNKPMIRKDESDVVFRATNGKWRAAVVEISRMNKVGRPVLVGT 391
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS+ L + GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 392 TSVEQSETLSEQLHEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 451
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-------VLSEIKLGSSSLALL 450
LGGN + +A+ + + L+ + V + K +SPK L +L +L+ +
Sbjct: 452 LGGNAEFMARLKLREMLMPRVVDPLDGVIISKKQASPKKTWKTNESLFPCELSKDALSYV 511
Query: 451 AKAALLAKYVGKAEG-KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
++ +A KA G KS T EA+ S S E +S+ + E ++ P V
Sbjct: 512 KESVEVAV---KAWGEKSLTELEAEERLSYSCEKGRSILIVEFGDIL----------PKV 558
Query: 510 ALTYLSVLKDCEVHC 524
A+ L +C + C
Sbjct: 559 AVIANKGLTNCIIGC 573
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 178/366 (48%), Gaps = 63/366 (17%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
++ ++ + +V+ E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF +
Sbjct: 641 AFMKIMDEYKVYTEEEKKQVISAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFL 700
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D +F+ F D + R+ ED+PIE + R L Q E Y+F IRK L
Sbjct: 701 SLEDNIFRIFGGDRIQGLMQAFRV---EDLPIESKMLTRALDEAQRKVENYFFDIRKQLF 757
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD 691
E+DEVL QR VY R+ L A++S I +Y + +D+I+ N+ P W L
Sbjct: 758 EYDEVLNSQRDRVYAERRRAL--ASDSLESLIVEYAELTMDDILEANIGPDTPREDWDLS 815
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
KL+ + +LDDL P L G
Sbjct: 816 KLIAKLQQYC-YLLDDL----------------------------------TPELLEG-- 838
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
KSSS +DL + R R +K +V++ MKE E
Sbjct: 839 -KSSSY--------EDLQEYLRTRGREAYYQK----------AEIVEKQAPG--LMKEAE 877
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR +
Sbjct: 878 RFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI 937
Query: 872 ESLVQY 877
S+ Q+
Sbjct: 938 YSVYQF 943
>gi|317121050|ref|YP_004101053.1| protein translocase subunit secA [Thermaerobacter marianensis DSM
12885]
gi|315591030|gb|ADU50326.1| protein translocase subunit secA [Thermaerobacter marianensis DSM
12885]
Length = 952
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/433 (51%), Positives = 300/433 (69%), Gaps = 30/433 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ++GG VLH+G +AEMKT VVTVNDYLA+RDA
Sbjct: 79 MRPFDVQLMGGIVLHEGKVAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLAKRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGL+VG+I G+ EERR Y DITY N+E GFDYLRDN+A +Q+V
Sbjct: 139 EWMGRIYRFLGLTVGVIVHGLTFEERRRAYAADITYGTNNEFGFDYLRDNMALYPDQVVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A K Y A++A L + YTV+ K
Sbjct: 199 R---ELYYAIVDEVDSILIDEARTPLIISGMADKPTELYYQFAQIARKLERDRDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDP--WARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V TEEG+ E L +L+ ++P +A +++NALKAKE RRDV Y+V++G+ +
Sbjct: 256 ARTVAPTEEGVHRVEQMLGVENLYAPDNPVDYAHYLINALKAKELMRRDVDYVVKDGQVI 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKEGLKI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 IVDEFTGRLMFGRRYSDGLHQAIEAKEGLKIERESQTLATITFQNYFRMYEKLAGMTGTA 375
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TEE+EF K++ + V+ +PTN P IR D P + T K+ +E+ R G+PVLV
Sbjct: 376 ATEEEEFSKIYGLDVVVIPTNKPMIRRDYPDVIYKTEAAKFRAVVEEIVECHRRGQPVLV 435
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE LS++LK++GIPH VLNA KY REAE +AQAGR A+TI+TNMAGRGTD
Sbjct: 436 GTISIEKSERLSEMLKRRGIPHQVLNA--KYHEREAEIIAQAGRVGAVTIATNMAGRGTD 493
Query: 396 IILGGNPKMLAKK 408
I+LGGNP+ LA++
Sbjct: 494 ILLGGNPEFLARQ 506
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 175/375 (46%), Gaps = 71/375 (18%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
YL +L++ + E V LGGLH+IGT HE+RRIDNQLRGRAGRQGDPGS+RF +S
Sbjct: 539 YLRLLEEAKKETEAEHKRVVELGGLHIIGTERHEARRIDNQLRGRAGRQGDPGSSRFYLS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D + + R+ +ED PIE I R + Q E F +RK ++E
Sbjct: 599 LEDDLLRLFGSDNIRGI--MDRLGVEEDEPIEHPLITRAIENAQRKVEHRNFTLRKQVLE 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E + + M ++ + + HP W+
Sbjct: 657 YDDVMNKQREVIYAERRRVLNG--EDVHEHVLGMMDDIIKNALDNYCNEHAHPEEWN--- 711
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
L+ L + G+ Y P
Sbjct: 712 ------------LEGLVEYLEGN--------------------YLP-------------- 725
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESR--YDDVYMKEV 810
+ +LK +D+L GR L + A++L V +E M+E+
Sbjct: 726 -AGTLK------ADELADMGR---------DALAQEIKAAFLRVYEEKEKAVGSAMMREL 769
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
ER VL++ +D W DHL M+ L + +R++G R+PL EYK + F M+ + +
Sbjct: 770 ERVVLLRVVDQKWVDHLAAMDNLRDGIGLRAYGQRDPLLEYKFEAFEMFQQMIESIKEDV 829
Query: 871 VESLVQYWSSPMESQ 885
V +L+ P +++
Sbjct: 830 VRTLMHLEVRPGQAE 844
>gi|125570149|gb|EAZ11664.1| hypothetical protein OsJ_01526 [Oryza sativa Japonica Group]
Length = 1004
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/555 (45%), Positives = 334/555 (60%), Gaps = 63/555 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 77 LRPFDVQLIGGMVLHKGEIAEMKTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLARRDC 136
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ +V RFLGL VGLIQ+ M PE+RR NY CDITY NSELGFDYLRDNLA ++LV+
Sbjct: 137 EWVGQVPRFLGLQVGLIQQNMTPEQRRENYLCDITYVTNSELGFDYLRDNLAMTVDELVL 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++ ++DEVDS+LIDE R PL+ISG A K RY AAK+AE+ + +HYTV+ K
Sbjct: 197 R---NFNYCVIDEVDSILIDEARTPLIISGLAEKPSDRYYKAAKIAEVFERDIHYTVDEK 253
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V LTEEG A AE L+ NDL+D + WA +V+NA+KAKE + RDV YIVR+ + LI+
Sbjct: 254 QRNVLLTEEGYADAEEILDINDLYDPREQWASYVLNAIKAKELFLRDVNYIVRSKEVLIV 313
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + A++G+ + T Q K +PKL GMTGTA T
Sbjct: 314 DEFTGRVMPMLPFGR-------AEDGVMV---------FTKQLKLKKFPKLCGMTGTAAT 357
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF ++++ V VPTN P IR D F GKW A E+ M ++GRPVLVG+
Sbjct: 358 ESQEFESIYKLKVTVVPTNKPMIRKDESDVVFRATNGKWRAAVVEISRMNKVGRPVLVGT 417
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS+ L + GIPH VLNA+P+ REAE VAQ+GR A+TI+TNMAGRGTDII
Sbjct: 418 TSVEQSETLSEQLHEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDII 477
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK-------VLSEIKLGSSSLALL 450
LGGN + +A+ + + L+ + V + K +SPK L +L +L+ +
Sbjct: 478 LGGNAEFMARLKLREMLMPRVVDPLDGVIISKKQASPKKTWKTNESLFPCELSKDALSYV 537
Query: 451 AKAALLAKYVGKAEG-KSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTV 509
++ +A KA G KS T EA+ S S E +S+ + E ++ P V
Sbjct: 538 KESVEVAV---KAWGEKSLTELEAEERLSYSCEKGRSILIVEFGDIL----------PKV 584
Query: 510 ALTYLSVLKDCEVHC 524
A+ L +C + C
Sbjct: 585 AVIANKGLTNCIIGC 599
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 178/366 (48%), Gaps = 63/366 (17%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
++ ++ + +V+ E +V GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF +
Sbjct: 667 AFMKIMDEYKVYTEEEKKQVISAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFL 726
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D +F+ F D + R+ ED+PIE + R L Q E Y+F IRK L
Sbjct: 727 SLEDNIFRIFGGDRIQGLMQAFRV---EDLPIESKMLTRALDEAQRKVENYFFDIRKQLF 783
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD 691
E+DEVL QR VY R+ L A++S I +Y + +D+I+ N+ P W L
Sbjct: 784 EYDEVLNSQRDRVYAERRRAL--ASDSLESLIVEYAELTIDDILEANIGPDTPREDWDLS 841
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
KL+ + +LDDL P L G
Sbjct: 842 KLIAKLQQYC-YLLDDL----------------------------------TPELLEG-- 864
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
KSSS +DL + R R +K +V++ MKE E
Sbjct: 865 -KSSSY--------EDLQEYLRTRGREAYYQK----------AEIVEKQAPG--LMKEAE 903
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R +++ +D W++HL + + AV +R + R+PL EYK++G F+ M++ RR +
Sbjct: 904 RFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI 963
Query: 872 ESLVQY 877
S+ Q+
Sbjct: 964 YSVYQF 969
>gi|257057059|ref|YP_003134891.1| preprotein translocase subunit SecA [Saccharomonospora viridis DSM
43017]
gi|256586931|gb|ACU98064.1| protein translocase subunit secA [Saccharomonospora viridis DSM
43017]
Length = 955
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 310/463 (66%), Gaps = 34/463 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT VVT NDYLAQRD+E
Sbjct: 79 RHYDVQLMGGAALHLGQVAEMKTGEGKTLTSLLPVYLNALPGKGVHVVTTNDYLAQRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I+ + P ER++ Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 139 WMGRVHRFLGLEVGVIRSDLTPAERKAAYAADITYGTNNEFGFDYLRDNMAWSLDDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 199 G---HYYAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARMAPLMKRDVHYEVDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ +TE G+ E L ++L+D N P F+ NALKAKE Y RD +YIVRNG+ LI+
Sbjct: 256 RAIGVTELGVEFVEDQLGIDNLYDAANTPLVGFLNNALKAKELYHRDKEYIVRNGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DEFTGRVLPGRRFNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYEKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P IRVD P + T K+E ++ G+PVLVG+
Sbjct: 376 EAAEFHQTYKLGVVPIPTNRPMIRVDQPDLIYKTEEAKFEAVADDIAERHEKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA K+ REA VA+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVEKSEYLSKLLLKRGVPHEVLNA--KHHHREALIVAKAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
LGGNP +LA +++ +R L + + + + PKVL E+
Sbjct: 494 LGGNPDILADEVLRERGL-----DPVENSEEYEAEWPKVLEEV 531
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ C E EV + GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL D
Sbjct: 527 VLEEVTAECKAEAEEVVKAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + R + Q E+ IRK+++++DE
Sbjct: 587 ELMRRFNAGMVERVMTTMRLPD--DVPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDK 692
V+ QRK +Y R+ +L G + E I + A V+ G + H + W+ K
Sbjct: 645 VMNQQRKVIYAERRRVLEGEDLREQMRHMITDVITAYVNGATAEGYAEDWDHAKLWTALK 704
Query: 693 LL 694
L
Sbjct: 705 TL 706
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ RNPL EY+ +G F +ML +
Sbjct: 756 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRNPLVEYQREGFDMFNAMLDSL 815
Query: 867 RRLTV 871
+ V
Sbjct: 816 KEEAV 820
>gi|406830609|ref|ZP_11090203.1| preprotein translocase subunit SecA [Schlesneria paludicola DSM
18645]
Length = 1209
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/429 (50%), Positives = 288/429 (67%), Gaps = 26/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT----------------------VVTVNDYLAQRDAE 38
MRH+DVQ++GG +LH G IAEM T VVTVNDYLAQRD E
Sbjct: 111 MRHYDVQMVGGYILHKGMIAEMMTGEGKTLVSSLPAFLNAVAGSVHVVTVNDYLAQRDME 170
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +H LGL++G IQ M ERR+ Y CDITY N+E GFDYLRDN+ +++ V
Sbjct: 171 WMGPLHMGLGLTIGAIQSNMDTFERRTAYACDITYGTNNEFGFDYLRDNMKMYAQEQVQ- 229
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AI+DE+D++LIDE R PL+ISG A D+++YP A K+A L + +H+ V+ K
Sbjct: 230 --GKLTYAIIDEIDNILIDEARTPLIISGRAHDDISKYPKAEKIARQLQRDVHFEVKEKE 287
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LTE G+ AE + N W + NAL+A Y+RDV YIVR + +II
Sbjct: 288 HTCHLTEAGVRHAEELAGVESFYTAGNMEWPHLIDNALRAHHLYKRDVNYIVRGDEIIII 347
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E R+WS+G+HQAVEAKEG+KI+ ++ +A IT Q+ FKLY KLSGMTGTA T
Sbjct: 348 DEHTGRMMEGRQWSDGLHQAVEAKEGVKIKEETQTLATITLQNFFKLYKKLSGMTGTAMT 407
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF+K++ + VI VPTN P RV+ P + T R KW+ +E++ + + GRPVL+G+
Sbjct: 408 EAAEFVKIYNLDVITVPTNRPMKRVNYPDAVYRTEREKWDAVVEEIKEVHQTGRPVLLGT 467
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS L + G+ H +LNA+P+YA REAET+AQAGR+ +TI+TNMAGRGTDII
Sbjct: 468 VSIENSEKLSHKLTKNGVKHKLLNAKPEYAEREAETIAQAGRQNVVTIATNMAGRGTDII 527
Query: 398 LGGNPKMLA 406
LGGNP+ LA
Sbjct: 528 LGGNPEYLA 536
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 106/190 (55%), Gaps = 14/190 (7%)
Query: 504 PLGPTVALTYLSVLKDCEVHCSN------EGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
PL PT SV D + EG V LGGLHVIGT H+SRRID QLRGR
Sbjct: 550 PLYPTRLDVPKSVWNDLTKQIAKREGMEEEGRRVAELGGLHVIGTERHDSRRIDLQLRGR 609
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
AGRQGD GS+RF +SL+D++ +KF + + D ++R+ E IE + RQ+ Q
Sbjct: 610 AGRQGDNGSSRFFISLEDDLMRKFGGE--FVKDWLARLGMQEGERIESPLVTRQIESSQK 667
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
E+ +F RK L+E+DEV++ QRK VY RQSIL GAN C I + ++D+ +
Sbjct: 668 KVEERFFEQRKHLLEYDEVMDEQRKRVYSYRQSILEGAN--CRNLILE----MIDKQLLS 721
Query: 678 NVDPLKHPRY 687
D Y
Sbjct: 722 KCDYFTRSTY 731
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 800 SRYDDVYMKEV---ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
S Y+ Y E+ ER+V ++TLD W+DHL M++L S + + + ++P EY+ +G
Sbjct: 1050 SLYERKYRYEIHSGERSVSLETLDTAWKDHLYFMDQLKSGIGLVGYAQKDPKVEYRREGM 1109
Query: 857 RFFISM 862
R F M
Sbjct: 1110 RAFEQM 1115
>gi|375102325|ref|ZP_09748588.1| preprotein translocase, SecA subunit [Saccharomonospora cyanea
NA-134]
gi|374663057|gb|EHR62935.1| preprotein translocase, SecA subunit [Saccharomonospora cyanea
NA-134]
Length = 983
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/463 (48%), Positives = 311/463 (67%), Gaps = 34/463 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEM+T VVT NDYLAQRD+E
Sbjct: 103 RHYDVQLMGGAALHLGQVAEMRTGEGKTLTSLLPVYLNALPGKGVHVVTTNDYLAQRDSE 162
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +G+I+ M P ER++ Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 163 WMGRVHRFLGLDIGVIRSDMSPAERKAAYAADITYGTNNEFGFDYLRDNMAWSLDDCVQR 222
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 223 G---HNFAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARMAPLMKKDVHYEVDERK 279
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L ++L++ N P F+ NALKAKE YR+D +YIVRNG+ LI+
Sbjct: 280 RAVGVTEAGVEFVEDQLGIDNLYEAANTPLVGFLNNALKAKELYRKDKEYIVRNGEVLIV 339
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 340 DEFTGRVLAGRRFNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 399
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + + + V+ +PTN P +RVD P + T K+E ++ G+PVLVG+
Sbjct: 400 EAAEFHQTYNLGVVPIPTNRPMVRVDQPDLIYKTEEAKFEAVADDIAERHEKGQPVLVGT 459
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA+ + REA VA+AGRK A+T++TNMAGRGTDI+
Sbjct: 460 TSVEKSEYLSKLLLKRGVPHEVLNAKQHH--REALIVAKAGRKGAVTVATNMAGRGTDIV 517
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
LGGNP ++A +++ +R L + + + + + PKVL E+
Sbjct: 518 LGGNPDIIADEVLRERGL-----DPVEHSEEYEAAWPKVLEEV 555
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ C E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 551 VLEEVTAECKVEAEEVLEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 610
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + R + Q E+ IRK+++++DE
Sbjct: 611 ELMRRFNAAMVERVMTTMRLPD--DVPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDE 668
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQA-VVDEIIFGNVDPLKHPRYWSLDK 692
V+ QRK +Y R+ +L G N E I + A V G + H + W+ K
Sbjct: 669 VMNQQRKVIYAERRRVLKGENLREQVEHMITDVVTAYVTGATAEGYAEDWDHAKLWTALK 728
Query: 693 LLKEFIAIAGKILDD 707
L +I+D+
Sbjct: 729 TLYPVGVTWDEIMDE 743
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ RNPL EY+ +G F +ML +
Sbjct: 780 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRNPLVEYQREGFDMFNAMLDSL 839
Query: 867 RRLTV 871
+ V
Sbjct: 840 KEEAV 844
>gi|410584256|ref|ZP_11321361.1| protein translocase subunit secA [Thermaerobacter subterraneus DSM
13965]
gi|410505118|gb|EKP94628.1| protein translocase subunit secA [Thermaerobacter subterraneus DSM
13965]
Length = 931
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/433 (51%), Positives = 299/433 (69%), Gaps = 30/433 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ++GG VLH+G +AEMKT +VTVNDYL +RDA
Sbjct: 79 MRPFDVQLMGGIVLHEGKVAEMKTGEGKTLVATMPAYLNALLGRGVHIVTVNDYLPRRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGL+VG+I G+ +ERR Y DITY N+E GFDYLRDN+A +Q+V
Sbjct: 139 EWMGRIYRFLGLTVGVIVHGLSFDERRRAYAADITYGTNNEFGFDYLRDNMALYPDQIVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A K Y A++A L + YTV+ K
Sbjct: 199 R---ELYYAIVDEVDSILIDEARTPLIISGMADKPTELYYQFAQIARKLERDRDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDP--WARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V TEEG+ E L +L+ ++P +A +++NALKAKE RRDV Y+V++G+ +
Sbjct: 256 ARTVAPTEEGVHRVEQMLGVENLYAPDNPVDYAHYLINALKAKELMRRDVDYVVKDGQVI 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE LKI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 IVDEFTGRLMFGRRYSDGLHQAIEAKENLKIERESQTLATITFQNYFRMYQKLAGMTGTA 375
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TEE+EF K++ + V+ +PTN P IR DLP + T K+ +E+ R G+PVLV
Sbjct: 376 ATEEEEFSKIYGLDVVVIPTNKPMIRRDLPDVIYKTEAAKFRAVVEEIAECHRRGQPVLV 435
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE LS++LK++GIPH VLNA KY REAE +AQAGR A+TI+TNMAGRGTD
Sbjct: 436 GTISIEKSERLSEMLKRRGIPHQVLNA--KYHEREAEIIAQAGRVGAVTIATNMAGRGTD 493
Query: 396 IILGGNPKMLAKK 408
I+LGGNP+ LA++
Sbjct: 494 ILLGGNPEFLARQ 506
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 9/214 (4%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
YL +L++ + E V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +S
Sbjct: 539 YLRLLEEAKRETEAEHQRVVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D+ ++ + R+ +ED PIE I R + Q E F +RK ++E
Sbjct: 599 LEDDLMRLFGSDSIRSI--MDRLGVEEDEPIEHPLITRAIENAQRKVEHRNFTLRKQVLE 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L+G E + I M ++ + + HP W+L+
Sbjct: 657 YDDVMNKQREVIYAERRKVLSG--EDVHEHILGMMDDIIQHALDNYCNEHAHPEEWNLEG 714
Query: 693 LLKEFIA----IAGKILDDLFAGISGDTLLKSIE 722
L+ E++ AG + + A + D L + I+
Sbjct: 715 LV-EYLEGNYLPAGTLKAEELADLGRDALAQEIK 747
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 778 TNLLRKYLGDILIASYLNVVQESR--YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSS 835
+L R L + A++L + +E M+E+ER VL++ +D W DHL M+ L
Sbjct: 735 ADLGRDALAQEIKAAFLRIYEEKEKAIGSAMMRELERVVLLRAVDQKWVDHLAAMDDLRD 794
Query: 836 AVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQ 885
+ +R++G R+PL EYK + F M+ + + + L+ P +++
Sbjct: 795 GIGLRAYGQRDPLLEYKFEAFEMFQQMIESIKEDVIRILMHMEVRPGQAE 844
>gi|251773168|gb|EES53721.1| preprotein translocase, SecA subunit [Leptospirillum
ferrodiazotrophum]
Length = 896
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/429 (50%), Positives = 292/429 (68%), Gaps = 29/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGAVLH+G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQIMGGAVLHEGRIAEMKTGEGKTLVGTLPVYLNALEGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGLSVGLIQ M + R+ Y CDITY N+E GFDYLRDN+ EQ
Sbjct: 141 EWMGRLYRFLGLSVGLIQHDMPDDLRQEAYACDITYGTNNEFGFDYLRDNMKYELEQFAQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+LIDE R PL+ISG + + Y ++ L+ G H+TV+LK
Sbjct: 201 R---PLNFAIVDEVDSILIDESRTPLIISGPSEESTDLYERVDRIIPRLIPGQHFTVDLK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V +TEEG L E L+ +L+D +N + +M A+KA YRRDV Y+V+NG+ +I
Sbjct: 258 HKTVSMTEEGSDLVESLLDVGNLYDLKNISFVHHLMQAVKAHHLYRRDVDYVVKNGEVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRW EG+HQAVEAKE +KIQ ++ +A +T+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMAGRRWGEGLHQAVEAKEKVKIQMENQTLATVTFQNYFRMYRKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +P + IR+DLP Q + T + K++ ++ ++G+PVLVG
Sbjct: 378 TEATEFHRIYGLDVIVIPPHRKMIRIDLPDQVYRTQKEKYDAVVLDIIERHQVGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S LL ++ IPH VLNA K+ +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELISRLLMEKKIPHEVLNA--KFHEKEAEIVAQAGRLGKVTIATNMAGRGTDI 495
Query: 397 ILGGNPKML 405
+LGGNP+ L
Sbjct: 496 LLGGNPEFL 504
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 4/182 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++L E E V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+
Sbjct: 523 ALLATFEEMAKKEREAVVALGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLE 582
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F + L+ R+ +E +PIE + + + Q E Y+F IRK L+E+D
Sbjct: 583 DDLMKIFGAEKIKG--LMERMGMEEGVPIEHAFVTKAIQNAQKKVETYHFDIRKQLLEYD 640
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ QR Y+LR+ +L G E + + ++ +I + +P + L L+
Sbjct: 641 DVMNQQRLVFYELRKRVLKG--EGLRDLVSTWGSRSLERLILSIIPEDAYPESYDLQGLV 698
Query: 695 KE 696
++
Sbjct: 699 EK 700
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
R V ++ LD W++HL+ M+RL + +R +G ++PL EYK +G F
Sbjct: 751 RYVALQALDNGWKEHLLTMDRLKEGIGLRGYGQKDPLVEYKREGFDLF 798
>gi|384567273|ref|ZP_10014377.1| preprotein translocase, SecA subunit [Saccharomonospora glauca K62]
gi|384523127|gb|EIF00323.1| preprotein translocase, SecA subunit [Saccharomonospora glauca K62]
Length = 1003
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/463 (47%), Positives = 312/463 (67%), Gaps = 34/463 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT VVT NDYLAQRD+E
Sbjct: 119 RHYDVQLMGGAALHLGQVAEMKTGEGKTLTSLLPVYLNALPGKGVHVVTTNDYLAQRDSE 178
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +G+I+ M P ER++ Y D+TY N+E GFDYLRDN+A + + V R
Sbjct: 179 WMGRVHRFLGLEIGVIRSDMSPAERKAAYAADVTYGTNNEFGFDYLRDNMAWSLDDCVQR 238
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 239 G---HNYAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARMAPLMKRDVHYEVDERK 295
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ +TE G+ E L ++L++ N P F+ NALKAKE YR+D +YIVRNG+ LI+
Sbjct: 296 RAIGVTEAGVEFVEDQLGIDNLYEAANTPLVGFLNNALKAKELYRKDKEYIVRNGEVLIV 355
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 356 DEFTGRILAGRRFNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 415
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P IRVD P + T K+E ++ G+PVLVG+
Sbjct: 416 EAAEFHQTYKLGVVPIPTNRPMIRVDQPDLIYKTEEAKFEAVADDIAERHEKGQPVLVGT 475
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA+ + REA VA+AGRK A+T++TNMAGRGTDI+
Sbjct: 476 TSVEKSEYLSKLLLKRGVPHEVLNAKQHH--REALIVAKAGRKGAVTVATNMAGRGTDIV 533
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
LGGNP ++A +++ +R L + + + + + PKVL E+
Sbjct: 534 LGGNPDIIADEVLRERGL-----DPVENSEEYEAAWPKVLEEV 571
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ C E EV + GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL D
Sbjct: 567 VLEEVTAECKAEAEEVLKAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLGD 626
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + R + Q E+ IRK+++++DE
Sbjct: 627 ELMRRFNAAMVERVMTTMRLPD--DVPIEHKIVSRAIKSAQTQVEQQNMEIRKNVLKYDE 684
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDK 692
V+ QRK +Y R+ +L G N E I + A V+ G + H + W+ K
Sbjct: 685 VMNQQRKVIYAERRRVLEGENLREQIQHMITDVITAYVNGATAEGYAEDWDHAKLWTALK 744
Query: 693 LL 694
L
Sbjct: 745 TL 746
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ RNPL EY+ +G F +ML +
Sbjct: 796 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRNPLVEYQREGFDMFNAMLDSL 855
Query: 867 RRLTV 871
+ V
Sbjct: 856 KEEAV 860
>gi|405980519|ref|ZP_11038858.1| preprotein translocase, SecA subunit [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390512|gb|EJZ85581.1| preprotein translocase, SecA subunit [Actinomyces turicensis
ACS-279-V-Col4]
Length = 942
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/723 (37%), Positives = 394/723 (54%), Gaps = 128/723 (17%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQ++GG LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPFHVQVMGGIALHKGNIAEMKTGEGKTLVATMPAYLRALTGKGVHVVTVNDYLAKYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+ FLGL+ G + G P ERR Y DITY N+E GFDYLRDN+A+ + +V
Sbjct: 139 DIMARVYNFLGLTTGCVLVGQKPAERRKQYEADITYGTNNEFGFDYLRDNMASTLDDMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGLHYTVEL 156
R ++ IVDEVDS+LIDE R PL+ISG AS DV + V A++A +L + + Y V+
Sbjct: 199 RG---HNYVIVDEVDSILIDEARTPLIISGPASGDVNHWYVEFARIARMLERDVDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K ++ + E GI E L +L++ N P F+ N+++AKE + +D YIV +G+ L
Sbjct: 256 KKKTIGVLEAGIDHVEDQLGVENLYEAANTPLIGFLNNSIRAKELFHKDKDYIVTDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS--GMTG 273
I++E TGRV RR+++G+HQA+EAKEG++IQA++ +A IT Q+ F+LYP+ S GMTG
Sbjct: 316 IVDEHTGRVLPGRRYNDGMHQAIEAKEGVEIQAENQTLATITLQNYFRLYPEGSRAGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ VI +PTN P IR D P F + GK + +++ G+PV
Sbjct: 376 TAETEAAEFASTYKIGVIPIPTNKPMIRKDQPDFVFPSEAGKLKAIIEDIAERHEKGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVE SE LS LLKQ+ IPH VLNA K AREA VA MAGR
Sbjct: 436 LVGTASVEKSELLSQLLKQRHIPHQVLNA--KQHAREAAVVA-------------MAGRK 480
Query: 394 TDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKA 453
+ + N M + ++I LG +S +A+A
Sbjct: 481 GAVTVATN--MAGRG-----------------------------TDIMLGGNS-EFIAQA 508
Query: 454 ALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTY 513
L AK + E D+ A +P+
Sbjct: 509 NLAAKGLDPKENA------------------------------DEYRAAWPI-------- 530
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L++ + E EV+ LGGL+V+G+ HESRRIDNQLRGR+GRQGDPG +RF +S+
Sbjct: 531 --ALEEADAAVQAEREEVRELGGLYVLGSERHESRRIDNQLRGRSGRQGDPGESRFYLSM 588
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+D++ + F++ A +++ ED+P+E + R + Q E F IRK+++++
Sbjct: 589 EDDLMR--LFNSGMAQRIMASGAYPEDLPLENKLVSRSIASAQHQVEARNFEIRKNVLKY 646
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII---FGNVDPLKHPRYWSL 690
D+V+ QR+ +YD R+ +L G E Q+ +M+++V II G + P + W L
Sbjct: 647 DDVMTNQRELIYDERRRVLEG--EDLEPQMKNFMRSLVTGIIDEKTGGISPAE----WDL 700
Query: 691 DKL 693
D L
Sbjct: 701 DVL 703
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER V+V T+D WR+HL M+ L + +R+ G R+PL EYK +G + F SM+
Sbjct: 769 MRDLERRVVVATVDRLWREHLYEMDYLKEGIGLRAMGQRDPLVEYKDEGAQMFQSMME-- 826
Query: 867 RRLTVESLVQYWSSPMESQELF 888
R+ ES+ Q +S + + F
Sbjct: 827 -RIKEESVQQVFSVSHQFERAF 847
>gi|357038236|ref|ZP_09100034.1| Protein translocase subunit secA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359811|gb|EHG07571.1| Protein translocase subunit secA [Desulfotomaculum gibsoniae DSM
7213]
Length = 875
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/437 (48%), Positives = 300/437 (68%), Gaps = 29/437 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEM+T VVTVNDYLA+RD+
Sbjct: 79 MRHFDVQLLGGIVLHNGKIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+++FLGLSVGLI G+ +ER+ +Y CDITY N+E GFDYLRDN+A ++QLV
Sbjct: 139 EWMGRIYKFLGLSVGLIVHGLSWDERKHSYNCDITYGTNNEFGFDYLRDNMALRAKQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG+A K Y A++ L + YTV+ K
Sbjct: 199 R---PLHYAIVDEVDSILIDEARTPLIISGQADKATDHYFTFARLVPRLQKDTDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++V LTEEG+ E L +L+D+ N + ALKA +RD Y+V++G+ +I
Sbjct: 256 AHTVVLTEEGVTRVEQMLGVENLYDDVNMQLTHHLNQALKAHALMKRDRDYVVKDGEVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG++++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 316 VDEFTGRMMFGRRYSDGLHQAIEAKEGVRVERESQTLATITFQNYFRMYDKLAGMTGTAE 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE++EF K++ + V+ +PTN P +R D + + K++ +E+ G+PVLVG
Sbjct: 376 TEQEEFRKIYNLDVVVIPTNKPMVREDRSDVVYKNEKAKFQAGVEEIAQKHATGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LSD+L+++G+PH VLNA KY +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEVLSDMLRRRGVPHQVLNA--KYHDKEAEIVAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDR 413
+LGGNP+ LA+ + R
Sbjct: 494 VLGGNPEFLAQAELRSR 510
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L+ + C++E V GGLH+IGT HESRRIDNQLRGR+GRQGDPGS++F S
Sbjct: 525 YQQLLEKYKQQCADEHRRVVEAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSQFFSS 584
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D + + ++ +ED+PIE + R + Q E FGIRK ++E
Sbjct: 585 LEDDLMRLFGSDNIAGI--MDKLGLEEDVPIEHGLVTRSIENAQKRVENRNFGIRKHVLE 642
Query: 633 FDEVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+D+V+ QR+ +Y R +L N + Q I +Q V+ V P + W L
Sbjct: 643 YDDVMNQQREVIYQQRMKVLLEENLKDVVLQMITDSVQRAVEVYAPDGVIPEE----WDL 698
Query: 691 DKLL 694
+ LL
Sbjct: 699 EGLL 702
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 779 NLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
++ R+ + D+L+ L +ES ++E+ERAVL++ +D W DHL M++L
Sbjct: 722 DMGREAIKDLLLEKSLAAYDARESELGAEVLRELERAVLLRMVDEKWMDHLDAMDQLREG 781
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +R++G +NPL EYK + + F +M+ A
Sbjct: 782 IGLRAYGQKNPLVEYKFESYQMFQNMVEA 810
>gi|167628823|ref|YP_001679322.1| preprotein translocase, seca subunit [Heliobacterium modesticaldum
Ice1]
gi|226732206|sp|B0TGY6.1|SECA_HELMI RecName: Full=Protein translocase subunit SecA
gi|167591563|gb|ABZ83311.1| preprotein translocase, seca subunit [Heliobacterium modesticaldum
Ice1]
Length = 843
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/422 (52%), Positives = 286/422 (67%), Gaps = 29/422 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 79 MRHFDVQLIGGMVLHQGRIAEMRTGEGKTLVATLPSYLNALTGRGVHVVTVNDYLAKRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+HRFLGL VGLI G+ ERR Y DITY N+E GFDYLRDN+ + +V
Sbjct: 139 EWMGRIHRFLGLQVGLIIHGLDFAERREAYAADITYGTNNEFGFDYLRDNMVIQPQHMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG+A+K +Y A++ L + + Y V+ K
Sbjct: 199 R---ELHYAIVDEVDSILIDEARTPLIISGQANKPTEKYYAVARIIPRLTKDVDYKVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+SV LTEEG++ E L ++L D D WA V LKA RRD Y+V++G+ +I+
Sbjct: 256 AHSVVLTEEGVSRVEKMLGIDNLADSLD-WAHHVNQGLKAHALMRRDRDYVVKDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEGL+IQ +S +A IT Q+ F++Y KLSGMTGTAKT
Sbjct: 315 DEFTGRLMFGRRYSEGLHQAIEAKEGLEIQNESQTLATITLQNYFRMYDKLSGMTGTAKT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF+++++M V+++PTN P R DLP + T GK+ +E+ FR G+PVLVG+
Sbjct: 375 EEPEFMQIYKMDVVQIPTNKPMQRKDLPDVVYRTEEGKFNAVVEEIVQSFRRGQPVLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SE LSD LK++G+PH VLNA K+ +EAE V AG++ +TI+TNMAGRGTDII
Sbjct: 435 VSIEKSEQLSDKLKRRGVPHQVLNA--KHHEKEAEIVKNAGQRGMVTIATNMAGRGTDII 492
Query: 398 LG 399
LG
Sbjct: 493 LG 494
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL+VIGT HE+RRIDNQLRGR+GRQGDPG TRF VSL+D++ + F +
Sbjct: 494 GEGVAELGGLYVIGTERHEARRIDNQLRGRSGRQGDPGQTRFYVSLEDDLMRLFGAENIQ 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + R+ D+ MPIE I R + Q E F IRK ++++D+V+ QR+ +YD
Sbjct: 554 GV--MDRLGMDDSMPIESGMITRAIENAQRRVEARNFDIRKHVLQYDDVMNQQREVIYDQ 611
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L G E+ +F ++ +V+ ++ K+ W L +L
Sbjct: 612 RKKVLNG--ENLRDTVFDFIDTLVENMVNRFAGEEKYVENWDLPAML 656
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER +L++ +D W DHL M+ L + +R++G ++PL EYK + F M+++
Sbjct: 704 IRELERIILLRVVDSHWMDHLDAMDHLRHGIGLRAYGQKDPLVEYKYEAYSMFQEMIASV 763
Query: 867 R 867
+
Sbjct: 764 Q 764
>gi|83589098|ref|YP_429107.1| preprotein translocase subunit SecA [Moorella thermoacetica ATCC
39073]
gi|123525170|sp|Q2RLX5.1|SECA_MOOTA RecName: Full=Protein translocase subunit SecA
gi|83572012|gb|ABC18564.1| protein translocase subunit secA [Moorella thermoacetica ATCC
39073]
Length = 896
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/432 (50%), Positives = 291/432 (67%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 80 MRHFDVQLMGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGL VGLI G+ ERR Y D+TY N+E GFDYLRDN+A + E++V
Sbjct: 140 EWMGRIYRFLGLKVGLIVHGLDAAERREAYNADVTYGTNNEFGFDYLRDNMALHPEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A K Y A + L + Y V+ K
Sbjct: 200 R---ELNYAIVDEVDSILIDEARTPLIISGMAEKPTEMYYTVAAIIPRLQPNIDYNVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
LTE G+A E L ++L+D+ N A V ALKA +RD Y+V++G+ +I
Sbjct: 257 AKVATLTEAGVAKVEKMLGVDNLYDDANMELAHHVNQALKAHTLMKRDRDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKIERESQTLATITFQNFFRMYDKLAGMTGTAA 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P IR D P + T +GK+E +E+ G+PVLVG
Sbjct: 377 TEEEEFRKIYNLDVVVIPTNKPMIRKDYPDVVYRTEKGKFEAVVEEIRERHAKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS++LK++GIPH VLNA KY +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSERLSEMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRLGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LAK+
Sbjct: 495 ILGGNPEALAKE 506
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF VSL+D++ + F D +
Sbjct: 558 VVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSLEDDLMRLFGSDNLTGI- 616
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+ R+ D+ PI+ + R L Q E + F IRK ++E+D+V+ QR+ +Y R+
Sbjct: 617 -LDRLGMDDSTPIDHPLVSRSLEQAQKKVEAHNFDIRKHVLEYDDVMNKQREIIYRQRRE 675
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+LTGA+ I ++ VVD+ + K+P W L LL
Sbjct: 676 VLTGAD--IRPTIEDMIKTVVDQTVDRFAGESKYPEEWDLAGLL 717
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER +L++ +D W DHL M++L + +R++G ++PL YK + + F M+++
Sbjct: 769 LREIERLILLRVVDTKWMDHLDAMDQLRQGIGLRAYGQQDPLVAYKFEAYQMFNDMIASI 828
Query: 867 RRLTVESLVQY 877
+ E +V+Y
Sbjct: 829 Q----EDVVRY 835
>gi|381162915|ref|ZP_09872145.1| preprotein translocase, SecA subunit, partial [Saccharomonospora
azurea NA-128]
gi|379254820|gb|EHY88746.1| preprotein translocase, SecA subunit, partial [Saccharomonospora
azurea NA-128]
Length = 870
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/463 (47%), Positives = 308/463 (66%), Gaps = 34/463 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT VVT NDYLAQRD+E
Sbjct: 103 RHYDVQLMGGAALHLGQVAEMKTGEGKTLTSLLPVYLNALPGKGVHVVTTNDYLAQRDSE 162
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +G+I+ + P ER+ Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 163 WMGRVHRFLGLEIGVIRSELTPAERKRAYAADITYGTNNEFGFDYLRDNMAWSLDDCVQR 222
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 223 ---GHYFAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARIAPLMKKDVHYEVDERK 279
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P F+ NALKAKE YR+D +YIVRNG+ LI+
Sbjct: 280 RAVGVTELGVEFVEDQLGIENLYEAANTPLVGFLNNALKAKELYRKDKEYIVRNGEVLIV 339
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 340 DEFTGRILAGRRFNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYEKLAGMTGTAET 399
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P +RVD + T K+E ++ G+PVLVG+
Sbjct: 400 EAAEFHQTYKLGVVPIPTNRPMVRVDQADLIYKTEEAKFEAVADDIAERHEKGQPVLVGT 459
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA+ + REA VAQAGR+ A+T++TNMAGRGTDI+
Sbjct: 460 TSVEKSEYLSKLLLKRGVPHEVLNAKQHH--REALIVAQAGRRGAVTVATNMAGRGTDIV 517
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
LGGNP ++A +++ DR L + + + + + PKVL E+
Sbjct: 518 LGGNPDIIADQVLRDRGL-----DPVENSEEYEAAWPKVLEEV 555
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ C E V GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL D
Sbjct: 551 VLEEVTAECKEEAEAVLEAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLGD 610
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + R + Q E+ IRK+++++DE
Sbjct: 611 ELMRRFNAAMVERVMTTMRLPD--DVPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDE 668
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDK 692
V+ QRK +Y R+ +L G N E I + A VD G + H + W+ K
Sbjct: 669 VMNQQRKVIYAERRRVLEGENLREQVENMITDVVSAYVDGATADGYAEDWDHAKLWTALK 728
Query: 693 LL 694
L
Sbjct: 729 TL 730
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 785 LGDILIASYLNVVQESRYD------DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVN 838
L +IL+A L + D + M+E+ER V++ LD WR+HL M+ L +
Sbjct: 752 LREILVADALRAYDQREADLDEKVAEGAMRELERRVVLSVLDRKWREHLYEMDYLKEGIG 811
Query: 839 VRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+R+ RNPL EY+ +G F +ML + + V
Sbjct: 812 LRAMAQRNPLVEYQREGFDMFNAMLDSLKEEAV 844
>gi|418461592|ref|ZP_13032662.1| preprotein translocase subunit SecA, partial [Saccharomonospora
azurea SZMC 14600]
gi|359738317|gb|EHK87207.1| preprotein translocase subunit SecA, partial [Saccharomonospora
azurea SZMC 14600]
Length = 859
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/463 (47%), Positives = 308/463 (66%), Gaps = 34/463 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT VVT NDYLAQRD+E
Sbjct: 103 RHYDVQLMGGAALHLGQVAEMKTGEGKTLTSLLPVYLNALPGKGVHVVTTNDYLAQRDSE 162
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +G+I+ + P ER+ Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 163 WMGRVHRFLGLEIGVIRSELTPAERKRAYAADITYGTNNEFGFDYLRDNMAWSLDDCVQR 222
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 223 ---GHYFAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARIAPLMKKDVHYEVDERK 279
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P F+ NALKAKE YR+D +YIVRNG+ LI+
Sbjct: 280 RAVGVTELGVEFVEDQLGIENLYEAANTPLVGFLNNALKAKELYRKDKEYIVRNGEVLIV 339
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 340 DEFTGRILAGRRFNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYEKLAGMTGTAET 399
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P +RVD + T K+E ++ G+PVLVG+
Sbjct: 400 EAAEFHQTYKLGVVPIPTNRPMVRVDQADLIYKTEEAKFEAVADDIAERHEKGQPVLVGT 459
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA+ + REA VAQAGR+ A+T++TNMAGRGTDI+
Sbjct: 460 TSVEKSEYLSKLLLKRGVPHEVLNAKQHH--REALIVAQAGRRGAVTVATNMAGRGTDIV 517
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEI 440
LGGNP ++A +++ DR L + + + + + PKVL E+
Sbjct: 518 LGGNPDIIADQVLRDRGL-----DPVENSEEYEAAWPKVLEEV 555
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ C E V GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL D
Sbjct: 551 VLEEVTAECKEEAEAVLEAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLGD 610
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + R + Q E+ IRK+++++DE
Sbjct: 611 ELMRRFNAAMVERVMTTMRLPD--DVPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDE 668
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDK 692
V+ QRK +Y R+ +L G N E I + A VD G + H + W+ K
Sbjct: 669 VMNQQRKVIYAERRRVLEGENLREQVENMITDVVSAYVDGATADGYAEDWDHAKLWTALK 728
Query: 693 LL 694
L
Sbjct: 729 TL 730
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 785 LGDILIASYLNVVQESRYD------DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVN 838
L +IL+A L + D + M+E+ER V++ LD WR+HL M+ L +
Sbjct: 752 LREILVADALRAYDQREADLDEKVAEGAMRELERRVVLSVLDRKWREHLYEMDYLKEGIG 811
Query: 839 VRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQE 886
+R+ RNPL EY+ +G F +ML + + V + E QE
Sbjct: 812 LRAMAQRNPLVEYQREGFDMFNAMLDSLKEEAVGLMFNLQVQQAEQQE 859
>gi|414153364|ref|ZP_11409691.1| Protein translocase subunit SecA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455746|emb|CCO07594.1| Protein translocase subunit SecA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 871
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/430 (51%), Positives = 295/430 (68%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH G IAEMKT VVTVNDYLA RD+
Sbjct: 79 MRHYDVQLIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALTGRGVHVVTVNDYLATRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVGLI G+ E+RR Y DITY N+E GFDYLRDN+A + EQLV
Sbjct: 139 QWMGQIYNFLGLSVGLIVHGLDWEQRRQAYNADITYGTNNEFGFDYLRDNMALHPEQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG A K Y A++ LVQ YTV+ K
Sbjct: 199 R---ELHYAIVDEVDSILIDEARTPLIISGMADKPTDLYYTMARIVPKLVQDTDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
++V LTEEG++ AE L +L+D+++ +N ALKA +RD Y+V++G+ +I
Sbjct: 256 AHTVLLTEEGVSKAEKLLGVPNLYDDSNLELTHHLNQALKAHALMKRDRDYVVKDGEVVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRMYKKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P IR D+P + T K+ +E+ G+PVLVG
Sbjct: 376 TEEEEFRKIYGLDVVVIPTNKPMIRNDMPDLVYKTKEAKYRAVVEEIVRRHATGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++G+PH VLNA KY +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIETSELLSSMLKKKGVPHQVLNA--KYHEKEAEIIAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
+LGGNP++LA
Sbjct: 494 LLGGNPEILA 503
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 12/187 (6%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
Y +++ + C E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +
Sbjct: 520 AYQALVAKYKQQCEEERRQVVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYI 579
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D++ + F D L+ ++ +ED+PIE I + + Q E F IRK ++
Sbjct: 580 SLEDDLMRLFGSDN--IAGLMEKLGMEEDVPIEHALITKSIETAQKRVENRNFDIRKHVL 637
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL----KHPRY 687
+D+V+ QR+ +Y R+ +LTG N I +Q + +++ +VD H
Sbjct: 638 NYDDVMNQQRELIYSQRRQVLTGQN------IADNIQETIAKVVARSVDAYCPEGVHQEE 691
Query: 688 WSLDKLL 694
W L LL
Sbjct: 692 WDLAGLL 698
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M+E+ER VL++ +D W DHL M++L + +R++G ++PL EYK + F +M++
Sbjct: 748 MREIERVVLLRLVDEKWMDHLDAMDQLREGIGLRAYGQKDPLIEYKFEAYEMFNNMIA 805
>gi|78044472|ref|YP_359034.1| preprotein translocase subunit SecA [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577136|sp|Q3AFQ0.1|SECA_CARHZ RecName: Full=Protein translocase subunit SecA
gi|77996587|gb|ABB15486.1| preprotein translocase, SecA subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 874
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 298/430 (69%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEMKT +VTVNDYLA+RDA
Sbjct: 79 MRHFDVQLMGGIVLHEGKIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++++FLGLSVGL+ GM E+++ Y DITY N+E GFDYLRDN+A + +Q+V
Sbjct: 139 EWMGKIYKFLGLSVGLVVHGMDYAEKKAAYLADITYGTNNEFGFDYLRDNMAIHPDQVVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISGEA K Y AK+ + LV G YTV+ K
Sbjct: 199 R---ELYYAIIDEVDSILIDEARTPLIISGEAEKSTDLYYTFAKIVKQLVPGEDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++V TE GI E L +L+ DE+ + ALKA+ +RD Y+V++G+ +I
Sbjct: 256 AHAVMPTEAGIHKVEKMLGIQNLYADEHMELTHHLNAALKAQALMKRDRDYVVKDGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ ++ +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEQETQTLATITFQNYFRMYEKLAGMTGTAE 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++ + V+ +PT+ P IR DLP F T + K++ +EV + G+P+L+G
Sbjct: 376 TEENEFRKIYNLSVVVIPTHKPMIRKDLPDVIFKTEKAKFKAIVEEVARRHQTGQPILIG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS++LK++GIPH VLNA KY +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEMLSEMLKKRGIPHQVLNA--KYHEKEAEIVAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
+LGGNP+ LA
Sbjct: 494 LLGGNPEFLA 503
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 104/183 (56%), Gaps = 4/183 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L + E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S
Sbjct: 521 YRELLAKYKKITDEEHKKVVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFIS 580
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D L+ R+ DED PIE I R + Q E F IRK ++E
Sbjct: 581 LEDDLMRLFGSDN--IAGLMDRLGLDEDTPIEHPLITRSIETAQKRVENRNFEIRKHVLE 638
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D V+ QR+ +Y R+ +L G E + Q ++AVV+ + HP W L
Sbjct: 639 YDNVMNQQRELIYSQRRRVLFG--EDVLTFVHQMIEAVVERAVDTYCPDGVHPEEWDLKG 696
Query: 693 LLK 695
LL+
Sbjct: 697 LLE 699
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 46/70 (65%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER V+++ +D W DHL M++L + +R++G ++PL EYKI+ F +M++A
Sbjct: 748 LRELERYVILRVVDEKWMDHLDAMDQLREGIGLRAYGQKDPLVEYKIESVEMFNNMIAAI 807
Query: 867 RRLTVESLVQ 876
+ V L++
Sbjct: 808 QEDVVRYLMR 817
>gi|323703030|ref|ZP_08114686.1| preprotein translocase, SecA subunit [Desulfotomaculum nigrificans
DSM 574]
gi|333924708|ref|YP_004498288.1| protein translocase subunit secA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532043|gb|EGB21926.1| preprotein translocase, SecA subunit [Desulfotomaculum nigrificans
DSM 574]
gi|333750269|gb|AEF95376.1| Protein translocase subunit secA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 873
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/431 (51%), Positives = 293/431 (67%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH+G IAEMKT VVTVNDYLA RD+
Sbjct: 79 MRHFDVQLIGGAVLHEGRIAEMKTGEGKTLVATLPVYLNALTGRGVHVVTVNDYLATRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLSVGLI G+ EERR Y DITY N+E GFDYLRDN+A + EQLV
Sbjct: 139 EWMGQLYNFLGLSVGLIVHGLDWEERRRAYNADITYGTNNEFGFDYLRDNMALHPEQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+A K Y A++ L + YTV+ K
Sbjct: 199 R---ELNYAIVDEVDSILIDEARTPLIISGQADKPTDLYYTMARIVPRLTKDTDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LTEEG+A E L +L+D+ N + ALKA +RD Y+V++G+ +I
Sbjct: 256 AHTALLTEEGVAKVEKMLGVANLYDDANMELTHHLNQALKAHALMKRDRDYVVKDGEVVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRMYKKLAGMTGTAV 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + VI +PTN P IR DLP + T K+ ++V G+PVLVG
Sbjct: 376 TEEEEFRKIYGLDVIVIPTNRPMIRQDLPDLVYKTEAAKFRAVVEDVAKRHATGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S +LK++GIPH VLNA KY +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSELVSGMLKRKGIPHQVLNA--KYHEKEAEIIAQAGRLNAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAK 407
+LGGNP+ LA+
Sbjct: 494 LLGGNPEALAQ 504
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
G Y +L + C E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPG
Sbjct: 514 GEEAEAEYQRLLAQYKKQCEEEREKVVALGGLHIIGTERHESRRIDNQLRGRAGRQGDPG 573
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
S++F +SL+D++ + F D L+ R+ +ED+PIE I + + Q E F
Sbjct: 574 SSQFYISLEDDLMRLFGSDN--IAGLMDRLGMEEDVPIEHSLITKSIESAQKRVENRNFD 631
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRK ++ +D+V+ QR+ +Y+ R+ +LTG E+ ++ I + VV + H
Sbjct: 632 IRKHVLNYDDVMNQQRELIYEQRRRVLTG--ENMAEHIKDTIATVVGRSVDMYAPEGVHQ 689
Query: 686 RYWSLDKLLK 695
W L LL+
Sbjct: 690 EEWDLAGLLE 699
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER V+++ +D W DHL M++L + +R++G ++PL EYK + F +M+++
Sbjct: 748 LREIERVVMLRLVDEKWMDHLDAMDQLREGIGLRAYGQKDPLIEYKFEAYEMFNNMIASI 807
Query: 867 RRLTVESLVQY 877
+ E +V+Y
Sbjct: 808 Q----EDVVRY 814
>gi|158321506|ref|YP_001514013.1| preprotein translocase subunit SecA [Alkaliphilus oremlandii
OhILAs]
gi|172048245|sp|A8MJN5.1|SECA_ALKOO RecName: Full=Protein translocase subunit SecA
gi|158141705|gb|ABW20017.1| preprotein translocase, SecA subunit [Alkaliphilus oremlandii
OhILAs]
Length = 890
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 291/432 (67%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ+ GG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 80 MKHYRVQLYGGMVLHQGRIAEMRTGEGKTLMATLPVYLNALSGKGVHVVTVNDYLAKRDQ 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGL+VG+I G+ E+RR Y CDITY N+E GFDYLRDN+ + ++V
Sbjct: 140 EWMSKVYNFLGLTVGVIVHGITNEDRRKAYHCDITYGTNNEFGFDYLRDNMVIHLHEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG+ K Y + + + L + + + V+ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGQGDKSTKMYFIVDQFVKTLKKEVDFEVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
NSV LTEEG+ AE ++L D EN A + ALKA + D Y+V++G+ +I
Sbjct: 257 ANSVTLTEEGVERAEKYFAVDNLSDMENTELAHHINQALKANNLMKLDKDYVVKDGEIII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDDFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYDKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF+ ++ M V+E+PTN P +R+D P + + +GK +++E + G+PVLVG
Sbjct: 377 TEEDEFISIYNMDVVEIPTNKPVVRIDEPDSVYKSEKGKVLSIIKDIEEKHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE L+ LK++GIPH VLNA K REAE +AQAGRK +TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEELAAALKKKGIPHEVLNA--KQHEREAEIIAQAGRKGIVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ LAK+
Sbjct: 495 LLGGNPEFLAKR 506
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 97/163 (59%), Gaps = 4/163 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y + K + E EVK +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +S
Sbjct: 539 YEELYKRFKAETDREHEEVKAVGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + + + ++ ED IE + + Q E FGIRK +++
Sbjct: 599 LEDDLMRLFGGERMLGI--VDKMGLAEDEAIEHRLLTNSIENAQKKVEGRNFGIRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+D+V+ QR+ +Y R+ +L G E+ IF M +VDE I
Sbjct: 657 YDDVMNKQREVIYGERKKVLEG--ENMRDHIFSLMANIVDESI 697
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
V+E M+E+ER +L++ +D W DH+ M++L + +R+ G +P+ Y+++G
Sbjct: 755 VKEEEIGSERMREIERVILLQVIDTKWMDHIDAMDQLRQGIGLRAIGQVDPVRAYQLEGY 814
Query: 857 RFFISMLSATRRLTVESL 874
F M+++ + TV L
Sbjct: 815 DMFQEMINSIQEDTVRFL 832
>gi|134102876|ref|YP_001108537.1| preprotein translocase subunit SecA [Saccharopolyspora erythraea
NRRL 2338]
gi|291009679|ref|ZP_06567652.1| preprotein translocase subunit SecA [Saccharopolyspora erythraea
NRRL 2338]
gi|166918857|sp|A4FNI7.1|SECA_SACEN RecName: Full=Protein translocase subunit SecA
gi|133915499|emb|CAM05612.1| preprotein translocase SecA subunit [Saccharopolyspora erythraea
NRRL 2338]
Length = 953
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/438 (50%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G IAEMKT VVTVNDYLA+RDA+
Sbjct: 79 RHFDVQLMGGAALHLGQIAEMKTGEGKTLTCVLPAYLNAIAGRGVHVVTVNDYLAKRDAD 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG I M PE+RR Y DITY N+E GFDYLRDN+A + V R
Sbjct: 139 WMGRVHRFLGLEVGAIMADMTPEQRRHAYAADITYGTNNEFGFDYLRDNMAWSLADCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
F+IVDEVDS+LIDE R PL+ISG A + Y A++A +L + HY V+ +
Sbjct: 199 G---HFFSIVDEVDSILIDEARTPLIISGPADQSSRWYQEFARLAPMLKKDQHYEVDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE+G+ + E L +L++ N P ++ NALKAKE Y+RD YIVRNG+ +I+
Sbjct: 256 RTVGVTEDGVTIIEDQLGIENLYEAANTPLVGYLNNALKAKELYKRDKDYIVRNGEVVIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DEFTGRILHGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYEKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ V+ +PTN P R D P + + K+E +++E R G+PVLVG+
Sbjct: 376 EAAEFNGTYKLGVVPIPTNRPMARADQPDLVYKSEVAKFEAVAEDIEEKHRKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYL+ LL ++G+PHNVLNA KY EA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVERSEYLAKLLVKKGVPHNVLNA--KYHQSEAAIIAEAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA + R L
Sbjct: 494 LGGNVDHLADAELRKRGL 511
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 93/142 (65%), Gaps = 4/142 (2%)
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLIS 593
LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ + +++
Sbjct: 545 LGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNAAMVETVMT 602
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
R+ +D+PIE + R + Q E+ IRK+++++DEV+ QR +YD R+ +L
Sbjct: 603 RLKVPDDVPIEHKMVTRAIRSAQTQVEQQNMEIRKNVLKYDEVMNQQRSVIYDERRRVLE 662
Query: 654 GANESCSQQIFQYMQAVVDEII 675
G E +Q+ ++ VV E +
Sbjct: 663 G--EDLQEQVRHMIRDVVTEYV 682
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML A
Sbjct: 756 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYRREGFDMFHAMLDAL 815
Query: 867 RRLTV 871
+ +V
Sbjct: 816 KEESV 820
>gi|357022835|ref|ZP_09085057.1| preprotein translocase subunit SecA [Mycobacterium
thermoresistibile ATCC 19527]
gi|356477456|gb|EHI10602.1| preprotein translocase subunit SecA [Mycobacterium
thermoresistibile ATCC 19527]
Length = 942
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/439 (49%), Positives = 298/439 (67%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPAYLNALTGKGVHIVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I GM P++RR+ Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLEVGVILSGMTPDQRRAAYNADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGLHYTVELK 157
H+AIVDEVDS+LIDE R PL+ISG A + V A++A L+ + +HY V+L+
Sbjct: 198 G---HHYAIVDEVDSILIDEARTPLIISGPADSGATNWYVEFARIAPLMQKDVHYEVDLR 254
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI
Sbjct: 255 KRTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRNGEVLI 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+
Sbjct: 315 VDEFTGRVLVGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAE 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE E +++++ V+ +PTN P IR D + T K+ ++ ++ G+PVLVG
Sbjct: 375 TEAAELHEIYKLGVVPIPTNKPMIREDRADLIYKTEEAKFLAVADDIAERYQKGQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SEYLS LL ++ IPHNVLNA KY +EA +A+AGR+ A+T++TNMAGRGTDI
Sbjct: 435 TTSVERSEYLSRLLTKRRIPHNVLNA--KYHEQEAAIIAEAGRRGAVTVATNMAGRGTDI 492
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGNP L K + ++ L
Sbjct: 493 VLGGNPDFLTDKRLREQGL 511
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 181/377 (48%), Gaps = 71/377 (18%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L + C+ E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 527 LLPKVKAECAREAQEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T A L++R+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 587 ELMRRFNGATLEA--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QRK +Y R+ IL G E+ +Q +V ++I VD Y W L++
Sbjct: 645 VMNQQRKVIYAERRRILEG--ENLREQALD----MVRDVITAYVDGATAEGYAEDWDLEQ 698
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
L T L+ + + SID ++ D P
Sbjct: 699 LW---------------------TALRQLYPI----SIDHHDLIDSDAVGEPG------- 726
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV----YMK 808
DLT++ LL+ L D A +E+ D++ M+
Sbjct: 727 --------------DLTRD-------ELLQVLLED---AERAYAKREAEIDELAGEGAMR 762
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML +
Sbjct: 763 QLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVAMLEGLKE 822
Query: 869 LTVESLVQYWSSPMESQ 885
V L P+ Q
Sbjct: 823 ECVGFLFNVAVEPVAPQ 839
>gi|337286644|ref|YP_004626117.1| preprotein translocase subunit SecA [Thermodesulfatator indicus DSM
15286]
gi|335359472|gb|AEH45153.1| preprotein translocase, SecA subunit [Thermodesulfatator indicus
DSM 15286]
Length = 918
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/434 (50%), Positives = 292/434 (67%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH+G IAEMKT +VTVNDYLA+RDA
Sbjct: 81 MRHYDVQLMGGIVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHIVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM ++ FLGLSVG+I GM EER+ Y DITY N+E GFDYLRDN+ + E +V
Sbjct: 141 KWMGTLYNFLGLSVGVIVSGMNEEERKRAYASDITYGTNNEFGFDYLRDNMKFSLEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + Y K+ L + +H+T++ K
Sbjct: 201 R---EHHYAIVDEVDSILIDEARTPLIISGPSEESTEIYYHIDKLVRHLKKDVHFTLDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
S LTEEG+A E L +L+D + AL+A + RDV YIV++GK +I
Sbjct: 258 TKSAMLTEEGVAEMERLLGVENLYDPRHISLVHHINQALRAHHLFHRDVDYIVKDGKVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQA+EAKEG+KI+ ++ +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 318 VDEFTGRLMPGRRWSDGLHQAIEAKEGVKIEKENQTLATITFQNYFRMYEKLAGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V+ +PT+ P IRVD P + T R K+ +E+E + R GRPVLVG
Sbjct: 378 TEAAEFKEIYNLDVVVIPTHKPMIRVDHPDVVYRTKREKFNAVVEEIEELHREGRPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ENSE LS LLK++ IPH VLNA KY REA +AQAGR A+TI+TNMAGRG DI
Sbjct: 438 TTSIENSEILSGLLKKKKIPHQVLNA--KYHEREAAIIAQAGRSGAVTIATNMAGRGVDI 495
Query: 397 ILGGNPKMLAKKII 410
+LGGNP+ LAK+ +
Sbjct: 496 LLGGNPEGLAKETL 509
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 15/193 (7%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C + VK LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F
Sbjct: 556 CQEDYERVKALGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLLRLFGS 615
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D + + R+ +E PIE + + + Q E ++F IRK L+E+D+V+ QR+
Sbjct: 616 DKLRGI--MDRLGIEEGEPIEHPFVSKAIEQAQKKVEAHHFEIRKHLLEYDDVMNKQREV 673
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH----PRYWSLDKLLKEFIA 699
+Y R+ IL S I ++ +V ++ G V+ + P W L+ L F+
Sbjct: 674 IYSQRKEIL------ASDNIRDWITDMVRDVCEGIVEEYREEKGSPVDWDLEGLKDRFMG 727
Query: 700 IAG---KILDDLF 709
+ G +I +DL
Sbjct: 728 VFGFRPEIKEDLL 740
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER L+ T+D W++HL+ M+ L + +R + +NPL+EYK + F ++
Sbjct: 769 MRQLERMFLLHTIDSLWKEHLLAMDHLREGIGLRGYAQQNPLQEYKREAFAMFSDLIERI 828
Query: 867 RRLTVESL 874
+ T+ L
Sbjct: 829 KEQTLSFL 836
>gi|147679088|ref|YP_001213303.1| preprotein translocase subunit SecA [Pelotomaculum
thermopropionicum SI]
gi|189046171|sp|A5CYJ1.1|SECA_PELTS RecName: Full=Protein translocase subunit SecA
gi|146275185|dbj|BAF60934.1| preprotein translocase subunit SecA [Pelotomaculum
thermopropionicum SI]
Length = 886
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/431 (50%), Positives = 297/431 (68%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 79 MRHFDVQLMGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+++LGLSVGLI G+ EER+ +YR D+TY N+E GFDYLRDN+A + +QLV
Sbjct: 139 EWMGQVYKYLGLSVGLIVHGLDWEERKRSYRADVTYGTNNEFGFDYLRDNMALHPDQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+A K Y A++ LV + Y V+ K
Sbjct: 199 R---ELNYAIVDEVDSILIDEARTPLIISGQAEKSTDLYYTFARIVPRLVPEVDYNVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++V +TE G+A E L +L+D+ N + ALKA +RD Y+V++G+ +I
Sbjct: 256 AHTVVITETGVAKVEKMLGVENLYDDRNIELTHHLNQALKAHALMKRDRDYVVKDGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRMYRKLAGMTGTAA 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P IR DLP + T + K+ +E+ + G+PVLVG
Sbjct: 376 TEEQEFKKIYGLDVVVIPTNKPMIRKDLPDVIYKTEQAKFRAVVEEIAARHARGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEMLSGMLKKRGIPHQVLNA--KYHDKEAEIVAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAK 407
+LGGNP+ LA+
Sbjct: 494 LLGGNPEFLAR 504
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 9/187 (4%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V LGGLH+IGT HESRRIDNQLRGR GRQGDPGS++F SL+D++ + F + +
Sbjct: 549 VVELGGLHIIGTERHESRRIDNQLRGRCGRQGDPGSSQFFSSLEDDLMRLFGSENIAGI- 607
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+ R+ DEDMPIE I + + Q E F IRK ++++D+V+ QR+ +Y R+
Sbjct: 608 -MDRLGIDEDMPIEHAMITKSIEAAQKRVENRNFDIRKHVLQYDDVMNQQRELIYRQRRQ 666
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE----FIAIAGKILD 706
+LTG E+ + + + + V+ + HP W L LL+ F+ G
Sbjct: 667 VLTG--ENLKENVLEMIGTCVERAVNTYAPEGVHPEEWDLKGLLEHAEHLFLPGHGLTAG 724
Query: 707 DLFAGIS 713
DL AG+S
Sbjct: 725 DL-AGMS 730
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 41/59 (69%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E+ER ++++ +D W DHL M++L + +R++G ++PL EYK +G F +M+++
Sbjct: 758 MREIERVIMLRIVDEKWMDHLDAMDQLREGIGLRAYGQKDPLVEYKFEGYEMFQNMIAS 816
>gi|86739480|ref|YP_479880.1| preprotein translocase subunit SecA [Frankia sp. CcI3]
gi|123751455|sp|Q2JEZ1.1|SECA_FRASC RecName: Full=Protein translocase subunit SecA
gi|86566342|gb|ABD10151.1| protein translocase subunit secA [Frankia sp. CcI3]
Length = 994
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/438 (50%), Positives = 295/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT V+TVNDYLAQRDAE
Sbjct: 80 RHFDVQIMGGAALHLGNIAEMKTGEGKTLVSTLPTYLNALAGKGVHVITVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I M P RR+ Y CDITY N+E GFDYLRDN+A +SE+LV R
Sbjct: 140 NMGRVHRFLGLTVGVIHPQMPPPVRRAQYACDITYGTNNEFGFDYLRDNMAWSSEELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + + Y VE
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPADHPTRWYTEFARIAPLLERDVDYEVEEGK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P ++ N+LKAKE Y+RD YIV +G+ LI+
Sbjct: 257 RTVAITESGVEKVEDQLGIENLYESVNTPLVGYLNNSLKAKELYKRDKDYIVTDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEFTGRVLHGRRYSEGMHQAIEAKEKVEIKQENQTLATITLQNYFRLYDKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ + V+ +PTN P +R+D P + T K++ +++ G+PVLVG+
Sbjct: 377 EAAEFHQIYSLGVVPIPTNKPMVRLDQPDVVYKTEIAKFDAVVEDIAERHEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L+++G+PH VLNA K+ REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKQLRKRGVPHEVLNA--KHHEREAAIIAEAGRKGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 495 LGGNPEFIAQAELRQRGL 512
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 126/233 (54%), Gaps = 14/233 (6%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D++ + F+ +
Sbjct: 539 EHEEVVDAGGLYVLGTERHESRRIDNQLRGRAGRQGDRGESRFYLSLGDDLMRLFN---A 595
Query: 587 WAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
AV+ ++ R+ ED+PIE + R + Q E F IRK+++++DEV+ QR +Y
Sbjct: 596 AAVEGIMDRLNIPEDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYDEVMNKQRTVIY 655
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF-----IAI 700
+ R+ +L GA+ +Q+ ++ V+ + G +P W LD L + +
Sbjct: 656 EERRKVLGGAD--LHEQVRHFVDDTVEGYVRGATAD-GYPEEWDLDTLWTALGQLYPVGV 712
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRK 753
+DD G++ D LL+ I ++ + D D P + R + R+
Sbjct: 713 VAPDVDDR-DGLTADHLLEDI-QVDAQEAYDRRELDLGDGPDSEPIMRELERR 763
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ G R+PL EY+ +G F +M+
Sbjct: 757 MRELERRVVLAVLDRKWREHLYEMDYLQEGIGLRAMGQRDPLVEYQREGFDMFQTMMEGI 816
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 817 KEESVRLL 824
>gi|383830531|ref|ZP_09985620.1| preprotein translocase, SecA subunit [Saccharomonospora
xinjiangensis XJ-54]
gi|383463184|gb|EID55274.1| preprotein translocase, SecA subunit [Saccharomonospora
xinjiangensis XJ-54]
Length = 977
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 298/438 (68%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEM+T VVT NDYLAQRD+E
Sbjct: 103 RHYDVQLMGGAALHLGQVAEMRTGEGKTLTSLLPVYLNALSGKGVHVVTTNDYLAQRDSE 162
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +G+I+ + P ER++ Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 163 WMGRVHRFLGLEIGVIRSDLSPAERKAAYAADITYGTNNEFGFDYLRDNMAWSLDDCVQR 222
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 223 G---HNFAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARMAPLMKKDVHYEVDERK 279
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L ++L++ N P F+ NALKAKE YR+D +YIVR G+ LI+
Sbjct: 280 RAVGVTEVGVEFVEDQLGIDNLYEAANTPLVGFLNNALKAKELYRKDKEYIVRGGEVLIV 339
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 340 DEFTGRILAGRRFNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 399
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + + + V+ +PTN P +RVD + T K+E ++ G+PVLVG+
Sbjct: 400 EAAEFHQTYNLGVVPIPTNRPMVRVDQADLIYKTEEAKFEAVADDIAERHEKGQPVLVGT 459
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA+ + REA VA+AGRK A+T++TNMAGRGTDI+
Sbjct: 460 TSVEKSEYLSKLLLKRGVPHEVLNAKQHH--REALIVAKAGRKGAVTVATNMAGRGTDIV 517
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A +++ +R L
Sbjct: 518 LGGNPDIIADEVLRERGL 535
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL DE+ ++F+ V R
Sbjct: 570 GGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLGDELMRRFNAAMVERVMTTMR 629
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + D+PIE + R + Q E+ IRK+++++DEV+ QRK +Y R+ +L G
Sbjct: 630 LPD--DVPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDEVMNEQRKVIYAERRRVLEG 687
Query: 655 AN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDKLL 694
N + I + A VD G + H + W+ K L
Sbjct: 688 ENLRDQLEHMIADVVAAYVDGATADGYAEDWDHAKLWTALKTL 730
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ RNPL EY+ +G F +ML +
Sbjct: 780 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRNPLVEYQREGFDMFNAMLDSL 839
Query: 867 R 867
+
Sbjct: 840 K 840
>gi|333980675|ref|YP_004518620.1| protein translocase subunit secA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824156|gb|AEG16819.1| Protein translocase subunit secA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 879
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/431 (50%), Positives = 294/431 (68%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 79 MRHFDVQLMGGIVLHQGKIAEMKTGEGKTLVATLPVYLNALTGRGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGL+VGLI G+ ERR Y D+TY N+E GFDYLRDN+A + +QLV
Sbjct: 139 EWMGRIYRFLGLTVGLIVHGLDTAERRRAYAADVTYGTNNEFGFDYLRDNMAIHPDQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +AIVDEVDS+LIDE R PL+ISG+A + Y A++ L + + YTV+ K
Sbjct: 199 R---ELFYAIVDEVDSILIDEARTPLIISGQADRATDLYYTFARLVPRLQRDVDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
++V LTEEG+A E L +L+D+ +N ALKA +RD Y+V++G+ +I
Sbjct: 256 AHTVTLTEEGVARVEKMLGVENLYDDQHMQLTHHLNQALKAHALMKRDRDYVVKDGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG++++ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVRVERESQTLATITFQNYFRMYEKLAGMTGTAA 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE++EF K++ + V+ +PT+ P IR DLP + T R K+ +E+ G+PVLVG
Sbjct: 376 TEQEEFRKIYGLDVVVIPTHKPMIRRDLPDVVYKTERAKFRAVVEEIARRHATGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEILSQMLKKRGIPHQVLNA--KYHEKEAEIVAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAK 407
+LGGNP+ LA+
Sbjct: 494 LLGGNPEFLAQ 504
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 8/190 (4%)
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
P V Y + L+ E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS
Sbjct: 519 PRVQELYRATLEKYRKITDEEHKKVVALGGLHIIGTERHESRRIDNQLRGRAGRQGDPGS 578
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
++F +SL+D++ + F + + + R+ +EDMPIE + + + Q E F I
Sbjct: 579 SQFFISLEDDLMRLFGSENIAGI--MDRLGIEEDMPIEHGLVTKSIETAQKRVENRNFDI 636
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
RK ++++D+V+ QR+ +Y R+ +L G N E Q I Q ++ VD V H
Sbjct: 637 RKHVLQYDDVMNQQREVIYRQRRQVLMGENLKEVVLQTIAQTVERAVDTYCPEGV----H 692
Query: 685 PRYWSLDKLL 694
W L LL
Sbjct: 693 EEEWDLVGLL 702
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
+D W DHL M++L + +R++G ++PL EYK + F +M+++ + E LV+Y
Sbjct: 764 VDEKWMDHLDAMDQLREGIGLRAYGQKDPLVEYKFEAYEMFQNMIASIQ----EDLVRY 818
>gi|30468107|ref|NP_848994.1| preprotein translocase subunit SecA [Cyanidioschyzon merolae strain
10D]
gi|75298610|sp|Q85G35.1|SECA_CYAME RecName: Full=Protein translocase subunit SecA
gi|30409207|dbj|BAC76156.1| preprotein translocase subunit (chloroplast) [Cyanidioschyzon
merolae strain 10D]
Length = 774
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/433 (48%), Positives = 289/433 (66%), Gaps = 26/433 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+DVQ+IG VL+ G IAEMKT +VTVNDYLA+RD W+
Sbjct: 63 YDVQLIGAMVLNKGQIAEMKTGEGKSLVAAFASYLNALSGKGVHIVTVNDYLAKRDERWI 122
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
V R+LGL +I EER+ Y D+TY NSELGFDYLRD++A + E++V R
Sbjct: 123 GEVLRYLGLKTAVITNESSREERKKGYEADVTYITNSELGFDYLRDHMAWSKEEIVQR-- 180
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
F++ I+DEVDS+LIDE R PL+ISG Y VA ++ + + +G Y +E K+
Sbjct: 181 -EFNYCIIDEVDSILIDEARTPLIISGPTKGSEKPYKVAWEIGKRMKEGEDYELEEKSKQ 239
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINEL 220
V L E+GI E ALE D++ PWA +VMNA+KAK FY +DV YI++ G+ +I++E
Sbjct: 240 VILKEKGIKRCEEALEVKDIFSMETPWAHYVMNAIKAKHFYIKDVNYIIKEGEVVIVDEF 299
Query: 221 TGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEK 280
TGR+ RRW++G+HQA+EAKEG+KIQ +S +A ITYQ+LF LYPKL+GMTGTAKTEE+
Sbjct: 300 TGRIMGGRRWADGLHQAIEAKEGVKIQEESETLASITYQNLFLLYPKLAGMTGTAKTEEE 359
Query: 281 EFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSV 340
EF +++ + V+ +PT+ R D P + T+R KW +E E M+ GRPVLVG+TS+
Sbjct: 360 EFEQIYGLKVVSIPTHRKMKRKDYPDVVYRTSRSKWMAVAEECERMWTKGRPVLVGTTSI 419
Query: 341 ENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGG 400
E SE L+ LL+++G+ + +LNARP AA EA +AQAG+ +ITI+TNMAGRGTDIILGG
Sbjct: 420 EKSELLARLLEEKGVKYKLLNARPSLAADEASIIAQAGKIGSITIATNMAGRGTDIILGG 479
Query: 401 NPKMLAKKIIEDR 413
N K + I++R
Sbjct: 480 NIKEAFGEWIKER 492
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
Query: 526 NEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDT 585
E VK+LGGL+VIGT HESRRIDNQLRGR+GRQGD GS+RF +SL+D++ + F
Sbjct: 527 KEQKRVKQLGGLYVIGTERHESRRIDNQLRGRSGRQGDEGSSRFFISLEDDLLR--IFGG 584
Query: 586 SWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
+++SR+ +E P+E + + L Q E YY+ +RK L E+D+VL QRK +Y
Sbjct: 585 GQMGEIMSRLGVEE--PLESAFLSKSLDRAQKKVENYYYQMRKQLFEYDQVLNSQRKAIY 642
Query: 646 DLRQSIL 652
R IL
Sbjct: 643 KERTDIL 649
>gi|296134257|ref|YP_003641504.1| Preprotein translocase subunit SecA [Thermincola potens JR]
gi|296032835|gb|ADG83603.1| preprotein translocase, SecA subunit [Thermincola potens JR]
Length = 876
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/430 (51%), Positives = 293/430 (68%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT V+TVNDYLA RD+
Sbjct: 79 MRHFDVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGRGVHVITVNDYLATRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+++FLGLSVGLI G ++++ Y DI Y N+E GFDYLRDN+A + EQLV
Sbjct: 139 EWMGRIYKFLGLSVGLIVHGQDYAQKKAAYNADIIYGTNNEFGFDYLRDNMALSKEQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+A K Y V AK+ LV+ YTV+ K
Sbjct: 199 R---DLYYAIVDEVDSILIDEARTPLIISGQADKATDLYYVMAKIVPKLVKDEDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
+ V LTE GIA AE L ++L+D++ +N ALKA +RD Y+V++G+ +I
Sbjct: 256 AHIVTLTESGIAKAEKMLGVDNLYDDDKIELTHHLNQALKAHALMKRDRDYVVKDGEVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKIERESQTLATITFQNYFRMYEKLAGMTGTAV 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P IR DLP + T K+ +E+ G+PVLVG
Sbjct: 376 TEEEEFRKIYGLDVVVIPTNKPMIRKDLPDAIYKTEAAKFRAVVEEIAERHAKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GI HNVLNA KY +EA+ +AQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEELSQMLKRKGIKHNVLNA--KYHEKEADIIAQAGRLGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
+LGGNP+ LA
Sbjct: 494 LLGGNPEYLA 503
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
T+ +++ + E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGSTRF +
Sbjct: 520 TFAQLVEKYKKITDEEHRKVVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTRFYI 579
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D++ + F D L+ ++ +ED+PIE I R + Q E F IRK ++
Sbjct: 580 SLEDDLMRLFGSDNISG--LMDKLGMEEDVPIEHPIITRSIEAAQKRVENRNFDIRKHVL 637
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD 691
E+D+V+ QR+ +Y+ R+ +L G E+ + I Q ++ ++D + + HP W L+
Sbjct: 638 EYDDVMNKQREVIYEQRRRVLVG--ENLKETIIQMIETLIDGALDVYCNKGVHPEEWDLE 695
Query: 692 KLLK 695
LL+
Sbjct: 696 GLLR 699
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
++E+ERAVL++ +D W DHL M++L + +R++G ++PL EYK +G F +M+
Sbjct: 748 LREIERAVLLRVVDEKWMDHLDAMDQLRQGIGLRAYGQKDPLVEYKFEGYEMFQNMI 804
>gi|433609326|ref|YP_007041695.1| Protein translocase subunit [Saccharothrix espanaensis DSM 44229]
gi|407887179|emb|CCH34822.1| Protein translocase subunit [Saccharothrix espanaensis DSM 44229]
Length = 959
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 296/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G I+EM+T VVT NDYLA+RDAE
Sbjct: 79 RHFDVQLMGGAALHLGQISEMRTGEGKTLTSVLPSYLNALAGEGVHVVTTNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGLSVG+I M PE+RR+ Y DITY N+E GFDYLRDN+A + +++V R
Sbjct: 139 WMGRIHRFLGLSVGVILSEMTPEQRRAAYHSDITYGTNNEFGFDYLRDNMAWSQDEMVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A + Y A++A + + +HY V+ +
Sbjct: 199 G---HYFAVVDEVDSILIDEARTPLIISGPADQSSRWYVEFARLATRMKRDVHYEVDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ ++E+G+ E L +L+D N P + N++KAKE + +D YIVRNG+ +I+
Sbjct: 256 RTIGVSEQGVQYVEDQLGIENLYDSTNTPLVGYFQNSIKAKELFTKDKDYIVRNGEVMIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL GMTGTA+T
Sbjct: 316 DEFTGRVLAGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYAKLGGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P R D P + T K+E +++ G+PVLVG+
Sbjct: 376 EAAEFHQTYKLGVVPIPTNRPMQRQDQPDLVYKTEEAKFEAVAEDILERHEKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL Q+G+PH VLNA K+ REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVERSEYLSKLLVQKGVPHEVLNA--KHHDREALIIAKAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 494 LGGNPDIIADHELRERGL 511
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 170/348 (48%), Gaps = 75/348 (21%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL+DE+ ++ F+ +
Sbjct: 538 EAEEVRAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLKDELMRR--FNAA 595
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
++++R+ +D+PIE + R + Q E+ F IRK+++++DEV+ QRK +Y
Sbjct: 596 MVENVMTRLRVPDDVPIEHKMVTRAIRSAQTQVEQQNFEIRKNVLKYDEVMNEQRKVIYA 655
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R +L G E +Q+ + VV + + G + W LDKL
Sbjct: 656 ERHRVLAG--EDLREQVEHMITGVVGDYVDGATAD-GYAEDWDLDKLW------------ 700
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
T LK+ L I +++ K L +
Sbjct: 701 ---------TALKT------LYPITLDH-----------------------KALLESDDE 722
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-------YMKEVERAVLVKTL 819
DLTK L+ L + +A+Y E+R D+ M+E+ER VL+ L
Sbjct: 723 DLTKES--------LKAKLQEDALAAY-----EAREADIDGRVGPGAMRELERRVLLSVL 769
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
D WR+HL M+ L + +R+ R+PL EY+ +G F ML A R
Sbjct: 770 DRKWREHLYEMDYLKEGIGLRAMAQRDPLIEYQREGFDMFNGMLEALR 817
>gi|385681295|ref|ZP_10055223.1| preprotein translocase subunit SecA [Amycolatopsis sp. ATCC 39116]
Length = 936
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/464 (48%), Positives = 305/464 (65%), Gaps = 34/464 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G +AEMKT VVT NDYLA+RD+E
Sbjct: 81 RPYDVQLMGGAALHLGQVAEMKTGEGKTLTSVLPVYLNAISGKGVHVVTTNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG I M P ERR Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 141 WMGRVHRFLGLEVGAILSEMTPTERRKAYHADITYGTNNEFGFDYLRDNMAWSLDDCVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + HY V+ +
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGPAEQSARWYVEFARMAPLMKRDTHYEVDERK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE+G+A E L ++L++ N P ++ NALKAKE Y+RD YIVRNG+ LI+
Sbjct: 258 RTVGVTEKGVAFIEDQLGIDNLYESANTPLVGYLNNALKAKELYKRDKDYIVRNGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY +L+GMTGTA+T
Sbjct: 318 DEFTGRILAGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDRLAGMTGTAET 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P +R D P + T K+E +++ G+PVLVG+
Sbjct: 378 EAAEFHQTYKLGVVPIPTNRPMVRKDQPDLIYKTEEAKFEAVAEDIAERHAKGQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL + +PH VLNA KY REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 438 TSVEKSEYLSKLLVKLNVPHEVLNA--KYHDREALIIARAGRKGAVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
LGGNP ++A + + +R L + + + + PKVL E+K
Sbjct: 496 LGGNPDIIADERLRERGL-----DPVENSAEYEALWPKVLEEVK 534
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ + E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 529 VLEEVKAEVKAEAEEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 588
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + DMPIE + R + Q E+ IRK+++++DE
Sbjct: 589 ELMRRFNAVMVERVMTTMRLPD--DMPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDE 646
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDK 692
V+ QRK +Y R+ +L G + E + + A VD G + H + W+ K
Sbjct: 647 VMNQQRKVIYAERRRVLEGEDLSEQMQHMLVDVLTAYVDGATAEGYAEDWDHEKLWTALK 706
Query: 693 LL 694
L
Sbjct: 707 QL 708
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
+ R + M+++ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G
Sbjct: 750 DGRVGEGAMRQLERQVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLIEYQREGFDM 809
Query: 859 FISMLSATRRLTV 871
F +ML + + V
Sbjct: 810 FNAMLDSLKEEAV 822
>gi|375096990|ref|ZP_09743255.1| preprotein translocase, SecA subunit [Saccharomonospora marina
XMU15]
gi|374657723|gb|EHR52556.1| preprotein translocase, SecA subunit [Saccharomonospora marina
XMU15]
Length = 948
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/438 (48%), Positives = 297/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++GGA LH G +AEMKT VVT NDYLA+RD+E
Sbjct: 79 RPFDVQLMGGAALHLGQVAEMKTGEGKTLTSVLAVYLNAISGKGVHVVTTNDYLAKRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGL VG I + P RR Y+ D+TY N+E GFDYLRDN+A + + V R
Sbjct: 139 WMGRIHRFLGLEVGAILSELPPSARREAYQADVTYGTNNEFGFDYLRDNMAWSLDDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADQSSRWYTEFARMAPLMKKDVHYEVDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE+G+ E L ++L++ N P F+ NALKAKE Y RD +YIVRNG+ LI+
Sbjct: 256 RAVGVTEQGVEFVEDQLGIDNLYEAANTPLVGFLNNALKAKELYNRDKEYIVRNGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DEFTGRILAGRRFNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P +R D P + T + K+E ++ G+PVLVG+
Sbjct: 376 EAAEFHQTYKLGVVPIPTNRPMVRADQPDLIYKTEQSKFEAVADDIAEKNERGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+PH VLNA+ + REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVEKSEYLSKLLVKRGVPHEVLNAKQHH--REALIIAKAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A +++ +R L
Sbjct: 494 LGGNPDIIADEVLRERGL 511
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 96/165 (58%), Gaps = 9/165 (5%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ ++F+ V R
Sbjct: 546 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDDLMRRFNAAMVERVMTTMR 605
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + D+PIE + R + Q E+ IRK+++++DEVL +QRK +Y R+ +L G
Sbjct: 606 LPD--DVPIEHKIVSRAIKSAQTQVEQQNMEIRKNVLKYDEVLNLQRKVIYGERRRVLEG 663
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNV-----DPLKHPRYWSLDKLL 694
E Q+ ++ VV + G + H + W+ K L
Sbjct: 664 --EDLRDQVEHMLRDVVSAYVDGATSEGYAEDWDHEKLWTALKTL 706
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 781 LRKYLGDILIASYLNVVQE--SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVN 838
LR+ L + +Y N E ++ + M+E+ER V++ LD WR+HL M+ L +
Sbjct: 729 LREILLEDAAKAYANREAEIDAKVGEGAMRELERRVVLSVLDRKWREHLYEMDYLKEGIG 788
Query: 839 VRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+R+ R+PL EY+ +G F +ML + + V
Sbjct: 789 LRAMAQRDPLVEYQREGFDMFNAMLESLKEEAV 821
>gi|452958638|gb|EME63991.1| preprotein translocase subunit SecA [Amycolatopsis decaplanina DSM
44594]
Length = 942
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/471 (46%), Positives = 311/471 (66%), Gaps = 34/471 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G ++EMKT V+TVNDYLA+RDAE
Sbjct: 78 RPYDVQLMGGAALHLGQVSEMKTGEGKTLTQVLPAYLNAVSGKGVHVITVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGL VG+I PE RR Y DIT+ N+E GFDYLRDN+A + E V R
Sbjct: 138 WMGRIHRFLGLEVGVILADQTPEVRRQQYAADITHGTNNEFGFDYLRDNMAWSLEDCVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++ L+ +HY V+++
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADQSSRWYIEFARMTPLMKPDIHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE+G+A E L ++L++ N P ++ NALK KE Y+RD YIVR+G+ LI+
Sbjct: 255 RTVGVTEKGVAFVEDQLGIDNLYEAANTPLVGYLNNALKVKELYKRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRILHGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P +R D + T + K+E +++ G+PVLVG+
Sbjct: 375 EAAEFHQTYKLGVVPIPTNKPMVRADQADLIYKTEQAKFEAVAEDIAERHEKGQPVLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS LL + G+PH VLNA K+ REA VA+AGRK A+T++TNMAGRGTDI+
Sbjct: 435 TSVEKSEHLSKLLLKLGVPHEVLNA--KHHDREALIVARAGRKGAVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLA 448
LGGNP ++A +++ DR L + + + + + PKVL E++ + + A
Sbjct: 493 LGGNPDIIADEVLRDRGL-----DPVEHSEEYEAAWPKVLEEVQADTKAEA 538
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ + E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 VLEEVQADTKAEAEEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + + + Q E+ IRK+++++DE
Sbjct: 586 ELMRRFNATMVERVMTTMRLPD--DVPIEHKMVSKAIKSAQTQVEQQNMEIRKNVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQA-VVDEIIFGNVDPLKHPRYWSLDK 692
V+ QRK +Y R +L G + E + + A V +E G + H + W+ K
Sbjct: 644 VMNEQRKVIYAERLRVLEGEDLREQIEHMLVDVINAYVTEETSSGYSEDWDHEKLWTALK 703
Query: 693 LL 694
L
Sbjct: 704 TL 705
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ LD WR+HL M+ L + +R+ R+P+ EY+ +G F +ML +
Sbjct: 754 MRSLERQVMLTVLDRKWREHLYEMDYLKEGIGMRALAQRDPVIEYQREGYDMFRAMLESL 813
Query: 867 RRLTV 871
+ V
Sbjct: 814 KEEAV 818
>gi|220932480|ref|YP_002509388.1| preprotein translocase subunit SecA [Halothermothrix orenii H 168]
gi|254767918|sp|B8CYM4.1|SECA_HALOH RecName: Full=Protein translocase subunit SecA
gi|219993790|gb|ACL70393.1| preprotein translocase, SecA subunit [Halothermothrix orenii H 168]
Length = 845
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/430 (49%), Positives = 289/430 (67%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
RH+DVQ++GG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 82 FRHYDVQLMGGIVLHQGKIAEMKTGEGKTLAATLPVYLNALTGKGVHVVTVNDYLAKRDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGLSVG+I GM P ER+ Y+ D+TY +N+E GFDYLRDNLA N + +V
Sbjct: 142 EWMGQIYRFLGLSVGVILNGMTPRERKKAYQADVTYGSNNEFGFDYLRDNLAYNPDDVVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
H+AI+DEVDS+LIDE R PL+ISG A + Y ++ LV+G Y V+ K
Sbjct: 202 ---GELHYAILDEVDSILIDEARTPLIISGPAQETTKDYRKFNRIIPRLVKGRDYEVDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N +V LTEEG+A E L ++L+D +N A + ALKA ++D YIV++G+ I
Sbjct: 259 NRTVHLTEEGLARVEKKLNISNLYDDQNFQLAHQLNQALKAHTLMKKDRDYIVKDGEVKI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKEG+ + +S A ITYQ+ F++Y KL+GMTGTA
Sbjct: 319 VDEFTGRIMEGRRFSEGLHQAIEAKEGVAVNKESQTFASITYQNFFRMYDKLAGMTGTAA 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ M V+++PTN P IR DLP F T K++ +EV ++ G+PVLVG
Sbjct: 379 TEEEEFIKIYGMEVVQIPTNKPMIREDLPDVVFRTEEAKFKAVAEEVALKYKKGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +E SE LS +LK++GIPH VLNA K +EAE + +AG+K ++TISTNMAGRGTDI
Sbjct: 439 TVDIEKSEKLSRMLKRKGIPHQVLNA--KNHEKEAEIIKKAGQKNSVTISTNMAGRGTDI 496
Query: 397 ILGGNPKMLA 406
+LG K L
Sbjct: 497 VLGEGVKELG 506
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 166/349 (47%), Gaps = 69/349 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS++F VSL+D++ + F D
Sbjct: 499 GEGVKELGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSQFFVSLEDDLLRLFGSDNIS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ D+D PIE I R L Q E F IRK+++E+D ++ QR+ +Y+
Sbjct: 559 M--LMDRMGFDDDQPIEHKMITRSLERAQKKVEGRNFEIRKTILEYDNIMNKQREIIYEQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL ++ + I ++ +VD+I+ + HP W +D L+K
Sbjct: 617 RKKILFASD--LKEYIMGMIEMLVDDIMDTYLSSEVHPDDWDIDGLIK------------ 662
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
L E N ++IN F D +
Sbjct: 663 ---------------YLSEFNLVNINEEDFKDKDREK----------------------- 684
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+R+ L I IA+ +E+ M+++ + + ++ +D W +HL
Sbjct: 685 -------------IREEL--IKIATKTYEEKEAEIGKESMQKLIKNLALRIIDRNWMNHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
NM+ L + +R++G R+PL EYK + F M R +++L +
Sbjct: 730 DNMDELRQGIGLRAYGQRDPLTEYKFESYDMFNGMTGTIREEIIKNLFR 778
>gi|392944611|ref|ZP_10310253.1| preprotein translocase, SecA subunit [Frankia sp. QA3]
gi|392287905|gb|EIV93929.1| preprotein translocase, SecA subunit [Frankia sp. QA3]
Length = 983
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/438 (50%), Positives = 294/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT VVTVNDYLAQRDAE
Sbjct: 80 RHFDVQIMGGAALHLGNIAEMKTGEGKTLVSTLPAYLNALSGKGVHVVTVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I M P RR+ Y CDITY N+E GFDYLRDN+A ++++LV R
Sbjct: 140 NMGRVHRFLGLTVGVIHPQMPPPVRRAQYACDITYGTNNEFGFDYLRDNMAWSADELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + + Y VE
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPADHPTRWYTEFARIAPLLERDVDYEVEEGK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L ++L++ N P ++ N+LKAKE Y+RD YIV +G+ LI+
Sbjct: 257 RTVAITESGVEKVEDQLGIDNLYESVNTPLVGYLNNSLKAKELYKRDKDYIVTDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEFTGRVLHGRRYSEGMHQAIEAKEKVEIKQENQTLATITLQNYFRLYDKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ + V+ +PTN P IR D P + T K++ +++ G+PVLVG+
Sbjct: 377 EAAEFHQIYSLGVVPIPTNKPMIRNDQPDVVYKTEIAKFDAVVEDIAERHEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+PH VLNA K+ REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKELTKRGVPHEVLNA--KHHEREATIIAEAGRKGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 495 LGGNPEFIAQAELRQRGL 512
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 13/213 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ E EV GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 528 ALEKARQSVKTEHEEVVEAGGLYVLGTERHESRRIDNQLRGRAGRQGDRGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F+ + AV+ ++ R+ ED+PIE + R + Q E F IRK+++++D
Sbjct: 588 DLMRLFN---AAAVEGIMDRLNIPEDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EV+ QR +YD R+ +L GA+ +Q+ ++ V+ + G +P W LD L
Sbjct: 645 EVMNKQRTVIYDERRKVLDGAD--LHEQVRHFVDDTVEGYVRGATSD-GYPEEWDLDTLW 701
Query: 695 KEF-----IAIAGKILDDLFAGISGDTLLKSIE 722
+ + DD G++ D LL+ I+
Sbjct: 702 TALGQLYPVGVEAPGTDDR-DGLTPDHLLEDIQ 733
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
E D+ M+E+ER V++ LD WR+HL M+ L + +R+ G R+PL EY+ +G
Sbjct: 749 EGADDEPIMRELERRVVLAVLDRKWREHLYEMDYLQEGIGLRAMGQRDPLVEYQREGFDM 808
Query: 859 FISMLSATRRLTVESL 874
F +M+ + +V L
Sbjct: 809 FQTMMEGIKEESVRLL 824
>gi|374851981|dbj|BAL54925.1| preprotein translocase subunit SecA, partial [uncultured
Acidobacteria bacterium]
Length = 890
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/453 (48%), Positives = 295/453 (65%), Gaps = 45/453 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 57 MRHFDVQLIGGIVLHQGKIAEMKTGEGKTLVATLPLYLNALTGKGCHLVTVNDYLAKRDT 116
Query: 38 EWMERVHRFLGLSVGLIQRG------------------MIPEERRSNYRCDITYTNNSEL 79
WM ++ LGL+VG+IQ + P R+ Y DITY N+E
Sbjct: 117 VWMGPIYHLLGLTVGVIQHEASFLYDPTYKNPDPRLARLRPCTRKEAYLADITYGTNNEF 176
Query: 80 GFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA 139
GFDYLRDN+ + + V R ++AIVDEVDS+LIDE R PL+ISG + + V +Y A
Sbjct: 177 GFDYLRDNMKYDLSECVQRG---HYYAIVDEVDSILIDEARTPLIISGPSEETVQKYYDA 233
Query: 140 AKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAK 198
VA LV+G+ Y V+ K +V LTE GI AE +L+ EN + AL A
Sbjct: 234 DAVARRLVKGVDYEVDEKARTVALTESGIEKAERLFGCGNLYAPENMDLLHCLTQALVAH 293
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y+RD YIV++G+ +I++E TGR RRWS+G+HQA+EAKEG++IQA++ +A IT+
Sbjct: 294 NLYKRDYHYIVKDGEVIIVDEFTGRQMPGRRWSDGLHQAIEAKEGVRIQAENQTLATITF 353
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KL+GMTGTA+TE +EF+K++ + V+ +PT+ P IRVD P F TA KW
Sbjct: 354 QNYFRMYEKLAGMTGTAETEAEEFMKIYNLDVVVIPTHKPMIRVDHPDLVFRTAEEKWNA 413
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+E++ ++ G+PVLVG+ S+ENSE LS LK+ GIPHNVLNA+P+ A REAE VAQAG
Sbjct: 414 VIEEIKECYQRGQPVLVGTVSIENSEMLSRRLKKLGIPHNVLNAKPENAEREAEIVAQAG 473
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKKIIE 411
RK A+TI+TNMAGRGTDI+LGGNP+ LAK+ ++
Sbjct: 474 RKGAVTIATNMAGRGTDILLGGNPEFLAKEFLK 506
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 85/127 (66%), Gaps = 3/127 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV RLGGLH+IGT HE+RRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F+
Sbjct: 534 EHEEVVRLGGLHIIGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRIFAGPRV 593
Query: 587 WAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
A+ D + E PIE + R + Q + E + F IRK L+E+D+V+ QR+ +Y
Sbjct: 594 KAIMDRLGGWPYGE--PIESKMVTRAIERAQKAVEAHNFAIRKHLLEYDDVMNKQRETIY 651
Query: 646 DLRQSIL 652
LR+ +L
Sbjct: 652 GLRRQLL 658
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ ER +++ +D W+DHL+ ++ L + +R + R+PL EYK + F +ML
Sbjct: 748 MRYYERIIMLNIVDAQWKDHLLVLDHLKEGIGLRGYAQRDPLVEYKKEAFALFEAMLDRI 807
Query: 867 RRLTVESL 874
R T+ L
Sbjct: 808 DRETIRFL 815
>gi|392411374|ref|YP_006447981.1| protein translocase subunit secA [Desulfomonile tiedjei DSM 6799]
gi|390624510|gb|AFM25717.1| protein translocase subunit secA [Desulfomonile tiedjei DSM 6799]
Length = 880
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/430 (50%), Positives = 288/430 (66%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGIVLHQGKIAEMKTGEGKTLAATLPVYLNALTGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I + EERR +Y D+TY N+E GFDYLRDN+ + V
Sbjct: 141 EWMSAIYHFLGLSVGVIVHDLSDEERRISYNSDVTYGTNNEFGFDYLRDNMKFALQDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+L+DE R PL+ISG ++ RY +V L + HYT++ K
Sbjct: 201 R---DLHYAIVDEVDSILVDEARTPLIISGPTHENTDRYYRINRVIPGLHKESHYTIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTEEG+A E AL +L+D N V ALKA +++DV YIV++G+ +I
Sbjct: 258 ARSVVLTEEGVAKVEKALNVTNLYDPGNMETLHHVNQALKAHTLFKKDVDYIVKDGQVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE ++I+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEDVRIENENQTLATITFQNYFRMYDKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ +PTNLP IR D P + T + K++ +E+ +++ G+PVLVG
Sbjct: 378 TEAAEFKKIYNLDVVVIPTNLPMIRQDNPDLIYKTEQEKFDAVIEEIRDLYQRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SEYL+ LK+ GIPHNVLNA K A EAE VAQAGR +TISTNMAGRGTDI
Sbjct: 438 TISIEKSEYLARRLKKLGIPHNVLNA--KNHALEAEIVAQAGRYKGVTISTNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
ILGGNP+ LA
Sbjct: 496 ILGGNPRFLA 505
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 186/393 (47%), Gaps = 76/393 (19%)
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
P + + +L + + C +E V GGLH++GT HESRRIDNQLRGR+GRQGDPGS
Sbjct: 512 PQDSEEFSKLLGEFKNQCEDEKRNVIAEGGLHILGTERHESRRIDNQLRGRSGRQGDPGS 571
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
+RF +SL+D++ + F D + + R+ +E PIE + + Q E + F I
Sbjct: 572 SRFYLSLEDDLMRIFGGDRVKMI--MERVGMEEGEPIEHRYTTKAIENAQKKVEAHNFDI 629
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK L++FD+V+ QR+ VY R+ IL G + + I +Q + ++++ DP H
Sbjct: 630 RKHLLDFDDVMNKQREVVYSQRRFILGG--QDLKETIQDMIQDIAEDLVDRFCDPKTHYE 687
Query: 687 YWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
W + LKE A+ G+ GI F F +LP +
Sbjct: 688 EWDI-AALKE--ALWGQF------GI---------------------RFDFEELPSTQDT 717
Query: 747 FRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVY 806
GIR D+ G + + +I
Sbjct: 718 IAGIR---------------DVVVEGALKGYVRKTEEITPEI------------------ 744
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++E+ ++++ +D W+DHL++M+ L + +R +G R+PL+EY+ +G F+ M
Sbjct: 745 MQQLEKFIMLQAVDNQWKDHLLSMDHLKDGIGLRGYGQRDPLKEYQREGYELFLDMSQRI 804
Query: 867 RRLTVES--LVQYWSS-------PMESQELFLS 890
+ T+ + LV+ SS P + QE+ LS
Sbjct: 805 KEETIRNLFLVRIASSDEVEELAPQKEQEIVLS 837
>gi|429221177|ref|YP_007182821.1| Preprotein translocase subunit SecA [Deinococcus peraridilitoris
DSM 19664]
gi|429132040|gb|AFZ69055.1| preprotein translocase, SecA subunit [Deinococcus peraridilitoris
DSM 19664]
Length = 868
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/446 (50%), Positives = 291/446 (65%), Gaps = 40/446 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+D Q+IGGA LH G IAEMKT +VTVNDYL + AE
Sbjct: 80 RHYDTQLIGGAALHGGRIAEMKTGEGKTLVATLALALNALEGRGAHLVTVNDYLVRVGAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M V+R LGL+VG+IQ + P ER++ Y CDITY NSELGFDYLRDN+A + EQLV+R
Sbjct: 140 EMGLVYRTLGLTVGVIQHNLQPHERKAAYSCDITYVTNSELGFDYLRDNMAQSPEQLVLR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P ++AIVDEVDS+LIDE R PL+ISG A K +Y V AK+ + L +G
Sbjct: 200 ADYPLNYAIVDEVDSILIDEARTPLIISGAAEKATDQYFVMAKLVKRLAKGEPAEPGVRP 259
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YT++ K+ +V LTE GI E L +DL+ EN A ++ AL+AKE Y RD
Sbjct: 260 EPTGDYTLDEKSKNVHLTENGITRIEKLLSVDDLYSPENMEKAHMIVQALRAKEMYHRDT 319
Query: 206 QYIV-RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +II+E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 320 DYIVTEQGEVVIIDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRL 379
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K SGMTGTAKTEEKEFL ++ V+ +PTNLP IR D + T GK+ A +E+
Sbjct: 380 YSKFSGMTGTAKTEEKEFLDIYGADVLVIPTNLPVIRKDAEDIIYRTKNGKFAAAVKEIV 439
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
+ GRP+LVG+ S+++SE LS LL GI HNVLNA KY A EA VAQAGR A+T
Sbjct: 440 ELHATGRPILVGTASIDSSEQLSRLLTAAGIKHNVLNA--KYEALEASIVAQAGRSGAVT 497
Query: 385 ISTNMAGRGTDIILGGNPK-MLAKKI 409
I+TNMAGRGTDI+LGGN + ML +++
Sbjct: 498 IATNMAGRGTDIMLGGNAEYMLGERL 523
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 153/340 (45%), Gaps = 77/340 (22%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF VS +DE+ + F+ V
Sbjct: 580 KVREAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSFEDELMRLFA--NERVV 637
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++ R+ D+ PIE + + Q E F RK L+EFD V+ QR+ VY R+
Sbjct: 638 AMMDRLGMDDAQPIEARMVTGAIERAQARVEDRNFSTRKQLLEFDNVMSKQREVVYAQRR 697
Query: 650 SILTGAN----ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKIL 705
+L G + ES I +++ +D F D ++P W LD + G +
Sbjct: 698 EVLLGPDADVEESVEGMIGDFVELQLD--TFAPAD--QNPDDWDLD-------GLRGALS 746
Query: 706 DDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKS--SSLKRWLAI 763
D +P S D F G+R S + R L
Sbjct: 747 D----------------AIPAFESFD---------------FEGLRAMSVADAHARVLEA 775
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
++ L + LG L+ V R VL++ +D +W
Sbjct: 776 SAEALEQR----------ENELGKALLTG-----------------VSRYVLLQVVDQYW 808
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
++HL M+ L + +R +G R+P EYK + + F M+
Sbjct: 809 KEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATKMFNEMI 848
>gi|206900880|ref|YP_002251124.1| preprotein translocase, SecA subunit [Dictyoglomus thermophilum
H-6-12]
gi|206739983|gb|ACI19041.1| preprotein translocase, SecA subunit [Dictyoglomus thermophilum
H-6-12]
Length = 787
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/423 (50%), Positives = 290/423 (68%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEM+T +VTVNDYLA+RD
Sbjct: 78 MRHFDVQLMGGIVLHQGKIAEMQTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM ++ FLGL VGL+Q ERR Y DITY N+E GFDYLRDN+A + +QLV
Sbjct: 138 YWMGPIYEFLGLEVGLLQNDTPTLERRKAYMADITYGTNNEFGFDYLRDNIALSPDQLVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A + Y +A + A L + + YT + K
Sbjct: 198 R---ELNYAIVDEVDSILIDEARTPLIISGPAKGESHIYKLAIRAARYLKKDIDYTTDEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG+ AE L DL+D +N A ++ LKA FY RD YIV++G+ +I
Sbjct: 255 TRTVSLTEEGLRKAEKFLGVKDLYDFKNMDLAHALLQCLKALNFYHRDRDYIVKDGEVII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG++I+ ++V +A I+ Q+ F++Y KL+GMTGTA
Sbjct: 315 VDEFTGRLMFGRRYSDGLHQAIEAKEGVRIREENVTLATISIQNYFRMYKKLAGMTGTAA 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ + V+ +P N P R++ P F T K+E +E+E M+++GRPVLVG
Sbjct: 375 TEEEEFVKIYGLEVVVIPPNKPLRRINYPDVIFRTEEEKFEAVVKEIEEMYKIGRPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK++GIPHNVLNA KY +EAE +A+AG+KYA+TI+TNMAGRGTDI
Sbjct: 435 TTSIEKSERLSKMLKKKGIPHNVLNA--KYHEKEAEIIAKAGQKYAVTIATNMAGRGTDI 492
Query: 397 ILG 399
+LG
Sbjct: 493 VLG 495
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 93/153 (60%), Gaps = 8/153 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F D
Sbjct: 495 GEGVAELGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLLRLFGGDQIK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A L+ R+ + PIE + R + Q E+ F IRK L+E+D+VL QR VY
Sbjct: 555 A--LMERLGMERGQPIESPLLTRIIENSQAKVERMNFEIRKQLLEYDDVLNTQRDIVYKE 612
Query: 648 RQSILTGAN-ESCSQQIFQYMQAVVDEIIFGNV 679
R+ IL N E Q+I M V+D F NV
Sbjct: 613 RRKILLMENLEDIVQRI---MNRVLDR--FFNV 640
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE++R VL+ +D W +HL +M+ L + +R+ H +PL EYK + + F M+ +
Sbjct: 702 KEIQRIVLLYVIDKLWIEHLNDMDALRDGIGLRAIAHHDPLVEYKKEAYQMFQDMVESFE 761
Query: 868 RLTVESLVQYWSSPMESQ 885
++ L S ES+
Sbjct: 762 WESIRYLFNIHISTQESK 779
>gi|319790056|ref|YP_004151689.1| preprotein translocase, SecA subunit [Thermovibrio ammonificans
HB-1]
gi|317114558|gb|ADU97048.1| preprotein translocase, SecA subunit [Thermovibrio ammonificans
HB-1]
Length = 869
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 294/443 (66%), Gaps = 35/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 88 MRHYDVQLIGGIVLHQGKIAEMKTGEGKTLVATLPSYLNALAGRGVHVVTVNDYLAKRDA 147
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+ +LGL+VG +Q M P +R+ Y DITY NSE GFDYLRDN+ + E+ V
Sbjct: 148 EWMGPVYNYLGLTVGYLQNQMEPPQRKEMYARDITYGTNSEFGFDYLRDNMVFSKEEKVQ 207
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +AIVDE DS+LIDE R PL+ISG + + V Y +A + L + + +E K
Sbjct: 208 R---ELFYAIVDEADSILIDEARTPLIISGPSEESVDVYYIADAIVRQLKKEKDFKLEEK 264
Query: 158 NNSVELTEEGIALAE------MALETNDLWDEN-DPWARFVMNALKAKEFYRRDVQYIVR 210
+ LT+EGI E ++ +L+D ++ +L+A ++RDV Y+V+
Sbjct: 265 TKTATLTDEGIRHVEEIVKKMTGMKEFNLYDPKFSDLLHAIIQSLRAHHLFKRDVDYVVK 324
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +I++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A IT Q+ F+LY KL+G
Sbjct: 325 DGKVIIVDEFTGRIMPGRRWSDGLHQAVEAKEGVKIEAENQTLATITLQNYFRLYKKLAG 384
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA+TE E +++ + V+ +PTN P IR D P F T R K+ +E+E +++G
Sbjct: 385 MTGTAETEAAELKEIYGLDVVVIPTNKPVIRKDHPDLIFKTKRAKFNAVIKEIEKNYKIG 444
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
RPVLVG+ S+E+SEYLS LLKQ+GIPH VLNA KY +EAE VAQAGR A+TI+TNMA
Sbjct: 445 RPVLVGTNSIEDSEYLSRLLKQRGIPHQVLNA--KYHEKEAEIVAQAGRLGAVTIATNMA 502
Query: 391 GRGTDIILGGNPKMLAKKIIEDR 413
GRGTDI+LGGNP+ LAKK +++R
Sbjct: 503 GRGTDILLGGNPEFLAKKELKER 525
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 156/352 (44%), Gaps = 60/352 (17%)
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLIS 593
LGGL++IGT +ESRRIDNQLRGRAGRQGDPG +RF +SL+D + + F D L+
Sbjct: 562 LGGLYIIGTERNESRRIDNQLRGRAGRQGDPGESRFFLSLEDNLLRLFGSDR--IKKLME 619
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
+ ED PI + + L Q E+ F IRK L+E+DEV VQRK +Y+ R IL
Sbjct: 620 MMNVPEDEPITHKMVSKALENAQRRVEEQNFQIRKRLLEYDEVYNVQRKVIYEQRNKILE 679
Query: 654 GANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGIS 713
G E+ ++I +M+ V E++ P W L+ L K L+ F
Sbjct: 680 G--ENFKEEILGFMEDVAWELVDSFAPENVLPDEWDLEGL--------KKTLETRFG--- 726
Query: 714 GDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFR-GIRRKSSSLKRWLAICSDDLTKNG 772
F FP K L + + ++ + D L +
Sbjct: 727 ---------------------FEFPIPTKYEELMNLEVEGAPTDREKLAKLIYDTLAEK- 764
Query: 773 RYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNR 832
N L K +G+ + VV R D +WR+HL ++
Sbjct: 765 -----YNELEKLVGEGQLREIERVVMLDRLDQ-----------------YWREHLRALDH 802
Query: 833 LSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMES 884
+ ++ R +G R+P+ E+K + + F ++S V+SL Y+ E
Sbjct: 803 IKESIGWRGYGQRDPVVEFKKEAFQLFEDLISNIENGVVDSLFNYYRYAKEQ 854
>gi|352685085|ref|YP_004897070.1| preprotein translocase subunit secA [Acidaminococcus intestini
RyC-MR95]
gi|350279740|gb|AEQ22930.1| preprotein translocase subunit secA [Acidaminococcus intestini
RyC-MR95]
Length = 839
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/424 (51%), Positives = 291/424 (68%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEM+T VVTVNDYLA+RD+
Sbjct: 76 LRHFDVQLMGGCILHRGKIAEMRTGEGKTLVATLPAYLNALEGKGVHVVTVNDYLARRDS 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+RFLGLSVGLI M R++ Y DITY N+E GFDYLRDN+ + +Q+V
Sbjct: 136 EDMGRVYRFLGLSVGLITHEMDYPARKAAYAADITYGTNNEFGFDYLRDNMVISLDQMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG ++ + Y V A VA L +G YTV+ K
Sbjct: 196 R---PLHYAIVDEVDSILIDEARTPLIISGPGAQSTSLYQVMADVAAKLKEGEDYTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-END-PWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V TE GIA E L ++++D EN ++ +M ALKAK RD Y+V++G+ +
Sbjct: 253 QKTVAPTETGIAKTEKLLGVSNMYDGENGVDYSHQLMAALKAKALMHRDRDYVVKDGEVI 312
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+SEG+HQA+EAKE +K++ +S +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 313 IVDEFTGRLMFGRRYSEGLHQAIEAKEHVKVERESQTLATITFQNYFRMYDKLSGMTGTA 372
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KTEE+EF K++ + V+ VPTN PNIR+D P + T R K+ +E + + GRPVLV
Sbjct: 373 KTEEQEFQKIYGLDVVVVPTNKPNIRIDYPDVIYKTRRAKYRAVANAIEELHKKGRPVLV 432
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS++ SE LS+LLK++GI HNVLNA K+ +EAE VA AG+ A+TI+TNMAGRGTD
Sbjct: 433 GTTSIQQSEELSELLKKRGIEHNVLNA--KFHEKEAEIVADAGQMGAVTIATNMAGRGTD 490
Query: 396 IILG 399
I+LG
Sbjct: 491 IVLG 494
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR RQGDPGSTRF +SL+D++ + F D
Sbjct: 494 GDGVAELGGLHIIGTERHESRRIDNQLRGRCARQGDPGSTRFYLSLEDDLMRLFGSDNIS 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE + R + Q E F IRK ++E+D+V+ QR+ +YD
Sbjct: 554 GI--MDKLGMEEDEPIEHKIVTRSIESAQKKVEARNFEIRKQVLEYDDVMNQQREVIYDQ 611
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKI 704
R+ IL A+ + + +VD + + W + L+ +EF A AG +
Sbjct: 612 RRQILEKAD--LKETVLDMASHIVDRSMDMYAPKEAYSEDWDVKSLISYAEEFYAPAGFL 669
Query: 705 LDDLFAGISGDTL 717
++ +S D L
Sbjct: 670 KEEKLQEMSRDEL 682
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 793 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
Y N +E+ + M+E+E V++K +D W +HL M+ L + +R++G R+PL EYK
Sbjct: 693 YYNAREENNTAPI-MRELENLVMLKVVDSHWMEHLDAMDALREGIGLRAYGQRDPLVEYK 751
Query: 853 IDGCRFFISMLSATRRLTVESLVQYW 878
+ F +M A V+ +V+Y
Sbjct: 752 FEAYEMFEAMKEA----IVDDVVRYM 773
>gi|111220763|ref|YP_711557.1| preprotein translocase subunit SecA [Frankia alni ACN14a]
gi|123143483|sp|Q0RR55.1|SECA_FRAAA RecName: Full=Protein translocase subunit SecA
gi|111148295|emb|CAJ59967.1| preprotein translocase, ATPase secretion component (General
Secretory Pathway) [Frankia alni ACN14a]
Length = 987
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/438 (50%), Positives = 293/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT +VTVNDYLAQRDAE
Sbjct: 80 RHFDVQIMGGAALHLGNIAEMKTGEGKTLVSTLPAYLNALAGKGVHIVTVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I M P RR+ Y CDITY N+E GFDYLRDN+A ++++LV R
Sbjct: 140 NMGRVHRFLGLTVGVIHPQMPPPVRRAQYACDITYGTNNEFGFDYLRDNMAWSADELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + + Y VE
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPADNPTRWYTEFARIAPLLERDVDYEVEEGK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P ++ N+LKAKE Y+RD YIV +G+ LI+
Sbjct: 257 RTVAITESGVEKVEDQLGIENLYESVNTPLVGYLNNSLKAKELYKRDKDYIVTDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEFTGRVLHGRRYSEGMHQAIEAKEKVEIKQENQTLATITLQNYFRLYDKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ + V+ +PTN P IR D P + T K++ +++ G+PVLVG+
Sbjct: 377 EAAEFHQIYALGVVPIPTNKPMIRNDQPDVVYKTEIAKFDAVVEDIAERHEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+PH VLNA K+ REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKQLTKRGVPHEVLNA--KHHEREATIIAEAGRKGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 495 LGGNPEFIAQAELRQRGL 512
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 11/212 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ E +V GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 528 ALEKARQSVKTEHEDVVEAGGLYVLGTERHESRRIDNQLRGRAGRQGDHGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F+ + AV+ ++ R+ ED+PIE + R + Q E F IRK+++++D
Sbjct: 588 DLMRLFN---AAAVEGIMDRLNIPEDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL- 693
EV+ QR +Y+ R+ +L GA+ +Q+ ++ V+ + G +P W LD L
Sbjct: 645 EVMNKQRTVIYEERRKVLDGAD--LHEQVRHFVDDTVEGYVRGATAD-GYPEEWDLDTLW 701
Query: 694 --LKEFIAIAGKILD-DLFAGISGDTLLKSIE 722
L + + + D D G++ D LL+ ++
Sbjct: 702 TALGQLYPVGVEAPDTDDRDGLTTDHLLEDVQ 733
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ G R+PL EY+ +G F +M+
Sbjct: 757 MRELERRVVLAVLDRKWREHLYEMDYLQEGIGLRAMGQRDPLVEYQREGFDMFQTMMEGI 816
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 817 KEESVRLL 824
>gi|227824556|ref|ZP_03989388.1| preprotein translocase subunit secA [Acidaminococcus sp. D21]
gi|226905055|gb|EEH90973.1| preprotein translocase subunit secA [Acidaminococcus sp. D21]
Length = 844
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/424 (51%), Positives = 291/424 (68%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG +LH G IAEM+T VVTVNDYLA+RD+
Sbjct: 81 LRHFDVQLMGGCILHRGKIAEMRTGEGKTLVATLPAYLNALEGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+RFLGLSVGLI M R++ Y DITY N+E GFDYLRDN+ + +Q+V
Sbjct: 141 EDMGRVYRFLGLSVGLITHEMDYPARKAAYAADITYGTNNEFGFDYLRDNMVISLDQMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG ++ + Y V A VA L +G YTV+ K
Sbjct: 201 R---PLHYAIVDEVDSILIDEARTPLIISGPGAQSTSLYQVMADVAAKLKEGEDYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-END-PWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V TE GIA E L ++++D EN ++ +M ALKAK RD Y+V++G+ +
Sbjct: 258 QKTVAPTETGIAKTEKLLGVSNMYDGENGVDYSHQLMAALKAKALMHRDRDYVVKDGEVI 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+SEG+HQA+EAKE +K++ +S +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 IVDEFTGRLMFGRRYSEGLHQAIEAKEHVKVERESQTLATITFQNYFRMYDKLSGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KTEE+EF K++ + V+ VPTN PNIR+D P + T R K+ +E + + GRPVLV
Sbjct: 378 KTEEQEFQKIYGLDVVVVPTNKPNIRIDYPDVIYKTRRAKYRAVANAIEELHKKGRPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS++ SE LS+LLK++GI HNVLNA K+ +EAE VA AG+ A+TI+TNMAGRGTD
Sbjct: 438 GTTSIQQSEELSELLKKRGIEHNVLNA--KFHEKEAEIVADAGQMGAVTIATNMAGRGTD 495
Query: 396 IILG 399
I+LG
Sbjct: 496 IVLG 499
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR RQGDPGSTRF +SL+D++ + F D
Sbjct: 499 GDGVAELGGLHIIGTERHESRRIDNQLRGRCARQGDPGSTRFYLSLEDDLMRLFGSDNIS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE + R + Q E F IRK ++E+D+V+ QR+ +YD
Sbjct: 559 GI--MDKLGMEEDEPIEHKIVTRSIESAQKKVEARNFEIRKQVLEYDDVMNQQREVIYDQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKI 704
R+ IL A+ + + +VD + + W + L+ +EF A AG +
Sbjct: 617 RRQILEKAD--LKETVLDMASHIVDRSMDMYAPKEAYSEDWDVKSLISYAEEFYAPAGFL 674
Query: 705 LDDLFAGISGDTL 717
++ +S D L
Sbjct: 675 KEEKLQEMSRDEL 687
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 793 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYK 852
Y N +E+ + M+E+E V++K +D W +HL M+ L + +R++G R+PL EYK
Sbjct: 698 YYNAREENNTAPI-MRELENLVMLKVVDSHWMEHLDAMDALREGIGLRAYGQRDPLVEYK 756
Query: 853 IDGCRFFISMLSATRRLTVESLVQYW 878
+ F +M A V+ +V+Y
Sbjct: 757 FEAYEMFEAMKEA----IVDDVVRYM 778
>gi|51891263|ref|YP_073954.1| preprotein translocase subunit SecA [Symbiobacterium thermophilum
IAM 14863]
gi|81692252|sp|Q67T83.1|SECA_SYMTH RecName: Full=Protein translocase subunit SecA
gi|51854952|dbj|BAD39110.1| preprotein translocase subunit SecA [Symbiobacterium thermophilum
IAM 14863]
Length = 903
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/431 (50%), Positives = 290/431 (67%), Gaps = 29/431 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ+IGG VLH+G+IAEMKT +VTVNDYLA+ +
Sbjct: 82 RPFDVQLIGGIVLHEGNIAEMKTGEGKTLVAAMPLYLNALLGRGCHLVTVNDYLAKVGRD 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ R++RFLG+S GLI G+ +RR Y CDITY N+E GFDYLRDN+A + + +V R
Sbjct: 142 DIGRIYRFLGMSCGLIVHGLTSAQRREAYNCDITYGTNNEFGFDYLRDNMAMHPQDMVHR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
F +AIVDE DS+LIDE R PL+ISG + K Y AK+AE L + Y VE K
Sbjct: 202 ---EFFYAIVDEADSILIDEARTPLIISGPSGKPAEMYYTFAKIAERLKRDEDYIVEEKE 258
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V TEEGIA E L + L++ EN ++ NA+KAKE + RD Y+V++G+ +I+
Sbjct: 259 KRVAPTEEGIAKVEKWLNVDHLYEGENQQLVHYLNNAIKAKELFHRDRDYVVKDGQVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQAVEAKEG+KI+ ++ +A IT+Q+ F++Y KL+GMTGTA T
Sbjct: 319 DEFTGRLMFGRRWSDGLHQAVEAKEGVKIEEETQTLATITFQNYFRMYKKLAGMTGTALT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + VI +PTN P IR+D P + T + K++ +VE + G+PVLVG+
Sbjct: 379 EEEEFRKIYGLDVIAIPTNKPMIRIDHPDVVYKTVKAKFKAVADDVEERHKRGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SEYLS +L ++GIPH VLNA K+ REAE VAQAGR A+TI+TNMAGRGTDI+
Sbjct: 439 VSIEKSEYLSQILTRRGIPHQVLNA--KHHEREAEIVAQAGRFGAVTIATNMAGRGTDIL 496
Query: 398 LGGNPKMLAKK 408
LGGNP A++
Sbjct: 497 LGGNPDFAARQ 507
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 163/351 (46%), Gaps = 72/351 (20%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V+ +GGL VIGT HE+RRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 558 VRAVGGLCVIGTERHEARRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--GEMVQN 615
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHV--YDLR 648
L++++ ++D+PI+ + R + Q E F IR KHV YD
Sbjct: 616 LMNKLGIEDDVPIDSPMVSRAIENAQKKVEARNFDIR--------------KHVLQYD-- 659
Query: 649 QSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDL 708
++ E +Q Q ++ + + + +L A A I+++
Sbjct: 660 -DVMNTQRELIYKQRRQILEG-----------------HDTREVVLDAIAATAQSIVEE- 700
Query: 709 FAGISGDTLLKS-----IEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
G+ D + + L E N I DL G+RR+
Sbjct: 701 --GVPEDVYFEEWDPSILVALAEDNGIPKGAVNVEDLKAA---VEGVRRE---------- 745
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+ GR + L K + I +Y +E+R M+++ER +L++T+D W
Sbjct: 746 ------QEGREK-----LAKVIEQAAIRAYEE--KEARLGAETMRQLERFLLLRTVDEKW 792
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
DHL M+ L V +R++G R+PL EYK++ F +M+ + +R V +L
Sbjct: 793 MDHLDAMDDLREGVGLRAYGQRDPLIEYKMEAMEMFNNMIRSIQRDMVRNL 843
>gi|237786067|ref|YP_002906772.1| preprotein translocase subunit SecA [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758979|gb|ACR18229.1| preprotein translocase subunit [Corynebacterium kroppenstedtii DSM
44385]
Length = 911
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 293/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQ++G A LH GS+AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHFPVQVMGAASLHFGSVAEMKTGEGKTLTCVLPAYLNALEGKGAHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL V +I GM PEERR Y DITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHRFLGLKVDVILSGMTPEERRQAYNADITYGTNNEFGFDYLRDNMAHSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++ + + +HY V+ +
Sbjct: 200 G---HHYAIVDEVDSILIDEARTPLIISGPAEGTSEWYTAFARIVPRMSRDIHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ L E L ++L+ +N ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGIREEGVELVEDQLGIDNLYAPQNSQLVGYLNNAIKAKELFVRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++IQA++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRVLSGRRYNEGMHQAIEAKEGVEIQAENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V ++PTN PN R+D + T K+ ++E + G+PVLVG+
Sbjct: 377 EASELHQIYKLDVNQIPTNRPNQRIDKSDLVYKTQEAKFRAVADDIEERVQKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+ +G+ H+VLNA K+ EA+ VAQAGR A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSHLLQSKGVRHSVLNA--KHHEEEAQVVAQAGRLGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + R L
Sbjct: 495 LGGNPDIIADINLRQRRL 512
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 161/353 (45%), Gaps = 67/353 (18%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV GGL+V+GT HESRRIDNQLRGR RQGDPG TRF +S++DE+ +F +
Sbjct: 539 EAKEVCEAGGLYVLGTERHESRRIDNQLRGRCARQGDPGETRFYLSMRDELMTRFVGPSM 598
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A +++R+ +D+PIE + + Q E F +RK+++++DEV+ QRK +Y
Sbjct: 599 EA--MMNRLNVPDDVPIEAKMVTNAIKSAQTQVESQNFEMRKNVLKYDEVMNSQRKVIYA 656
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGK 703
R+ IL G + + ++A++D+ I V Y W L L ++ G
Sbjct: 657 ERRQILEGLD------LRDQVRAMIDDTISAYVYAETADGYVEDWDLGALWNALESLYGP 710
Query: 704 ILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
+ S +L+ S E P +LP
Sbjct: 711 TM-------SWQSLIDSSEYGP-----------AGELP---------------------- 730
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASY--LNVVQESRYDDVYMKEVERAVLVKTLDC 821
+DL R+ L D +A Y L V E+ D M+ +ER L+ +D
Sbjct: 731 -VEDL-------------RRALIDDALAQYEDLEKVVEAIGGDEQMRNLERYTLLNVVDQ 776
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
WR+HL M+ L + +R+ R+PL EY+ +G F M + V L
Sbjct: 777 KWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGGDMFRKMEDGIKEEAVRQL 829
>gi|430748511|ref|YP_007211419.1| Preprotein translocase subunit SecA [Thermobacillus composti KWC4]
gi|430732476|gb|AGA56421.1| preprotein translocase, SecA subunit [Thermobacillus composti KWC4]
Length = 839
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 291/423 (68%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 80 MRHFDVQLIGGMVLHEGKIAEMKTGEGKTLVATLAAYLNALEGKGVHVVTVNDYLAQRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M ++++FLGL+VG G+ +++ Y DITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 TMMGQIYQFLGLTVGCNLHGLTHAQKQEAYNADITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAI+DEVDS+LIDE R PL+ISG+A+K Y A + L + YT+++K
Sbjct: 200 R---PLNFAIIDEVDSILIDEARTPLIISGQAAKSTELYYAADRFVRTLKEEEDYTIDVK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE G+ AE A ++L+D N V ALKA +RDV Y+V++G+ +I
Sbjct: 257 MRSVTLTEAGVEKAERAFGIDNLFDHANVTLNHHVQQALKAHAIMKRDVDYVVQDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE LK+Q +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMAGRRYSDGLHQAIEAKEQLKVQNESMTLATITFQNYFRMYRKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V++VPTN P IRVD+P + TA K++ +E+ + G+PVLVG
Sbjct: 377 TEEEEFKKIYGLDVVQVPTNKPMIRVDMPDIVYKTANAKFKAVVEEIVKRHQNGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS++LK++GIPH VLNA KY A EAE +A+AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIENSEKLSEMLKRRGIPHKVLNA--KYHAEEAEIIARAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 LLG 497
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F ++L DE+ ++F +
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLALDDELMRRFGSENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ ED PIE + R + Q E F R+ ++++D+V+ QR+ +Y
Sbjct: 557 G--MMDRLGFSEDEPIESKLVSRAIESAQKRVEGSNFDTRRIVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L N + +F ++ VV+ I+ + P W+LD ++
Sbjct: 615 RREVLFADN--IREHVFDMIRPVVERIVEAHCADEDIPEEWNLDAIV 659
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
M+E E+ V+++ +D W DH+ M++L +++R++G +PL EY+ +G F M+
Sbjct: 709 MREFEKVVVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFREMV 765
>gi|451333187|ref|ZP_21903774.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Amycolatopsis azurea DSM 43854]
gi|449424550|gb|EMD29849.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Amycolatopsis azurea DSM 43854]
Length = 943
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/471 (46%), Positives = 309/471 (65%), Gaps = 34/471 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G ++EMKT V+TVNDYLA+RDAE
Sbjct: 79 RPYDVQLMGGAALHLGQVSEMKTGEGKTLTQVLPAYLNAVSGKGVHVITVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGL VG+I PE RR Y DIT+ N+E GFDYLRDN+A + E V R
Sbjct: 139 WMGRIHRFLGLEVGVILADQTPEVRRQQYAADITHGTNNEFGFDYLRDNMAWSLEDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y A++ L+ +HY V+++
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARMTPLMKVDIHYEVDIRK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE+G+A E L +L++ N P ++ NALK KE Y+RD YIVR+G+ LI+
Sbjct: 256 RTVGVTEKGVAFVEDQLGIENLYEAANTPLVGYLNNALKVKELYKRDKDYIVRDGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 316 DEFTGRILHGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYGKLSGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P +R D + T + K+E +++ G+PVLVG+
Sbjct: 376 EAAEFHQTYKLGVVPIPTNKPMVRADQADLIYKTEQAKFEAVAEDIAERHEKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS LL + G+PH VLNA K+ REA VA+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVEKSEHLSKLLLKLGVPHEVLNA--KHHDREALIVARAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLA 448
LGGNP ++A +++ DR L + + + + + PKVL E + + + A
Sbjct: 494 LGGNPDIIADEVLRDRGL-----DPVEHSEEYEAAWPKVLEEAQADTKAEA 539
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ + E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 527 VLEEAQADTKAEAEEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + + + Q E+ IRK+++++DE
Sbjct: 587 ELMRRFNATMVERVMTTMRLPD--DVPIEHKMVSKAIKSAQTQVEQQNMEIRKNVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV-----DEIIFGNVDPLKHPRYWSL 690
V+ QRK +Y R +L G E +QI + V+ +E G + H + W+
Sbjct: 645 VMNEQRKVIYAERLRVLEG--EDLREQIEHMLVDVINAYVNEETSSGYAEDWDHEKLWTA 702
Query: 691 DKLL 694
K L
Sbjct: 703 LKTL 706
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ LD WR+HL M+ L + +R+ R+P+ EY+ +G F +ML +
Sbjct: 755 MRSLERQVMLTVLDRKWREHLYEMDYLKEGIGMRALAQRDPVIEYQREGYDMFRAMLESL 814
Query: 867 RRLTV 871
+ V
Sbjct: 815 KEEAV 819
>gi|134300909|ref|YP_001114405.1| preprotein translocase subunit SecA [Desulfotomaculum reducens
MI-1]
gi|189046163|sp|A4J927.1|SECA_DESRM RecName: Full=Protein translocase subunit SecA
gi|134053609|gb|ABO51580.1| protein translocase subunit secA [Desulfotomaculum reducens MI-1]
Length = 873
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/431 (50%), Positives = 294/431 (68%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH G IAEM+T V+TVNDYLA RD+
Sbjct: 79 MRHYDVQLIGGMVLHQGRIAEMRTGEGKTLVATLPVYLNALSGKGVHVITVNDYLATRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGLSVGLI G+ PE+RR Y DITY N+E GFDYLRDN++ + EQLV
Sbjct: 139 EWMGKLYRFLGLSVGLIVHGIKPEDRRLAYNADITYGTNNEFGFDYLRDNMSLHPEQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +++IVDEVDS+LIDE R PL+ISG A K Y AK+ LV+ + YTV+ K
Sbjct: 199 R---ELNYSIVDEVDSILIDEARTPLIISGVADKPTHLYYTMAKIVPKLVREVDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
++V LTEEG++ AE L +L+DE + +N +LKA RD Y+VR+G+ +I
Sbjct: 256 AHNVLLTEEGVSKAEKLLGIENLYDEANMEINHHLNQSLKAHGLMHRDRDYVVRDGEVVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y K++GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYNKIAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P IR DL + T K+ ++V G+PVLVG
Sbjct: 376 TEEEEFRKIYGLDVVVIPTNKPTIRKDLADLVYKTEMAKFRAVVEDVVQRHETGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ SE LS LLK++G+PH VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIAKSELLSSLLKRRGVPHQVLNA--KHHDKEAEIIAQAGRFKAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAK 407
+LGGNP++ A+
Sbjct: 494 LLGGNPEVFAR 504
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ E ++V GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F ++L+D++ + F
Sbjct: 532 CNEERAKVMEKGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYIALEDDLMRLFGS 591
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D L+ R+ +ED+PIE I + + Q E F IRK ++++D+V+ QR+
Sbjct: 592 DNIAG--LMDRLGMEEDVPIENALITKSIETAQKRVESRNFSIRKHVLDYDDVMNQQREV 649
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
+Y R+ +LTG N ++ I + AVV+ + H W L LL+
Sbjct: 650 IYAQRRKVLTGHN--LAENIKDTITAVVERSVDMYCPEGVHEEEWDLAGLLE 699
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
++E+ER VL++ +D W DHL M++L + +R++G ++P+ EYK + F +M++
Sbjct: 748 LREIERIVLLRLVDEKWMDHLDAMDQLREGIGLRAYGSKDPVIEYKFEAYEMFNNMIA 805
>gi|94985162|ref|YP_604526.1| preprotein translocase subunit SecA [Deinococcus geothermalis DSM
11300]
gi|172046728|sp|Q1IZH7.1|SECA_DEIGD RecName: Full=Protein translocase subunit SecA
gi|94555443|gb|ABF45357.1| preprotein translocase, SecA subunit [Deinococcus geothermalis DSM
11300]
Length = 869
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/447 (50%), Positives = 289/447 (64%), Gaps = 39/447 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH G IAEM+T +VTVNDYLA+ AE
Sbjct: 80 RHYDVQLIGGTALHQGRIAEMRTGEGKTLVATLALALNALEGKGAHLVTVNDYLARVGAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGLSVGLI R M P +R++ Y CDITY NSELGFDYLRDN+A + EQLV+R
Sbjct: 140 EMGLLYRTLGLSVGLITRDMQPHQRQAAYACDITYVTNSELGFDYLRDNMAQSREQLVLR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P H+AIVDEVDS+LIDE R PL+ISG A K Y V AK+ + L +G
Sbjct: 200 ADNPLHYAIVDEVDSILIDEARTPLIISGAAEKATDLYYVYAKLVKRLQRGEPAEPGKRT 259
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YT++ K V LTE+GIA E L DL+ EN A + A++A+E Y R+
Sbjct: 260 EPTGDYTIDEKGKQVHLTEQGIAKIERLLSLGDLYSPENMDKAHMITQAIRARELYHREK 319
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +II+E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 320 DYIVNAEGEVVIIDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRL 379
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEFL ++ V+ +PTN P IR D + T GK++ +EV+
Sbjct: 380 YDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNKPVIRQDADDLVYRTRMGKYQAVVEEVK 439
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
M GRP+L+G+ S++ SE LS LLKQ GI H+VLNA KY A+EA +AQAGR +T
Sbjct: 440 QMHATGRPILIGTASIDTSEQLSALLKQAGIRHSVLNA--KYEAQEASIIAQAGRSGTVT 497
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIE 411
I+TNMAGRGTDI+LGGN + + + IE
Sbjct: 498 IATNMAGRGTDIMLGGNAEFILGEAIE 524
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 96/164 (58%), Gaps = 4/164 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V+ LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF VS +D++ + F+ D V
Sbjct: 582 VRELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSFEDDLMRLFASD--RVVA 639
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ R+ D+ PIE + + Q E FGIRK L+EFD V+ QR +Y R+
Sbjct: 640 MMDRLGMDDTQPIEAKMVTGAIERAQARVEDRNFGIRKQLLEFDNVMSKQRDIIYAQRRE 699
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP-RYWSLDKL 693
+L G +E + + M A E+ P+ P W L+ L
Sbjct: 700 VLLGTDEDVEEST-EGMIADFTEMQLAFYAPIDQPAESWDLETL 742
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+ + R VL++ +D W++HL M+ L + +R +G R+P EYK + F M+
Sbjct: 793 LNSLARYVLLQVVDQHWKEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATNMFNDMI 849
>gi|404495812|ref|YP_006719918.1| preprotein translocase subunit SecA [Geobacter metallireducens
GS-15]
gi|418067825|ref|ZP_12705157.1| preprotein translocase, SecA subunit [Geobacter metallireducens
RCH3]
gi|123572413|sp|Q39X31.1|SECA_GEOMG RecName: Full=Protein translocase subunit SecA
gi|78193426|gb|ABB31193.1| preprotein translocase, SecA subunit [Geobacter metallireducens
GS-15]
gi|373558152|gb|EHP84510.1| preprotein translocase, SecA subunit [Geobacter metallireducens
RCH3]
Length = 899
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/450 (48%), Positives = 292/450 (64%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHSGKIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R++ FLGLSVG+I G+ EERR Y DITY N+E GFDYLRDN+ + + V
Sbjct: 141 DWMGRIYNFLGLSVGVIVHGLDDEERREAYAADITYGTNNEFGFDYLRDNMKFSLDDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R PF+F+IVDEVDS+LIDE R PL+ISG +Y + +V L +G
Sbjct: 201 R---PFYFSIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRVIPHLKKGEMKEVEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAK 198
+TV+ K S LTEEG+ E L+ ++L+D + V AL+A
Sbjct: 258 TLSGKKKEYTGDFTVDEKARSATLTEEGVLKVEKLLKIDNLYDPRHMEFLHHVNQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
+RRDV Y+V+ G+ +I++E TGR+ RRWS+G+HQA+EAKEG++I+ ++ +A IT+
Sbjct: 318 ALFRRDVDYVVKEGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGVEIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE +EF K++++ V +PTN P +R D P + T R K+
Sbjct: 378 QNYFRMYEKLSGMTGTADTEAEEFHKIYKLDVTVIPTNRPLLRPDFPDVIYKTEREKFAA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+E++ + G+PVLVG+ S+E SE LS+LLK+QGIPHNVLNA K REAE VAQAG
Sbjct: 438 VIEEIKDCHQKGQPVLVGTISIEKSEILSELLKKQGIPHNVLNA--KQHEREAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
RK +TI+TNMAGRGTDI+LGGNP LAK+
Sbjct: 496 RKGMLTIATNMAGRGTDIVLGGNPDSLAKQ 525
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y ++L + C+ E EV +LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 538 YAAILAKYKAECAAEHDEVVKLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLS 597
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + ++ + +E I I + + Q E + F IRK L+E
Sbjct: 598 LEDDLLRIFG--SERVSKIMDFLKIEEGEAITHGMITKAIENAQKKVEAHNFEIRKHLIE 655
Query: 633 FDEVLEVQRKHVYDLRQSILTGAN 656
+D+V+ QR+ +Y R+ IL G +
Sbjct: 656 YDDVMNKQREVIYTQRREILAGED 679
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ + D M + + ++++ +D W+DHL++++ L + +R +G ++P +EYK + R F
Sbjct: 758 ASFGDELMDHLIKVIMLQAIDSQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKKEAYRLF 817
Query: 860 ISMLSATRRLTVESLVQYW 878
+ M++ TVE + +W
Sbjct: 818 MDMMARIAEETVEKI--FW 834
>gi|217967792|ref|YP_002353298.1| preprotein translocase subunit SecA [Dictyoglomus turgidum DSM
6724]
gi|217336891|gb|ACK42684.1| preprotein translocase, SecA subunit [Dictyoglomus turgidum DSM
6724]
Length = 787
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/423 (50%), Positives = 290/423 (68%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VLH G IAEM+T +VTVNDYLA+RD
Sbjct: 78 MRHFDVQIMGGIVLHQGKIAEMQTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM ++ FLGL VGL+Q ER+ Y DITY N+E GFDYLRDN+A + +QLV
Sbjct: 138 YWMGPIYEFLGLKVGLLQNDTPILERKKAYMADITYGTNNEFGFDYLRDNIALSPDQLVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A + Y +A + A L + + YT + K
Sbjct: 198 R---ELNYAIVDEVDSILIDEARTPLIISGPAKGESHIYKLAIRAARYLKKDVDYTTDEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG+ AE L DL+D +N A ++ LKA FY RD YIV++G+ +I
Sbjct: 255 TKTVSLTEEGLRKAESFLGVKDLYDFKNMGLAHALLQCLKALNFYHRDRDYIVKDGEVII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG++I+ ++V +A I+ Q+ F++Y KL+GMTGTA
Sbjct: 315 VDEFTGRLMFGRRYSDGLHQAIEAKEGVRIREENVTLATISIQNYFRMYKKLAGMTGTAA 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ + V+ +P N P R++ P F T K+E +E+E M+++GRPVLVG
Sbjct: 375 TEEEEFVKIYGLEVVVIPPNKPLRRINYPDVIFRTEEEKFEAVVKEIEEMYKIGRPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK++GIPHNVLNA KY +EAE +A+AG+KYA+TI+TNMAGRGTDI
Sbjct: 435 TTSIEKSERLSKMLKKKGIPHNVLNA--KYHEKEAEIIAKAGQKYAVTIATNMAGRGTDI 492
Query: 397 ILG 399
+LG
Sbjct: 493 VLG 495
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F D
Sbjct: 495 GEGVAELGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLLRLFGGDQIK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A L+ R+ + PIE + R + Q E+ F IRK L+E+D+VL QR VY
Sbjct: 555 A--LMERLGMERGQPIESPLLTRIIENSQAKVERMNFEIRKQLLEYDDVLNTQRDIVYKE 612
Query: 648 RQSILTGAN-ESCSQQIFQYMQAVVDEII 675
R+ IL N E Q+I M V+D+
Sbjct: 613 RRKILLMDNLEEIVQRI---MNRVLDKFF 638
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE++R VL+ +D W +HL +M L + +R+ H +PL EYK + + F M+ +
Sbjct: 702 KEIQRIVLLYVIDKLWIEHLNDMEALRDGIGLRAIAHHDPLVEYKKEAYQMFQDMVESFE 761
Query: 868 RLTVESLVQYWSSPMESQ 885
++ L S E++
Sbjct: 762 WESIRYLFNIHISTQETK 779
>gi|256750899|ref|ZP_05491783.1| preprotein translocase, SecA subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|256750234|gb|EEU63254.1| preprotein translocase, SecA subunit [Thermoanaerobacter
ethanolicus CCSD1]
Length = 897
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 289/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMDPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A K Y +A + L + Y V+ K
Sbjct: 200 RG---LNYAIVDEVDSILIDEARTPLIISGIAEKSTDMYKLADRFVRTLRKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGIVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HESRRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGESRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + I + ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESILEMVKSIIERNVEIYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|325294738|ref|YP_004281252.1| protein translocase subunit secA [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065186|gb|ADY73193.1| Protein translocase subunit secA [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 858
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 295/443 (66%), Gaps = 35/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 88 MRHYDVQLIGGMVLHQGKIAEMRTGEGKTLVATLPVYLNALAGKGVHVVTVNDYLAKRDA 147
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+ +LGLSVG +Q M E+R+ Y DITY NSE GFDYLRDN+A + ++ V
Sbjct: 148 EWMGPVYNYLGLSVGYLQNNMEKEQRKEMYSRDITYGTNSEFGFDYLRDNMAFSKDEKVQ 207
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R FAIVDE DS+LIDE R PL+ISG + ++V Y +A + L + H+ V+ K
Sbjct: 208 R---ELFFAIVDEADSILIDEARTPLIISGPSEENVDVYYIADAIVRQLKKDKHFEVDEK 264
Query: 158 NNSVELTEEGIALAEMALET-NDLWDEN--DP----WARFVMNALKAKEFYRRDVQYIVR 210
+ LT+EGI E + + + D N DP ++ +L+A +++DV Y+V+
Sbjct: 265 TKTAVLTDEGIREVEKIVSSMTGIKDFNLYDPKFSDLLHAIIQSLRAHHLFKKDVDYVVK 324
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +I++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A IT Q+ F+LY KL+G
Sbjct: 325 DGKVVIVDEFTGRIMPGRRWSDGLHQAVEAKEGVKIEAENQTLATITLQNYFRLYKKLAG 384
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA+TE E +++ + V+ +PTN P IR D P F T + K+ +E+E ++ G
Sbjct: 385 MTGTAETEAAELKEIYGLDVVVIPTNKPVIRKDHPDLIFKTMKAKYNAVVKEIEENYKKG 444
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
RPVLVG+ S+E SEYLS LLK++GIPH VLNA K+ REAE VAQAGR A+TI+TNMA
Sbjct: 445 RPVLVGTNSIEASEYLSRLLKKKGIPHQVLNA--KHHEREAEIVAQAGRLGAVTIATNMA 502
Query: 391 GRGTDIILGGNPKMLAKKIIEDR 413
GRGTDI+LGGNP+ LAKK +E +
Sbjct: 503 GRGTDILLGGNPEFLAKKELEKK 525
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLIS 593
LGGL++IGT +ESRRIDNQLRGRAGRQGDPG +RF +SL+D + + F D + +
Sbjct: 562 LGGLYIIGTERNESRRIDNQLRGRAGRQGDPGESRFFLSLEDNLLRLFGSDRIKKMMEMM 621
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
+ +DE PI + + L Q E+ F IRK L+E+DEV VQRK +YD R +L
Sbjct: 622 NVPDDE--PITHKMVSKALENAQRRVEQQNFQIRKRLLEYDEVYNVQRKVIYDQRNKVLE 679
Query: 654 GANESCSQQIFQYMQAVVDEII--FGNVDPLKHPRYWSLDKLLKEFIAIAG 702
G E + I +M+ V E++ + V+ L P W L L K A G
Sbjct: 680 G--EDFKEDILYFMEEVAKEMVENYAPVNVL--PDEWDLSALKKALEARFG 726
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 47/72 (65%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER ++++TLD +WR HL+ ++ + ++ R +G R+P+ E+K + + F ++S
Sbjct: 777 LREIERMIMLQTLDHYWRQHLLALDHIKESIGWRGYGQRDPIVEFKKEAFQLFEELISNI 836
Query: 867 RRLTVESLVQYW 878
+ TV+ L Y+
Sbjct: 837 QNGTVDGLFNYY 848
>gi|258517065|ref|YP_003193287.1| preprotein translocase subunit SecA [Desulfotomaculum acetoxidans
DSM 771]
gi|257780770|gb|ACV64664.1| preprotein translocase, SecA subunit [Desulfotomaculum acetoxidans
DSM 771]
Length = 872
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 297/441 (67%), Gaps = 29/441 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 79 MRHFDVQLIGGMVLHQGRIAEMKTGEGKTLVATLPVYLNALTGQGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++FLGLSVGLI G+ ER++ Y DITY N+E GFDYLRDN+A + E L
Sbjct: 139 EWMGHIYKFLGLSVGLIVHGLDQYERKTAYGSDITYGTNNEFGFDYLRDNMAVHPEHLAQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+A K Y AK+ L YTV+ K
Sbjct: 199 RQ---LNYAIVDEVDSILIDEARTPLIISGQADKATDHYYTFAKLVPRLTVEKDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
++V LTEEG+A AE L +L+D+++ +N ALKA ++D Y+V+ G+ +I
Sbjct: 256 AHTVALTEEGVAHAEKLLGVGNLFDDSNMQLNHYLNQALKAHALMKKDRDYVVKEGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQ++EAKEG+ I+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQSIEAKEGVHIERESQTLATITFQNYFRMYNKLAGMTGTAA 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ VPTN NIR D+P + T K+ A +++ + G+P+LVG
Sbjct: 376 TEEEEFRKIYGLDVVVVPTNKDNIRKDMPDVVYKTENAKFNAAVEDIAARHANGQPILVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++G+PH VLNA K+ +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEVLSAMLKRKGVPHQVLNA--KFHEKEAEIVAQAGRFGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKIIEDRLLLL 417
+LGGNP+ L++ I + L L
Sbjct: 494 LLGGNPEFLSQAEIRSKGLSL 514
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 67/339 (19%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E + V LGGLH++GT HESRRIDNQLRGR GRQGDPGS++F SL+D++ + F +
Sbjct: 535 ERNRVLDLGGLHIMGTERHESRRIDNQLRGRGGRQGDPGSSQFFSSLEDDLMRLFGAENI 594
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
L+ ++ +ED+PIE I + + Q E F RK ++++D+V+ QR+ +Y
Sbjct: 595 SG--LMDKLGLEEDVPIEHVLITKSIETAQKRVESRNFDARKHVLQYDDVMNQQRELIYK 652
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ +L G E+ + + Q ++ VVD ++ NV ++ + + +E +AG
Sbjct: 653 QRREVLAG--ENMQENVRQMIEKVVDNVL--NV--------YAAEGVYQEEWDLAG---- 696
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
LL+ E+L + PD NL G
Sbjct: 697 ----------LLEQAEQL-----------FLPD----HNLTVG----------------- 714
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+L G+ +L K L DI A + E+ M+E+ER V++K +D W DH
Sbjct: 715 ELEDRGKKDLRDFILEKAL-DIYNAKEAELGYET------MRELERVVILKIVDEKWMDH 767
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
L M++L V +R++G ++PL EYK +G F +M+ +
Sbjct: 768 LDAMDQLREGVGLRAYGQKDPLVEYKFEGYEMFQNMIDS 806
>gi|167038150|ref|YP_001665728.1| preprotein translocase subunit SecA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116559|ref|YP_004186718.1| preprotein translocase subunit SecA [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856984|gb|ABY95392.1| preprotein translocase, SecA subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929650|gb|ADV80335.1| preprotein translocase, SecA subunit [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 897
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 289/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMDPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A K Y +A + L + Y V+ K
Sbjct: 200 R---ELNYAIVDEVDSILIDEARTPLIISGIAEKSTDMYKLADRFVRTLRKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGIVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HE+RRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHEARRIDNQLRGRAGRQGDPGESRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + I + ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESILEMVKSIIERNVEIYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|167039138|ref|YP_001662123.1| preprotein translocase subunit SecA [Thermoanaerobacter sp. X514]
gi|300913272|ref|ZP_07130589.1| preprotein translocase, SecA subunit [Thermoanaerobacter sp. X561]
gi|307723714|ref|YP_003903465.1| preprotein translocase subunit SecA [Thermoanaerobacter sp. X513]
gi|166853378|gb|ABY91787.1| preprotein translocase, SecA subunit [Thermoanaerobacter sp. X514]
gi|300889957|gb|EFK85102.1| preprotein translocase, SecA subunit [Thermoanaerobacter sp. X561]
gi|307580775|gb|ADN54174.1| preprotein translocase, SecA subunit [Thermoanaerobacter sp. X513]
Length = 897
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 289/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMDPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A K Y +A + L + Y V+ K
Sbjct: 200 RG---LNYAIVDEVDSILIDEARTPLIISGIAEKSTDMYKLADRFVRTLRKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGVVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HESRRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGESRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + I + ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYVQRRKVLEG--ENLKESILEMVKSIIERNVEIYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|441205718|ref|ZP_20972738.1| preprotein translocase, SecA subunit, partial [Mycobacterium
smegmatis MKD8]
gi|440628970|gb|ELQ90764.1| preprotein translocase, SecA subunit, partial [Mycobacterium
smegmatis MKD8]
Length = 926
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 295/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPSYLNALSGKGVHVVTVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I GM P+ERR+ Y DITY N+E GFDYLRDN+A + + +V R
Sbjct: 138 WMGRVHRFLGLDVGVILSGMTPDERRAAYAADITYGTNNEFGFDYLRDNMAHSVDDMVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++ ++ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASHWYQEFARIVPMMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE ++RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFQRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMVRQDQSDLIYKTEEAKFLAVVDDVAERHAKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +L ++ +PHNVLNA KY +EA +A+AGR+ A+T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSKMLTKRRVPHNVLNA--KYHEQEANIIAEAGRRGAVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA K + +R L
Sbjct: 493 LGGNVDFLADKRLRERGL 510
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C+ E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 VLPQVKAECAKEAEQVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T L++R+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 586 ELMRRFNGATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFEVRKNVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVD 672
V+ QRK +Y R+ IL G N E + + + A VD
Sbjct: 644 VMNQQRKVIYAERRRILEGENLAEQAHKMLVDVITAYVD 682
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML A
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEAL 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|453381976|dbj|GAC83444.1| protein translocase subunit SecA [Gordonia paraffinivorans NBRC
108238]
Length = 942
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/429 (50%), Positives = 289/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALTGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P RR Y DITY N+E GFDYLRDN+A + +LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMTPAARREAYAADITYGTNNEFGFDYLRDNMAHSLAELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HNYAIVDEVDSILIDEARTPLIISGPAEGSSKWYVEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ LI+
Sbjct: 255 KTVGIHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV E RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLEGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ VI +PTN P IR D + T K+ ++ R G+PVLVG+
Sbjct: 375 EAAEFDQIYKLGVIPIPTNRPMIRKDQGDLIYKTEEAKFAAVVDDIVERHREGQPVLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK+ GIPH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQLKKAGIPHSVLNA--KFHEQEAQIIAEAGRIGAVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 59/344 (17%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V+++GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+ A+
Sbjct: 541 VRKVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNGGALEAI- 599
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+SR+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 -MSRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNQQRKVIYAERRK 656
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFA 710
IL G E +QI Q + VV + G + W LD+L + LD
Sbjct: 657 ILEG--EDHHEQIKQMIDDVVSAYVEGATAE-GYAEDWDLDELTTALRTLYPMELD--LR 711
Query: 711 GISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTK 770
+ G+T E ++++ ++ + D +++ KR AI DD+
Sbjct: 712 EVVGET---EYGERDDISAEELRDILVADA------------RAAYDKREKAI--DDVAG 754
Query: 771 NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
G R ++ER+VL+ LD WRDHL M
Sbjct: 755 EGAMR---------------------------------QLERSVLLSVLDRKWRDHLYEM 781
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ L +++RS R+P+ EY+ +G F ML + T+ L
Sbjct: 782 DYLREGIHLRSMAQRDPVVEYQREGYDMFQGMLEGLKEETLSIL 825
>gi|118471837|ref|YP_886246.1| preprotein translocase subunit SecA [Mycobacterium smegmatis str.
MC2 155]
gi|399986258|ref|YP_006566607.1| protein translocase subunit secA [Mycobacterium smegmatis str. MC2
155]
gi|166897631|sp|P71533.2|SECA1_MYCS2 RecName: Full=Protein translocase subunit SecA 1
gi|118173124|gb|ABK74020.1| preprotein translocase, SecA subunit [Mycobacterium smegmatis str.
MC2 155]
gi|399230819|gb|AFP38312.1| Protein translocase subunit secA [Mycobacterium smegmatis str. MC2
155]
Length = 953
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 295/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPSYLNALSGKGVHVVTVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I GM P+ERR+ Y DITY N+E GFDYLRDN+A + + +V R
Sbjct: 138 WMGRVHRFLGLDVGVILSGMTPDERRAAYAADITYGTNNEFGFDYLRDNMAHSVDDMVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++ ++ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASHWYQEFARIVPMMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE ++RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFQRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMVRQDQSDLIYKTEEAKFLAVVDDVAERHAKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +L ++ +PHNVLNA KY +EA +A+AGR+ A+T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSKMLTKRRVPHNVLNA--KYHEQEANIIAEAGRRGAVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA K + +R L
Sbjct: 493 LGGNVDFLADKRLRERGL 510
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C+ E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 VLPQVKAECAKEAEQVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T L++R+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 586 ELMRRFNGATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFEVRKNVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVD 672
V+ QRK +Y R+ IL G N E + + + A VD
Sbjct: 644 VMNQQRKVIYAERRRILEGENLAEQAHKMLVDVITAYVD 682
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML A
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEAL 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|354616648|ref|ZP_09034242.1| Protein translocase subunit secA, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353219001|gb|EHB83646.1| Protein translocase subunit secA, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 867
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/477 (46%), Positives = 310/477 (64%), Gaps = 34/477 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G AEMKT +VT NDYLAQRD+E
Sbjct: 79 RHFDVQLMGGAALHLGQAAEMKTGEGKTLTSVLPVYLNALAGRGVHIVTTNDYLAQRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I+ M RR YR DITY N+E GFDYLRDN+A + + V R
Sbjct: 139 WMGRVHRFLGLEVGVIRADMQSAARREAYRADITYGTNNEFGFDYLRDNMAWSLDDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A + Y A++A L+ + +HY V+ +
Sbjct: 199 ---GHYYAIVDEVDSILIDEARTPLIISGPADQSSRWYNEFARMAPLMTKDVHYEVDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L ++L++ N P F+ NALKAKE Y +D +YIVR G+ LI+
Sbjct: 256 RAVGVTEAGVEFVEDQLGIDNLYESANTPLISFLNNALKAKELYNKDKEYIVRGGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DEFTGRVLAGRRFNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+++PTN P IR D + + K+E ++ G+PVLVG+
Sbjct: 376 EAAEFHQTYKLGVVQIPTNKPMIRADEADLIYKSEPAKFEAVADDIAERHEKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS L ++ +PH VLNA+ + REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVEKSEFLSKALVKRNVPHEVLNAKQHH--REALIIAKAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAA 454
LGGNP ++A +++ +R L + + + + + PKVL E+ S + A +AA
Sbjct: 494 LGGNPDIIADEVLRERGL-----DPVEHSEEYEAAWPKVLEEVTAESETEAEEVRAA 545
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 527 VLEEVTAESETEAEEVRAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ ++ F+ + +++ + +++PIE + R + Q E+ IRK+++++DE
Sbjct: 587 DLMRR--FNAAMVERVMTTMKLPDEVPIEHKMVSRAIKSAQTQVEQQNMEIRKNVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD-----EIIFGNVDPLKHPRYWS 689
VL QRK +Y R+ +L G E +Q+ + V+ E G + H + W+
Sbjct: 645 VLNQQRKVIYTERRRVLEG--EDLREQVEHMLGDVIGAYVRAETAEGYAEDWDHEKLWT 701
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ +PL EY+ +G F +ML +
Sbjct: 756 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQADPLVEYQREGFDMFNAMLDSL 815
Query: 867 RR--------LTVESLVQYWSSPMES 884
+ L VE Q +P ++
Sbjct: 816 KEEAVGYLFNLQVEQTAQQQGAPQDA 841
>gi|392938876|ref|ZP_10304520.1| preprotein translocase, SecA subunit [Thermoanaerobacter
siderophilus SR4]
gi|392290626|gb|EIV99069.1| preprotein translocase, SecA subunit [Thermoanaerobacter
siderophilus SR4]
Length = 915
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 288/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMGPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 200 R---ELNYAIVDEVDSILIDEARTPLIISGIGEKSTDMYKLADRFVRTLRKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGIVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HE+RRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHEARRIDNQLRGRAGRQGDPGESRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + I + ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESILEMVKSIIERNVEIYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|406910490|gb|EKD50500.1| hypothetical protein ACD_62C00524G0002 [uncultured bacterium]
Length = 873
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/431 (48%), Positives = 288/431 (66%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VLHDG+IAEMKT +VTVNDYLA RDA
Sbjct: 80 MRHFDVQILGGMVLHDGNIAEMKTGEGKTLVATLPMYLNSLTGKGCHLVTVNDYLATRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V++FLGLSVG+I G+ ERR+ YR DITY N+E GFDYLRDN+ + + +
Sbjct: 140 EWMGHVYKFLGLSVGVILHGLNDAERRAAYRSDITYGTNNEFGFDYLRDNMKFSIQSMAQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
K FAIVDEVDS+LIDE R PL+ISG + +Y +V L HY VE K
Sbjct: 200 ---KKLSFAIVDEVDSILIDEARTPLIISGPSDPSTDKYVQVNRVIPGLKAEKHYHVEEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ S LTEEG+ E L +L+D +N V+ ALKA +++DV Y+V++G+ +I
Sbjct: 257 SRSATLTEEGVTEVEKRLGIENLYDPKNIESLHHVIQALKAHMVFKKDVDYVVKDGRVMI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQAVEAKE +++++++ +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRILPGRRWSDGLHQAVEAKEEVQVESENQTLAGITFQNYFRMYEKLAGMTGTAE 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + V+ +PTN P R D + + T K+ ++V+ +R GRP+L+G
Sbjct: 377 TEAEEFRKIYNLGVVSIPTNQPVCRTDRNDEIYKTEAAKFRAVVEDVKEEYRRGRPILIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE+LS LL + GI HNVLNA+ + REAE +AQAGR A+T+STNMAGRGTDI
Sbjct: 437 TIAIEKSEHLSKLLDRHGIKHNVLNAKNHF--REAEIIAQAGRLGAVTVSTNMAGRGTDI 494
Query: 397 ILGGNPKMLAK 407
LGGNP+ LAK
Sbjct: 495 KLGGNPQFLAK 505
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y VL + C E +V LGGL+V+GT HE+RRIDNQLRGR RQGDPG T+F +S
Sbjct: 517 YNDVLPKMKEQCIAEQKKVVGLGGLYVLGTERHEARRIDNQLRGRTARQGDPGQTKFYIS 576
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ ++F D + + R+ +ED I I + G Q E + F IRK ++E
Sbjct: 577 LEDDLMKRFGSDRISTI--MDRLGMEEDDAITHKWITGAIEGAQRKVEGHNFDIRKHVLE 634
Query: 633 FDEVLEVQRKHVYDLRQSILTG 654
+D+V+ QR +Y R+ IL G
Sbjct: 635 YDDVMNQQRTAIYTRRRKILAG 656
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 815 LVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
L++TLD W+DHL+ M+ L + +R +GH++P EYK +G F +M
Sbjct: 747 LLQTLDDLWKDHLLTMDHLREGIGLRGYGHKDPKSEYKREGFTMFENM 794
>gi|383818057|ref|ZP_09973355.1| preprotein translocase subunit SecA [Mycobacterium phlei
RIVM601174]
gi|383339302|gb|EID17638.1| preprotein translocase subunit SecA [Mycobacterium phlei
RIVM601174]
Length = 943
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/442 (49%), Positives = 297/442 (67%), Gaps = 29/442 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQ++GGA LH G++AEMKT +VTVNDYLA+RDAE
Sbjct: 78 RHFHVQVMGGAALHFGNVAEMKTGEGKTLTAVLPAYLNALSGKGVHIVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGLSVG+I GM P+ERR+ Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 QMGRVHRFLGLSVGVILSGMTPDERRAAYAADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A Y A++A ++ + +HY V+L+
Sbjct: 198 G---HNYAIVDEVDSILIDEARTPLIISGPADGASHWYQEFARLAPMMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLVGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IRVD + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRVDHSDLIYKTEEAKYLAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ IPHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRIPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLLLLLT 419
LGGNP L K + ++ L +T
Sbjct: 493 LGGNPDFLVDKRLREQGLDPVT 514
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 68/395 (17%)
Query: 495 LIDKQSAMYPLGPTVA-----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRR 549
L+DK+ L P + +L + C+ E EV GGL+V+GT HESRR
Sbjct: 500 LVDKRLREQGLDPVTTPDEYEQAWHEMLPKVKEECAREAEEVIAAGGLYVLGTERHESRR 559
Query: 550 IDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIV 609
IDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ T A L++R+ +D+PIE +
Sbjct: 560 IDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGATLEA--LLTRLNLPDDVPIEAKMVT 617
Query: 610 RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQA 669
R + Q E+ F IRK ++++DEV+ QRK +Y+ R+ IL G E+ Q ++
Sbjct: 618 RAIKSAQTQVEQQNFEIRKQVLKYDEVMNQQRKVIYEERRRILEG--ENLRDQALGMIRD 675
Query: 670 VVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPE 726
V+ + G + W L++L L++ I+ D + + G+ + EEL E
Sbjct: 676 VITAYVEGATAE-GYAEDWDLEQLWTALRQLYPISVDHHDLIDSDAVGEPGELTREELLE 734
Query: 727 LNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLG 786
+ D Y +R + D++ G A L R L
Sbjct: 735 VLIADAERAY------------------EERERQI----DEIAGEG---AMRQLERNVLL 769
Query: 787 DILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRN 846
++L + +E Y+ Y+KE + +R+ R+
Sbjct: 770 NVLDRKW----REHLYEMDYLKE--------------------------GIGLRAMAQRD 799
Query: 847 PLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
PL EY+ +G FI+ML + +V L P
Sbjct: 800 PLVEYQREGYDMFIAMLEGLKEESVGFLFNVQVEP 834
>gi|269925927|ref|YP_003322550.1| Preprotein translocase subunit SecA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789587|gb|ACZ41728.1| preprotein translocase, SecA subunit [Thermobaculum terrenum ATCC
BAA-798]
Length = 899
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/469 (47%), Positives = 304/469 (64%), Gaps = 47/469 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG VLH G++AEMKT VVTVNDYLA+RDA
Sbjct: 80 VRHFDVQLMGGIVLHQGNVAEMKTGEGKTFVAPLAAYLNALEGRGVHVVTVNDYLARRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRG---------------MIPEERRSNYRCDITYTNNSELGFD 82
+WM +V+ +LGL+VG +Q + P RR Y D+TY N+E GFD
Sbjct: 140 QWMGKVYHYLGLTVGCLQHEAAYVFDPDYSGDLEMLRPVPRREAYEADVTYGTNNEFGFD 199
Query: 83 YLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKV 142
YLRDN+ + Q V R ++AIVDEVDS+LIDE R PL+ISG+A ++ Y A++
Sbjct: 200 YLRDNMVLDLSQKVQR---ELNYAIVDEVDSILIDEARTPLIISGQAEQNTEVYYRFARI 256
Query: 143 AELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDP----WARFVMNALKAK 198
A L +G YTV+LK+ +V LT+EGIA E L + DP ++ NALKAK
Sbjct: 257 ANQLQEGRDYTVDLKHRTVTLTDEGIARVERILNIPEDESLYDPRYFEATHYLDNALKAK 316
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y R+ Y V +G+ +I++E TGR+ RR+SEG+HQA+EAKEGL+++ +S +A IT
Sbjct: 317 ALYLRERDYTVIDGQVIIVDEFTGRLMYGRRYSEGLHQAIEAKEGLRVERESQTLATITI 376
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KL+GMTGTA TE +EF K++ M V+++PTN P IRVD P + + T R K+E
Sbjct: 377 QNYFRMYKKLAGMTGTAATEAEEFGKIYNMEVVQIPTNKPMIRVDHPDRIYKTERAKFEA 436
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+E++ ++ +GRPVLVG+TS+E SEYLS LLK++GIPH VLNA KY +EA VAQAG
Sbjct: 437 VVKEIKELYSIGRPVLVGTTSIEKSEYLSQLLKREGIPHQVLNA--KYHEKEAAIVAQAG 494
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEV 427
R A+TI+TNMAGRGTDIILGG + K+++ L T+E + E+
Sbjct: 495 RPGAVTIATNMAGRGTDIILGGTLDLYLKEVLAKHGLDPNTKEDIPEEI 543
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 167/347 (48%), Gaps = 72/347 (20%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV GGLH+IGT HE+RRIDNQLRGR+GRQGDPGS+RF VSL+DE+ ++F + +
Sbjct: 557 EVVAKGGLHIIGTERHEARRIDNQLRGRSGRQGDPGSSRFYVSLEDEIMRRFGLNRVAGI 616
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ DE MPIE + +Q+ Q AE Y F IRK +V++D+V+ QR+ VY +R
Sbjct: 617 --MDRLGVDESMPIENSLVTKQIEAAQAKAEGYNFDIRKHVVQYDDVMNKQRETVYSMRD 674
Query: 650 SILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
IL G N E + I ++ +V++ + P W+L LL+ A+A
Sbjct: 675 RILAGDNTRERVMEIIHNEIKRLVEDYTSD-----QEPDEWNLQGLLR---AVA------ 720
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
SI LPE D+ P +G+
Sbjct: 721 ------------SIFPLPE----DV----------VPESIQGL----------------- 737
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
T + +L ++ +Y QE D+ M+ +ER VL++ +D W D+L
Sbjct: 738 ---------TPQQIEDFLYELADEAYHKREQEVGEDN--MRFLERMVLLRAIDMIWVDYL 786
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+M L + +R+FG R+PL EYK + F + + S+
Sbjct: 787 TSMEELRQGIGLRAFGQRDPLVEYKTEAYSLFQNFIQTVEHEVANSI 833
>gi|54026572|ref|YP_120814.1| preprotein translocase subunit SecA [Nocardia farcinica IFM 10152]
gi|81679834|sp|Q5YQU1.1|SECA_NOCFA RecName: Full=Protein translocase subunit SecA
gi|54018080|dbj|BAD59450.1| putative preprotein translocase [Nocardia farcinica IFM 10152]
Length = 937
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/429 (49%), Positives = 289/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 82 KHYKVQVMGGAALHLGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I GM P +RR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 142 WMGRVHRFLGLEVGVILGGMTPPQRRVAYAADITYGTNNEFGFDYLRDNMAHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 202 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKKDVHYEVDIKK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE Y+RD YIVR+G+ +I+
Sbjct: 259 RTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYQRDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++IQ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRILVGRRYNEGMHQAIEAKEGVEIQPENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + V+ +PTN P IRVD + T K+ +V G+PVL+G+
Sbjct: 379 EAAELHQIYNLGVVPIPTNKPMIRVDQSDLIYKTEEAKFNAVVDDVAERHEKGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++GIPH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTDI+
Sbjct: 439 TSVERSEYLSKQFTRRGIPHSVLNA--KFHEQEAQIIAEAGRPGAVTVATNMAGRGTDIV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 68/365 (18%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
+L L+ + + + V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +
Sbjct: 526 AWLPTLEQVKAQTAADADAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYL 585
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL DE+ ++F+ A+ ++R+ +D+PIE + + + Q E+ F IRK+++
Sbjct: 586 SLGDELMRRFNGAALEAI--MTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVL 643
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---W 688
++DEV+ QR +Y R IL G E Q+ Q ++ ++I VD Y W
Sbjct: 644 KYDEVMNQQRTVIYGERNRILRG--EDMEGQV----QNMITDVITAYVDGATAEGYVEDW 697
Query: 689 SLDKLLKEFIAIAGKILD--DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
L+KL + LD +L + G+ S EEL E D ++ Y
Sbjct: 698 DLEKLWTALKTLYPVSLDYRELTGELDGEPRDLSREELREALLEDAHSAY---------- 747
Query: 747 FRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVY 806
KR I D L G R
Sbjct: 748 ----------AKREQEI--DGLAGEGSMR------------------------------- 764
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML
Sbjct: 765 --NLERQVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFTAMLDGL 822
Query: 867 RRLTV 871
+ +V
Sbjct: 823 KEESV 827
>gi|289577755|ref|YP_003476382.1| preprotein translocase subunit SecA [Thermoanaerobacter italicus
Ab9]
gi|289527468|gb|ADD01820.1| preprotein translocase, SecA subunit [Thermoanaerobacter italicus
Ab9]
Length = 897
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 287/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFKVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMGPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 200 RG---LNYAIVDEVDSILIDEARTPLIISGVGEKSTDMYKLADRFVRTLKKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGVVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K+ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFRAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HE+RRIDNQLRGRAGRQGDPG TRF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHEARRIDNQLRGRAGRQGDPGETRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDTLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + IF ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESIFDMIRSIIERNVEVYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MRELERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLVQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEETVKFL 834
>gi|296122615|ref|YP_003630393.1| preprotein translocase subunit SecA [Planctomyces limnophilus DSM
3776]
gi|296014955|gb|ADG68194.1| preprotein translocase, SecA subunit [Planctomyces limnophilus DSM
3776]
Length = 1200
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/429 (49%), Positives = 280/429 (65%), Gaps = 28/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT----------------------VVTVNDYLAQRDAE 38
MRH+DVQ++GG +LH G IAEM T V+TVNDYLA RD E
Sbjct: 111 MRHYDVQMVGGFILHKGMIAEMMTGEGKTLVATLPAFLNGLAGSVHVITVNDYLALRDME 170
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++ LGL+VG IQ M ER+ Y CDITY N+E GFDYLRDN+ + V
Sbjct: 171 WMAPLYTGLGLTVGAIQSNMREPERQKAYACDITYGTNNEFGFDYLRDNMKPRKDLQVQ- 229
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
K +AI+DE+D++LIDE R PL+ISG A DV +YP A ++ L + +H+ V+ K
Sbjct: 230 --KRRQYAIIDEIDNILIDEARTPLIISGPAHDDVTKYPKAHRIGLQLKRDIHFEVKEKE 287
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+EGI AE + N W + N+L+A Y+RDV YIV N + +II
Sbjct: 288 HTCHLTDEGIRYAEELAGVESFYTAGNMEWPHLIDNSLRAIHLYKRDVNYIVENDEIIII 347
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR E R+WS+G+HQAV+AKE ++I+ D+ A +T Q+ FKLYPKLSGMTGTA T
Sbjct: 348 DEHTGRKMEGRQWSDGLHQAVQAKENVRIKEDTQTFATVTLQNFFKLYPKLSGMTGTAMT 407
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++++ V+ VPTN P R++ P + T + KW+ +EV+ + GRPVLVG+
Sbjct: 408 EANEFWKIYKLDVVAVPTNRPTQRINYPDAIYRTVKEKWDAVIEEVKEVHATGRPVLVGT 467
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE+LS L QQG+ HN+LNA KY REAE +AQAGR A+TISTNMAGRGTDII
Sbjct: 468 VSIENSEHLSRKLTQQGVKHNMLNA--KYHEREAEIIAQAGRLGAVTISTNMAGRGTDII 525
Query: 398 LGGNPKMLA 406
LGGNP+ LA
Sbjct: 526 LGGNPEYLA 534
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 526 NEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDT 585
+EG +V LGGLHV+GT H+SRRID QLRGRAGRQGDPGS+RF +SL+D++ +KF +
Sbjct: 568 SEGKKVAELGGLHVVGTERHDSRRIDLQLRGRAGRQGDPGSSRFFLSLEDDLMRKFGGE- 626
Query: 586 SWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
W D ++ + E IE + ++ Q E+ +F RK L+E+DEV++ QRK VY
Sbjct: 627 -WVKDWLTAMGMQEGERIESGMVTSRIEAAQKKVEERHFESRKHLLEYDEVMDEQRKRVY 685
Query: 646 DLRQSILTGA 655
RQSIL GA
Sbjct: 686 GYRQSILDGA 695
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 717 LLKSIEELPELNSIDINNFYFPDLPKPPNL-FRGIRRKSSS-LKRWLAICSDDLTKNGRY 774
++++ E+PE +D N K P FR I +++ L +W N R+
Sbjct: 967 VIQTCGEVPEDRDLDPNKASAKTTAKTPKAPFRPISPEAAHRLAQW---------SNDRF 1017
Query: 775 RATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLS 834
+ D+ A + Q +R + ER ++++ LD W+DHL M+ L
Sbjct: 1018 GSELEADDFEDKDVTKARDYLIEQFTRRYRPELHTAERMLILECLDGAWKDHLYYMDHLR 1077
Query: 835 SAVNVRSFGHRNPLEEYKIDGCRFFISM 862
S + + + ++P EY+ +G R F M
Sbjct: 1078 SNIGLVGYAQKDPKVEYRREGMRAFEQM 1105
>gi|407982723|ref|ZP_11163390.1| preprotein translocase, SecA subunit, partial [Mycobacterium
hassiacum DSM 44199]
gi|407375705|gb|EKF24654.1| preprotein translocase, SecA subunit, partial [Mycobacterium
hassiacum DSM 44199]
Length = 884
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/436 (49%), Positives = 295/436 (67%), Gaps = 29/436 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GGA LH G++AEMKT VVTVNDYLA+RDAEWM
Sbjct: 80 FKVQLMGGAALHYGNVAEMKTGEGKTLTAVLPSYLNALSGKGVHVVTVNDYLAKRDAEWM 139
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
R+HRFLGL VG+I M P++RR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 140 GRIHRFLGLEVGVILAQMTPDQRRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQRG- 198
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
++AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+ +
Sbjct: 199 --HNYAIVDEVDSILIDEARTPLIISGPADSASHWYKEFARLAPLMQKDVHYEVDLRKRT 256
Query: 161 VELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ +TE G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI++E
Sbjct: 257 IGVTELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRDGEVLIVDE 316
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+TE
Sbjct: 317 FTGRVLVGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEA 376
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
E +++++ V+ +PTN P IR D P + T K+ ++ + G+PVLVG+TS
Sbjct: 377 AELHEIYKLGVVPIPTNKPMIRKDHPDLIYKTEEAKFLAVVDDIAERYEKGQPVLVGTTS 436
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SEYLS LL+++ IPHNVLNA KY +EA VA+AGR+ A+T++TNMAGRGTDI+LG
Sbjct: 437 VEKSEYLSRLLQKRRIPHNVLNA--KYHEQEAAIVAEAGRRGAVTVATNMAGRGTDIVLG 494
Query: 400 GNPKMLAKKIIEDRLL 415
GNP L K + ++ L
Sbjct: 495 GNPDFLTDKRLREQGL 510
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L + C E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 LLPQVKAECEREAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T A L++R+ +D+PIE + R + Q E+ F IRK ++++DE
Sbjct: 586 ELMRRFNGATLEA--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEIRKQVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
V+ QRK +Y R+ IL G E+ +Q ++ V+ + G + W L++L
Sbjct: 644 VMNQQRKVIYSERRRILEG--ENLREQALGMIRDVITAYVNGATAE-GYAEDWDLEQL 698
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGL 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|310659613|ref|YP_003937334.1| preprotein translocase subunit, ATPase [[Clostridium] sticklandii]
gi|308826391|emb|CBH22429.1| preprotein translocase subunit, ATPase [[Clostridium] sticklandii]
Length = 897
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 288/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 76 MRHYDVQLMGGMVLHQGRIAEMRTGEGKTLVATLPVYLNALSKEGVHVVTVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ P++RR+ Y DITY N+E GFDYLRDN+ Q+V
Sbjct: 136 EWMSKLYNFLGLTTGVILHGITPDQRRNAYNADITYGTNNEFGFDYLRDNMVIYKSQMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+L+DE R PL+ISG+ K A Y +A +L Y ++ K
Sbjct: 196 R---PLNYAIVDEVDSILVDEARTPLIISGQGDKSTALYTMADSFIRMLRNETDYIIDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
NSV L E G+ AE ++ D N + AL+A +RDV Y+V++G+ +I
Sbjct: 253 GNSVALNESGVEKAEKFFAVENITDIANMETYHHINQALRAHTMMKRDVDYVVKDGEIII 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGLK+Q +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 313 VDEFTGRLMFGRRYSEGLHQAIEAKEGLKVQRESKTLATITFQNYFRMYKKLSGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V+++PTN P +R D+ + T K+++A E+E + G+P+LVG
Sbjct: 373 TEEEEFKSIYRMDVVQIPTNKPVVRDDMDDVVYKTEAAKYKFAVDEIEERHKNGQPILVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LSD+LK++GI H VLNA K +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 433 TISIEDSEMLSDMLKKRGIRHEVLNA--KNHEKEAEIVAQAGRFEQVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ + K
Sbjct: 491 ILGGNPEFMTVK 502
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 69/343 (20%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V++ GGL +IGT HESRRIDNQLRGRAGRQGDPG++RF +SL+DE+ + F D A
Sbjct: 552 KVRQAGGLCIIGTERHESRRIDNQLRGRAGRQGDPGTSRFFISLEDELMRLFGSDRLMA- 610
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++ +I D+DMPIE + + + G Q E F IRK ++++D+V+ QR+ +Y R+
Sbjct: 611 -MVEKIGMDDDMPIEHKMLSKSIEGAQKKVEGKNFSIRKHVLQYDDVMNKQREIIYKERR 669
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLF 709
++L G E +I + +D+++ + +P W L L + F+
Sbjct: 670 NVLEG--EDVHSEILDMIDKTIDKVLSYYIPEGSYPESWDLKALEERFV----------- 716
Query: 710 AGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLT 769
N + PD K+ +DLT
Sbjct: 717 ------------------------NIFHPD------------------KKVEVGNVEDLT 734
Query: 770 KNGRYRATTN-LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLI 828
K+G N LR Y +V E R M+E+ER +L++ +D W DH+
Sbjct: 735 KDGLKEIIKNEALRLY------DEKEKLVGEER-----MRELERIILLQVVDSKWMDHID 783
Query: 829 NMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
M++L + +R+ G +P+ Y+I+G F M+ + + T+
Sbjct: 784 AMDQLRQGIGLRAIGQEDPVRAYQIEGFDMFDEMIQSIQEETL 826
>gi|345016984|ref|YP_004819337.1| protein translocase subunit secA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032327|gb|AEM78053.1| Protein translocase subunit secA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 897
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 288/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMGPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 200 R---ELNYAIVDEVDSILIDEARTPLIISGIGEKSTDMYKLADRFVRTLRKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGVVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HE+RRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHEARRIDNQLRGRAGRQGDPGESRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + I + ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESILEMVKSIIERNVEIYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|297544049|ref|YP_003676351.1| preprotein translocase subunit SecA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841824|gb|ADH60340.1| preprotein translocase, SecA subunit [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 897
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 287/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMGPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 200 RG---LNYAIVDEVDSILIDEARTPLIISGVGEKSTDMYKLADRFVRTLKKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKTVSLTEKGVVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K+ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFRAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSERLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HE+RRIDNQLRGRAGRQGDPG TRF +S
Sbjct: 539 YFELLEEAKKETEREHDEVVKLGGLYIIGTERHEARRIDNQLRGRAGRQGDPGETRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDTLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + IF ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESIFDMIRSIIERNVEVYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MRELERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLVQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEETVKFL 834
>gi|326389630|ref|ZP_08211196.1| preprotein translocase, SecA subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|325994345|gb|EGD52771.1| preprotein translocase, SecA subunit [Thermoanaerobacter
ethanolicus JW 200]
Length = 897
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 288/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M PEER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMGPEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 200 R---ELNYAIVDEVDSILIDEARTPLIISGIGEKSTDMYKLADRFVRTLRKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE +L D EN + + ALKA +RD+ Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGVVKAEKFFGIKNLADIENMEISHHINQALKAHAIMKRDIDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKPMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AKK
Sbjct: 495 LLGGNPEFIAKK 506
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L++ + E EV +LGGL++IGT HE+RRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 539 YFELLEEAKKETEKEHDEVVKLGGLYIIGTERHEARRIDNQLRGRAGRQGDPGESRFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + +++ + D+D PIE + +Q+ Q E F RK +++
Sbjct: 599 LEDDLMRLFG--SERVKNMMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDTRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ + I + ++++++ + K+P W +
Sbjct: 657 YDDVMNKQREIIYAQRRKVLEG--ENLKESILEMVKSIIERNVEIYTAGSKYPEEWDIKG 714
Query: 693 LL 694
LL
Sbjct: 715 LL 716
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIQSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|348176508|ref|ZP_08883402.1| preprotein translocase subunit SecA [Saccharopolyspora spinosa NRRL
18395]
Length = 965
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/438 (51%), Positives = 294/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVT NDYLA+RDAE
Sbjct: 79 RHFDVQLMGGASLHLGNIAEMKTGEGKTLTCVLPAYLNAITGKGVHVVTTNDYLARRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG I M PE+RR Y DITY N+E GFDYLRDN+A + V R
Sbjct: 139 WMGRVHRFLGLEVGAILADMTPEQRRKAYAADITYGTNNEFGFDYLRDNMAWSLADCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A + Y A++A +L + HY V+ +
Sbjct: 199 G---HNFAVVDEVDSILIDEARTPLIISGPADQSSRWYQEFARLAPMLKRDQHYEVDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE+G+ L E L +L++ N P ++ NALKAKE Y+RD YIVR+G+ LI+
Sbjct: 256 RTVGVTEDGVTLIEDQLGIENLYEAANTPLVGYLNNALKAKELYKRDKDYIVRDGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DEFTGRILAGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ V+ +PTN P R D P + T K+E +++E + G+PVLVG+
Sbjct: 376 EAAEFHTTYKLGVVPIPTNKPMARADQPDLVYKTEPAKFEAVAEDIEERHQAGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL Q+GIPHNVLNA K AREA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVERSEYLSKLLTQKGIPHNVLNA--KNHAREAAIIAEAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA + R L
Sbjct: 494 LGGNIDHLADAELRSRGL 511
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+V++ EG E++ +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 526 AVVEKITAQAKAEGEEIREVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 585
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++ F+ + +++R+ +D+PIE + R + Q E+ IRK+++++D
Sbjct: 586 DELMRR--FNAAMVETVMTRLKVPDDVPIEHKMVSRAIRSAQTQVEQQNMEIRKNVLKYD 643
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
EV+ QR +YD R +L G E +Q+ + VV
Sbjct: 644 EVMNQQRTVIYDERHRVLAG--EDLHEQVMHMLTDVV 678
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML A
Sbjct: 756 MRELERRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLIEYRREGFDMFGAMLEAL 815
Query: 867 RRLTVESLVQYWSSPMESQ 885
+ +V L E Q
Sbjct: 816 KEESVGFLFNVQVEAAEPQ 834
>gi|333921444|ref|YP_004495025.1| protein translocase subunit secA [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483665|gb|AEF42225.1| Protein translocase subunit secA [Amycolicicoccus subflavus
DQS3-9A1]
Length = 935
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/428 (48%), Positives = 290/428 (67%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAISGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG I GM P++RR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLEVGAILSGMTPQQRRDAYHADITYGTNNEFGFDYLRDNMAHSLSDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V++K
Sbjct: 198 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARLAPLMKKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L +L++ N P ++ NA+KAKE ++RD YIVR+G +I+
Sbjct: 255 RTIGVHEAGVEFVEDQLGIENLYEAANSPLVSYLNNAIKAKELFQRDKDYIVRDGDVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRILTGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + + R K+E ++ G+PVLVG+
Sbjct: 375 EAAELHQIYKLGVVPIPTNKPMIRADQQDLIYKSERAKFEAVADDIAERHAKGQPVLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS+ L+++ I HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSEQLRKRKIKHNVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKML 405
LGGNP+++
Sbjct: 493 LGGNPEII 500
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
+++ + EG +++ +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 527 IEESRAETAAEGDKIREVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 586
Query: 577 MFQKFSFDTSWAVDLI-SRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
+ ++F AV++I SR+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 587 LMRRFG-----AVEVIMSRLNLPDDVPIESKMVSRSIKSAQTQVEQQNFEVRKNVLKYDE 641
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
V+ QR +Y+ R IL G E+ QI + V+ + G
Sbjct: 642 VMNQQRTVIYEERNRILRG--ENLEGQISHMITDVITAYVNG 681
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML
Sbjct: 758 MRELERRVLLQALDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFAGMLEGL 817
Query: 867 RRLTV 871
+ V
Sbjct: 818 KEEVV 822
>gi|383825207|ref|ZP_09980358.1| preprotein translocase subunit SecA [Mycobacterium xenopi
RIVM700367]
gi|383335609|gb|EID14039.1| preprotein translocase subunit SecA [Mycobacterium xenopi
RIVM700367]
Length = 943
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F VQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 78 RPFHVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNAIGGKGVHIVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR+ Y DITY N+E GFDYLRDN+A + E+ V R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMSPDERRAAYAADITYGTNNEFGFDYLRDNMAHSLEECVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HHYAIVDEVDSILIDEARTPLIISGPAEGGTNWYTEFARIAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYEKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVSIPTNKPMIRTDQSDLIYKTEEAKYLAVVDDVAERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++GIPHNVLNA KY +EA +A+AGR+ A+T++TNMAGRGTDI+
Sbjct: 435 TSVEKSEYLSRLLTKRGIPHNVLNA--KYHEQEAGIIAEAGRRGAVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L K + +R L
Sbjct: 493 LGGNVDFLTDKRLRERGL 510
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 59/338 (17%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HE+RRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F + + L++R
Sbjct: 545 GGLYVLGTERHEARRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRF--NGAALESLLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y+ R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYEERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
E+ +Q ++ VV + G + W LD K+ D
Sbjct: 663 --ENLKEQALSMVRDVVTAYVNGATAE-GYAEDWDLD-----------KLWD-------- 700
Query: 715 DTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRY 774
LK++ + ID + PD P +LT+
Sbjct: 701 --ALKTLYPV----GIDYRELFNPDAVGEPG---------------------ELTRE--- 730
Query: 775 RATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRL 833
LL L D A + E+ D M+E+ER+VL+ +D WR+HL M+ L
Sbjct: 731 ----ELLDALLKDAERAYAAREAEIEALAGDGAMRELERSVLLNVIDRKWREHLYEMDYL 786
Query: 834 SSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ R+PL EY+ +G F++ML + +V
Sbjct: 787 KEGIGLRAMAQRDPLVEYQREGYDMFVAMLDGLKEESV 824
>gi|117928966|ref|YP_873517.1| preprotein translocase subunit SecA [Acidothermus cellulolyticus
11B]
gi|166918835|sp|A0LVS1.1|SECA_ACIC1 RecName: Full=Protein translocase subunit SecA
gi|117649429|gb|ABK53531.1| protein translocase subunit secA [Acidothermus cellulolyticus 11B]
Length = 1009
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 298/443 (67%), Gaps = 35/443 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 81 RHFDVQIMGGAALHFGNIAEMKTGEGKTLVSTLPAYLNALAGRGVHVVTVNDYLARRDAE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGL VG+I M P ER+ Y DITY N+E GFDYLRDN+A + +++V R
Sbjct: 141 WMGRIHRFLGLEVGVISPQMGPAERKKAYAADITYGTNNEFGFDYLRDNMAWSVDEIVQR 200
Query: 99 WPKPFHF-AIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YT 153
HF AIVDEVDS+LIDE R PL+ISG + Y AK+AE L +G + Y
Sbjct: 201 G----HFYAIVDEVDSILIDEARTPLIISGPVDMNQKWYTDFAKLAERLQRGENGEGDYE 256
Query: 154 VELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNG 212
V+ K ++ +TE G+ E L ++L++ N P ++ NAL+AKE Y+RD Y+V +G
Sbjct: 257 VDEKKRTISITERGVQRVEDWLGIDNLYEPTNTPLVGYLHNALRAKELYKRDRDYVVIDG 316
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ LI++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY KL+GMT
Sbjct: 317 EVLIVDEFTGRILYGRRYNEGMHQAIEAKEGVPIKQENQTLATITLQNYFRLYEKLAGMT 376
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA TE EF +++++ V+ +PTN P IR+D P F T + K+ +++ G+P
Sbjct: 377 GTAMTEANEFHQIYKLGVVPIPTNRPMIRIDQPDVVFKTEKAKFAAVVEDIAQRHAKGQP 436
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TSVE SE LS +L ++GIPH VLNA KY +EA VAQAGRK A+T++TNMAGR
Sbjct: 437 VLVGTTSVEKSELLSGMLLRRGIPHAVLNA--KYHEKEAAIVAQAGRKGAVTVATNMAGR 494
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGNP+ LA++ + +R L
Sbjct: 495 GTDIMLGGNPEFLARQELAERGL 517
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 123/226 (54%), Gaps = 13/226 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL+ + + E EV +LGGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SL+D
Sbjct: 533 VLEKWKKAVAAEHDEVVQLGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLED 592
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ ++ + ED+P+E + R + Q E+ F IRK+++++DE
Sbjct: 593 DLMR--LFNGPMVQRIMETLNYPEDVPLESKMVTRAIRSAQTQVEQQNFEIRKNVLKYDE 650
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QR +Y R+ +L G + + + + ++D++I V Y W L++
Sbjct: 651 VLNKQRAVIYAERRRVLHGDD------LHEQVGHMIDDVIRDYVRAATEEGYAEDWDLEQ 704
Query: 693 LLKEFIAI--AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
L ++ G +D + A GD + E L E + D + Y
Sbjct: 705 LWTALRSLYPVGLTIDQVVAECGGDRSGLTAEFLIERLTEDAHRAY 750
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER V++ LD WR+HL M+ L + +RS+G R+PL EY+ +G F +ML
Sbjct: 767 IRELERRVVLAVLDRKWREHLYEMDYLQEGIQLRSYGQRDPLVEYQREGYTMFQTMLDGI 826
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 827 KEESVRLL 834
>gi|39997148|ref|NP_953099.1| preprotein translocase subunit SecA [Geobacter sulfurreducens PCA]
gi|409912573|ref|YP_006891038.1| Preprotein translocase subunit SecA [Geobacter sulfurreducens
KN400]
gi|81702019|sp|Q74BJ1.1|SECA_GEOSL RecName: Full=Protein translocase subunit SecA
gi|39984038|gb|AAR35426.1| preprotein translocase, SecA subunit [Geobacter sulfurreducens PCA]
gi|298506161|gb|ADI84884.1| preprotein translocase, SecA subunit [Geobacter sulfurreducens
KN400]
Length = 897
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/450 (48%), Positives = 292/450 (64%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHQGKIAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGL+VG+I G+ +ERR+ Y DITY N+E GFDYLRDN+ E V
Sbjct: 141 EWMGRLYRFLGLTVGVIVHGIDDDERRAAYAADITYGTNNEFGFDYLRDNMKFALEDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R PF F+IVDEVDS+LIDE R PL+ISG +Y + ++ L +G
Sbjct: 201 R---PFFFSIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPHLKKGEVKEVEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAK 198
+TV+ K S LTEEG+A E L+ ++L+D V AL+A
Sbjct: 258 TLSGKRKVYTGDFTVDEKARSSSLTEEGVAKVEKLLKIDNLYDPRHMEILHHVNQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
+RRDV Y+V++G+ +I++E TGR+ RRWS+G+HQA+EAKEG++I+ ++ +A IT+
Sbjct: 318 ALFRRDVDYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGVEIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE +EF K++++ V +PTN P +R D P + T R K+
Sbjct: 378 QNYFRMYEKLSGMTGTADTEAEEFHKIYKLEVTVIPTNRPLLRPDFPDVIYKTEREKFNA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+E++ G+P LVG+ S+E SE L+++L++QGIPHNVLNA K REAE VAQAG
Sbjct: 438 VIEEIKGCHEKGQPTLVGTISIEKSEVLAEILRKQGIPHNVLNA--KQHEREAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
RK +TI+TNMAGRGTDI+LGGNP+ LAK+
Sbjct: 496 RKGMVTIATNMAGRGTDILLGGNPEGLAKQ 525
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y VL + C+ E EV LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 538 YEKVLAEYRTLCAREHDEVVALGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLS 597
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + ++ + +E I I + + Q E + F IRK L+E
Sbjct: 598 LEDDLLRIFG--SERVSKIMDFLKIEEGEAITHGMITKAIENAQKKVEAHNFEIRKHLIE 655
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
+D+V+ QR+ +Y R+ IL G + + Q M ++EI
Sbjct: 656 YDDVMNKQREVIYTQRREILAG--QDIRRHFTQMMDDTIEEI 695
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 802 YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFIS 861
+ D M + + ++++T+D W+DHL++++ L + +R +G ++P +EYK + + F+
Sbjct: 759 FGDELMDHLIKVIMLQTIDAQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKKEAYQLFMD 818
Query: 862 MLSATRRLTVESLVQYW 878
M++ TVE + +W
Sbjct: 819 MMARIAAETVEKI--FW 833
>gi|347754488|ref|YP_004862052.1| protein translocase subunit secA [Candidatus Chloracidobacterium
thermophilum B]
gi|347587006|gb|AEP11536.1| protein translocase subunit secA [Candidatus Chloracidobacterium
thermophilum B]
Length = 930
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/429 (50%), Positives = 282/429 (65%), Gaps = 29/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEM+T VVTVNDYLA+RDA
Sbjct: 82 MRHFDVQLIGGIALHHGRIAEMRTGEGKTLVATLPVYLNALTGRGVHVVTVNDYLAKRDA 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGLSVG+IQ + +ERR+ Y CDITY N+E GFDYLRDN+ + + V
Sbjct: 142 EWMGKIYRFLGLSVGVIQNHLYDDERRAAYACDITYGTNNEFGFDYLRDNMKYSVKSCVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+I+G + + +Y +A V L Y V+ K
Sbjct: 202 RG---HYFAIVDEVDSILIDEARTPLIIAGPSDESSEKYYLANDVIPKLNPATDYLVDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LTE GI E L +L+D N V ALKA Y RD +Y+VR+G+ +I
Sbjct: 259 THTAALTESGIERVEKLLGVENLYDPANFELLHCVNQALKAHTLYHRDKEYMVRDGQVII 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR + RRWS+G+HQAVEAKEG+KI+A++ +A IT Q+ F++Y KL+GMTGTA+
Sbjct: 319 VDEHTGRPMDGRRWSDGLHQAVEAKEGVKIEAETQTLATITLQNYFRMYEKLAGMTGTAE 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V +PT+ P IR D P + TA KW +E++ + G+P+LVG
Sbjct: 379 TEAAEFAKIYNLEVTVIPTHRPMIRQDYPDLIYRTAEEKWNAIVEEIKERHQTGQPILVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SV NSE +S L GIPHNVLNA KY REAE VAQAGRK +TI+TNMAGRGTDI
Sbjct: 439 TASVANSELVSRKLSAIGIPHNVLNA--KYHEREAEIVAQAGRKGMVTIATNMAGRGTDI 496
Query: 397 ILGGNPKML 405
+LGGNP+ L
Sbjct: 497 LLGGNPEFL 505
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 166/354 (46%), Gaps = 79/354 (22%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++ + + E +EV LGGLH+IG+ HESRRIDNQLRGRAGRQGDPGS+RF +SL+
Sbjct: 527 ALFEQIKAQTDREHAEVVALGGLHIIGSERHESRRIDNQLRGRAGRQGDPGSSRFYLSLE 586
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F + + L + +E + IE + R++ Q S E + F IRK L+E+D
Sbjct: 587 DDLMRIFGGERLKNIMLT--LGMEEGVAIESRMVSRRVEAAQKSVEAHNFSIRKHLLEYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ +QR+ +Y+LR+ ++ GA
Sbjct: 645 DVMNLQRETIYNLRRELMEGAEGG------------------------------------ 668
Query: 695 KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSID-----INNFYFPDLPKPPNLFRG 749
++FI +A +DL A D + + + PE +D + + Y D F
Sbjct: 669 RQFIHLA----EDLLA----DVIRRYLHGRPEEWDVDGLRVALLDLYAYDCEAEKLDFEH 720
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
+ R+ K W + RYRA +E++ +++
Sbjct: 721 LNREEIRAKVWQTVLE-------RYRA---------------------REAKIGAENLRQ 752
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+ER V++ +D W+ HL ++ L V +R +G ++PL EYK + R F M+
Sbjct: 753 LERHVMLNIVDAHWKKHLATLDHLKEGVGLRGYGQKDPLIEYKKESSRLFEEMI 806
>gi|443289006|ref|ZP_21028100.1| Protein translocase subunit secA [Micromonospora lupini str. Lupac
08]
gi|385887684|emb|CCH16174.1| Protein translocase subunit secA [Micromonospora lupini str. Lupac
08]
Length = 959
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/448 (48%), Positives = 296/448 (66%), Gaps = 33/448 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+IAEMKT VVTVNDYLAQRDA
Sbjct: 66 RPYDVQVMGGAALHFGNIAEMKTGEGKTLTSVMAVYLNALSGDGVHVVTVNDYLAQRDAA 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH FLGL+VG++ E ++ Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 126 WMGRVHEFLGLTVGVVLPNRPATEHKAAYECDITYGTNNEFGFDYLRDNMAWSKDELVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FA+VDEVDS+LIDE R PL+ISG A Y A V L G Y V
Sbjct: 186 G---HNFAVVDEVDSILIDEARTPLIISGPAEHSARWYGEFAGVVARLQPGTDGEGDYEV 242
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ ++ +TE G+A E L ++L++ N P ++ NA+KAKE Y+RD YIV +G+
Sbjct: 243 DHSKRTIAVTERGVAKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELYKRDKDYIVSDGE 302
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTG
Sbjct: 303 VLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKQENQTLATITLQNYFRLYNKLSGMTG 362
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF K++++ V+ +PT+ P +R D P + T + K+ +++ ++G+PV
Sbjct: 363 TAQTEASEFNKVYKVGVVSIPTHRPMVREDRPDVIYKTEKAKFNAVIEDIAERHQMGQPV 422
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVENSE LS LL+++GIPHNVLNA K+ AREAE VAQAGRK A+T++TNMAGRG
Sbjct: 423 LVGTVSVENSEILSQLLRRRGIPHNVLNA--KFHAREAEIVAQAGRKGAVTVATNMAGRG 480
Query: 394 TDIILGGNPKMLAKKIIEDRLLLLLTRE 421
TDI+LGGNP+ LA + R L L E
Sbjct: 481 TDILLGGNPEFLAANELRQRGLDPLENE 508
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 119/218 (54%), Gaps = 16/218 (7%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E EV GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SLQD
Sbjct: 518 VLPTWKQACDAEADEVSTAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLQD 577
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F AV + R ED+PIE + RQ+ Q E IRK+++++DE
Sbjct: 578 ELMRRFRAGAVEAV--MERFNIPEDVPIESKMVTRQIKSAQAQIEGQNAEIRKNVLKYDE 635
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL-- 693
VL QR+ VY R +L G E S Q+ + V+ + G + W L++L
Sbjct: 636 VLNKQRQVVYAERLRVLNG--EDLSDQVRNMIDDTVEAYVRGATSD-GYGEDWDLEQLWS 692
Query: 694 -LKEFIAIAGKILDDL-------FAGISGDTLLKSIEE 723
LK+ + G +++L AG+ D L+ ++E
Sbjct: 693 SLKQLYPV-GVTIEELEEEAGGSRAGMDADFLVARLKE 729
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++ER VL++ +D WR+HL M+ L +N+R++ R+P+ EY+ +G F +M+
Sbjct: 747 VRQLERMVLLQVIDRKWREHLYEMDYLQEGINLRAYAQRDPVVEYQREGFDMFATMMEGI 806
Query: 867 RRLTV 871
+ TV
Sbjct: 807 KEETV 811
>gi|319948920|ref|ZP_08023028.1| preprotein translocase subunit SecA [Dietzia cinnamea P4]
gi|319437417|gb|EFV92429.1| preprotein translocase subunit SecA [Dietzia cinnamea P4]
Length = 925
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 295/440 (67%), Gaps = 29/440 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQIIG VLH GS+AEMKT VVTVNDYLA+RDAEWM
Sbjct: 82 YKVQIIGAIVLHTGSVAEMKTGEGKTLTCVLPAYLNALSDKGVHVVTVNDYLAKRDAEWM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
RVHRFLGLSVG I GM P++RR Y DITY N+E GFDYLRDN+A ++ QLV R
Sbjct: 142 GRVHRFLGLSVGAILSGMTPDQRREAYHADITYGTNNEFGFDYLRDNMAHDTAQLVQRG- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
++AIVDEVDS+LIDE R PL+ISG A Y A++A LL +G HY V+ K +
Sbjct: 201 --HNYAIVDEVDSILIDEARTPLIISGPADGSSKWYAEFARIAPLLEEGTHYEVDRKKRT 258
Query: 161 VELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ +TE+G+ E L ++L++ N P ++ N++KAKE + +D YIVR+G +I++E
Sbjct: 259 IGVTEQGVEFVEDQLGIDNLYEAANSPLVSYLNNSIKAKELFIKDKDYIVRDGDVIIVDE 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGRV + RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+TE
Sbjct: 319 FTGRVLDGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYEKLAGMTGTAETEA 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
E +++++ V+ +PTN P R D P + T K+ +++ +PVLVG+ S
Sbjct: 379 AELYQIYKLEVMPIPTNRPMARADQPDLIYKTEEAKFAAVVEDIAERVEKKQPVLVGTAS 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE+LS LL ++GI H+VLNA K+ A+EA+ +AQAGR A+T++TNMAGRGTDI+LG
Sbjct: 439 VERSEHLSRLLTRKGIKHHVLNA--KFHAQEAQIIAQAGRPGAVTVATNMAGRGTDIVLG 496
Query: 400 GNPKMLAKKIIEDRLLLLLT 419
GNP ++A + +R L +T
Sbjct: 497 GNPDIIADLNLRERGLDPVT 516
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 5/203 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E V+ GGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 536 TKEEAERVREAGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ ++R++ +D+PIE + R + Q E F IRK ++++DEV+ QR
Sbjct: 596 AAVEAI--MNRLSLPDDVPIEAGMVSRAVKNAQTQVESQNFEIRKDVLKYDEVMNQQRTV 653
Query: 644 VYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIF-GNVDPLKHPRYWSLDKLLKEFIAI 700
+Y R+ IL G + + I+Q + A VD G V+ + W + L
Sbjct: 654 IYRERKRILEGEDITDQVESMIYQVVSAYVDGATAEGYVEDWDLEKLWDALRQLYPVSIT 713
Query: 701 AGKILDDLFAGISGDTLLKSIEE 723
A +I+D G GD K++++
Sbjct: 714 AQEIIDGDEYGSPGDLSAKNLKD 736
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER+V+++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +M+
Sbjct: 762 MRQLERSVMLQVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFSAMMDGV 821
Query: 867 RRLTVESL 874
R TV L
Sbjct: 822 REETVAFL 829
>gi|269128232|ref|YP_003301602.1| preprotein translocase subunit SecA [Thermomonospora curvata DSM
43183]
gi|268313190|gb|ACY99564.1| preprotein translocase, SecA subunit [Thermomonospora curvata DSM
43183]
Length = 954
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/445 (49%), Positives = 293/445 (65%), Gaps = 36/445 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT +VTVNDYLA+RDAE
Sbjct: 81 RHFDVQVMGGAALHLGNIAEMKTGEGKTLTAVLPAYLNALTGKGVHIVTVNDYLAKRDAE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH+FLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + E+ V R
Sbjct: 141 WMGRVHQFLGLEVGVILPQMTPDERRKAYNADITYGTNNEFGFDYLRDNMAWSLEECVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------- 151
H+AIVDEVDS+LIDE R PL+ISG A ++ Y AK+ L +
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPAEQNTKWYVEFAKIVPKLKRASDKDATDGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVR 210
Y V+ K +V + E G+ E L ++L+D N P F+ NALKAKE Y+RD Y+V
Sbjct: 258 YQVDEKKRTVGILESGVEKVEDWLGIDNLYDPANTPLVSFLNNALKAKELYKRDRDYVVM 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
NG+ LI++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY KL+G
Sbjct: 318 NGEVLIVDEFTGRILHGRRYNEGMHQAIEAKEGVPIKDENQTLATITLQNYFRLYEKLAG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA+TE EF K++++ V+ +PTN P IR D P + T + K+E ++ G
Sbjct: 378 MTGTAQTEAAEFNKIYKLGVVPIPTNKPMIRKDQPDVVYKTEQAKFEAVVDDIAERHAKG 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+TSVE SE LS +LK++GIPH VLNA K+ +E+ VA+AGR A+T++TNMA
Sbjct: 438 QPVLVGTTSVEKSERLSKMLKRRGIPHEVLNA--KHHEKESAIVAEAGRLGAVTVATNMA 495
Query: 391 GRGTDIILGGNPKMLAKKIIEDRLL 415
GRGTDI+LGGNP +A + + +R L
Sbjct: 496 GRGTDIMLGGNPDFIADRQLHERGL 520
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 13/226 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D
Sbjct: 536 ALEKAKEAVKGEYEKVVEAGGLYVVGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLED 595
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ A+ ++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 596 DLMRLFNSVRVEAI--MNRLNIPDDVPIESKIVTKAIQSAQTQIEQQNFEIRKNVLKYDE 653
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QR+ +Y R+ +L GA+ + + ++ ++DE+I G V + W LDK
Sbjct: 654 VLNRQRQVIYAERRKVLEGAD------LHEQVRRMIDEVIDGYVAGATSEGFAEDWDLDK 707
Query: 693 LLKEFIAI--AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
L K F + +DD+ + GD E L E D Y
Sbjct: 708 LWKAFKQLYPISVTIDDVVEEVGGDISALDAETLAERIRKDAQEAY 753
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML
Sbjct: 765 MRELERRVILSVLDRKWREHLYEMDYLQEGIGLRAMAQRDPLVEYQREGYDMFNAMLDGI 824
Query: 867 RRLTV 871
+ +V
Sbjct: 825 KEESV 829
>gi|323140698|ref|ZP_08075619.1| preprotein translocase, SecA subunit [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414822|gb|EFY05620.1| preprotein translocase, SecA subunit [Phascolarctobacterium
succinatutens YIT 12067]
Length = 819
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 290/436 (66%), Gaps = 31/436 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RD+
Sbjct: 84 MRHFDVQLIGGVVLHRGKIAEMRTGEGKTLVATAPVYLNALTGKGVHVVTVNDYLARRDS 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R+++FLGLSVGLI M +R++ Y DITY N+E GFDYLRDN+ + Q+V
Sbjct: 144 EDMGRIYKFLGLSVGLIVHDMDFPDRKAAYAADITYGTNNEFGFDYLRDNMVVDENQMVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++ IVDEVDS+LIDE R PL+ISG K Y V A+V + +G YTV+ K
Sbjct: 204 R---ELNYCIVDEVDSILIDEARTPLIISGPGEKSTELYQVLARVVANMEEGEDYTVDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND--PWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
V TE+GIA AE L +L+D ++ +M ALKAK RD Y+V++G+ +
Sbjct: 261 QKQVAPTEKGIAKAEKMLGIGNLYDNEHGVDYSHQIMCALKAKALMHRDRDYVVKDGQVI 320
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 321 IVDEFTGRLMFGRRFSEGLHQAIEAKEGVKVERESQTLATITFQNYFRMYKKLAGMTGTA 380
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KTEE+EF K++ +PV+ VPTN P IR+D P + T K++ A E+E + GRPVLV
Sbjct: 381 KTEEQEFQKIYNLPVVVVPTNKPMIRIDYPDVIYKTRIAKYKAAVNEIEECHKSGRPVLV 440
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ SE LS +LK++ IPHNVLNA KY +EAE ++ AG+ A+TI+TNMAGRGTD
Sbjct: 441 GTTSIAQSEELSAMLKRRNIPHNVLNA--KYHEKEAEIISHAGQYGAVTIATNMAGRGTD 498
Query: 396 IILG-GNPKMLAKKII 410
I LG G P++ II
Sbjct: 499 ITLGEGVPELGGLHII 514
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 71/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR RQGDPGS++F +SL+D++ + F D
Sbjct: 502 GEGVPELGGLHIIGTERHESRRIDNQLRGRCARQGDPGSSKFFLSLEDDLMRLFGSDNIA 561
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ ++D PIE + + + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 562 GI--MDKLGMEDDEPIEHSLVTKSIENAQKKVEARNFSIRKHVLEYDDVMNQQREVIYSQ 619
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R IL N + ++ +VDE + + P +S D L+ I A
Sbjct: 620 RHKILHQEN------LKDTIKEMVDETVERTMTMYAPPEVYSEDWDLQALINYA------ 667
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+FY P + + + R+ L +L +DD
Sbjct: 668 -------------------------EDFYAPRGLLTVDYLQNLSRE--ELAEYLQKVADD 700
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
Y+A + +G L+ N+V D+ +M +HL
Sbjct: 701 -----NYQAREDA----IGPELMRELENLVMLKVVDNHWM-----------------EHL 734
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
M+ L V +R++G ++PL EYK + F +M+ A + E +V+Y
Sbjct: 735 DAMDMLREGVGLRAYGQKDPLVEYKFEAYDMFEAMMEAIK----EDVVRY 780
>gi|359425179|ref|ZP_09216280.1| protein translocase subunit SecA [Gordonia amarae NBRC 15530]
gi|358239543|dbj|GAB05862.1| protein translocase subunit SecA [Gordonia amarae NBRC 15530]
Length = 939
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/471 (46%), Positives = 304/471 (64%), Gaps = 38/471 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P+ RR Y DITY N+E GFDYLRDN+A ++LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMNPDARREAYHADITYGTNNEFGFDYLRDNMAHTLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+L+DE R PL+ISG Y A++A LL + +HY V++K
Sbjct: 198 G---HNFAIVDEVDSILVDEARTPLIISGPTDSSSKWYAEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ +I+
Sbjct: 255 KTVGVHEQGVEFVEDQLGIDNLYEAANSPLVGYLNNAIKVKELFHRDKDYIVRNGEVVIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEKVEIKAENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ LG+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQTDLIYKTEEAKFAAVVDDITERHELGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L+++GIPH+VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLEKRGIPHSVLNA--KFHEQEAQIVAEAGRIGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLAKKIIEDRLLLLLTR---------EALNVEVDDKTSSPKVLSE 439
LGGNP ++A + L +T EA+ + DD T K + E
Sbjct: 493 LGGNPDIIADMRLRKAGLDPVTTPEEYEAAWDEAITIARDDATEQAKAVRE 543
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 175/352 (49%), Gaps = 73/352 (20%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ + V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 ATEQAKAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFN- 592
Query: 584 DTSWAVDLI-SRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
A+++I +R+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 593 --GAALEVIMNRVNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRK 650
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIA 699
+Y R++IL G + + +Q ++D+++ VD Y W +
Sbjct: 651 VIYGERRTILEGEDHADE------VQRMIDDVVTAYVDGATAEGYAEDWDV--------- 695
Query: 700 IAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKR 759
D L +++ L L+ +D + + D+ G R
Sbjct: 696 ---------------DELWRAMRTLYPLD-LDPDAIFHTDID-------GAR-------- 724
Query: 760 WLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVY----MKEVERAVL 815
DD++ + LR+ L D +Y +E D + M+++ER++L
Sbjct: 725 ------DDVSPDE--------LREVLLDDAHKAY--TAREEEIDQIAGEGAMRQLERSIL 768
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +D WRDHL M+ L +++RS R+P+ EY+ +G F ML +
Sbjct: 769 LNVIDRKWRDHLYEMDYLREGIHLRSMAQRDPVAEYQREGFDMFTGMLEGIK 820
>gi|284992656|ref|YP_003411210.1| preprotein translocase subunit SecA [Geodermatophilus obscurus DSM
43160]
gi|284065901|gb|ADB76839.1| preprotein translocase, SecA subunit [Geodermatophilus obscurus DSM
43160]
Length = 1075
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/440 (50%), Positives = 285/440 (64%), Gaps = 31/440 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQ++GGA LH G+IAEM+T VVTVNDYLA+RDAE
Sbjct: 78 RHFRVQVMGGAALHLGNIAEMRTGEGKTLTGVLPAYLNALTDQGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLSVG+I G P +RR Y CDITY N+E GFDYLRDN+A N LV R
Sbjct: 138 WMGRVHRFLGLSVGVILSGERPAQRREQYACDITYGTNNEFGFDYLRDNMAWNKSDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR--YPVAAKVAELLVQGLHYTVEL 156
HFA+VDEVDS+LIDE R PL+ISG A Y A++A ++ + +HY VE
Sbjct: 198 G---HHFAVVDEVDSILIDEARTPLIISGPAGDPAMHRWYTEFARLAPMMQRDVHYEVEE 254
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V +TEEG+ E + +L++ N P F+ NALKAKE Y RD QYIV NG+ L
Sbjct: 255 GKRTVAITEEGVEFVEDQIGIENLYEAANTPLISFLNNALKAKELYHRDQQYIVSNGEVL 314
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGRV RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 315 IVDEFTGRVLSGRRYNEGMHQAIEAKERVQIKDENQTLATITLQNYFRLYEKLSGMTGTA 374
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE E + + + V+ +PTN P +R D + T + K++ ++ G+PVLV
Sbjct: 375 QTEAAELSQTYGLGVVPIPTNRPMVREDRSDVIYKTEQAKFDAVIDDIAERHEAGQPVLV 434
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ SVE SE LS LL Q+GI H VLNA K AREA VAQAGR A+T++TNMAGRGTD
Sbjct: 435 GTASVEKSELLSRLLLQRGIKHEVLNA--KNHAREAHIVAQAGRLGAVTVATNMAGRGTD 492
Query: 396 IILGGNPKMLAKKIIEDRLL 415
I LGG+P +A + + R L
Sbjct: 493 IQLGGSPDFIADEALRARGL 512
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L+ E EV +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 SALEKARDQVKAEHEEVTAVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 586
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ ++F+ ++ R+ +D+ PIE + R +L Q E+ F +RK ++++D
Sbjct: 587 DDLMRRFNGPMLESMMTTLRVPDDQ--PIESKMVSRAILSAQTQVEQQNFEVRKDVLKYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLD 691
EVL QR +Y R+ +L G Q + ++++VDE++ VD Y W L+
Sbjct: 645 EVLNRQRTVIYAERRKVLDG------QDLHVQVRSMVDEVVSAYVDGATEMGYAEDWDLE 698
Query: 692 KL 693
+L
Sbjct: 699 QL 700
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +++R+ +R+P+ EY+ +G F+SML
Sbjct: 758 MRELERRVLLSVLDRKWREHLYEMDYLRAGIHLRAMANRDPVVEYQREGYDMFVSMLDGI 817
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ +V L E Q+
Sbjct: 818 KEESVGFLFNLEVKTKEQQD 837
>gi|253575893|ref|ZP_04853227.1| preprotein translocase, SecA subunit [Paenibacillus sp. oral taxon
786 str. D14]
gi|251844687|gb|EES72701.1| preprotein translocase, SecA subunit [Paenibacillus sp. oral taxon
786 str. D14]
Length = 835
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 289/423 (68%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 80 MRHFDVQLVGGMALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLG++VG+ GM E+++ Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 QQMGQIYNFLGMTVGVNLNGMEHEQKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++ I+DEVDS+LIDE R PL+ISG+A K Y A + + L YTV++K
Sbjct: 200 R---PLYYCIIDEVDSILIDEARTPLIISGQAQKSTELYYAADRFVKTLTPEEDYTVDIK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+A AE A ++L+D V+ ALKA RRDV Y+V + + LI
Sbjct: 257 VKAVSLTEKGVAKAERAFGIDNLYDHKHVTLNHHVVQALKANVIMRRDVDYVVTDDEVLI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ + RR+S+G+HQA+EAKEG+++Q +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRIMQGRRYSDGLHQAIEAKEGIEVQNESMTLATITFQNYFRMYRKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V++VPTN PN R+DLP + + GK++ +E+ + +PVLVG
Sbjct: 377 TEEEEFKKIYGLEVLQVPTNRPNRRIDLPDVVYKSVDGKFKAVVEEIVQRHKKKQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE +S++LK++GIPH VLNA KY A EAE ++ AG ++TI+TNMAGRGTDI
Sbjct: 437 TISIENSERVSEMLKRKGIPHKVLNA--KYHAEEAEIISHAGEPGSVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 LLG 497
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 170/338 (50%), Gaps = 68/338 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLNMMERLGFEEDQPIESKMITRAIESAQKRVEGNNFDVRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L +E+ Q + ++ V++ ++ +
Sbjct: 615 RRELL--ESENIKQIVLDMIKPVIERVVEAH----------------------------- 643
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+ +ELPE N+ ++ N S L AI DD
Sbjct: 644 ------------TADELPE-------NWELQEVADYVN---------SKLLDEGAITKDD 675
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L + N + +Y+ + ++ Y N +E+ ++ ++E E+ + ++ +D W DH+
Sbjct: 676 L-----WGKEPNEMVEYIFERVLTKY-NAREEAIGPEM-VREFEKVIALRAVDSKWMDHI 728
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++L +++R++G +PL EY+ +G F +M+++
Sbjct: 729 DAMDQLRQGIHLRAYGGTDPLREYQFEGYEMFNAMIAS 766
>gi|262203501|ref|YP_003274709.1| preprotein translocase subunit SecA [Gordonia bronchialis DSM
43247]
gi|262086848|gb|ACY22816.1| preprotein translocase, SecA subunit [Gordonia bronchialis DSM
43247]
Length = 950
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 291/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALAGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR +Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSPDQRRVSYAADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+L+DE R PL+ISG A Y A++A LL + HY V++K
Sbjct: 198 G---HNFAIVDEVDSILVDEARTPLIISGPAEGSSKWYVEFARIAPLLERDEHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ + G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQTDLIYKTEEAKFAAVVDDISERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L+++ IPHNVLNA K+ +EA+ +A+AGR AIT++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLRKRDIPHNVLNA--KFHEQEAQIIAEAGRTGAITVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 103/164 (62%), Gaps = 11/164 (6%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ + +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGAALETIMNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 VNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKIIYRERREILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLK 695
E +Q+ Q ++D+++ VD Y W LD+L K
Sbjct: 663 --EDHHEQVKQ----MIDDVVGAYVDGATAEGYSEDWDLDELWK 700
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER+VL+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 760 MRQLERSVLLGVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFTGMLEGL 819
Query: 867 RRLTVESL--VQYWSSPMESQEL 887
+ T+ L Q + P E L
Sbjct: 820 KEETLSILFNAQVQTQPAEQPPL 842
>gi|379008497|ref|YP_005257948.1| protein translocase subunit secA [Sulfobacillus acidophilus DSM
10332]
gi|361054759|gb|AEW06276.1| Protein translocase subunit secA [Sulfobacillus acidophilus DSM
10332]
Length = 846
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/423 (49%), Positives = 288/423 (68%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL+DG IAEMKT VVTVNDYLA+RDA
Sbjct: 80 MRHFDVQLIGGMVLNDGRIAEMKTGEGKTLVATLAAYLNALPGQGVHVVTVNDYLARRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGL VGLIQ M ER++ Y DITY N+E GFDYLRDN+ + +V
Sbjct: 140 KWMGQLYEFLGLKVGLIQHDMEAPERKAAYAADITYGTNNEFGFDYLRDNMVLTLDDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG+ + Y A++ L +G YTV+ K
Sbjct: 200 RG---LHYAIVDEVDSILIDEARTPLIISGQGERSTELYYTFARIVRNLKEGRDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE G+A E L ++L+D+ +A ++ AL+A+ +RD Y+V++G+ +I
Sbjct: 257 MKAVAPTEAGVAKVERMLGVSNLYDDAHLDYAHYLNQALRAQALMKRDRDYVVKDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KIQ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIQEETQTLATITFQNYFRMYQKLAGMTGTAI 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + VI VPTN P IR D P + T K+ +E+E ++R RPVLVG
Sbjct: 377 TEEEEFRKIYGLDVIVVPTNKPMIRKDYPDVVYKTEAAKFRAVVREIEELYRQRRPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE+LS +LK++GIPHNVLNA KY +EAE +AQAG+ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIEKSEHLSQMLKERGIPHNVLNA--KYHEQEAEIIAQAGQPGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 169/354 (47%), Gaps = 67/354 (18%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D+ + F+ T
Sbjct: 497 GPGVAEMGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDFLRLFAAPTLS 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ DED PIE A+ R + Q E F RK ++++D+V+ +QR+ VY
Sbjct: 557 V--LMDRLGVDEDDPIESPALTRAIESAQKKVEARNFDARKHVLQYDDVMNLQREVVYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ILT S + ++ V+++ + + P H W L+
Sbjct: 615 RRDILT--QPSLRDDVLHMLKGVIEDAVDAHCPPNLHREEWDLE---------------- 656
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
L+KS+ E+ + P P + +G+ R D+
Sbjct: 657 --------ALVKSLAEV-----------FLPLDTVPLDEIQGMSR-------------DE 684
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L + LLR G+ L A +E M+E+ER ++++ +D W +HL
Sbjct: 685 LVET--------LLR--YGEELYAK-----KEEEIGPDNMRELERVIMLRVVDAKWVEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
M L V +R++G R+PL EYK + F +M+ A R + L +P
Sbjct: 730 DAMEALREGVGLRAYGQRDPLVEYKTEAYDMFQNMVGAIREEVIRMLFHVQMAP 783
>gi|441518762|ref|ZP_21000474.1| protein translocase subunit SecA [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454356|dbj|GAC58435.1| protein translocase subunit SecA [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 918
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 292/429 (68%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQ++GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQLMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A + ++LV R
Sbjct: 138 QMGRVHRFLGLQTAVILTGMTPDQRRVAYNADITYGTNNEFGFDYLRDNMAHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HNFAVVDEVDSILVDEARTPLIISGPADSSSKWYGEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N ++ NA+K KE + +D YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVTFVEDRLGIDNLYEPANSQLVGYLNNAIKVKELFHKDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +AQIT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRYNEGLHQAIEAKEGVEIKAENQTLAQITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ VI +PTN P IR D + T K++ ++ G+PVL+G+
Sbjct: 375 EAAEFQQIYKLGVIPIPTNKPMIRDDQSDLIYKTEEAKFDAVVDDIAESHEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++GI HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSQLLNRRGIKHNVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP+++A
Sbjct: 493 LGGNPEIIA 501
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLI-S 593
GGL+V+GT HESRRIDNQLRGR+GRQGDPG++RF +SL DE+ ++F+ + A+D I +
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLGDELMRRFN---AGALDAIMT 601
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
R+ ED+PIE + R + Q E+ F IRK+++++DEV+ QRK +Y R+ IL
Sbjct: 602 RLNLPEDVPIEAKMVTRAIRSAQTQVEEQNFEIRKNVLKYDEVMNEQRKVIYAERREILE 661
Query: 654 GAN--ESCSQQIFQYMQAVVD 672
G + E Q + + A VD
Sbjct: 662 GEDHREQVRQMVVDVVGAYVD 682
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D M+++ER++L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F+ ML
Sbjct: 757 DDAMRQLERSILLSVLDSKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFMGML 816
Query: 864 SATRRLTVESL 874
A + TV L
Sbjct: 817 EAMKEETVSLL 827
>gi|339627121|ref|YP_004718764.1| protein translocase subunit secA [Sulfobacillus acidophilus TPY]
gi|339284910|gb|AEJ39021.1| protein translocase subunit secA [Sulfobacillus acidophilus TPY]
Length = 852
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/423 (49%), Positives = 288/423 (68%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL+DG IAEMKT VVTVNDYLA+RDA
Sbjct: 86 MRHFDVQLIGGMVLNDGRIAEMKTGEGKTLVATLAAYLNALPGQGVHVVTVNDYLARRDA 145
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGL VGLIQ M ER++ Y DITY N+E GFDYLRDN+ + +V
Sbjct: 146 KWMGQLYEFLGLKVGLIQHDMEAPERKAAYAADITYGTNNEFGFDYLRDNMVLTLDDMVQ 205
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG+ + Y A++ L +G YTV+ K
Sbjct: 206 RG---LHYAIVDEVDSILIDEARTPLIISGQGERSTELYYTFARIVRNLKEGRDYTVDEK 262
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE G+A E L ++L+D+ +A ++ AL+A+ +RD Y+V++G+ +I
Sbjct: 263 MKAVAPTEAGVAKVERMLGVSNLYDDAHLDYAHYLNQALRAQALMKRDRDYVVKDGEVII 322
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KIQ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 323 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIQEETQTLATITFQNYFRMYQKLAGMTGTAI 382
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + VI VPTN P IR D P + T K+ +E+E ++R RPVLVG
Sbjct: 383 TEEEEFRKIYGLDVIVVPTNKPMIRKDYPDVVYKTEAAKFRAVVREIEELYRQRRPVLVG 442
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE+LS +LK++GIPHNVLNA KY +EAE +AQAG+ A+TI+TNMAGRGTDI
Sbjct: 443 TVSIEKSEHLSQMLKERGIPHNVLNA--KYHEQEAEIIAQAGQPGAVTIATNMAGRGTDI 500
Query: 397 ILG 399
+LG
Sbjct: 501 VLG 503
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 169/354 (47%), Gaps = 67/354 (18%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D+ + F+ T
Sbjct: 503 GPGVAEMGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDFLRLFAAPTLS 562
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ DED PIE A+ R + Q E F RK ++++D+V+ +QR+ VY
Sbjct: 563 V--LMDRLGVDEDDPIESPALTRAIESAQKKVEARNFDARKHVLQYDDVMNLQREVVYKQ 620
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ILT S + ++ V+++ + + P H W L+
Sbjct: 621 RRDILT--QPSLRDDVLHMLKGVIEDAVDAHCPPNLHREEWDLE---------------- 662
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
L+KS+ E+ + P P + +G+ R D+
Sbjct: 663 --------ALVKSLAEV-----------FLPLDTVPLDEIQGMSR-------------DE 690
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L + LLR G+ L A +E M+E+ER ++++ +D W +HL
Sbjct: 691 LVET--------LLR--YGEELYAK-----KEEEIGPDNMRELERVIMLRVVDAKWVEHL 735
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
M L V +R++G R+PL EYK + F +M+ A R + L +P
Sbjct: 736 DAMEALREGVGLRAYGQRDPLVEYKTEAYDMFQNMVGAIREEVIRMLFHVQMAP 789
>gi|358458557|ref|ZP_09168765.1| Protein translocase subunit secA [Frankia sp. CN3]
gi|357078080|gb|EHI87531.1| Protein translocase subunit secA [Frankia sp. CN3]
Length = 993
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/438 (48%), Positives = 290/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+I+EMKT V+TVNDYLAQRDAE
Sbjct: 80 RHFDVQIMGGAALHLGNISEMKTGEGKTLVSTLPAYLNALAGKGVHVITVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGLS+G+I M P RR Y CD+TY N+E GFDYLRDN+A + E+LV R
Sbjct: 140 NMGRVHRFLGLSIGVIHPQMPPSARREQYACDVTYGTNNEFGFDYLRDNMAWSGEELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAI+DE DS+LIDE R PL+ISG A + Y A++A LL++ + Y VE
Sbjct: 200 G---HNFAIIDEADSILIDEARTPLIISGPADQPTRWYTEFARIAPLLIRDVDYEVEEGK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P ++ N+LKAKE Y+ D YIV +G+ LI+
Sbjct: 257 RTVAITESGVEKVEDQLGIENLYESVNTPLVGYLNNSLKAKELYKLDKDYIVTDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEFTGRILHGRRYSEGMHQAIEAKEKVEIKQENQTLATITLQNYFRLYDKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P IR D P + T K+ ++ + + G+PVLVG+
Sbjct: 377 EAAEFHQTYKLGVVPIPTNKPMIRADQPDVVYKTEVAKFSAVVDDIVARHKKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+ H VLNA K+ REA +A+AGR+ A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKQLTKEGVKHEVLNA--KHHEREAMIIAEAGRRGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 495 LGGNPEFIAQGELRSRGL 512
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 17/215 (7%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E EV+ LGGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 528 ALEKARSSVATEHDEVRELGGLYVLGTERHESRRIDNQLRGRAGRQGDSGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ T + + R+ ED+PIE + R + Q E F IRK+++++DE
Sbjct: 588 DLMRLFNASTVEGI--MDRLQIPEDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYDE 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ +L GA+ + + ++ VD+ I G V + W LD
Sbjct: 646 VMNKQRTVIYEERRKVLEGAD------LHEQVRHFVDDTIAGYVQGATAEGFAEEWDLDT 699
Query: 693 LLKEF-----IAIAGKILDDLFAGISGDTLLKSIE 722
L + + DD G+S D L++ I+
Sbjct: 700 LWTGLGQLYPVGVEAPSPDDR-DGLSTDMLVEDIQ 733
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ G R+PL EY+ +G F +M+
Sbjct: 757 MRELERRVVLAVLDKKWREHLYEMDYLQEGIGLRAMGQRDPLVEYQREGYSMFQTMMEGI 816
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 817 KEESVRLL 824
>gi|377558813|ref|ZP_09788391.1| protein translocase subunit SecA [Gordonia otitidis NBRC 100426]
gi|377524019|dbj|GAB33556.1| protein translocase subunit SecA [Gordonia otitidis NBRC 100426]
Length = 954
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 290/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM PE+R+ Y DITY N+E GFDYLRDN+A + E+LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMTPEQRKVAYAADITYGTNNEFGFDYLRDNMAHSLEELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HNFAVVDEVDSILVDEARTPLIISGPAEGSSKWYTEFARIAPLLERDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG LI+
Sbjct: 255 KTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGDVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F++Y KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRMYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFAAVVDDITERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ +PH+VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLAKRDVPHSVLNA--KFHEQEAQIVAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 5/183 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 534 AAEEADAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 591
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + +++R+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 592 NGAALETIMNRVNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKV 651
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
+Y R++IL G +QI Q + VV + G + W L++L A+
Sbjct: 652 IYGERRTILEGTEH--REQIMQMIAEVVGAYVDGAT-AEGYAEDWDLEQLWTALRALYPT 708
Query: 704 ILD 706
LD
Sbjct: 709 ELD 711
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 760 MRQLERTILLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFTGMLEGL 819
Query: 867 RRLTVESL--VQYWSSP 881
+ T++ L VQ + P
Sbjct: 820 KEETLQYLFNVQVQAEP 836
>gi|377566496|ref|ZP_09795754.1| protein translocase subunit SecA [Gordonia sputi NBRC 100414]
gi|377526345|dbj|GAB40919.1| protein translocase subunit SecA [Gordonia sputi NBRC 100414]
Length = 953
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 288/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM PE+R+ Y DITY N+E GFDYLRDN+A E LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMTPEQRKVAYAADITYGTNNEFGFDYLRDNMAHALEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HNFAVVDEVDSILVDEARTPLIISGPAEGSSKWYTEFARIAPLLERDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ + G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFAAVVDDITERHQAGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ IPH VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLAKRDIPHTVLNA--KFHEQEAQIVAEAGRPGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ +
Sbjct: 541 VRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGAALET 598
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+++R+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R++
Sbjct: 599 IMNRVNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKVIYAERRT 658
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
IL G +QI Q + VV + G + W +D+L
Sbjct: 659 ILEGTEH--REQIMQMIAEVVGAYVDGAT-AEGYAEDWDIDEL 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F+ ML
Sbjct: 760 MRQLERTILLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFVGMLEGL 819
Query: 867 RRLTVESL--VQYWSSP 881
+ T++ L VQ + P
Sbjct: 820 KEETLQYLYNVQVQAEP 836
>gi|418047470|ref|ZP_12685558.1| Protein translocase subunit secA [Mycobacterium rhodesiae JS60]
gi|353193140|gb|EHB58644.1| Protein translocase subunit secA [Mycobacterium rhodesiae JS60]
Length = 927
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 295/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I G+ P+ERR+ Y DITY N+E GFDYLRDN+A + E++V R
Sbjct: 138 WMGRVHRFLGLEVGVILSGLTPDERRAAYHADITYGTNNEFGFDYLRDNMAHSVEEMVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V++K
Sbjct: 198 G---HNYAIVDEVDSILIDEARTPLIISGPADGASHWYSEFARLAPLMKKDTHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NALKAKE + RD +YIVRNG+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFERDKEYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLIGRRYNEGMHQAIEAKENVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V+ + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRPMVRKDQTDLIYKTEEAKYIAVVDDVQERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA K+ +EA +A+AGR+ AIT++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KFHEQEAGIIAEAGRRGAITVATNMAGRGTDVV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLVDQRLRERGL 510
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + + E V +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 527 LPKVKAQAAEEAKHVIEVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 586
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++F+ T + L++R+ +D+PIE + R + Q E+ F IRK+++++DEV
Sbjct: 587 LMRRFNGATLES--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEIRKNVLKYDEV 644
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+ QRK +Y+ R+ IL G E+ ++Q + V+ + G + W L++L
Sbjct: 645 MNQQRKVIYEERRRILEG--ENLAEQAHDMLVDVITAYVNGATSE-GYAEDWDLEQL 698
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLDGL 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|256380295|ref|YP_003103955.1| preprotein translocase subunit SecA [Actinosynnema mirum DSM 43827]
gi|255924598|gb|ACU40109.1| preprotein translocase, SecA subunit [Actinosynnema mirum DSM
43827]
Length = 975
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G I+EM+T VVT NDYLA+RD+E
Sbjct: 79 RHFDVQLMGGAALHLGQISEMRTGEGKTLTSVLPAYLNAIAGKGVHVVTTNDYLAKRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLG++VG I M PE+RR+ Y DITY N+E GFDYLRDN+A + ++ V R
Sbjct: 139 WMGRIHRFLGMTVGAILSDMTPEQRRAAYNADITYGTNNEFGFDYLRDNMAWSLDECVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A + Y A+++ LL + HY ++ +
Sbjct: 199 G---HFFAVVDEVDSILIDEARTPLIISGPADQSSRWYLEFARLSTLLRKDTHYEIDERK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V ++E G+A E L +L++ N P ++ NA+KAKE + +D YIVRNG+ +I+
Sbjct: 256 RTVGVSETGVAFIEDQLGIENLYEAANTPLVGYLNNAIKAKELFSKDKDYIVRNGEVMIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY ++ GMTGTA+T
Sbjct: 316 DEFTGRVLSGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYERMGGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + +++ V+ +PTN P R D P + + K++ +++ G+PVLVG+
Sbjct: 376 EAAEFYQTYKLGVVPIPTNRPMKRRDQPDLVYKSEEAKFQAVAEDIAERHEKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL + IPH VLNA K+ REA +A+AGRK A+T++TNMAGRGTDI+
Sbjct: 436 TSVERSEYLSKLLVRMNIPHEVLNA--KHHDREALIIARAGRKGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP +LA + DR L
Sbjct: 494 LGGNPDILADHELRDRGL 511
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+++D + E V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D
Sbjct: 527 LIEDVKAEVKAESEAVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLRD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + ++++R+ +++PIE + + Q E+ F IRK+++++DE
Sbjct: 587 ELMRR--FNAAMVENVMTRLKVPDELPIEHKWVTNAIRSAQTQVEQQNFEIRKNVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
V+ QRK +Y R +L G E +Q+ ++ V E + G + W LDKL
Sbjct: 645 VMNEQRKVIYAERHRVLAG--EDLREQVTHMIKDVTGEYVDGATAD-GYSEDWDLDKL 699
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML A
Sbjct: 756 MRELERRVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLIEYQREGFDMFNGMLEAL 815
Query: 867 R 867
+
Sbjct: 816 K 816
>gi|441507475|ref|ZP_20989401.1| protein translocase subunit SecA [Gordonia aichiensis NBRC 108223]
gi|441448551|dbj|GAC47362.1| protein translocase subunit SecA [Gordonia aichiensis NBRC 108223]
Length = 958
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 290/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM PE+R+ Y DITY N+E GFDYLRDN+A + ++LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMTPEQRKVAYAADITYGTNNEFGFDYLRDNMAHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HNFAVVDEVDSILVDEARTPLIISGPAEGSSKWYTEFARIAPLLERDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG LI+
Sbjct: 255 KTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGDVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F++Y KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRMYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFAAVVDDITERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ IPH+VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLAKRDIPHSVLNA--KFHEQEAQIVAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 104/170 (61%), Gaps = 5/170 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 534 AAEEADAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 591
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + +++R+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 592 NGAALETIMNRVNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKV 651
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R++IL G +QI Q + VV + G + + W +D+L
Sbjct: 652 IYAERRTILEGTEH--REQIMQMIAEVVGAYVDGATEE-GYAEDWDIDEL 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F+ ML
Sbjct: 760 MRQLERTILLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFVGMLEGL 819
Query: 867 RRLTVESL--VQYWSSP 881
+ T++ L VQ + P
Sbjct: 820 KEETLQYLYNVQVQAEP 836
>gi|444429826|ref|ZP_21225008.1| protein translocase subunit SecA [Gordonia soli NBRC 108243]
gi|443889487|dbj|GAC66729.1| protein translocase subunit SecA [Gordonia soli NBRC 108243]
Length = 947
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 290/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A + E+LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMTPDQRREAYAADITYGTNNEFGFDYLRDNMAHSLEELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + HY V++K
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADSSSKWYAEFARIAPLLEKDTHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ EN P ++ NA+K KE + RD YIVRNG +I+
Sbjct: 255 KTIGVHEAGVELVEDRLGIDNLYEAENSPLVSYLNNAIKVKELFHRDKDYIVRNGDVMIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV E RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLEGRRFNEGLHQAIEAKERVEIKAENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P +R D + T K++ ++ LG+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMVRKDQTDLIYKTEEAKFDAVVDDITERHELGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ IPH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLAKRDIPHSVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGN ++A
Sbjct: 493 LGGNADVIA 501
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 11/162 (6%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ + +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGAALESIMNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 VNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKVIYGERREILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
E +QQ+ + ++D++I V+ Y W LD+L
Sbjct: 663 --EDHAQQV----RKMIDDVIGAYVEGATAEGYAEDWDLDQL 698
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 760 MRQLERTILLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFSGMLEGL 819
Query: 867 RRLTV 871
+ T+
Sbjct: 820 KEETL 824
>gi|452991756|emb|CCQ96913.1| translocase binding subunit (ATPase) [Clostridium ultunense Esp]
Length = 846
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/423 (50%), Positives = 282/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEMKT VVTVNDYLA RD
Sbjct: 80 MRHFDVQLIGGMVLHDGRIAEMKTGEGKTLVATLAVYLNALEGKGVHVVTVNDYLAGRDK 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++ FLGL+VGL G+ +E+++ Y+ DITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 NEMGKIYEFLGLTVGLNVHGLSNQEKQAAYQADITYGTNNEFGFDYLRDNMVLYKEQIVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAIVDEVDS+LIDE R PL+ISG A K Y A + A L YTV++K
Sbjct: 200 R---PLHFAIVDEVDSILIDEARTPLIISGMAKKGTDLYYAADRFASRLRADEDYTVDVK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LTE+G+ AE +L+D N V ALKA +RDV Y+V +G+ +I
Sbjct: 257 ANAATLTEKGVEKAEEFFHIENLYDPANMEINHHVQQALKAHTLMKRDVDYVVEDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL++Q +S+ +A IT Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMHGRRYSDGLHQAIEAKEGLRVQQESMTLATITLQNYFRMYKKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V+ +PTN P IRVD P F T R K+ +E++ + G+PVLVG
Sbjct: 377 TEEEEFKSIYGMDVVVIPTNRPMIRVDAPDVIFKTERAKFRAVVEEIKRRHQTGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS+ LK+ IPHNVLNA KY A+EAE +A+AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TISIEISELLSEHLKKLKIPHNVLNA--KYHAQEAEIIAKAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 KLG 497
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HE+RRIDNQLRGRAGRQGDPG ++F +S++D++ +KF +
Sbjct: 497 GEGVAELGGLCIIGTERHEARRIDNQLRGRAGRQGDPGFSQFYISMEDDLMRKFGSENMM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ ED PIE I + + Q E F R+ ++++D+V+ QR +Y
Sbjct: 557 G--MMDRLGFTEDEPIESRMITKAVETAQKRVEATNFDRRRVVLQYDDVMNQQRDIIYSQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L N I M++ + ++ + P W L L+
Sbjct: 615 RREVLFSDN--VKHIITSMMESHLKHVVGAHCPDELVPEEWDLGALI 659
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ VL++++D W DH+ M++L +++R++ +PL EY+++G + F M+ +
Sbjct: 709 MREFEKVVLLRSVDSKWMDHIDAMDQLRQGIHLRAYAQTDPLREYQLEGFQMFNEMIRS 767
>gi|336177154|ref|YP_004582529.1| protein translocase subunit secA [Frankia symbiont of Datisca
glomerata]
gi|334858134|gb|AEH08608.1| Protein translocase subunit secA [Frankia symbiont of Datisca
glomerata]
Length = 986
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/438 (50%), Positives = 287/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT +VTVNDYLAQRDAE
Sbjct: 79 RHFDVQIMGGAALHLGNIAEMKTGEGKTLVSTLPAYLNALSRKGVHIVTVNDYLAQRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I M P RR Y DITY N+E GFDYLRDN++ + E+LV R
Sbjct: 139 NMGRVHRFLGLTVGVIHPQMPPAVRRQQYEADITYGTNNEFGFDYLRDNMSWSGEELVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A LV+ + Y VE
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADNPTRWYTEFARIAPALVRDVDYEVEEGK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+A E L ++L++ N P ++ NALKAKE YRRD YIV +G+ LI+
Sbjct: 256 RTVAITEGGVAKVEDQLGIDNLYESVNTPLVGYLNNALKAKELYRRDKDYIVTDGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 316 DEFTGRVLHGRRYSEGMHQAIEAKEKVEIKQENQTLATITLQNYFRLYDKLSGMTGTAMT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ + V+ +PTN P IR D P + T K+ ++ G+PVLVG+
Sbjct: 376 EAAEFHQIYTLGVVPIPTNKPMIRADQPDVVYKTEVAKFSAVVDDIAERHDRGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSV SEYLS L ++G+ H VLNA K REA +A+AGR+ A+T++TNMAGRGTDI+
Sbjct: 436 TSVAKSEYLSKELTKRGVKHEVLNA--KQHEREASIIAEAGRRGAVTVATNMAGRGTDIM 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ LA+ + R L
Sbjct: 494 LGGNPEFLAQIELRQRGL 511
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 121/212 (57%), Gaps = 11/212 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ S E EV GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 527 ALEKARASVSTEHEEVLAFGGLYVLGTERHESRRIDNQLRGRAGRQGDRGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F+ + AV+ ++ R+ ED+PIE + R + Q E F IRK+++++D
Sbjct: 587 DLMRLFN---AAAVEGIMDRLNIPEDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYD 643
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL- 693
EV+ QR +Y+ R+ +L GA+ +Q+ ++ V+ + G +P W LD L
Sbjct: 644 EVMNKQRTVIYEERRKVLEGAD--LHEQVRHFIDDTVEAYVRGAT-AEGYPEEWDLDTLW 700
Query: 694 --LKEFIAIAGKI-LDDLFAGISGDTLLKSIE 722
L E + ++ D G++ +TL++ ++
Sbjct: 701 SGLGELYQVGVEVPAPDDREGLTAETLIEELQ 732
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D ++E+ER V++ LD WR+HL M+ L + +R+ G R+PL EY+ +G F +M+
Sbjct: 753 DPLIRELERRVVLAVLDRKWREHLYEMDYLQEGIGLRAMGQRDPLVEYQREGYDMFQTMM 812
Query: 864 SATRRLTVESL 874
+ +V L
Sbjct: 813 EGIKEESVRLL 823
>gi|1513220|gb|AAB06754.1| SecA [Mycobacterium smegmatis]
Length = 957
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/442 (48%), Positives = 295/442 (66%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPSYLNALSGKGVHVVTVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I GM P+ERR+ Y DITY N+E GFDYLRDN+A + + +V R
Sbjct: 138 WMGRVHRFLGLDVGVILSGMTPDERRAAYAADITYGTNNEFGFDYLRDNMAHSVDDMVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++ ++ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASHWYQEFARIVPMMEKDVHYEVDLRK 254
Query: 159 NSVELT----EEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+V + E G+ E L ++L++ N P ++ NALKAKE ++RD YIVRNG+
Sbjct: 255 RTVGVHVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFQRDKDYIVRNGE 314
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTG
Sbjct: 315 VLIVDEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLSGMTG 374
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE E +++++ V+ +PTN P +R D + T K+ +V G+PV
Sbjct: 375 TAETEAAELHEIYKLGVVPIPTNKPMVRQDQSDLIYKTEEAKFLAVVDDVAERHAKGQPV 434
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
L+G+TSVE SEYLS +L ++ +PHNVLNA KY +EA +A+AGR+ A+T++TNMAGRG
Sbjct: 435 LIGTTSVERSEYLSKMLTKRRVPHNVLNA--KYHEQEANIIAEAGRRGAVTVATNMAGRG 492
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGN LA K + +R L
Sbjct: 493 TDIVLGGNVDFLADKRLRERGL 514
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C+ E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLPQVKAECAKEAEQVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T L++R+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 590 ELMRRFNGATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFEVRKNVLKYDE 647
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVD 672
V+ QRK +Y R+ IL G N E + + + A VD
Sbjct: 648 VMNQQRKVIYAERRRILEGENLAEQAHKMLVDVITAYVD 686
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML A
Sbjct: 764 MRQLERNVLLNVIDRQWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEAL 823
Query: 867 RRLTV 871
+ +V
Sbjct: 824 KEESV 828
>gi|169832219|ref|YP_001718201.1| preprotein translocase subunit SecA [Candidatus Desulforudis
audaxviator MP104C]
gi|226732189|sp|B1I6D8.1|SECA_DESAP RecName: Full=Protein translocase subunit SecA
gi|169639063|gb|ACA60569.1| preprotein translocase, SecA subunit [Candidatus Desulforudis
audaxviator MP104C]
Length = 903
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/430 (49%), Positives = 285/430 (66%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MRHFDVQIMGGVVLHQGKIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RFLGLS GLI G+ +R+++Y D+ Y N+E GFDYLRDN+A LV
Sbjct: 139 EWMGHIYRFLGLSTGLIVHGLDARQRQASYAADVIYGTNNEFGFDYLRDNMAMYPRDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG++ K Y A++ L H+ V+ K
Sbjct: 199 R---DLYYAIVDEVDSILIDEARTPLIISGQSGKPTDTYYTMARLVPKLKAETHFAVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG A E L ++L D E++ + ALKA +RD Y+V++G+ +I
Sbjct: 256 ARTVSLTEEGFARCEELLNIDNLSDPEHEEVLHHLNQALKAHALMKRDRDYVVKDGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRMYEKLAGMTGTAD 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + V+ VPT+ P IR DLP F T GK+ +E+ + G+PVLVG
Sbjct: 376 TEAEEFKKIYGLDVVVVPTHKPMIREDLPDAVFKTEEGKFRAVVEEIAARHATGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +L ++GIPH VLNA KY +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEVLSRMLTRRGIPHQVLNA--KYHEKEAEIVAQAGRIGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
+LGGNP LA
Sbjct: 494 MLGGNPSFLA 503
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E V LGGL +IGT HE+RRIDNQLRGR GRQGDPG+T+F V+L D++ + F D
Sbjct: 551 EHDRVVALGGLFIIGTERHEARRIDNQLRGRCGRQGDPGATQFFVALNDDLLRLFGGDN- 609
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
L+ R+ DED P+E I + L Q E F IRK ++ +D+V+ QR+ +Y
Sbjct: 610 -IAGLMDRLKMDEDAPLEHPLISKSLETAQRRVENRNFSIRKHVLNYDDVINQQRELIYR 668
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ +L G E + Q M+ V + + +P W+ + L
Sbjct: 669 QRRQVLCG--EDLRPVVRQMMEEVAGQAVTAFAPEGVYPEEWNYEGL 713
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER ++++ +D W DHL M++L V +R++G ++PL EYK + F +M+++
Sbjct: 771 MREIERVLMLRIVDEKWMDHLDAMDQLREGVGLRAYGQKDPLVEYKFESFDMFQNMIASI 830
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ TV+ L + P + E
Sbjct: 831 QEETVKKLFRVRVVPPQQAE 850
>gi|335038551|ref|ZP_08531783.1| Protein translocase subunit secA [Caldalkalibacillus thermarum
TA2.A1]
gi|334181553|gb|EGL84086.1| Protein translocase subunit secA [Caldalkalibacillus thermarum
TA2.A1]
Length = 850
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 286/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVN+YLA+RD+
Sbjct: 80 MRHFDVQLLGGIVLHKGEIAEMKTGEGKTLVATLPIYLNALTGKGVHLVTVNEYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGL+VGL GM +E++ Y D+TY N+E GFDYLRDN+ EQ+V
Sbjct: 140 EQMGKLYNFLGLTVGLNISGMSQQEKKEAYAADVTYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+LIDE R PL+ISG+A + Y A + LV+ YTV+ K
Sbjct: 200 R---PLNFAIVDEVDSILIDEARTPLIISGQAQRSTQYYQAADRFVASLVKDRDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG+A AE ++L+D N + ALKA+ RRDV Y+V+NG+ +I
Sbjct: 257 ARNVMLTEEGVAKAERYFGIDNLYDHANVLINHHITQALKARVIMRRDVDYVVQNGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLKI +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMHGRRYSDGLHQAIEAKEGLKIHQESMTLATITFQNYFRMYKKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V +PTN P IR DLP + T K+ +E+ + G+PVLVG
Sbjct: 377 TEEEEFRKIYGLDVYVIPTNKPMIRKDLPDMVYKTEAAKFRAVVKEIVKRHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA K+ REAE +AQAG++ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIEKSELLSAMLKKEGIPHQVLNA--KHHEREAEIIAQAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F +
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFISLEDELIRRFGGEN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ DED PIE I R + Q E + F IRK L+++D+V+ QR+ +Y
Sbjct: 555 IMGMMERLGMDEDQPIESRMITRAIEKAQERVEGHNFDIRKWLLQYDDVINQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L +S + +++VV+ I+ + + P W ++
Sbjct: 615 RREVLE--RDSLRDVVEGMLKSVVERIVNLHTPDSEVPEDWDYQAII 659
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ V+++ +D W DH+ M++L +++R++G +PL Y+++G F +M+ A
Sbjct: 709 MREFEKVVVLRAVDTKWMDHIDAMDQLRQGIHLRAYGQTDPLRAYQMEGFEMFQNMIEA 767
>gi|410659495|ref|YP_006911866.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Dehalobacter sp. DCA]
gi|410662473|ref|YP_006914844.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Dehalobacter sp. CF]
gi|409021850|gb|AFV03881.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Dehalobacter sp. DCA]
gi|409024829|gb|AFV06859.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Dehalobacter sp. CF]
Length = 836
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/429 (49%), Positives = 285/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEMKT VVTVNDYLA RDA
Sbjct: 79 RHYDVQLIGGMVLHDGRIAEMKTGEGKTLVATLPTYLNALTGLGVHVVTVNDYLATRDAN 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +V+ FLGLSVGLI G+ E+RR++Y DITY N+E GFDYLRDN++ N +V R
Sbjct: 139 WMGQVYDFLGLSVGLIVHGLTHEQRRTSYNADITYGTNNEFGFDYLRDNMSVNPAAVVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y AKV L Y V K+
Sbjct: 199 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYFRVAKVVPRLKPEEDYHVNEKD 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE G++ E L ++L+D+ ++ A V ALKA ++ D Y+V++G+ +I+
Sbjct: 256 RVVTLTENGVSRVETMLGVDNLYDDLHNEVAHHVNQALKAHTLFKLDRDYVVKDGQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +KI+ +S +A IT+Q+ F+++ KL GMTGTAKT
Sbjct: 316 DEFTGRLMFGRRYSEGLHQAIEAKENVKIERESQTLATITFQNFFRMFKKLGGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF+ ++++ V+EVPTNLP +R DLP + T GK+ ++ G+PVLVG+
Sbjct: 376 EEQEFINIYRLDVVEVPTNLPMVRQDLPDVIYRTEEGKFNAVVNDISEKNAKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SE LSD+LK++G+PH VLNA K+ EA+ VA+AG + +TI+TNMAGRGTDI+
Sbjct: 436 ISIEKSEKLSDMLKKKGVPHQVLNA--KFHELEAQIVAKAGEQGMVTIATNMAGRGTDIV 493
Query: 398 LGGNPKMLA 406
LG K L
Sbjct: 494 LGEGVKELG 502
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 166/341 (48%), Gaps = 73/341 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS++F +SL D++ + F D
Sbjct: 495 GEGVKELGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSQFYISLDDDLMRLFGGDNIA 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ D+ +P+E + R + Q E F IRK ++ +D+V+ QR+ +Y
Sbjct: 555 G--LMDKLGMDDSVPVESKIVSRSIETAQKRVEGRNFDIRKHVLNYDDVMNKQREIIYSQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+S+LTG E+ +Q+ ++ K++ D
Sbjct: 613 RRSVLTG--ENLKEQVMDMIE----------------------------------KVIAD 636
Query: 708 LFAGISGDTLLKSIEELPELNSID-INNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
A SG++ EE ++ +D ++N PD P
Sbjct: 637 TTARYSGNSPYP--EEWDLVSFLDYVDNVILPDHDFTP---------------------- 672
Query: 767 DLTKNGRYRATTNLLRKYLGDILI--ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+NL ++ + ++L L ++ES++ M+++ERAV ++ +D W+
Sbjct: 673 --------EQISNLAKEEVEELLTDRVHELYEIRESQFGSDLMRQIERAVALQVVDTRWK 724
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+HL M+ L + +R++G R+PL EYK + F M+ +
Sbjct: 725 EHLDAMDSLREGIGLRAYGQRDPLLEYKNEAFDMFQGMVES 765
>gi|379737446|ref|YP_005330952.1| protein translocase subunit secA [Blastococcus saxobsidens DD2]
gi|378785253|emb|CCG04926.1| Protein translocase subunit secA [Blastococcus saxobsidens DD2]
Length = 1008
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 284/438 (64%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQ++GGA LH G+IAEM+T VVTVNDYLA+RDAE
Sbjct: 79 RHFRVQLMGGAALHLGNIAEMRTGEGKTLTGVLPAYLNALTGNGVHVVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLSVG I G P +RR Y CDITY N+E GFDYLRDN+A + LV R
Sbjct: 139 WMGRVHRFLGLSVGSILSGQTPAQRRELYACDITYGTNNEFGFDYLRDNMAWSKADLVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++ L+ + +HY VE
Sbjct: 199 G---HHYAIVDEVDSILIDEARTPLIISGPAESSAKWYGEFARIVPLMRRDVHYEVEEDK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TEEG+ E L +L++ N P ++ NALKAKE +++D QYIV NG+ LI+
Sbjct: 256 RTVAVTEEGVEFVEDQLGIENLYEAVNTPLIGYLNNALKAKELFKKDQQYIVANGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE +KI+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 316 DEFTGRVLSGRRYNEGMHQAIEAKEKVKIKDENQTLATITLQNYFRLYDKLSGMTGTAQT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + + + V+ +PTN P +R D + T + K++ +++ G+PVLVG+
Sbjct: 376 EAAELNQTYSLGVVPIPTNRPMVRQDRSDVIYKTEKAKFDSVVEDIAERHEAGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE LS L +GIPH VLNA K AREA +AQAGR A+T++TNMAGRGTDI
Sbjct: 436 ASVEKSELLSKYLLTRGIPHEVLNA--KNHAREAAIIAQAGRPGAVTVATNMAGRGTDIQ 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN + +A + + R L
Sbjct: 494 LGGNAEFIADEALRARGL 511
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 179/364 (49%), Gaps = 77/364 (21%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 527 ALEAAKSQVKAEHEEVTEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ ++F+ ++ R+ +D+ PIE + R +L Q E+ F +RK+++++DE
Sbjct: 587 DLMRRFNGPMLESMMTTLRVPDDQ--PIESKMVSRAILSAQTQVEQQNFEVRKNVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QR +YD R+ +L GA+ + + ++ +VD+++ VD Y W LD+
Sbjct: 645 VLNRQRTVIYDERRKVLEGAD------LHEQVRTMVDDVVSAYVDGATETGYAEDWDLDQ 698
Query: 693 L---LKEFIAIAGKILDDLFAGISGDTLLKSIE--ELPELNSIDINNFYFPDLPKPPNLF 747
L LK + G++ D LL S+ E +L++ D+ + D+
Sbjct: 699 LWTGLKSLYPV----------GVTVDELLGSVADGEQSDLSADDLKSAMLDDV------- 741
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+RA +E+R M
Sbjct: 742 --------------------------HRAYEE------------------REARLGSEVM 757
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+E+ER VL+ LD WR+HL M+ L + +++R+ +R+P+ EY+ +G F++ML +
Sbjct: 758 RELERRVLLSVLDRKWREHLYEMDYLRAGIHLRAMANRDPVVEYQREGYDMFVAMLDGIK 817
Query: 868 RLTV 871
+V
Sbjct: 818 EESV 821
>gi|442804146|ref|YP_007372295.1| protein translocase subunit SecA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739996|gb|AGC67685.1| protein translocase subunit SecA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 910
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 289/447 (64%), Gaps = 44/447 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 79 LRHYRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLAKRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V++FLG+SVG+I G+ ERR Y CDITY N+E GFDYLRDN+ E +V
Sbjct: 139 EWMGKVYQFLGMSVGVIVHGLDSNERRKAYACDITYGTNNEFGFDYLRDNMVVYLEDMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R +FAIVDEVDS+LIDE R PL+ISG K Y A L + +
Sbjct: 199 RG---HNFAIVDEVDSILIDEARTPLIISGIGDKSTDLYYKADTFVRRLKKKVFTETDDK 255
Query: 151 --------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
Y V+ K ++ LT G+A AE ++L D EN + + ALKA
Sbjct: 256 TLDDDIDADYIVDEKAHTATLTARGVAKAEEFFHIDNLSDIENMAISHHINQALKAHGLM 315
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RDV Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKEG+ ++ +S +A IT+Q+
Sbjct: 316 KRDVDYVVKDGEVIIVDEFTGRLMYGRRYSDGLHQAIEAKEGVTVEKESKTLATITFQNY 375
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KLSGMTGTA TEE+EF ++ + V+ +PTNLP IR+D P + T K+ +
Sbjct: 376 FRLYKKLSGMTGTALTEEQEFRDIYNLDVVAIPTNLPVIRIDHPDVVYKTKEAKFRAVIR 435
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
++E + G+PVLVG+ S+E SEYLS LLK++GIPHNVLNA KY +EAE +AQAG+
Sbjct: 436 DIEESHKKGQPVLVGTISIETSEYLSQLLKRRGIPHNVLNA--KYHEKEAEIIAQAGKLG 493
Query: 382 AITISTNMAGRGTDIILGGNPKMLAKK 408
A+TI+TNMAGRGTDI+LGGNP+ LAK+
Sbjct: 494 AVTIATNMAGRGTDIMLGGNPEFLAKQ 520
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V GGL +IGT HESRRIDNQLRGRAGRQGDPG +RF +SL+D++ + F D
Sbjct: 567 EKEKVIAAGGLKIIGTERHESRRIDNQLRGRAGRQGDPGESRFYISLEDDLMRLFGSDR- 625
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
++ + ++D PIE + + Q E F RK+++++D+VL QR+ +Y
Sbjct: 626 -ITGMVEMLGLEDDQPIEHKMLSNAIENAQKKIEGINFNRRKNVLQYDDVLNQQREVIYR 684
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
R +L G E+ + + ++ ++D + +P W
Sbjct: 685 ERLRVLQG--ENLKENFLKMIEGIIDRCVNLYCSENPYPENW 724
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
QE + M+ +ER +L+K +D W DH+ M +L + +R++G ++P+ EY+++G
Sbjct: 773 QEEAFGSEIMRLLERRILLKNVDEKWMDHIDAMEQLKYGIGLRAYGQKDPIVEYRMEGSE 832
Query: 858 FFISMLSATRRLTVESLVQ 876
F M+ + + +++ L+
Sbjct: 833 MFEEMIRSIQEDSIKELMH 851
>gi|158317582|ref|YP_001510090.1| preprotein translocase subunit SecA [Frankia sp. EAN1pec]
gi|158112987|gb|ABW15184.1| preprotein translocase, SecA subunit [Frankia sp. EAN1pec]
Length = 1018
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT +VTVNDYLAQRDAE
Sbjct: 105 RHFDVQIMGGAALHLGNIAEMKTGEGKTLVSTLPSYLNALSGNGVHIVTVNDYLAQRDAE 164
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I M P RR YRCDITY N+E GFDYLRDN++ ++E+LV R
Sbjct: 165 NMGRVHRFLGLTVGVIHPQMPPSVRRQQYRCDITYGTNNEFGFDYLRDNMSWSAEELVQR 224
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFA+VDEVDS+LIDE R PL+ISG A Y +++A LL + + Y VE
Sbjct: 225 G---HHFAVVDEVDSILIDEARTPLIISGPADNPTRWYTEFSRIAPLLERDVDYEVEEGK 281
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V ++E G+ E L +L++ N P ++ NALKAKE Y+RD YIV +G+ LI+
Sbjct: 282 RTVSISEVGVEKVEDQLGIENLYESVNTPLVGYLNNALKAKELYKRDKDYIVTDGEVLIV 341
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 342 DEFTGRVLHGRRYSEGMHQAIEAKEKVEIKQENQTLATITLQNYFRLYDKLSGMTGTAMT 401
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++ + V+ +PTN P R D + T K++ +++ G+PVLVG+
Sbjct: 402 EAAEFHQIYALGVVPIPTNKPMARTDQADVVYKTEIAKFDAVVEDIAERHENGQPVLVGT 461
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+ H VLNA K+ REA + +AGR+ A+T++TNMAGRGTDI+
Sbjct: 462 TSVEKSEYLSKQLAKRGVRHEVLNA--KHHEREAMIIGEAGRRGAVTVATNMAGRGTDIM 519
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 520 LGGNPEFIAQTELRQRGL 537
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 128/244 (52%), Gaps = 14/244 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ E EV GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 553 ALEKARASVKAEHEEVVNAGGLYVLGTERHESRRIDNQLRGRAGRQGDRGESRFYLSLGD 612
Query: 576 EMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F+ + AV+ ++ R+ +D+PIE + R + Q E F IRK+++++D
Sbjct: 613 DLMRLFN---AAAVEGIMDRLNIPDDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYD 669
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EV+ QR +Y+ R+ +L GA+ +Q+ ++ V+ + G +P W L+ L
Sbjct: 670 EVMNKQRTVIYEERRKVLEGAD--LHEQVRHFVDDTVEGYVRGATAD-GYPEEWDLETLW 726
Query: 695 KEF-----IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
+ + DD G++ D LL+ ++ + ++ D D P + R
Sbjct: 727 SGLGLLYPVGVDAPGTDDR-EGLTSDLLLEDLQADAQ-DAYDRREADLGDKPDGEAVMRE 784
Query: 750 IRRK 753
+ R+
Sbjct: 785 LERR 788
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ G R+P+ EY+ +G F +M+
Sbjct: 782 MRELERRVVLAVLDRKWREHLYEMDYLQEGIGLRAMGQRDPVVEYQREGFDMFQTMMEGI 841
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 842 KEESVRLL 849
>gi|378718981|ref|YP_005283870.1| preprotein translocase subunit SecA [Gordonia polyisoprenivorans
VH2]
gi|375753684|gb|AFA74504.1| preprotein translocase, SecA subunit SecA [Gordonia
polyisoprenivorans VH2]
Length = 941
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 288/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A + E+LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSPDQRREAYAADITYGTNNEFGFDYLRDNMAHSLEELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG Y A++A LL + HY V++K
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPTEGSSKWYVEFARIAPLLERDEHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFSAVVDDITERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ IPH VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLTKRDIPHTVLNA--KFHEQEAQIVAEAGRIGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 11/162 (6%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ + +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGAALESIMNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R++IL G
Sbjct: 603 VNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKVIYAERRTILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
++ +QI + +V E++ VD Y W LD+L
Sbjct: 663 SDH--REQILE----MVAEVVGAYVDGATAEGYAEDWDLDEL 698
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 760 MRQLERTILLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFSGMLEGL 819
Query: 867 RRLTVESL 874
+ T++ L
Sbjct: 820 KEETLQFL 827
>gi|392406739|ref|YP_006443347.1| Preprotein translocase subunit SecA [Anaerobaculum mobile DSM
13181]
gi|390619875|gb|AFM21022.1| preprotein translocase, SecA subunit [Anaerobaculum mobile DSM
13181]
Length = 899
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/431 (48%), Positives = 287/431 (66%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+G LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 95 MRHFDVQIMGAIALHEGKIAEMKTGEGKTLVATMPVVLNALEGKGVHVVTVNDYLAKRDA 154
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGLSVG+I M EERR Y D+TY NSE GFDYLRDN+A + +QLV
Sbjct: 155 EWMGKVYRFLGLSVGVINPFMSAEERRKAYEADVTYGTNSEFGFDYLRDNMAISPQQLVQ 214
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + Y +A K+A L + ++ K
Sbjct: 215 RG---HHYAIVDEVDSILIDEARTPLIISGPSEDSIEPYKIADKIARSLTLNEDFELDEK 271
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V LTE GI E L +D++ E ++ ALKA+ +++DV Y+V++G+ +
Sbjct: 272 EKNVALTEAGIRHCEKILGIDDIYAEVETSELLHKIVQALKARYLFKKDVHYVVKDGEVI 331
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKEG++I ++ +A IT Q+ F++Y KL+GMTGTA
Sbjct: 332 IVDEFTGRLMYGRRYSDGLHQAIEAKEGVRIGRENQTLATITLQNYFRMYHKLAGMTGTA 391
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF +++ + V+ +PT+ P IR D+P + T R K+ E++ + +PVLV
Sbjct: 392 ATEAEEFKEIYGLEVVVIPTHKPMIRQDMPDVIYKTKREKFAAVADEIKECYERRQPVLV 451
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ENSE LS LL + IPH VLNA KY +EA+ +AQAGR A+T++TNMAGRGTD
Sbjct: 452 GTTSIENSEKLSKLLAARRIPHQVLNA--KYHEKEAKIIAQAGRIGAVTVATNMAGRGTD 509
Query: 396 IILGGNPKMLA 406
I+LGGNP+ LA
Sbjct: 510 ILLGGNPEFLA 520
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
Y ++L++ + C E V LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF +
Sbjct: 537 AYGNLLEEFKKLCEEEHERVVALGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFYL 596
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D++ + F D + + ++ E I+ + R + Q E+Y+F IRK L+
Sbjct: 597 SLEDDLLRLFGSDKIQGI--MEKLGMKEGEAIDHPLLSRAIESAQKKVEQYHFDIRKQLL 654
Query: 632 EFDEVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEII--FGNVDP 681
++D V+ QR +YD R+ IL + E Q I + V++E G DP
Sbjct: 655 QYDSVMNQQRMAIYDERKRILLSDDLIEHTWQIITDALDGVLEEHFPDEGEADP 708
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +L++ LD W++HL+ M+ L + +R+ G ++PL EY+ + F ML + R
Sbjct: 768 KMILLRVLDAHWKEHLLAMDELRRGIGLRALGQKDPLLEYQFESYNLFQQMLGSIR 823
>gi|359767084|ref|ZP_09270877.1| protein translocase subunit SecA [Gordonia polyisoprenivorans NBRC
16320]
gi|359315458|dbj|GAB23710.1| protein translocase subunit SecA [Gordonia polyisoprenivorans NBRC
16320]
Length = 941
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 288/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A + E+LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSPDQRREAYAADITYGTNNEFGFDYLRDNMAHSLEELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG Y A++A LL + HY V++K
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPTEGSSKWYVEFARIAPLLERDEHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFSAVVDDITERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ IPH VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLTKRDIPHTVLNA--KFHEQEAQIVAEAGRIGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 11/162 (6%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ + +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGAALESIMNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R++IL G
Sbjct: 603 VNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRKVIYAERRTILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
++ +QI + +V E++ VD Y W LD+L
Sbjct: 663 SDH--REQILE----MVAEVVGAYVDGATAEGYAEDWDLDEL 698
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 760 MRQLERTILLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFSGMLEGL 819
Query: 867 RRLTVESL 874
+ T++ L
Sbjct: 820 KEETLQFL 827
>gi|334342137|ref|YP_004547117.1| preprotein translocase subunit SecA [Desulfotomaculum ruminis DSM
2154]
gi|334093491|gb|AEG61831.1| preprotein translocase, SecA subunit [Desulfotomaculum ruminis DSM
2154]
Length = 874
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/430 (49%), Positives = 288/430 (66%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT V+TVNDYLA RD+
Sbjct: 79 MRHFDVQLIGGMVLHQGRIAEMKTGEGKTLVATLPVYLNALTGQGVHVITVNDYLATRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGLSVGLI G+ E+RR Y DITY N+E GFDYLRDN+A + EQLV
Sbjct: 139 EWMGQLYRFLGLSVGLIVHGLDAEQRRQAYAADITYGTNNEFGFDYLRDNMALHPEQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +++IVDEVDS+LIDE R PL+ISG A K Y A + LV+ YTV+ K
Sbjct: 199 RV---LNYSIVDEVDSILIDEARTPLIISGVADKPTDLYYTMAAIVPKLVKDEDYTVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LTE+G++ E L +L+D+ N + ALKA +RD Y+V++G+ +I
Sbjct: 256 AHTALLTEDGVSRVEKFLAVTNLYDDVNMELTHHLNQALKAHALMKRDRDYVVKDGEVVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRMYKKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN IR D+ + T GK+ ++V G+PVLVG
Sbjct: 376 TEEEEFRKIYGLDVVVIPTNQSMIRNDMSDVVYKTEDGKFRAVVEDVAKRHATGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LK++G+PH VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEMLSQRLKKRGVPHQVLNA--KFHDKEAEIIAQAGRLNAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
+LGGNP+ LA
Sbjct: 494 LLGGNPEALA 503
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 535 ERQRVLEVGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYISLEDDLMRLFGSDNI 594
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
L+ R+ ++DMPIE I + + Q E F IRK ++ +D+V+ QR+ +Y
Sbjct: 595 AG--LMERLGMEDDMPIEHGLISKSIESAQKRVENRNFDIRKHVLNYDDVMNQQRELIYA 652
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +LTG E+ ++ I + + VV++ + + H W L LL
Sbjct: 653 QRRQVLTG--ENMAENIRETIAKVVEQSVESYIPEGVHQEEWDLAGLL 698
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER VL++ +D W DHL M++L + +R++G ++P+ EYK + F +M+++
Sbjct: 748 LREIERMVLLRLVDEKWMDHLDAMDQLREGIGLRAYGQKDPVIEYKFEAYEMFNNMIASI 807
Query: 867 RRLTVESLVQY 877
+ E +V+Y
Sbjct: 808 Q----EDVVRY 814
>gi|71916621|gb|AAZ56523.1| protein translocase subunit secA [Thermobifida fusca YX]
Length = 986
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 294/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 99 RHFDVQLMGGAALHFGNIAEMKTGEGKTLTATLPVYLNALTGKGVHVVTVNDYLARRDAE 158
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R++RFLG+ VG+I M P RR Y+ DITY N+E GFDYLRDN+A + + V R
Sbjct: 159 TMGRIYRFLGMEVGVISPEMSPAARRKAYQADITYGTNNEFGFDYLRDNMARSLDNCVQR 218
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A ++ Y AK+A L + + Y V+ K
Sbjct: 219 G---HHYAIVDEVDSILIDEARTPLIISGPAEQNSRWYVEFAKIAPRLRRDVDYEVDEKK 275
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+A E L ++L++ N P F+ NA+KAKE YRRD YIV++G+ LI+
Sbjct: 276 RTVGITEAGVAKVEDWLGIDNLYESVNTPLISFLHNAIKAKELYRRDRDYIVKDGEVLIV 335
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE +KI+ ++ +A+IT Q+ F+LY KL+GMTGTA T
Sbjct: 336 DEFTGRILRGRRYNEGMHQAIEAKEKVKIKEENQTLAKITLQNYFRLYEKLAGMTGTAVT 395
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + + + V+ +PTN P IR DL + T K++ +++ G+PVLVG+
Sbjct: 396 EAAEFQQTYNLGVVPIPTNKPMIREDLRDLVYKTEEAKFQAIVEDIAECHERGQPVLVGT 455
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS +LK++GIPH VLNA K AREA VA+AG+ A+T++TNMAGRGTDI+
Sbjct: 456 TSVEKSELLSKMLKRRGIPHEVLNA--KNHAREAAIVARAGKLGAVTVATNMAGRGTDIM 513
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP +A + +++R L
Sbjct: 514 LGGNPDFIAAEELQERGL 531
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E +V LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL D
Sbjct: 547 ALERAKKEVEAEHQKVVELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGKSRFYLSLGD 606
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ + + ++R+ +D PIE + + + Q E+ F IRK+++++DE
Sbjct: 607 DLMRLFNGERVQMI--MNRLNLPDDQPIEHKMVTKAIQSAQGQLEQQNFEIRKNVLKYDE 664
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
VL QR+ +Y R+ +L GA+ +Q+ + V+D + + P W L+ L
Sbjct: 665 VLNRQRQVIYAERRKVLEGAD--LREQVRSMIDDVLDSYVR-SATAEGDPEDWDLEHLWT 721
Query: 696 EFIAI 700
F I
Sbjct: 722 AFSQI 726
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER V+++ +D WR+HL M+ L + +R+ RNPL EY+ +G F ML
Sbjct: 776 MREVERQVILQVMDRKWREHLYEMDYLQEGIGLRAMAQRNPLIEYQREGYDMFQEMLEGI 835
Query: 867 RRLTVESLVQYW---SSPMESQ 885
+ ++ L + P ESQ
Sbjct: 836 KEESIRFLFNVEVRVNQPQESQ 857
>gi|404423139|ref|ZP_11004799.1| preprotein translocase subunit SecA [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403654881|gb|EJZ09771.1| preprotein translocase subunit SecA [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 952
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 293/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF+VQI+GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFEVQIMGGAALHFGNVAEMKTGEGKTLTAVLPAYLNALSGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I G+ PEERR+ Y DITY N+E GFDYLRDN+A + E +V R
Sbjct: 138 WMGRVHRFLGLDVGVILSGLTPEERRAAYAADITYGTNNEFGFDYLRDNMAHSVEDMVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+++
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L +L++ N P ++ NA+KAKE ++RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIENLYEAANSPLVSYLNNAIKAKELFQRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLLGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYNKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRPMVRQDQSDLIYKTEEAKYIAVVDDVAERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR A+T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRKIPHNVLNA--KYHEQEANIIAEAGRLGAVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA K + ++ L
Sbjct: 493 LGGNADFLADKRLREKGL 510
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 ASKEAEKVVEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNG 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 594 ATLES--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 651
Query: 644 VYDLRQSILTGAN--ESCSQQIFQYMQAVVD 672
+Y R+ +L G N E + + A VD
Sbjct: 652 IYKERRKLLEGENLQEQAHDMLVDVITAYVD 682
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML A
Sbjct: 760 MRQLERNILLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLDAL 819
Query: 867 RRLTVESL--VQYWSSP 881
+ +V L VQ ++P
Sbjct: 820 KEESVGFLFNVQVEAAP 836
>gi|161723104|ref|YP_290546.2| preprotein translocase subunit SecA [Thermobifida fusca YX]
gi|167016619|sp|Q47LZ9.2|SECA1_THEFY RecName: Full=Protein translocase subunit SecA 1
Length = 968
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 294/438 (67%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 81 RHFDVQLMGGAALHFGNIAEMKTGEGKTLTATLPVYLNALTGKGVHVVTVNDYLARRDAE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R++RFLG+ VG+I M P RR Y+ DITY N+E GFDYLRDN+A + + V R
Sbjct: 141 TMGRIYRFLGMEVGVISPEMSPAARRKAYQADITYGTNNEFGFDYLRDNMARSLDNCVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A ++ Y AK+A L + + Y V+ K
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPAEQNSRWYVEFAKIAPRLRRDVDYEVDEKK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+A E L ++L++ N P F+ NA+KAKE YRRD YIV++G+ LI+
Sbjct: 258 RTVGITEAGVAKVEDWLGIDNLYESVNTPLISFLHNAIKAKELYRRDRDYIVKDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE +KI+ ++ +A+IT Q+ F+LY KL+GMTGTA T
Sbjct: 318 DEFTGRILRGRRYNEGMHQAIEAKEKVKIKEENQTLAKITLQNYFRLYEKLAGMTGTAVT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF + + + V+ +PTN P IR DL + T K++ +++ G+PVLVG+
Sbjct: 378 EAAEFQQTYNLGVVPIPTNKPMIREDLRDLVYKTEEAKFQAIVEDIAECHERGQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS +LK++GIPH VLNA K AREA VA+AG+ A+T++TNMAGRGTDI+
Sbjct: 438 TSVEKSELLSKMLKRRGIPHEVLNA--KNHAREAAIVARAGKLGAVTVATNMAGRGTDIM 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP +A + +++R L
Sbjct: 496 LGGNPDFIAAEELQERGL 513
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL D++ + F+ +
Sbjct: 540 EHQKVVELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGKSRFYLSLGDDLMRLFNGERV 599
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ ++R+ +D PIE + + + Q E+ F IRK+++++DEVL QR+ +Y
Sbjct: 600 QMI--MNRLNLPDDQPIEHKMVTKAIQSAQGQLEQQNFEIRKNVLKYDEVLNRQRQVIYA 657
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
R+ +L GA+ +Q+ + V+D + + P W L+ L F I
Sbjct: 658 ERRKVLEGAD--LREQVRSMIDDVLDSYVR-SATAEGDPEDWDLEHLWTAFSQI 708
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER V+++ +D WR+HL M+ L + +R+ RNPL EY+ +G F ML
Sbjct: 758 MREVERQVILQVMDRKWREHLYEMDYLQEGIGLRAMAQRNPLIEYQREGYDMFQEMLEGI 817
Query: 867 RRLTVESLVQYW---SSPMESQ 885
+ ++ L + P ESQ
Sbjct: 818 KEESIRFLFNVEVRVNQPQESQ 839
>gi|373454575|ref|ZP_09546441.1| preprotein translocase, SecA subunit [Dialister succinatiphilus YIT
11850]
gi|371935850|gb|EHO63593.1| preprotein translocase, SecA subunit [Dialister succinatiphilus YIT
11850]
Length = 820
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 284/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G+IAEM T V+TVNDYLA+RD+
Sbjct: 82 MRHFDVQLIGGIVLHRGNIAEMCTGEGKTLVATAPVYLNALEGKGVHVITVNDYLAKRDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V++FLGLSVGLI + ++R+ Y DITY N+E GFDYLRDN+ + +Q+V
Sbjct: 142 EWMGQVYKFLGLSVGLIVHDLDFQQRKIAYNSDITYGTNNEFGFDYLRDNMVTSLDQMVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ ++DEVDS+LIDE R PL+ISG K Y V AK+ L + YT++ K
Sbjct: 202 R---PLHYCLIDEVDSILIDEARTPLIISGPGQKSTDNYYVMAKLVPHLKKDEDYTIDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE G+A E L +L+D EN + AL+A+ +RD Y+V++G+ +I
Sbjct: 259 QKTVAPTEAGVAKMEKMLHVENLYDAENLELNHLFVQALRAQTMMQRDKDYVVKDGEVVI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL++Q +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 319 VDEFTGRLMYGRRYSDGLHQAIEAKEGLEVQRESQTLATITFQNYFRMYDKLAGMTGTAK 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ +PVI++PTN P R DLP F T RGK+ +EVE G+P+L+G
Sbjct: 379 TEEQEFIKIYGLPVIQIPTNKPIQRKDLPDVVFKTKRGKYRAVVKEVERRHATGQPILIG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +L IPH+VLNA KY +EA VA AG+K A+TI+TNMAGRGTDI
Sbjct: 439 TTSIEQSEELSHMLDAAKIPHSVLNA--KYHEKEAAIVALAGQKGAVTIATNMAGRGTDI 496
Query: 397 ILG 399
LG
Sbjct: 497 QLG 499
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 499 GDGVAALGGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLLRIFGGDNIK 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ DED PI + + Q E F IRK ++E+D+V+ QRK VY+
Sbjct: 559 K--FMEKMGLDEDEPINSRMVSNAIQKAQKRVEARNFDIRKYVLEYDDVMNQQRKVVYEQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ IL G E+ Q+ + + ++++ + DP +P W LLK
Sbjct: 617 RRRILEG--ENMKDQVLRMVDTIIEKGMQTYADPKLYPEEWDFAGLLK 662
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E+AV++K +D W +HL +M+ L + +RS+G RNP+ EYK++ F M A
Sbjct: 711 MRELEKAVMLKVVDSKWMEHLDDMDMLKEGIGLRSYGQRNPIVEYKVEAYDIFEEMQQAM 770
Query: 867 RRLTVESL----VQYWSSPMESQE 886
V L +++ + P E Q+
Sbjct: 771 METIVLYLYHIQIRFATDPEEPQQ 794
>gi|443673699|ref|ZP_21138754.1| preprotein translocase, SecA subunit (fragment), partial
[Rhodococcus sp. AW25M09]
gi|443413701|emb|CCQ17092.1| preprotein translocase, SecA subunit (fragment), partial
[Rhodococcus sp. AW25M09]
Length = 896
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 288/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 99 RHFDVQVMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDSE 158
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLSV +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 159 WMGRVHRFLGLSVDVILSGMTPVERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 218
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A +L HY V+++
Sbjct: 219 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYGEFARIAPMLKADTHYEVDIRK 275
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 276 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVNYLNNAIKAKELYTKDKDYIVRDGEVIIV 335
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 336 DEFTGRILVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 395
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 396 EAAELHQIYGLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 455
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA +A+AGR+ A+T++TNMAGRGTD++
Sbjct: 456 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEATIIAEAGRQGAVTVATNMAGRGTDVV 513
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 514 LGGNPDILA 522
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 107/180 (59%), Gaps = 11/180 (6%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L++ + + V+ GGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 548 LEEVKAQVKADADTVREAGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLGDE 607
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++F+ ++ ++R+ +D+PIE + + + Q E+ F IRK+++++DEV
Sbjct: 608 LMRRFNGGALESI--MTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDEV 665
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+ QR +Y+ R+ IL GA+ ++ ++ ++I VD Y W L++L
Sbjct: 666 MNQQRTVIYEERRRILEGADMEGQ------VEGMITDVITAYVDGATADGYVEDWDLEQL 719
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 781 LRKYLGDILIASYLNVVQESRYDDVY----MKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
LR+ L D A+Y N +E+ D + M+E+ER VL+ LD WR+HL M+ L
Sbjct: 753 LREALLDDARAAYTN--REAEIDGIAGENGMRELERRVLLSVLDRKWREHLYEMDYLKEG 810
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ R+PL EY+ +G F ML + +V
Sbjct: 811 IGLRAMAQRDPLVEYQREGYDMFQGMLEGLKEESV 845
>gi|410667009|ref|YP_006919380.1| protein translocase SecA [Thermacetogenium phaeum DSM 12270]
gi|409104756|gb|AFV10881.1| protein translocase SecA [Thermacetogenium phaeum DSM 12270]
Length = 890
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/432 (49%), Positives = 286/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MRHFDVQLMGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGEGVHIVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RFLGL VG+I G+ +R+ Y D+TY N+E GFDYLRDN+ E++V
Sbjct: 139 EWMGGIYRFLGLKVGVIVHGLDARQRKEAYAADVTYGTNNEFGFDYLRDNMVLRREEIVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+A K Y AKV L + + Y V+ K
Sbjct: 199 R---SLNYAIVDEVDSILIDEARTPLIISGQADKPTDLYYRIAKVIPRLKKDVDYQVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG E L +L DE N A V L+A +RD Y+V++G+ +I
Sbjct: 256 LQTVALTEEGTRKVEKLLGVENLSDEENLELAHHVYQGLRAHALMKRDRDYVVKDGQVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESQTLATITFQNYFRMYRKLAGMTGTAA 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++ + V+ +PT+ P IR D P + T GK+ +E+ +R G+PVLVG
Sbjct: 376 TEEDEFRKIYGLDVVVIPTHKPMIRRDYPDVIYRTEEGKFAAVVEEIAECYRRGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LLK++GIPH VLNA KY +EA+ VAQAGR +TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEMLSRLLKKRGIPHQVLNA--KYHEQEAKIVAQAGRLGMVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ LAK+
Sbjct: 494 LLGGNPEYLAKE 505
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 106/170 (62%), Gaps = 8/170 (4%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF VSL+D++ + F D+
Sbjct: 552 EHEKVVALGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSLEDDLMRLFGSDSI 611
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ + ++ ++ +PIE + R + Q E F +RK ++E+D+V+ QR+ +Y
Sbjct: 612 SGI--MDKLGMNDSIPIEHPLVSRSIESAQKKVESRNFDMRKHVLEYDDVMNQQREVIYS 669
Query: 647 LRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L G + ES + I + ++A V+ + K+P W L++L+
Sbjct: 670 QRRRVLMGEDLRESLQEMITKVVEAAVER----HTAAGKYPEEWDLEELI 715
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER +L++ +D W DHL M++L + +R++G ++PL EYK + F M+ +
Sbjct: 766 MRDLERFILLRVVDTKWMDHLDAMDQLRQGIGLRAYGQKDPLVEYKFEAYHMFQEMIRSI 825
Query: 867 RRLTVESLVQY 877
+ E +V+Y
Sbjct: 826 Q----EDVVRY 832
>gi|288919636|ref|ZP_06413964.1| preprotein translocase, SecA subunit [Frankia sp. EUN1f]
gi|288348925|gb|EFC83174.1| preprotein translocase, SecA subunit [Frankia sp. EUN1f]
Length = 978
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT +VTVNDYLA+RDAE
Sbjct: 80 RHFDVQIMGGAALHMGNIAEMKTGEGKTLVSTLPAYLNALAGDGVHIVTVNDYLARRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I M P RR YRCDITY N+E GFDYLRDN++ ++++LV R
Sbjct: 140 NMGRVHRFLGLTVGVIHPQMPPAARRQQYRCDITYGTNNEFGFDYLRDNMSWSADELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFA+VDEVDS+LIDE R PL+ISG A Y A++A LL + + Y VE
Sbjct: 200 G---HHFAVVDEVDSILIDEARTPLIISGPADNPTRWYTEFARIAPLLERDVDYEVEEGK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P ++ N+LKAKE Y+ D YIV +G+ LI+
Sbjct: 257 RTVAITEAGVEKVEDQLGIENLYESVNTPLVGYLNNSLKAKELYKVDKDYIVTDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEFTGRVLHGRRYSEGMHQAIEAKEKVEIRQENQTLATITLQNYFRLYDKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN R D P + T K++ +++ G+PVLVG+
Sbjct: 377 EAAEFHQIYKLGVVPIPTNKAMARADQPDVVYKTEVAKFDAVVEDIAERHEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+ H VLNA K REA +A+AGR+ A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKQLTKRGVKHEVLNA--KQHEREAHIIAEAGRRGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 495 LGGNPEFIAQAELRQRGL 512
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 14/244 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E V GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 528 ALEKARASVAAEHEAVVDAGGLYVLGTERHESRRIDNQLRGRAGRQGDRGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F+ + AV+ ++ R+ +D+PIE + R + Q E F IRK+++++D
Sbjct: 588 DLMRLFN---AAAVEGIMDRLNIPDDVPIESKIVTRAIRSAQTQVEGQNFEIRKNVLKYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EV+ QR +Y+ R+ +L GA+ +Q+ ++ ++ + G +P W L+ L
Sbjct: 645 EVMNKQRTVIYEERRKVLEGAD--LHEQVRHFVDDTIEGYVRGATGE-GYPEEWDLETLW 701
Query: 695 KEF-----IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
I + DD G++ D LL+ ++ + + D D P + R
Sbjct: 702 TGLGQLYPIGVDAPGTDDR-EGLTSDLLLEDLQADAQ-EAYDRRELDLGDKPDGEAVMRE 759
Query: 750 IRRK 753
+ R+
Sbjct: 760 LERR 763
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ G R+P+ EY+ +G F +M+
Sbjct: 757 MRELERRVVLAVLDRKWREHLYEMDYLQEGIGLRAMGQRDPVVEYQREGFDMFQTMMEGI 816
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 817 KEESVRLL 824
>gi|121535513|ref|ZP_01667322.1| preprotein translocase, SecA subunit [Thermosinus carboxydivorans
Nor1]
gi|121305932|gb|EAX46865.1| preprotein translocase, SecA subunit [Thermosinus carboxydivorans
Nor1]
Length = 835
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 287/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G IAEM+T VVTVNDYLA+RD+
Sbjct: 80 MRHFDVQLLGGIALHEGKIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGLSVGLI G+ +R+ Y D+TY N+E GFDYLRDN+ EQ+V
Sbjct: 140 EWMGKVYRFLGLSVGLIVHGLDYADRKLAYSADVTYGTNNEFGFDYLRDNMVIYPEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y V A++ L +G YTV+ K
Sbjct: 200 R---ELNYAIVDEVDSILIDEARTPLIISGPGEKSTDLYYVLARIVPKLKEGEDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE GIA E AL +L++ +N + AL+A +RD Y+V++G+ +I
Sbjct: 257 ARTVAPTESGIAKVEKALGVKNLYESDNMQLSHHFNQALRAHALMKRDRDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLASITFQNYFRMYRKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P IR DLP + T R K++ +E+ R G+PVLVG
Sbjct: 377 TEEEEFRKIYGLDVVVIPTNKPVIREDLPDVIYKTKRAKYKAVVREIIERHRKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LS +LK++GIPHNVLNA KY EA+ VAQAG++ A+TI+TNMAGRGTDI
Sbjct: 437 TTSIAQSEELSAMLKREGIPHNVLNA--KYHELEAQIVAQAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F D
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRLFGSDNIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 TI--MDKLGMEEDEPIEHPLITRSIEQAQKKVEARNFEIRKYVLEYDDVMNQQREVIYSQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL---KEFIAIAGKI 704
R+ IL G E+ + IF ++ ++D + + +P W D L+ + + A AG++
Sbjct: 615 RRKILMG--ENLREHIFPMIEKIIDRGMELYANEKVYPEEWDYDALIEYCEGYFAPAGRL 672
Query: 705 LDDLFAGISGDTL 717
+ A +S D L
Sbjct: 673 TKEELARLSRDEL 685
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
LTK R + + LR+ L + +Y +E + M+E+E+ V++K +D W DHL
Sbjct: 672 LTKEELARLSRDELREELVKVATEAY--DARERLFGAETMRELEKVVMLKVVDAKWMDHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
M+ L + +R++G +NPL EYKI+ F M+
Sbjct: 730 DAMDMLREGIGLRAYGQKNPLIEYKIEAYDMFQQMI 765
>gi|363890706|ref|ZP_09318022.1| translocase subunit secA 1 [Eubacteriaceae bacterium CM5]
gi|361964448|gb|EHL17483.1| translocase subunit secA 1 [Eubacteriaceae bacterium CM5]
Length = 897
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 287/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 76 MRHFDVQLMGGMVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVITVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ +RR++Y+ DITY N+E GFDYLRDN+ E +V
Sbjct: 136 EWMSKLYGFLGLTTGVIIHGLKDAQRRASYQADITYGTNNEFGFDYLRDNMVTYKENMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+ K Y A + L + YTV+ K
Sbjct: 196 R---ELNYAIVDEVDSILIDEARTPLIISGQGDKSTTLYSQADTFIKTLNKETDYTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LT+EG+ A+ +L D +N + AL+A +RDV Y+V++G+ +I
Sbjct: 253 ENASSLTDEGLEKAQKFFNVENLTDLDNIELYHNINQALRANTLMKRDVDYVVKDGEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y K+SGMTGTAK
Sbjct: 313 VDDFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYNKISGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V+++PTN P R DL + + GK+ +E++ G+PVLVG
Sbjct: 373 TEEEEFRAIYRMDVVQIPTNRPIQRKDLNDSVYKSENGKFRAVIEEIKEHHAKGQPVLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS +LK+QGI H VLNA K +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 433 TISIENSEKLSSMLKKQGIEHEVLNA--KNHKKEAEIVAQAGRFGQVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LA++
Sbjct: 491 ILGGNPEFLAER 502
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ + F + + ++
Sbjct: 557 GGLCIIGTERHESRRIDNQLRGRSGRQGDPGVSKFFISLEDELMRLFGSEKMQS--MVES 614
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ D+D PIE + + + G Q E FGIRK ++E+D+V+ QR +YD R+ +L G
Sbjct: 615 LGMDDDTPIEAGILSKSIEGAQKKVEGKNFGIRKHVLEYDDVMNKQRTIIYDERRRVLEG 674
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
E+ ++I + ++ V +II N + P W +++
Sbjct: 675 --ENIKEEILEMIKKQVQKIIDKNTGDSQDPEEWDYNEI 711
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 774 YRATTNLLRKYLGD--ILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMN 831
++A L ++ L D I +A + +E++ M+E+ER +L++ +D W DH+ M+
Sbjct: 727 FKAEDKLEKQDLYDKAIEVAENRYMQKEAQIGSDTMREIERMILLQMVDTKWMDHIDAMD 786
Query: 832 RLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+L + +R+ G NP+ Y+I+G F +M+ + + TVE + + P
Sbjct: 787 QLKQGIGLRAIGQDNPVRAYQIEGFDMFDAMVESIQEDTVEYVYGFELKP 836
>gi|363894513|ref|ZP_09321594.1| translocase subunit secA 1 [Eubacteriaceae bacterium ACC19a]
gi|361962264|gb|EHL15410.1| translocase subunit secA 1 [Eubacteriaceae bacterium ACC19a]
Length = 897
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 287/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 76 MRHFDVQLMGGMVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVITVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ +RR++Y+ DITY N+E GFDYLRDN+ E +V
Sbjct: 136 EWMSKLYGFLGLTTGVIIHGLKDAQRRASYQADITYGTNNEFGFDYLRDNMVTYKENMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+ K Y A + L + YTV+ K
Sbjct: 196 R---ELNYAIVDEVDSILIDEARTPLIISGQGDKSTTLYSQADTFIKTLNKETDYTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LT+EG+ A+ +L D +N + AL+A +RDV Y+V++G+ +I
Sbjct: 253 ENASSLTDEGLEKAQKFFNVENLTDLDNIELYHNINQALRANTLMKRDVDYVVKDGEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y K+SGMTGTAK
Sbjct: 313 VDDFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYNKISGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V+++PTN P R DL + + GK+ +E++ G+PVLVG
Sbjct: 373 TEEEEFRAIYRMDVVQIPTNRPIQRKDLNDSVYKSENGKFRAVIEEIKEHHAKGQPVLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS +LK+QGI H VLNA K +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 433 TISIENSEKLSSMLKKQGIEHEVLNA--KNHKKEAEIVAQAGRFGQVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LA++
Sbjct: 491 ILGGNPEFLAER 502
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ + F + + ++
Sbjct: 557 GGLCIIGTERHESRRIDNQLRGRSGRQGDPGVSKFFISLEDELMRLFGSEKMQS--MVES 614
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ D+D PIE + + + G Q E FGIRK ++E+D+V+ QR +YD R+ +L G
Sbjct: 615 LGMDDDTPIEAGILSKSIEGAQKKVEGKNFGIRKHVLEYDDVMNKQRTIIYDERRRVLEG 674
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
E+ ++I + ++ V +II N + P W +++
Sbjct: 675 --ENIKEEIVEMIKKQVQKIIDKNTGDSQDPEEWDYNEI 711
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 774 YRATTNLLRKYLGD--ILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMN 831
++A L ++ L D I +A + +E++ M+E+ER +L++ +D W DH+ M+
Sbjct: 727 FKAEDKLEKQDLYDKAIEVAENRYMQKEAQIGSDTMREIERMILLQMVDTKWMDHIDAMD 786
Query: 832 RLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+L + +R+ G NP+ Y+I+G F +M+ + + TVE + + P
Sbjct: 787 QLKQGIGLRAIGQDNPVRAYQIEGFDMFDAMVESIQEDTVEYVYGFELKP 836
>gi|166919150|sp|Q8RCB4.2|SECA_THETN RecName: Full=Protein translocase subunit SecA
Length = 898
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 285/432 (65%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFKVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M P ER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMGPAERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGVGEKSTDMYKLADRFVRTLKKDEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+A AE +L D EN + + ALKA +RD Y+V++G+ +I
Sbjct: 257 AKAVSLTEKGVAKAEKFFGIKNLADIENMEISHHIQQALKAHAIMKRDRDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT Q+ F++Y KL+GMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITLQNYFRMYKKLAGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PT+ P IR+D P + T K+ +++ + G+PVLVG
Sbjct: 377 TEEQEFRDIYGLDVVVIPTHKPMIRIDHPDVIYKTEEAKFRAVVEDIVERHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TVSIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AK+
Sbjct: 495 LLGGNPEFIAKR 506
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V +LGGL+VIGT HE+RRIDNQLRGRAGRQGDPG +RF +SL+D++ + F + +
Sbjct: 557 VVKLGGLYVIGTERHEARRIDNQLRGRAGRQGDPGESRFYISLEDDLMRLFG--SERVKN 614
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
L+ + D+D PIE + +Q+ Q E F IRK L+++D+V+ QR+ +Y R+
Sbjct: 615 LMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDIRKHLLQYDDVMNKQREIIYAQRRK 674
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+L G E+ I + ++++++ + K+P W + LL
Sbjct: 675 VLEG--ENLKDSILEMVRSIIERYVEIYTAGSKYPEEWDIKGLL 716
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 767 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIHSI 826
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 827 QEDTVKFL 834
>gi|20807023|ref|NP_622194.1| preprotein translocase subunit SecA [Thermoanaerobacter
tengcongensis MB4]
gi|20515508|gb|AAM23798.1| Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Thermoanaerobacter tengcongensis MB4]
Length = 901
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 285/432 (65%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 83 MKHFKVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M P ER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 143 DWMGKIYEFLGLSVGVILHDMGPAERKKAYAADITYGTNNEFGFDYLRDNMVIYKEDMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISG K Y +A + L + Y V+ K
Sbjct: 203 R---ELNYAIIDEVDSILIDEARTPLIISGVGEKSTDMYKLADRFVRTLKKDEDYVVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+A AE +L D EN + + ALKA +RD Y+V++G+ +I
Sbjct: 260 AKAVSLTEKGVAKAEKFFGIKNLADIENMEISHHIQQALKAHAIMKRDRDYVVKDGQVII 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT Q+ F++Y KL+GMTGTA+
Sbjct: 320 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITLQNYFRMYKKLAGMTGTAQ 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PT+ P IR+D P + T K+ +++ + G+PVLVG
Sbjct: 380 TEEQEFRDIYGLDVVVIPTHKPMIRIDHPDVIYKTEEAKFRAVVEDIVERHKKGQPVLVG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 440 TVSIEKSEKLSAMLKKRGIPHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 497
Query: 397 ILGGNPKMLAKK 408
+LGGNP+ +AK+
Sbjct: 498 LLGGNPEFIAKR 509
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V +LGGL+VIGT HE+RRIDNQLRGRAGRQGDPG +RF +SL+D++ + F + +
Sbjct: 560 VVKLGGLYVIGTERHEARRIDNQLRGRAGRQGDPGESRFYISLEDDLMRLFG--SERVKN 617
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
L+ + D+D PIE + +Q+ Q E F IRK L+++D+V+ QR+ +Y R+
Sbjct: 618 LMDSLGIDDDQPIEHKILTKQIEQAQKKVEGINFDIRKHLLQYDDVMNKQREIIYAQRRK 677
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+L G E+ I + ++++++ + K+P W + LL
Sbjct: 678 VLEG--ENLKDSILEMVRSIIERYVEIYTAGSKYPEEWDIKGLL 719
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W DH+ M++L + +R++G +PL EYK F ++ +
Sbjct: 770 MREIERIVLLRVVDTKWMDHIDEMDQLRQGIGLRAYGQVDPLIEYKKIAFDMFEDLIHSI 829
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 830 QEDTVKFL 837
>gi|379710510|ref|YP_005265715.1| protein translocase subunit secA [Nocardia cyriacigeorgica GUH-2]
gi|374848009|emb|CCF65081.1| Protein translocase subunit secA [Nocardia cyriacigeorgica GUH-2]
Length = 930
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/428 (48%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G+IAEMKT +VT NDYLA+RD+E
Sbjct: 66 KHYKVQIMGGAALHLGNIAEMKTGEGKTLTSVLPAYLNAISGDGVHIVTTNDYLAKRDSE 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG I GM P +RR Y DITY N+E GFDYLRDN+ + E LV R
Sbjct: 126 WMGRVHRFLGLEVGSILSGMTPAQRRLAYNADITYGTNNEFGFDYLRDNMTHSLEDLVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + LHY V++K
Sbjct: 186 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKKDLHYEVDIKK 242
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE Y RD YIVR+G+ +I+
Sbjct: 243 RTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTRDKDYIVRDGEVIIV 302
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++IQ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 303 DEFTGRILVGRRYNEGMHQAIEAKEGVEIQPENQTLATITLQNYFRLYEKLSGMTGTAET 362
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P IR D + T K+ +V G+PVL+G+
Sbjct: 363 EAAELHQIYNLGVIPIPTNKPMIRADQADLIYKTEESKFAAVVDDVVERHEKGQPVLIGT 422
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++GI H+VLNA KY +EAE +A+AGR A+T++TNMAGRGTD++
Sbjct: 423 TSVERSEYLSKQFTKRGIAHSVLNA--KYHEKEAEIIAEAGRPGAVTVATNMAGRGTDVV 480
Query: 398 LGGNPKML 405
LGGNP ++
Sbjct: 481 LGGNPDII 488
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 166/363 (45%), Gaps = 63/363 (17%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
+L L+ + + + +V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +
Sbjct: 510 AWLPTLEQVKAQTAEDADKVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYL 569
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL DE+ ++F+ A+ ++R+ +D+PIE + + + Q E+ F IRK+++
Sbjct: 570 SLGDELMRRFNGAALEAI--MTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVL 627
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---W 688
++DEV+ QR +Y R IL G E Q+ Q ++ ++I VD Y W
Sbjct: 628 KYDEVMNQQRTVIYGERNRILRG--EDMEGQV----QEMITDVITAYVDGATAEGYVEDW 681
Query: 689 SLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFR 748
L+KL + LD + + G+T I E EL ++ D
Sbjct: 682 DLEKLWTALKMLYPVGLD--YKELVGET---GIGEAGELTREELLEALLQDA-------- 728
Query: 749 GIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMK 808
+ KR I D L G R L R+ L +L + +E Y+ Y+K
Sbjct: 729 ----HDAYAKREAEI--DGLAGEGSMR---TLERQVLLQVLDHKW----REHLYEMDYLK 775
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
E + +R+ R+PL EY+ +G F +ML +
Sbjct: 776 E--------------------------GIGLRAMAQRDPLVEYQREGFDMFTAMLDGLKE 809
Query: 869 LTV 871
+V
Sbjct: 810 ESV 812
>gi|433646215|ref|YP_007291217.1| protein translocase subunit secA [Mycobacterium smegmatis JS623]
gi|433295992|gb|AGB21812.1| protein translocase subunit secA [Mycobacterium smegmatis JS623]
Length = 936
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/431 (49%), Positives = 290/431 (67%), Gaps = 29/431 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RDAE
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPSYLNALSGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL+VG+I G+ PEERR++Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLNVGVILSGLTPEERRASYAADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGSSNWYTEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L +L++ N P ++ NA+KAKE ++RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVELVEDQLGIENLYEAANSPLVSYLNNAIKAKELFQRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYEKLSGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVSIPTNKAMIRQDQSDLIYKTEEAKYIAVVDDVSERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ IPHNVLNA KY +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRIPHNVLNA--KYHEQEAGIIAEAGRLGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKK 408
LG N LA K
Sbjct: 493 LGVNVDFLADK 503
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 169/354 (47%), Gaps = 69/354 (19%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ +T + L++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGETLES--LLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y+ R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYEERRLILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDLFAG 711
E+ ++Q + + V+ + G + W L++L LK+ + G
Sbjct: 663 --ENLAEQAHKMLTDVITAYVNGATAE-GYAEDWDLEQLWTALKQLYPV----------G 709
Query: 712 ISGDTLLKS--IEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLT 769
I L+ S + E EL ++ + D G R + K+ I +
Sbjct: 710 IDHHDLIDSDAVGEPGELTREELLDALIAD---------GERAYAEREKQLEEIAGEG-- 758
Query: 770 KNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLIN 829
A L R L ++L + +E Y+ Y+KE
Sbjct: 759 ------AMRQLERNVLLNVLDRKW----REHLYEMDYLKE-------------------- 788
Query: 830 MNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSP 881
+ +R+ R+PL EY+ +G F+ ML + +V L VQ ++P
Sbjct: 789 ------GIGLRAMAQRDPLVEYQREGYDMFVGMLEGLKEESVGFLFNVQVEAAP 836
>gi|189425547|ref|YP_001952724.1| preprotein translocase subunit SecA [Geobacter lovleyi SZ]
gi|226732204|sp|B3E5W3.1|SECA_GEOLS RecName: Full=Protein translocase subunit SecA
gi|189421806|gb|ACD96204.1| preprotein translocase, SecA subunit [Geobacter lovleyi SZ]
Length = 899
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/450 (47%), Positives = 291/450 (64%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMTLHAGKIAEMKTGEGKTLVATLAAYLNAISGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGL+ G+I G+ E+RR+NY DITY N+E GFDYLRDN+ + + V
Sbjct: 141 EWMGRLYGFLGLTTGVIVHGLDDEQRRANYAADITYGTNNEFGFDYLRDNMKFSLDDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R F+FA+VDEVDS+LIDE R PL+ISG + +Y V ++ L QG
Sbjct: 201 R---GFNFAVVDEVDSILIDEARTPLIISGPTEESTDKYYVINQIIPRLEQGEVKEVEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+T++ K S LTE+G++ E L+ +L+D N V AL+A
Sbjct: 258 TLSGKKKVYTGDFTIDEKAKSATLTEQGVSKVEKLLKIENLYDPRNIETLHHVNQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
YRRDV Y+V++G+ LI++E TGR+ RRWS+G+HQAVEAKEG++I++++ +A IT+
Sbjct: 318 AMYRRDVDYVVKDGEVLIVDEFTGRLMPGRRWSDGLHQAVEAKEGVRIESENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE +EF K++++ V +PTN P +R D P + T + K+
Sbjct: 378 QNYFRMYAKLSGMTGTADTEAEEFHKIYKLDVTVIPTNRPLLRPDYPDVIYKTEQEKFAA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+++ + G+P LVG+ S+E SE LS+LL++QGIPH VLNA K +EAE VAQAG
Sbjct: 438 VISDIKEHYEKGQPCLVGTISIEKSEVLSELLRKQGIPHFVLNA--KQHEKEAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
RK AITI+TNMAGRGTDI+LGGNP L K+
Sbjct: 496 RKKAITIATNMAGRGTDIVLGGNPDSLLKQ 525
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 170/367 (46%), Gaps = 75/367 (20%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
++L+ C+ E EV LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SLQ
Sbjct: 540 AMLEQYRQQCAAEHDEVVALGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLQ 599
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F + ++ + +E I I + + Q E + F IRK L+++D
Sbjct: 600 DDLLRIFG--SERVAKIMDFLKIEEGEAITHAMINKSIENAQKKVEAHNFEIRKHLIDYD 657
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW---SLD 691
+V+ QR+ +Y R+ IL G E + + + + +I+ P W SL
Sbjct: 658 DVMNKQREVIYTQRREILAG--EDIRESFLEMLDDTISDIVKAYAFEKDAPLEWDWESLS 715
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
+ + +I ++ ++ A ++ D L K ++E I+
Sbjct: 716 ETVFRCFSIQLELSREMIARLNADGLQKMLQE---------------------QAHESIK 754
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
R++ LGD L+ + VV
Sbjct: 755 RRADE----------------------------LGDELMDHLIRVV-------------- 772
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+++ +D W+DHL+N++ L + +RS+G ++P +EYK + + F+ M+ R TV
Sbjct: 773 ---MLQAIDVHWKDHLLNIDHLKEGIGLRSYGQKDPKQEYKKEAYQLFMEMIIRIREETV 829
Query: 872 ESLVQYW 878
E + +W
Sbjct: 830 EKV--FW 834
>gi|359770245|ref|ZP_09273729.1| protein translocase subunit SecA [Gordonia effusa NBRC 100432]
gi|359312602|dbj|GAB16507.1| protein translocase subunit SecA [Gordonia effusa NBRC 100432]
Length = 930
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 289/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 66 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P+ RR Y DITY N+E GFDYLRDN+A + E+LV R
Sbjct: 126 WMGRVHRFLGLETAVILTGMSPDARRVAYAADITYGTNNEFGFDYLRDNMAHSLEELVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F IVDEVDS+LIDE R PL+ISG A Y A++A +L + HY V++K
Sbjct: 186 G---HNFGIVDEVDSILIDEARTPLIISGPAEGSSKWYTEFARLAPMLKRDEHYEVDIKK 242
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+AL E L ++L++ N ++ NA+K KE ++RD YIVR G+ LI+
Sbjct: 243 KTIGVHEAGVALVEDQLGIDNLYEASNSQLVSYLNNAIKVKELFQRDKDYIVRKGEVLIV 302
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL GMTGTA+T
Sbjct: 303 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLGGMTGTAET 362
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K++ ++ G+PVL+G+
Sbjct: 363 EAAEFDQIYKLGVLPIPTNKPMIRKDQSDLIYKTEEAKFDAVVDDITERHEKGQPVLIGT 422
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L+++GIPH VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 423 TSVERSEYLSRQLERRGIPHTVLNA--KFHEQEAQIIAEAGRTGAVTVATNMAGRGTDVV 480
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 481 LGGNPDIIA 489
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ ++E V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++
Sbjct: 521 NAADEAEAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR-- 578
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
F+ + +++R+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 579 FNGAALESIMNRVNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRK 638
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R+++L G E +Q+ Q + VV + G + + + W LD+L
Sbjct: 639 IIYGERRTLLEG--EDHGEQVQQMIDDVVGAYVDGATE-IGYAEDWDLDEL 686
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D ++++ER++L+ LD WRDHL M+ L +++RS ++P+ EY+ +G F SML
Sbjct: 745 DGAIRQLERSILMSVLDRKWRDHLYEMDYLREGIHLRSMAQQDPVVEYQREGFDMFSSML 804
Query: 864 SATRRLTV 871
+ T+
Sbjct: 805 EGLKEETL 812
>gi|402310302|ref|ZP_10829268.1| preprotein translocase, SecA subunit [Eubacterium sp. AS15]
gi|400368754|gb|EJP21761.1| preprotein translocase, SecA subunit [Eubacterium sp. AS15]
Length = 893
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 287/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 76 MRHFDVQLMGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVITVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGLS G+I G+ EERR YR DITY N+E GFDYLRDN+ EQ+V
Sbjct: 136 EQMSKLYGFLGLSTGVIVHGLKDEERRQAYRADITYGTNNEFGFDYLRDNMVTYKEQMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+ K Y A + L + +TV+ K
Sbjct: 196 R---NLNYAIVDEVDSILIDEARTPLIISGQGDKSTKLYSQADTFIKTLNKETDFTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LT+EG+ A+ +L D +N + AL+A + DV Y+V++G+ +I
Sbjct: 253 ENASSLTDEGLEKAQKFFGVENLTDIDNMELYHNINQALRANTLMKLDVDYVVKDGEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 313 VDEFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYSKLSGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V+++PTN P R DL + + GK+ QE++ +G+PVLVG
Sbjct: 373 TEEEEFRAIYRMDVVQIPTNKPIRRDDLNDSVYKSEDGKFRAVIQEIKERHSVGQPVLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS++LK++GI H VLNA K +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 433 TISIENSEKLSNMLKREGIQHEVLNA--KNHKKEAEIVAQAGRFGQVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ +A++
Sbjct: 491 ILGGNPEFMAER 502
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL ++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F + A ++ +
Sbjct: 557 GGLCIVGTERHESRRIDNQLRGRSGRQGDPGASKFFISLEDDLMRLFGSEKMQA--MVDK 614
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ D+D PIE + + + Q E FGIRK ++E+D+V+ QR+ +Y R+ +L G
Sbjct: 615 LGMDDDTPIEAGILSKSIENAQKKVEGKNFGIRKYVLEYDDVMNKQREIIYKERRKVLEG 674
Query: 655 AN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
N E S+ I + +Q V+D+ I N + W+ D +
Sbjct: 675 QNIKEEISEMIKKQIQKVIDKTIPDNTTADE----WNFDNI 711
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%)
Query: 790 IASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLE 849
IA+ + +E+ +V M+EVER +L++ +D W DH+ M++L + +R+ G NP+
Sbjct: 743 IANEKYLEKENTIGEVNMREVERMILLQVVDSKWMDHIDAMDQLKQGIGLRAIGQDNPVR 802
Query: 850 EYKIDGCRFFISMLSATRRLTVESLVQY 877
Y+I+G F M+ + + TV L +
Sbjct: 803 AYQIEGFDMFDQMIDSIQEDTVSYLFGF 830
>gi|383784941|ref|YP_005469511.1| Preprotein translocase subunit SecA [Leptospirillum ferrooxidans
C2-3]
gi|383083854|dbj|BAM07381.1| preprotein translocase, SecA subunit [Leptospirillum ferrooxidans
C2-3]
Length = 911
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/436 (47%), Positives = 286/436 (65%), Gaps = 29/436 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFD Q+IGG VLH+G IAEMKT V+TVNDYLA+RD+
Sbjct: 81 MRHFDSQLIGGIVLHEGKIAEMKTGEGKTLVATLPVYLNALEGKGVHVITVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGL+ G++Q + +R++ Y D+TY N+E GFDYLRDN+ + + V
Sbjct: 141 EWMGHLYHFLGLTTGIVQHDIEDVDRKAAYAADVTYGTNNEFGFDYLRDNMKYDLSEFVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFAIVDEVDS+LIDE R PL+ISG+A + Y ++ + L + LH+ V+ K
Sbjct: 201 RG---LHFAIVDEVDSILIDEARTPLIISGQAEESTDMYVKVDRIMKHLKKDLHFKVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
S LT+EG E L ++L+D N+ W V+ ALKA YRRDV+Y+V+NG+ +I
Sbjct: 258 LKSATLTDEGNNAVEELLGIHNLYDVNNISWFHHVLQALKAHHVYRRDVEYVVKNGEVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRW EG+HQAVEAKE + IQ ++ +A +T+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRWGEGLHQAVEAKEKVAIQMENQTLATVTFQNFFRMYGKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ VPTN IR DLP Q + T R K +++ + + G+P+LVG
Sbjct: 378 TEATEFHKIYGLDVVVVPTNRKMIRHDLPDQIYRTNREKNNAIVEDILARHKTGQPILVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE+L+ LL++ IPHNVLNA K+ EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSEHLASLLREANIPHNVLNA--KFHELEAEIVAQAGRLGMVTIATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIED 412
+LGGN + L K + D
Sbjct: 496 LLGGNSEFLLKARVSD 511
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 71/346 (20%)
Query: 519 DCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMF 578
D ++H E V GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++
Sbjct: 532 DKDLHSEKEA--VMAAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLL 589
Query: 579 QKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLE 638
+ F + L+ R+ ++ +PIE + + + Q E Y+F IRK L+E+D+V+
Sbjct: 590 RIFGAERIKG--LMERMGVEDGVPIEHGFVSKAIENAQKKVENYHFDIRKQLIEYDDVMN 647
Query: 639 VQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFI 698
QR Y++R+ L G E S++++++ + ++ DKLL
Sbjct: 648 QQRLIFYEMRKKTLKG--EDLSERLYEWAETII-------------------DKLLM--- 683
Query: 699 AIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLK 758
+FA PE +P+ P L G++ K+
Sbjct: 684 ---------IFA--------------PEDQ--------YPETWDLPGLCEGVQEKTG--- 709
Query: 759 RWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKT 818
+ I + + G LL K+ D L +ES + + R +++
Sbjct: 710 --MTINPESIRDLGIDALRNELLEKHQ-DFLKE------KESLFGSEAFWSIVRYFVLQN 760
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
LD W++HL+NM+ L + +R +G ++PL EY+ +G F S ++
Sbjct: 761 LDSLWKEHLLNMDHLKEGIGLRGYGQKDPLVEYRREGFDLFESFIA 806
>gi|148263851|ref|YP_001230557.1| preprotein translocase subunit SecA [Geobacter uraniireducens Rf4]
gi|189046167|sp|A5GEX9.1|SECA_GEOUR RecName: Full=Protein translocase subunit SecA
gi|146397351|gb|ABQ25984.1| protein translocase subunit secA [Geobacter uraniireducens Rf4]
Length = 894
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 288/450 (64%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT V+TVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHQGKIAEMKTGEGKTLVATLPSYLNALTGRGVHVITVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+H FLGLSVG+I G+ +ERR Y DITY N+E GFDYLRDN+ + + V
Sbjct: 141 EWMGRIHSFLGLSVGVIIHGLDDDERREAYNADITYGTNNEFGFDYLRDNMKFSLDDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R FH++IVDEVDS+LIDE R PL+ISG +Y + ++ LL +G
Sbjct: 201 R---DFHYSIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPLLKKGEVLEEEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+TV+ K+ S LTEEG+ E L+ ++L+D N V AL+A
Sbjct: 258 TLSGKRKRYTGDFTVDEKSKSATLTEEGVLKVEKLLKVDNLYDPRNMETLHHVNQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
++ DV Y+V+ G+ LI++E TGR+ RRWS+G+HQA+EAKEG+KI+ ++ +A IT+
Sbjct: 318 ALFKLDVDYVVKEGEVLIVDEFTGRLMPGRRWSDGLHQAIEAKEGVKIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE +EF K++++ V+ +PTN +R D P + T K+
Sbjct: 378 QNYFRMYEKLSGMTGTADTEAEEFHKIYKLDVVVIPTNRVLLRPDFPDVIYKTEGEKFNA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+E+ + G+PVLVG+ S+E SE LS+LLK+QGIPHNVLNA K REAE VAQ G
Sbjct: 438 VIEEIRELHAKGQPVLVGTISIEKSEVLSELLKRQGIPHNVLNA--KQHEREAEIVAQGG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
RK ITI+TNMAGRGTDI+LGGN +AK+
Sbjct: 496 RKGMITIATNMAGRGTDILLGGNADAMAKQ 525
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y VL + C+NE EV +LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 538 YERVLAQFKEQCANEHDEVVKLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLS 597
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
LQD++ + F + ++ + +E I I + + Q E + F IRK L+E
Sbjct: 598 LQDDLLRIFG--SERVAKIMDMLKIEEGEAITHGLITKAIENAQRKVEAHNFEIRKHLIE 655
Query: 633 FDEVLEVQRKHVYDLRQSILTG 654
+D+V+ QR+ +Y R+ IL G
Sbjct: 656 YDDVMNKQREVIYAQRREILAG 677
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ + D M + + ++++++D W+DHL++++ L + +R +G ++P +EYK + + F
Sbjct: 758 AEFGDELMDHLIKVIMLQSIDTQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKKEAYQLF 817
Query: 860 ISMLSATRRLTVESLVQYW 878
+ M+ TR VE + +W
Sbjct: 818 MDMMLRTREEVVEKI--FW 834
>gi|338814371|ref|ZP_08626392.1| preprotein translocase subunit SecA [Acetonema longum DSM 6540]
gi|337273693|gb|EGO62309.1| preprotein translocase subunit SecA [Acetonema longum DSM 6540]
Length = 836
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/435 (49%), Positives = 288/435 (66%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA+RD+
Sbjct: 82 MRHFDVQLLGGITLHEGNIAEMRTGEGKTLAATLPVYLNALNGQGVHVVTVNDYLARRDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGLSVGLI G+ ER+ Y D+TY N+E GFDYLRDN+ + EQ+V
Sbjct: 142 EWMGKVYRFLGLSVGLIVHGLDFAERKMAYSADVTYGTNNEFGFDYLRDNMVIHPEQMVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+L+DE R PL+ISG K Y V AKV L G YT++ K
Sbjct: 202 R---ELNYAIVDEVDSILVDEARTPLIISGPGEKSTDLYYVLAKVVPKLKAGEDYTIDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+V TE GIA AE L +L+ DEN + AL+A RD Y+V++ + +I
Sbjct: 259 ANTVAPTESGIAKAEKHLNVRNLYEDENIELSHHFNQALRAHALMHRDKDYVVKDDQVII 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 319 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLASITFQNYFRMYSKLAGMTGTAK 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN IR DLP + T R K+ A +E+ + G+PVLVG
Sbjct: 379 TEEEEFRKIYGLDVVVIPTNQNVIREDLPDVIYKTKRAKYRAAVREIAERYAKGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LS LK+ G+ HNVLNA KY EA+ VAQAG+K A+TI+TNMAGRGTDI
Sbjct: 439 TTSIAQSEELSAALKRNGVSHNVLNA--KYHEMEAQIVAQAGQKGAVTIATNMAGRGTDI 496
Query: 397 ILG-GNPKMLAKKII 410
+LG G P + I+
Sbjct: 497 VLGEGVPALGGLHIV 511
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 164/336 (48%), Gaps = 67/336 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGSTRF +SL+D++ + F D
Sbjct: 499 GEGVPALGGLHIVGTERHESRRIDNQLRGRSGRQGDPGSTRFYLSLEDDLMRLFGSDNIA 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 559 SI--MDRLGMEEDEPIEHSLITRSIEQAQKKVEARNFDIRKQVLEYDDVMNQQREVIYSQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L G E+ + IF ++ ++ + + + +P W D L++
Sbjct: 617 RRKVLMG--ENMREHIFPMIETIIHQGMDLYCEEKVYPEDWDYDSLIEY----------- 663
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+FY P+ SL R +D
Sbjct: 664 ------------------------CEDFYAPE---------------GSLVR------ED 678
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
LT+ R +LL + +Y N +E + M+E+E+ V++K +D W DHL
Sbjct: 679 LTEFSRIEVYEHLLA-----VAETAYDN--REKVFGSENMRELEKVVMLKVVDGKWMDHL 731
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
M+ L + +R++G +NPL EYKI+ F M+
Sbjct: 732 DAMDMLRQGIGLRAYGQKNPLIEYKIEAYDMFQQMI 767
>gi|108798324|ref|YP_638521.1| preprotein translocase subunit SecA [Mycobacterium sp. MCS]
gi|119867421|ref|YP_937373.1| preprotein translocase subunit SecA [Mycobacterium sp. KMS]
gi|123369601|sp|Q1BCB9.1|SECA1_MYCSS RecName: Full=Protein translocase subunit SecA 1
gi|167016613|sp|A1UCM5.1|SECA1_MYCSK RecName: Full=Protein translocase subunit SecA 1
gi|108768743|gb|ABG07465.1| protein translocase subunit secA [Mycobacterium sp. MCS]
gi|119693510|gb|ABL90583.1| protein translocase subunit secA [Mycobacterium sp. KMS]
Length = 947
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 290/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RDAE
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I G+ P+ERR+ Y DITY N+E GFDYLRDN+A E V R
Sbjct: 138 WMGRVHRFLGLDVGVILSGLTPDERRAAYHADITYGTNNEFGFDYLRDNMAHRLEDRVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAVVDEVDSILIDEARTPLIISGPADAASNWYSEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L +L++ N P ++ NALKAKE ++RD YIVRNG+ LI+
Sbjct: 255 RTVGVHEVGVEFVEDQLGIENLYEAANSPLVSYLNNALKAKELFQRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLLGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRDMIRQDQTDLIYKTEEAKFIAVVDDVYERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSKQFTKRKIPHNVLNA--KYHEQEANIIAEAGRLGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA K + ++ L
Sbjct: 493 LGGNVDFLADKRLREQGL 510
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 5/179 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L + E +V+ +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 525 STLNQIKAEAEEEADDVRAVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 584
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++F+ T A L++R+ +D+PIE + R + Q E+ F +RK+++++D
Sbjct: 585 DELMRRFNGATLEA--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYD 642
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
EV+ QRK +Y+ R+ IL G E ++Q + + VV + G + W L++L
Sbjct: 643 EVMNQQRKVIYEERRRILEG--EDLAEQAHKMLVDVVTAYVNGAT-AEGYAEDWDLEQL 698
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML A
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEAL 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|306820780|ref|ZP_07454405.1| preprotein translocase subunit SecA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551170|gb|EFM39136.1| preprotein translocase subunit SecA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 893
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 287/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 76 MRHFDVQLMGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVITVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGLS G+I G+ EERR YR DITY N+E GFDYLRDN+ EQ+V
Sbjct: 136 EQMSKLYGFLGLSTGVIVHGLKDEERRQAYRADITYGTNNEFGFDYLRDNMVTYKEQMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+ K Y A + L + +TV+ K
Sbjct: 196 R---NLNYAIVDEVDSILIDEARTPLIISGQGDKSTKLYSQADTFIKTLNKETDFTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LT+EG+ A+ +L D +N + AL+A + DV Y+V++G+ +I
Sbjct: 253 ENASSLTDEGLEKAQKFFGVENLTDIDNMELYHNINQALRANTLMKLDVDYVVKDGEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 313 VDEFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYSKLSGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V+++PTN P R DL + + GK+ QE++ +G+PVLVG
Sbjct: 373 TEEEEFRAIYRMDVVQIPTNKPIRRDDLNDSVYKSEDGKFRAVIQEIKERHSVGQPVLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS++LK++GI H VLNA K +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 433 TISIENSEKLSNMLKREGIQHEVLNA--KNHKKEAEIVAQAGRFGQVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ +A++
Sbjct: 491 ILGGNPEFMAER 502
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL ++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F + A ++ +
Sbjct: 557 GGLCIVGTERHESRRIDNQLRGRSGRQGDPGASKFFISLEDDLMRLFGSEKMQA--MVDK 614
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ D+D PIE + + + Q E FGIRK ++E+D+V+ QR+ +Y R+ +L G
Sbjct: 615 LGMDDDTPIEAGILSKSIENAQKKVEGKNFGIRKYVLEYDDVMNKQREIIYKERRKVLEG 674
Query: 655 AN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
N E S+ I + +Q V+D+ I N + W+ D +
Sbjct: 675 QNIKEEISEMIKKQIQKVIDKTIPDNTTADE----WNFDNI 711
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%)
Query: 790 IASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLE 849
IA+ + +E+ +V M+EVER +L++ +D W DH+ M++L + +R+ G NP+
Sbjct: 743 IANEKYLEKENTIGEVNMREVERMILLQVVDSKWMDHIDAMDQLKQGIGLRAIGQDNPVR 802
Query: 850 EYKIDGCRFFISMLSATRRLTVESLVQY 877
Y+I+G F M+ + + TV L +
Sbjct: 803 AYQIEGFDMFDQMIDSIQEDTVSYLFGF 830
>gi|363893324|ref|ZP_09320461.1| preprotein translocase, SecA subunit [Eubacteriaceae bacterium CM2]
gi|402838489|ref|ZP_10886996.1| preprotein translocase, SecA subunit [Eubacteriaceae bacterium
OBRC8]
gi|361961422|gb|EHL14623.1| preprotein translocase, SecA subunit [Eubacteriaceae bacterium CM2]
gi|402272966|gb|EJU22177.1| preprotein translocase, SecA subunit [Eubacteriaceae bacterium
OBRC8]
Length = 897
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 286/432 (66%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 76 MRHFDVQLMGGMVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVITVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ +RR++Y DITY N+E GFDYLRDN+ E +V
Sbjct: 136 EWMSKLYGFLGLTTGVIVHGLKDAQRRASYMADITYGTNNEFGFDYLRDNMVTYKENMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+ K Y A + L + YTV+ K
Sbjct: 196 R---ELNYAIVDEVDSILIDEARTPLIISGQGDKSTTLYSQADTFIKTLNKETDYTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LT+EG+ A+ +L D +N + AL+A +RDV Y+V++G+ +I
Sbjct: 253 ENASSLTDEGLEKAQKFFNIENLTDLDNIELYHNINQALRANTLMKRDVDYVVKDGEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y K+SGMTGTAK
Sbjct: 313 VDDFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYNKISGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V+++PTN P R DL + + GK+ +E++ G+PVLVG
Sbjct: 373 TEEEEFRAIYRMDVVQIPTNRPIQRKDLNDSVYKSENGKFRAVIEEIKEHHAKGQPVLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS +LK+QGI H VLNA K +EAE VAQAGR +TI+TNMAGRGTDI
Sbjct: 433 TISIENSEKLSSMLKKQGIEHEVLNA--KNHKKEAEIVAQAGRFGQVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LA++
Sbjct: 491 ILGGNPEFLAER 502
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ + F + + ++
Sbjct: 557 GGLCIIGTERHESRRIDNQLRGRSGRQGDPGVSKFFISLEDELMRLFGSEKMQS--MVES 614
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ D+D PIE + + + G Q E FGIRK ++E+D+V+ QR +YD R+ +L G
Sbjct: 615 LGMDDDTPIEAGILSKSIEGAQKKVEGKNFGIRKHVLEYDDVMNKQRTIIYDERRRVLEG 674
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
E+ ++I + ++ V ++I N + P W +++
Sbjct: 675 --ENIKEEIVEMIKKQVQKVIDKNTGDSQDPEEWDYNEI 711
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 774 YRATTNLLRKYLGD--ILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMN 831
++A L ++ L D I +A + +E++ M+E+ER +L++ +D W DH+ M+
Sbjct: 727 FKAEDKLEKQDLYDKAIEVAENRYMQKEAQIGSDTMREIERMILLQMVDTKWMDHIDAMD 786
Query: 832 RLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+L + +R+ G NP+ Y+I+G F +M+ + + TVE + + P
Sbjct: 787 QLKQGIGLRAIGQDNPVRAYQIEGFDMFDAMVESIQEDTVEYVYGFELKP 836
>gi|452946063|gb|EME51564.1| preprotein translocase subunit SecA [Rhodococcus ruber BKS 20-38]
Length = 947
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 287/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYPVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIADEGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR LGL +I G+ P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 140 WMGRVHRSLGLETAVILSGLTPAERRTAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKKDVHYEVDIKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y+RD YIVR+G+ +I+
Sbjct: 257 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYQRDKDYIVRDGEVIIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRILVGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN P +RVD + T K+ +V G+PVL+G+
Sbjct: 377 EAAELHQIYELGVIPIPTNKPMVRVDQGDLIYKTETAKFAAVVDDVAERHAKGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++GIPHNVLNA K+ +EA +A+AGR A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSAQFTKRGIPHNVLNA--KFHEQEATIIAEAGRSGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 495 LGGNPDILA 503
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 162/350 (46%), Gaps = 68/350 (19%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
+ +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ +
Sbjct: 539 DADKVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGA 596
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+++R+ +D+PIE + + + Q E+ F IRK+++++DEV+ QR +YD
Sbjct: 597 ALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDEVMNQQRTVIYD 656
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGK 703
R+ IL G E Q+ + ++ +++ VD Y W L++L +
Sbjct: 657 ERRRILRG--EDLEGQV----EHMITDVVTAYVDGATADGYVEDWDLEQLWTALRTLYPV 710
Query: 704 ILD--DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL 761
LD +L G+ S EEL E D + Y RR++
Sbjct: 711 GLDHKELATSTDGEPADLSREELREALLKDAHAAY-------------ARREAE------ 751
Query: 762 AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDC 821
D + G R L R+ L +L + +E Y+ Y+KE
Sbjct: 752 ---IDAIAGEGGMR---ELERRVLLSVLDRKW----REHLYEMDYLKE------------ 789
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ R+PL EY+ +G F+ ML + +V
Sbjct: 790 --------------GIGLRAMAQRDPLVEYQREGYDMFVGMLEGLKEESV 825
>gi|260881506|ref|ZP_05404570.2| preprotein translocase, SecA subunit [Mitsuokella multacida DSM
20544]
gi|260848612|gb|EEX68619.1| preprotein translocase, SecA subunit [Mitsuokella multacida DSM
20544]
Length = 882
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 286/429 (66%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGMCLHEGRIAEMRTGEGKTLVATLPVYLNALTGEGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++R+LGL+VGL+ M ER+ Y D+T+ N+E GFDYLRDN+ EQ+V
Sbjct: 143 EDMGRLYRYLGLTVGLVVHDMDFPERKFAYSRDVTFGTNNEFGFDYLRDNMVIYPEQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V AK L +G+ YTV+ K
Sbjct: 203 R---KLHYAIVDEVDSILIDEARTPLIISGPGAKSTDMYAVMAKAVSGLKEGIDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + I E L N+L+ EN + AL+AK +RD Y+VRNG+ +I
Sbjct: 260 QKTVAPADNTIPKVEKILGINNLYAPENIELSHCFTAALRAKALMKRDRDYVVRNGEIII 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLATITFQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++ +PVI VPTN P IR D P F T R K++ + V S+ G+PVL+G
Sbjct: 380 TEEDEFLKIYNLPVIVVPTNKPVIRKDYPDLIFKTKRAKYKAVGRAVTSLHAKGQPVLIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LS +L++ GIPHNVLNA K+ +EAE +A AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEELSAILRKNGIPHNVLNA--KFHEKEAEIIAGAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 498 KLGEGVPEL 506
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 15/206 (7%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F+ D
Sbjct: 500 GEGVPELGGLFIIGTERHESRRIDNQLRGRAGRQGDPGASRFYLSLEDDLLRLFASDRIS 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ DED PIE I + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDKLGMDEDEPIEHKLITNSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVMYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK----HPRYWSLDKLLKE---FIAI 700
R+ IL G N + + + +V II +D +P W LD L+++ A
Sbjct: 618 RRKILFGEN------LRENIMGMVKHIIRAEMDQYANAQLYPEEWQLDGLIEDAEKIYAP 671
Query: 701 AGKILDDLFAGISGDTLLKSIEELPE 726
G++ + A +S D L + +E+L E
Sbjct: 672 QGRLKKEELAAMSRDELQECLEKLAE 697
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
M+E+E+ V+++ +D W +HL +M+ L +N+R++G RNPL EYKI+ F M
Sbjct: 712 MRELEKVVMLRVVDKKWMEHLDHMDMLRDGINLRAYGQRNPLVEYKIEALDMFEEM 767
>gi|126433989|ref|YP_001069680.1| preprotein translocase subunit SecA [Mycobacterium sp. JLS]
gi|167016612|sp|A3PWB2.1|SECA1_MYCSJ RecName: Full=Protein translocase subunit SecA 1
gi|126233789|gb|ABN97189.1| protein translocase subunit secA [Mycobacterium sp. JLS]
Length = 947
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 290/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RDAE
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I G+ P+ERR+ Y DITY N+E GFDYLRDN+A E V R
Sbjct: 138 WMGRVHRFLGLDVGVILSGLTPDERRAAYHADITYGTNNEFGFDYLRDNMAHRLEDRVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAVVDEVDSILIDEARTPLIISGPADAASNWYSEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L +L++ N P ++ NALKAKE ++RD YIVRNG+ LI+
Sbjct: 255 RTVGVHEVGVEFVEDQLGIENLYEAANSPLVSYLNNALKAKELFQRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLLGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRDMIRQDQTDLIYKTEEAKFIAVVDDVYERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSKQFTKRKIPHNVLNA--KYHEQEANIIAEAGRLGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA K + ++ L
Sbjct: 493 LGGNVDFLADKRLREQGL 510
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 5/179 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L + E +V+ +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 525 STLNQIKAEAEEEADDVRAVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 584
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++F+ T A L++R+ +D+PIE + R + Q E+ F +RK+++++D
Sbjct: 585 DELMRRFNGATLEA--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYD 642
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
EV+ QRK +Y+ R+ IL G E ++Q + + VV + G + W L++L
Sbjct: 643 EVMNQQRKVIYEERRRILEG--EDLAEQAHKMLVDVVTAYVNGAT-AEGYAEDWDLEQL 698
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F+ ML A
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEAL 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|374612208|ref|ZP_09684988.1| preprotein translocase, SecA subunit [Mycobacterium tusciae JS617]
gi|373547921|gb|EHP74629.1| preprotein translocase, SecA subunit [Mycobacterium tusciae JS617]
Length = 951
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RDAE
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNALAGDGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I G+ P+ERR Y DITY N+E GFDYLRDN+A + E LV R
Sbjct: 138 WMGRVHRFLGLEVGVILSGLTPDERRVAYGADITYGTNNEFGFDYLRDNMAHSLEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+++
Sbjct: 198 G---HNYAIVDEVDSILIDEARTPLIISGPADGASNWYSEFARLAPLMEKDVHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ +I+
Sbjct: 255 RTIGVHEIGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVRDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLVGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EASELHEIYKLGVVSIPTNKSMIRADQSDLIYKTEEAKYIAVVDDVSERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEANIIAEAGRLRAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN LA K + D+ L
Sbjct: 493 LGGNVDFLADKKLRDQGL 510
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L + + E V +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 LLPQVKAEAAEEAKNVIAVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T + L++R+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 586 ELMRRFNGATLES--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFEVRKNVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
V+ QR +YD R+ IL G E+ + Q + + VV + G + W L++L
Sbjct: 644 VMNKQRMVIYDERRRILEG--ENLADQAHKMLVDVVTAYVNGATAE-GYSEDWDLEQL 698
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G FI ML
Sbjct: 760 MRQLERNVLLNVVDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFIGMLEGM 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|397670221|ref|YP_006511756.1| Preprotein translocase subunit SecA [Propionibacterium propionicum
F0230a]
gi|395142625|gb|AFN46732.1| preprotein translocase, SecA subunit [Propionibacterium propionicum
F0230a]
Length = 922
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 284/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+IAEMKT +VT NDYLA+ +E
Sbjct: 80 RHFDVQIMGGAALHWGNIAEMKTGEGKTLVGTLPSYLNALSGDGVHIVTTNDYLAKYQSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+H FLGL VG+I M P ERR Y+ DITY N+E GFDYLRDN+A NSE LV R
Sbjct: 140 QMGRIHHFLGLEVGVILASMSPAERRIAYQADITYGTNNEFGFDYLRDNMALNSEDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFAIVDEVDS+LIDE R PL+ISG A YPV A++ + + HY V+ K
Sbjct: 200 G---HHFAIVDEVDSILIDEARTPLIISGPAQDTHEWYPVFARMVRSMKRDQHYEVDEKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V ++ GI + E L ++L++ N P ++ NA+KAKE ++RD Y+V + LI+
Sbjct: 257 RTVAISGAGIEVVEDRLGIDNLYESANTPLISYLNNAIKAKELFKRDKDYVVLGDEILIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RR++EG+HQA+EAKEG+KI+ + +A +T Q+ F++Y KL+GMTGTAKT
Sbjct: 317 DEHTGRTLAGRRYNEGLHQALEAKEGVKIKDEYQTLATVTLQNYFRMYDKLAGMTGTAKT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + VI +PTN+P IR+D + + T K++ ++V G+PVL+G+
Sbjct: 377 EESEFQKIYGLGVIPIPTNMPMIRIDQRDRIYRTEEAKYKAIIEDVVLRHEDGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SV SE LS +LK++GIPH VLNA K REA VAQAGRK A+T+STNMAGRGTDI+
Sbjct: 437 ASVAKSELLSGMLKKEGIPHEVLNA--KQHEREAAVVAQAGRKGAVTVSTNMAGRGTDIM 494
Query: 398 LGGNPKMLA 406
LGGNP+ LA
Sbjct: 495 LGGNPEFLA 503
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
LK E E EV GGL+VIG+ HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 528 TLKALEEQVEAEHDEVVEAGGLYVIGSERHESRRIDNQLRGRSGRQGDPGESRFYLSLSD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F + ++ ++ + D+PI+ ++ + Q E F +RK+++++D+
Sbjct: 588 DLMRLFRPEVLERALIMLKVPD--DVPIDSKSVSNAIESAQKQVESQNFEMRKNVLKYDD 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQI 663
V+ QR +Y R+ +L GA+ S+Q+
Sbjct: 646 VMNRQRHVIYRDRRRVLDGAD--LSEQL 671
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G FI+M A+
Sbjct: 750 MRELERQVLLSVVDRNWREHLYEMDYLREGIGLRAMAQRDPLVEYQREGGDMFIAMREAS 809
>gi|260424648|ref|ZP_05732804.2| preprotein translocase, SecA subunit [Dialister invisus DSM 15470]
gi|260402684|gb|EEW96231.1| preprotein translocase, SecA subunit [Dialister invisus DSM 15470]
Length = 827
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/423 (48%), Positives = 286/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ+IGG +LH G+IAEM T V+TVNDYLA+RD+
Sbjct: 95 MRQFDVQLIGGIILHRGNIAEMGTGEGKTLVATAPVYLNALEGKGAHVITVNDYLAKRDS 154
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V++FLGLSVGLI + E+R+ Y DITY N+E GFDYLRDN+ ++ +Q+V
Sbjct: 155 EWMGQVYKFLGLSVGLIVHDLDFEQRKIAYNSDITYGTNNEFGFDYLRDNMVSSLDQMVQ 214
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ ++DEVDS+LIDE R PL+ISG K Y V +K+ L G YT++ K
Sbjct: 215 R---PLHYCLIDEVDSILIDEARTPLIISGPGQKSTDNYYVMSKLVPQLKLGEDYTIDEK 271
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE G++ E L+ ++L+D +N + AL+A+ RD Y+V++G+ +I
Sbjct: 272 QKTVAPTEAGVSKMEKMLKVDNLYDTDNLELNHLFVQALRAQAMMERDRDYVVKDGEVVI 331
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL++Q +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 332 VDEFTGRLMYGRRYSDGLHQAIEAKEGLQVQRESQTLATITFQNYFRMYDKLAGMTGTAK 391
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ + V +VPTN P R DLP F T RGK+ +E+E G+P+L+G
Sbjct: 392 TEEQEFIKIYGLEVFQVPTNRPVQRKDLPDVIFKTKRGKYRAVVREIERRHATGQPMLIG 451
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK+ GI HNVLNA KY EA+ VAQAG+K +TI+TNMAGRGTDI
Sbjct: 452 TTSIEQSEQLSHMLKEAGIVHNVLNA--KYHELEAQIVAQAGQKGQVTIATNMAGRGTDI 509
Query: 397 ILG 399
+LG
Sbjct: 510 VLG 512
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 512 GEGVSELGGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLLRIFGGDN-- 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ +ED I + + Q E+ F IRK ++E+D+V+ QRK VY+
Sbjct: 570 IKKFMEKMGLEEDEEIRSSMVSSAIQKAQKRVEERNFDIRKYVLEYDDVMNQQRKVVYEQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ IL G + QI + +++ + +P +P W D L+K
Sbjct: 630 RRKILEG--QDMKDQILNMVDMLINHGLETYANPKLYPEEWDFDALIK 675
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E+AV++K +D W +HL +M+ L + +RS+G RNP+ EYK++ F M +
Sbjct: 724 MRELEKAVMLKVVDSKWMEHLDDMDMLKEGIGLRSYGQRNPIVEYKVEAFNIFSEMQQS- 782
Query: 867 RRLTVESLVQY 877
+E+++ Y
Sbjct: 783 ---MIETIILY 790
>gi|312140670|ref|YP_004008006.1| preprotein translocase seca [Rhodococcus equi 103S]
gi|325675700|ref|ZP_08155384.1| preprotein translocase subunit SecA [Rhodococcus equi ATCC 33707]
gi|311890009|emb|CBH49327.1| preprotein translocase SecA [Rhodococcus equi 103S]
gi|325553671|gb|EGD23349.1| preprotein translocase subunit SecA [Rhodococcus equi ATCC 33707]
Length = 929
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 288/433 (66%), Gaps = 29/433 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 66 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDSE 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL V +I GM P +RR Y DITY N+E GFDYLRDN+ + LV R
Sbjct: 126 WMGRVHRFLGLEVDVILSGMTPAQRRKAYAADITYGTNNEFGFDYLRDNMTHTLDDLVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 186 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYGEFARIAPLLKRDVHYEVDIKK 242
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE Y+RD YIVR+G+ +I+
Sbjct: 243 RTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYQRDKDYIVRDGEVIIV 302
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 303 DEFTGRILVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 362
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + + + VI +PTN P IRVD + T K++ +V + G+PVL+G+
Sbjct: 363 EAAELHQTYGLGVIPIPTNRPLIRVDNGDLIYKTEEAKFDAVVDDVVERHQKGQPVLIGT 422
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ H+VLNA K+ +EA VA+AGR A+T++TNMAGRGTD++
Sbjct: 423 TSVERSEYLSKQFTKRGVAHSVLNA--KFHEQEATIVAEAGRSGAVTVATNMAGRGTDVV 480
Query: 398 LGGNPKMLAKKII 410
LGGNP ++A ++
Sbjct: 481 LGGNPDIIADLVL 493
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 109/182 (59%), Gaps = 11/182 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
VL+ + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 513 GVLEKVKDEVKADAEKVRAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 572
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++D
Sbjct: 573 DELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYD 630
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLD 691
EV+ QR +YD R+ IL G N + +++++ ++I V+ Y W L+
Sbjct: 631 EVMNQQRTVIYDERRRILEGEN------LEGQVESMITDVITAYVNGAASEGYVEDWDLE 684
Query: 692 KL 693
+L
Sbjct: 685 QL 686
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML
Sbjct: 747 MRELERRVMLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFTGMLEGL 806
Query: 867 RRLTV 871
+ +V
Sbjct: 807 KEESV 811
>gi|421052305|ref|ZP_15515296.1| preprotein translocase, SecA subunit [Pelosinus fermentans B4]
gi|392443408|gb|EIW20949.1| preprotein translocase, SecA subunit [Pelosinus fermentans B4]
Length = 838
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 283/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA+RD+
Sbjct: 80 MRHFDVQLLGGITLHEGNIAEMRTGEGKTLVGTLATYLNALTGKGVHVVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGLI G+ +R+ Y DITY N+E GFDYLRDN+ +EQ+V
Sbjct: 140 EWMGKVYRFLGLTVGLIVHGLDFVDRKQAYHADITYGTNNEFGFDYLRDNMVIYAEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG K Y V A++ L +G YTV+ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGEKSTELYHVLARITPKLKEGEDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE GIA AE L +L+D N + ALKAK +RD Y+V++G+ +I
Sbjct: 257 TRTVAPTESGIAKAEKLLGITNLYDHANIEMSHHFNQALKAKGLMKRDRDYVVKDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQ++EAKEG+K++ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQSIEAKEGVKVERESQTLASITFQNYFRMYKKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++++ VI +PTN R DLP + T K+ + G+PVLVG
Sbjct: 377 TEEAEFRKIYKLDVITIPTNKEVSRTDLPDVIYKTTGAKYRAVVNSIVERHAKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE+LSD+LK++ +PHNVLNA KY EA+ +AQAG+ A+TI+TNMAGRGTDI
Sbjct: 437 TTSIVQSEHLSDMLKKKDVPHNVLNA--KYHEMEAQIIAQAGQPGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 71/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+ F +SL+D++ + F D
Sbjct: 497 GEGVADLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSHFFLSLEDDLMRLFGSDNIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I R + Q E F +RK ++E+D+V+ QR+ +Y
Sbjct: 557 TI--MDKLGMEEDEPIEHSLITRSIEQAQKKVEGRNFDMRKHVLEYDDVMNQQREVIYGQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ILTG E + IF ++ +++ + D +P W+ L+ + +D
Sbjct: 615 RRQILTG--EDMKENIFHMIEKLINRGMELFADEKLYPEDWNTQGLV--------EYCED 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+FA + LK+ EEL L+ ++ + L + +D
Sbjct: 665 IFA---PEGQLKA-EELGNLSRTELQ------------------------EELLKVATD- 695
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ N R E+ + M+E+E+ V++K +D W +HL
Sbjct: 696 -SYNAR-------------------------EALFGSDNMREMEKVVMLKVVDSKWMEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
M+ L +++RS+G R+PL EYKI+ F ++ + E +V+Y
Sbjct: 730 DAMDMLREGISLRSYGQRDPLIEYKIEAYDMFQQLID----IIQEEIVKY 775
>gi|188586827|ref|YP_001918372.1| protein translocase subunit secA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351514|gb|ACB85784.1| protein translocase subunit secA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 886
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/430 (48%), Positives = 283/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT ++TVNDYLAQRD+
Sbjct: 81 MRHFDVQVLGGVVLHQGRIAEMKTGEGKTLVATMPAYLNALTGKGVHIITVNDYLAQRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+ FLGL VGLI GM +ERR +Y CDI + N+E GFDYLRDN+A + L
Sbjct: 141 EWMGEVYNFLGLEVGLIVHGMNSQERRESYACDIVFGTNNEFGFDYLRDNMALYEKDLTQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAI+DEVDS+L+DE R PL+ISG + K Y AK +L Q YTV+ K
Sbjct: 201 R---ELNFAIIDEVDSILVDEARTPLIISGASDKPKELYYKMAKFVPILKQDEDYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
NSV LTE+G+ AE L ++L+D+ N + + ALKA +RD Y+V NG+ +I
Sbjct: 258 ANSVMLTEDGVDKAERFLGVDNLYDDTNLELSHHLNQALKAHALMKRDNDYVVENGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR RR+S+G+HQA+EAKEG++I+ ++ +A IT+Q+ FKLY KLSGMTGTA
Sbjct: 318 VDQFTGRKMPGRRYSDGLHQAIEAKEGVQIEKENQTLASITFQNFFKLYNKLSGMTGTAA 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++ M V+ VPTN P IR DLP + + T K++ ++E + G+PVLVG
Sbjct: 378 TEEEEFQEIYGMDVVIVPTNEPMIREDLPDRVYKTEEAKFQAVADDIEECYNRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++G+ H VLNA K+ +EAE + AG+K +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSEELSHMLKKRGVSHQVLNA--KHHEKEAEIIKNAGQKGTVTIATNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LG K L
Sbjct: 496 VLGPGVKELG 505
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 171/344 (49%), Gaps = 67/344 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL+VIGT HESRRIDNQLRGR+GRQGDPG++RF VSL+D++ + F D +
Sbjct: 498 GPGVKELGGLYVIGTERHESRRIDNQLRGRSGRQGDPGASRFYVSLEDDLMRLFGSDNIY 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ ++ +ED I+ + + Q E F IRK ++E+D V++ QRK +Y+
Sbjct: 558 S--MMDKLGMEEDQAIDSSFVSSAIENAQKKVEGRNFSIRKHVLEYDNVMDQQRKVIYEQ 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL----KEFIAIAGK 703
R+ +L G N +I + V++E I +P W LD L+ K F+
Sbjct: 616 RRQVLQGDN--LRDEIMDMISDVIEEAIESYASEKIYPEEWDLDALMQFGRKSFL----- 668
Query: 704 ILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
LPE S+ LK
Sbjct: 669 --------------------LPEKGSV------------------------QELK----- 679
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+LT + + + +R+YL D+ +Y +E + M+EVER +L++ +D W
Sbjct: 680 ---ELTNDKEPKEAIDAMREYLMDLAKEAYQE--KEDEIGEERMREVERVILLRVVDSKW 734
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
DHL M +L + +R++G +NPL EYK +G + F +M+++ +
Sbjct: 735 MDHLDAMEQLRQGIGLRAYGQKNPLVEYKYEGYQMFQNMIASIK 778
>gi|312126884|ref|YP_003991758.1| preprotein translocase, seca subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|311776903|gb|ADQ06389.1| preprotein translocase, SecA subunit [Caldicellulosiruptor
hydrothermalis 108]
Length = 848
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLTHEERKKAYNCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHGLM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IRVD P + + T + K+E Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRVDHPDKVYKTEKAKFEAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG+K
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQKG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G N I + +VD I HP W + LL++
Sbjct: 630 RRKVLEGEN--LRDSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDL 677
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMVKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANVENMPQRE 801
>gi|392963550|ref|ZP_10328976.1| Protein translocase subunit secA [Pelosinus fermentans DSM 17108]
gi|392451374|gb|EIW28368.1| Protein translocase subunit secA [Pelosinus fermentans DSM 17108]
Length = 838
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 283/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA+RD+
Sbjct: 80 MRHFDVQLLGGITLHEGNIAEMRTGEGKTLVGTLATYLNALTGKGVHVVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGLI G+ +R+ Y DITY N+E GFDYLRDN+ +EQ+V
Sbjct: 140 EWMGKVYRFLGLTVGLIVHGLDFVDRKQAYHADITYGTNNEFGFDYLRDNMVIYAEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG K Y V A++ L +G YTV+ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGEKSTELYHVLARITPKLKEGEDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE GIA AE L +L+D N + ALKAK +RD Y+V++G+ +I
Sbjct: 257 TRTVAPTESGIAKAEKLLGITNLYDHANIEMSHHFNQALKAKGLMKRDRDYVVKDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQ++EAKEG+K++ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQSIEAKEGVKVERESQTLASITFQNYFRMYKKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++++ VI +PTN R DLP + T K+ + G+PVLVG
Sbjct: 377 TEEAEFRKIYKLDVITIPTNKEVSRTDLPDVIYKTTGAKYRAVVNSIVERHAKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE+LSD+LK++ +PHNVLNA KY EA+ +AQAG+ A+TI+TNMAGRGTDI
Sbjct: 437 TTSIVQSEHLSDMLKKKDVPHNVLNA--KYHEMEAQIIAQAGQPGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+ F +SL+D++ + F D
Sbjct: 497 GEGVADLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSHFFLSLEDDLMRLFGSDNIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I R + Q E F +RK ++E+D+V+ QR+ +Y
Sbjct: 557 TI--MDKLGMEEDEPIEHSLITRSIEQAQKKVEGRNFDMRKHVLEYDDVMNQQREVIYGQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ ILTG E + IF ++ +++ + D +P W+ L++
Sbjct: 615 RRQILTG--EDMKENIFHMIEKLINRGMELFADEKLYPEDWNTQGLVE 660
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 764 CSDDLTKNGRYRATT--NLLRKYLGDIL--IASYLNVVQESRYDDVYMKEVERAVLVKTL 819
C D G+ +A NL R L + L +A+ +E+ + M+E+E+ V++K +
Sbjct: 662 CEDVFAPEGQLKAEELGNLSRTELQEELLKVATDSYNAREALFGSDNMREMEKVVMLKVV 721
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
D W +HL M+ L +++RS+G R+PL EYKI+ F ++ + E +V+Y
Sbjct: 722 DSKWMEHLDAMDMLREGISLRSYGQRDPLIEYKIEAYDMFQQLID----IIQEEIVKY 775
>gi|222056169|ref|YP_002538531.1| preprotein translocase subunit SecA [Geobacter daltonii FRC-32]
gi|254767916|sp|B9M3K9.1|SECA_GEOSF RecName: Full=Protein translocase subunit SecA
gi|221565458|gb|ACM21430.1| preprotein translocase, SecA subunit [Geobacter daltonii FRC-32]
Length = 894
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/450 (48%), Positives = 287/450 (63%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHQGKIAEMKTGEGKTLVATLPSYLNAITGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+H FLGL VG+I G+ EERR Y DITY N+E GFDYLRDN+ E V
Sbjct: 141 EWMGRIHNFLGLRVGVIIHGLDDEERRDAYNADITYGTNNEFGFDYLRDNMKFALEDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R F+FAIVDEVDS+LIDE R PL+ISG +Y + ++ LL +G
Sbjct: 201 R---DFNFAIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPLLKKGEVVEEEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAK 198
YTV+ K S LTEEG+ E L+ +L+D D V AL+A
Sbjct: 258 TLSGKRKRYTGDYTVDEKAKSATLTEEGVLKVEKLLKIENLYDPRDIETLHHVNQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
++ DV Y+V+ G+ +I++E TGR+ RRWS+G+HQA+EAKEG+KI+ ++ +A IT+
Sbjct: 318 ALFKLDVDYVVKEGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGVKIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KLSGMTGTA TE +EF K++++ V +PTN +R D P + T R K+
Sbjct: 378 QNYFRMYEKLSGMTGTADTEAEEFHKIYKLDVTVIPTNRVLLRPDFPDVIYKTEREKFNA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+EV+ + G+PVLVG+ S+E SE L++LL++QGIPHNVLNA K +EAE VAQAG
Sbjct: 438 VIEEVKELHAKGQPVLVGTISIEKSEELAELLRRQGIPHNVLNA--KQHEKEAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
RK +TI+TNMAGRGTDI+LGGN + ++K+
Sbjct: 496 RKGMVTIATNMAGRGTDILLGGNAEAMSKQ 525
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
C E EV LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SLQD++ + F
Sbjct: 548 QCVKEHDEVVSLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLQDDLLRIFG 607
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ ++ + +E I I + + Q E + F IRK L+++D+V+ QR+
Sbjct: 608 --SERVSKIMDMLKIEEGEAITHGLITKAIENAQRKVEAHNFEIRKHLIDYDDVMNKQRE 665
Query: 643 HVYDLRQSILTG 654
+Y R+ IL G
Sbjct: 666 VIYAQRREILAG 677
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 785 LGDILIASYLNVVQE--SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
L D+L V E + + D + + + ++++++D W+DHL++++ L + +R +
Sbjct: 741 LRDLLQEKVQEVFSEKVTEFGDELIDHLIKVIMLQSIDAQWKDHLLSIDHLKEGIGLRGY 800
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYW 878
G ++P +EYK + + F+ M+ R VE + +W
Sbjct: 801 GQKDPKQEYKKEAYQLFMDMMGRIREEVVEKI--FW 834
>gi|344997090|ref|YP_004799433.1| protein translocase subunit secA [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965309|gb|AEM74456.1| Protein translocase subunit secA [Caldicellulosiruptor
lactoaceticus 6A]
Length = 848
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLTHEERKKAYSCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K+E Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG+K
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQKG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G N I + +VD I HP W + LL++
Sbjct: 630 RRKVLEGEN--LRDSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDL 677
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANVENMPQRE 801
>gi|432340093|ref|ZP_19589588.1| preprotein translocase subunit SecA, partial [Rhodococcus
wratislaviensis IFP 2016]
gi|430774826|gb|ELB90394.1| preprotein translocase subunit SecA, partial [Rhodococcus
wratislaviensis IFP 2016]
Length = 854
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 82 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 202 G---HSFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 259 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 379 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 69/362 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 590 ELMRRFN--GAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 648 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 701
Query: 693 L---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L LK + + + G G+T + +EL E D ++ Y
Sbjct: 702 LWTALKTLYPVGLDYKELVGDGDDGETNDITADELRETLLKDAHDAY------------- 748
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
RR++ D + G R L R+ L +L
Sbjct: 749 ARREAE---------IDGVAGEGSMR---ELERRVLLSVL-------------------- 776
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
D WR+HL M+ L + +R+ R+PL EY+ +G F ML +
Sbjct: 777 ----------DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFGGMLEGLKEE 826
Query: 870 TV 871
+V
Sbjct: 827 SV 828
>gi|325107483|ref|YP_004268551.1| protein translocase subunit secA [Planctomyces brasiliensis DSM
5305]
gi|324967751|gb|ADY58529.1| protein translocase subunit secA [Planctomyces brasiliensis DSM
5305]
Length = 1189
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/429 (49%), Positives = 278/429 (64%), Gaps = 28/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT----------------------VVTVNDYLAQRDAE 38
MRH+DVQ++GG VLH G+IAEM T VVTVNDYLA+RD E
Sbjct: 111 MRHYDVQMVGGYVLHGGNIAEMVTGEGKTLVSTLPAYLNALAGKVHVVTVNDYLAKRDME 170
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +H LGLSVG +Q M ER+ Y DITY N+ELGFDYLRDN+ E M+
Sbjct: 171 WMGAIHMGLGLSVGAVQSQMSYPERQRAYAADITYGTNNELGFDYLRDNMKPRRE---MQ 227
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P FAIVDE+D++LIDE R PL+ISG A DV +YP A ++A L + H+ V+ K
Sbjct: 228 VQGPLDFAIVDEIDNILIDEARTPLIISGPAHDDVTKYPKAHRIAMQLKKDEHFEVKEKE 287
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+EGI AE + + N W + N+L+A +++DV Y+V NG+ +I+
Sbjct: 288 HTCHLTDEGIRKAEELAGVDSFYTAGNMEWPHLIDNSLRAIHLFKKDVTYVVENGEVVIV 347
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR R+WS+G+HQAVE+KEG++I+ + +A IT Q+ FKLY KL GMTGTA T
Sbjct: 348 DEHTGRKMYGRQWSDGLHQAVESKEGVRIKETTQTLATITLQNFFKLYKKLGGMTGTAMT 407
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + VI +PTN P R++ P F + + KW+ E+ + + GRP+LVG+
Sbjct: 408 EANEFYKIYNLDVIAIPTNKPTQRINYPDVIFQSHKEKWDAVVNEIREVKQTGRPILVGT 467
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS L + GI H VLNA KY REAE V+QAGR A+TISTNMAGRGTDII
Sbjct: 468 ASIENSELLSKKLNRFGIEHQVLNA--KYHEREAEFVSQAGRSNAVTISTNMAGRGTDII 525
Query: 398 LGGNPKMLA 406
LGGNP+ LA
Sbjct: 526 LGGNPEHLA 534
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ GGL+VIGT H++RRID QLRGRAGRQGDPGS+RF +SL+D++ + F+ D
Sbjct: 569 EAKKVREAGGLYVIGTERHDARRIDLQLRGRAGRQGDPGSSRFFISLEDDLMRIFAGD-- 626
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ +++ + + IE + +Q+ Q E++YF RK+L+E+DEV++ QRK VY+
Sbjct: 627 FVRNMLGSLGMKDGEAIESPMVTKQIEKAQKRREEFYFEQRKNLLEYDEVMDEQRKRVYN 686
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP 681
RQ IL GAN C + I + V + DP
Sbjct: 687 YRQRILDGAN--CRELIITMVNRQVQRAVDHFFDP 719
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+ ER++L++ LD W++HL M+ L S + + S+ ++P EYK +G + F M
Sbjct: 1034 QAERSILLEVLDHAWKEHLYFMDHLRSGIGLVSYAQKDPKVEYKREGMKAFEQM 1087
>gi|363419291|ref|ZP_09307392.1| preprotein translocase subunit SecA [Rhodococcus pyridinivorans
AK37]
gi|359737376|gb|EHK86308.1| preprotein translocase subunit SecA [Rhodococcus pyridinivorans
AK37]
Length = 960
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G+I+EMKT VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQIMGGAALHFGNISEMKTGEGKTLTCVLPAYLNAISGDGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR LGL +I GM P +RR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 140 WMGRVHRSLGLETDVILSGMTPAQRRAAYSADITYGTNNEFGFDYLRDNMTHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A+LL +HY ++++
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADASSKWYSEFARIAKLLKPEVHYEIDIRK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NA+KAKE Y +D YIVRNG+ +I+
Sbjct: 257 RTVGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYAKDKDYIVRNGEVVIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRVLSGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K+ +V G+PVL+G+
Sbjct: 377 EAAELHQIYSLGVIPIPTNRPMVRVDQGDLIYKTEEAKFAAVVDDVVERHEKGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+PH+VLNA K+ +EA+ +AQAGR A+T++TNMAGRGTD++
Sbjct: 437 TSVERSEYLSRQFTKRGVPHSVLNA--KFHEQEAQIIAQAGRSGAVTVATNMAGRGTDVV 494
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 495 LGGNPDILA 503
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 11/181 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 528 TLERIKAESKADAEKVRAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 588 ELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G E Q+ Q ++ ++I VD Y W L++
Sbjct: 646 VMNQQRTVIYEERRRILRG--EDLEGQV----QHMLTDVITAYVDGATAEGYVEDWDLEQ 699
Query: 693 L 693
L
Sbjct: 700 L 700
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML
Sbjct: 757 MRELERRVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFTAMLEGL 816
Query: 867 RRLTV 871
+ +V
Sbjct: 817 KEESV 821
>gi|397736723|ref|ZP_10503401.1| preprotein translocase, SecA subunit [Rhodococcus sp. JVH1]
gi|396927304|gb|EJI94535.1| preprotein translocase, SecA subunit [Rhodococcus sp. JVH1]
Length = 955
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 82 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 202 G---HSFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 259 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 379 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 70/362 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 590 ELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 648 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 701
Query: 693 L---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L LK + G +L G+T + +EL E D ++ Y
Sbjct: 702 LWTALKTLYPV-GVDYKELVGDGDGETNDITADELRETLLTDAHDAY------------- 747
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
RR++ D + G R L R+ L +L + +E Y+ Y+KE
Sbjct: 748 ARREAE---------IDGVAGAGSMR---ELERRVLLSVLDRKW----REHLYEMDYLKE 791
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ +R+ R+PL EY+ +G F ML +
Sbjct: 792 --------------------------GIGLRAMAQRDPLVEYQREGFDMFGGMLEGLKEE 825
Query: 870 TV 871
+V
Sbjct: 826 SV 827
>gi|410478483|ref|YP_006766120.1| preprotein translocase subunit SecA [Leptospirillum ferriphilum
ML-04]
gi|424866246|ref|ZP_18290087.1| Preprotein translocase SecA subunit [Leptospirillum sp. Group II
'C75']
gi|124515817|gb|EAY57326.1| Preprotein translocase SecA subunit [Leptospirillum rubarum]
gi|387223043|gb|EIJ77415.1| Preprotein translocase SecA subunit [Leptospirillum sp. Group II
'C75']
gi|406773735|gb|AFS53160.1| preprotein translocase subunit SecA [Leptospirillum ferriphilum
ML-04]
Length = 908
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 283/431 (65%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGVVLHEGFIAEMKTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R++RFLGL+ G+IQ M + R+ Y DITY N+E GFDYLRDN+ +Q V
Sbjct: 141 DWMGRLYRFLGLTTGIIQHDMPDDLRKQAYAADITYGTNNEFGFDYLRDNMKYEEDQFVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + Y ++ +V+ H+ ++ K
Sbjct: 201 RG---LHYAIVDEVDSILIDESRTPLIISGPSEESTDMYYQVDRIIPGMVRDTHFRIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT+EG E L +L+D N W V+ ALKA YRRDV+Y+V+NG+ +I
Sbjct: 258 LKTVTLTDEGNNYVEDRLGIGNLYDVANINWFHHVLQALKAHHLYRRDVEYVVKNGEVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRW EG+HQAVEAKE +KI+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRWGEGLHQAVEAKEKVKIEQENQTLATITFQNYFRMYEKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + VI VPT+ N R DLP Q + T K +++ G+PVLVG
Sbjct: 378 TEAQEFHKIYNLDVIVVPTHRKNQREDLPDQIYRTYHEKARAIVEDIRERNGRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE+LS LL ++GIPH VLNA K+ EAE VAQAGR ++TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSEHLSALLAKEGIPHKVLNA--KFHELEAEIVAQAGRFSSVTIATNMAGRGTDI 495
Query: 397 ILGGNPKMLAK 407
+LGGN + L K
Sbjct: 496 VLGGNAEFLLK 506
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 4/192 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S+ K+ E E EV R GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+
Sbjct: 526 SLRKELEKTLEKEREEVVRTGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLE 585
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F D L+ R+ +E +PIE + + + Q E ++F +RK L+E+D
Sbjct: 586 DDLLRIFGADRIKG--LMDRLGVEEGVPIEHGFVTKAIENAQKKVEAHHFDVRKQLLEYD 643
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ QR Y+LR+ +L G E+ + ++ Q V+ + ++P W L L
Sbjct: 644 DVMNQQRLIFYELRRKVLRG--ENLKDLLEEWGQDVLLSVTREFAPEDQYPETWDLAALA 701
Query: 695 KEFIAIAGKILD 706
+ G +D
Sbjct: 702 TGIMEKTGLSID 713
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
R ++++ LD W++HL+NM+ L + +R +G ++PL EY+ +G F +S+ +
Sbjct: 754 RYLVLQNLDEQWKEHLLNMDHLKEGIGLRGYGQKDPLVEYRREGFILFEQFVSSVQ 809
>gi|312792716|ref|YP_004025639.1| preprotein translocase, seca subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179856|gb|ADQ40026.1| preprotein translocase, SecA subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 848
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLTHEERKKAYSCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K+E Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG+K
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQKG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G N I + +VD I HP W + LL++
Sbjct: 630 RRKVLEGEN--LRDSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDL 677
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANVENMPQRE 801
>gi|424851793|ref|ZP_18276190.1| preprotein translocase, SecA subunit, partial [Rhodococcus opacus
PD630]
gi|356666458|gb|EHI46529.1| preprotein translocase, SecA subunit, partial [Rhodococcus opacus
PD630]
Length = 863
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 96 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 155
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 156 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 215
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 216 G---HSFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 272
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 273 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 332
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 333 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 392
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 393 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 452
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 453 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 510
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 511 LGGNPDIIA 519
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 69/362 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 544 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 603
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 604 ELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 661
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 662 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 715
Query: 693 L---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L LK + + + G G+T + +EL E D ++ Y
Sbjct: 716 LWTALKTLYPVGLDYKELVGEGDDGETNDITADELRETLLKDAHDAY------------- 762
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
RR++ D + G R L R+ L +L
Sbjct: 763 ARREAE---------IDGVAGEGSMR---ELERRVLLSVL-------------------- 790
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
D WR+HL M+ L + +R+ R+PL EY+ +G F ML +
Sbjct: 791 ----------DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFGGMLEGLKEE 840
Query: 870 TV 871
+V
Sbjct: 841 SV 842
>gi|375137595|ref|YP_004998244.1| Preprotein translocase subunit SecA [Mycobacterium rhodesiae NBB3]
gi|359818216|gb|AEV71029.1| preprotein translocase, SecA subunit [Mycobacterium rhodesiae NBB3]
Length = 944
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT VVTVNDYLA+RDAE
Sbjct: 78 RHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I G+ P+ERR Y DITY N+E GFDYLRDN+A + E LV R
Sbjct: 138 WMGRVHRFLGLEVGVILSGLTPDERRVAYGADITYGTNNEFGFDYLRDNMAHSLEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+++
Sbjct: 198 G---HNFAVVDEVDSILIDEARTPLIISGPADGASNWYSEFARLAPLMEKDVHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ N++KAKE + RD YIVR+G+ LI+
Sbjct: 255 RTIGVHEIGVEFVEDQLGIDNLYEAANSPLVSYLNNSIKAKELFTRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLVGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN +RVD + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVSIPTNKSMVRVDQSDLIYKTEEAKYIAVVDDVSERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEANIIAEAGRLNAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L K + D+ L
Sbjct: 493 LGGNVDFLVDKRLRDQGL 510
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 167/361 (46%), Gaps = 67/361 (18%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L + ++E V +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 LLPQVKAEAADEAKNVIEVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ T + L++R+ +D+PIE + R + Q E+ F +RK+++++DE
Sbjct: 586 ELMRRFNGATLES--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFEVRKNVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL-- 693
V+ QR +YD R+ IL G E+ + Q + + VV + G + W L++L
Sbjct: 644 VMNKQRMVIYDERRRILEG--ENLADQAEKMLVDVVTAYVEGATAE-GYSEDWDLEQLWT 700
Query: 694 -LKEFIAIAGKILDDLFAGISGDTLLKS--IEELPELNSIDINNFYFPDLPKPPNLFRGI 750
L++ + GI L+ S I E EL ++ D
Sbjct: 701 ALRQLYPV----------GIDHHDLIDSDAIGEAGELTREELLEALLAD----------- 739
Query: 751 RRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEV 810
KR A +L K A L R L LNV+
Sbjct: 740 ------AKRAYAAREKELEKIAGEGAMRQLERNVL--------LNVI------------- 772
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
D WR+HL M+ L + +R+ R+PL EY+ +G FI ML + +
Sbjct: 773 ---------DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFIGMLEGMKEES 823
Query: 871 V 871
V
Sbjct: 824 V 824
>gi|419964817|ref|ZP_14480770.1| preprotein translocase subunit SecA [Rhodococcus opacus M213]
gi|414569929|gb|EKT80669.1| preprotein translocase subunit SecA [Rhodococcus opacus M213]
Length = 940
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 66 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 126 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 186 G---HSFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 242
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 243 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 302
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 303 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 362
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 363 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 422
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 423 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 480
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 481 LGGNPDIIA 489
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 514 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 573
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 574 ELMRRFN--GAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 631
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 632 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 685
Query: 693 L 693
L
Sbjct: 686 L 686
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML
Sbjct: 748 MRELERRVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFGGMLEGL 807
Query: 867 RRLTV 871
+ +V
Sbjct: 808 KEESV 812
>gi|226365799|ref|YP_002783582.1| preprotein translocase subunit SecA [Rhodococcus opacus B4]
gi|254767928|sp|C1B1E2.1|SECA_RHOOB RecName: Full=Protein translocase subunit SecA
gi|226244289|dbj|BAH54637.1| preprotein translocase SecA subunit [Rhodococcus opacus B4]
Length = 955
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 82 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 202 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 259 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K+ +V G+PVL+G+
Sbjct: 379 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFHAVVDDVVERHEKGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 590 ELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 648 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 701
Query: 693 L 693
L
Sbjct: 702 L 702
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML
Sbjct: 763 MRELERRVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFGGMLEGL 822
Query: 867 RRLTV 871
+ +V
Sbjct: 823 KEESV 827
>gi|421077423|ref|ZP_15538394.1| Protein translocase subunit secA [Pelosinus fermentans JBW45]
gi|392524811|gb|EIW47966.1| Protein translocase subunit secA [Pelosinus fermentans JBW45]
Length = 839
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 283/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA+RD+
Sbjct: 80 MRHFDVQLLGGITLHEGNIAEMRTGEGKTLVGTLATYLNALTGKGVHVVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGLI G+ +R+ Y DITY N+E GFDYLRDN+ +EQ+V
Sbjct: 140 EWMGKVYRFLGLTVGLIVHGLDFVDRKQAYHADITYGTNNEFGFDYLRDNMVIYAEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG K Y V A++ L +G YTV+ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGEKSTELYHVLARITPKLKEGEDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE GIA AE L +L+D N + ALKAK +RD Y+V++G+ +I
Sbjct: 257 TRTVAPTESGIAKAEKLLGITNLYDHANIEMSHHFNQALKAKGLMKRDRDYVVKDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQ++EAKEG+K++ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQSIEAKEGVKVERESQTLASITFQNYFRMYNKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++++ VI +PTN R DLP + T K+ + G+PVLVG
Sbjct: 377 TEEAEFRKIYKLDVITIPTNKEVSRTDLPDVIYKTTGAKYRAVVNSIVERHAKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE+LSD+LK++ +PHNVLNA KY EA+ +AQAG+ A+TI+TNMAGRGTDI
Sbjct: 437 TTSIVQSEHLSDMLKKKDVPHNVLNA--KYHEMEAQIIAQAGQPGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 172/350 (49%), Gaps = 71/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+ F +SL+D++ + F D
Sbjct: 497 GEGVADMGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSHFFLSLEDDLMRLFGSDNIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I R + Q E F +RK ++E+D+V+ QR+ +Y
Sbjct: 557 TI--MDKLGMEEDEPIEHSLITRSIEQAQKKVEGRNFDMRKHVLEYDDVMNQQREVIYGQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ILTG E + IF ++ +++ + D +P W+ L+ + +D
Sbjct: 615 RRQILTG--EDMKENIFHMIEKLINRGMELFADEKLYPEDWNTQGLV--------EYCED 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+FA + LK+ EEL L+ ++ + L + +D
Sbjct: 665 IFA---PEGQLKA-EELGNLSRTELQ------------------------EELLKVATD- 695
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ N R E+ + M+E+E+ V++K +D W +HL
Sbjct: 696 -SYNAR-------------------------EALFGSDNMREMEKVVMLKVVDSKWMEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
M+ L +++RS+G R+PL EYKI+ F ++ + E +V+Y
Sbjct: 730 DAMDMLREGISLRSYGQRDPLIEYKIEAYDMFQQLID----IIQEDIVKY 775
>gi|420932807|ref|ZP_15396082.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-151-0930]
gi|420936585|ref|ZP_15399854.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-152-0914]
gi|420943067|ref|ZP_15406323.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-153-0915]
gi|420948714|ref|ZP_15411964.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-154-0310]
gi|392137566|gb|EIU63303.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-151-0930]
gi|392142100|gb|EIU67825.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-152-0914]
gi|392148164|gb|EIU73882.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-153-0915]
gi|392155744|gb|EIU81450.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
1S-154-0310]
Length = 929
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 168/364 (46%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E+ EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVSLKPEELIASGEYG--------EVDELSPEDLKAALLDDAKK----- 742
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G R
Sbjct: 743 -AYKAREAEI--------DGLAGEGSMR-------------------------------- 761
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
++ER +L+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +ML +
Sbjct: 762 -QLERNILLSVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFSAMLDGLK 820
Query: 868 RLTV 871
+V
Sbjct: 821 EESV 824
>gi|377572359|ref|ZP_09801449.1| protein translocase subunit SecA [Gordonia terrae NBRC 100016]
gi|377530455|dbj|GAB46614.1| protein translocase subunit SecA [Gordonia terrae NBRC 100016]
Length = 941
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM RR Y DITY N+E GFDYLRDN+A + E LV R
Sbjct: 138 WMGRVHRFLGLDTAVILTGMSSAARREAYAADITYGTNNEFGFDYLRDNMAHSLEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HAFAIVDEVDSILVDEARTPLIISGPAEGSSKWYTEFARIAPLLERDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NA+K KE ++RD YIVRNG +I+
Sbjct: 255 KTVGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFQRDKDYIVRNGNVMIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYEKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ +V G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFAAVVDDVTERHETGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK++ +PH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLKKREVPHSVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 105/170 (61%), Gaps = 7/170 (4%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+
Sbjct: 534 AAKEAEEVRAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNG 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ ++R+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 594 GALEAI--MNRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNEQRKV 649
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R++IL G E +Q+ Q + VV + G + W LD+L
Sbjct: 650 IYAERRTILEG--EDHHEQVKQMVSDVVGAYVEGAT-AEGYAEDWDLDEL 696
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER+VL+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 758 MRQLERSVLLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFHGMLEG- 816
Query: 867 RRLTVESLVQYWSSPMESQE 886
L E+L +++ +++++
Sbjct: 817 --LKEEALTILFNAQVQTEQ 834
>gi|334337809|ref|YP_004542961.1| protein translocase subunit secA [Isoptericola variabilis 225]
gi|334108177|gb|AEG45067.1| Protein translocase subunit secA [Isoptericola variabilis 225]
Length = 989
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/439 (49%), Positives = 289/439 (65%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVT ND+LA+ E
Sbjct: 81 RHFDVQLMGGAALHLGNIAEMKTGEGKTLVATTAAYLNALEGKGVHVVTTNDFLAKYQGE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLG++ G+I G P ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 LMGRVYRFLGMTTGIILSGQSPAERREQYAADITYGTNNEFGFDYLRDNMAWSPDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGLHYTVELK 157
HFAIVDEVDS+LIDE R PL+ISG AS D R+ V AKV L G Y V+ K
Sbjct: 201 G---HHFAIVDEVDSILIDEARTPLIISGPASGDANRWYVEFAKVVRRLEAGKDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y+V NG+ +I
Sbjct: 258 KRTVGVLEPGIEKIEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVLNGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVQIKAENQTLATITLQNYFRLYDKLAGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN P IR+D P + GK+ +++ G+PVLVG
Sbjct: 378 TEAAEFQSTYKLGVVPIPTNRPMIRIDQPDLVYKNEAGKFAAVVEDIVERHAKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LLK+ G+PHNVLNA K REA VAQAGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSERLSQLLKRAGVPHNVLNA--KEHEREAAIVAQAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + LA + + +R L
Sbjct: 496 MLGGNAEFLAVQEMAERGL 514
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 167/345 (48%), Gaps = 69/345 (20%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + F ++ A
Sbjct: 544 EVVALGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMRLF--NSGLAS 601
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+++R +D+P+E + R + Q E F IRK+++++D+VL QR +Y R+
Sbjct: 602 SMMNRAGFPDDVPLESKMVTRGIQSAQSQVEARNFEIRKNVLKYDDVLSRQRSVIYAERR 661
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLF 709
+L G E +Q+ ++ VV + G P W LD L+
Sbjct: 662 RVLQG--EDLHEQVQHFLTDVVTAYVDGATSS-GTPEEWD---------------LDSLW 703
Query: 710 AGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLT 769
T L+++ +P ++I +D+
Sbjct: 704 ------TALRAV---------------YP----------------------VSITPEDVV 720
Query: 770 K--NGRYRATTNL-LRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ G R T + L + L D +A +E + M+++ER V++ LD WR+H
Sbjct: 721 EEAGGAGRLTREMVLDELLSDARVAYE---AREEQLGSAAMRQLERRVVLSVLDRKWREH 777
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
L M+ L + +R+ R+PL EY+ +G + F +M A + +V
Sbjct: 778 LYEMDYLKEGIGLRAMAQRDPLVEYQREGYQLFQAMTEAIKEESV 822
>gi|404216203|ref|YP_006670398.1| Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Gordonia sp. KTR9]
gi|403647002|gb|AFR50242.1| Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Gordonia sp. KTR9]
Length = 939
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALAGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM RR Y DITY N+E GFDYLRDN+A + E LV R
Sbjct: 138 WMGRVHRFLGLDTAVILTGMSSAARREAYAADITYGTNNEFGFDYLRDNMAHSLEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HAFAIVDEVDSILVDEARTPLIISGPAEGSSKWYTEFARIAPLLERDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NA+K KE ++RD YIVRNG +I+
Sbjct: 255 KTVGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFQRDKDYIVRNGNVMIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYEKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ +V G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQGDLIYKTEEAKFAAVVDDVTERHEAGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK++ +PH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLKKREVPHSVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 107/173 (61%), Gaps = 13/173 (7%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+
Sbjct: 534 AAKDAEKVRAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNG 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ ++R+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 594 GALEAI--MNRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNEQRKV 649
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R++IL G E +Q+ Q +V +++ VD Y W LD+L
Sbjct: 650 IYAERRTILEG--EDHHEQV----QEMVSDVVGAYVDGATAEGYAEDWDLDEL 696
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER+VL+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 758 MRQLERSVLLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFHGMLEG- 816
Query: 867 RRLTVESLVQYWSSPMESQE 886
L E+L +++ +++++
Sbjct: 817 --LKEEALTILFNAQVQTEQ 834
>gi|269957289|ref|YP_003327078.1| preprotein translocase subunit SecA [Xylanimonas cellulosilytica
DSM 15894]
gi|269305970|gb|ACZ31520.1| preprotein translocase, SecA subunit [Xylanimonas cellulosilytica
DSM 15894]
Length = 981
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/437 (49%), Positives = 286/437 (65%), Gaps = 30/437 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVT NDYLA+ E
Sbjct: 81 RHFDVQLMGGAALHLGNIAEMKTGEGKTLVATTAAYLNALEGEGVHVVTTNDYLAKYQGE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLG+S G+I G P ERR Y CDITY N+E GFDYLRDN+A ++ LV R
Sbjct: 141 LMGRVYRFLGMSTGVILTGQTPAERREMYACDITYGTNNEFGFDYLRDNMAWATDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
HFAIVDEVDS+LIDE R PL+ISG A D R Y +KV L G Y V+ K
Sbjct: 201 G---HHFAIVDEVDSILIDEARTPLIISGPAGGDANRWYTEFSKVVRRLDAGTDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GIA E L ++L++ N P F+ NA+KAKE ++RD Y+V NG+ +I
Sbjct: 258 KRTVGVLEPGIAKIEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVLNGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL GMTGTA+
Sbjct: 318 VDEHTGRMLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYAKLGGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN P +R+D P + GK+ ++ G+PVLVG
Sbjct: 378 TEAAEFQSTYKIGVVPIPTNRPMVRIDQPDLVYKNEEGKYAAVVADIVERHAKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SEYLS L++ G+PH+VLNA K AREA +A AGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSEYLSGQLRKAGVPHSVLNA--KEHAREASVIALAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDR 413
+LGGN + +A + + +R
Sbjct: 496 MLGGNAEFVAVQTMTER 512
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 178/374 (47%), Gaps = 73/374 (19%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+L+ + + E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+Q
Sbjct: 529 GILEQAKASVATEHEEVTELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMQ 588
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F++ A +++R +D+P+E + R + Q E F IRK+++++D
Sbjct: 589 DDLMR--LFNSGLAESMMNRAGFPDDVPLESKMVTRGIQSAQSQVEARNFEIRKNVLKYD 646
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+VL QR+ +Y R+ +L G E + QI + V+ + G P W L+ L
Sbjct: 647 DVLSRQREVIYAERRRVLEG--EDLADQITHFRNDVIAAYVDGATAE-GTPESWDLEGLW 703
Query: 695 KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKS 754
T LKS+ +P
Sbjct: 704 ---------------------TALKSV---------------YP---------------- 711
Query: 755 SSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD---DVYMKEVE 811
++I DD+ + T L R+ + + L S V ++R + + M+++E
Sbjct: 712 ------VSITPDDVIEEAG--GATKLTRELVLEEL-QSDAQVAYDARTETLGEAGMRQLE 762
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R V++ LD WR+HL M+ L + +R+ R+PL EY+ +G + F +M A + +V
Sbjct: 763 RRVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFQLFSAMTDAIKEESV 822
Query: 872 ESL----VQYWSSP 881
L VQ +P
Sbjct: 823 GFLYNLEVQVQQAP 836
>gi|365871494|ref|ZP_09411035.1| preprotein translocase subunit SecA [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|421050578|ref|ZP_15513572.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363995297|gb|EHM16515.1| preprotein translocase subunit SecA [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392239181|gb|EIV64674.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
CCUG 48898]
Length = 929
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 165/364 (45%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVSLKPEELIASGEYG--------EADELSPEDLKAALLDDAKK----- 742
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G +R+ +IL++ +E Y+ Y+
Sbjct: 743 -AYKAREAEI--------DGLAGEGS-------MRQLERNILLSVIDRKWREHLYEMDYL 786
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE + +R+ R+PL EY+ +G F +ML +
Sbjct: 787 KE--------------------------GIGLRAMAQRDPLVEYQREGYDMFSAMLDGLK 820
Query: 868 RLTV 871
+V
Sbjct: 821 EESV 824
>gi|414583621|ref|ZP_11440761.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-1215]
gi|420880106|ref|ZP_15343473.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0304]
gi|420886926|ref|ZP_15350286.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0421]
gi|420891371|ref|ZP_15354718.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0422]
gi|420897670|ref|ZP_15361009.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0708]
gi|420902906|ref|ZP_15366237.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0817]
gi|420906981|ref|ZP_15370299.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-1212]
gi|420973347|ref|ZP_15436538.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0921]
gi|392078631|gb|EIU04458.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0422]
gi|392082689|gb|EIU08515.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0421]
gi|392085015|gb|EIU10840.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0304]
gi|392096982|gb|EIU22777.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0708]
gi|392100267|gb|EIU26061.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0817]
gi|392104885|gb|EIU30671.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-1212]
gi|392118773|gb|EIU44541.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-1215]
gi|392161230|gb|EIU86920.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
5S-0921]
Length = 929
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 165/364 (45%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVSLKPEELIASGEYG--------EADELSPEDLKAALLDDAKK----- 742
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G +R+ +IL++ +E Y+ Y+
Sbjct: 743 -AYKAREAEI--------DGLAGEGS-------MRQLERNILLSVIDRKWREHLYEMDYL 786
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE + +R+ R+PL EY+ +G F +ML +
Sbjct: 787 KE--------------------------GIGLRAMAQRDPLVEYQREGYDMFSAMLDGLK 820
Query: 868 RLTV 871
+V
Sbjct: 821 EESV 824
>gi|397680168|ref|YP_006521703.1| protein translocase subunit SecA 1 [Mycobacterium massiliense str.
GO 06]
gi|395458433|gb|AFN64096.1| Protein translocase subunit SecA 1 [Mycobacterium massiliense str.
GO 06]
Length = 852
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 168/364 (46%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E+ EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVSLKPEELIASGEYG--------EVDELSPEDLKAALLDDAKK----- 742
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G R
Sbjct: 743 -AYKAREAEI--------DGLAGEGSMR-------------------------------- 761
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
++ER +L+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +ML +
Sbjct: 762 -QLERNILLSVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFSAMLDGLK 820
Query: 868 RLTV 871
+V
Sbjct: 821 EESV 824
>gi|407277815|ref|ZP_11106285.1| preprotein translocase subunit SecA [Rhodococcus sp. P14]
Length = 947
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYPVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIADEGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR LGL +I G+ P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 140 WMGRVHRSLGLETAVILSGLTPAERRTAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKKDVHYEVDIKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y+RD YIVR+G+ +I+
Sbjct: 257 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYQRDKDYIVRDGEVIIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRILVGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN P +R D + T K+ +V G+PVL+G+
Sbjct: 377 EAAELHQIYELGVIPIPTNKPMVRADQGDLIYKTETAKFAAVVDDVAERHAKGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++GIPHNVLNA K+ +EA +A+AGR A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSAQFTKRGIPHNVLNA--KFHEQEATIIAEAGRSGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 495 LGGNPDILA 503
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 162/350 (46%), Gaps = 68/350 (19%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
+ +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F+ +
Sbjct: 539 DADKVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--FNGA 596
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+++R+ +D+PIE + + + Q E+ F IRK+++++DEV+ QR +YD
Sbjct: 597 ALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDEVMNQQRTVIYD 656
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGK 703
R+ IL G E Q+ + ++ +++ VD Y W L++L +
Sbjct: 657 ERRRILRG--EDLEGQV----EHMITDVVTAYVDGATAEGYVEDWDLEQLWTALRTLYPV 710
Query: 704 ILD--DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL 761
LD +L G+ S EEL E D + Y RR++
Sbjct: 711 GLDHKELATSADGEPADLSREELREALLKDAHAAY-------------ARREAE------ 751
Query: 762 AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDC 821
D + G R L R+ L +L + +E Y+ Y+KE
Sbjct: 752 ---IDAIAGEGGMR---ELERRVLLSVLDRKW----REHLYEMDYLKE------------ 789
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ R+PL EY+ +G F+ ML + +V
Sbjct: 790 --------------GIGLRAMAQRDPLVEYQREGYDMFVGMLEGLKEESV 825
>gi|161353730|ref|YP_706264.2| preprotein translocase subunit SecA [Rhodococcus jostii RHA1]
gi|166918868|sp|Q0S2Y0.2|SECA_RHOSR RecName: Full=Protein translocase subunit SecA
Length = 955
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 285/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 82 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 202 G---HSFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR G+ +I+
Sbjct: 259 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVREGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 379 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 70/362 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 590 ELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 648 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 701
Query: 693 L---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L LK + G +L G+T + +EL E D ++ Y
Sbjct: 702 LWTALKTLYPV-GVDYKELVGDGDGETNDITADELRETLLTDAHDAY------------- 747
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
RR++ D + G R L R+ L +L + +E Y+ Y+KE
Sbjct: 748 ARREAE---------IDGVAGAGSMR---ELERRVLLSVLDRKW----REHLYEMDYLKE 791
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ +R+ R+PL EY+ +G F ML +
Sbjct: 792 --------------------------GIGLRAMAQRDPLVEYQREGFDMFGGMLEGLKEE 825
Query: 870 TV 871
+V
Sbjct: 826 SV 827
>gi|146296347|ref|YP_001180118.1| preprotein translocase subunit SecA [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|172046021|sp|A4XJ42.1|SECA_CALS8 RecName: Full=Protein translocase subunit SecA
gi|145409923|gb|ABP66927.1| preprotein translocase, SecA subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 848
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 285/438 (65%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EERR Y CD+TY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLTSEERRKAYNCDVTYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTTGYDYIVNEKRHTVALTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESRTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K+E +
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVE 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK++GI H VLNA K+ +EA +A+AG+K
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKRGIKHEVLNA--KHHEKEAMIIAKAGQKG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 157/359 (43%), Gaps = 69/359 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKRLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L G N I + +VD I HP W I G + D
Sbjct: 630 RRKVLEGEN--LRDSILNMIDELVDYKIKVYTGESPHPDDWD----------IKGLLQDL 677
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F + G EL+ D N
Sbjct: 678 KFIFLDG-----------ELSEQDARNM-------------------------------- 694
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
T + L++ L I YL QE M+E+ER VL++ +D W DH+
Sbjct: 695 ---------TKDELKEKLISIAKEKYLKKEQEV---GELMRELERVVLLRVVDMHWMDHI 742
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQE 886
+++L +++R+ G ++P+ E++ + F M+ + T++ ++ M +E
Sbjct: 743 DAVDQLREGISLRAIGQKDPIVEFRFEAFEMFDQMIKRIQEDTIKIILHANVENMPKRE 801
>gi|420917669|ref|ZP_15380972.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0125-S]
gi|420922833|ref|ZP_15386129.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0728-S]
gi|421035760|ref|ZP_15498778.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0930-S]
gi|392110560|gb|EIU36330.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0125-S]
gi|392127486|gb|EIU53236.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0728-S]
gi|392224255|gb|EIV49776.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0930-S]
Length = 917
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 66 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 126 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 186 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 242
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR G+ LI+
Sbjct: 243 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVREGEVLIV 302
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 303 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 362
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 363 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 422
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 423 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 480
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 481 LGGNPDFLADKHLREQGL 498
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 165/364 (45%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 515 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 571
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 572 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 629
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 630 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 683
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E EL+ D+ D K
Sbjct: 684 DALWTALKTLYPVSLKPEELIASGEYG--------EADELSPEDLKAALLEDAKK----- 730
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G +R+ +IL++ +E Y+ Y+
Sbjct: 731 -AYKAREAEI--------DGLAGEGS-------MRQLERNILLSVIDRKWREHLYEMDYL 774
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE + +R+ R+PL EY+ +G F +ML +
Sbjct: 775 KE--------------------------GIGLRAMAQRDPLVEYQREGYDMFTAMLDGLK 808
Query: 868 RLTV 871
+V
Sbjct: 809 EESV 812
>gi|118579193|ref|YP_900443.1| preprotein translocase subunit SecA [Pelobacter propionicus DSM
2379]
gi|166918841|sp|A1AM15.1|SECA_PELPD RecName: Full=Protein translocase subunit SecA
gi|118501903|gb|ABK98385.1| protein translocase subunit secA [Pelobacter propionicus DSM 2379]
Length = 896
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 290/450 (64%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G I+EMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHSGKISEMKTGEGKTLVATLPAYLNAISGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGL+VG+I G+ ++RR NY DITY N+E GFDYLRDN+ + + V
Sbjct: 141 EWMGRLYSFLGLTVGVIVHGVEDDQRRINYAADITYGTNNEFGFDYLRDNMKFSLDDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R F+FAIVDEVDS+LIDE R PL+ISG +Y V ++ LL +G
Sbjct: 201 R---GFNFAIVDEVDSILIDEARTPLIISGPTEDSTDKYYVIDRIIPLLKKGEVKEEEAN 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+T++ K S LTE+G+ E L+ ++L+D N + AL+A
Sbjct: 258 TLSGKRKLYTGDFTIDEKAKSATLTEQGVLKVEKLLKVDNLYDPRNIEFLHHTQQALRAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
YRRDV Y+V++G+ +I++E TGR+ RRWS+G+HQA+EAKEG+ I+ ++ +A IT+
Sbjct: 318 AMYRRDVDYVVKDGEVMIVDEFTGRLMPGRRWSDGLHQAIEAKEGVTIENENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KL GMTGTA TE +EF K++++ V+ +PTN P +R D P + T R K+
Sbjct: 378 QNYFRMYKKLGGMTGTADTEAEEFHKIYKLDVVVIPTNRPLLRPDFPDVIYKTEREKFGA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
Q+++ + G+P LVG+ S+E SE LS+LLK++GIPHNVLNA K REAE V+QAG
Sbjct: 438 VIQDIKEHYATGQPCLVGTISIEKSEVLSELLKREGIPHNVLNA--KQHEREAEIVSQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
R AITI+TNMAGRGTDI+LGGN LA +
Sbjct: 496 RLKAITIATNMAGRGTDILLGGNADALASQ 525
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 14/168 (8%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y ++LK+ + C+ E EV RLGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 538 YQAILKNYKTVCAAEHDEVVRLGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLS 597
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI-----SAEKYYFGIR 627
L+D++ + F + +S+I + + EG+AI ++ I E + F IR
Sbjct: 598 LEDDLLRIF------GSERVSKIMDFLKIE-EGEAITHAMINKSIENAQKKVEAHNFDIR 650
Query: 628 KSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
K L+E+D+V+ QR+ +Y R+ IL G + + + + V+EI+
Sbjct: 651 KHLIEYDDVMNKQREVIYTQRREILGG--QDIRESFLEMLDETVEEIV 696
>gi|441515837|ref|ZP_20997626.1| protein translocase subunit SecA [Gordonia amicalis NBRC 100051]
gi|441449394|dbj|GAC55587.1| protein translocase subunit SecA [Gordonia amicalis NBRC 100051]
Length = 937
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 287/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQLMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM RR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSSSARREAYAADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HAYAIVDEVDSILIDEARTPLIISGPAEGSSKWYTEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE ++RD YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFQRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P +R D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNRPMVRKDQGDLIYKTEEAKFAAVVDDIVERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK++ IPHNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLKKREIPHNVLNA--KFHEQEAQIIAEAGRLRAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 166/347 (47%), Gaps = 65/347 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
++E V++ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+
Sbjct: 534 ATDEAEAVRKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNG 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ +SR+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 594 GALEAI--MSRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNEQRKI 649
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAI 700
+Y R+ IL G E +Q+ Q ++D+++ VD Y W LD+L +
Sbjct: 650 IYAERRQILEG--EDHHEQVKQ----MIDDVVSAYVDGATAEGYAEDWDLDELWTALRTL 703
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
LD + G+T E ++++ ++ D K++ KR
Sbjct: 704 YPIELDP--KAVVGET---EYGERDDISAEELRETLVADA------------KAAYDKRE 746
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLD 820
AI D+L G R L R L L+V+ D +Y
Sbjct: 747 QAI--DELAGEGAMR---QLERSVL--------LSVLDRKWRDHLY-------------- 779
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
M+ L +++RS R+P+ EY+ +G F ML +
Sbjct: 780 --------EMDYLREGIHLRSMAQRDPVVEYQREGFDMFTGMLEGLK 818
>gi|354585138|ref|ZP_09004028.1| preprotein translocase, SecA subunit [Paenibacillus lactis 154]
gi|353189158|gb|EHB54670.1| preprotein translocase, SecA subunit [Paenibacillus lactis 154]
Length = 837
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/422 (48%), Positives = 286/422 (67%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD+E
Sbjct: 81 RHYDVQLVGGMALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VGL GM E++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYNFLGMTVGLNLSGMEHPEKQHAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+LIDE R PL+ISG+A K Y A + + LV YTV++K
Sbjct: 201 ---PLYFCIIDEVDSILIDEARTPLIISGQAQKSTELYYAADRFVKRLVPEEDYTVDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE+G+A AE ++L+D N ++ ALKA RRDV Y+V + + +I+
Sbjct: 258 KSVSLTEKGVATAERIFGIDNLYDHNHVTLNHHIVQALKANVIMRRDVDYVVTDDEVVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKEG+++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKEGIEVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN R+D+P + + GK+ E+ + +PVLVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNRPNQRIDMPDVVYKSEEGKFRAVVNEIVERHKKNQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG+ ++TI+TNMAGRGTDI+
Sbjct: 438 VSIENSERLSEMLKRKGVQHKVLNA--KYHAEEAEIISRAGQPGSVTIATNMAGRGTDIL 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 109/181 (60%), Gaps = 10/181 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ +GGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GDGVQEIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGTDN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLNMMERLGFEEDQPIESKMITRAVESAQKRVEGNNFDMRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ IL +E Q + ++ V++ ++ + D + P W L + I K+LD
Sbjct: 615 RREIL--ESEDIKQIVVDMIKPVIERVVEAHCSDDI--PENWDLQDVAD---YINSKLLD 667
Query: 707 D 707
+
Sbjct: 668 E 668
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
++E E+ ++++ +D W DH+ M++L +++R++G +PL EY+ +G F +M++
Sbjct: 708 VREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMIAT 766
>gi|302865517|ref|YP_003834154.1| preprotein translocase subunit SecA [Micromonospora aurantiaca ATCC
27029]
gi|315502065|ref|YP_004080952.1| preprotein translocase, seca subunit [Micromonospora sp. L5]
gi|302568376|gb|ADL44578.1| preprotein translocase, SecA subunit [Micromonospora aurantiaca
ATCC 27029]
gi|315408684|gb|ADU06801.1| preprotein translocase, SecA subunit [Micromonospora sp. L5]
Length = 966
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 291/442 (65%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+IAEMKT V+TVNDYLA+RDA
Sbjct: 80 RPYDVQVMGGAALHFGNIAEMKTGEGKTLTSVMPVYLNALAGKGVHVITVNDYLAERDAA 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH FLGL VG++ E R+ Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHEFLGLQVGVVLPNRPASEHRAAYECDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
FA+VDEVDS+LIDE R PL+ISG A Y A V L G Y V
Sbjct: 200 G---HFFAVVDEVDSILIDEARTPLIISGPAEHSARWYQEFAAVVARLQPGTDGEGDYEV 256
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ ++ +TE G+A E L ++L++ N P ++ NA+KAKE Y+RD YIV +G+
Sbjct: 257 DYAKRTIAITERGVAKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELYKRDKDYIVNDGE 316
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTG
Sbjct: 317 VLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKQENQTLATITLQNYFRLYEKLSGMTG 376
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF K++++ V+ +PT+ P +R+D P + T + K+ +++ G+PV
Sbjct: 377 TAQTEAGEFNKVYKVGVVTIPTHRPMVRLDRPDVIYKTEKAKFNAVVEDIAERHVQGQPV 436
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVENSE LS +L+++GIPH+VLNA K+ A+EAE VAQAGRK A+T++TNMAGRG
Sbjct: 437 LVGTVSVENSEILSHMLRRRGIPHSVLNA--KFHAKEAEIVAQAGRKGAVTVATNMAGRG 494
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGNP+ LA + R L
Sbjct: 495 TDILLGGNPEFLAANELRQRGL 516
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 116/209 (55%), Gaps = 15/209 (7%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E EV GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SLQDE+ ++F
Sbjct: 540 CDVEAEEVAAAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLQDELMKRFRA 599
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
AV + R ED+PIE + RQ+ Q E IRK+++++DEVL QR+
Sbjct: 600 GAVEAV--MDRFNIPEDVPIESKMVTRQIRSAQAQIEGQNAEIRKNVLKYDEVLNKQRQV 657
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R +L G E S Q+ + VV + G + W LD+L LK+ +
Sbjct: 658 IYAERLRVLNG--EDLSDQVRNMIDDVVTAYVVGATSD-GYAEDWDLDQLWSSLKQLYPV 714
Query: 701 AGKILDDL------FAGISGDTLLKSIEE 723
G +++L +GI D LL ++E
Sbjct: 715 -GITVEELEEEVGSRSGIDQDFLLARLKE 742
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++ER VL++ +D WR+HL M+ L +++R++ R+P+ EY+ +G F SM+
Sbjct: 760 VRQLERMVLLQVIDRKWREHLYEMDYLQEGISLRAYAQRDPVIEYQREGFDMFASMMDGI 819
Query: 867 RRLTV 871
+ TV
Sbjct: 820 KEETV 824
>gi|169630660|ref|YP_001704309.1| preprotein translocase subunit SecA [Mycobacterium abscessus ATCC
19977]
gi|419709126|ref|ZP_14236594.1| preprotein translocase subunit SecA [Mycobacterium abscessus M93]
gi|419715202|ref|ZP_14242608.1| preprotein translocase subunit SecA [Mycobacterium abscessus M94]
gi|420865071|ref|ZP_15328460.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0303]
gi|420869861|ref|ZP_15333243.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0726-RA]
gi|420874306|ref|ZP_15337682.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0726-RB]
gi|420911212|ref|ZP_15374524.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0125-R]
gi|420928494|ref|ZP_15391774.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-1108]
gi|420968102|ref|ZP_15431306.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0810-R]
gi|420978835|ref|ZP_15442012.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0212]
gi|420984218|ref|ZP_15447385.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0728-R]
gi|420988997|ref|ZP_15452153.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0206]
gi|421008848|ref|ZP_15471958.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0119-R]
gi|421014269|ref|ZP_15477345.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0122-R]
gi|421019133|ref|ZP_15482190.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0122-S]
gi|421024313|ref|ZP_15487357.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0731]
gi|421030564|ref|ZP_15493595.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0930-R]
gi|421041365|ref|ZP_15504373.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0116-R]
gi|421044659|ref|ZP_15507659.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0116-S]
gi|169242627|emb|CAM63655.1| Preprotein translocase secA 1 subunit [Mycobacterium abscessus]
gi|382943007|gb|EIC67321.1| preprotein translocase subunit SecA [Mycobacterium abscessus M93]
gi|382944615|gb|EIC68922.1| preprotein translocase subunit SecA [Mycobacterium abscessus M94]
gi|392063787|gb|EIT89636.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0303]
gi|392065781|gb|EIT91629.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0726-RB]
gi|392069331|gb|EIT95178.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0726-RA]
gi|392113206|gb|EIU38975.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0125-R]
gi|392129612|gb|EIU55359.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-1108]
gi|392163113|gb|EIU88802.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0212]
gi|392169214|gb|EIU94892.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
6G-0728-R]
gi|392183276|gb|EIV08927.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0206]
gi|392196996|gb|EIV22612.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0119-R]
gi|392198546|gb|EIV24157.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0122-R]
gi|392207763|gb|EIV33340.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0122-S]
gi|392211110|gb|EIV36676.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0731]
gi|392222293|gb|EIV47816.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0116-R]
gi|392223784|gb|EIV49306.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0930-R]
gi|392234112|gb|EIV59610.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
4S-0116-S]
gi|392250609|gb|EIV76083.1| preprotein translocase, SecA subunit [Mycobacterium abscessus
3A-0810-R]
Length = 929
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVREGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 165/364 (45%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVSLKPEELIASGEYG--------EADELSPEDLKAALLEDAKK----- 742
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G +R+ +IL++ +E Y+ Y+
Sbjct: 743 -AYKAREAEI--------DGLAGEGS-------MRQLERNILLSVIDRKWREHLYEMDYL 786
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE + +R+ R+PL EY+ +G F +ML +
Sbjct: 787 KE--------------------------GIGLRAMAQRDPLVEYQREGYDMFTAMLDGLK 820
Query: 868 RLTV 871
+V
Sbjct: 821 EESV 824
>gi|312199835|ref|YP_004019896.1| Preprotein translocase subunit SecA [Frankia sp. EuI1c]
gi|311231171|gb|ADP84026.1| preprotein translocase, SecA subunit [Frankia sp. EuI1c]
Length = 979
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G+IAEMKT +VTVNDYLAQRDAE
Sbjct: 80 RHYDVQIMGGAALHLGNIAEMKTGEGKTLVSTLPAYLNALAGNGVHIVTVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL++G+I M P RR Y CDITY N+E GFDYLRDN+A + E+LV R
Sbjct: 140 NMGRVHRFLGLTIGVIHPQMPPAARRQQYACDITYGTNNEFGFDYLRDNMAWSGEELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG + + Y ++++ L + + Y VE
Sbjct: 200 G---HFFAVVDEVDSILIDEARTPLIISGPSDQPTRWYTEFSRISPTLKRDVDYEVEEGK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TE G+ E L +L++ N P ++ NALKAKE Y+RD YIV +G+ LI+
Sbjct: 257 RTVAITESGVEKVEDQLGIENLYESVNTPLVGYLNNALKAKELYKRDKDYIVVDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEFTGRVLHGRRYSEGMHQAIEAKENVEIKQENQTLATITLQNYFRLYEKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D P + T K++ ++ G+PVLVG+
Sbjct: 377 EAAEFHQIYKLGVVPIPTNKPMIREDQPDVVYKTEVAKFDAVVDDIAERHENGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+ H VLNA K REA VA+AGR+ A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKQLTKRGVRHEVLNA--KNHEREALIVAEAGRRAAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A+ + R L
Sbjct: 495 LGGNPEFIAQGELRGRGL 512
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E +V GGL+V+GT HESRRIDNQLRGRAGRQGD G +RF +SL D
Sbjct: 528 ALEKAKSSVKAEHDDVLEAGGLYVLGTERHESRRIDNQLRGRAGRQGDVGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ S ++ R+ ED+PIE + R + Q E F IRK+++++DE
Sbjct: 588 DLMR--LFNASAVEGIMDRLQIPEDVPIESKIVTRAIRSAQTQVESQNFEIRKNVLKYDE 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
V+ QR +Y+ R+ +L GA+ +Q+ ++ V + G
Sbjct: 646 VMNKQRTVIYEERRKVLEGAD--LHEQVRHFVDDTVTAYVEG 685
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ G R+PL EY+ +G F +M+
Sbjct: 757 MRELERRVVLAVLDKKWREHLYEMDYLQEGIGLRAMGQRDPLVEYQREGYTMFQTMMDGI 816
Query: 867 RRLTVESL 874
+ +V L
Sbjct: 817 KEESVRLL 824
>gi|213964964|ref|ZP_03393163.1| preprotein translocase, SecA subunit [Corynebacterium amycolatum
SK46]
gi|213952500|gb|EEB63883.1| preprotein translocase, SecA subunit [Corynebacterium amycolatum
SK46]
Length = 900
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 284/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQ++GGA LH G++AEM T VVTVNDYLA+RDAE
Sbjct: 80 KHFRVQVMGGAALHFGNVAEMGTGEGKTLTCVLPAYLNALAGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I + P++RR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHRFLGLETSVILSELSPDQRRKAYAADITYGTNNEFGFDYLRDNMAHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFAIVDEVDS+LIDE R PL+ISG A D Y +K+ + + +HY V+ +
Sbjct: 200 G---HHFAIVDEVDSILIDEARTPLIISGPADGDPHWYLAFSKIVPRMKRDIHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L +L+ EN ++ NALKAKE + RD YI+RNG+ LI+
Sbjct: 257 RTIGIREEGVEFVEDQLGIANLYAPENSSLVSYLNNALKAKELFTRDKDYIIRNGEILIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+ ++ +A +T Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRVLAGRRYNEGMHQAIEAKEGVEIKNENQTLATVTLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +P N P R DLP + T K+ +++ G+PVLVG+
Sbjct: 377 EAAELHQIYKLNVMAIPPNRPKQREDLPDLIYKTQEAKFAAVVEDIRECHEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GIPH+VLNA K+ +EAE VA AGR +T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKLLQREGIPHSVLNA--KHHEKEAEIVAVAGRLGGVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 495 LGGNPDIIA 503
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 163/359 (45%), Gaps = 71/359 (19%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
E +V+ GGL+V+GT HESRRIDNQLRGR GRQGDPG TRF +S++D++ +F+
Sbjct: 535 QSKEEADKVREAGGLYVLGTERHESRRIDNQLRGRTGRQGDPGVTRFYLSMRDDLMVRFN 594
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
A L++ + +D+PI+ + + +Q E F IRK+++++DEV+ QRK
Sbjct: 595 GQRMEA--LMNTLNVPDDVPIDSKVVSNSIKSVQAQVESQNFEIRKNVLKYDEVMNQQRK 652
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIA 699
+Y R+ IL G E Q+ VVD + G + W LD+L L++ +
Sbjct: 653 VIYAERRRILEG--EDLKTQVRDMQDDVVDAYVNGATAD-GYVEDWDLDELWNALEQLYS 709
Query: 700 ---IAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS 756
A +++D G GD S +EL + DI+ Y
Sbjct: 710 PTFTAQELIDGSDFGTPGDL---SADELSKALHTDISASY------------------DQ 748
Query: 757 LKRWL-AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVL 815
L+ + AI DD +N +ER +
Sbjct: 749 LEDAVSAIGGDDQMRN--------------------------------------IERFTI 770
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ +D WR+HL M+ L + +R+ +PL EY+ +G F +M+ + +V L
Sbjct: 771 LNVMDQKWREHLYEMDYLKEGIGLRAMAQADPLVEYQREGYDMFTAMMDGIKEESVRQL 829
>gi|294102409|ref|YP_003554267.1| preprotein translocase subunit SecA [Aminobacterium colombiense DSM
12261]
gi|293617389|gb|ADE57543.1| preprotein translocase, SecA subunit [Aminobacterium colombiense
DSM 12261]
Length = 891
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/466 (46%), Positives = 299/466 (64%), Gaps = 39/466 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH+G I EMKT VVTVNDYLA+RDA
Sbjct: 81 LRHFDVQLMGGMALHEGKITEMKTGEGKTLVATLAVVLNALSGNGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RFLGLSV I M +ER+ Y D+TY NSE GFDYLRDN+A +QLV
Sbjct: 141 EWMGPIYRFLGLSVKCIYAYMDQKERKEAYLSDVTYGTNSEFGFDYLRDNMAVAKDQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HF IVDEVDS+LIDE R PL+ISG + +V Y A ++A L +G + + K
Sbjct: 201 RG---HHFCIVDEVDSILIDEARTPLIISGPSEDNVEMYTTADQIARQLKEGRDFEKDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V TE+GIA E L+ L+ + N A ++ A+KA +++DV Y+V++G+ +
Sbjct: 258 ERNVAFTEDGIARCENLLKMPGLFSDAANSDLAHRIVQAVKAHVLFQKDVHYVVKDGEII 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE +++ +S +A IT Q+ F++Y KL+GMTGTA
Sbjct: 318 IVDEFTGRLMFGRRYSDGLHQAIEAKEKVRVGRESQTLATITLQNYFRMYRKLAGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF +++ + VI VPTN P +R D P + T+ K+ +EVE + G+PVLV
Sbjct: 378 VTESEEFKEIYGLDVIVVPTNKPMVRSDFPDVIYRTSLEKFHAVAEEVEETYSNGQPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ENSE +S LLK + IPH VLNA KY +EA+ VAQAGR A+T++TNMAGRGTD
Sbjct: 438 GTTSIENSERISKLLKARKIPHQVLNA--KYHEKEAQIVAQAGRFGAVTVATNMAGRGTD 495
Query: 396 IILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIK 441
I+LGGNP LAK+ + R+ NVE D + ++L E +
Sbjct: 496 IVLGGNPDFLAKETL---------RKEGNVEDLDPSKYQQLLEEYR 532
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 498 KQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGR 557
K+ + L P+ Y +L++ C+ E EV GGL +IGT HESRRIDNQLRGR
Sbjct: 512 KEGNVEDLDPS---KYQQLLEEYRQICAKERDEVLDKGGLKIIGTERHESRRIDNQLRGR 568
Query: 558 AGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQI 617
+GRQGDPGS+RF +SL+D++ + F + + + ++ +E IE + + + + Q
Sbjct: 569 SGRQGDPGSSRFYLSLEDDLLRLFGSERIQGI--MEKLGMEEGEAIEHNLLTKAIESAQK 626
Query: 618 SAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGAN 656
E+ +F IR+ L+ +D V+ QR+ VY R IL N
Sbjct: 627 KVEQMHFDIRRQLLSYDNVMNQQREAVYGERHRILEDKN 665
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
E+ R +++ TLD W+DHL+ M+ L + +R+ G ++PL EY+ + F SM+ R
Sbjct: 751 ELMRFIVLHTLDTSWKDHLLAMDELRRGIGLRAIGQKDPLLEYQFESYNLFQSMMGRVR 809
>gi|311743639|ref|ZP_07717445.1| preprotein translocase subunit SecA [Aeromicrobium marinum DSM
15272]
gi|311312769|gb|EFQ82680.1| preprotein translocase subunit SecA [Aeromicrobium marinum DSM
15272]
Length = 911
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/429 (50%), Positives = 280/429 (65%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQIIGGA LH G+IAEMKT VVTVNDYLA+ E
Sbjct: 81 RHFDVQIIGGAALHLGNIAEMKTGEGKTLVSTLPVYLNALAGRGVHVVTVNDYLAKYQGE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLS+G I M PE RR+ Y CDITY N+ELGFDYLRDN+A+ V R
Sbjct: 141 WMGRVHRFLGLSIGTIMPSMTPEARRAAYACDITYATNNELGFDYLRDNMASELASCVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG ++V Y +++ + + Y V+ K
Sbjct: 201 ---GHFFAVVDEVDSILIDEARTPLIISGPTQEEVKWYGEFSRIIGRMTIDVDYEVDEKK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ +TEEGI E AL ++L+D N P F+ NA+KAKE +R+D Y+V +G +I+
Sbjct: 258 RTISVTEEGIDKVEDALGIDNLYDSVNTPLIGFLNNAIKAKELFRKDKDYVVIDGNVIIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E RR++EG+HQA+EAKEG++I+ + +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 318 DEHTGRILEGRRYNEGLHQAIEAKEGVRIREEYQTLATITLQNYFRLYEKLSGMTGTAMT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF K++ + V+ V TN P RVD P + T K+E Q++ G+P+LVG+
Sbjct: 378 EASEFDKIYGLGVVPVRTNKPVARVDQPDLVYRTEDAKFEAVAQDILDRHAAGQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSV SE LS LL+Q+G+ H VLNA K REA VA AG K A+T++TNMAGRGTDI+
Sbjct: 438 TSVAKSERLSTLLRQRGVAHEVLNA--KQHEREAAIVAMAGHKGAVTVATNMAGRGTDIM 495
Query: 398 LGGNPKMLA 406
LGGN + LA
Sbjct: 496 LGGNVEFLA 504
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 98/167 (58%), Gaps = 6/167 (3%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV LGGL VIGT HESRRIDNQLRGR+GRQGDPG TRF +SL+D++ + F D
Sbjct: 540 EHDEVTALGGLAVIGTERHESRRIDNQLRGRSGRQGDPGETRFYLSLEDDLMRLFKAD-- 597
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
W ++ R+ +D+PIE + + Q E F RK+++++D+V+ QR+ +Y
Sbjct: 598 WVNFVLQRLNIPDDVPIENKRVTGAIASAQGQVETQNFESRKNILKYDDVMSRQREVIYT 657
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ +L G E + + + VV + G D + P W LD+L
Sbjct: 658 ERRRVLEG--EDLQEWVRTMIAQVVTAYVAGATDGV--PEQWDLDQL 700
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 771 NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
GR T L L D A+Y +E+ +E+ER V++ LD WR+HL M
Sbjct: 722 GGRSGLTRESLTTSLTDDAWAAYGR--READLGSTVTRELERKVVLSVLDRKWREHLYEM 779
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ L + +R++ R+PL EY+ +G F +M+ + +V
Sbjct: 780 DYLREGIGLRAYSQRDPLVEYQREGFDLFSTMMEGIQEESV 820
>gi|418421685|ref|ZP_12994858.1| preprotein translocase subunit SecA [Mycobacterium abscessus subsp.
bolletii BD]
gi|363995601|gb|EHM16818.1| preprotein translocase subunit SecA [Mycobacterium abscessus subsp.
bolletii BD]
Length = 929
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE + RD YIVR G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVREGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAGIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 165/366 (45%), Gaps = 76/366 (20%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIE--ELPELNSIDINNFYFPDLPKPPN 745
D L LK ++ + + L+ S E E EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVS----------LKPEELIASSEYGEADELSPEDLKAALLDDAKK--- 742
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
R + + + D L G +R+ +IL++ +E Y+
Sbjct: 743 ---AYRAREAEI--------DGLAGEGS-------MRQLERNILLSVIDRKWREHLYEMD 784
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
Y+KE + +R+ R+PL EY+ +G F +ML
Sbjct: 785 YLKE--------------------------GIGLRAMAQRDPLVEYQREGYDMFTAMLDG 818
Query: 866 TRRLTV 871
+ +V
Sbjct: 819 LKEESV 824
>gi|302872500|ref|YP_003841136.1| preprotein translocase subunit SecA [Caldicellulosiruptor
obsidiansis OB47]
gi|302575359|gb|ADL43150.1| preprotein translocase, SecA subunit [Caldicellulosiruptor
obsidiansis OB47]
Length = 848
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLARRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLTHEERKKAYHCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVGNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K++ Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFDAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG+K
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQKG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G N I + +VD I HP W + LL++
Sbjct: 630 RRKVLEGEN--LRDSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDL 677
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPVVEFRFEAFEMFDEMIKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANVENMPQRE 801
>gi|110822822|gb|ABG98106.1| preprotein translocase [Rhodococcus jostii RHA1]
Length = 939
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 285/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 66 RHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P ERR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 126 WMGRVHRFLGLDTSVILSGMSPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 186 G---HSFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKRDVHYEVDIRK 242
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR G+ +I+
Sbjct: 243 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVREGEVIIV 302
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 303 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 362
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 363 EAAELHQIYNLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHEKGQPVLIGT 422
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 423 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEQEAQIIAEAGRSGAVTVATNMAGRGTDVV 480
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 481 LGGNPDIIA 489
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 70/362 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 514 VLDQVKAEVKADADKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 573
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + +++R+ +D+PIE + + + Q E+ F IRK+++++DE
Sbjct: 574 ELMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYDE 631
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
V+ QR +Y+ R+ IL G + ++ ++ +++ VD Y W L++
Sbjct: 632 VMNQQRTVIYNERRQILEGKDMEGQ------VEKMITDVVTAYVDGATAEGYVEDWDLEQ 685
Query: 693 L---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L LK + G +L G+T + +EL E D ++ Y
Sbjct: 686 LWTALKTLYPV-GVDYKELVGDGDGETNDITADELRETLLTDAHDAY------------- 731
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
RR++ D + G R L R+ L +L + +E Y+ Y+KE
Sbjct: 732 ARREAE---------IDGVAGAGSMR---ELERRVLLSVLDRKW----REHLYEMDYLKE 775
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ +R+ R+PL EY+ +G F ML +
Sbjct: 776 --------------------------GIGLRAMAQRDPLVEYQREGFDMFGGMLEGLKEE 809
Query: 870 TV 871
+V
Sbjct: 810 SV 811
>gi|453366301|dbj|GAC78076.1| protein translocase subunit SecA [Gordonia malaquae NBRC 108250]
Length = 916
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 287/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSPDQRRVAYAADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+L+DE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 ---GHNFAVVDEVDSILVDEARTPLIISGPADSSSKWYGEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+A E L ++L++ EN ++ NA+K KE + RD YIVRNG +I+
Sbjct: 255 KTVGVHEAGVAFVEDRLGIDNLYEPENSQLVGYLNNAIKVKELFHRDKDYIVRNGDVMIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY LSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDTLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN R D + T K++ +V R G+PVL+G+
Sbjct: 375 EAAEFQQIYKLGVVTIPTNRVMARKDRADLIYKTEEAKFDAVVDDVVERHREGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L + G+ H+VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRKLAEAGVDHSVLNA--KFHEQEAQIVAEAGRLNAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDVIA 501
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 180/357 (50%), Gaps = 69/357 (19%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
++E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 AASEADEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFN- 592
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ +++R+ ED+PIE + R + Q E+ F IRK+++++DEV+ QRK
Sbjct: 593 -GAALETIMNRVNLPEDVPIEAKMVTRAIRSAQTQVEEQNFEIRKNVLKYDEVMNSQRKV 651
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAI 700
+Y R+ IL G E +QI + +V +++ D Y W L+
Sbjct: 652 IYGERREILEG--EDHREQI----RTMVGDVVGAYADGATAEGYAEDWDLE--------- 696
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL-FRGIRRKSSSLKR 759
TL +++EL P L ++ + ++ R
Sbjct: 697 ---------------TLWTALKEL-----------------YPITLDYKDVVGETDEGDR 724
Query: 760 WLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE--SRYDDVYMKEVERAVLVK 817
DD++++ LR+ L D +A+Y V+E D M ++ER+VL+
Sbjct: 725 ------DDISRDE--------LREKLVDDALAAYDKRVEEIVGVAGDSGMADLERSVLLS 770
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
LD WRDHL M+ L +++RS R+P+ EY+ +G F +ML A + TV L
Sbjct: 771 VLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFTAMLDAMKEETVSIL 827
>gi|6458272|gb|AAF10155.1|AE001916_1 preprotein translocase, SecA subunit [Deinococcus radiodurans R1]
Length = 877
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/450 (48%), Positives = 286/450 (63%), Gaps = 39/450 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+D Q+IGGA LH G IAEM+T +VTVNDYLA+ E
Sbjct: 89 RHYDTQLIGGAALHQGRIAEMRTGEGKTLVATLALAFNALEGKGCHLVTVNDYLARVGME 148
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGL+VGL R + P E+++ Y CDITY NSELGFDYLRDN+A + E LV+R
Sbjct: 149 EMGLLYRTLGLTVGLANRELSPAEKQAAYACDITYVTNSELGFDYLRDNMAQSKEALVLR 208
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P H+AIVDEVDS+LIDE R PL+ISG A K Y V AK+ L +G
Sbjct: 209 ADTPLHYAIVDEVDSILIDEARTPLIISGAAEKATDLYYVFAKLIRRLQKGEPAEPGVRT 268
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YT+E K+ +V LTE+GI E L DL+ EN A + A++A+E Y R+
Sbjct: 269 EPTGDYTIEEKSKAVHLTEQGITKIERLLSLKDLYSPENMDKAHMITQAIRARELYHREK 328
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +I++E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 329 DYIVNAEGEVVIVDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRL 388
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEFL ++ V+ +PTN P IRVD + T GK+ EV+
Sbjct: 389 YDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNKPVIRVDSDDLIYRTRMGKYAAVVGEVQ 448
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
M GRP+L+G+ S+E SE LS LL+Q G+ H VLNA K+ A+EA +AQAGR +T
Sbjct: 449 EMHATGRPILIGTASIETSEQLSSLLQQAGVQHAVLNA--KFEAQEASIIAQAGRSGTVT 506
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRL 414
I+TNMAGRGTDI+LGGN + + + IE +L
Sbjct: 507 IATNMAGRGTDIMLGGNDEYIIGESIEQQL 536
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 69/363 (19%)
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
P + L ++ ++ + V+ LGGLH++GT HESRRIDNQLRGRAGRQGDPGS
Sbjct: 567 PGITLDFIRQAQELHRATVEDRQRVRDLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGS 626
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
+RF VS +D++ + F+ D V ++ R+ D+ PIE + + Q E FGI
Sbjct: 627 SRFYVSFEDDLMRLFAND--RVVGMMDRLGMDDSQPIEAKMVTGAIEKAQARVEDRNFGI 684
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK L+EFD V+ QR +Y R+ +L G +E + + VD +
Sbjct: 685 RKQLLEFDNVMSKQRDEIYAQRREVLLGPDEDIEETTEGMIGDFVDSQLAAYAPIEVSHE 744
Query: 687 YWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
W +++L +E +P L + D +
Sbjct: 745 QWDIEQLRSAM-----------------------VEAVPALETFDFESLR---------- 771
Query: 747 FRGIRRKSSSLKRWLAICSD--DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD 804
+ + + R L+ +D D K N L +Y
Sbjct: 772 ---VNSPAEAQDRLLSAVADAFDARKEELSPTMMNSLARY-------------------- 808
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
VL++ +D W++HL M+ L + +R +G R+P EYK + F M+
Sbjct: 809 ---------VLLQVVDQHWKEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATNMFNEMID 859
Query: 865 ATR 867
A +
Sbjct: 860 ALK 862
>gi|330465927|ref|YP_004403670.1| preprotein translocase subunit SecA [Verrucosispora maris
AB-18-032]
gi|328808898|gb|AEB43070.1| preprotein translocase, SecA subunit [Verrucosispora maris
AB-18-032]
Length = 962
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/442 (48%), Positives = 292/442 (66%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+IAEMKT VVTVNDYLAQRDA
Sbjct: 66 RPYDVQVMGGAALHFGNIAEMKTGEGKTLTSVMPVYLNALSGKGVHVVTVNDYLAQRDAA 125
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH+FLGL+VG++ E R+ Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 126 WMGRVHQFLGLTVGVVLPNRPASEHRAAYECDITYGTNNEFGFDYLRDNMAWSKDELVQR 185
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FA+VDEVDS+LIDE R PL+ISG A Y A V L G Y V
Sbjct: 186 G---HNFAVVDEVDSILIDEARTPLIISGPAEHSARWYGEFAAVVARLQAGKDGEGDYEV 242
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ ++ +TE G+A E L ++L++ N P ++ NA+KAKE Y+RD YIV +G+
Sbjct: 243 DYAKRTIAVTERGVAKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELYKRDKDYIVSDGE 302
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTG
Sbjct: 303 VLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKQENQTLATITLQNYFRLYDKLSGMTG 362
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF K++++ V+ +PT+ P +R D + T + K+ +++ + G+PV
Sbjct: 363 TAQTEAGEFNKVYKVGVVTIPTHRPMVRQDRADVIYKTEKAKFNAVIEDIAERHQAGQPV 422
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVENSE LS LL+++GIPH+VLNA K+ AREAE VAQAGRK A+T++TNMAGRG
Sbjct: 423 LVGTVSVENSEILSQLLRRRGIPHSVLNA--KFHAREAEIVAQAGRKGAVTVATNMAGRG 480
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGN + LA + R L
Sbjct: 481 TDILLGGNAEFLAASELRQRGL 502
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 16/197 (8%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQDE+ ++F AV + R
Sbjct: 537 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDELMKRFRSGAVEAV--MER 594
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
ED+PIE + RQ+ Q E IRK+++++DEV+ QR+ +Y R +L G
Sbjct: 595 FNIPEDVPIESKMVTRQIKSAQAQIEGQNAEIRKNVLKYDEVMNQQRQVIYAERLRVLNG 654
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILDDL--- 708
E S+Q+ + V++ + G + W L++L LK+ + G ++++
Sbjct: 655 --EDLSEQVRNMIDDVIEAYVQGATSE-NYAEEWDLEQLWASLKQLYPV-GITIEEMEEE 710
Query: 709 ----FAGISGDTLLKSI 721
AGI D L+ +
Sbjct: 711 AGGSRAGIDADFLISRL 727
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+++ER VL++ +D WR+HL M+ L + +R++ R+P+ EY+ +G F +M+ +
Sbjct: 748 RQLERMVLLQVIDRKWREHLYEMDYLQEGITLRAYAQRDPVVEYQREGFAMFATMMEGIK 807
Query: 868 RLTV 871
TV
Sbjct: 808 EETV 811
>gi|162448299|ref|YP_001610666.1| preprotein translocase subunit SecA [Sorangium cellulosum So ce56]
gi|189046612|sp|A9GI17.1|SECA_SORC5 RecName: Full=Protein translocase subunit SecA
gi|161158881|emb|CAN90186.1| preprotein translocase SecA subunit [Sorangium cellulosum So ce56]
Length = 1011
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/437 (49%), Positives = 284/437 (64%), Gaps = 35/437 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH+G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHYDVQLIGGMVLHNGCIAEMRTGEGKTLVATLPCYLNALEGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLS G++ E+R YRCDITY N+E GFDYLRDN+ ++ +
Sbjct: 141 EWMGKLYGFLGLSTGVVVNQQGDAEKRHAYRCDITYGQNNEFGFDYLRDNMKFSALEYAQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG+ + +Y +V L HY ++ K
Sbjct: 201 R---PLHYAIVDEVDSILIDEARTPLIISGQGERSSDKYRTINEVIPQLRNEEHYALDEK 257
Query: 158 NNSVELTEEGIALAE------MALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVR 210
+SV LT+EG+ AE L+ +L+D + ++N L+A Y+RDV Y+VR
Sbjct: 258 AHSVTLTDEGVETAERLLASLQVLKGTNLYDPVNLETLHILNQCLRAHTLYKRDVNYMVR 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK LII+E TGRV RRWS+G+HQAVEAKE ++IQ +S +A IT+Q+LF+LY KLSG
Sbjct: 318 DGKVLIIDEFTGRVLAGRRWSDGLHQAVEAKENVRIQEESRTMATITFQNLFRLYKKLSG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF +++ + +PTN P +R D + T + K+ E+ LG
Sbjct: 378 MTGTADTEAAEFHSTYKLDCVIIPTNKPVVRKDYEDLVYKTEKEKFTAVINEILEKHELG 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+P+LVG+TSVE S +S +L ++G+ HNVLNA K+ EA VAQAGRK AIT+STNMA
Sbjct: 438 QPILVGTTSVEKSTAISRILAKRGVKHNVLNA--KHHENEAYVVAQAGRKGAITVSTNMA 495
Query: 391 GRGTDIILGGNPKMLAK 407
GRGTDIILGGN +MLAK
Sbjct: 496 GRGTDIILGGNAEMLAK 512
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 131/228 (57%), Gaps = 6/228 (2%)
Query: 427 VDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKSFFSESVEMSQS 486
V+ T+ ++L+ K G L AK YV G+ + + ++
Sbjct: 447 VEKSTAISRILA--KRGVKHNVLNAKHHENEAYVVAQAGRKGAITVSTNMAGRGTDIILG 504
Query: 487 MNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHE 546
N + L KL K+ P A + +++++ + C+ EG E++ +GGL+++GT HE
Sbjct: 505 GNAEMLAKLKFKEQNRQPEAEPEA--FEALVEEIKKECTAEGDEIREIGGLYILGTERHE 562
Query: 547 SRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGD 606
SRRIDNQLRGRAGRQGDPG+++F +SL+D++ + F+ D +L+ R+ +D PIE
Sbjct: 563 SRRIDNQLRGRAGRQGDPGTSKFYLSLEDDLMRIFAGDR--VKNLMERMGMPDDEPIEHP 620
Query: 607 AIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + + Q E+ F IRK+L+E+D+V+ QRK +YD+RQS+L G
Sbjct: 621 WVTKSVENAQKKVEERNFDIRKNLLEYDDVMSAQRKTIYDMRQSLLVG 668
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
R + ++ LD W DHL +M+ L + +R +G ++P +EYK +G F++M++
Sbjct: 870 RHLYLEELDKAWVDHLTDMDHLRDGIGLRGYGQKDPKQEYKKEGYNMFVNMVA 922
>gi|399047323|ref|ZP_10739382.1| preprotein translocase, SecA subunit [Brevibacillus sp. CF112]
gi|433543810|ref|ZP_20500208.1| preprotein translocase SecA subunit [Brevibacillus agri BAB-2500]
gi|398054760|gb|EJL46870.1| preprotein translocase, SecA subunit [Brevibacillus sp. CF112]
gi|432184897|gb|ELK42400.1| preprotein translocase SecA subunit [Brevibacillus agri BAB-2500]
Length = 839
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/427 (48%), Positives = 287/427 (67%), Gaps = 37/427 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL +G IAEMKT VVTVN+YLA+RD+
Sbjct: 80 MRHFDVQLIGGMVLQEGRIAEMKTGEGKTLVATLATYLNALLGKGVHVVTVNEYLAERDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++ FLGL+VGL + G+ PEE+R+ Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 RIMGQLYNFLGLTVGLNKNGLSPEEKRAAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P FAI+DEVDS+LIDE R PL+ISG A+K Y + + + L +T++ K
Sbjct: 200 R---PLFFAIIDEVDSILIDEARTPLIISGSANKSTELYYICSHFVKRLEPEKDFTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-----ALKAKEFYRRDVQYIVRNG 212
V LT+EG+ E A ++L+D A +N ALKA+ ++RDV Y+V+ G
Sbjct: 257 LKIVNLTDEGVGKVEKAFNIDNLYD----TAHITLNHHITAALKAQVLFKRDVDYVVQEG 312
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ +I++E TGR+ RR+S+G+HQA+EAKEGL++Q++S+ +A IT Q+ F++Y KL+GMT
Sbjct: 313 EVVIVDEFTGRLMVGRRYSDGLHQAIEAKEGLRVQSESMTLATITLQNYFRMYEKLAGMT 372
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTAKTEE+EF K++ + V+ +PTN P IR DLP F T K+ ++ + G+P
Sbjct: 373 GTAKTEEEEFKKIYGLDVVVIPTNKPVIRQDLPDLVFKTEAAKYRAVVNDIVERHKKGQP 432
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
+LVG+ S+ENSE LS +LKQ+G+PH+VLNA K+ REAE VA+AG+ A+TI+TNMAGR
Sbjct: 433 ILVGTISIENSERLSHMLKQKGVPHSVLNA--KHHEREAEIVARAGQYGAVTIATNMAGR 490
Query: 393 GTDIILG 399
GTDI LG
Sbjct: 491 GTDIQLG 497
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S+QDE+ ++F D
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSMQDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +EDMPIE + R + Q E F RK ++++D+V+ QR VY
Sbjct: 555 IMNMMDRLGMEEDMPIESRLVTRAVESAQKRVEGANFDARKGVLQYDDVMNQQRLVVYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ IL E+ S + +V++ + + + P W L L
Sbjct: 615 RKDILE--QENLSDVALNMIYSVLERAVEQHCPKEEVPEDWDLQAL 658
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E E+ V+++ +D W DH+ M++L +++R++ +PL EY+ +G + +ML++
Sbjct: 708 MREFEKVVILRAVDSKWMDHIDAMDQLRQGIHLRAYAQNDPLREYQFEGYEMYQAMLASV 767
Query: 867 RRLTVESLVQYWSSPMESQEL 887
+ E + Y SQ L
Sbjct: 768 Q----EEVAMYIMKAEVSQNL 784
>gi|326383268|ref|ZP_08204956.1| preprotein translocase subunit SecA [Gordonia neofelifaecis NRRL
B-59395]
gi|326198018|gb|EGD55204.1| preprotein translocase subunit SecA [Gordonia neofelifaecis NRRL
B-59395]
Length = 923
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNALDGRGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A E LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSPDQRREAYAADITYGTNNEFGFDYLRDNMAHTLEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+L+DE R PL+ISG A Y A++A LL + +HY +++K
Sbjct: 198 ---EHAYAIVDEVDSILVDEARTPLIISGPADSSSKWYSEFARIAPLLDKDVHYEIDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+A E L ++L++ EN ++ NA+K KE + +D YIVR G+ +I+
Sbjct: 255 KTVGVHEAGVAFVEDRLGIDNLYEPENSQLVGYLNNAIKVKELFHKDKDYIVRKGEVMIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ G+PVL+G+
Sbjct: 375 EAAEFQQIYKLGVVPIPTNRPLIRKDQTDLIYKTEEAKFHAVVDDIAERNAAGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++ I H VLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSHLLSEREIKHTVLNA--KFHEQEAQIVAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDVIA 501
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 105/170 (61%), Gaps = 5/170 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
++E +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 534 AASEADDVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 591
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + +++R+ +D+PI+ + R + Q E+ F IRK+++++DEV+ QRK
Sbjct: 592 NGAALETIMARLNLPDDVPIDAKMVTRAIRSAQTQVEEQNFEIRKNVLKYDEVMNEQRKV 651
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R+ IL G E +Q+ + + VV + L + W +DKL
Sbjct: 652 IYGERREILEG--EDHKEQVREMVSDVVGAYADAATE-LGYAEDWDIDKL 698
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D M+++ER++L+ +D WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 757 DGAMRQLERSILLTVMDRKWRDHLYEMDYLREGIHLRSVAQRDPVVEYQREGYDMFQRML 816
Query: 864 SATRRLTVESLVQYWSSPMESQ 885
A + E++ +++ +E+Q
Sbjct: 817 EAMKE---EAVTYIFNAQVETQ 835
>gi|302390247|ref|YP_003826068.1| protein translocase subunit secA [Thermosediminibacter oceani DSM
16646]
gi|302200875|gb|ADL08445.1| protein translocase subunit secA [Thermosediminibacter oceani DSM
16646]
Length = 833
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 284/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ++GG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 80 MRPFDVQVMGGIVLHQGRIAEMKTGEGKTLVATMPAYLNALTGRGVHVVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++FLGL VGLI G+ EER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 EWMGSIYKFLGLEVGLIVHGLDYEERKRAYNADITYGTNNEFGFDYLRDNMVLFKEHMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISG+A + Y A+ L G Y V+ K
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGQAEESTDIYYKFARFVPRLKPGEDYVVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV TE+GI AE L ++L+DE N ALKA +RD Y+V++G+ +I
Sbjct: 257 ARSVIPTEKGIKKAEEFLGVSNLYDEENMELLHHFHQALKAHALMKRDRDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 317 VDEFTGRLMYGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYKKLAGMTGTAA 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ M V+ +PTN P IRVD P + T + K++ +E+E +R G+PVLVG
Sbjct: 377 TEEEEFRKIYGMDVVVIPTNKPMIRVDYPDVVYKTEKAKFQAVVREIEDCYRRGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS++LK++GIPH VLNA KY +EAE +A+AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIEKSEMLSEMLKKRGIPHQVLNA--KYHEKEAEIIAKAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 178/356 (50%), Gaps = 69/356 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF VSL+D++ + F D+
Sbjct: 497 GEGVAELGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFYVSLEDDLMRLFGSDSIK 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ ++D PIE I R + Q E F IRK ++EFD+V+ QR+ +Y
Sbjct: 557 G--LMDRLGLEDDQPIEHPLITRAIENAQKKVEARNFDIRKHVLEFDDVMNTQREVIYSQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L E+ I Q ++ VV+ ++ HP W L K L E+ A D
Sbjct: 615 RRKVLE--QENLKDSIKQMIEDVVNRLLDIYAAKEIHPEEWDL-KGLAEYYA-------D 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+F +K + LN+I+ P+
Sbjct: 665 IFT-------IKDV-----LNAIN------PE---------------------------- 678
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
T +R+ L D + +Y +E+ D M+E+E+ +++K +D W DH+
Sbjct: 679 -------ETTREEIRRLLVDRALEAYER--KEAEIGDETMRELEKVIMLKVVDQKWMDHI 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSP 881
M++L + +R++G R+PL EYKI+G F M+ + + T+ L VQ ++P
Sbjct: 730 DAMDQLREGIGLRAYGQRDPLVEYKIEGYEMFQEMIKSIQEDTLRYLFRVQLKTAP 785
>gi|161579493|ref|NP_294298.2| preprotein translocase subunit SecA [Deinococcus radiodurans R1]
gi|172044686|sp|Q9RWU0.2|SECA_DEIRA RecName: Full=Protein translocase subunit SecA
Length = 868
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/450 (48%), Positives = 286/450 (63%), Gaps = 39/450 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+D Q+IGGA LH G IAEM+T +VTVNDYLA+ E
Sbjct: 80 RHYDTQLIGGAALHQGRIAEMRTGEGKTLVATLALAFNALEGKGCHLVTVNDYLARVGME 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++R LGL+VGL R + P E+++ Y CDITY NSELGFDYLRDN+A + E LV+R
Sbjct: 140 EMGLLYRTLGLTVGLANRELSPAEKQAAYACDITYVTNSELGFDYLRDNMAQSKEALVLR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
P H+AIVDEVDS+LIDE R PL+ISG A K Y V AK+ L +G
Sbjct: 200 ADTPLHYAIVDEVDSILIDEARTPLIISGAAEKATDLYYVFAKLIRRLQKGEPAEPGVRT 259
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
YT+E K+ +V LTE+GI E L DL+ EN A + A++A+E Y R+
Sbjct: 260 EPTGDYTIEEKSKAVHLTEQGITKIERLLSLKDLYSPENMDKAHMITQAIRARELYHREK 319
Query: 206 QYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV G+ +I++E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 320 DYIVNAEGEVVIVDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRL 379
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEFL ++ V+ +PTN P IRVD + T GK+ EV+
Sbjct: 380 YDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNKPVIRVDSDDLIYRTRMGKYAAVVGEVQ 439
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAIT 384
M GRP+L+G+ S+E SE LS LL+Q G+ H VLNA K+ A+EA +AQAGR +T
Sbjct: 440 EMHATGRPILIGTASIETSEQLSSLLQQAGVQHAVLNA--KFEAQEASIIAQAGRSGTVT 497
Query: 385 ISTNMAGRGTDIILGGNPKMLAKKIIEDRL 414
I+TNMAGRGTDI+LGGN + + + IE +L
Sbjct: 498 IATNMAGRGTDIMLGGNDEYIIGESIEQQL 527
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 69/363 (19%)
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
P + L ++ ++ + V+ LGGLH++GT HESRRIDNQLRGRAGRQGDPGS
Sbjct: 558 PGITLDFIRQAQELHRATVEDRQRVRDLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGS 617
Query: 567 TRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGI 626
+RF VS +D++ + F+ D V ++ R+ D+ PIE + + Q E FGI
Sbjct: 618 SRFYVSFEDDLMRLFAND--RVVGMMDRLGMDDSQPIEAKMVTGAIEKAQARVEDRNFGI 675
Query: 627 RKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 686
RK L+EFD V+ QR +Y R+ +L G +E + + VD +
Sbjct: 676 RKQLLEFDNVMSKQRDEIYAQRREVLLGPDEDIEETTEGMIGDFVDSQLAAYAPIEVSHE 735
Query: 687 YWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
W +++L +E +P L + D +
Sbjct: 736 QWDIEQLRSAM-----------------------VEAVPALETFDFESLR---------- 762
Query: 747 FRGIRRKSSSLKRWLAICSD--DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD 804
+ + + R L+ +D D K N L +Y
Sbjct: 763 ---VNSPAEAQDRLLSAVADAFDARKEELSPTMMNSLARY-------------------- 799
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
VL++ +D W++HL M+ L + +R +G R+P EYK + F M+
Sbjct: 800 ---------VLLQVVDQHWKEHLHGMDVLRQGIGLRGYGQRDPFTEYKFEATNMFNEMID 850
Query: 865 ATR 867
A +
Sbjct: 851 ALK 853
>gi|27262432|gb|AAN87497.1| protein translocase subunit SecA [Heliobacillus mobilis]
Length = 570
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 279/422 (66%), Gaps = 29/422 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 79 MRHFDVQLIGGMVLHQGRIAEMKTGEGKTLVATLPSYLNGLTGRGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R+HRFLGL VGLI G+ ERR +Y DITY N+E GFDYLRDN+ +V
Sbjct: 139 ELMGRIHRFLGLKVGLIVHGLDFAERRESYAADITYGTNNEFGFDYLRDNMVNQPHHMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+L+DE R PL+ISG A K +Y A++ L + Y V+ K
Sbjct: 199 R---ELNFAIVDEVDSILVDEARTPLIISGPADKPTEKYYTVARLVPRLKNEVDYKVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+S LTEEG+ E L ++L D N WA V LKA +RD +Y+V++G+ +I+
Sbjct: 256 AHSATLTEEGVEKVEKILGIDNLAD-NMEWAHHVNCGLKAYALMKRDKEYVVKDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEGLKIQ +S +A IT Q+ F++Y KLSGMTGTA+T
Sbjct: 315 DEFTGRMMFGRRYSEGLHQAIEAKEGLKIQNESQTLATITLQNYFRMYNKLSGMTGTART 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF+++++M V+ +PTN P IR D+P + T GK+ +++ G+PVLVG+
Sbjct: 375 EEDEFIEIYKMDVVAIPTNKPVIREDVPDVVYRTEEGKFNAVVEDIIEAHEKGQPVLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SE+LS+ LK++G+ H VLNA KY +EAE + AG++ +TI+TNMAGRGTDII
Sbjct: 435 VSIEKSEHLSEKLKRRGVSHQVLNA--KYHEKEAEIIKNAGQRGMVTIATNMAGRGTDII 492
Query: 398 LG 399
LG
Sbjct: 493 LG 494
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V GGL+VIGT HE+RRIDNQLRGR+GRQGDPG +RF VSL+D++ + F + +
Sbjct: 494 GEGVPEAGGLYVIGTERHEARRIDNQLRGRSGRQGDPGKSRFYVSLEDDLMRLFGAE-NI 552
Query: 588 AVDLISRITNDEDMPIE 604
VD I R+ D+ MP++
Sbjct: 553 QVDWI-RLGMDDSMPLD 568
>gi|374340371|ref|YP_005097107.1| Preprotein translocase subunit SecA [Marinitoga piezophila KA3]
gi|372101905|gb|AEX85809.1| preprotein translocase, SecA subunit [Marinitoga piezophila KA3]
Length = 816
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/423 (49%), Positives = 283/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEMKT + T NDYLA+RDA
Sbjct: 78 MRHFDVQLMGGIALHEGNIAEMKTGEGKTLVATLAVYLNALTGKGVHLATHNDYLAKRDA 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM ++ FLGLSVG IQ GM +R+ Y+CDITY +E GFDYLRDNL + E V
Sbjct: 138 QWMGPIYEFLGLSVGFIQAGMETADRKKAYQCDITYGTANEFGFDYLRDNLVYDLEDKVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDE DS+LIDE R PL+ISG + Y A +A L + +T++ K
Sbjct: 198 R---GHHYAIVDEADSILIDEARTPLIISGPSDTPSHLYTKFAGIARKLKKDEDFTLDEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT+EGI+ E L ++L+D +N + +NALKA ++RRD YI+++G+ +I
Sbjct: 255 GKAVILTDEGISKLEKMLGIDNLYDPKNIHFLFHTLNALKALYYFRRDKDYIIQDGEVII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S+ A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 315 VDEFTGRLMHGRRYSEGLHQAIEAKEGVKVKEESLTYATITFQNYFRMYEKLAGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ V+ +PTN P IR D F T + KW E++ ++ G+P+LVG
Sbjct: 375 TEEDEFKQIYNCDVVVIPTNKPVIRKDQNDLIFRTQKEKWNAVVSEIKERYKKGQPMLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK++GIPHNVLNA KY +EAE VAQAG+K ITI+TNMAGRGTDI
Sbjct: 435 TTSIETSELLSSMLKKEGIPHNVLNA--KYHEKEAEIVAQAGQKGMITIATNMAGRGTDI 492
Query: 397 ILG 399
LG
Sbjct: 493 KLG 495
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL+VIGT HESRRIDNQL GR+GRQGDPG +RF +S +D++ + F +
Sbjct: 495 GEGVVELGGLYVIGTERHESRRIDNQLIGRSGRQGDPGESRFFLSFEDDLLRLFGGEKLK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ +I + E PIE + + + Q E +F IRK L E D +++ QR +Y
Sbjct: 555 SIMGALKIQDGE--PIEHGLLSKIIKDAQKRVEGIHFSIRKRLFELDSIMDYQRSSIYAH 612
Query: 648 RQSILT-GANESCSQQIFQYMQAVVDEII 675
R IL+ G + ++IF + VVD II
Sbjct: 613 RDWILSQGDYDDHLKEIF---EDVVDRII 638
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 40/70 (57%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
K++ + ++++ +D WR HL + L AV++R++G ++P E+K + F +++
Sbjct: 697 FKKIAKFIMLRIIDERWRKHLEAIEHLKEAVSLRAYGQKDPTMEFKKESYIMFEELINNI 756
Query: 867 RRLTVESLVQ 876
TV L++
Sbjct: 757 YDDTVSYLLR 766
>gi|418247276|ref|ZP_12873662.1| preprotein translocase subunit SecA [Mycobacterium abscessus 47J26]
gi|420953216|ref|ZP_15416458.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0626]
gi|420957390|ref|ZP_15420625.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0107]
gi|420963517|ref|ZP_15426741.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-1231]
gi|420993336|ref|ZP_15456482.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0307]
gi|420999111|ref|ZP_15462246.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0912-R]
gi|421003633|ref|ZP_15466755.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0912-S]
gi|353451769|gb|EHC00163.1| preprotein translocase subunit SecA [Mycobacterium abscessus 47J26]
gi|392152129|gb|EIU77836.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0626]
gi|392177893|gb|EIV03546.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0912-R]
gi|392179438|gb|EIV05090.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0307]
gi|392192336|gb|EIV17960.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0912-S]
gi|392246430|gb|EIV71907.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-1231]
gi|392251221|gb|EIV76694.1| preprotein translocase, SecA subunit [Mycobacterium massiliense
2B-0107]
Length = 929
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 RHFDVQVMGGAALHAGNIAEMKTGEGKTLTCVLPAYLNALAGKGTHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+ + ++LV R
Sbjct: 138 WMGRVHRFLGLDVGVILSQMTPLERRDAYNADITYGTNNEFGFDYLRDNMTHSLDELVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + HY V+++
Sbjct: 198 G---HAFAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARIVPLMEKDTHYEVDIRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L +L++ N P ++ NA+KAKE + RD YIVR+G+ LI+
Sbjct: 255 RTIGVHELGVEFVEDQLGIYNLYEAANSPLVSYLNNAIKAKELFTRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLMGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELNEIYKLGVVSIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEAAIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA K + ++ L
Sbjct: 493 LGGNPDFLADKHLREQGL 510
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 168/364 (46%), Gaps = 72/364 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L KD E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 LQKFKDA---AETEAKEVQEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 583
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
QDE+ ++ F+ + +++R+ +D+PIE + + Q E+ F +RK+++++
Sbjct: 584 QDELMRR--FNGAALETILTRMNVPDDVPIEAKMVTNAIKSAQTQVEQQNFEVRKNVLKY 641
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G E QI Q ++ + I VD Y W
Sbjct: 642 DEVMNQQRKVIYAERRRILDG--EDLQPQI----QEMITDTIAAYVDGATADGYHEDWDF 695
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLF 747
D L LK ++ K + + +G G E+ EL+ D+ D K
Sbjct: 696 DALWTALKTLYPVSLKPEELIASGEYG--------EVDELSPEDLKAALLDDAKK----- 742
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ + + + D L G R
Sbjct: 743 -AYKAREAEI--------DGLAGEGSMR-------------------------------- 761
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
++ER +L+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +ML +
Sbjct: 762 -QLERNILLSVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFSAMLDGLK 820
Query: 868 RLTV 871
+V
Sbjct: 821 EESV 824
>gi|222530071|ref|YP_002573953.1| preprotein translocase subunit SecA [Caldicellulosiruptor bescii
DSM 6725]
gi|222456918|gb|ACM61180.1| preprotein translocase, SecA subunit [Caldicellulosiruptor bescii
DSM 6725]
Length = 848
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLSHEERKKAYNCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTNGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K+E Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG++
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQRG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G E+ I + +VD I HP W + LL++
Sbjct: 630 RRKVLEG--ENLRDSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDL 677
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANVENMPQRE 801
>gi|144900461|emb|CAM77325.1| SecA protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 906
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/434 (50%), Positives = 288/434 (66%), Gaps = 37/434 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH+G IAEM+T VVTVNDYLAQRDAE
Sbjct: 82 RHFDVQLMGGMVLHNGKIAEMRTGEGKTLVATLAVYLNALTGAGVHVVTVNDYLAQRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+RFLGLSVG+I G+ ++RR+ Y CD+TY N+ELGFDYLRDN+ E++V R
Sbjct: 142 WMGRVYRFLGLSVGVIHHGLDDDQRRAAYGCDVTYGTNNELGFDYLRDNMKFRLEEMVHR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AIVDEVDS+LIDE R PL+ISG + Y + ++ LLV+G Y + K
Sbjct: 202 ---PFNYAIVDEVDSILIDEARTPLIISGPTEDNSDLYRLVDRIIPLLVEG-DYEKDEKQ 257
Query: 159 NSVELTEEGIALAEMAL-------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
+V LTE+G E L E +L+D N V AL+A + + +DV YIV+
Sbjct: 258 RAVTLTEQGTEHTEQLLVEAGLMKEGGNLYDITNVSLVHHVNQALRAHKLFTKDVDYIVK 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+ K +II+E TGR+ + RR+SEG+HQA+EAKEG+ IQ ++ +A IT+Q+LF+LYPKL+G
Sbjct: 318 SDKVVIIDEFTGRMMDGRRYSEGLHQALEAKEGVSIQNENQTLASITFQNLFRLYPKLAG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF +++ + V+++PTN P RVD + + TA K+E +E
Sbjct: 378 MTGTAMTEAGEFQEIYNLEVVDMPTNRPVSRVDADDEVYRTAAEKYEAIGTLIEECRTRK 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+TS+E SE LS+LLK++ IPH VLNAR Y +EA VAQAG A+TI+TNMA
Sbjct: 438 QPVLVGTTSIEKSELLSELLKKKNIPHQVLNAR--YHEQEAYIVAQAGVPGAVTIATNMA 495
Query: 391 GRGTDIILGGNPKM 404
GRGTDI LGGN M
Sbjct: 496 GRGTDIQLGGNLDM 509
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 176/380 (46%), Gaps = 86/380 (22%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
+K E +E GGL+VIGT HESRRIDNQLRGR+GRQGDPG+++F +SL+D+
Sbjct: 528 VKAIEAEIETFKAEAVAAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDD 587
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ RI E M D+++R+L GL+ + I K+L + E
Sbjct: 588 LM---------------RIFGSERM----DSMLRKL-GLKDGEAIIHPWINKALEKAQEK 627
Query: 637 LEVQRKHVYDLRQS------ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+E + +D+R++ ++ + +Q + MQ E + +V ++H
Sbjct: 628 VESRN---FDVRKNLLKFDDVMNDQRKVIYEQRKELMQV---EDVSDDVAAMRH------ 675
Query: 691 DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGI 750
+++ E +A A I + +A D S+ E ++ + DLP
Sbjct: 676 -EVIGELVARA--IPERAYAE---DWNTASLHE-------EVLRVFNLDLP--------- 713
Query: 751 RRKSSSLKRWL---AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+ W I ++ R+R T RK + + Y M
Sbjct: 714 ------IAEWAKEEGIADQEI----RHRVTDAADRKM-----------AAKAAEYTPEIM 752
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ VE+++L++ LD W++HL+ ++ L + +R++G R+PL EYK + F ML+ R
Sbjct: 753 RMVEKSLLLQILDQAWKEHLLQLDHLRQGIGLRAYGQRDPLNEYKREAFNLFEQMLNDLR 812
Query: 868 -RLT-VESLVQYWSSPMESQ 885
R+T V + V+ P ES+
Sbjct: 813 ERVTSVLAHVELRVGPSESE 832
>gi|357399608|ref|YP_004911533.1| translocase binding subunit (ATPase) [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|386355646|ref|YP_006053892.1| Preprotein translocase subunit SecA [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337766017|emb|CCB74728.1| translocase binding subunit (ATPase) [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365806154|gb|AEW94370.1| preprotein translocase, SecA subunit [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 924
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEM+T ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMRTGEGKTLVGTLPAYLNALSDKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLSVG I M P ERR Y CD+TY N+E GFDYLRDN+A + E+LV R
Sbjct: 140 WMGRVHRFLGLSVGCILANMTPAERREQYACDVTYGTNNEFGFDYLRDNMAWSKEELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y AK+ L Y V+ K
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADQATKWYSDFAKLVLRLKLDRDYEVDEKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG++ E L ++L++ N P F+ NA+KAKE Y+RD Y+V +G+ +I+
Sbjct: 257 RTVGVLEEGVSRVEDWLGIDNLYESVNTPLVGFLNNAIKAKELYKRDKDYVVMDGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG++IQ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEHTGRILAGRRYNEGMHQAIEAKEGVEIQNENQTLATITLQNFFRLYDKLSGMTGTALT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PT+ R+D P + T K+ +++ G+PVLVG+
Sbjct: 377 EAAEFYQIYKLGVVPIPTHRSVQRLDRPDLIYRTEEAKFAAVVEDIAEKHAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++G+PH VLNA K REA VAQAGRK A+T++TNMAGRGTDI
Sbjct: 437 TSVEKSEYLSQQLAKRGVPHEVLNA--KQHDREATIVAQAGRKGAVTVATNMAGRGTDIK 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA+ + R L
Sbjct: 495 LGGNPDDLAEAELRQRGL 512
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 528 ALERAEAAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F V ++ + + D+PIE + R + Q E+ F IRK+++++DE
Sbjct: 588 DLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFEIRKNVLKYDE 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
VL QR+ +Y R+ +L G E +QI +M +D+ + W L+KL
Sbjct: 646 VLNRQREVIYGERRRVLEG--EDLREQIVHFMDDTIDDYVKAETSE-GFAEEWDLEKLWS 702
Query: 696 EF 697
F
Sbjct: 703 AF 704
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +M+
Sbjct: 756 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQRDPLVEYQREGFDMFNAMMDGI 815
Query: 867 RRLTV 871
+ +V
Sbjct: 816 KEESV 820
>gi|312621633|ref|YP_004023246.1| preprotein translocase, seca subunit [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202100|gb|ADQ45427.1| preprotein translocase, SecA subunit [Caldicellulosiruptor
kronotskyensis 2002]
Length = 848
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLSHEERKKAYNCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPLYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTNGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K+E Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG++
Sbjct: 437 EIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQRG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKILSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G E+ I + +VD I HP W + LL++
Sbjct: 630 RRKVLEG--ENLRDSILGMIDELVDYKIKIYTGESPHPEDWDIKGLLQDL 677
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANVENMPQRE 801
>gi|295697363|ref|YP_003590601.1| preprotein translocase subunit SecA [Kyrpidia tusciae DSM 2912]
gi|295412965|gb|ADG07457.1| preprotein translocase, SecA subunit [Kyrpidia tusciae DSM 2912]
Length = 853
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/422 (50%), Positives = 278/422 (65%), Gaps = 29/422 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G +AEMKT VVTVNDYLA+RD+
Sbjct: 80 MRHFDVQLLGGIVLHQGRVAEMKTGEGKTLVATLPSYLNALAGQGVHVVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++HRFLGL+VGL GM +++ YR DITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 EWMGQIHRFLGLTVGLNIPGMTHGQKQEAYRADITYGTNNEFGFDYLRDNMVLQKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG A K Y A + + G YTV+ K
Sbjct: 200 R---PLHYAIVDEVDSILIDEARTPLIISGPAEKSTDLYVRANLLVANMKPGEDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE+G+ AE +L+D N + ALKA ++ D Y+V+NG+ +I
Sbjct: 257 AKSVTLTEQGVQKAERFFNIQNLYDHANVLIHHHITQALKAHGLFKLDRDYVVQNGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG++IQ +S +A IT Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMYGRRYSEGLHQAIEAKEGVRIQNESKTLATITLQNYFRMYKKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+E ++ M V+ +PTN P IR DLP + T K+ +E+ G+PVLVG
Sbjct: 377 TEEEELRSIYGMDVVVIPTNKPMIRTDLPDVVYKTEEAKFRAVVEEIVRRHATGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS++LK++GI H VLNA K+ REAE VA+AG + A+TI+TNMAGRGTDI
Sbjct: 437 TTSIEKSERLSEMLKKRGIRHQVLNA--KHHEREAEIVAKAGHRGAVTIATNMAGRGTDI 494
Query: 397 IL 398
IL
Sbjct: 495 IL 496
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 4/165 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F + + AV
Sbjct: 500 VAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLEDDLMRLFGSENTMAV- 558
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+ R+ +ED PIE + R + Q E F +RK ++++D+V+ QR+ +Y R+
Sbjct: 559 -MDRLGLEEDQPIESRLVTRAIESAQKKVEGNNFDLRKHVLKYDDVMNQQREIMYKQRRE 617
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
IL ++ + + ++ ++D ++ P W L LL+
Sbjct: 618 ILE--RDNLREIVVGMVEDLIDWMLDTYAPQDAIPEEWDLKGLLE 660
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M++ E+ VL++ +D W DH+ M+ L +++R++G R+PL EYK +G + F M+ +
Sbjct: 708 MRDFEKVVLLRAVDSKWMDHIDAMDHLRQGIHLRAYGQRDPLVEYKFEGFQMFEEMIHSI 767
Query: 867 R 867
R
Sbjct: 768 R 768
>gi|441520586|ref|ZP_21002252.1| protein translocase subunit SecA [Gordonia sihwensis NBRC 108236]
gi|441459746|dbj|GAC60213.1| protein translocase subunit SecA [Gordonia sihwensis NBRC 108236]
Length = 923
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 287/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNALNGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P++RR Y DITY N+E GFDYLRDN+A + E LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSPDQRREAYAADITYGTNNEFGFDYLRDNMAHSLEDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 ---EHAYAIVDEVDSILIDEARTPLIISGPADSSSKWYAEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G++ E L ++L++ EN ++ NA+K KE + +D YIVR G+ +I+
Sbjct: 255 KTVGVHEAGVSFVEDRLGIDNLYEPENSQLVGYLNNAIKVKELFHKDKDYIVRKGEVMIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYKKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ G+PVL+G+
Sbjct: 375 EAAEFQQIYKLGVVPIPTNRPLIRKDQTDLIYKTEEAKFYAVVDDIAERNAKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++ I H VLNA KY +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRLLTEREIKHTVLNA--KYHEQEAQIVAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDVIA 501
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 520 CEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQ 579
+ E +V+ +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ +
Sbjct: 530 ARTEAAKEADDVREVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMR 589
Query: 580 KFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEV 639
+ F+ + +++R+ +D+PI+ + R + Q E+ F IRK+++++DEV+
Sbjct: 590 R--FNGAALETIMARLNLPDDVPIDAKMVTRAIRSAQTQVEEQNFEIRKNVLKYDEVMNE 647
Query: 640 QRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
QRK +Y R+ IL G E Q+ + ++ VV + G + + + W L+ L
Sbjct: 648 QRKVIYGERREILEG--EDHRDQVREMVRDVVGAYVDGATE-VGYAEDWDLETL 698
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 781 LRKYLGDILIASYLNVVQE--SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVN 838
LR+ L D +A+Y +E D M+++ER++L+ +D WRDHL M+ L ++
Sbjct: 732 LREVLVDDALAAYDRREKELAEIAGDGAMRQLERSILLTVMDRKWRDHLYEMDYLREGIH 791
Query: 839 VRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQ 885
+RS R+P+ EY+ +G F ML + E++ +++ +E+Q
Sbjct: 792 LRSVAQRDPVVEYQREGYDMFQGMLEGMKE---EAVTYIFNAQVETQ 835
>gi|284048023|ref|YP_003398362.1| Preprotein translocase subunit SecA [Acidaminococcus fermentans DSM
20731]
gi|283952244|gb|ADB47047.1| preprotein translocase, SecA subunit [Acidaminococcus fermentans
DSM 20731]
Length = 825
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/424 (50%), Positives = 283/424 (66%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG +LH G+IAEM+T VVTVNDYLA+RD+
Sbjct: 81 LRHFDVQLIGGCILHRGNIAEMRTGEGKTLVATLPAYLNALEGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+RFLG+SVGLI M R++ Y DITY N+E GFDYLRDN+ + +Q+V
Sbjct: 141 EDMGRVYRFLGMSVGLIVHDMDFPARKAAYAADITYGTNNEFGFDYLRDNMVVSLDQMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG K Y + A V + + YTV+ K
Sbjct: 201 R---PLHYAIVDEVDSILIDEARTPLIISGPGEKSTDLYNIMADVVKNFKEKEDYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND--PWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V TE GIA AE L +++D + + +M ALKAK RD Y+V++G+ +
Sbjct: 258 LKTVAPTEAGIAKAEKLLGVKNMYDPENGTDLSHQLMEALKAKALMIRDRDYVVKDGEVI 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+SEG+HQA+EAKE +K++ +S +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 IVDEFTGRLMYGRRYSEGLHQAIEAKEHVKVERESQTLATITFQNYFRMYDKLSGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
KTEE+EF K++ + V VPTN PNIR+D P + T + K+ + +E + +GRPVLV
Sbjct: 378 KTEEQEFQKIYGLSVYVVPTNKPNIRIDYPDVIYKTKKAKYRAVVKAIEELHSVGRPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ SE LS +LK++GI HNVLNA KY +EAE VA AG+ A+TI+TNMAGRGTD
Sbjct: 438 GTTSIAQSEELSAMLKKKGIQHNVLNA--KYHEKEAEIVADAGQMGAVTIATNMAGRGTD 495
Query: 396 IILG 399
I LG
Sbjct: 496 ITLG 499
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 109/200 (54%), Gaps = 7/200 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR RQGDPGSTRF +SL+D++ + F D
Sbjct: 499 GEGVAELGGLHIIGTERHESRRIDNQLRGRCARQGDPGSTRFYLSLEDDLMRLFGSDNIS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ DED PIE + R + Q E F IRK ++E+D+V+ QR+ +YD
Sbjct: 559 GI--MDKLGMDEDEPIEHRLVTRSIENAQKKVESRNFDIRKHVLEYDDVMNEQREVIYDQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK---EFIAIAGKI 704
R+ IL A+ + + +VD + + W + L+K EF A G +
Sbjct: 617 RRKILEKAD--LKETVLGMADHIVDRTMDMYAPKEAYSEDWDIPSLIKYAEEFYAPQGSL 674
Query: 705 LDDLFAGISGDTLLKSIEEL 724
D A +S + L + + L
Sbjct: 675 KADELANMSREELEEHLHSL 694
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E V++K +D W +HL M+ L + +R++G R+PL EYK + F M A
Sbjct: 711 MRELENLVMLKVVDTHWMEHLDAMDALREGIGLRAYGQRDPLVEYKFEAYDMFEGMKEA- 769
Query: 867 RRLTVESLVQYW 878
V+ +V+Y
Sbjct: 770 ---IVDDVVRYM 778
>gi|312135786|ref|YP_004003124.1| preprotein translocase, seca subunit [Caldicellulosiruptor
owensensis OL]
gi|311775837|gb|ADQ05324.1| preprotein translocase, SecA subunit [Caldicellulosiruptor
owensensis OL]
Length = 848
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 284/438 (64%), Gaps = 44/438 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLARRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G+ EER+ Y CDITY N+E GFDYLRDN+A E+LV
Sbjct: 140 EWMGPIYNFLGLSVGVIVHGLTHEERKKAYNCDITYGTNNEFGFDYLRDNMAIYKEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AI+DEVDS+LIDE R PL+ISG A K Y A L
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADNFVRRLKPFYYNSDDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
G Y V K ++V LTEEGI AE +L D EN ++ ALKA
Sbjct: 257 QMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KL+GMTGTAKTEE+EF +++++ VIE+PT+ P IR+D P + + T + K++ Q
Sbjct: 377 FRLYKKLAGMTGTAKTEEQEFREIYKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFDAIVQ 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
E+ + G+PVLVG+ S+E SE LS++LK+ GI H VLNA K+ +EA +A+AG++
Sbjct: 437 EIVETHKKGQPVLVGTISIEKSEMLSEMLKKHGIKHEVLNA--KHHEKEAMIIAKAGQRG 494
Query: 382 AITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI+LG
Sbjct: 495 AVTIATNMAGRGTDIVLG 512
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F +
Sbjct: 512 GEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDDLMRLFG--SER 569
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ + +D PIE + + Q E F IRK L++FD+VL QR+ +Y
Sbjct: 570 IKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQ 629
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G E+ I + +VD I H W + LL++
Sbjct: 630 RRKVLEG--ENLRDSILGMIDEIVDYKIKVYTGESPHAEDWDIKGLLQDL 677
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D W +H+ + +L +++R+ G ++P+ E++ + F M+
Sbjct: 722 MRELERVVLLRVVDMHWIEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDDMIKRI 781
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ T++ ++ M +E
Sbjct: 782 QEDTIKIILHANIENMPQRE 801
>gi|149178698|ref|ZP_01857282.1| translocase [Planctomyces maris DSM 8797]
gi|148842473|gb|EDL56852.1| translocase [Planctomyces maris DSM 8797]
Length = 1182
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 277/429 (64%), Gaps = 28/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT----------------------VVTVNDYLAQRDAE 38
MRH+ VQ+IGG LH G IAEM T +VTVNDYLA RD E
Sbjct: 111 MRHYPVQMIGGYFLHKGMIAEMVTGEGKTLVSSLPAFLNALSGKVHIVTVNDYLALRDME 170
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +H LGL+VG IQ M PEER+ +Y CDITY N+E GFDYLRDN+ E V
Sbjct: 171 WMGPIHIALGLTVGAIQSKMGPEERQKHYGCDITYGTNNEFGFDYLRDNMKPVKELQVQ- 229
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P ++A+VDE+D++LIDE R PL+ISG A D+ +Y A VA L+ G + V+ K
Sbjct: 230 --GPLNYAVVDEIDNILIDEARTPLIISGPAQDDLTKYSKANSVALKLIPGTDFEVKEKE 287
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ LT+ G+ AE + N W + N+LKA Y+RDV Y+V+ G+ +I+
Sbjct: 288 HTCHLTDAGVKHAEELAGVESFYTAGNMEWPHLIDNSLKAHHLYKRDVNYVVQQGEVIIV 347
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGR+ R+W +G+HQAVEAKEG+KI+ +S +A IT Q+ FKLY KLSGMTGTA T
Sbjct: 348 DDHTGRLMPGRQWGDGLHQAVEAKEGVKIKEESQTLATITLQNFFKLYDKLSGMTGTAMT 407
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++Q+ V+ +PTN P R++ P + T + KW EV + + GRP+LVG+
Sbjct: 408 EAEEFWKIYQLDVVSIPTNRPMQRINHPDVIYQTEKEKWTAIADEVREVHKQGRPILVGT 467
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SE +S L + GIPHNVLNA K+ REAE +AQAGRK A+TI+TNMAGRGTDII
Sbjct: 468 VSIEQSEIVSHKLSKYGIPHNVLNA--KHHEREAEIIAQAGRKGAVTIATNMAGRGTDII 525
Query: 398 LGGNPKMLA 406
LGG+ + +A
Sbjct: 526 LGGSAEHIA 534
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV +LGGLHVIG+ H+SRRID QLRGR+GRQGDPGS+RF +SL+D++ + F+ +
Sbjct: 569 EAEEVMQLGGLHVIGSERHDSRRIDLQLRGRSGRQGDPGSSRFFLSLEDKLMRVFAGE-- 626
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
W +++SR+ +E IE + +++ G Q E+ +F RK L+E+DEV++ QRK VY
Sbjct: 627 WVKNILSRLGMEEGEAIESRMVSKRVEGAQKKREETHFEQRKHLLEYDEVMDEQRKTVYG 686
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDE 673
RQ IL G N C I + ++ VDE
Sbjct: 687 YRQRILDGCN--CRDLILEMIERQVDE 711
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+ + ER+++++ LD W+DHL M+ L S + + + ++P EY+ +G + F +M
Sbjct: 1034 LSQAERSLILEVLDTSWKDHLYYMDHLRSGIGLVGYAQKDPKVEYRREGMKAFDAM 1089
>gi|289523475|ref|ZP_06440329.1| preprotein translocase, SecA subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503167|gb|EFD24331.1| preprotein translocase, SecA subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 889
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 288/438 (65%), Gaps = 30/438 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++G LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 82 MRHFDVQVMGAIALHEGKIAEMKTGEGKTLVATMPVVLNALKGKGVHVVTVNDYLAKRDA 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGLSVG+I M EERR Y DITY NSE GFDYLRDN+A QLV
Sbjct: 142 EWMGKVYRFLGLSVGVIYPFMSIEERREAYEADITYGTNSEFGFDYLRDNMAILPSQLVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + V Y VA ++A+ L + ++ K
Sbjct: 202 RG---HHYAIVDEVDSILIDEARTPLIISGPSEESVEPYKVADRIAKSLTVNEDFEIDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V LTE GI E L D++ E ++ ALKA+ ++RDV Y++++G+ +
Sbjct: 259 EKNVALTEVGIKRCEKILGIEDIYAEVETSELLHKIVQALKARYLFKRDVHYVIKDGEVV 318
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKEG++I ++ +A IT Q+ F++Y KL+GMTGTA
Sbjct: 319 IVDEFTGRLMYGRRYSDGLHQAIEAKEGVRIGRENQTLATITLQNYFRMYEKLAGMTGTA 378
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF +++ + V+ +PT+ P IR D P + + R K+ E++ + +PVL+
Sbjct: 379 ATEAEEFNEIYGLEVVVIPTHKPMIRRDFPDIIYRSKREKFAAVADEIKECYEKRQPVLI 438
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ENSE LS LL + +PH VLNA KY +EA+ +AQAGR A+T++TNMAGRGTD
Sbjct: 439 GTTSIENSEKLSKLLSARHVPHQVLNA--KYHEKEAKIIAQAGRVGAVTVATNMAGRGTD 496
Query: 396 IILGGNPKMLAKKIIEDR 413
I+LGGNP+ LA + E R
Sbjct: 497 ILLGGNPEFLALEEAEKR 514
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
Y ++L++ + C E +V LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF +
Sbjct: 524 AYEAILEEYKSLCDEEHKKVVSLGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFYL 583
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D++ + F D + + ++ E I+ + R + Q E+Y+F IRK L+
Sbjct: 584 SLEDDLLRLFGSDRIQGI--MEKLGMQEGEAIDHPLLSRAIESAQKKVEQYHFDIRKQLL 641
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
++D V+ QR +YD R+ IL + + +Q + +DEI+
Sbjct: 642 QYDSVMNQQRIAIYDERRRILFA--DDLIEHTWQIITDTLDEIL 683
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +L+ +D W++HL+ M+ L + +R+ G ++PL EY+ + F ML + R
Sbjct: 755 KMILLHVVDSHWKEHLLAMDDLRRGIGLRALGQKDPLLEYQFESYNLFQQMLGSIR 810
>gi|404259054|ref|ZP_10962368.1| protein translocase subunit SecA [Gordonia namibiensis NBRC 108229]
gi|403402448|dbj|GAC00778.1| protein translocase subunit SecA [Gordonia namibiensis NBRC 108229]
Length = 939
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGEGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM RR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSSAARREAYAADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HAYAIVDEVDSILIDEARTPLIISGPAEGSSKWYTEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE ++RD YIVRNG LI+
Sbjct: 255 KTIGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFQRDKDYIVRNGDVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNRPMIRKDQGDLIYKTEEAKFAAVVDDIVERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK++ IPH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLKKREIPHSVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 7/161 (4%)
Query: 533 RLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLI 592
+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+ A+ +
Sbjct: 543 KAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNGGALEAI--M 600
Query: 593 SRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSIL 652
SR+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R+ IL
Sbjct: 601 SRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNEQRKIIYAERRQIL 658
Query: 653 TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
G E +Q+ Q + VV + G + W LD+L
Sbjct: 659 EG--EDHHEQVKQMIDDVVSAYVEGAT-AEGYAEDWDLDEL 696
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER+VL+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 758 MRQLERSVLLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFNGMLEGL 817
Query: 867 R 867
+
Sbjct: 818 K 818
>gi|333991611|ref|YP_004524225.1| preprotein translocase SecA1 1 subunit [Mycobacterium sp. JDM601]
gi|333487579|gb|AEF36971.1| preprotein translocase SecA1 1 subunit [Mycobacterium sp. JDM601]
Length = 928
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/491 (46%), Positives = 311/491 (63%), Gaps = 49/491 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F VQ++GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFHVQLMGGAALHYGNVAEMKTGEGKTLTCVLPAYLNAIAGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y D+TY N+E GFDYLRDN+A + +QLV R
Sbjct: 138 WMGRVHRFLGLEVGVILSAMTPDERRVAYNADVTYGTNNEFGFDYLRDNMAHSLDQLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +FAIVDEVDS+LIDE R PL+ISG A Y A++ L+ + +HY V+L+
Sbjct: 198 ---PHNFAIVDEVDSILIDEARTPLIISGPADGSSNWYTEFARIVPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ I+
Sbjct: 255 RTIGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRNGEVFIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLVGRRYNEGMHQAIEAKEQVEIKAENQTLATITLQNYFRLYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P R D + T K+ ++ + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMARTDQIDLIYKTEEAKFAAVVDDLVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ IPHNVLNA K REA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSKQLTKRRIPHNVLNA--KQHEREAHIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALN-VEVDDKTSSP--KVLSEIKLGSSSLALLAKAA 454
LGGN LA + L R+ L+ VE ++ + + LSEIK A AA
Sbjct: 493 LGGNVDFLADQ--------RLRRKGLDPVETPEEYEAAWDETLSEIK---------ALAA 535
Query: 455 LLAKYVGKAEG 465
+ AK V +A G
Sbjct: 536 VEAKEVIEAGG 546
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 169/375 (45%), Gaps = 65/375 (17%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L + + + E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 526 TLSEIKALAAVEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 585
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++ F+ + L++R+ +D+PIE + R + Q E+ F IRK+++++DE
Sbjct: 586 ELMRR--FNGAALESLLTRLNLPDDVPIEAKMVNRAIKSAQTQVEQQNFEIRKNVLKYDE 643
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL-- 693
V+ QRK +Y R+ IL G E+ ++Q + V+ + G + W L++L
Sbjct: 644 VMNQQRKVIYAERRRILDG--ENLAEQAHDMLVDVITAYVNGATSE-GYAEDWDLEQLWT 700
Query: 694 -LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
LK + + L A G+ + EEL E D N Y
Sbjct: 701 ALKTLYPVGIDYHELLHAADVGEADDLTREELLEALIADAENAY---------------- 744
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
+ + +G +A +R+ +L++ +E Y+ Y+KE
Sbjct: 745 -----------AAREAEVDG--KAGAGAMRELERGVLLSVLDRKWREHLYEMDYLKE--- 788
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE 872
+ +R+ R+PL EY+ +G F ML + +V
Sbjct: 789 -----------------------GIGLRAMAQRDPLVEYQREGYDMFTGMLEGLKEESVG 825
Query: 873 SL--VQYWSSPMESQ 885
L V ++P + Q
Sbjct: 826 FLFNVAVEAAPTQPQ 840
>gi|409390217|ref|ZP_11241976.1| protein translocase subunit SecA [Gordonia rubripertincta NBRC
101908]
gi|403199766|dbj|GAB85210.1| protein translocase subunit SecA [Gordonia rubripertincta NBRC
101908]
Length = 939
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 287/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSGEGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM RR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSSAARREAYAADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HAYAIVDEVDSILIDEARTPLIISGPAEGSSKWYTEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE ++RD YIVRNG LI+
Sbjct: 255 KTIGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFQRDKDYIVRNGDVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P +R D + T K+ ++ ++G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNRPMVRKDQGDLIYKTEEAKFAAVVDDIVERHQIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK++ IPH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLKKREIPHSVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 168/344 (48%), Gaps = 59/344 (17%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E V++ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+
Sbjct: 534 AAEEAEAVRKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNG 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ +SR+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 594 GALEAI--MSRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNEQRKI 649
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
+Y R+ IL G E +Q+ Q + VV + G + W LD+L +
Sbjct: 650 IYAERRQILEG--EDHHEQVKQMIDDVVSAYVEGAT-AEGYAEDWDLDELWTALRTLYPI 706
Query: 704 ILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
LD G+ G+T E ++++ ++ D K++ KR AI
Sbjct: 707 ELDP--KGVVGET---EYGERDDISAEELRETLVADA------------KAAYDKREKAI 749
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
D++ G R ++ER+VL+ LD W
Sbjct: 750 --DEIAGEGAMR---------------------------------QLERSVLLSVLDRKW 774
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
RDHL M+ L +++RS R+P+ EY+ +G F ML +
Sbjct: 775 RDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFNGMLEGLK 818
>gi|332798807|ref|YP_004460306.1| protein translocase subunit secA [Tepidanaerobacter acetatoxydans
Re1]
gi|438001838|ref|YP_007271581.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Tepidanaerobacter acetatoxydans Re1]
gi|332696542|gb|AEE90999.1| Protein translocase subunit secA [Tepidanaerobacter acetatoxydans
Re1]
gi|432178632|emb|CCP25605.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Tepidanaerobacter acetatoxydans Re1]
Length = 836
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 281/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQI+GG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 80 MRPFDVQIMGGIVLHQGRIAEMKTGEGKTLVATMPVYLNALTGQGVHIVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL VGLI + EER+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 EWMGKIYNFLGLEVGLIVHDLDFEERKKAYNADITYGTNNEFGFDYLRDNMVLYKEHMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG+A + Y A+ LV YTV+ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGQAEESTDIYYKFARFVPRLVPDEDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+SV TE+GI AE L +L+DE N + ALKA + D Y+V++G+ +I
Sbjct: 257 AHSVMPTEKGIKKAESFLGVENLYDEENMELLHHLQQALKAHALMKLDRDYVVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKVENESKTLATITFQNYFRMYKKLAGMTGTAA 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN P IR D P + T +GK+ +E++ R GRPVLVG
Sbjct: 377 TEEEEFRGIYGLDVVVIPTNKPMIRTDYPDAVYKTEKGKFNAVVEEIQECHRKGRPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA KY +EA+ +AQAG+K A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSELLSSMLKRKGIPHQVLNA--KYHEKEAQIIAQAGQKGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 7/199 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYISLEDDLMRLFGADNIK 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I + + Q E + F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 GI--MDKLGLEEDQPIEHPLITKSIESAQKKVEAHNFDIRKHVLEYDDVMNTQREVIYSQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKI 704
R+ +L +E+ I + + VV ++ HP W + L LK+ I+ I
Sbjct: 615 RRHVL--ESENLKDSIMEMIAQVVGRLMDIYASKEIHPEEWDISGLSEYLKDIFQISCDI 672
Query: 705 LDDLFAGISGDTLLKSIEE 723
+ IS + + + + E
Sbjct: 673 DESKLEDISREDICRILTE 691
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER +++KT+D W DH+ M++L + +R++G R+P+ EYK +G F M+
Sbjct: 709 MRELERYIMLKTVDQKWMDHIDAMDQLREGIGLRAYGQRDPVIEYKFEGYEMFQDMIKNI 768
Query: 867 RRLTVESL--VQYWSSPMESQE 886
+ T+ L V+ ++P E QE
Sbjct: 769 QEDTLRYLFRVRIKAAP-ERQE 789
>gi|343927666|ref|ZP_08767134.1| protein translocase subunit SecA [Gordonia alkanivorans NBRC 16433]
gi|343762307|dbj|GAA14060.1| protein translocase subunit SecA [Gordonia alkanivorans NBRC 16433]
Length = 937
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALSDEGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM RR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 138 WMGRVHRFLGLETAVILTGMSSAARREAYAADITYGTNNEFGFDYLRDNMAHSLADLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V++K
Sbjct: 198 G---HAYAIVDEVDSILIDEARTPLIISGPAEGSSKWYTEFARIAPLLEKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE ++RD YIVRNG LI+
Sbjct: 255 KTIGVHEAGVEFVEDRLGIDNLYEAANSPLVSYLNNAIKVKELFQRDKDYIVRNGDVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P +R D + T K+ ++ +G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNRPMVRKDQGDLIYKTEEAKFAAVVDDIVERHEIGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LK++ IPH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLKKREIPHSVLNA--KFHEQEAQIIAEAGRLGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 7/161 (4%)
Query: 533 RLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLI 592
+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ DE+ ++F+ A+ +
Sbjct: 543 KAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSVADELMRRFNGGALEAI--M 600
Query: 593 SRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSIL 652
SR+ + D+PIE + + + Q E+ F +RK+++++DEV+ QRK +Y R+ IL
Sbjct: 601 SRLPD--DVPIEAKMVTKAIRSAQTQVEQQNFEMRKNVLKYDEVMNEQRKIIYAERRQIL 658
Query: 653 TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
G E +Q+ Q + VV + G + W LD+L
Sbjct: 659 EG--EDHHEQVKQMIDDVVSAYVEGAT-AEGYAEDWDLDEL 696
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER+VL+ LD WRDHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 758 MRQLERSVLLSVLDRKWRDHLYEMDYLREGIHLRSMAQRDPVVEYQREGFDMFTGMLEGL 817
Query: 867 R 867
+
Sbjct: 818 K 818
>gi|159036565|ref|YP_001535818.1| preprotein translocase subunit SecA [Salinispora arenicola CNS-205]
gi|157915400|gb|ABV96827.1| preprotein translocase, SecA subunit [Salinispora arenicola
CNS-205]
Length = 971
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/442 (48%), Positives = 289/442 (65%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+IAEMKT V+TVNDYLA+RDA
Sbjct: 80 RPYDVQVMGGAALHFGNIAEMKTGEGKTLTSVMPVYLNALSGKGVHVITVNDYLAERDAA 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH FLGL+VG++ E R+ Y CDITY N+E GFDYLRDN+A + E LV R
Sbjct: 140 WMGRVHEFLGLTVGVVLPNRPATEHRAAYECDITYGTNNEFGFDYLRDNMAWSREDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FA+VDEVDS+LIDE R PL+ISG A Y A V L G Y V
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPAEHSARWYGEFAAVVARLQSGTDGEGDYEV 256
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ +V +TE G+A E L ++L++ N P ++ NA+KAKE ++RD YIV G+
Sbjct: 257 DYAKRTVAVTERGVAKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELFKRDKNYIVSEGE 316
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTG
Sbjct: 317 VLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKQENQTLATITLQNYFRLYEKLAGMTG 376
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF K++ + V+ +PT+ P IR D + T + K+ +++ + G+PV
Sbjct: 377 TAQTEAGEFNKVYNVGVVTIPTHRPMIREDRSDVIYKTEKAKFNAVVEDIVERHQAGQPV 436
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVENSE LS LL+++GIPH+VLNA K+ AREAE VAQAGRK A+T++TNMAGRG
Sbjct: 437 LVGTVSVENSEVLSQLLRRRGIPHSVLNA--KFHAREAEIVAQAGRKGAVTVATNMAGRG 494
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGNP+ LA + R L
Sbjct: 495 TDILLGGNPEFLAANELRQRGL 516
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 5/178 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E EV +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD
Sbjct: 532 VLPTWKHACDAEAEEVTSVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQD 591
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F AV + R ED+PIE + RQ+ Q E IRK+++++DE
Sbjct: 592 ELMKRFRSGAVEAV--MERFNIPEDVPIESKMVTRQIKTAQAQIESQNAEIRKNVLKYDE 649
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
V+ QR+ +Y R +L G E S Q+ + VV+ + G + W D+L
Sbjct: 650 VMNKQRQVIYAERLRVLNG--EDLSDQVRNMIDDVVEAYVRG-ATAEGYAEDWDFDQL 704
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++ER VL++ +D WR+HL M+ L +++R++ R+P+ EY+ +G F +M+
Sbjct: 761 VRQLERMVLLQVIDRKWREHLYEMDYLQEGISLRAYAQRDPVVEYQREGFDMFATMMDGI 820
Query: 867 RRLTV 871
+ TV
Sbjct: 821 KEETV 825
>gi|302530013|ref|ZP_07282355.1| preprotein translocase, SecA subunit [Streptomyces sp. AA4]
gi|302438908|gb|EFL10724.1| preprotein translocase, SecA subunit [Streptomyces sp. AA4]
Length = 972
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/485 (44%), Positives = 308/485 (63%), Gaps = 56/485 (11%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G +AEMKT VVT NDYLA+RDAE
Sbjct: 79 RPYDVQLMGGAALHLGQVAEMKTGEGKTLTCVLAAYLNAIPGDGVHVVTTNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGL VG+I P+ERR +Y D+TY N+E GFDYLRDN+ + ++ V R
Sbjct: 139 WMGRIHRFLGLEVGVIVAEQDPQERRKHYNADVTYGTNNEFGFDYLRDNMTWSLDECVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+LIDE R PL+ISG A + Y A++A L+ QG+
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARLAPLM-QGIDTTTMGTR 254
Query: 151 -------------HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALK 196
HY V+++ +V +TE+G+ E L +L++ N P ++ NALK
Sbjct: 255 ERVEKANLINSKYHYEVDVRKRTVAVTEKGVRFVEDQLGIENLYEAANTPLVGYLNNALK 314
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
KE Y +D YIVR+G+ +I++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A I
Sbjct: 315 VKELYHKDKDYIVRDGEVMIVDEFTGRILVGRRYNEGMHQAIEAKEGVEIKAENQTLATI 374
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T Q+ F+LY KLSGMTGTA+TE EF + +++ V+ +PTN P +R D + + K+
Sbjct: 375 TLQNYFRLYKKLSGMTGTAETEAAEFHQTYKLGVVPIPTNRPMVRADRADLIYKNEQAKF 434
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
E +++ G+PVLVG+TSVE SE+LS LL + G+PH VLNA KY +EA VA+
Sbjct: 435 EAVAEDIAERHEKGQPVLVGTTSVEKSEHLSKLLLKLGVPHEVLNA--KYHNKEALIVAR 492
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKV 436
AGRK A+T++TNMAGRGTDI+LGGNP ++A +++ +R L + + + + + PKV
Sbjct: 493 AGRKGAVTVATNMAGRGTDIVLGGNPDIIADEVLRERGL-----DPVENSEEYEAAWPKV 547
Query: 437 LSEIK 441
L EIK
Sbjct: 548 LEEIK 552
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 17/188 (9%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL++ + E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 547 VLEEIKEEARAEADEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 606
Query: 576 EMFQKFSFDTSWAVDLISRITND----EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
++ ++F+ AV L+ RI +D+PIE + + + Q E+ RK+++
Sbjct: 607 DLMRRFN-----AV-LVERIMTTMRLPDDVPIEHKMVSKAIKSAQTQVEQLNMETRKNVL 660
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNV-----DPLKHPR 686
++DEV+ QRK +Y R +L G E +QI + VV + G + H +
Sbjct: 661 KYDEVMNEQRKVIYAERHRVLEG--EDLREQIEHMIVDVVKAYVSGATSQGYAEDWDHEQ 718
Query: 687 YWSLDKLL 694
W+ K L
Sbjct: 719 LWTALKTL 726
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVY-----MKEVERAVLVKTLD 820
DDL ++G A + L + L D +A+Y +E+ D++ M+ +ER V++ LD
Sbjct: 734 DDLIEDGDLDAES--LSQALVDDALAAYAK--REAEIDELVGEEGSMRRLERQVMLTVLD 789
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
WR+HL M+ L + +R+ R+PL EY+ +G F +ML + + V
Sbjct: 790 RKWREHLYEMDYLKEGIGMRALAQRDPLIEYQREGFDMFRAMLDSLKEEAV 840
>gi|206889376|ref|YP_002248850.1| preprotein translocase subunit SecA [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|226732259|sp|B5YKT5.1|SECA_THEYD RecName: Full=Protein translocase subunit SecA
gi|206741314|gb|ACI20371.1| preprotein translocase, SecA subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 880
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 297/452 (65%), Gaps = 47/452 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MRHFDVQLVGGLVLHEGKIAEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLARRDV 139
Query: 38 EWMERVHRFLGLSVGLIQRG------------------MIPEERRSNYRCDITYTNNSEL 79
+WM ++ FLGLSVG+IQ + P ++ Y DITY N+E
Sbjct: 140 QWMGAIYNFLGLSVGVIQPDASFLYDPNYRLPDRRFDRLRPCSKKEAYLADITYGTNNEF 199
Query: 80 GFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA 139
GFDYLRDN+ + ++L R ++AIVDEVDS+LIDE R PL+ISG + + Y
Sbjct: 200 GFDYLRDNMRYSIDELCQR---ELNYAIVDEVDSILIDEARTPLIISGPSEESTDIYYAV 256
Query: 140 AKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAK 198
++ + L + ++ K +V LTE+G AE L ++L++ N + A++A
Sbjct: 257 NRIIKYLKPENDFKLDEKLKTVVLTEQGSQKAEKLLGIDNLYNPSNIQVVHHINQAIRAH 316
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
F++++V Y+V++GK +I++E TGR+ E RRWS+G+HQA+EAKEGLKI+A++ +A IT+
Sbjct: 317 YFFKKEVDYVVKDGKIVIVDEFTGRLLEGRRWSDGLHQAIEAKEGLKIEAENQTLATITF 376
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KL+GMTGTA TE EF +++ + V+ +PT+ P IR D P + T + K+E
Sbjct: 377 QNYFRMYKKLAGMTGTADTEASEFAEIYNLEVVVIPTHKPMIREDYPDAVYKTEKAKYEA 436
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+E+E +++GRPVLVG+TS+E SE +S +LK++G+PHNVLNA KY +EAE VAQAG
Sbjct: 437 VVKEIEECYKVGRPVLVGTTSIEKSELISKMLKKKGVPHNVLNA--KYHDKEAEIVAQAG 494
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKKII 410
R A+TI+TNMAGRGTDI+LGGNP+ LA++++
Sbjct: 495 RIGAVTIATNMAGRGTDILLGGNPEFLAREML 526
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y L+ + C E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +S
Sbjct: 536 YKKALEKAKEICKEEHDKVVSLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLS 595
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+DE+ + F + + L+ + ++D PIE + + + Q E + F IRK L++
Sbjct: 596 LEDELLRLFGGERLQS--LMHFLKIEDDTPIENKMVSKAIENAQKRVEAHNFDIRKHLLK 653
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+D+V+ QR +Y R+ +L ++S ++F+ ++ +DE++
Sbjct: 654 YDDVMNSQRNEIYSFRKEVLE--SDSLKDKVFELLEIEIDEMV 694
>gi|403382581|ref|ZP_10924638.1| protein SecA [Paenibacillus sp. JC66]
Length = 835
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/422 (49%), Positives = 284/422 (67%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ+IGG VLH+G IAEMKT +VTVNDYLA E
Sbjct: 81 RHFDVQLIGGMVLHEGRIAEMKTGEGKTLVATLPLYLNALTGKGAHLVTVNDYLATVGYE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++++FLGL+VGL M +++R Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYKFLGLTVGLNLNSMSHDQKREAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +FAI+DEVDS+LIDE R PL+ISG+A+K Y A ++ L + YT+++K
Sbjct: 201 ---PLNFAIIDEVDSILIDEARTPLIISGQAAKSTDLYYAADRLVSTLKEEEDYTIDIKM 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTEEG+A AE A +L+D +N + ALKA+ +RD Y+V++G+ +I+
Sbjct: 258 RSVSLTEEGVAKAERAFGIENLFDHQNVTLNHHITQALKARAIMKRDTDYVVQDGEVVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE LK+Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMTGRRYSEGLHQAIEAKEKLKVQNESMTLATITFQNYFRMYQKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + VI VPTN P IR DLP + + K+ +++ + +PVLVG+
Sbjct: 378 EEEEFKKIYGLEVIIVPTNRPMIRKDLPDVVYKSINSKFRAVVEQIHEKHQNNQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LSD+LK++G+ H VLNA K+ A EAE VA+AG A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSERLSDMLKKKGVKHKVLNA--KHHAEEAEIVARAGEPGAVTIATNMAGRGTDIL 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F +
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDELMRRFGAENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ +ED I+ I + + Q E F +RK ++++D+V+ QR +Y
Sbjct: 557 G--MMDKLGFEEDQEIQSGLITKAIESAQKRVEGNNFDMRKVVLQYDDVMNQQRNIIYKQ 614
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVD 672
R+ +L N E I+ ++ +VD
Sbjct: 615 RREVLEADNIREITLNMIYPLIERIVD 641
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + +M+E E+ V+++ +D W DH+ M++L +++R++G +PL EY+ +G
Sbjct: 700 REEEIGEQHMREFEKVVVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFE 759
Query: 858 FFISMLSA 865
F M+ +
Sbjct: 760 MFQRMIES 767
>gi|261409629|ref|YP_003245870.1| preprotein translocase subunit SecA [Paenibacillus sp. Y412MC10]
gi|261286092|gb|ACX68063.1| preprotein translocase, SecA subunit [Paenibacillus sp. Y412MC10]
Length = 837
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 287/422 (68%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEMKT VVTVNDYLAQRD++
Sbjct: 81 RHYDVQLIGGMALHEGRIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSQ 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VG+ GM +++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMAQIYNFLGMTVGVNLSGMEHPDKQQAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YTV++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKRLTAEEDYTVDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE+G+ALAE + +L+D N ++ ALKA RRDV Y+V + + +I+
Sbjct: 258 KSVALTEKGVALAERSFGIENLYDHNHVTLNHHIVQALKANVIMRRDVDYVVTDDEVVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKEG+++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKEGIEVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN RVD+P + + GK++ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNKPNQRVDMPDVVYKSEEGKFKAVVAEIVERHKKNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG+ ++TI+TNMAGRGTDI+
Sbjct: 438 VSIENSERLSEMLKRKGVQHKVLNA--KYHAEEAEIISRAGQPGSVTIATNMAGRGTDIL 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 70/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ +GGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVQDIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGTDN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLNMMERLGFEEDQPIESKMITRAVESAQKRVEGNNFDMRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ IL ++ Q + + ++ V+D ++ + D + P W L ++ + K+LD
Sbjct: 615 RREIL--ESQDIKQIVVEMIKPVIDRVVQAHCSDDI--PENWELQEVAD---YVNSKLLD 667
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
+ A D K EEL E LF + +K +R AI
Sbjct: 668 E-GAVTREDLWGKEAEELTEY------------------LFDRVMKKYE--EREQAI--- 703
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
G+ ++ + V+ V RAV D W DH
Sbjct: 704 -------------------GEEMVREFEKVI------------VLRAV-----DSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++G +PL EY+ +G F +M++
Sbjct: 728 IDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMIAT 766
>gi|403729603|ref|ZP_10948627.1| protein translocase subunit SecA [Gordonia rhizosphera NBRC 16068]
gi|403203017|dbj|GAB92958.1| protein translocase subunit SecA [Gordonia rhizosphera NBRC 16068]
Length = 951
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 285/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RD+E
Sbjct: 78 KHFHVQIMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALAGDGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM E+RR Y DITY N+E GFDYLRDN+A N LV R
Sbjct: 138 WMGRVHRFLGLDTAVILTGMNSEQRREAYAADITYGTNNEFGFDYLRDNMAHNLPDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++ LL + +HY V++K
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPAEGSSKWYVEFARIVPLLERDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+K KE + RD YIVRNG+ LI+
Sbjct: 255 KTIGVHEAGVTFVEDQLGIDNLYEAANSPLVSYLNNAIKVKELFHRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKERVEIKPENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K++ ++ G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNRPMIRKDQTDLIYKTEEAKFDAVVDDITERHEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L ++ +PHNVLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLAKRDVPHNVLNA--KFHEQEAQIIAEAGRAGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 493 LGGNPDIIA 501
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ + V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 ATEQAEAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNG 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ ++R+ +D+PIE + + + Q E+ F IRK+++++DEV+ QRK
Sbjct: 594 AALEAI--MNRVNLPDDVPIEAKMVTKAIRSAQTQVEEQNFEIRKNVLKYDEVMNEQRKV 651
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R+ IL G E +Q+ Q ++DE++ VD Y W LD+L
Sbjct: 652 IYGERRRILEG--EDHREQV----QTMIDEVVGAYVDGATAEGYTEDWDLDQL 698
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER++L+ LD W+DHL M+ L +++RS R+P+ EY+ +G F ML
Sbjct: 760 MRQLERSILLTVLDRKWQDHLYEMDYLREGIHLRSMAQRDPVVEYQREGYDMFTGMLDGL 819
Query: 867 R 867
+
Sbjct: 820 K 820
>gi|398813973|ref|ZP_10572659.1| preprotein translocase, SecA subunit [Brevibacillus sp. BC25]
gi|398037384|gb|EJL30576.1| preprotein translocase, SecA subunit [Brevibacillus sp. BC25]
Length = 839
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 285/427 (66%), Gaps = 37/427 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL +G I+EMKT VVTVN+YLA+RD+
Sbjct: 80 MRHFDVQMIGGMVLQEGRISEMKTGEGKTLVATLATYLNALMGKGVHVVTVNEYLAERDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M R++ FLGL+VGL + G+ PEE+R Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 TIMGRLYNFLGLTVGLNKNGLSPEEKREAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P FAI+DEVDS+LIDE R PL+ISG A+K Y + + + L + +T++ K
Sbjct: 200 R---PLFFAIIDEVDSILIDEARTPLIISGSANKSTELYYICSHFVKRLEEEKDFTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-----ALKAKEFYRRDVQYIVRNG 212
V L++EG+ E A ++L+D A +N ALKA+ ++RDV Y+V+ G
Sbjct: 257 LKIVNLSDEGVTKVEQAFNIDNLYD----TAHITLNHHITAALKAQVLFKRDVDYVVQEG 312
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ +I++E TGR+ RR+S+G+HQA+EAKEGL++Q++S+ +A IT Q+ F++Y KL+GMT
Sbjct: 313 EVVIVDEFTGRLMVGRRYSDGLHQAIEAKEGLRVQSESMTLATITLQNYFRMYQKLAGMT 372
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTAKTEE+EF K++ + V+ +PTN P +RVD P F T K+ ++ + G+P
Sbjct: 373 GTAKTEEEEFKKIYGLDVVVIPTNKPVLRVDSPDLVFKTEAAKYRAVVNDIVERHKKGQP 432
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
+LVG+ S+ENSE LS +LKQ+G+PHNVLNA K REAE VA+AG A+TI+TNMAGR
Sbjct: 433 ILVGTISIENSERLSQMLKQKGVPHNVLNA--KQHEREAEIVARAGVYGAVTIATNMAGR 490
Query: 393 GTDIILG 399
GTDI LG
Sbjct: 491 GTDIQLG 497
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S+QDE+ ++F D
Sbjct: 497 GEGVADVGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSMQDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +EDMPIE + R + Q E F RK ++++D+V+ QR VY
Sbjct: 555 IMNMMDRLGMEEDMPIESRLVTRAVESAQKRVEGSNFDARKGVLQYDDVMNQQRLVVYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ IL E+ S + AV++ + + + P W L +
Sbjct: 615 RKDILE--QENLSDVALNMIYAVMERAVSLHCPKEEVPEDWDLQAM 658
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E E+ V+++ +D W DH+ M++L +++R++ +PL EY+ +G + ML+A
Sbjct: 708 IREFEKVVILRAVDSKWMDHIDAMDQLRQGIHLRAYAQNDPLREYQFEGYEMYQGMLAAV 767
Query: 867 RRLTVESLVQYWSSPMESQEL 887
+ E + Y SQ L
Sbjct: 768 Q----EEVAMYIMKAEVSQNL 784
>gi|227486945|ref|ZP_03917261.1| preprotein translocase subunit SecA [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227093019|gb|EEI28331.1| preprotein translocase subunit SecA [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 863
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GG LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYHVQIMGGLALHYGNVAEMKTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL+ +I M P ER+ Y+ DITY N+ELGFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHRFLGLTTDVILSNMRPPERKKAYQADITYGTNNELGFDYLRDNMARSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y A++ L + +HY V+ +
Sbjct: 200 G---HHYAIVDEVDSILIDEARTPLIISGPVDATSEWYTAFARIVPKLKRDIHYEVDDRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEGIA E L ++L+ E+ ++ NA+KAKE + RD YIVR+G+ +I+
Sbjct: 257 RTIGVKEEGIAAVEDELGVDNLYAPEHSQLVGYLNNAIKAKELFTRDKDYIVRDGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRVLDGRRYNEGMHQAIEAKEGVEIKKENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN PN R DL + T K+ ++ + G+PVLVG+
Sbjct: 377 EAAELHQIYKLNVVPIPTNRPNQREDLVDLVYKTQEAKFAAVADDIAECVQRGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+ +GI HNVLNA KY +EAE VAQAG IT++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQSRGIRHNVLNA--KYHEKEAEIVAQAGLPGNITVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 495 LGGNPDILA 503
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT H+SRRIDNQLRGR+ RQGDPG TRF +SL+D++ +F T
Sbjct: 542 KVRAAGGLYVLGTERHDSRRIDNQLRGRSARQGDPGKTRFYLSLRDDLMTRFVGPT--LE 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+L++R+ +D+PIE + R + Q E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NLLNRLNVPDDVPIEDKMVTRSIKNAQTQVESQNFEMRKNVLKYDEVMNEQRKVIYRERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
IL G + +QI ++M + + G + W LD+L
Sbjct: 660 DILEGRD--LEEQIREFMNETISAYVHGATRE-GYLEDWDLDEL 700
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-----------YMKEVERAVL 815
DL + +Y A L K L LIA ++YD++ M+ +ER V+
Sbjct: 716 DLVEGSQYGAPGELSAKDLEKALIAD-----ASAQYDNLEEAVSIIGGEEQMRSIERMVI 770
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 771 LGVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFRAMKDAIKEETVRQL 829
>gi|206602061|gb|EDZ38543.1| Preprotein translocase SecA subunit [Leptospirillum sp. Group II
'5-way CG']
Length = 908
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/431 (48%), Positives = 282/431 (65%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGVVLHEGFIAEMKTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R++RFL L+ G+IQ M + R+ Y DITY N+E GFDYLRDN+ +Q V
Sbjct: 141 DWMGRLYRFLRLTTGIIQHDMPDDLRKQAYAADITYGTNNEFGFDYLRDNMKYEEDQFVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + Y ++ +V+ H+ ++ K
Sbjct: 201 RG---LHYAIVDEVDSILIDESRTPLIISGPSEESTDMYYQVDRIIPGMVRDTHFRIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT+EG E L +L+D N W V+ ALKA YRRDV+Y+V+NG+ +I
Sbjct: 258 LKTVTLTDEGNNYVEDRLGIGNLYDVANINWFHHVLQALKAHHLYRRDVEYVVKNGEVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRW EG+HQAVEAKE +KI+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRWGEGLHQAVEAKEKVKIEQENQTLATITFQNYFRMYEKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + VI VPT+ N R DLP Q + T K +++ G+PVLVG
Sbjct: 378 TEAQEFHKIYNLDVIVVPTHRKNQREDLPDQIYRTYHEKARAIVEDIRERNGRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE+LS LL ++GIPH VLNA K+ EAE VAQAGR ++TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSEHLSALLAKEGIPHKVLNA--KFHELEAEIVAQAGRFSSVTIATNMAGRGTDI 495
Query: 397 ILGGNPKMLAK 407
+LGGN + L K
Sbjct: 496 VLGGNAEFLLK 506
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 4/189 (2%)
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
K+ E E +V R GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++
Sbjct: 529 KELEKTLEKEREDVVRTGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDL 588
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
+ F D L+ R+ +E +PIE + + + Q E ++F +RK L+E+D+V+
Sbjct: 589 LRIFGADRIKG--LMDRLGVEEGVPIEHGFVTKAIENAQKKVEAHHFDVRKQLLEYDDVM 646
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
QR Y+LR+ +L G E+ + ++ Q V+ + ++P W L L
Sbjct: 647 NQQRLIFYELRRKVLRG--ENLKDLLEEWGQDVLLSVTREFAPEDQYPETWDLTALATGI 704
Query: 698 IAIAGKILD 706
+ G +D
Sbjct: 705 MEKTGLSVD 713
>gi|402814027|ref|ZP_10863621.1| protein translocase subunit SecA [Paenibacillus alvei DSM 29]
gi|402507874|gb|EJW18395.1| protein translocase subunit SecA [Paenibacillus alvei DSM 29]
Length = 836
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/423 (49%), Positives = 281/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH+G IAEMKT VVTVNDYLA RD+
Sbjct: 80 MRHYDVQMLGGMVLHEGKIAEMKTGEGKTLVGTLPVYLNALEGKGVHVVTVNDYLASRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +V+ FLG++VGL GM ++ Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 EIMAQVYNFLGMTVGLNLSGMDHNMKQEAYACDITYGTNNEYGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAI+DEVDS+LIDE R PL+ISG+A+K Y VA + L YT+++K
Sbjct: 200 R---PLNFAIIDEVDSILIDEARTPLIISGQAAKSTELYFVADRFVSRLKGEEDYTIDVK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V LTE G+A AE AL +L+D +N + ALKA R DV Y+V +G+ +I
Sbjct: 257 TRQVALTEAGVAKAEKALGVENLFDVKNVTLNHHIQQALKAHAIMRLDVDYVVNDGEIVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL++Q +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRMMAGRRYSDGLHQAIEAKEGLEVQNESMTLATITFQNYFRMYRKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + VI+VPTN PN R D+P + + K+ +E+ + G+PVLVG
Sbjct: 377 TEEEEFKSIYGLEVIQVPTNKPNQRKDMPDVVYKSENAKYNAVVEEIVKRHKNGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LSD+L+++GI H VLNA KY A EA ++ AG +TI+TNMAGRGTDI
Sbjct: 437 TVSIENSERLSDMLRRKGIKHQVLNA--KYHAEEANIISSAGEPNQVTIATNMAGRGTDI 494
Query: 397 ILG 399
ILG
Sbjct: 495 ILG 497
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F D
Sbjct: 497 GEGVSASGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLEDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR +Y
Sbjct: 555 VLGMMERLGFEEDQPIESKLITRAVESAQKRVEGNNFDLRKVVLQYDDVMNQQRGIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L +E+ Q + ++ ++ ++ + + P W L++++
Sbjct: 615 RYEVLD--SENIRQIVLDMIKPCIERVVDAHCNEDDIPENWDLEEIV 659
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E R ++E E+ V+++ +D W DH+ M+ L +++R++G +PL EY+ +G
Sbjct: 700 REERIGPELVREFEKVVVLRAVDSKWMDHIDAMDHLRQGIHLRAYGGTDPLREYQFEGYE 759
Query: 858 FFISMLSA 865
F SM+++
Sbjct: 760 MFNSMVAS 767
>gi|125973900|ref|YP_001037810.1| preprotein translocase subunit SecA [Clostridium thermocellum ATCC
27405]
gi|256005021|ref|ZP_05429992.1| preprotein translocase, SecA subunit [Clostridium thermocellum DSM
2360]
gi|281418063|ref|ZP_06249083.1| preprotein translocase, SecA subunit [Clostridium thermocellum
JW20]
gi|385778217|ref|YP_005687382.1| preprotein translocase subunit SecA [Clostridium thermocellum DSM
1313]
gi|419721264|ref|ZP_14248430.1| Protein translocase subunit secA [Clostridium thermocellum AD2]
gi|419727331|ref|ZP_14254301.1| Protein translocase subunit secA [Clostridium thermocellum YS]
gi|166918856|sp|A3DF88.1|SECA_CLOTH RecName: Full=Protein translocase subunit SecA
gi|125714125|gb|ABN52617.1| preprotein translocase, SecA subunit [Clostridium thermocellum ATCC
27405]
gi|255990989|gb|EEU01100.1| preprotein translocase, SecA subunit [Clostridium thermocellum DSM
2360]
gi|281409465|gb|EFB39723.1| preprotein translocase, SecA subunit [Clostridium thermocellum
JW20]
gi|316939897|gb|ADU73931.1| preprotein translocase, SecA subunit [Clostridium thermocellum DSM
1313]
gi|380769286|gb|EIC03236.1| Protein translocase subunit secA [Clostridium thermocellum YS]
gi|380782705|gb|EIC12337.1| Protein translocase subunit secA [Clostridium thermocellum AD2]
Length = 910
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/452 (47%), Positives = 285/452 (63%), Gaps = 44/452 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT VVTVNDYLA RD+
Sbjct: 80 MRHFRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLATRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLSVGLI G+ EER+ Y CDITY N+E GFDYLRDN+ E +V
Sbjct: 140 EWMGKLYNFLGLSVGLIVHGLTNEERKKAYSCDITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGL------ 150
R HFAIVDEVDS+LIDE R PL+ISG K Y A A V L V+
Sbjct: 200 R---DLHFAIVDEVDSILIDEARTPLIISGVGDKSTDLYTRADAFVRRLKVKVFTELDDK 256
Query: 151 --------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
Y V+ K N+ LT G+ AE +L D +N + + AL+A
Sbjct: 257 EQTDDIEADYIVDEKANTATLTASGVKKAEEFFGIQNLSDPDNMTISHHINQALRAHGLM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+RD Y+V++ + +I++E TGR+ RR+S G+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 317 KRDRDYVVKDDQVIIVDEFTGRLMYGRRYSNGLHQAIEAKEGVKVERESKTLASITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F++Y KLSGMTGTA+TEE+EF ++ + V+ +PTN+P IRVD P + RGK+
Sbjct: 377 FRMYRKLSGMTGTAQTEEQEFRSIYNLDVVVIPTNMPVIRVDHPDSVYKNERGKFNAVIN 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
+V + G+PVL+G+ S+E SE LS +LK+ GIPH VLNA KY +EAE +AQAG+
Sbjct: 437 QVIECHKKGQPVLIGTISIEKSELLSSMLKRHGIPHQVLNA--KYHEKEAEIIAQAGKLG 494
Query: 382 AITISTNMAGRGTDIILGGNPKMLAKKIIEDR 413
A+TI+TNMAGRGTDI+LGGNP+ +AK+ + R
Sbjct: 495 AVTIATNMAGRGTDILLGGNPEFMAKQEMRKR 526
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 96/156 (61%), Gaps = 8/156 (5%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGRAGRQGDPG +RF +SL+D++ + F D ++
Sbjct: 576 GGLFIIGTERHESRRIDNQLRGRAGRQGDPGESRFYISLEDDLMRLFGSDRLMG--MVEA 633
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +ED PIE + + Q E F IRKS++E+D+V+ QR+ +Y R+ +L G
Sbjct: 634 LGLEEDQPIEHKMLSNAIENAQKRVESRNFAIRKSVLEYDDVMNKQREVIYAQRRKVLNG 693
Query: 655 ANESCSQQIFQYMQAVVDEII--FGNVDPLKHPRYW 688
E+ + I + M+ + D I+ F + +P HP +W
Sbjct: 694 --ENLKENIVKMMENIADYIVNLFCSENP--HPDFW 725
>gi|227541894|ref|ZP_03971943.1| preprotein translocase subunit SecA [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182337|gb|EEI63309.1| preprotein translocase subunit SecA [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 863
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GG LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYHVQIMGGLALHYGNVAEMKTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL+ +I M P ER+ Y+ DITY N+ELGFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHRFLGLTTDVILSNMRPPERKKAYQADITYGTNNELGFDYLRDNMARSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y A++ L + +HY V+ +
Sbjct: 200 G---HHYAIVDEVDSILIDEARTPLIISGPVDATSEWYTAFARIVPKLKRDIHYEVDDRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEGIA E L ++L+ E+ ++ NA+KAKE + RD YIVR+G+ +I+
Sbjct: 257 RTIGVKEEGIAAVEDELGVDNLYAPEHSQLVGYLNNAIKAKELFTRDKDYIVRDGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRVLDGRRYNEGMHQAIEAKEGVEIKKENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN PN R DL + T K+ ++ + G+PVLVG+
Sbjct: 377 EAAELHQIYKLNVVPIPTNRPNQREDLVDLVYKTQEAKFAAVADDIAECVQRGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+ +GI HNVLNA KY +EAE VAQAG IT++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQSRGIRHNVLNA--KYHEKEAEIVAQAGLPGNITVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 495 LGGNPDILA 503
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT H+SRRIDNQLRGR+ RQGDPG TRF +SL+D++ +F T
Sbjct: 542 KVRAAGGLYVLGTERHDSRRIDNQLRGRSARQGDPGKTRFYLSLRDDLMTRFVGPT--LE 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+L++R+ +D+PIE + R + Q E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NLLNRLNVPDDVPIEDKMVTRSIKNAQTQVESQNFEMRKNVLKYDEVMNEQRKVIYRERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
IL G + +QI ++M + + G + W LD+L
Sbjct: 660 DILEGRD--LEEQIREFMNETISAYVHGATRE-GYLEDWDLDEL 700
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-----------YMKEVERAVL 815
DL + Y A L K L LIA ++YD++ M+ +ER V+
Sbjct: 716 DLVEGSEYGAPGELSAKDLEKALIAD-----ASAQYDNLEEAVSIIGGEEQMRSIERMVI 770
Query: 816 VKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 771 LGVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFRAMKDAIKEETVRQL 829
>gi|329928763|ref|ZP_08282612.1| preprotein translocase, SecA subunit [Paenibacillus sp. HGF5]
gi|328937544|gb|EGG33962.1| preprotein translocase, SecA subunit [Paenibacillus sp. HGF5]
Length = 837
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 287/422 (68%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEMKT VVTVNDYLAQRD++
Sbjct: 81 RHYDVQLIGGMALHEGRIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSQ 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VG+ GM +++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMAQIYNFLGMTVGVNLSGMEHPDKQQAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YTV++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKRLTAEEDYTVDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE+G+ALAE + +L+D N ++ ALKA RRDV Y+V + + +I+
Sbjct: 258 KSVALTEKGVALAERSFGIENLYDHNHVTLNHHIVQALKANVIMRRDVDYVVTDDEVVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKEG+++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKEGIEVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN RVD+P + + GK++ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNKPNQRVDMPDVVYKSEDGKFKAVVAEIVERHKKNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG+ ++TI+TNMAGRGTDI+
Sbjct: 438 VSIENSERLSEMLKRKGVQHKVLNA--KYHAEEAEIISRAGQPGSVTIATNMAGRGTDIL 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 70/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ +GGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVQDIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGTDN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLNMMERLGFEEDQPIESKMITRAVESAQKRVEGNNFDMRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ IL ++ Q + + ++ V+D ++ + D + P W L ++ + K+LD
Sbjct: 615 RREIL--ESQDIKQIVVEMIKPVIDRVVQAHCSDDI--PENWELQEVAD---YVNSKLLD 667
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
+ A D K EEL E LF + +K +R AI
Sbjct: 668 E-GAVTREDLWGKEAEELTEY------------------LFDRVMKKYE--EREQAI--- 703
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
G+ ++ + V+ V RAV D W DH
Sbjct: 704 -------------------GEEMVREFEKVI------------VLRAV-----DSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++G +PL EY+ +G F +M++
Sbjct: 728 IDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMIAT 766
>gi|28948916|pdb|1NKT|A Chain A, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis Complex With Adpbs
gi|28948917|pdb|1NKT|B Chain B, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis Complex With Adpbs
gi|28948955|pdb|1NL3|A Chain A, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis In Apo Form
gi|28948956|pdb|1NL3|B Chain B, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis In Apo Form
Length = 922
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 111 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 170
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 171 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 230
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 231 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 287
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 288 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 347
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 348 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 407
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 408 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 467
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 468 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 525
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 526 LGGNVDFLTDQRLRERGL 543
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 567 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 624
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 625 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 684
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 685 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 741
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 742 ----------GITADSLT---------------------------------RKDHEFER- 757
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 758 -----DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 805
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 806 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 857
>gi|317059271|ref|ZP_07923756.1| protein translocase subunit secA [Fusobacterium sp. 3_1_5R]
gi|313684947|gb|EFS21782.1| protein translocase subunit secA [Fusobacterium sp. 3_1_5R]
Length = 889
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/453 (47%), Positives = 294/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G I EMKT V+TVNDYLA RD
Sbjct: 81 LRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATAPVYLNALSGRGVHVITVNDYLATRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+ FLGL+ G+I GM ++RR+ Y+CDITY NSE GFDYLRDN+ A+ + V
Sbjct: 141 EMMGRVYSFLGLTSGVIVNGMYGKDRRAAYQCDITYGTNSEFGFDYLRDNMVASVGEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++ IVDEVDS+LIDE R PL+ISG +S + Y VA +V LL +
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGASSDAIKWYQVAYQVVSLLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K ++ LTE+G++ E L+ ++L+ EN ++ A
Sbjct: 258 IKEKKEMNIPDEKWGDYEVDEKAKNIVLTEKGVSKVEKLLKLDNLYSPENVEITHYINQA 317
Query: 195 LKAKEFYRRDVQYIVRN-GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR+ G+ +II+E TGR E RR+S+G+HQA+EAKE ++I ++ +
Sbjct: 318 LKAKELFKRDRDYLVRDTGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEAVRIAGENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTN P IR D + T
Sbjct: 378 ATITLQNYFRMYQKLSGMTGTAETEATEFVHTYGLEVVVIPTNEPVIRKDHSDLVYKTKE 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K E ++E +++ G+PVLVG+ S+++SE LSDL+K++GIPHNVLNA KY A+EAE
Sbjct: 438 EKLEAIIDKIEELYKKGQPVLVGTVSIQSSEELSDLIKKKGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGRK ++TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 VAQAGRKGSVTIATNMAGRGTDIMLGGNPEFLA 528
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 73/365 (20%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A++ G A Y +L C E EV LGGL+++GT HESRRIDNQLRGR+GR
Sbjct: 528 AIHEAGSREAENYSEILSKYVKQCEEERKEVLALGGLYILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG ++F +SL+D++ + F D AV + ++ PI I + + Q E
Sbjct: 588 QGDPGESQFFLSLEDDLMRLFGSDRVKAV--MEKLGLPHGEPITHKMINKAIENAQTKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ Q R +I NE A+V E + N+
Sbjct: 646 SRNFGIRKNLLEFDDVMNKQ-------RTAIYASRNE-----------ALVKEDLKSNIL 687
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ H ++ K F + G++ +D DI
Sbjct: 688 SMLHDIIYT-----KTFQHLVGEVKEDW----------------------DIQ------- 713
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNL--LRKYLGDILIASYLNVVQ 798
L ++LA D + ++ + + N+ L D L A Y +
Sbjct: 714 ---------------GLAKYLAERFDYIIEDEKEYMSMNVEDYAALLYDRLSAVYEE--K 756
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
E+R M+++E+ +L + +D WR+HL ++ L + +R++G +NP+ EYK+
Sbjct: 757 ENRMGSEIMRKIEKYILFEVVDARWREHLKALDGLREGIYLRAYGQKNPVTEYKLVSSEI 816
Query: 859 FISML 863
+ ML
Sbjct: 817 YEKML 821
>gi|433632339|ref|YP_007265967.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140070010]
gi|432163932|emb|CCK61361.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140070010]
Length = 950
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 496 LGGNVDFLTDQRLRERGL 513
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 537 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 594
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 595 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 654
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 655 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 711
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 712 ----------GITADSLT---------------------------------RKDHEFER- 727
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 728 -----DDLTRE-------ELLDALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 775
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 776 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
>gi|15842829|ref|NP_337866.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CDC1551]
gi|31794420|ref|NP_856913.1| preprotein translocase subunit SecA [Mycobacterium bovis AF2122/97]
gi|57117080|ref|YP_177950.1| Probable preprotein translocase SecA1 1 subunit [Mycobacterium
tuberculosis H37Rv]
gi|121639129|ref|YP_979353.1| preprotein translocase subunit SecA [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148663103|ref|YP_001284626.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
H37Ra]
gi|148824442|ref|YP_001289196.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
F11]
gi|167967992|ref|ZP_02550269.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
H37Ra]
gi|224991622|ref|YP_002646311.1| preprotein translocase subunit SecA [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253800282|ref|YP_003033283.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis KZN
1435]
gi|289571467|ref|ZP_06451694.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
T17]
gi|289575960|ref|ZP_06456187.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
K85]
gi|289751933|ref|ZP_06511311.1| preprotein translocase secA1 [Mycobacterium tuberculosis T92]
gi|289759380|ref|ZP_06518758.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
T85]
gi|294993820|ref|ZP_06799511.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
210]
gi|297635893|ref|ZP_06953673.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis KZN
4207]
gi|297732890|ref|ZP_06962008.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis KZN
R506]
gi|298526716|ref|ZP_07014125.1| preprotein translocase secA1 subunit [Mycobacterium tuberculosis
94_M4241A]
gi|306795001|ref|ZP_07433303.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu005]
gi|313660222|ref|ZP_07817102.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis KZN
V2475]
gi|339633250|ref|YP_004724892.1| preprotein translocase subunit SecA [Mycobacterium africanum
GM041182]
gi|340628219|ref|YP_004746671.1| putative preprotein translocase SECA1 1 subunit [Mycobacterium
canettii CIPT 140010059]
gi|375297512|ref|YP_005101779.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
KZN 4207]
gi|378772988|ref|YP_005172721.1| protein translocase subunit [Mycobacterium bovis BCG str. Mexico]
gi|386000029|ref|YP_005918328.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CTRI-2]
gi|386006079|ref|YP_005924358.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
RGTB423]
gi|392387864|ref|YP_005309493.1| secA1 [Mycobacterium tuberculosis UT205]
gi|392433722|ref|YP_006474766.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis KZN
605]
gi|397675181|ref|YP_006516716.1| protein translocase subunit secA 1 [Mycobacterium tuberculosis
H37Rv]
gi|433628377|ref|YP_007262006.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140060008]
gi|449065344|ref|YP_007432427.1| preprotein translocase subunit SecA [Mycobacterium bovis BCG str.
Korea 1168P]
gi|61240450|sp|P0A5Y8.1|SECA1_MYCTU RecName: Full=Protein translocase subunit SecA 1; Short=tbSecA
gi|61240454|sp|P0A5Y9.1|SECA1_MYCBO RecName: Full=Protein translocase subunit SecA 1
gi|167016611|sp|A1KNP2.1|SECA1_MYCBP RecName: Full=Protein translocase subunit SecA 1
gi|167016614|sp|A5U7R4.1|SECA1_MYCTA RecName: Full=Protein translocase subunit SecA 1
gi|13883157|gb|AAK47680.1| preprotein translocase SecA subunit [Mycobacterium tuberculosis
CDC1551]
gi|31620016|emb|CAD95360.1| PROBABLE PREPROTEIN TRANSLOCASE SECA1 1 SUBUNIT [Mycobacterium
bovis AF2122/97]
gi|121494777|emb|CAL73258.1| Probable preprotein translocase subunit 1 secA1 [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148507255|gb|ABQ75064.1| translocase [Mycobacterium tuberculosis H37Ra]
gi|148722969|gb|ABR07594.1| preprotein translocase secA1 subunit [Mycobacterium tuberculosis
F11]
gi|224774737|dbj|BAH27543.1| preprotein translocase subunit [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321785|gb|ACT26388.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
KZN 1435]
gi|289540391|gb|EFD44969.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
K85]
gi|289545221|gb|EFD48869.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
T17]
gi|289692520|gb|EFD59949.1| preprotein translocase secA1 [Mycobacterium tuberculosis T92]
gi|289714944|gb|EFD78956.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
T85]
gi|298496510|gb|EFI31804.1| preprotein translocase secA1 subunit [Mycobacterium tuberculosis
94_M4241A]
gi|308336780|gb|EFP25631.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu005]
gi|328460017|gb|AEB05440.1| preprotein translocase subunit secA1 [Mycobacterium tuberculosis
KZN 4207]
gi|339332606|emb|CCC28321.1| putative preprotein translocase SECA1 1 subunit [Mycobacterium
africanum GM041182]
gi|340006409|emb|CCC45590.1| putative preprotein translocase SECA1 1 subunit [Mycobacterium
canettii CIPT 140010059]
gi|341603168|emb|CCC65846.1| probable preprotein translocase subunit 1 secA1 [Mycobacterium
bovis BCG str. Moreau RDJ]
gi|344221076|gb|AEN01707.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CTRI-2]
gi|356595309|gb|AET20538.1| Protein translocase subunit [Mycobacterium bovis BCG str. Mexico]
gi|378546415|emb|CCE38694.1| secA1 [Mycobacterium tuberculosis UT205]
gi|380726567|gb|AFE14362.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
RGTB423]
gi|392055131|gb|AFM50689.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis KZN
605]
gi|395140086|gb|AFN51245.1| protein translocase subunit secA 1 [Mycobacterium tuberculosis
H37Rv]
gi|432155983|emb|CCK53234.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140060008]
gi|440582727|emb|CCG13130.1| putative PREprotein TRANSLOCASE SECA1 1 SUBUNIT [Mycobacterium
tuberculosis 7199-99]
gi|444896794|emb|CCP46059.1| Probable preprotein translocase SecA1 1 subunit [Mycobacterium
tuberculosis H37Rv]
gi|449033852|gb|AGE69279.1| preprotein translocase subunit SecA [Mycobacterium bovis BCG str.
Korea 1168P]
Length = 949
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 496 LGGNVDFLTDQRLRERGL 513
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 537 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 594
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 595 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 654
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 655 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 711
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 712 ----------GITADSLT---------------------------------RKDHEFER- 727
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 728 -----DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 775
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 776 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
>gi|308379458|ref|ZP_07486349.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu010]
gi|308356928|gb|EFP45779.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu010]
Length = 965
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 97 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 156
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 157 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 216
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 217 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 273
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 274 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 333
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 334 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 393
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 394 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 453
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 454 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 511
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 512 LGGNVDFLTDQRLRERGL 529
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 553 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 610
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 611 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 670
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 671 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 727
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 728 ----------GITADSLT---------------------------------RKDHEFER- 743
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 744 -----DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 791
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 792 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 843
>gi|153003651|ref|YP_001377976.1| preprotein translocase subunit SecA [Anaeromyxobacter sp. Fw109-5]
gi|171769464|sp|A7H8E6.1|SECA_ANADF RecName: Full=Protein translocase subunit SecA
gi|152027224|gb|ABS24992.1| preprotein translocase, SecA subunit [Anaeromyxobacter sp. Fw109-5]
Length = 944
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/431 (48%), Positives = 285/431 (66%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGAVLHSGRIAEMKTGEGKTLVATLPSVLNALSGRGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RF GL+ G+I G+ ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 EWMGRLYRFCGLTTGVIVHGLTDRERQDAYHSDITYGQNNEFGFDYLRDNMKFRLQDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG + + Y +V +++ +TV+ K
Sbjct: 201 ---GELNFAIVDEVDSILIDEARTPLIISGPSDESSDLYYRVNQVIPSMIRDQDFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ ++ +++ G+ E L +L+D N V AL+A YR +V Y+V+NG+ LI
Sbjct: 258 SRTIVMSDSGVEKMEKKLGVQNLYDPNAIETLHHVEQALRAHHLYRNEVDYVVKNGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A I++Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRWSDGLHQAVEAKEGVKIEAENQTLATISFQNYFRMYSKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K + + V+ VPTN N+R D + T R K+ E+E+ + G+PVLVG
Sbjct: 378 TEAEEFAKTYNLDVVVVPTNKKNVRKDSEDVVYKTEREKFGALCDEIETRHKKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SV SE +S LLK++G+PH+VLNA K+ REAE VAQAGRK ++TISTNMAGRGTDI
Sbjct: 438 TVSVAKSEVVSSLLKRRGVPHDVLNA--KHHQREAEIVAQAGRKGSVTISTNMAGRGTDI 495
Query: 397 ILGGNPKMLAK 407
ILGGN +M+AK
Sbjct: 496 ILGGNAEMMAK 506
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ E EV LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+ F +SL+DE+ + F
Sbjct: 546 QTATEHDEVVALGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSIFYLSLEDELMRIFG 605
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ L+SR+ E IE + + + G Q E + F IRK+L+E+D+V+ QR+
Sbjct: 606 SERIQG--LMSRMGMKEGEQIEHPWLTKAIEGAQKKVEGHNFDIRKNLLEYDDVMNQQRR 663
Query: 643 HVYDLRQSIL 652
VY LR+ +L
Sbjct: 664 SVYRLRRMVL 673
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 36/56 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
++ E+ + ++ +D W+DHL++M+ L + +R +G ++P +EYK +G F+ M
Sbjct: 794 LRRYEQWLYLQAIDQQWKDHLLSMDHLRQGIGLRGYGQKDPKQEYKKEGYEMFVQM 849
>gi|433643433|ref|YP_007289192.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140070008]
gi|432159981|emb|CCK57296.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140070008]
Length = 949
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 496 LGGNVDFLTDQRLRERGL 513
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 537 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 594
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 595 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 654
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 655 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 711
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 712 ----------GITADSLT---------------------------------RKDHEFER- 727
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 728 -----DDLTRE-------ELLDALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 775
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 776 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
>gi|308232389|ref|ZP_07415906.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu001]
gi|308370199|ref|ZP_07420627.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu002]
gi|308371282|ref|ZP_07424435.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu003]
gi|308372473|ref|ZP_07428802.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu004]
gi|308376038|ref|ZP_07445901.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu007]
gi|308377275|ref|ZP_07441715.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu008]
gi|308378239|ref|ZP_07481997.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu009]
gi|308380621|ref|ZP_07490567.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu011]
gi|308406094|ref|ZP_07495115.2| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu012]
gi|385992487|ref|YP_005910785.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CCDC5180]
gi|385996115|ref|YP_005914413.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CCDC5079]
gi|422814328|ref|ZP_16862693.1| preprotein translocase secA1 [Mycobacterium tuberculosis CDC1551A]
gi|424948876|ref|ZP_18364572.1| preprotein translocase subunit [Mycobacterium tuberculosis
NCGM2209]
gi|308214111|gb|EFO73510.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu001]
gi|308325041|gb|EFP13892.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu002]
gi|308329263|gb|EFP18114.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu003]
gi|308333093|gb|EFP21944.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu004]
gi|308344555|gb|EFP33406.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu007]
gi|308348351|gb|EFP37202.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu008]
gi|308353188|gb|EFP42039.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu009]
gi|308360929|gb|EFP49780.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu011]
gi|308364469|gb|EFP53320.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
SUMu012]
gi|323718109|gb|EGB27291.1| preprotein translocase secA1 [Mycobacterium tuberculosis CDC1551A]
gi|339296069|gb|AEJ48180.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CCDC5079]
gi|339299680|gb|AEJ51790.1| preprotein translocase subunit SecA [Mycobacterium tuberculosis
CCDC5180]
gi|358233391|dbj|GAA46883.1| preprotein translocase subunit [Mycobacterium tuberculosis
NCGM2209]
Length = 937
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 69 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 128
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 129 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 188
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 189 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 245
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 246 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 305
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 306 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 365
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 366 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 425
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 426 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 483
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 484 LGGNVDFLTDQRLRERGL 501
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 525 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 582
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 583 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 642
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 643 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 699
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 700 ----------GITADSLT---------------------------------RKDHEFER- 715
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 716 -----DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 763
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 764 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 815
>gi|256396686|ref|YP_003118250.1| preprotein translocase subunit SecA [Catenulispora acidiphila DSM
44928]
gi|256362912|gb|ACU76409.1| preprotein translocase, SecA subunit [Catenulispora acidiphila DSM
44928]
Length = 928
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+ VQ++GGA LH G+IAEM+T +VT NDYLA+RD+
Sbjct: 81 RHYKVQMMGGAALHLGNIAEMRTGEGKTLVGTLPAYLNALAGKGVHIVTTNDYLAERDSS 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y CDITY N+E GFDYLRDN+A + E++V R
Sbjct: 141 WMGRVHRFLGLKVGVILANMTPAERREQYECDITYGTNNEFGFDYLRDNMAWSREEMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA VDEVDS+LIDE R PL+ISG A + Y +K+ + L + Y V+ K
Sbjct: 201 G---HFFACVDEVDSILIDEARTPLIISGPADQATKWYTDFSKIVDRLAPDVDYEVDEKK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NA+KAKE +++D Y+V NG+ +I+
Sbjct: 258 RTVGILERGVERVEDLLGIDNLYESVNTPLVGYLNNAIKAKELFKKDKDYVVMNGEVMIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA T
Sbjct: 318 DEHTGRILAGRRYNEGMHQAIEAKENVEIKDENQTLATITLQNYFRLYDKLAGMTGTAMT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR+D + + K+E +++ LG+P+LVG+
Sbjct: 378 EAAEFQQIYKLGVVPIPTNRPLIRMDQQDLIYVSEEAKFEAVVEDIAERSALGQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS +L+++G+PH VLNA KY REA VAQAGRK A+T++TNMAGRGTDI
Sbjct: 438 TSVEKSERLSQMLRKRGVPHEVLNA--KYHEREAAIVAQAGRKGAVTVATNMAGRGTDIQ 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP LA ++ R L
Sbjct: 496 LGGNPDDLANGELQQRGL 513
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 13/183 (7%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
L+ + E EV+ LGGL+V+GT HESRRIDNQLRGRAGRQGDPG TRF +SL
Sbjct: 528 DALEKAKRKVKAEHDEVQELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGETRFYLSLG 587
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F IRK+++++
Sbjct: 588 DDLMRMFK---AGMVERVLAMANVPKDVPIEHKMVTRAIASAQTQIEQQNFEIRKNVLKY 644
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEVL QR VY+ R+ +L GA+ + ++ ++D+ I G VD Y W L
Sbjct: 645 DEVLNRQRLVVYEERRKVLDGAD------LEDQVRLMMDDTIAGYVDAATAEGYAEEWDL 698
Query: 691 DKL 693
DKL
Sbjct: 699 DKL 701
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 780 LLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 837
+ R L D LIA + +E + + +E+ER V++ LD WR+HL M+ L +
Sbjct: 728 VTRDVLADELIADIRSGYDAREEQLGEQITRELERRVVLSVLDRKWREHLYEMDYLQEGI 787
Query: 838 NVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+R+ R+PL EY+ +G F +M+ A + +V
Sbjct: 788 GLRAMAQRDPLVEYQREGYAMFQAMMDAIKEESV 821
>gi|433636335|ref|YP_007269962.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140070017]
gi|432167928|emb|CCK65450.1| Putative preprotein translocase SecA1 1 subunit [Mycobacterium
canettii CIPT 140070017]
Length = 949
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ +PHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRRVPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 496 LGGNVDFLTDQRLRERDL 513
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 537 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 594
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 595 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 654
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 655 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 711
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 712 ----------GITADSLT---------------------------------RKDHEFER- 727
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 728 -----DDLTRE-------ELLDALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 775
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 776 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
>gi|385800796|ref|YP_005837200.1| protein translocase subunit secA [Halanaerobium praevalens DSM
2228]
gi|309390160|gb|ADO78040.1| protein translocase subunit secA [Halanaerobium praevalens DSM
2228]
Length = 855
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
RH+DVQ++GG VLH G IAEMKT V+TVNDYLA+RD+
Sbjct: 82 FRHYDVQLLGGIVLHQGKIAEMKTGEGKTLAATLPVYLNALTGKGVHVITVNDYLAERDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLG+SVG+I GM P R+ Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 142 EWMGQIYRFLGMSVGVILSGMTPAARKEAYNCDITYGTNNEFGFDYLRDNMAYKEENLVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+LIDE R PL+ISG + + Y +V L + Y ++ K
Sbjct: 202 R---DHHYAILDEVDSILIDEARTPLIISGPVQEKSSDYKKFNRVIPALEAEVDYEIDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
N V LTE G++ AE L ++L+ E + +N ALKA ++D YIV++G I
Sbjct: 259 NKLVTLTEAGVSKAEKKLNLDNLYSEENFKLNHQLNQALKAHTLMKKDRDYIVKDGAVKI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV E RR+SEG+HQA+EAKEG+++Q S A+IT Q+ F++Y KL+GMTGTA+
Sbjct: 319 VDEFTGRVMEGRRYSEGLHQAIEAKEGVEVQKGSQTFAKITLQNFFRMYNKLAGMTGTAE 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF+K++ M V+ +PTN P IR D+P F K+++ E+ +++ G+PVLVG
Sbjct: 379 TEAEEFIKIYDMSVVVIPTNEPMIREDMPDLVFTNKEAKYKHVIAEITRLYQKGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +ENSE LS LK+ +PH VLNA K REAE + AG+K ++TI+TNMAGRGTDI
Sbjct: 439 TADIENSEMLSRELKRARVPHQVLNA--KNHEREAEIIKDAGQKKSVTIATNMAGRGTDI 496
Query: 397 ILG 399
+LG
Sbjct: 497 VLG 499
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHV+GT HESRRIDNQLRGRAGRQGDPG+++F VSL+D++ + F D
Sbjct: 499 GEGVVELGGLHVLGTERHESRRIDNQLRGRAGRQGDPGASQFYVSLEDDLLRLFGSDKIN 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ +I DED P+E I + Q E F IRK+++E+D+VL QR+ +Y
Sbjct: 559 G--LLDKIGLDEDKPVEHKLISNSIERAQQKVEGRNFDIRKAILEYDDVLNKQREVIYAQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+++LT A ++I ++ +++I+ ++ HP W L+ +L
Sbjct: 617 RKTLLTTA--ELEEKIAGMLEQFLEDIMEMHISEDLHPDEWDLEGML 661
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 782 RKYLGDILIASYLNVVQESR--YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
R + + + S L+ QE R D + + + ++ +D W HL NM+ L + +
Sbjct: 683 RAQIKEKITLSSLSSYQEKREKIDSDRFNSIIKFLALRVIDRKWMTHLDNMDELRQGIGL 742
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQE 886
R+ G ++PL EYK + F + ++ R VE+ Q +E+QE
Sbjct: 743 RAIGQKDPLTEYKFESFDMFNELTASIREDIVETAFQI---EVEAQE 786
>gi|315917746|ref|ZP_07913986.1| protein translocase subunit secA [Fusobacterium gonidiaformans ATCC
25563]
gi|313691621|gb|EFS28456.1| protein translocase subunit secA [Fusobacterium gonidiaformans ATCC
25563]
Length = 889
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/453 (47%), Positives = 293/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G I EMKT V+TVNDYLA RD
Sbjct: 81 LRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATAPVYLNALSGRGVHVITVNDYLATRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+ FLGL+ G+I GM ++RR Y+CDITY NSE GFDYLRDN+ A+ + V
Sbjct: 141 EMMGRVYSFLGLTSGVIVNGMYGKDRREAYQCDITYGTNSEFGFDYLRDNMVASVGEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++ IVDEVDS+LIDE R PL+ISG +S + Y VA +V LL +
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGASSDAIKWYQVAYQVVSLLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K ++ LTE+G++ E L+ ++L+ EN ++ A
Sbjct: 258 IKEKKEMNIPDEKWGDYEVDEKAKNIVLTEKGVSKVEKLLKLDNLYSPENVEITHYINQA 317
Query: 195 LKAKEFYRRDVQYIVRN-GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR+ G+ +II+E TGR E RR+S+G+HQA+EAKE ++I ++ +
Sbjct: 318 LKAKELFKRDRDYLVRDTGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEAVRIAGENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTN P IR D + T
Sbjct: 378 ATITLQNYFRMYQKLSGMTGTAETEATEFVHTYGLEVVVIPTNEPVIRKDHSDLVYKTKE 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K E ++E +++ G+PVLVG+ S+++SE LSDL+K++GIPHNVLNA KY A+EAE
Sbjct: 438 EKLEAIIDKIEELYKKGQPVLVGTVSIQSSEELSDLIKKKGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGRK ++TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 VAQAGRKGSVTIATNMAGRGTDIMLGGNPEFLA 528
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 73/365 (20%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A++ G A Y +L C E EV LGGL+++GT HESRRIDNQLRGR+GR
Sbjct: 528 AIHEAGSRDAENYSEILSKYVKQCEEERKEVLALGGLYILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG ++F +SL+D++ + F D AV + ++ PI I + + Q E
Sbjct: 588 QGDPGESQFFLSLEDDLMRLFGSDRVKAV--MEKLGLPHGEPITHKMINKAIENAQTKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ Q R +I NE A+V E + N+
Sbjct: 646 SRNFGIRKNLLEFDDVMNKQ-------RTAIYESRNE-----------ALVKEDLKSNIL 687
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ H ++ K F + G++ +D DI
Sbjct: 688 SMLHDVIYT-----KTFQHLVGEVKEDW----------------------DIQ------- 713
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNL--LRKYLGDILIASYLNVVQ 798
L ++LA D + ++ + + N+ L D L A Y +
Sbjct: 714 ---------------GLAKYLAERFDYIIEDEKEYMSMNVEDYAALLYDRLSAVYEE--K 756
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
E+R M+++E+ +L + +D WR+HL ++ L + +R++G +NP+ EYK+
Sbjct: 757 ENRMGSEIMRKIEKYILFEVVDARWREHLKALDGLREGIYLRAYGQKNPVTEYKLVSSEI 816
Query: 859 FISML 863
+ ML
Sbjct: 817 YEKML 821
>gi|336066792|ref|YP_004561650.1| preprotein translocase subunit SecA [Erysipelothrix rhusiopathiae
str. Fujisawa]
gi|334296738|dbj|BAK32609.1| preprotein translocase, SecA subunit [Erysipelothrix rhusiopathiae
str. Fujisawa]
Length = 780
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/425 (48%), Positives = 283/425 (66%), Gaps = 29/425 (6%)
Query: 6 VQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWMER 42
VQ++G +LH G IAEMKT V+TVN+YLAQRDAEWM
Sbjct: 84 VQLMGAIILHRGDIAEMKTGEGKTLTAIMPTYLNALEGKGVHVITVNEYLAQRDAEWMGE 143
Query: 43 VHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKP 102
+HRFLGL+VG+ R + P +R Y CDITYT NSE+GFDYLRDN+ EQ V+R P
Sbjct: 144 IHRFLGLTVGINVRALSPSGKREVYECDITYTTNSEVGFDYLRDNMVTKVEQRVLR---P 200
Query: 103 FHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVE 162
++A+VDEVDS+LIDE R PL+ISG A Y + K A+ L +G Y +++K+ +V+
Sbjct: 201 LNYALVDEVDSILIDESRTPLIISGGARDGAKLYESSDKFAKKLSEGSDYVIDVKSKTVQ 260
Query: 163 LTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELT 221
LTE G+ AE + ++L+D +N + NALKA D++Y+V+N + +I+++ T
Sbjct: 261 LTEAGVEKAERTFKVDNLYDLDNTSLVHHINNALKANYIMLNDIEYVVQNNEVVIVDQFT 320
Query: 222 GRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKE 281
GR+ E R +S+G+HQA+ AKEG+ I+ ++V +A +TYQ+ F+LY KLSGMTGTAKTEE+E
Sbjct: 321 GRLMEGREYSDGLHQALCAKEGVTIKQETVTLATVTYQNFFRLYNKLSGMTGTAKTEEEE 380
Query: 282 FLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVE 341
FL+++ M V+EVPTN P R DLP + T + K+E + V + G+PVLVG+ +VE
Sbjct: 381 FLEIYNMRVLEVPTNRPIAREDLPDLVYGTRKAKFEALIETVRELNEKGQPVLVGTVAVE 440
Query: 342 NSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGN 401
SEYLS ++KQ+ I H VLNA K AREA+ + +AGRK ++TI+TNMAGRGTDI L
Sbjct: 441 TSEYLSMMMKQRKIKHEVLNA--KNHAREAQIIEKAGRKGSVTIATNMAGRGTDIKLDEE 498
Query: 402 PKMLA 406
+ L
Sbjct: 499 SRALG 503
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 9/163 (5%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E + LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VS +D++ + +
Sbjct: 498 ESRALGGLAVLGSERHESRRIDNQLRGRSGRQGDPGMSRFFVSFEDDLMLRHG--SERFE 555
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++ S++ D+ IE I +Q+ Q E F IRK+L+++D+VL QR+ +Y+ R
Sbjct: 556 NVYSQLG---DVAIENKVITKQISAAQRRVEGVNFDIRKTLLDYDDVLRQQREIIYEQRD 612
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+L NE I + + VV + I P + +S+DK
Sbjct: 613 YVL--ENEDVHGIIKEMYKRVVSDTIASYTIP--ESKDFSIDK 651
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
VE+ V++ +D W DH+ M++L +++RS+ PL+ Y +G F ML
Sbjct: 707 VEKEVVLNMIDRSWVDHIDAMSKLREGIHLRSYAQDKPLQAYVTEGFEMFEEML 760
>gi|160946482|ref|ZP_02093691.1| hypothetical protein PEPMIC_00446 [Parvimonas micra ATCC 33270]
gi|158447598|gb|EDP24593.1| preprotein translocase, SecA subunit [Parvimonas micra ATCC 33270]
Length = 906
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/452 (48%), Positives = 287/452 (63%), Gaps = 50/452 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ+IGG VLH+G IAEMKT +VTVNDYLA+RD
Sbjct: 78 MKHYRVQLIGGVVLHEGRIAEMKTGEGKTLVATLPSYLNALTGKGVHIVTVNDYLAKRDK 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++H FLGL VG I G+ +ERR NY CDITY NSE GFDYLRDN+ E+LV
Sbjct: 138 EWMGKIHEFLGLKVGCILHGLSNDERRENYNCDITYGTNSEFGFDYLRDNMVVYKEELVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R ++AIVDEVDS+LIDE R PL+ISGE + Y +A K
Sbjct: 198 RG---LNYAIVDEVDSILIDEARTPLIISGEGDQSTDLYALADKFVKSLKGRIADPSEEN 254
Query: 144 ------ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALK 196
EL + + + V K+ + LTE G AE +L D N A + ALK
Sbjct: 255 EDFYNRELREETVDFVVNEKHKTANLTEIGTEKAEDFFGLVNLSDPVNMEVAHHINQALK 314
Query: 197 AKEFYRRDVQYIV-RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
A +RDV Y+V +G+ LI++E TGR+ E RR+SEG+HQA+EAKEG++I+++S +A
Sbjct: 315 ANNTMQRDVDYVVSEDGEILIVDEFTGRIMEGRRYSEGLHQAIEAKEGVEIKSESRTLAT 374
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
ITYQ+ F++Y KL+GMTGTAKTEE EF +++ M VIE+PTN P IR+D + + T K
Sbjct: 375 ITYQNYFRMYEKLAGMTGTAKTEEDEFNEIYHMDVIEIPTNKPVIRIDHHDRVYLTEEAK 434
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
++ +E+E + G+PVLVG+ S+E SE LS +LK++ I H+VLNA K+ AREAE VA
Sbjct: 435 FKAIVEEIERIHSTGQPVLVGTISIEISELLSAMLKKKRIEHDVLNA--KFHAREAEIVA 492
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
QAG +TI+TNMAGRGTDI+LGGNP +AK
Sbjct: 493 QAGVYGKVTIATNMAGRGTDILLGGNPDFMAK 524
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 90/149 (60%), Gaps = 20/149 (13%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD--------EMFQKFSFDTS 586
GGL ++GT HESRRIDNQLRGRAGRQGDPG +RF VSL D E QKF+ + +
Sbjct: 580 GGLFIVGTERHESRRIDNQLRGRAGRQGDPGESRFFVSLSDNLMRLFGGEAIQKFAMNRN 639
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ D D +E ++ R + Q E FGIRK+++++D+V+ VQR +Y
Sbjct: 640 Y----------DPDEVLEFKSVTRGIERSQERVEANNFGIRKNVLKYDDVMNVQRNVIYK 689
Query: 647 LRQSILTGAN--ESCSQQIFQYMQAVVDE 673
R+++L G + ++ + + +++ + V++
Sbjct: 690 ERRAVLDGEDMKDTIQEMLIEFIDSTVEQ 718
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 781 LRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR 840
L+ Y+ D+ Y +E + + M+E+ER +++ +D W DH+ M++L + +R
Sbjct: 757 LKGYIIDVSQKFYAE--KEEQIGEEQMREIERVIMLMVVDRKWMDHIDAMDQLRQGIGIR 814
Query: 841 SFGHRNPLEEYKIDGCRFFISM 862
S+G ++P+ Y +G F M
Sbjct: 815 SYGQQDPVRAYGAEGFEMFNEM 836
>gi|210620512|ref|ZP_03292088.1| hypothetical protein CLOHIR_00031, partial [Clostridium hiranonis
DSM 13275]
gi|210155322|gb|EEA86328.1| hypothetical protein CLOHIR_00031 [Clostridium hiranonis DSM 13275]
Length = 711
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/448 (46%), Positives = 289/448 (64%), Gaps = 33/448 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG VLH+G IAEMKT VVTVNDYLA+RD
Sbjct: 79 LRHYKVQLIGGMVLHEGRIAEMKTGEGKTLVATCPVYLNALEGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +V+ FLG++VG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ+V
Sbjct: 139 DQMAKVYEFLGMTVGVIVHGQSPKVRKKQYDCDITYGTNNEFGFDYLKDNMVIHEEQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+L+DE R PL+ISG K Y A L + Y E K
Sbjct: 199 R---ELNYAIVDEVDSILVDEARTPLIISGPGDKSTHLYTDANTFVNTL-KPDDYEQEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTE G+ AEM +++ D + + ALKA +RDV Y+ ++G+ +I
Sbjct: 255 DKAVSLTESGVKKAEMYFNVDNITDVAHTELYHHINQALKAHVIMKRDVDYVEKDGEIVI 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK+Q +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVQRESKTLATITFQNYFRMYKKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN P +R DLP + + RGK+ ++ +PVLVG
Sbjct: 375 TEEEEFKAIYKMDVFQVPTNKPMVREDLPDTVYKSTRGKFNAVADDIAERHAKKQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LSD+L+++GI H VLNA KY +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSEILSDILRKRGIKHEVLNA--KYHEKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLAKKIIEDRLLLLLTREALN 424
+LGGNP +A I++ + T E +N
Sbjct: 493 LLGGNPSFMA---IKEMKKMNFTEETIN 517
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
TY + K + E EV GGL +IGT HESRRIDNQLRGRAGRQGDPGS+RF +
Sbjct: 540 TYQKLYKQFKEQTDAEQQEVLAAGGLCIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYI 599
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
+L D++ + F + L+ +I +EDMPIE + + + Q E FGIRK ++
Sbjct: 600 ALDDDLMRLFGSERIQG--LVDKIGLEEDMPIEHRMLTKSIESAQKKVEGKNFGIRKHVL 657
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL 682
E+D+V+ QR+ +Y R+ +L G E+ +QI Q ++ II VD
Sbjct: 658 EYDDVMNKQREIIYKERRRVLAG--ENLQEQI----QDMIHSIIVDAVDEF 702
>gi|453078598|ref|ZP_21981325.1| preprotein translocase subunit SecA [Rhodococcus triatomae BKS
15-14]
gi|452756288|gb|EME14703.1| preprotein translocase subunit SecA [Rhodococcus triatomae BKS
15-14]
Length = 958
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 284/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 82 KHYIVQIMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNAIGGQGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I GM P +RR+ Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRFLGLETSVILSGMNPAQRRTAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + HY V++K
Sbjct: 202 G---HNFAIVDEVDSILIDEARTPLIISGPADASSKWYGEFARIAPLLRRDTHYEVDIKK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L +L++ N P ++ NA+KAKE Y+RD YIVR+G+ +I+
Sbjct: 259 RTVGVHEAGVEFVEDQLGIENLYEAANSPLVSYLNNAIKAKELYQRDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRILVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + + + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 379 EAAELHQTYDLGVIPIPTNRPMVRVDQGDLIYKTEAAKFDAVVDDVAERHANGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++GI HNVLNA K+ +EA+ VA+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGIAHNVLNA--KFHEQEAQIVAEAGRTGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 11/180 (6%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + + EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 531 LAKVQAQVKADADEVRGAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 590
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++ F+ + +++R+ +D+PIE + + + Q E+ + IRK+++++DEV
Sbjct: 591 LMRR--FNGAALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNYEIRKNVLKYDEV 648
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+ QR +YD R+ IL G E Q+ ++++ +++ VD Y W LD+L
Sbjct: 649 MNQQRTVIYDERRRILAG--EDMEGQV----ESMITDVVTAYVDGATAEGYVEDWDLDQL 702
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML
Sbjct: 764 MRELERRVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFSAMLEGL 823
Query: 867 RRLTVESL--VQYWSSPMESQ 885
+ +V L +Q ++P + Q
Sbjct: 824 KEESVGFLFNLQVEAAPAQPQ 844
>gi|323342406|ref|ZP_08082638.1| preprotein translocase subunit SecA [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463518|gb|EFY08712.1| preprotein translocase subunit SecA [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 780
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/425 (48%), Positives = 283/425 (66%), Gaps = 29/425 (6%)
Query: 6 VQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWMER 42
VQ++G +LH G IAEMKT V+TVN+YLAQRDAEWM
Sbjct: 84 VQLMGAIILHRGDIAEMKTGEGKTLTAIMPTYLNALEGKGVHVITVNEYLAQRDAEWMGE 143
Query: 43 VHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKP 102
+HRFLGL+VG+ R + P +R Y CDITYT NSE+GFDYLRDN+ EQ V+R P
Sbjct: 144 IHRFLGLTVGINVRALSPSGKREVYECDITYTTNSEVGFDYLRDNMVTKVEQRVLR---P 200
Query: 103 FHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVE 162
++A+VDEVDS+LIDE R PL+ISG A Y + K A+ L +G Y +++K+ +V+
Sbjct: 201 LNYALVDEVDSILIDESRTPLIISGGARDGAKLYESSDKFAKKLSEGSDYVIDVKSKTVQ 260
Query: 163 LTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELT 221
LTE G+ AE + ++L+D +N + NALKA D++Y+V+N + +I+++ T
Sbjct: 261 LTEAGVEKAERTFKVDNLYDLDNTSLVHHINNALKANYIMLNDIEYVVQNNEVVIVDQFT 320
Query: 222 GRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKE 281
GR+ E R +S+G+HQA+ AKEG+ I+ ++V +A +TYQ+ F+LY KLSGMTGTAKTEE+E
Sbjct: 321 GRLMEGREYSDGLHQALCAKEGVTIKQETVTLATVTYQNFFRLYNKLSGMTGTAKTEEEE 380
Query: 282 FLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVE 341
FL+++ M V+EVPTN P R DLP + T + K+E + V + G+PVLVG+ +VE
Sbjct: 381 FLEIYNMRVLEVPTNRPIAREDLPDLVYGTRKAKFEALIETVRELNEKGQPVLVGTVAVE 440
Query: 342 NSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGN 401
SEYLS ++KQ+ I H VLNA K AREA+ + +AGRK ++TI+TNMAGRGTDI L
Sbjct: 441 TSEYLSMMMKQRKIKHEVLNA--KNHAREAQIIEKAGRKGSVTIATNMAGRGTDIKLDEE 498
Query: 402 PKMLA 406
+ L
Sbjct: 499 SRALG 503
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 9/163 (5%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E + LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VS +D++ + +
Sbjct: 498 ESRALGGLAVLGSERHESRRIDNQLRGRSGRQGDPGMSRFFVSFEDDLMLRHG--SERFE 555
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++ S++ D+ IE I +Q+ Q E F IRK+L+++D+VL QR+ +Y+ R
Sbjct: 556 NVYSQLG---DVAIENKVITKQISAAQRRVEGVNFDIRKTLLDYDDVLRQQREIIYEQRD 612
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+L NE I + + VV + I P + +S+DK
Sbjct: 613 YVL--ENEDVHGIIKEMYKRVVSDTIASYTIP--ESKDFSIDK 651
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
VE+ V++ +D W DH+ M++L +++RS+ PL+ Y +G F ML
Sbjct: 707 VEKEVVLNMIDRSWVDHIDAMSKLREGIHLRSYAQDKPLQAYVTEGFEMFEEML 760
>gi|376250792|ref|YP_005137673.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC03]
gi|372112296|gb|AEX78355.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC03]
Length = 853
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVNDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 KVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|376292755|ref|YP_005164429.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC02]
gi|372110078|gb|AEX76138.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC02]
Length = 853
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|161485608|ref|YP_387578.2| preprotein translocase subunit SecA [Desulfovibrio alaskensis G20]
gi|166918872|sp|Q313L3.2|SECA_DESDG RecName: Full=Protein translocase subunit SecA
gi|342906371|gb|ABB37883.2| preprotein translocase, SecA subunit [Desulfovibrio alaskensis G20]
Length = 864
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/429 (47%), Positives = 286/429 (66%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG LH G IAEM+T ++TVNDYLA+RDA
Sbjct: 81 MRHYDVQMVGGIALHSGKIAEMRTGEGKTLVATLPAALNALTGKGVHLITVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLSVG+I G+ EERR+ Y DITY N+E GFDYLRDN+ EQLV
Sbjct: 141 EWMGKIYNFLGLSVGVIVHGLNDEERRAAYASDITYGTNNEFGFDYLRDNMKFYKEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAIVDEVDS+LIDE R PL+ISG + + Y + L + HYTV+ K
Sbjct: 201 R---PHHFAIVDEVDSILIDEARTPLIISGPSDESTGLYRRVNDIIPRLKRDTHYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ LT+EG+ AE L ++L+D +N + ++ ALKA + RDV YIV++ + +I
Sbjct: 258 ARAAALTDEGVQEAEKLLGLDNLYDPQNISFQHHILQALKAHSIFTRDVDYIVKDDQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+K++A++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEGVKVEAENQTLASITFQNYFRMYEKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V+ +PTN P IR D P + T K+ +E+ + G+PVLVG
Sbjct: 378 TEAVEFQQIYDLEVVNIPTNKPMIRKDQPDSIYRTRPEKFNAIVEEIARLHHKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE ++ +LK++G+PHNVLNA K +EAE VA+AG+ +TI+TNMAGRGTDI
Sbjct: 438 TISIETSELIAGMLKKKGVPHNVLNA--KQHEKEAEIVAEAGQAGKVTIATNMAGRGTDI 495
Query: 397 ILG-GNPKM 404
+LG G P++
Sbjct: 496 VLGEGVPQL 504
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 176/367 (47%), Gaps = 70/367 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +LGGL+++GT HESRRIDNQLRGR+GRQGDPG TRF +SL+D++ + F D
Sbjct: 498 GEGVPQLGGLYILGTERHESRRIDNQLRGRSGRQGDPGETRFFLSLEDDLLRLFGSDR-- 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ E PIE + R + Q E + F IRK+L+++D V+ QR+ +Y L
Sbjct: 556 IAGLMERLGMQEGEPIENKMVSRAIENAQKRVEGHNFEIRKTLLDYDNVMNQQREVIYSL 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ + + + +++ ++++I PL+ + +LD+ + AIA ++ +
Sbjct: 616 RRDTMM--EDDLEPSVHEFLDDIIEDIYA----PLEQTKGKALDE--ETHAAIAARLEET 667
Query: 708 LF-AGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
F + + + LK E+ +L P+LP ++ + + LKR
Sbjct: 668 FFLSRVYPEFALKGSEQQEKL----------PELPSAADVKKAVESMLEKLKRDAGPV-- 715
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
GDIL R L++ LD W++H
Sbjct: 716 ------------------YGDIL----------------------RYFLLEELDRNWKEH 735
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML-----SATRRLTVESL--VQYWS 879
L+NM+ L + +R +G R+P +EYK +G F +ML S R LT L V+ +
Sbjct: 736 LLNMDHLRDGIGLRGYGQRDPKQEYKREGFSLFQNMLWSIKESVFRALTRLRLQRVEEAA 795
Query: 880 SPMESQE 886
P E E
Sbjct: 796 DPAEQPE 802
>gi|145593530|ref|YP_001157827.1| preprotein translocase subunit SecA [Salinispora tropica CNB-440]
gi|145302867|gb|ABP53449.1| protein translocase subunit secA [Salinispora tropica CNB-440]
Length = 971
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 288/442 (65%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+IAEMKT V+TVNDYLA+RDA
Sbjct: 80 RPYDVQVMGGAALHFGNIAEMKTGEGKTLTSVMPVYLNALSGKGVHVITVNDYLAERDAA 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH FLGL+VG++ E R+ Y CDITY N+E GFDYLRDN+A + E LV R
Sbjct: 140 WMGRVHEFLGLTVGVVLPNRPAAEHRAAYECDITYGTNNEFGFDYLRDNMAWSKEDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FA+VDEVDS+LIDE R PL+ISG A Y A V L G Y V
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPAEHSARWYGEFAAVVARLQSGKDGEGDYEV 256
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ +V +TE G+ E L ++L++ N P ++ NA+KAKE ++RD YIV G+
Sbjct: 257 DHAKRTVAVTERGVGKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELFKRDKDYIVSEGE 316
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTG
Sbjct: 317 VLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKQENQTLATITLQNYFRLYEKLAGMTG 376
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF K++++ V+ +PT+ P +R D + T + K+ +++ G+PV
Sbjct: 377 TAQTEAGEFNKVYKVGVVTIPTHRPMVREDRSDVIYKTEKAKFNAVVEDIAERHHAGQPV 436
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVENSE LS LL+++GIPH+VLNA K+ AREAE VAQAGRK A+T++TNMAGRG
Sbjct: 437 LVGTVSVENSEILSQLLRRRGIPHSVLNA--KFHAREAEIVAQAGRKGAVTVATNMAGRG 494
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGNP+ LA + R L
Sbjct: 495 TDILLGGNPEFLAANDLRQRGL 516
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 4/162 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C +E EV +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD
Sbjct: 532 VLPTWKQACDDEAEEVSAVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQD 591
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F AV + R ED+PIE + RQ+ Q E IRK+++++DE
Sbjct: 592 ELMKRFRSGAVEAV--MERFNIPEDVPIESKMVTRQIKTAQAQIESQNAEIRKNVLKYDE 649
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
V+ QR+ +Y R +L G E S Q+ + VV+ + G
Sbjct: 650 VMNKQRQVIYAERLRVLNG--EDLSDQVRNMIDDVVEAYVRG 689
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++ER VL++ +D WR+HL M+ L +++R++ R+P+ EY+ +G F +M+
Sbjct: 761 VRQLERMVLLQVIDRKWREHLYEMDYLQEGISLRAYAQRDPVVEYQREGFDMFATMMDGI 820
Query: 867 RRLTV 871
+ TV
Sbjct: 821 KEETV 825
>gi|38233306|ref|NP_939073.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
NCTC 13129]
gi|81829952|sp|Q6NIR8.1|SECA1_CORDI RecName: Full=Protein translocase subunit SecA 1
gi|38199565|emb|CAE49216.1| Translocase protein [Corynebacterium diphtheriae]
Length = 853
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 KVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|375290366|ref|YP_005124906.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
241]
gi|375292583|ref|YP_005127122.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
INCA 402]
gi|376245199|ref|YP_005135438.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC01]
gi|376256603|ref|YP_005144494.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
VA01]
gi|371580037|gb|AEX43704.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
241]
gi|371582254|gb|AEX45920.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
INCA 402]
gi|372107829|gb|AEX73890.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC01]
gi|372119120|gb|AEX82854.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
VA01]
Length = 853
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|376242341|ref|YP_005133193.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
CDCE 8392]
gi|372105583|gb|AEX71645.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
CDCE 8392]
Length = 853
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 KVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IATDIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKEAVKEETVRQL 829
>gi|419860313|ref|ZP_14382958.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
gi|387983521|gb|EIK56998.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
Length = 853
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|376253803|ref|YP_005142262.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
PW8]
gi|376284198|ref|YP_005157408.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
31A]
gi|371577713|gb|AEX41381.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
31A]
gi|372116887|gb|AEX69357.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
PW8]
Length = 853
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 KVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|407648163|ref|YP_006811922.1| preprotein translocase subunit SecA [Nocardia brasiliensis ATCC
700358]
gi|407311047|gb|AFU04948.1| preprotein translocase subunit SecA [Nocardia brasiliensis ATCC
700358]
Length = 938
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/453 (46%), Positives = 290/453 (64%), Gaps = 38/453 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G+IAEMKT +VT NDYLA+RD+E
Sbjct: 72 KHYKVQIMGGAALHTGNIAEMKTGEGKTLTSVLPAYLNAISGDGVHIVTTNDYLAKRDSE 131
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I GM P +RR +Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 132 WMGRVHRFLGLEVGVILSGMTPAQRRVSYGADITYGTNNEFGFDYLRDNMTHSLDDLVQR 191
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FA+VDEVDS+LIDE R PL+ISG A Y A++A LL + LHY V++K
Sbjct: 192 G---HNFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKKDLHYEVDIKK 248
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ E L ++L++ N P ++ NA+KAKE Y RD YIVR+G+ +I+
Sbjct: 249 RTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTRDKDYIVRDGEVIIV 308
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++IQ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 309 DEFTGRILVGRRYNEGMHQAIEAKEAVEIQPENQTLATITLQNYFRLYDKLSGMTGTAET 368
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + V+ +PTN P IR D + T K+ +V +PVL+G+
Sbjct: 369 EAAELHQIYNLGVVPIPTNKPMIRQDQSDLIYKTEEAKFAAVVDDVTERHERDQPVLIGT 428
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++GI H VLNA K+ EA +A+AGR A+T++TNMAGRGTD++
Sbjct: 429 TSVERSEYLSKQFTKRGIAHTVLNA--KFHENEAAIIAEAGRPGAVTVATNMAGRGTDVV 486
Query: 398 LGGNPKMLAKKIIEDRLLLLLTREALN-VEVDD 429
LGGNP ++A L+L +E L+ VE D
Sbjct: 487 LGGNPDIIAD--------LILRKEGLDPVETPD 511
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 166/365 (45%), Gaps = 69/365 (18%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+L L+ + + V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S
Sbjct: 517 WLPTLEQVKSQTKADADRVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLS 576
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L DE+ ++F+ A+ ++R+ +D+PIE + + + Q E+ F IRK++++
Sbjct: 577 LGDELMRRFNGAALEAI--MTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLK 634
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WS 689
+DEV+ QR +Y R IL G E Q+ Q ++ ++I VD Y W
Sbjct: 635 YDEVMNQQRTVIYGERNRILRG--EDMEGQV----QEMITDVITAYVDGATAEGYVEDWD 688
Query: 690 LDKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL 746
LDKL LK + + D GD + EEL + D ++ Y
Sbjct: 689 LDKLWTALKTLYPVRVRHQDLAGETAVGDAGDLTREELLDALLDDAHDAY---------- 738
Query: 747 FRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVY 806
R+ + + D L G R NL R+ L
Sbjct: 739 ----ERREAEI--------DGLAGQGSMR---NLERQVL--------------------- 762
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML
Sbjct: 763 ---------LSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFSAMLEGL 813
Query: 867 RRLTV 871
+ +V
Sbjct: 814 KEESV 818
>gi|404493976|ref|YP_006718082.1| preprotein translocase subunit SecA [Pelobacter carbinolicus DSM
2380]
gi|123573656|sp|Q3A245.1|SECA_PELCD RecName: Full=Protein translocase subunit SecA
gi|77546000|gb|ABA89562.1| preprotein translocase, SecA subunit [Pelobacter carbinolicus DSM
2380]
Length = 896
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 288/450 (64%), Gaps = 47/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT V+TVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHKGKIAEMKTGEGKTLVATLAAYLNALPAKGVHVITVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+HR+LGL+VG I G+ +R+ Y CDITY N+E GFDYLRDN+ + + V
Sbjct: 141 EWMGRIHRYLGLTVGCIVHGLDDRQRKEAYACDITYGTNNEFGFDYLRDNMKFSLDDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R P +AIVDEVDS+LIDE R PL+ISG + Y ++ +L +G
Sbjct: 201 R---PLSYAIVDEVDSILIDEARTPLIISGPSESSSELYYSVNRIIPMLEKGETIESRDG 257
Query: 151 -----------HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAK 198
+T++ K + LTE+G+A E L +L+D N V ALKA
Sbjct: 258 RVGQTVREYTGDFTIDEKAKTASLTEDGVAKVERLLGVENLYDPGNIELLHHVNQALKAH 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
++RDV Y+V++G+ +I++E TGR+ RRWS+G+HQAVEAKEG+KI++++ +A IT+
Sbjct: 318 ALFKRDVDYVVKDGEVMIVDEFTGRLMPGRRWSDGLHQAVEAKEGVKIESENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KL+GMTGTA TE EF +++ + V+ +PTN P R D + T R K+
Sbjct: 378 QNYFRMYDKLAGMTGTADTEATEFNQIYSLDVMVIPTNRPLARKDEGDVIYKTNREKFLA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+++ G+P+LVG+ S+ENSE LS +L+++G+PHNVLNA K+ REAE VAQAG
Sbjct: 438 VVEDIIERHAGGQPILVGTISIENSEVLSSMLRKRGVPHNVLNA--KHHEREAEIVAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKK 408
RK A+TI+TNMAGRGTDIILGGNP +LA++
Sbjct: 496 RKGAVTIATNMAGRGTDIILGGNPDLLAQR 525
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 177/369 (47%), Gaps = 71/369 (19%)
Query: 507 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGS 566
P AL +++K EV C+ E +V GGL+++GT HESRRIDNQLRGRAGRQGDPG+
Sbjct: 533 PEAALAQ-ALVKYQEV-CAQEKQDVLAAGGLYILGTERHESRRIDNQLRGRAGRQGDPGA 590
Query: 567 TRFMVSLQDEMFQKF-SFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
+RF +SL+D++ + F S ++ +D R+ E PIE I + + Q E + F
Sbjct: 591 SRFYLSLEDDLLRIFGSHRVAYIMD---RLKIPEGEPIEHRFISKAIANAQKKVEAHNFD 647
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
IRK L+E+D+V+ QR +Y R+ +L G
Sbjct: 648 IRKHLIEYDDVMNTQRNVIYAQRREVLGG------------------------------- 676
Query: 686 RYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPN 745
++L + F AI ++++D+ A + KS E + +N +F PP
Sbjct: 677 -----EQLPETFAAIIDEMVEDIVATFCPE---KSAPE--DWGWASLNEDFFSQFNMPPA 726
Query: 746 LFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV 805
L + + DLT ++ ++L + A +E+ +
Sbjct: 727 --------------PLEVPASDLT--------PTVMLEHLKQQVDARLQE--REAEFTPP 762
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M + + +L++T+D W+DHL++++ L + +R + RNP EEYK + F+ M+
Sbjct: 763 VMLHLMKVLLLQTIDAQWKDHLLSIDHLKEGIGLRGYAQRNPKEEYKREAYELFLQMMGR 822
Query: 866 TRRLTVESL 874
R+ V+ L
Sbjct: 823 IRQEVVQKL 831
>gi|260887224|ref|ZP_05898487.1| preprotein translocase, SecA subunit [Selenomonas sputigena ATCC
35185]
gi|330839016|ref|YP_004413596.1| Protein translocase subunit secA [Selenomonas sputigena ATCC 35185]
gi|260863286|gb|EEX77786.1| preprotein translocase, SecA subunit [Selenomonas sputigena ATCC
35185]
gi|329746780|gb|AEC00137.1| Protein translocase subunit secA [Selenomonas sputigena ATCC 35185]
Length = 842
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 80 MRHFDVQMIGGICLHEGKIAEMRTGEGKTLVATLPVYLNALEGKGVHMVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RV+RFLGLSVGLI M ER+ Y D+T+ N+E GFDYLRDN+ + +Q+V
Sbjct: 140 EWMGRVYRFLGLSVGLIAHDMDFPERKLAYASDVTFGTNNEFGFDYLRDNMVIHPQQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+L+DE R PL+ISG K Y V A+ L +G Y ++ K
Sbjct: 200 R---DLHYAIVDEVDSILVDEARTPLIISGPGQKSTDMYAVMARAVAQLKEGEDYKLDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V ++E + E + +L+ EN + AL+AK +RD Y+VR+ + +I
Sbjct: 257 QKTVAPSDEAVLKVERIVGIKNLYAPENLELSHCFTAALRAKALMKRDRDYVVRDDEIII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL GMTGTAK
Sbjct: 317 VDEFTGRLMVGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLGGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PV+ VPTN P RVD P + T R K+ Q VE + + G+P+L+G
Sbjct: 377 TEEDEFLKIYKLPVVVVPTNRPVQRVDEPDAIYKTKRAKYRAVGQAVEEIHKTGQPILIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LS +LKQ G+ HNVLNA KY +EAE + AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEELSAILKQHGVEHNVLNA--KYHEKEAEIIKDAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 QLG 497
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 119/199 (59%), Gaps = 7/199 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGRAGRQGDPG ++F +SL+D++ + F+ D
Sbjct: 497 GDGVQELGGLYILGTERHESRRIDNQLRGRAGRQGDPGRSKFYLSLEDDLLRLFASDNIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + R+ DE+ PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 SI--MDRLGMDENDPIEHKLITRSIERAQKKVEARNFDIRKHVLEYDDVMNQQREVIYAE 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E + IF + +++ + + +P W+LD L+++ A GK+
Sbjct: 615 RRKILRG--EDLKENIFFMLDKIIESEMDQYANAKLYPEEWTLDGLIEDAEKIYAPEGKL 672
Query: 705 LDDLFAGISGDTLLKSIEE 723
+ +S D L +++++
Sbjct: 673 KKEELEAMSRDELEETLKK 691
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 796 VVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDG 855
+E + + M+E+E+ V+++ +D W +HL M+ L +N+R++G RNPL EYKI+
Sbjct: 698 AAREQLFGEENMRELEKVVMLRVVDNHWMEHLDRMDMLREGINLRAYGQRNPLVEYKIEA 757
Query: 856 CRFFISMLSA 865
F +M +A
Sbjct: 758 LDMFEAMEAA 767
>gi|238063017|ref|ZP_04607726.1| preprotein translocase subunit secA [Micromonospora sp. ATCC 39149]
gi|237884828|gb|EEP73656.1| preprotein translocase subunit secA [Micromonospora sp. ATCC 39149]
Length = 971
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 290/442 (65%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+IAEMKT VVTVNDYLAQRDA
Sbjct: 80 RPYDVQVMGGAALHFGNIAEMKTGEGKTLTSVMAVYLNALSGKGVHVVTVNDYLAQRDAA 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH F+GL+VG++ E R+ Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHEFMGLTVGVVLPNRPASEHRAAYECDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FA+VDEVDS+LIDE R PL+ISG A Y A V L G Y +
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPAEHSARWYGEFAGVVARLQPGKDGEGDYEI 256
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ ++ +TE G+A E L ++L++ N P ++ NA+KAKE Y+RD YIV +G+
Sbjct: 257 DYAKRTIAVTERGVAKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELYKRDKDYIVSDGE 316
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTG
Sbjct: 317 VLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKQENQTLATITLQNYFRLYEKLSGMTG 376
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF K++++ V+ +PT+ P +R D + T + K+ +++ + G+PV
Sbjct: 377 TAQTEAGEFNKVYKVGVVTIPTHRPMVREDRADVIYKTEKAKFNAVVEDIAERHQAGQPV 436
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ SVENSE +S LL+++GIPH VLNA K+ AREAE VAQAGRK A+T++TNMAGRG
Sbjct: 437 LVGTVSVENSEIISQLLRRRGIPHAVLNA--KFHAREAEIVAQAGRKGAVTVATNMAGRG 494
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGN + LA + R L
Sbjct: 495 TDILLGGNAEFLAANELRQRGL 516
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E EV GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SLQD
Sbjct: 532 VLPKWKQACDAEAEEVAAAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLQD 591
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F AV + R ED+PIE + RQ+ Q E IRK+++++DE
Sbjct: 592 ELMKRFRAGAVEAV--MERFNIPEDVPIESKMVTRQIKNAQAQIEGQNAEIRKNVLKYDE 649
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
VL QR+ +Y R +L G E S Q+ + VV + G + W L++L
Sbjct: 650 VLNKQRQVIYAERLRVLNG--EDLSDQVRNMIDDVVGAYVVGATSD-GYAEDWDLEQL 704
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+++ER VL++ +D WR+HL M+ L +++R++ R+P+ EY+ +G F +M+ +
Sbjct: 761 RQLERMVLLQVIDRKWREHLYEMDYLQEGISLRAYAQRDPVVEYQREGFDMFATMMDGIK 820
Query: 868 RLTVESL----VQYWSSPMESQELFL 889
TV L VQ + E++E+ L
Sbjct: 821 EETVGFLYNLEVQVQEAEPEAEEVQL 846
>gi|331698930|ref|YP_004335169.1| protein translocase subunit secA [Pseudonocardia dioxanivorans
CB1190]
gi|326953619|gb|AEA27316.1| Protein translocase subunit secA [Pseudonocardia dioxanivorans
CB1190]
Length = 952
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 286/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R + VQ++GG LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 RPYPVQVMGGTALHLGNVAEMRTGEGKTLTCVLPSYLNAISGQGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+HRFLGL+VG+I M P ERR Y D+TY N+E GFDYLRDN+A + LV R
Sbjct: 140 KMGRIHRFLGLTVGVILSEMTPAERREQYAADVTYGTNNEFGFDYLRDNMAWKKDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDE DS+LIDE R PL+ISG A + Y A++A +L + +HY V+ +
Sbjct: 200 G---HNFAIVDEADSILIDEARTPLIISGPAEQSARWYQEFARMAPMLKRDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ +TEEG+ L E L ++L++ N P ++ NA+KAKE +++D YIVR+G +I+
Sbjct: 257 RTIGVTEEGVELVEDQLGIDNLYEAANTPLVGYLNNAIKAKELFKKDKDYIVRDGAVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG+++QA++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRVLAGRRYNEGMHQALEAKEGVEVQAENQTLATITLQNYFRLYEKLSGMTGTAQT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR DL F T K+ +++ + +PVLVG+
Sbjct: 377 EAAELHQIYKLGVVTIPTNRPMIRQDLGDVIFKTEEAKFAAVAEDIAEKYAKRQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL Q +PH VLNA K+ REA VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLSKLLLQLQVPHEVLNA--KHHEREATIVAQAGVPGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLA 406
LGGNP+ +A
Sbjct: 495 LGGNPEFIA 503
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 5/179 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L + E E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 TALAEAEAQVVAEAEEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 586
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++ F+ +++R+ +D+PIE + + + Q E+ F IRK+++++D
Sbjct: 587 DELMRR--FNGQLVETIMNRLNLPDDVPIEAGMVTKAIRSAQTQVEQQNFEIRKNVLKYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
EVL QR +YD R+ +L G E +I + VV + G + W+ ++L
Sbjct: 645 EVLNQQRTVIYDERRRVLNG--EDVRDEIRNMLDDVVTAYVEGETAE-GYAEDWNFERL 700
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER +L++ +D WR+HL M+ L + +R+ R+PL EY+ +G F ML
Sbjct: 760 MRELERQILLQVMDRKWREHLYEMDYLKEGIGLRAMAQRDPLIEYQREGFDMFSRMLEGI 819
Query: 867 RRLTVESLVQ 876
+ TV L Q
Sbjct: 820 KEETVGHLFQ 829
>gi|357389840|ref|YP_004904680.1| putative preprotein translocase SecA subunit [Kitasatospora setae
KM-6054]
gi|311896316|dbj|BAJ28724.1| putative preprotein translocase SecA subunit [Kitasatospora setae
KM-6054]
Length = 925
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 284/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEM+T ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHHGHVAEMRTGEGKTLVGTLPAYLNALTGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ER+ Y DITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHRFLGLEVGVILANMSPAERKRQYAMDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A + Y AK+ + L Y V+ K
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADQATKWYNDFAKLVQRLKIDRDYEVDEKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L++ N P F+ NA+KAKE Y+ D Y+V NG+ +I+
Sbjct: 257 RTVGILEEGVGRVEDYLGIDNLYESVNTPLVGFLNNAIKAKELYKADKDYVVINGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKEG+++Q ++ +A IT Q+ F+LY KLSGMTGT T
Sbjct: 317 DEHTGRILAGRRYNEGMHQAIEAKEGVEVQNENQTLATITLQNFFRLYGKLSGMTGTGTT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN R+D P + + K+ +++ G+PVLVG+
Sbjct: 377 EAAEFHQIYKLGVVPIPTNKTPKRIDQPDLIYKSEPAKFAAVVEDIAERHEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS L+++GIPH VLNA K+ REA+ VAQAGRK A+T++TNMAGRGTDI+
Sbjct: 437 VSVEKSEYLSQELRKRGIPHEVLNA--KHHEREAQIVAQAGRKGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLA 406
LGGN + LA
Sbjct: 495 LGGNSEHLA 503
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 13/185 (7%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ L+ ++ E EV+ +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S
Sbjct: 525 FPEALEKAKLAVKAEQEEVQEIGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLS 584
Query: 573 LQDEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
L D++ + F + V+ + + N ED+PIE + R + Q E+ F IRK+++
Sbjct: 585 LGDDLMRLFK---AGMVERVLSMANVPEDVPIESKMVTRAIASAQTQVEQQNFEIRKNVL 641
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---W 688
++DEVL QR+ +Y R+ +L G E +Q+ +M D+ + V+ + W
Sbjct: 642 KYDEVLNRQREVIYGERRRVLEG--EDLQEQVGHFM----DDTVAAYVNAATGEGFEDDW 695
Query: 689 SLDKL 693
LDKL
Sbjct: 696 DLDKL 700
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T L K + + + A+Y +E + D M+E+ER V++ LD WR+HL M+ L
Sbjct: 728 TPEYLTKAIQEDVAAAYGR--REDQLGDQIMRELERRVVLSVLDRRWREHLYEMDYLQEG 785
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R++ R+PL EY+ +G F +M+ + +V
Sbjct: 786 IALRAYAQRDPLVEYQREGFDLFSAMMEGIKEESV 820
>gi|376289857|ref|YP_005162104.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae C7
(beta)]
gi|372103253|gb|AEX66850.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae C7
(beta)]
Length = 853
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|95930100|ref|ZP_01312839.1| preprotein translocase, SecA subunit [Desulfuromonas acetoxidans
DSM 684]
gi|95133794|gb|EAT15454.1| preprotein translocase, SecA subunit [Desulfuromonas acetoxidans
DSM 684]
Length = 894
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/453 (47%), Positives = 294/453 (64%), Gaps = 49/453 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT V+TVNDYLA+RD+
Sbjct: 81 MRHFDVQMIGGMVLHSGKIAEMKTGEGKTLVATLPTYLNALTGKGVHVITVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +VHRFLGL+VG I G+ EER+ Y D+TY N+E GFDYLRDN+ Q V
Sbjct: 141 DWMGQVHRFLGLTVGCIIHGITDEERKEAYASDVTYGTNNEFGFDYLRDNMKFELSQYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISG--EASKDVARYPVAAKVAEL---------- 145
R +FAIVDEVDS+LIDE R PL+ISG EAS ++ Y V A + L
Sbjct: 201 R---DLNFAIVDEVDSILIDEARTPLIISGPSEASSELY-YRVNAIIPRLKKGEVIEHRD 256
Query: 146 --LVQGLH-----YTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKA 197
+ Q L YTV+ K + LTE+G+A E L ++L+D V ALKA
Sbjct: 257 GKIGQTLKEFTGDYTVDEKAKAASLTEDGVASVEKMLGVDNLYDPRHIELLHHVNQALKA 316
Query: 198 KEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQIT 257
++ +V Y+V++G+ +I++E TGR+ RRWS+G+HQAVEAKEG+KI++++ +A IT
Sbjct: 317 HALFKNEVDYVVKDGEVMIVDEFTGRLMPGRRWSDGLHQAVEAKEGVKIESENQTLATIT 376
Query: 258 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWE 317
+Q+ F++Y KL+GMTGTA TE EF +++++ V+ +PTN PN R D + T + K+
Sbjct: 377 FQNYFRMYDKLAGMTGTADTEAAEFNEIYKLSVVVIPTNRPNQRTDYADMIYKTEQEKFN 436
Query: 318 YARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQA 377
+++ + + G+PVLVG+ S+ENSE L+ LK+ G+PH+VLNA K+ +EAE VAQA
Sbjct: 437 AVIEDIRACHKSGQPVLVGTISIENSERLAAQLKKSGVPHHVLNA--KHHEKEAEIVAQA 494
Query: 378 GRKYAITISTNMAGRGTDIILGGNPKMLAKKII 410
GR ++TI+TNMAGRGTDI+LGGNP MLAK ++
Sbjct: 495 GRLGSVTIATNMAGRGTDIVLGGNPDMLAKDVV 527
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 177/373 (47%), Gaps = 76/373 (20%)
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
G T Y +L+ V C+ E +V GGL+++GT HESRRIDNQLRGR+GRQGDPG
Sbjct: 529 GDTEDERYAELLEKFTVECAEEKQKVLEAGGLYILGTERHESRRIDNQLRGRSGRQGDPG 588
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
++RF +SL+D++ + F + ++ ++ E+ PIE I R + Q E + F
Sbjct: 589 ASRFYLSLEDDLLRIFG--SHRVAFIMDKLKIPENEPIEHGMISRAIENAQKKVEGHNFD 646
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI---IFGNVDPL 682
IRK L+E+D+V+ QR+ +YD R+ +L G N I A+++E+ I P
Sbjct: 647 IRKHLIEYDDVMNRQREVIYDQRREVLAGEN------IRGTYNAIIEEMVEDIVATFCPE 700
Query: 683 K-HPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLP 741
K P W++ L+ +FI+ PE+ PDL
Sbjct: 701 KVSPEDWNVSSLVDDFIS--------------------QFNFPPEM----------PDLE 730
Query: 742 KPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESR 801
PN +++LT++ + + L+ K E
Sbjct: 731 SKPN-------------------TEELTESLKKQVFKRLIDK---------------EEE 756
Query: 802 YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFIS 861
+ ++ + +L++ +D W+DHL++++ L + +R +G +NP EEYK + F+
Sbjct: 757 FTPAVLEHLMTVLLLQVIDSQWKDHLLSIDHLKEGIGLRGYGQKNPKEEYKREAYNLFME 816
Query: 862 MLSATRRLTVESL 874
M+ R+ ++ L
Sbjct: 817 MMGRIRQEVLQKL 829
>gi|376287186|ref|YP_005159752.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
BH8]
gi|371584520|gb|AEX48185.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
BH8]
Length = 853
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYNLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 KVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGESGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G + M+ +ER V++ +D W
Sbjct: 749 LEENVTAIG------------------------------GEAQMRNIERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|376247970|ref|YP_005139914.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC04]
gi|372114538|gb|AEX80596.1| preprotein translocase subunit SecA [Corynebacterium diphtheriae
HC04]
Length = 853
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL+VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLNVGVILANMQPAERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVEGSSQWYSVFAQIVPRMTRDIHYEVDNRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 RTVGVREEGVAFVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRPNQREDMTDLVYKTQEAKFAAVVDDISERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI H+VLNA K+ +EA+ VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGIKHSVLNA--KFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + +R L
Sbjct: 495 LGGNADIIADINLRERGL 512
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 164/351 (46%), Gaps = 69/351 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F T
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDDLMVRFVGQT--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFEMRKNVLKYDEVMNEQRKVIYTERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILD 706
IL A+ I +Q ++D+ I VD Y W L+ L ++ G
Sbjct: 660 EILESAD------IAADIQKMIDDTIGAYVDAATATGYVEDWDLETLWNALESLYGPS-- 711
Query: 707 DLFAG---ISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
F+ I GD S E EL++ D+ D K A
Sbjct: 712 --FSAQELIDGD----SYGEPGELSASDLRKAVLEDAHKQ-----------------YAE 748
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+++T G N+ ER V++ +D W
Sbjct: 749 LEENVTAIGGEAQMRNI------------------------------ERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDAVKEETVRQL 829
>gi|226314894|ref|YP_002774790.1| preprotein translocase SecA subunit [Brevibacillus brevis NBRC
100599]
gi|254767903|sp|C0Z6T7.1|SECA_BREBN RecName: Full=Protein translocase subunit SecA
gi|226097844|dbj|BAH46286.1| preprotein translocase SecA subunit [Brevibacillus brevis NBRC
100599]
Length = 839
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 285/427 (66%), Gaps = 37/427 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL +G I+EMKT VVTVN+YLA+RD+
Sbjct: 80 MRHFDVQMIGGMVLQEGRISEMKTGEGKTLVATLATYLNALMGKGVHVVTVNEYLAERDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++ FLGL+VGL + G+ PEE+R Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 SIMGKLYNFLGLTVGLNKNGLNPEEKREAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P FAI+DEVDS+LIDE R PL+ISG A+K Y + + + L + +T++ K
Sbjct: 200 R---PLFFAIIDEVDSILIDEARTPLIISGSANKSTELYYICSHFVKRLEEEKDFTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-----ALKAKEFYRRDVQYIVRNG 212
V LT++G++ E A ++L+D A +N ALKA+ ++RDV Y+V+ G
Sbjct: 257 LKIVNLTDDGVSKVEQAFNIDNLYD----TAHITLNHHITAALKAQVLFKRDVDYVVQEG 312
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ +I++E TGR+ RR+S+G+HQA+EAKEGL++Q++S+ +A IT Q+ F++Y KL+GMT
Sbjct: 313 EVVIVDEFTGRLMVGRRYSDGLHQAIEAKEGLRVQSESMTLATITLQNYFRMYEKLAGMT 372
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTAKTEE+EF K++ + V+ +PTN P RVD P F T K+ ++ + G+P
Sbjct: 373 GTAKTEEEEFKKIYGLDVVVIPTNKPVQRVDSPDLVFKTEAAKYRAVVNDIVERHKKGQP 432
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
+LVG+ S+ENSE LS +LKQ+G+PHNVLNA K REAE VA+AG A+TI+TNMAGR
Sbjct: 433 ILVGTISIENSERLSQMLKQKGVPHNVLNA--KQHEREAEIVARAGVYGAVTIATNMAGR 490
Query: 393 GTDIILG 399
GTDI LG
Sbjct: 491 GTDIQLG 497
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 4/166 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S+QDE+ ++F D
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSMQDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +EDMPIE + R + Q E F RK ++++D+V+ QR VY
Sbjct: 555 IMNMMDRLGMEEDMPIESRLVTRAVESAQKRVEGSNFDARKGVLQYDDVMNQQRLVVYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ IL +E+ S + AV++ + + + P W L L
Sbjct: 615 RKDILE--HENLSDVALNMIYAVMERAVSLHCPKEEVPEDWDLQAL 658
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E E+ V+++ +D W DH+ M++L +++R++ +PL EY+ +G + ML+A
Sbjct: 708 IREFEKVVILRAVDSKWMDHIDAMDQLRQGIHLRAYAQNDPLREYQFEGYEMYQGMLAAV 767
Query: 867 RRLTVESLVQYWSSPMESQEL 887
+ E + Y SQ L
Sbjct: 768 Q----EEVAMYIMKAEVSQNL 784
>gi|409358726|ref|ZP_11237085.1| preprotein translocase subunit SecA [Dietzia alimentaria 72]
Length = 925
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 286/436 (65%), Gaps = 29/436 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQIIG VLH G++AEMKT VVTVNDYLA+RDAEWM
Sbjct: 82 YTVQIIGAIVLHTGAVAEMKTGEGKTLTCVLPAYLNALSGNGVHVVTVNDYLAKRDAEWM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
RVHRFLGLSVG I GM P +RR Y DITY N+E GFDYLRDN+A ++ +LV R
Sbjct: 142 GRVHRFLGLSVGSILSGMTPAQRREAYHSDITYGTNNEFGFDYLRDNMAHDTAELVQRG- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
+FAIVDEVDS+LIDE R PL+ISG A Y A++A LL +G HY V+ K +
Sbjct: 201 --HNFAIVDEVDSILIDEARTPLIISGPADGSSKWYGEFARMAPLLEEGTHYEVDRKKRT 258
Query: 161 VELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ +TE G+ E L ++L++ N P ++ N++KAKE + D YIVR+G +I++E
Sbjct: 259 IGVTELGVEFVEDQLGIDNLYEAANSPLVSYLNNSIKAKELFTADKDYIVRDGDVIIVDE 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGRV + RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+TE
Sbjct: 319 FTGRVLDGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNFFRLYEKLSGMTGTAETEA 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
E ++++ V+ +PTN P R D + T K+ ++ +PVLVG+ S
Sbjct: 379 AELYSIYKLEVMPIPTNRPMARQDQADLIYKTEEAKFAAVVDDIAERVDKKQPVLVGTAS 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE+LS LL ++G+ H+VLNA K+ A EA+ VAQAGR ++T++TNMAGRGTDI+LG
Sbjct: 439 VERSEHLSKLLTRKGVKHHVLNA--KFHASEAQIVAQAGRPGSVTVATNMAGRGTDIVLG 496
Query: 400 GNPKMLAKKIIEDRLL 415
GN ++A + +R L
Sbjct: 497 GNADIIADLNLRERGL 512
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E V+ GGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 536 TKQEAESVRDAGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ ++R+ +D+PIE + R + Q E F IRK ++++DEV+ QR
Sbjct: 596 AAVEAI--MNRLNLPDDVPIEAGMVSRAVKNAQTQVESQNFEIRKDVLKYDEVMNQQRTV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E + Q+ + VV + G + W L+KL L++ +
Sbjct: 654 IYGERKRILEG--EDITDQVESMIYQVVSAYVEGAT-AEGYVEDWDLEKLWDALRQLYPV 710
Query: 701 ---AGKILDDLFAGISGDTLLKSIEE 723
A ++D G +GD K++++
Sbjct: 711 SIDAQDVIDGDEYGSTGDLSAKNLKD 736
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD-----------VYMKE 809
++I + D+ Y +T +L K L D ++ +RYD+ M++
Sbjct: 710 VSIDAQDVIDGDEYGSTGDLSAKNLKDAVLDDVF-----ARYDEREAEIEGVGGEGAMRQ 764
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ER+++++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +M+ R
Sbjct: 765 LERSIMLQVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFSAMMDGVREE 824
Query: 870 TVESL--VQYWSSPME 883
TV L V+ ++P +
Sbjct: 825 TVAFLFNVKVEATPQQ 840
>gi|359419955|ref|ZP_09211899.1| protein translocase subunit SecA [Gordonia araii NBRC 100433]
gi|358244059|dbj|GAB09968.1| protein translocase subunit SecA [Gordonia araii NBRC 100433]
Length = 932
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/429 (48%), Positives = 288/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G+IAEMKT VVTVNDYLA+RDAE
Sbjct: 78 KHFHVQIMGGAALHFGNIAEMKTGEGKTLTCVLPAYLNALAGKGVHVVTVNDYLAKRDAE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I M E R+ Y DITY N+E GFDYLRDN+A + +Q V R
Sbjct: 138 WMGRVHRFLGLETDVILSAMSSEARKEAYDADITYGTNNEFGFDYLRDNMAHSLDQQVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V++K
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADSSSKWYVEFARLAPLMKKDVHYEVDIKK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ L E L ++L+D N ++ NA+K KE + RD YIVRNG+ +I+
Sbjct: 255 KTVGVHEEGVNLVEDQLGIDNLYDAANSQLVGYLNNAIKVKELFHRDKDYIVRNGEVVIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV + RR++EG+HQA+EAKEG++IQA++ +A IT Q+ F++Y KL+GMTGTA+T
Sbjct: 315 DEFTGRVLDGRRFNEGLHQAIEAKEGVEIQAENQTLATITLQNYFRMYDKLAGMTGTAET 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN P IR D + T K++ ++ G+PVL+G+
Sbjct: 375 EAAEFDQIYKLGVLPIPTNKPMIRKDQTDLIYKTEEAKFDAVVDDIAERHEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS L+++ +PH+VLNA K+ +EA+ +A+AGR A+T++TNMAGRGTD++
Sbjct: 435 TSVERSEYLSRQLQRRNVPHSVLNA--KFHEQEAQIIAEAGRVGAVTVATNMAGRGTDVV 492
Query: 398 LGGNPKMLA 406
LGGN ++A
Sbjct: 493 LGGNADIIA 501
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 533 NAEAEADEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFN 592
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ +++R+ +D+PIE + + + Q E+ F +RK+++++DEV+ QRK
Sbjct: 593 --GAALETIMNRVNLPDDVPIEAKMVTKAIRSAQTQVEQQNFEVRKNVLKYDEVMNEQRK 650
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R +IL G E S+Q+ Q+ +D+++ VD Y W +D+L
Sbjct: 651 VIYRERTTILAG--EDHSEQVQQF----IDDVVGAYVDGATAEGYAEDWDVDEL 698
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER++L+ +D WRDHL M+ L + +RS +P+ EY+ +G F ML
Sbjct: 760 MRQLERSILLSVIDRKWRDHLYEMDYLREGIYLRSMAQADPVVEYQREGFDMFHGMLEGI 819
Query: 867 RRLTV 871
+ T+
Sbjct: 820 KEETL 824
>gi|419842100|ref|ZP_14365457.1| preprotein translocase, SecA subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|386903220|gb|EIJ68039.1| preprotein translocase, SecA subunit [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 889
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 293/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G I EMKT V+TVNDYLA RD
Sbjct: 81 LRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATAPVYLNALSGRGVHVITVNDYLATRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+ FLGL+ G+I GM ++RR+ Y+CDITY NSE GFDYLRDN+ A+ + V
Sbjct: 141 EMMGRVYSFLGLTSGVIVNGMYGKDRRAAYQCDITYGTNSEFGFDYLRDNMVASVGEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++ IVDEVDS+LIDE R PL+ISG +S + Y VA +V LL +
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGASSDTIKWYQVAYQVVSLLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K ++ LTE+G++ E L+ ++L+ EN ++ A
Sbjct: 258 IKEKKEMNIPDEKWGDYEVDEKAKNIVLTEKGVSKVEKLLKLDNLYSPENVEITHYINQA 317
Query: 195 LKAKEFYRRDVQYIVRN-GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR+ G+ +II+E TGR E RR+S+G+HQA+EAKE ++I ++ +
Sbjct: 318 LKAKELFKRDRDYLVRDTGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEDVRIAGENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTN P IR D + T
Sbjct: 378 ATITLQNYFRMYQKLSGMTGTAETEATEFVHTYGLEVVVIPTNEPVIRKDHSDLVYKTKE 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K E ++E +++ G+PVLVG+ S+++SE LSDL+ ++GIPHNVLNA KY A+EAE
Sbjct: 438 EKLEAIIAKIEELYKKGQPVLVGTVSIQSSEELSDLIHKKGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGRK ++TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 VAQAGRKNSVTIATNMAGRGTDIMLGGNPEFLA 528
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 73/389 (18%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A++ LG A YL V C E EV LGGL+++GT HESRRIDNQLRGR+GR
Sbjct: 528 AIHELGSREAENYLEVFAKYVKQCEEERKEVLSLGGLYILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG ++F +SL+D++ + F D AV + ++ PI I + + Q E
Sbjct: 588 QGDPGESQFFLSLEDDLMRLFGSDRVKAV--MEKLGLPHGEPITHSMINKAIENAQTKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ Q R +I NE A+V E + N+
Sbjct: 646 SRNFGIRKNLLEFDDVMNKQ-------RTAIYASRNE-----------ALVKEDLKENIL 687
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ H ++ K F + G++ +D DI
Sbjct: 688 SMLHDVIYT-----KTFQFLQGEVKEDW----------------------DIQ------- 713
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNL--LRKYLGDILIASYLNVVQ 798
+L ++LA D + ++ + N+ L D L ++Y +
Sbjct: 714 ---------------ALAKYLAERFDYVIEDEKEYMAMNVEDYAALLYDRLASAYEE--K 756
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
E+R M+++E+ +L + +D WR+HL ++ L + +R++G +NP+ EYK+
Sbjct: 757 ENRIGSEVMRKIEKYILFEVVDARWREHLKALDGLREGIYLRAYGQKNPVTEYKLISSEI 816
Query: 859 FISMLSATRRLTVESLVQYWSSPMESQEL 887
+ ML + L + ES+ L
Sbjct: 817 YEKMLETIQEEITSFLFKIVIKTEESERL 845
>gi|374850547|dbj|BAL53533.1| preprotein translocase subunit SecA [uncultured gamma
proteobacterium]
Length = 910
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/438 (50%), Positives = 284/438 (64%), Gaps = 42/438 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAAYLNALPGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I G+ +ER+ Y DITY N+ELGFDYLRDN+A + E V
Sbjct: 141 QWMGKLYNFLGLSVGVIVSGLSQKERKQAYAADITYATNNELGFDYLRDNMAFSKEDQVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLH----- 151
R +AIVDEVDS+LIDE R PL+ISG + Y + A V L Q
Sbjct: 201 RG---HAYAIVDEVDSILIDEARTPLIISGPTEERTDLYLKMNALVPHLKRQEGEGEDGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMAL-------ETNDLWDE-NDPWARFVMNALKAKEFYRR 203
YTV+ K V LTE G E L L+D N ++ AL+A Y R
Sbjct: 258 YTVDEKTKQVFLTERGHEKVEQLLVQAGLIHSGQSLYDAANIRLLHYLNAALRAHTLYHR 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
DV YIVRNG+ +I++E TGR+ RRWSEG+HQA+EAKEG+ IQ ++ +A IT+Q+ F+
Sbjct: 318 DVDYIVRNGEVIIVDEFTGRIMPGRRWSEGLHQAIEAKEGVPIQQENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KL+GMTGTA TE EF +++ + V+ +PT+ P IR DLP + TAR K+E +++
Sbjct: 378 LYEKLAGMTGTADTEAFEFHQIYGLEVVVIPTHKPMIRKDLPDVVYLTAREKYEAIVKDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
E + +PVLVG+TS+ENSEYLS LLK++GIPH VLNA K+ REA+ +AQAGR A+
Sbjct: 438 EECRKRQQPVLVGTTSIENSEYLSGLLKRKGIPHQVLNA--KHHEREAQIIAQAGRPGAV 495
Query: 384 TISTNMAGRGTDIILGGN 401
TI+TNMAGRGTDI+LGGN
Sbjct: 496 TIATNMAGRGTDIVLGGN 513
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 65/333 (19%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V + GGLHVIG+ HESRRIDNQLRGR+GRQGDPGS+RF +SLQD + + F+ D A
Sbjct: 544 VVQAGGLHVIGSERHESRRIDNQLRGRSGRQGDPGSSRFYLSLQDNLLRIFASDRVAA-- 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
L+ ++ E IE + R + Q E + F IRK+L+E+D V QR+ +Y+LR
Sbjct: 602 LMQKLGMQEGEAIEHPWVTRAIENAQRKVEAHNFDIRKTLLEYDNVANDQRRVIYELRNE 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFA 710
+L A + S + Q V+ E++ ++ P W ++ L + A G L+
Sbjct: 662 LL--AADDVSATLDSIRQDVLAELVDKHLPPDTFEEQWDVEGLERALEAEFG-----LYF 714
Query: 711 GISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTK 770
++ K ++E PEL D LKR + ++ +
Sbjct: 715 PVA-----KRLQEDPELQIAD-------------------------LKREILEAAERAYR 744
Query: 771 NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
+ +LR++ E++VL++ LD W++HL M
Sbjct: 745 EKERQIGPEILRQF--------------------------EKSVLLQVLDNAWKEHLAAM 778
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+ L +++R + R+P +EYK + F SML
Sbjct: 779 DHLRQGIHLRGYAQRDPKQEYKREAFLMFQSML 811
>gi|160931378|ref|ZP_02078776.1| hypothetical protein CLOLEP_00213 [Clostridium leptum DSM 753]
gi|156869625|gb|EDO62997.1| preprotein translocase, SecA subunit [Clostridium leptum DSM 753]
Length = 965
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 291/448 (64%), Gaps = 46/448 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQIIGG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MRHFPVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLHGLTGEGVHIVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGLSVGLI + +ER+ Y DITY N+ELGFDYLRDN+ E V
Sbjct: 139 EWMGKLYRFLGLSVGLIVHDLDNKERKKAYDADITYGTNNELGFDYLRDNMVTYKENKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA---------AKVAEL--- 145
R FAIVDEVDS+LIDE R PL+ISG+ K Y +A +VAEL
Sbjct: 199 R---EHVFAIVDEVDSILIDEARTPLIISGQGDKSTELYTLADRFARTLKETRVAELNEK 255
Query: 146 -----LVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKE 199
L + Y V+ K + LT G+ AE ++L D ++ + +N A+KA
Sbjct: 256 EDNDELYKDADYIVDEKAKTATLTPSGVKKAEAYFNIDNLTDADNITIQHHINQAIKAHG 315
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
+RD++Y+V++G+ +I++E TGR+ RR++EG+HQA+EAKEG+ + +S +A IT+Q
Sbjct: 316 VMKRDIEYVVKDGEVIIVDEFTGRLMYGRRYNEGLHQAIEAKEGVTVARESKTLATITFQ 375
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F+LY +LSGMTGTA TEE+EF +++++ V+E+PTN P IR DLP F T +GK+E
Sbjct: 376 NYFRLYKRLSGMTGTAMTEEEEFREIYKLDVVEIPTNRPMIRKDLPDSIFRTEKGKFEAV 435
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
+++ G+PVLVG+ S+E SE LS +LK++GI H VLNA KY +EAE VAQAG+
Sbjct: 436 IEDIIQCHEKGQPVLVGTISIEKSELLSKMLKRRGIKHEVLNA--KYHDKEAEIVAQAGK 493
Query: 380 KYAITISTNMAGRGTDIILGGNPKMLAK 407
K A+TI+TNMAGRGTDI+LGGN + +AK
Sbjct: 494 KGAVTIATNMAGRGTDIMLGGNAEYMAK 521
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
T+ + K + +E EV+ GGL ++GT HESRRIDNQLRGR+GRQGDPG++RF +
Sbjct: 554 TFQELNKKYKDAIKSEAEEVREAGGLFIMGTERHESRRIDNQLRGRSGRQGDPGTSRFYL 613
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
S++D++ + F D A+ + R+ +E++PIE + + Q E FGIRK+++
Sbjct: 614 SVEDDLMRLFGGDRMKAI--MDRLNVEENVPIENKVLSNSIESAQRKVESRNFGIRKNVL 671
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY-WSL 690
++D+V+ QR+ +Y R +L G + +QI + ++ V+ + + P + P+ W+L
Sbjct: 672 QYDDVMNRQREIIYAQRNEVLDGKD--LKEQILKMLRQAVESRVKTYL-PAETPKEDWNL 728
Query: 691 DKL 693
+ L
Sbjct: 729 EGL 731
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+K +D W DH+ M L + +R++ +P+ EY+++G F M++A
Sbjct: 784 MRELERVVLLKNVDTKWMDHIDAMEELKRGIRLRAYAQHDPVVEYRLEGFDMFDEMIAAI 843
Query: 867 RRLTVESLV 875
R T ++
Sbjct: 844 REDTARMML 852
>gi|304317583|ref|YP_003852728.1| preprotein translocasesubunit SecA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779085|gb|ADL69644.1| preprotein translocase, SecA subunit [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 895
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 282/432 (65%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLG+SVG+I M EER+ Y DITY N+E GFDYLRDN+ E++V
Sbjct: 140 DWMGKIYEFLGMSVGVILHDMDSEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L YT++ K
Sbjct: 200 RH---LNYAIVDEVDSILIDEARTPLIISGVGEKSTDLYKRADTFVRTLKNEEDYTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE +L D EN + + ALKA +RD Y+V++G+ +I
Sbjct: 257 ARAVSLTEKGIEKAERFFNLANLADLENIEISHNINQALKAHAIMKRDKDYVVKDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KLSGMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYDKLSGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN IR+D P + T K++ ++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKEMIRIDHPDVIYKTEEAKFKAVVDDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE LS++LK+ GI H VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TITIEKSEKLSNMLKKLGIKHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LAKK
Sbjct: 495 ILGGNPEFLAKK 506
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 106/168 (63%), Gaps = 12/168 (7%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V +LGGL++IGT HESRRIDNQLRGRAGRQGDPG +RF +SL+D++ + F + +
Sbjct: 557 VVKLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGESRFYISLEDDLMRLFG--SERIKN 614
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+++ + ++D PIE + +Q+ Q E F +RK+++E+D+V+ QR+ +Y R+
Sbjct: 615 MMNSLGIEDDQPIEHKILTKQIEQAQKKVEGINFDVRKNVLEYDDVMNKQREIIYKERRK 674
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPL----KHPRYWSLDKLL 694
+L G + + QY+ +V +II NV+ K+P W +D LL
Sbjct: 675 VLEG------EDLRQYILDMVKDIIKRNVEIYTAGSKYPEEWDIDGLL 716
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+K +D W DH+ M++L + +R++G +P+ EYK G F ++++
Sbjct: 766 MREIERVVLLKVVDTRWMDHIDEMDQLRQGIGLRAYGQVDPVIEYKKIGFDMFEDLVNSI 825
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 826 QEDTVKFL 833
>gi|357058419|ref|ZP_09119273.1| preprotein translocase [Selenomonas infelix ATCC 43532]
gi|355374272|gb|EHG21573.1| preprotein translocase [Selenomonas infelix ATCC 43532]
Length = 881
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 279/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T VVTVNDYLA+RD+
Sbjct: 83 MRHFDVQMIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALEGKGVHVVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSEAQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 203 R---PLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VRN + +I
Sbjct: 260 QKTVAPADSAVPKIEKIVGITNLYAPENIELSHCFTAALRAKALMHRDRDYVVRNDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++ +PVI +PTN P R+D P + T K+ + V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYNLPVIVIPTNKPVQRIDEPDVIYKTKAAKYRAVGRAVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSNVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEALGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDRLGMEEDEPIEHAIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A AG++
Sbjct: 618 RRKILKG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPAGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
++ D + + +E++ E
Sbjct: 676 KKAELEALARDEIQEELEKVAE 697
>gi|345861349|ref|ZP_08813615.1| preprotein translocase, SecA subunit [Desulfosporosinus sp. OT]
gi|344325614|gb|EGW37126.1| preprotein translocase, SecA subunit [Desulfosporosinus sp. OT]
Length = 830
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 284/422 (67%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T VVTVNDYLA+RD+E
Sbjct: 73 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGQGVHVVTVNDYLARRDSE 132
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++H+FLGLSVGLI G+ E+RRS+Y DITY N+E GFDYLRDN+ E LV R
Sbjct: 133 WMGKIHQFLGLSVGLIVHGLNYEQRRSSYAADITYGTNNEFGFDYLRDNMVTRPEALVQR 192
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+L+DE R PL+ISGEA K Y A + L Y V K
Sbjct: 193 I---LNYAIVDEVDSILVDEARTPLIISGEADKPTELYFRVAMIIPRLKPEDDYKVIEKE 249
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L ++L+++ + A V ALKA+ ++RD Y+V++G+ +I+
Sbjct: 250 RIVTLTEQGVSRVESMLGVDNLYEDIHTELAHHVNQALKAQTLFKRDRDYVVKDGEVIIV 309
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A +T+Q+ F++Y KLSGMTGTA T
Sbjct: 310 DEFTGRMMFGRRYSEGLHQAIEAKEGVKIEKESQTLATVTFQNYFRMYNKLSGMTGTAMT 369
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN P IR D + T GK+ + V G+P+LVG+
Sbjct: 370 EEPEFRKIYKLDVVEIPTNKPAIRKDSSDVIYRTEEGKFLSVVESVIERHAQGQPLLVGT 429
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE+LS+LL ++GIPH VLNA K+ +EAE V+QAG++ +TI+TNMAGRGTDII
Sbjct: 430 VSVEKSEHLSNLLGRRGIPHQVLNA--KFHEKEAEIVSQAGQRGMVTIATNMAGRGTDII 487
Query: 398 LG 399
LG
Sbjct: 488 LG 489
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 67/338 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL+D++ + F +
Sbjct: 489 GEGVADLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFFISLEDDLMRMFGAENIM 548
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ D+ MPI I R + Q E F IR KHV D
Sbjct: 549 GI--MDKLGMDDSMPITSKMISRSIETAQRRVENRNFDIR--------------KHVLDY 592
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
+ Q + + A ++ G + L + + K ++D
Sbjct: 593 ---------DDVMNQQREVIYAQRRAVLMG-------------ENLRDNIMDMLAKAVND 630
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+ SG++ +L L I +F+ P + P LA D
Sbjct: 631 SISMFSGESPFPEEWDLTGLADY-IESFFLPGIHLNPE--------------ELA----D 671
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L+K LL + A L +E ++ M+EVERAV+++ +D W DHL
Sbjct: 672 LSKE---EIEEKLLDQ-------AKALYESREEQFGSELMREVERAVMLQVVDSKWMDHL 721
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+ L + +R++G ++PL EY+ +G F +M+ +
Sbjct: 722 DAMDMLREGIGLRAYGQKDPLVEYRREGFEMFQAMIDS 759
>gi|325067657|ref|ZP_08126330.1| preprotein translocase, SecA subunit [Actinomyces oris K20]
Length = 944
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/433 (50%), Positives = 281/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 80 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 140 DLMGRVHRFLGLTTGCILVGQTPAERREQYACDITYGTNNEFGFDYLRDNMAQRPEDLVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG AS DV + Y A ++E L G Y V+
Sbjct: 200 RG---HAFVIVDEVDSILIDEARTPLIISGPASGDVNKWYKEFATISERLRAGKDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 257 KKRTVGVLSAGIERVEDYLGVDNLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 317 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 376
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + T K + ++ LG+PV
Sbjct: 377 TAETEAAEFAGTYKIGVVPIPTNKPMIRQDQPDLVYTTVEAKLDAVVDDIAERHELGQPV 436
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L++QGIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 437 LVGTTSVEKSEILSERLREQGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 494
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 495 TDIMLGGNAEHIA 507
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 171/353 (48%), Gaps = 57/353 (16%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + F+
Sbjct: 540 CRAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMRMFA- 598
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ A ++S +D+P+E + R + G Q E + IRK+++++D+V+ QR+
Sbjct: 599 -SGLAQRIMSSGAYPDDVPLESKMVTRGIAGAQRQVESRNYEIRKNVLKYDDVMTEQREK 657
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF--IAIA 701
VY R+ +L G + ++F+ QAV I G + P W LD L E +
Sbjct: 658 VYSERRRVLDGEDLEPQIEVFRN-QAVTSIIEAGTAE--GRPDEWDLDALWGELGRLYPV 714
Query: 702 GKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL 761
G D++ + G L S E L E S DI Y
Sbjct: 715 GLTQDEIVEALGGKDALTS-ERLIEEFSEDIAVAY------------------------- 748
Query: 762 AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDC 821
++ R N L +++ + +E M+ +ER +L+ +D
Sbjct: 749 --------EDAEARIEANAL----------AHVQLGEEP------MRTLERRILLAVVDK 784
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
WR+HL M+ L + +R+ R+PL EY +G R F +M+ R TVE +
Sbjct: 785 RWREHLYEMDYLKEGIGLRAMAQRDPLVEYANEGARMFRAMMEGIREETVEQI 837
>gi|421874833|ref|ZP_16306433.1| preprotein translocase, SecA subunit [Brevibacillus laterosporus
GI-9]
gi|372456177|emb|CCF15982.1| preprotein translocase, SecA subunit [Brevibacillus laterosporus
GI-9]
Length = 824
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/435 (46%), Positives = 290/435 (66%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL +G IAEMKT +VTVN+YLA+RD+
Sbjct: 80 MRHFDVQLIGGMVLQEGRIAEMKTGEGKTLVATLATYLNALAGKGVHIVTVNEYLAERDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++FLG++VGL GM E++R Y CDITY N+E GFDYLRDN+ EQ+
Sbjct: 140 KIMGELYQFLGMTVGLNINGMSAEQKREAYNCDITYGTNNEFGFDYLRDNMVLYKEQMTQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AI+DEVDS+L+DE R PL+ISG A+K Y + + + L ++++ K
Sbjct: 200 R---PLHYAIIDEVDSILVDEARTPLIISGSANKSTELYYICSHFVKRLEPETDFSIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
LT+EG++ E A ++L+D N + +ALKA+ ++RDV Y+V++G+ +I
Sbjct: 257 LKIATLTDEGVSKVEKAFNVDNLYDTNHVTLNHHITSALKAQVLFKRDVDYVVQDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK+Q++S+ +A IT Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMVGRRYSDGLHQAIEAKEGLKVQSESMTLATITLQNYFRMYQKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P R+D+ + + K+ +E+ + G+P+LVG
Sbjct: 377 TEEEEFKKIYGLDVVVIPTNRPIQRIDMADAIYKSEDAKYRAVVKEIVERHKKGQPILVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS LL+Q+G+PHNVLNA K REAE VA+AG+ A+TI+TNMAGRGTDI
Sbjct: 437 TISIENSEKLSHLLRQKGVPHNVLNA--KQHEREAEIVARAGQFGAVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKMLAKKII 410
LG G P + II
Sbjct: 495 QLGEGVPAIGGLHII 509
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 161/338 (47%), Gaps = 68/338 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SLQDE+ ++F D
Sbjct: 497 GEGVPAIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLQDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +EDMPIE + R + Q E F RK ++++D+V+ QR+ +Y
Sbjct: 555 IMNMMDRLGMEEDMPIESRLVSRAVESAQKRVEGSNFDARKVVLQYDDVMNKQREVIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL N + + +V++ I+ + P W L+ LL+ ++
Sbjct: 615 RKEILERDN--LHDIVEGMINSVIERIVQAYCPKEQIPEEWDLEGLLETCVS-------- 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F F D NL +G +++ ++ L +
Sbjct: 665 --------------------------TFLFEDAITVSNL-KG--KEAEEIEEMLKEIAHK 695
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
K ++ +GD ++A + VV V RAV D W DH+
Sbjct: 696 QLKQ---------RQEEIGD-MMAEFEKVV------------VLRAV-----DSKWMDHI 728
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M +L +++R++ +PL EY+ +G F M+++
Sbjct: 729 DAMEQLRQGIHLRAYAQTDPLREYQFEGYEMFQGMIAS 766
>gi|433655805|ref|YP_007299513.1| preprotein translocase, SecA subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293994|gb|AGB19816.1| preprotein translocase, SecA subunit [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 894
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 282/432 (65%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLG+SVG+I M EER+ Y DITY N+E GFDYLRDN+ E++V
Sbjct: 140 DWMGKIYEFLGMSVGVILHDMDSEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L YT++ K
Sbjct: 200 RH---LNYAIVDEVDSILIDEARTPLIISGVGEKSTDLYKRADTFVRTLKNEEDYTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE +L D EN + + ALKA +RD Y+V++G+ +I
Sbjct: 257 ARAVSLTEKGVEKAERFFNLANLADLENIEISHNINQALKAHAIMKRDKDYVVKDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KLSGMTGTA+
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYDKLSGMTGTAQ 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN IR+D P + T K++ ++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKEMIRIDHPDVIYKTEEAKFKAVVDDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE LS++LK+ GI H VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TITIEKSEKLSNMLKKLGIKHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LAKK
Sbjct: 495 ILGGNPEFLAKK 506
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 106/168 (63%), Gaps = 12/168 (7%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V +LGGL++IGT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + F + +
Sbjct: 557 VVKLGGLYIIGTERHESRRIDNQLRGRSGRQGDPGESRFYISLEDDLMRLFG--SERIKN 614
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+++ + ++D PIE + +Q+ Q E F +RK+++E+D+V+ QR+ +Y R+
Sbjct: 615 MMNSLGIEDDQPIEHKILTKQIEQAQKKVEGINFDVRKNVLEYDDVMNKQREIIYKERRK 674
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPL----KHPRYWSLDKLL 694
+L G + + QY+ +V +II NV+ K+P W +D LL
Sbjct: 675 VLEG------EDLRQYILDMVKDIINRNVEIYTAGSKYPEEWDIDGLL 716
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+K +D W DH+ M++L + +R++G +P+ EYK G F ++++
Sbjct: 766 MREIERVVLLKVVDTRWMDHIDEMDQLRQGIGLRAYGQVDPVIEYKKIGFDMFEDLVNSI 825
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 826 QEDTVKFL 833
>gi|339007032|ref|ZP_08639607.1| protein translocase subunit SecA [Brevibacillus laterosporus LMG
15441]
gi|338776241|gb|EGP35769.1| protein translocase subunit SecA [Brevibacillus laterosporus LMG
15441]
Length = 824
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/435 (46%), Positives = 290/435 (66%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL +G IAEMKT +VTVN+YLA+RD+
Sbjct: 80 MRHFDVQLIGGMVLQEGRIAEMKTGEGKTLVATLATYLNALAGKGVHIVTVNEYLAERDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++FLG++VGL GM E++R Y CDITY N+E GFDYLRDN+ EQ+
Sbjct: 140 KIMGELYQFLGMTVGLNINGMSAEQKREAYYCDITYGTNNEFGFDYLRDNMVLYKEQMTQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AI+DEVDS+L+DE R PL+ISG A+K Y + + + L ++++ K
Sbjct: 200 R---PLHYAIIDEVDSILVDEARTPLIISGSANKSTELYYICSHFVKRLESETDFSIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
LT+EG++ E A ++L+D N + +ALKA+ ++RDV Y+V++G+ +I
Sbjct: 257 LKIATLTDEGVSKVEKAFNVDNLYDTNHVTLNHHITSALKAQVLFKRDVDYVVQDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK+Q++S+ +A IT Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMVGRRYSDGLHQAIEAKEGLKVQSESMTLATITLQNYFRMYQKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+ +PTN P R+D+ + + K+ +E+ + G+P+LVG
Sbjct: 377 TEEEEFKKIYGLDVVVIPTNRPIQRIDMADAIYKSEDAKYRAVVKEIVERHKKGQPILVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS LL+Q+G+PHNVLNA K REAE VA+AG+ A+TI+TNMAGRGTDI
Sbjct: 437 TISIENSEKLSHLLRQKGVPHNVLNA--KQHEREAEIVARAGQFGAVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKMLAKKII 410
LG G P + II
Sbjct: 495 QLGEGVPAIGGLHII 509
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 163/340 (47%), Gaps = 72/340 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SLQDE+ ++F D
Sbjct: 497 GEGVPAIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLQDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +EDMPIE + R + Q E F RK ++++D+V+ QR+ +Y
Sbjct: 555 IMNMMDRLGMEEDMPIESRLVSRAVESAQKRVEGSNFDARKVVLQYDDVMNKQREVIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL N + + +V++ I+ + P W L+ LL+ ++
Sbjct: 615 RKEILERDN--LHDIVEGMINSVIERIVQAYCPKEQIPEEWDLEGLLETCVS-------- 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F F D NL +G +++ ++ L
Sbjct: 665 --------------------------TFLFEDAITVSNL-KG--KEAEEIEEML------ 689
Query: 768 LTKNGRYRATTNLLRKY--LGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
+ A T L ++ +GD ++A + VV V RAV D W D
Sbjct: 690 -----KEIAHTQLKQRQEEIGD-MMAEFEKVV------------VLRAV-----DSKWMD 726
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
H+ M +L +++R++ +PL EY+ +G F M+++
Sbjct: 727 HIDAMEQLRQGIHLRAYAQTDPLREYQFEGYEMFQGMIAS 766
>gi|374709250|ref|ZP_09713684.1| preprotein translocase subunit SecA [Sporolactobacillus inulinus
CASD]
Length = 839
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/423 (50%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M + VQ+IG LH G+IAEMKT +VTVNDYLA RDA
Sbjct: 80 MTPYYVQLIGAIALHQGNIAEMKTGEGKTLVATMPLYLNALEGKGAHLVTVNDYLASRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M ++ FLG++VGL + G+ PEE+R Y DITY NSE GFDYLRDN+ E+ V
Sbjct: 140 EQMGLLYNFLGMAVGLNRNGLNPEEKREAYAADITYGTNSEFGFDYLRDNMVLYKEERVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+L+DE R PL+ISG A K Y A + A LL + YTV+LK
Sbjct: 200 R---PLNFAIVDEVDSILVDEARTPLIISGNAEKSTDLYVRANQFARLLTEKQDYTVDLK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV+LTEEG+ AE +L+D N V A+KA RD Y+V++G+ +I
Sbjct: 257 TKSVQLTEEGMTKAEKFFGIKNLYDYSNVNINHHVSEAMKAHAIMHRDQDYVVKDGEIVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ TGR+ + RR+SEG+HQA+EAKEGL IQ++S +A IT Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDPFTGRLMQGRRYSEGLHQAIEAKEGLDIQSESKTLATITLQNFFRMYQKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VIE+PTN P IR D P + T +GK+ +E+ ++ G+PVLVG
Sbjct: 377 TEEEEFQSIYNMDVIEIPTNKPMIRKDNPDLIYKTQKGKFNAVVEEIAKLYHRGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S LLK++GIPHNVLNA K AREAE + AG+ ++TI+TNMAGRGTDI
Sbjct: 437 TVAVETSELISKLLKRKGIPHNVLNA--KNHAREAEIIENAGQAGSVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 KLG 497
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 8/169 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFD--T 585
G V LGGL ++GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ ++F D
Sbjct: 497 GEGVADLGGLFILGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMKRFGSDKLK 556
Query: 586 SWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
SW + +I D+ PIE + R + Q E F RK L++FD+V+ QR+ +Y
Sbjct: 557 SW----MEKIGMDDSAPIESKLVSRSVEAAQKRVEGNNFDARKQLLKFDDVMRQQREIIY 612
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L N +I M++V++ ++ + + P W L ++
Sbjct: 613 KQRMEVLESKN--LRPEIEGMMKSVIENVVNAHTPEKEVPEDWDLQAIV 659
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E+ + ++E ER + ++T+D W DH+ M +L + +R++G +P Y I+G +
Sbjct: 700 KEASFTPERLREFERVITLRTVDTKWMDHIDAMEQLREGIYLRAYGQVDPYRAYNIEGFK 759
Query: 858 FFISMLSA 865
F M+++
Sbjct: 760 MFEEMVAS 767
>gi|333896505|ref|YP_004470379.1| protein translocase subunit secA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111770|gb|AEF16707.1| Protein translocase subunit secA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 894
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 283/432 (65%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQIIGGIVLHQGRIAEMKTGEGKTLVAALPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M EER+ Y DITY N+E GFDYLRDN+ E++V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMDSEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L YT++ K
Sbjct: 200 RH---LNYAIVDEVDSILIDEARTPLIISGVGEKSTDLYKRADAFVRTLKNEEDYTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE ++L D EN + + ALKA +RD Y+V++G+ +I
Sbjct: 257 ARAVSLTEKGVEKAEKFFNLDNLADLENIEISHGINQALKAHAIMKRDKDYVVKDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYDKLAGMTGTAL 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKEMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE LS++LK+ GI H VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TITIEKSEKLSNMLKKLGIKHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LAKK
Sbjct: 495 ILGGNPEFLAKK 506
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 106/168 (63%), Gaps = 12/168 (7%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V +LGGL++IGT HESRRIDNQLRGR+GRQGDPG +RF +SL+DE+ + F + +
Sbjct: 557 VVKLGGLYIIGTERHESRRIDNQLRGRSGRQGDPGESRFYISLEDELMRLFG--SERIKN 614
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+++ + ++D PIE + +Q+ Q E F +RKS++E+D+V+ QR+ +Y R+
Sbjct: 615 MMNTLGIEDDQPIEHKILTKQIEQAQKKVEGINFDVRKSVLEYDDVMNKQREIIYKERRK 674
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPL----KHPRYWSLDKLL 694
+L G + + QY+ +V +II NV+ K+P W ++ LL
Sbjct: 675 VLEG------EDLRQYILDMVKDIIRRNVEIYTAGSKYPEEWDIEGLL 716
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+K +D W DH+ M++L + +R++G +P+ EYK G F ++++
Sbjct: 766 MREIERIVLLKVVDTRWMDHIDEMDQLRQGIGLRAYGQVDPVIEYKKIGYEMFEDLVNSI 825
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 826 QEDTVRFL 833
>gi|258512513|ref|YP_003185947.1| preprotein translocase subunit SecA [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479239|gb|ACV59558.1| preprotein translocase, SecA subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 796
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/422 (50%), Positives = 273/422 (64%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH+G +AEMKT VVTVNDYLA+RDAE
Sbjct: 79 RHFDVQLMGGIVLHEGRVAEMKTGEGKTLVATLPAYLNALTGEGVHVVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ +VHRFLGL+VG M P ++R YR DITY N+E GFDYLRDN+ + E +V R
Sbjct: 139 YTGKVHRFLGLTVGYNGPDMTPAQKREAYRADITYGTNNEFGFDYLRDNMVMSLEDMVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A K Y A + L G Y V+ K
Sbjct: 199 ---KLHYAIVDEVDSILIDEARTPLIISGPAEKSADLYFRADMLVRRLKPGEDYEVDEKM 255
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LTE G+ AE N+L+D EN + ALKA +RD Y+V + I+
Sbjct: 256 RTANLTESGVKKAEQFFRVNNLFDPENVTLMHHITQALKAHGLMKRDKDYVVIGDEVHIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+K+Q +S +A IT Q+ F++Y KL+GMTGTAKT
Sbjct: 316 DEFTGRILHGRRYSEGLHQAIEAKEGVKVQNESKTLATITLQNYFRMYEKLAGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEF++++ M V+ +PTN P IRVDL + T R K+ +EV G+PVLVG+
Sbjct: 376 EEKEFIEIYGMDVVVIPTNRPMIRVDLDDVVYKTERAKFRAVVEEVARRHAKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TS+E SE LS +L ++GIPH VLNA K+ REAE VA AG++ +TI+TNMAGRGTDII
Sbjct: 436 TSIEKSELLSRMLHERGIPHQVLNA--KHHEREAEIVALAGQRGMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 495 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLLRLFGSDNIK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ DED PIE + + Q E + +RK ++ +D+VL QR+ +Y
Sbjct: 555 R--LMDRLGLDEDQPIEQKMLTNAIERAQKKVEGNNYDLRKHVLRYDDVLNKQREVIYRQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ IL E + ++ ++D ++ + P W L L++
Sbjct: 613 RRQILE--REDLRSIVEGMLEDLIDHMLEVYCSEEQVPEDWDLQALVQ 658
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M ++ER VL++ +D W DH+ M++ +V++RS+G +PL Y+ +G F +M+ +
Sbjct: 706 MHQLERLVLLRAVDSKWMDHIDAMDQFRQSVHLRSYGQADPLVIYQKEGFEMFEAMIHS 764
>gi|291278479|ref|YP_003495314.1| preprotein translocase subunit A [Deferribacter desulfuricans SSM1]
gi|290753181|dbj|BAI79558.1| preprotein translocase, subunit A [Deferribacter desulfuricans
SSM1]
Length = 858
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 289/439 (65%), Gaps = 45/439 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 81 MRHFDVQILGGYVLHKGKIAEMKTGEGKTLVATLALYLNALTEKGAHLVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQR----------------GMIPEERRSNYRCDITYTNNSELGF 81
WM ++ FLGL+VG+IQ ++ +R++ Y+ DITY N+E GF
Sbjct: 141 MWMAPIYLFLGLTVGVIQHEISYLVEWDNKEKFTTKLVECDRKTAYQADITYGTNNEFGF 200
Query: 82 DYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK 141
DYLRDN+ + V R H+AIVDEVDS+LIDE R PL+ISG + +Y +
Sbjct: 201 DYLRDNMKYDINDYVQR---DLHYAIVDEVDSILIDEARTPLIISGPTDERTDKYYEIDR 257
Query: 142 VAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
V +L + YTV+ K+ +V+LT+ GI E AL ++L+D + FV NALKA
Sbjct: 258 VVRVLKKDEDYTVDEKSRTVKLTDSGINKIEKALNIDNLFDVRHVDTLHFVNNALKAHAL 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
++RDV Y+V++GK +I++E TGR+ RR+SEG+HQA+EAKEG++I++++ +A IT+Q+
Sbjct: 318 FKRDVDYVVQDGKVIIVDEFTGRLMPGRRFSEGLHQALEAKEGVEIESENQTLASITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA TE +EF +++ + VI +PT+ P IR D P + TA+ K++
Sbjct: 378 YFRMYEKLAGMTGTAATEAQEFREIYGLDVIVIPTHKPMIRKDFPDVIYRTAKEKYDAIV 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
E+ M +GRPVLVG+TS+E SEYLS LL+++GIPH VLNA KY REA+ VA+AG K
Sbjct: 438 DEIVEMHSIGRPVLVGTTSIEKSEYLSKLLRKKGIPHEVLNA--KYHEREAQIVAKAGEK 495
Query: 381 YAITISTNMAGRGTDIILG 399
A+TI+TNMAGRGTDI LG
Sbjct: 496 KAVTIATNMAGRGTDIKLG 514
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F D
Sbjct: 514 GPGVAELGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSLEDDLLRIFGSDKIS 573
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A+ ++++ E PIE I R + Q E +F IRK L+E+D V+ QR+ VY L
Sbjct: 574 AI--MNKLGMKEGEPIEHPLISRAIENAQKKVEAMHFEIRKHLLEYDNVMNQQRQVVYTL 631
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD- 706
R++IL G + + ++++ V+D +I +D P + S K +++ I + D
Sbjct: 632 RRTILEGKD--LDDIVNEHIENVLDGLIKEFIDAPDDPDFESFAKSIEKIFDIKIDLTDR 689
Query: 707 DLFAGISGD--TLLKSIEELPELNSIDINNFYF 737
I D +L+ I E E+ +I Y+
Sbjct: 690 QSKKDIDEDKKVILQKINEKIEMKKNEIGEHYY 722
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R +L+ LD W++HL+NM+ L +V +R +G ++PL EYK + F+ M++ R++
Sbjct: 726 RFLLINILDNRWKEHLLNMDYLRDSVGLRGYGQKDPLIEYKRESYNLFMDMMN---RISF 782
Query: 872 ESLVQYWS 879
E V++ S
Sbjct: 783 E-FVEFLS 789
>gi|421501215|ref|ZP_15948185.1| preprotein translocase, SecA subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|402266198|gb|EJU15641.1| preprotein translocase, SecA subunit [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 889
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 293/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G I EMKT V+TVNDYLA RD
Sbjct: 81 LRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATAPVYLNALSGRGVHVITVNDYLATRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+ FLGL+ G+I GM ++RR+ Y+CDITY NSE GFDYLRDN+ A+ + V
Sbjct: 141 EMMGRVYSFLGLTSGVIVNGMYGKDRRAAYQCDITYGTNSEFGFDYLRDNMVASVGEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++ IVDEVDS+LIDE R PL+ISG +S + Y VA +V LL +
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGASSDTIKWYQVAYQVVSLLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K ++ LTE+G++ E L+ ++L+ EN ++ A
Sbjct: 258 IKEKKEMNIPDEKWGDYEVDEKAKNIVLTEKGVSKVEKLLKLDNLYSPENVEITHYINQA 317
Query: 195 LKAKEFYRRDVQYIVRN-GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR+ G+ +II+E TGR E RR+S+G+HQA+EAKE ++I ++ +
Sbjct: 318 LKAKELFKRDRDYLVRDTGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEDVRIAGENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTN P IR D + T
Sbjct: 378 ATITLQNYFRMYQKLSGMTGTAETEATEFVHTYGLEVVVIPTNEPVIRKDHSDLVYKTKE 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K E ++E +++ G+PVLVG+ S+++SE LSDL+ ++GIPHNVLNA KY A+EAE
Sbjct: 438 EKLEAIIAKIEELYQKGQPVLVGTVSIQSSEELSDLIHKKGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGRK ++TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 VAQAGRKNSVTIATNMAGRGTDIMLGGNPEFLA 528
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 73/389 (18%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A++ LG A YL V C E EV LGGL+++GT HESRRIDNQLRGR+GR
Sbjct: 528 AIHELGSREAENYLEVFAKYVKQCEEERKEVLSLGGLYILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG ++F +SL+D++ + F D AV + ++ PI I + + Q E
Sbjct: 588 QGDPGESQFFLSLEDDLMRLFGSDRVKAV--MEKLGLPHGEPITHSMINKAIENAQTKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ Q R +I NE A+V E + N+
Sbjct: 646 SRNFGIRKNLLEFDDVMNKQ-------RTAIYASRNE-----------ALVKEDLKENIL 687
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ H ++ K F + G++ +D DI
Sbjct: 688 SMLHDVIYT-----KTFQFLQGEVKEDW----------------------DIQ------- 713
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNL--LRKYLGDILIASYLNVVQ 798
+L ++LA D + ++ + N+ L D L ++Y +
Sbjct: 714 ---------------ALAKYLAERFDYVIEDEKEYMAMNVEDYAALLYDRLASAYEE--K 756
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
E+R M+++E+ +L + +D WR+HL ++ L + +R++G +NP+ EYK+
Sbjct: 757 ENRIGSEVMRKIEKYILFEVVDARWREHLKALDGLREGIYLRAYGQKNPVTEYKLISSEI 816
Query: 859 FISMLSATRRLTVESLVQYWSSPMESQEL 887
+ ML + L + ES+ L
Sbjct: 817 YEKMLETIQEEITSFLFKIVIKTEESERL 845
>gi|343521003|ref|ZP_08757971.1| preprotein translocase, SecA subunit [Parvimonas sp. oral taxon 393
str. F0440]
gi|343396209|gb|EGV08746.1| preprotein translocase, SecA subunit [Parvimonas sp. oral taxon 393
str. F0440]
Length = 906
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/452 (48%), Positives = 287/452 (63%), Gaps = 50/452 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ+IGG VLH+G IAEMKT +VTVNDYLA+RD
Sbjct: 78 MKHYRVQLIGGVVLHEGRIAEMKTGEGKTLVATLPSYLNALTGKGVHIVTVNDYLAKRDK 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++H FLGL VG I G+ +ERR NY CDITY NSE GFDYLRDN+ E+LV
Sbjct: 138 EWMGKIHEFLGLKVGCILHGLSNDERRENYNCDITYGTNSEFGFDYLRDNMVVYKEELVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R ++AIVDEVDS+LIDE R PL+ISGE + Y +A +
Sbjct: 198 RG---LNYAIVDEVDSILIDEARTPLIISGEGDQSTDLYALADRFVKSLKGRIADPSEEN 254
Query: 144 ------ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALK 196
EL + + + V K+ + LTE G AE +L D N A + ALK
Sbjct: 255 EDFYNRELREETVDFVVNEKHKTANLTEIGTEKAEEFFGLVNLSDPVNMEVAHHINQALK 314
Query: 197 AKEFYRRDVQYIVRN-GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
A +RDV Y+V + G+ LI++E TGR+ E RR+SEG+HQA+EAKEG++I+++S +A
Sbjct: 315 ANNTMQRDVDYVVSDDGEILIVDEFTGRIMEGRRYSEGLHQAIEAKEGVEIKSESRTLAT 374
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
ITYQ+ F++Y KL+GMTGTAKTEE EF +++ M VIE+PTN P IR+D + + T K
Sbjct: 375 ITYQNYFRMYEKLAGMTGTAKTEEDEFNEIYHMDVIEIPTNKPVIRIDHHDRVYLTEEAK 434
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
++ +E+E + G+PVLVG+ S+E SE LS +LK++ I H+VLNA K+ AREAE VA
Sbjct: 435 FKAIVEEIERIHATGQPVLVGTISIEISELLSAMLKKKRIEHDVLNA--KFHAREAEIVA 492
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
QAG +TI+TNMAGRGTDI+LGGNP +AK
Sbjct: 493 QAGVFGKVTIATNMAGRGTDILLGGNPDFMAK 524
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 87/341 (25%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD--------EMFQKFSFDTS 586
GGL ++GT HESRRIDNQLRGR+GRQGDPG +RF VSL D E QKF+ + +
Sbjct: 580 GGLFIVGTERHESRRIDNQLRGRSGRQGDPGESRFFVSLTDNLMRLFGGEAIQKFAMNRN 639
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ D D +E + +++ Q E FGIRK+++++D+V+ VQR
Sbjct: 640 Y----------DPDEVLEFGTVTKRIERAQERVEANNFGIRKNVLKYDDVMNVQR----- 684
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
I++ +AV+D + +K S+ ++L EFI
Sbjct: 685 --------------NVIYKERRAVLDG------EDMKD----SIQEMLIEFID------- 713
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
A + + K IE L +L + I N Y P +G+ ++
Sbjct: 714 ---ATVEQYSTGKVIE-LSDL-KMAIENAYLPHNLLDFEEMKGLNKQE------------ 756
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
L+ Y+ D+ Y +E + M+EVER +++ +D W DH
Sbjct: 757 --------------LKSYITDVSQKFYAE--KEELIGEEQMREVERVIMLMVVDRKWMDH 800
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ M++L + +RS+G ++P+ Y +G F M + R
Sbjct: 801 IDAMDQLRQGIGIRSYGQQDPVRAYGAEGFEMFNEMNESIR 841
>gi|254776640|ref|ZP_05218156.1| preprotein translocase subunit SecA [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 940
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLSGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V ++ G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRTDQSDLIYKTEEAKYIAVVDDVVERYQKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ IPHNVLNA KY +EA VA AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRIPHNVLNA--KYHEQEAGIVAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 7/160 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD-LIS 593
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A++ +++
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFN---GAALEVMLN 601
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL
Sbjct: 602 RLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILE 661
Query: 654 GANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
G E+ +Q + ++ VV + G + W LD L
Sbjct: 662 G--ENLKEQALEMVRDVVTAYVNGATAE-GYAEDWDLDAL 698
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+++ E
Sbjct: 820 KEESVGFLFNVTVEAVPAPQVAPVQTPE 847
>gi|417748908|ref|ZP_12397321.1| preprotein translocase, SecA subunit [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336459551|gb|EGO38487.1| preprotein translocase, SecA subunit [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 940
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLSGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V ++ G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRTDQSDLIYKTEEAKYIAVVDDVVERYQKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ IPHNVLNA KY +EA VA AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRIPHNVLNA--KYHEQEAGIVAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 5/159 (3%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEA--MLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
E+ +Q + ++ VV + G + W LD L
Sbjct: 663 --ENLKEQALEMVRDVVTAYVNGATAE-GYAEDWDLDAL 698
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+++ E
Sbjct: 820 KEESVGFLFNVTVEAVPAPQVAPVQTPE 847
>gi|340754808|ref|ZP_08691541.1| translocase subunit secA [Fusobacterium sp. D12]
gi|313686366|gb|EFS23201.1| translocase subunit secA [Fusobacterium sp. D12]
Length = 889
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 293/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G I EMKT V+TVNDYLA RD
Sbjct: 81 LRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATAPVYLNALSGRGVHVITVNDYLATRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+ FLGL+ G+I GM ++RR+ Y+CDITY NSE GFDYLRDN+ A+ + V
Sbjct: 141 EMMGRVYSFLGLTSGVIVNGMYGKDRRAAYQCDITYGTNSEFGFDYLRDNMVASVGEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++ IVDEVDS+LIDE R PL+ISG +S + Y VA +V LL +
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGASSDTIKWYQVAYQVVSLLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K ++ LTE+G++ E L+ ++L+ EN ++ A
Sbjct: 258 IKEKKEMNIPDEKWGDYEVDEKAKNIVLTEKGVSKVEKLLKLDNLYSPENVEITHYINQA 317
Query: 195 LKAKEFYRRDVQYIVRN-GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR+ G+ +II+E TGR E RR+S+G+HQA+EAKE ++I ++ +
Sbjct: 318 LKAKELFKRDRDYLVRDTGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEDVRIAGENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTN P IR D + T
Sbjct: 378 ATITLQNYFRMYQKLSGMTGTAETEATEFVHTYGLEVVVIPTNEPVIRKDHSDLVYKTKE 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K E ++E +++ G+PVLVG+ S+++SE LSDL+ ++GIPHNVLNA KY A+EAE
Sbjct: 438 EKLEAIIAKIEELYQKGQPVLVGTVSIQSSEELSDLIHKKGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGRK ++TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 VAQAGRKNSVTIATNMAGRGTDIMLGGNPEFLA 528
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 73/389 (18%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A++ LG A YL V C E EV LGGL+++GT HESRRIDNQLRGR+GR
Sbjct: 528 AIHELGSREAENYLEVFAKYVKQCEEERKEVLSLGGLYILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG ++F +SL+D++ + F D AV + ++ PI I + + Q E
Sbjct: 588 QGDPGESQFFLSLEDDLMRLFGSDRVKAV--MEKLGLPHGEPITHSMINKAIENAQTKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ Q R +I NE A+V E + N+
Sbjct: 646 SRNFGIRKNLLEFDDVMNKQ-------RTAIYASRNE-----------ALVKEDLKENIL 687
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
+ H ++ K F + G++ +D DI
Sbjct: 688 SMLHDVIYT-----KTFQFLQGEVKEDW----------------------DIQ------- 713
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNL--LRKYLGDILIASYLNVVQ 798
+L ++LA D + ++ + N+ L D L ++Y +
Sbjct: 714 ---------------ALAKYLAERFDYVIEDEKEYMAMNVEDYAALLYDRLASAYEE--K 756
Query: 799 ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
E+R M+++E+ +L + +D WR+HL ++ L + +R++G +NP+ EYK+
Sbjct: 757 ENRIGSEVMRKIEKYILFEVVDARWREHLKALDGLREGIYLRAYGQKNPVTEYKLISSEI 816
Query: 859 FISMLSATRRLTVESLVQYWSSPMESQEL 887
+ ML + L + ES+ L
Sbjct: 817 YEKMLETIQEEITSFLFKIVIKTEESERL 845
>gi|326772048|ref|ZP_08231333.1| preprotein translocase, SecA subunit [Actinomyces viscosus C505]
gi|326638181|gb|EGE39082.1| preprotein translocase, SecA subunit [Actinomyces viscosus C505]
Length = 943
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/433 (50%), Positives = 281/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 DLMGRVHRFLGLTTGCILVGQTPAERREQYACDITYGTNNEFGFDYLRDNMAQRPEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG AS DV + Y A ++E L G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPASGDVNKWYKEFATISERLRAGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 256 KKRTVGVLAAGIERVEDYLGVDNLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + T K + ++ LG+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIRQDQPDLVYTTVEAKLDAVVDDIAERHELGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L++QGIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEILSERLREQGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 10/208 (4%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + F+
Sbjct: 539 CRAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMRMFA- 597
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ A ++S +D+P+E + R + G Q E + IRK+++++D+V+ QR+
Sbjct: 598 -SGLAQRIMSSGAYPDDVPLESKMVTRGIAGAQRQVESRNYEIRKNVLKYDDVMTEQREK 656
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI--A 701
VY R+ +L G + + F+ QAV + G + P W LD L E +
Sbjct: 657 VYSERRQVLDGEDLEPQIEAFR-AQAVTSIVEAGTAE--GRPDEWDLDALWGELGRLYPV 713
Query: 702 GKILDDLFAGISGDTLLKS---IEELPE 726
G D++ + G L S IEEL E
Sbjct: 714 GLTQDEVVEALGGKNALTSERLIEELTE 741
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER +L+ +D WR+HL M+ L + +R+ R+PL EY +G R F +M+
Sbjct: 769 MRTLERRILLAVVDKRWREHLYEMDYLKEGIGLRAMAQRDPLVEYANEGARMFRAMMEGI 828
Query: 867 RRLTVESL 874
R TVE +
Sbjct: 829 REETVEQI 836
>gi|453069908|ref|ZP_21973161.1| preprotein translocase subunit SecA [Rhodococcus qingshengii BKS
20-40]
gi|452762453|gb|EME20749.1| preprotein translocase subunit SecA [Rhodococcus qingshengii BKS
20-40]
Length = 947
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 282/429 (65%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 82 KHFHVQIMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR LGL +I GM P ERR Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRALGLETSVILSGMTPAERRVAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 202 G---HAFAIVDEVDSILIDEARTPLIISGPADGSSKWYSEFARIAPLLKKDVHYEVDIRK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 259 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + + + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 379 EAAELHQTYTLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHENGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA +A+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEKEATIIAEAGRSGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+VL + + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 529 AVLDEVKAEVKADAEKVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 588
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++ F+ S +++R+ +D+PIE + + + Q E+ F IRK+++++D
Sbjct: 589 DELMRR--FNGSALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYD 646
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
EV+ QR +Y R+ IL G E Q+ Q + VV + G
Sbjct: 647 EVMNQQRTVIYKERRQILEG--EDMEGQVEQMITDVVTAYVDG 687
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V + LD WR+HL M+ L + +R+ R+PL EY+ +G FI ML
Sbjct: 764 MRELERRVFLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFIGMLDGL 823
Query: 867 RRLTVESL--VQYWSSPME 883
+ +V L +Q ++P +
Sbjct: 824 KEESVGFLFNLQVEAAPAQ 842
>gi|259509945|sp|C0ZWZ6.1|SECA_RHOE4 RecName: Full=Protein translocase subunit SecA
gi|226184777|dbj|BAH32881.1| preprotein translocase SecA subunit [Rhodococcus erythropolis PR4]
Length = 947
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 282/429 (65%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 82 KHFHVQIMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR LGL +I GM P ERR Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 142 WMGRVHRALGLETSVILSGMTPAERRVAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 202 G---HAFAIVDEVDSILIDEARTPLIISGPADGSSKWYSEFARIAPLLKKDVHYEVDIRK 258
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 259 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 319 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + + + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 379 EAAELHQTYTLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHENGQPVLIGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA +A+AGR A+T++TNMAGRGTD++
Sbjct: 439 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEKEATIIAEAGRSGAVTVATNMAGRGTDVV 496
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 497 LGGNPDIIA 505
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+VL + + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 529 AVLDEVKAEVKADAEKVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 588
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++ F+ S +++R+ +D+PIE + + + Q E+ F IRK+++++D
Sbjct: 589 DELMRR--FNGSALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYD 646
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
EV+ QR +Y R+ IL G E Q+ Q + VV + G
Sbjct: 647 EVMNQQRTVIYKERRQILEG--EDMEGQVEQMITDVVTAYVDG 687
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V + LD WR+HL M+ L + +R+ R+PL EY+ +G FI ML
Sbjct: 764 MRELERRVFLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFIGMLDGL 823
Query: 867 RRLTVESL--VQYWSSPME 883
+ +V L +Q ++P +
Sbjct: 824 KEESVGFLFNLQVEAAPAQ 842
>gi|310823278|ref|YP_003955636.1| protein translocase subunit SecA [Stigmatella aurantiaca DW4/3-1]
gi|309396350|gb|ADO73809.1| Protein translocase subunit SecA [Stigmatella aurantiaca DW4/3-1]
Length = 936
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 285/430 (66%), Gaps = 29/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQLVGGMFLHEGCIAEMRTGEGKTLTATLPTYLNALSGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+RF+G++ G I + ++R+ +YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 WMGRVYRFMGMTTGCILHELTDKQRQESYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG +Y +V +V YT++ K
Sbjct: 202 ---ELNYAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGMVPDQDYTLDEKG 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L ++L+D + V AL+A Y+RD Y+V++G+ +I+
Sbjct: 259 RSVSLTDDGIEKLQKRLSISNLYDPGEIETLHHVEQALRAHTLYKRDKDYVVKDGEVMIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQAVEAKEG+KI+ ++ +A I++Q+ F++Y KLSGMTGTA T
Sbjct: 319 DEFTGRLMPGRRWSDGLHQAVEAKEGVKIENENQTLATISFQNYFRMYSKLSGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN P +R DL + T R K+E A +E+E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLDVRVIPTNRPMVRKDLQDLVYKTEREKFEAAAKEIEELNKKGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE +S LK++G+PHNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVSSFLKKRGVPHNVLNA--KQHQREADIVAQAGRKGAVTISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAK 407
LGGN +++ K
Sbjct: 497 LGGNAEVMTK 506
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 26/197 (13%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
+ E +EV LGGL ++GT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ +
Sbjct: 548 DAQTKAERAEVMGLGGLFILGTERHESRRIDNQLRGRAGRQGDPGASRFYLSLEDDLMRI 607
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F + L+ R+ +E IE + R + G Q E + F IRK+L+E+D+V+ Q
Sbjct: 608 FG--SERISGLMERLGMEEGEVIEHAWLSRAIEGAQKRVEGHNFDIRKNLLEYDDVMNQQ 665
Query: 641 RKHVYDLRQSILTGA--------------------NESCSQQIFQYMQ-AVVDEIIFGNV 679
R+ +Y LR+ +L + S F+ M ++++I G
Sbjct: 666 RRTIYKLRRQVLAAGAGLPLVEYDEDKKTRAKIRTERTISWADFKEMVLDALEDVIVGQA 725
Query: 680 D---PLKHPRYWSLDKL 693
D P K+P W L+ L
Sbjct: 726 DTYLPTKNPTTWDLESL 742
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
T+D W+DHL+ M+ L + +R +G ++P +EYK +G FI ML A + V +++
Sbjct: 799 TIDQLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGYSGFIQMLGAIKTQFVSQMMR 857
>gi|296168967|ref|ZP_06850635.1| preprotein translocase subunit SecA, partial [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896366|gb|EFG76020.1| preprotein translocase subunit SecA [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 908
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRTDCSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ +PHNVLNA KY +EA+ VA AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRVPHNVLNA--KYHEQEAQIVAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L + E +EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 525 SELPKVKEEAGKEAAEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 584
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++F+ A +++R+ +D+PIE + R + Q E+ F +RK+++++D
Sbjct: 585 DELMRRFNGAALEA--MLNRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYD 642
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
EV+ QRK +Y R+ IL G E+ +Q ++ VV + G
Sbjct: 643 EVMNQQRKVIYAERRRILEG--ENLKEQALDMVRDVVTAYVDG 683
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|315649818|ref|ZP_07902901.1| preprotein translocase, SecA subunit [Paenibacillus vortex V453]
gi|315274792|gb|EFU38173.1| preprotein translocase, SecA subunit [Paenibacillus vortex V453]
Length = 837
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/422 (47%), Positives = 286/422 (67%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD++
Sbjct: 81 RHYDVQLVGGMALHEGRIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSQ 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLGL+VG+ GM +++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMAQIYNFLGLTVGVNLSGMEHPDKQHAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YTV++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKRLTAEEDYTVDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE+G+A AE + +L+D+N ++ ALKA RRDV Y+V + + +I+
Sbjct: 258 KSVALTEKGVAQAERSFGIENLYDQNHVTLNHHIVQALKANVIMRRDVDYVVTDDEVVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKEG+++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKEGIEVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN R D+P + + GK++ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNKPNQRNDMPDVVYKSEEGKFKAVVTEIVERHKKNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++GI H VLNA KY A EAE +++AG+ ++TI+TNMAGRGTDI+
Sbjct: 438 VSIENSERLSEMLKRKGIQHKVLNA--KYHAEEAEIISRAGQPGSVTIATNMAGRGTDIL 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 172/340 (50%), Gaps = 72/340 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ +GGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVQNIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGTDN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLNMMERLGFEEDQPIESKMITRAVESAQKRVEGNNFDMRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ IL ++ Q + + M+ V++ ++ + D + P W L + + +F + K+LD
Sbjct: 615 RREIL--ESQDIKQIVVEMMKPVIERVVQAHCSDDI--PENWELQE-VADF--VNSKLLD 667
Query: 707 DLFAGISGDTLL-KSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
+ I+ + L K EE+ E +F + +K + +R AI
Sbjct: 668 E--GAITREDLWGKESEEITEF------------------IFERVMKKYA--EREEAI-- 703
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
G+ ++ + V+ V RAV D W D
Sbjct: 704 --------------------GEEMVREFEKVI------------VLRAV-----DSKWMD 726
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
H+ M++L +++R++G +PL EY+ +G F +M++
Sbjct: 727 HIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMIAT 766
>gi|229489613|ref|ZP_04383476.1| preprotein translocase, SecA subunit [Rhodococcus erythropolis
SK121]
gi|229323710|gb|EEN89468.1| preprotein translocase, SecA subunit [Rhodococcus erythropolis
SK121]
Length = 960
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 282/429 (65%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HF VQI+GGA LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 95 KHFHVQIMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNAIAGDGVHVVTVNDYLAKRDSE 154
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR LGL +I GM P ERR Y DITY N+E GFDYLRDN+ + + LV R
Sbjct: 155 WMGRVHRALGLETSVILSGMTPAERRVAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQR 214
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++A LL + +HY V+++
Sbjct: 215 G---HAFAIVDEVDSILIDEARTPLIISGPADGSSKWYSEFARIAPLLKKDVHYEVDIRK 271
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E G+ L E L ++L++ N P ++ NA+KAKE Y +D YIVR+G+ +I+
Sbjct: 272 RTIGVHEAGVELVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRDGEVIIV 331
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 332 DEFTGRVLVGRRYNEGMHQAIEAKEKVEIKAENQTLATITLQNYFRLYDKLSGMTGTAET 391
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + + + VI +PTN P +RVD + T K++ +V G+PVL+G+
Sbjct: 392 EAAELHQTYTLGVIPIPTNRPMVRVDNGDLIYKTEEAKFDAVVDDVVERHENGQPVLIGT 451
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++G+ HNVLNA K+ +EA +A+AGR A+T++TNMAGRGTD++
Sbjct: 452 TSVERSEYLSKQFTKRGVAHNVLNA--KFHEKEATIIAEAGRSGAVTVATNMAGRGTDVV 509
Query: 398 LGGNPKMLA 406
LGGNP ++A
Sbjct: 510 LGGNPDIIA 518
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+VL + + + +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 542 AVLDEVKAEVKADAEKVRDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 601
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++ F+ S +++R+ +D+PIE + + + Q E+ F IRK+++++D
Sbjct: 602 DELMRR--FNGSALESIMTRLNLPDDVPIEAKMVSKAIKSAQTQVEQQNFEIRKNVLKYD 659
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
EV+ QR +Y R+ IL G E Q+ Q + VV + G
Sbjct: 660 EVMNQQRTVIYKERRQILEG--EDMEGQVEQMITDVVTAYVDG 700
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V + LD WR+HL M+ L + +R+ R+PL EY+ +G FI ML
Sbjct: 777 MRELERRVFLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFIGMLDGL 836
Query: 867 RRLTVESL--VQYWSSPME 883
+ +V L +Q ++P +
Sbjct: 837 KEESVGFLFNLQVEAAPAQ 855
>gi|379029594|dbj|BAL67327.1| preprotein translocase subunit [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
Length = 949
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL G+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQGGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 496 LGGNVDFLTDQRLRERGL 513
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 537 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 594
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 595 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 654
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 655 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 711
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 712 ----------GITADSLT---------------------------------RKDHEFER- 727
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 728 -----DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 775
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 776 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
>gi|389579158|ref|ZP_10169185.1| preprotein translocase, SecA subunit [Desulfobacter postgatei 2ac9]
gi|389400793|gb|EIM63015.1| preprotein translocase, SecA subunit [Desulfobacter postgatei 2ac9]
Length = 841
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 283/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG LH G+IAEMKT +VTVNDYLA+RDA
Sbjct: 81 LRHYDVQLIGGIALHRGTIAEMKTGEGKTLMSTLPAYLNALTGKGVHIVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGL+VG+I M +ER+ Y DITY N+E GFDYLRDN+ + E+L
Sbjct: 141 EWMSQVYEFLGLTVGVILHDMGSQERKQAYTADITYGTNNEFGFDYLRDNMKFDPEELAQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFAIVDEVDS+LIDE R PL+ISG A K Y A + + YT++ +
Sbjct: 201 R---DLHFAIVDEVDSILIDEARTPLIISGPAEKSTHLYTHANAIIPAFKKDTDYTLDEE 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTEEGIA E L +L+D N + ALKA ++RD YIV+NG+ +I
Sbjct: 258 SKTVSLTEEGIAKGEALLNVENLYDPANIELLHHLNQALKAHVIFKRDTDYIVKNGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KI+ ++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMSGRRYSEGLHQALEAKEGVKIENENQTLASITFQNYFRMYDKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + V+ +PT+ P +R D + T + K++ A +E+ + + G+PVLVG
Sbjct: 378 TEAEEFKKIYNLDVLVIPTHKPMVRDDRADLIYKTQKEKYDAAIKEIIRLHKKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S++ SE LS+ LK++GIPHNVLNA K+ EAE VA AG+K A+TISTNMAGRGTDI
Sbjct: 438 TISIDVSESLSEKLKKKGIPHNVLNA--KHHKEEAEIVANAGQKGAVTISTNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 496 KLGEGVKELG 505
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 106/181 (58%), Gaps = 7/181 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH++GTS HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 498 GEGVKELGGLHILGTSRHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLLRIFGGDRIH 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV + R+ ++ IE I + + Q E + F IRK L+E+D+V+ QR+ +Y
Sbjct: 558 AV--MDRLGIEDGEHIEHKFISKAIENAQSKVEGHNFEIRKHLLEYDDVMNQQREIIYRQ 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ L A++ Q M+ V +++ G V + W L+ L AI G+ D
Sbjct: 616 RRQAL--ASKDLKQVAHDMMEDVSYDLVEGFVVDKTALKEWDLEGLSS---AIKGQFNMD 670
Query: 708 L 708
L
Sbjct: 671 L 671
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E Y ++ VER ++++T+D W++HL+NM+ L + +R + ++PL YK +G
Sbjct: 701 REEMYGPEIIRHVERFIILQTVDTRWKEHLLNMDHLKEGIGLRGYAQQDPLRIYKKEGFD 760
Query: 858 FFISMLSATRRLTVESLVQYW-SSPMESQEL 887
F +++ ++ V+ L + +SP + +++
Sbjct: 761 MFQDLMNRIKKEVVDILFKIQIASPTQVEQM 791
>gi|343523366|ref|ZP_08760327.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
175 str. F0384]
gi|343399583|gb|EGV12104.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
175 str. F0384]
Length = 943
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/433 (50%), Positives = 281/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 DLMGRVHRFLGLTTGCILVGQTPAERREQYACDITYGTNNEFGFDYLRDNMAQRPEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG AS DV + Y A ++E L G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPASGDVNKWYKEFATISERLRAGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 256 KKRTVGVLATGIERVEDYLGVDNLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + T K + ++ LG+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIRQDQPDLVYTTVEAKLDAVVDDIAERHELGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L++QGIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEILSERLREQGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 10/208 (4%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + F+
Sbjct: 539 CRAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMRMFA- 597
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ A ++S +D+P+E + R + G Q E + IRK+++++D+V+ QR+
Sbjct: 598 -SGLAQRIMSSGAYPDDVPLESKMVTRGIAGAQRQVESRNYEIRKNVLKYDDVMTEQREK 656
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI--A 701
VY R+ +L G + + F+ QAV + G + P W LD L E +
Sbjct: 657 VYSERRQVLDGEDLEPQIEAFR-AQAVTSIVEAGTAE--GRPDEWDLDALWGELGRLYPV 713
Query: 702 GKILDDLFAGISGDTLLKS---IEELPE 726
G D++ + G L S IEEL E
Sbjct: 714 GLTQDEVVEALGGKNALTSERLIEELTE 741
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER +L+ +D WR+HL M+ L + +R+ R+PL EY +G R F +M+
Sbjct: 769 MRTLERRILLAVVDKRWREHLYEMDYLKEGIGLRAMAQRDPLVEYANEGARMFRAMMEGI 828
Query: 867 RRLTVESL 874
R TVE +
Sbjct: 829 REETVEQI 836
>gi|334139311|ref|ZP_08512703.1| preprotein translocase, SecA subunit [Paenibacillus sp. HGF7]
gi|333602124|gb|EGL13555.1| preprotein translocase, SecA subunit [Paenibacillus sp. HGF7]
Length = 834
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 287/422 (68%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLH+G IAEM+T VVTVNDYLAQRD+
Sbjct: 81 RHYDVQLIGGMVLHEGKIAEMRTGEGKTLVGTLPVYLNALAGKGVHVVTVNDYLAQRDSG 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VG+ + E+++ Y CD+TY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYDFLGMTVGVNLHDLSHEQKQGAYACDVTYGTNNEYGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +FA++DEVDS+L+DE R PL+ISG+A+K Y A + L YTV++K
Sbjct: 201 ---PLYFAVIDEVDSILVDEARTPLIISGQAAKSTDLYYAADRFVSKLEAEKDYTVDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE+G+ AE A +L+D +N V ALKA+ RRDV Y+V++ + LI+
Sbjct: 258 RSVSLTEQGVEKAEKAFGIENLFDHQNVTLNHHVTQALKARVIMRRDVDYVVQDDEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE L++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMTGRRYSEGLHQAIEAKEQLQVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + VI VPTN P IR D+P + T GK++ +E+ ++ +PVLVG+
Sbjct: 378 EEEEFKKIYGLDVIIVPTNRPMIRKDMPDVVYKTEMGKFKAVVEEIVERYKNKQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE V++AG+ A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSELLSEMLKKKGVQHKVLNA--KYHAEEAEIVSRAGQAGAVTIATNMAGRGTDIM 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G +V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL DE+ ++F +
Sbjct: 497 GDQVHEIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLGDELMKRFGAENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 557 A--MMDRLGMEEDQPIESKLITRAIESAQKRVEGNNFDMRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L +E+ + + +++ ++ I+ + + P W L ++
Sbjct: 615 RREVLE--SENIREIVETMLRSSIERIVNAHCSESQIPEEWDLQAVV 659
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+M+E E+ V+++ +D W DH+ M++L +++R++G +PL EY+ +G F M+ +
Sbjct: 708 FMREFEKVVVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHEMVDS 767
Query: 866 TR 867
+
Sbjct: 768 IQ 769
>gi|115378595|ref|ZP_01465748.1| preprotein translocase, SecA subunit [Stigmatella aurantiaca
DW4/3-1]
gi|115364382|gb|EAU63464.1| preprotein translocase, SecA subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 887
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 285/430 (66%), Gaps = 29/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 33 RHYDVQLVGGMFLHEGCIAEMRTGEGKTLTATLPTYLNALSGRGVHVVTVNDYLARRDAE 92
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+RF+G++ G I + ++R+ +YR DITY N+E GFDYLRDN+ + V R
Sbjct: 93 WMGRVYRFMGMTTGCILHELTDKQRQESYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQR 152
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG +Y +V +V YT++ K
Sbjct: 153 ---ELNYAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGMVPDQDYTLDEKG 209
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L ++L+D + V AL+A Y+RD Y+V++G+ +I+
Sbjct: 210 RSVSLTDDGIEKLQKRLSISNLYDPGEIETLHHVEQALRAHTLYKRDKDYVVKDGEVMIV 269
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RRWS+G+HQAVEAKEG+KI+ ++ +A I++Q+ F++Y KLSGMTGTA T
Sbjct: 270 DEFTGRLMPGRRWSDGLHQAVEAKEGVKIENENQTLATISFQNYFRMYSKLSGMTGTADT 329
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN P +R DL + T R K+E A +E+E + + G+PVLVG+
Sbjct: 330 EAEEFAKIYNLDVRVIPTNRPMVRKDLQDLVYKTEREKFEAAAKEIEELNKKGQPVLVGT 389
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE +S LK++G+PHNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 390 VSIAKSEVVSSFLKKRGVPHNVLNA--KQHQREADIVAQAGRKGAVTISTNMAGRGTDIL 447
Query: 398 LGGNPKMLAK 407
LGGN +++ K
Sbjct: 448 LGGNAEVMTK 457
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 26/197 (13%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
+ E +EV LGGL ++GT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ +
Sbjct: 499 DAQTKAERAEVMGLGGLFILGTERHESRRIDNQLRGRAGRQGDPGASRFYLSLEDDLMRI 558
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F + L+ R+ +E IE + R + G Q E + F IRK+L+E+D+V+ Q
Sbjct: 559 FG--SERISGLMERLGMEEGEVIEHAWLSRAIEGAQKRVEGHNFDIRKNLLEYDDVMNQQ 616
Query: 641 RKHVYDLRQSILTGA--------------------NESCSQQIFQYMQ-AVVDEIIFGNV 679
R+ +Y LR+ +L + S F+ M ++++I G
Sbjct: 617 RRTIYKLRRQVLAAGAGLPLVEYDEDKKTRAKIRTERTISWADFKEMVLDALEDVIVGQA 676
Query: 680 D---PLKHPRYWSLDKL 693
D P K+P W L+ L
Sbjct: 677 DTYLPTKNPTTWDLESL 693
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
T+D W+DHL+ M+ L + +R +G ++P +EYK +G FI ML A + V +++
Sbjct: 750 TIDQLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGYSGFIQMLGAIKTQFVSQMMR 808
>gi|392427778|ref|YP_006468772.1| protein translocase subunit secA [Desulfosporosinus acidiphilus
SJ4]
gi|391357741|gb|AFM43440.1| protein translocase subunit secA [Desulfosporosinus acidiphilus
SJ4]
Length = 833
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/422 (49%), Positives = 285/422 (67%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T VVTVNDYLA+RD+E
Sbjct: 78 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGLGVHVVTVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++HRFLGL+VGL+ G+ EERRS+Y DITY N+E GFDYLRDN+ + LV R
Sbjct: 138 WMGQIHRFLGLTVGLVVHGLNYEERRSSYGADITYGTNNEFGFDYLRDNMVTRPDGLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISGEA K Y A V L Y V K
Sbjct: 198 ---DLNYAIVDEVDSILIDEARTPLIISGEADKPTELYFRVAMVIPRLKPEEDYKVIEKE 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ V LTE+G++ E L +L+++ + A V ALKA ++RD Y+V++G+ +I+
Sbjct: 255 HVVTLTEQGVSRVESMLGVENLYEDIHTELAHHVNQALKAHTLFKRDRDYVVKDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F+++ KL+GMTGTA T
Sbjct: 315 DEFTGRLMFGRRYSEGLHQAIEAKEGVKVEKESQTLATITFQNYFRMFKKLAGMTGTAMT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN P IR D P + T +GK+ +++ G+P+LVG+
Sbjct: 375 EEPEFRKIYKLDVVEIPTNKPAIRKDEPDVIYRTEKGKFLAVVEDIIERHSKGQPLLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE+LS +L+++GIPH VLNA KY +EA+ V+QAG+ +TI+TNMAGRGTDII
Sbjct: 435 VSVEKSEHLSAMLERRGIPHQVLNA--KYHEKEAQIVSQAGQLGMVTIATNMAGRGTDII 492
Query: 398 LG 399
LG
Sbjct: 493 LG 494
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 159/338 (47%), Gaps = 67/338 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL+D++ + F +
Sbjct: 494 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFFISLEDDLMRMFGAENIM 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ D+ +PI I R + Q E F IRK ++++D+V+ QR+ +Y
Sbjct: 554 GI--MDKLGMDDSVPIASRMISRSIESAQRRVENRNFDIRKHVLDYDDVMNQQREVIYGQ 611
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+++L G N LK L+K +K IA+
Sbjct: 612 RRAVLMGEN-------------------------LKDNITDMLEKAVKNSIAM------- 639
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
SGD+ +L L + NFY P P LA S +
Sbjct: 640 ----FSGDSPFPEEWDLASLADY-VENFYLPGNHLDPE--------------TLADLSGE 680
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ T L +K +E + M+E+ERAV+++ +D W DHL
Sbjct: 681 EIEELLLDKATELYQK--------------REDEFGADLMREIERAVMLQVVDSKWMDHL 726
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+ L + +R++G ++PL E++ +G F +M+ +
Sbjct: 727 DAMDMLREGIGLRAYGQKDPLVEFRREGFEMFQAMIDS 764
>gi|390935722|ref|YP_006393227.1| protein translocase subunit secA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389571223|gb|AFK87628.1| Protein translocase subunit secA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 894
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 282/432 (65%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I M EER+ Y DITY N+E GFDYLRDN+ E++V
Sbjct: 140 DWMGKIYEFLGLSVGVILHDMDSEERKKAYAADITYGTNNEFGFDYLRDNMVIYKEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L YT++ K
Sbjct: 200 RH---LNYAIVDEVDSILIDEARTPLIISGVGEKSTDLYKRADAFVRTLKNEEDYTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+ AE ++L D EN + + ALKA +RD Y+V++G+ +I
Sbjct: 257 ARAVSLTEKGVEKAEKFFNLDNLADLENIEISHNINQALKAHAIMKRDKDYVVKDGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+K++ +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKVERESKTLATITFQNYFRMYDKLAGMTGTAL 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN IR+D P + T K++ +++ + G+PVLVG
Sbjct: 377 TEEQEFRAIYGLDVVVIPTNKEMIRIDHPDVIYKTEEAKFKAVVEDIVEHHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE LS +LK+ GI H VLNA KY +EAE +AQAGRK A+TI+TNMAGRGTDI
Sbjct: 437 TITIEKSEKLSSMLKKLGIKHQVLNA--KYHEKEAEIIAQAGRKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKK 408
ILGGNP+ LAKK
Sbjct: 495 ILGGNPEFLAKK 506
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 106/168 (63%), Gaps = 12/168 (7%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V +LGGL++IGT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + F + +
Sbjct: 557 VVKLGGLYIIGTERHESRRIDNQLRGRSGRQGDPGESRFYISLEDDLMRLFG--SERIKN 614
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
+++ + ++D PIE + +Q+ Q E F +RK+++E+D+V+ QR+ +Y R+
Sbjct: 615 MMNTLGIEDDQPIEHKILTKQIEQAQKKVEGINFDVRKNVLEYDDVMNKQREIIYKERRK 674
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPL----KHPRYWSLDKLL 694
+L G + + QY+ +V +II NV+ K+P W ++ LL
Sbjct: 675 VLEG------EDLRQYILDMVKDIIRRNVEIYTAGSKYPEEWDIEGLL 716
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+K +D W DH+ M++L + +R++G +P+ EYK G F ++++
Sbjct: 766 MREIERIVLLKVVDTRWMDHIDEMDQLRQGIGLRAYGQVDPVIEYKKIGYDMFEDLVNSI 825
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 826 QEDTVKFL 833
>gi|150388625|ref|YP_001318674.1| preprotein translocase subunit SecA [Alkaliphilus metalliredigens
QYMF]
gi|172052474|sp|A6TLE7.1|SECA1_ALKMQ RecName: Full=Protein translocase subunit SecA 1
gi|149948487|gb|ABR47015.1| preprotein translocase, SecA subunit [Alkaliphilus metalliredigens
QYMF]
Length = 891
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/437 (48%), Positives = 288/437 (65%), Gaps = 29/437 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQI G +LH G I+EMKT VVTVNDYLAQRD
Sbjct: 80 MKHYRVQIYGAIILHQGRISEMKTGEGKTLMATLPVYLNALAGKGVHVVTVNDYLAQRDC 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLSVG+I G+ E+RR+ Y D+TY N+E GFDYLRDN+ + +V
Sbjct: 140 EWMGKLYEFLGLSVGVIVHGITIEQRRAAYNADVTYGTNNEFGFDYLRDNMVIYQKDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG+ K Y + + + L +++ K
Sbjct: 200 REQ---NYAIVDEVDSILIDEARTPLIISGQGEKSTKLYHIVDQFVKTLKIEDDVSLDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
NSV LTE+G AE A +L D N+ + + ALKA+ R D Y+V++G+ +I
Sbjct: 257 ANSVTLTEDGGTKAEKAFGIENLADMNNMELSHHINQALKARNLMRLDKDYVVKDGEIII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ RR+S+G+HQA+EAKEGL+IQ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDDFTGRLMFGRRYSDGLHQAIEAKEGLQIQRESKTLATITFQNYFRMYRKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF ++ M V+E+PTN +R D + +GK+E +++E ++ G+PVLVG
Sbjct: 377 TEEDEFRAIYNMDVVEIPTNRVIVRDDQADGVYKGEQGKFEALAKDIEGRYKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE L+ LLK++GIP VLNA K+ REAE VAQAGRK ITI+TNMAGRGTDI
Sbjct: 437 TISIEKSEELATLLKRKGIPCEVLNA--KHHEREAEIVAQAGRKGIITIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKIIEDR 413
ILGGNP+ LAK+ ++ R
Sbjct: 495 ILGGNPEFLAKREMKKR 511
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 4/178 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L+ + E +V GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S
Sbjct: 539 YNDLLEKFKKETEQEHKDVIEAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSKFYIS 598
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D ++ + ++ ++D IE + R + Q E FGIRK +++
Sbjct: 599 LEDDLMRLFGGDKMLSI--VEKMGLEDDEAIEHGMLSRSIENAQKKVEGRNFGIRKHVLQ 656
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+D+V+ QR+ +Y R+ +L G ES + + +++E + K+P W L
Sbjct: 657 YDDVMNKQREVIYGERKKVLAG--ESLKDHVLNMARNIINEAVAIYTADAKYPEEWDL 712
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 44/68 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER ++++ +D W DH+ M++L + +R+ G +P+ Y+++G F +M+++
Sbjct: 766 MRELERIIVLQVIDTKWMDHIDAMDQLRQGIGLRAIGQIDPVRAYQVEGFDMFNAMINSI 825
Query: 867 RRLTVESL 874
+ TV+ L
Sbjct: 826 QEDTVKYL 833
>gi|429732013|ref|ZP_19266633.1| preprotein translocase, SecA subunit [Corynebacterium durum F0235]
gi|429144248|gb|EKX87367.1| preprotein translocase, SecA subunit [Corynebacterium durum F0235]
Length = 844
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 287/429 (66%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RD+E
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL+ +I M P+ERR Y DITY N+ELGFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHRFLGLTTDVILADMTPQERRDAYNADITYGTNNELGFDYLRDNMARSIDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P ++AIVDEVDS+LIDE R PL+ISG A Y V A++ + + +HY V+ +
Sbjct: 200 ---PHNYAIVDEVDSILIDEARTPLIISGPADGSSQWYTVFAQIVPRMTRDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ E+ ++ NA+KA+E + RD YI+R G+ LI+
Sbjct: 257 RTVGVKEEGVNFVEDQLGIENLYAPEHSQLVSYLNNAIKAEELFTRDKDYIIRGGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRVLAGRRYNEGMHQAIEAKEGVEIKNENQTLATITLQNYFRLYNKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN PN R DL + T K+ ++ +PVLVG+
Sbjct: 377 EAAELHQIYKLDVVTIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIVERVAKNQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EAE VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQRRGVKHHVLNA--KHHEQEAEIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP +LA
Sbjct: 495 LGGNPDILA 503
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 74/367 (20%)
Query: 519 DCEVHCSNEGSE-----VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
D E++ + SE V++ GGL+V+GT HESRRIDNQLRGR+GRQGDPG+TRF +S+
Sbjct: 526 DAEINRMRKRSEKYAERVRKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGATRFYLSM 585
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+DE+ +F T ++++R+ +D+PIE + + G Q E F +RK+++++
Sbjct: 586 RDELMVRFVGAT--MENMMNRLNVPDDVPIEAKIVTNSIKGAQTQVENQNFEVRKNVLKY 643
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEV+ QRK +Y R+ IL G + + ++++++E + V Y W L
Sbjct: 644 DEVMNEQRKVIYAERREILEG------RDVANQVESMIEETVAAYVAGATADGYVEDWDL 697
Query: 691 DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFP-DLPKPPNLFRG 749
D+ L + G+ G T+ + E L +D + F P +LP
Sbjct: 698 DE------------LWNALNGLYGPTM--TWESL-----LDGSEFGEPGELP-------- 730
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE--SRYDDVYM 807
+ LR L + +A Y + ++ S D M
Sbjct: 731 ----------------------------ADELRDALIEDALAQYKELEEQVASIGGDAQM 762
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+E+ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M +
Sbjct: 763 REIERMVILGVVDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGIK 822
Query: 868 RLTVESL 874
TV L
Sbjct: 823 EETVRQL 829
>gi|402833869|ref|ZP_10882478.1| SecA cross-linking domain protein [Selenomonas sp. CM52]
gi|402279599|gb|EJU28383.1| SecA cross-linking domain protein [Selenomonas sp. CM52]
Length = 842
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 80 MRHFDVQMIGGICLHEGKIAEMRTGEGKTLVATLPVYLNALEGKGVHMVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RV+RFLGLSVGLI M ER+ Y D+T+ N+E GFDYLRDN+ + +Q+V
Sbjct: 140 EWMGRVYRFLGLSVGLIAHDMDFPERKLAYASDVTFGTNNEFGFDYLRDNMVIHPQQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+L+DE R PL+ISG K Y V A+ L +G Y ++ K
Sbjct: 200 R---DLHYAIVDEVDSILVDEARTPLIISGPGQKSTDMYAVMARAVAQLKEGEDYKLDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V ++E + E + +L+ EN + AL+AK +RD Y+VR+ + +I
Sbjct: 257 QKTVAPSDEAVLKVERIVGIKNLYAPENLELSHCFTAALRAKALMKRDRDYVVRDDEIII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL GMTGTAK
Sbjct: 317 VDEFTGRLMVGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLGGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PV+ VPTN P RVD P + T R K+ Q VE + + G+P+L+G
Sbjct: 377 TEEDEFLKIYKLPVVVVPTNRPVQRVDEPDAIYKTKRAKYRAVGQAVEEIHKTGQPILIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LS +LK+ G+ HNVLNA KY +EAE + AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEELSAILKKHGVEHNVLNA--KYHEKEAEIIKDAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 QLG 497
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 166/338 (49%), Gaps = 67/338 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGRAGRQGDPG ++F +SL+D++ + F+ D
Sbjct: 497 GDGVQELGGLYILGTERHESRRIDNQLRGRAGRQGDPGRSKFYLSLEDDLLRLFASDNIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + R+ DE+ PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 SI--MDRLGMDENDPIEHKLITRSIERAQKKVEARNFDIRKHVLEYDDVMNQQREVIYAE 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL G E + IF + +++ + + +P W+L L++
Sbjct: 615 RRKILRG--EDLKENIFFMLDKIIESEMDQYANAKLYPEEWTLAGLIE------------ 660
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
D Y P+ + K L+ A+ D+
Sbjct: 661 -----------------------DAEKIYAPEG----------KLKKEELE---AMSRDE 684
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L + LRK D A +E + + M+E+E+ V+++ +D W +HL
Sbjct: 685 LEET---------LRKTAHDAYAA------REQLFGEENMRELEKVVMLRVVDNHWMEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+ L +N+R++G RNPL EYKI+ F +M +A
Sbjct: 730 DRMDMLREGINLRAYGQRNPLVEYKIEALDMFEAMEAA 767
>gi|374997884|ref|YP_004973383.1| Preprotein translocase subunit SecA [Desulfosporosinus orientis DSM
765]
gi|357216250|gb|AET70868.1| preprotein translocase, SecA subunit [Desulfosporosinus orientis
DSM 765]
Length = 834
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/422 (49%), Positives = 281/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T V+TVNDYLA+RD+E
Sbjct: 78 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGKGVHVITVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+H+FLGLSVGL+ G+ EER+++Y DI Y N+E GFDYLRDN+ + LV R
Sbjct: 138 WMGRIHKFLGLSVGLVVHGLNYEERKNSYASDIVYGTNNEFGFDYLRDNMVTRPDGLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A V L Y V K
Sbjct: 198 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYFRVAMVIPRLKPEEDYKVVEKE 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE G++ E L ++L+++ + A V ALKA ++RD Y+V++G+ +I+
Sbjct: 255 RVVTLTENGVSRVESMLGVDNLYEDIHTELAHHVNQALKAHTLFKRDRDYVVKDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KLSGMTGTA T
Sbjct: 315 DEFTGRLMFGRRYSEGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYEKLSGMTGTAMT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN P +RVD P + T GK+ + + +P+LVG+
Sbjct: 375 EEPEFRKIYKLDVVEIPTNKPLLRVDEPDVVYRTEEGKFLAVVERIIERHSKSQPLLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE+LS +L+++G+PH VLNA K+ +EAE VAQAG+ +TI+TNMAGRGTDII
Sbjct: 435 VSVEKSEHLSKMLERRGVPHQVLNA--KFHEKEAEIVAQAGQPGMVTIATNMAGRGTDII 492
Query: 398 LG 399
LG
Sbjct: 493 LG 494
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 166/352 (47%), Gaps = 75/352 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL+D++ + F D
Sbjct: 494 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFFISLEDDLMRLFGADNIM 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ D+ +PI I R + Q E F IRK ++++D+V+ QR+ +Y
Sbjct: 554 GI--MDKLGMDDSVPITSKMISRSIETAQRRVENRNFDIRKHVLDYDDVMNQQREVIYSQ 611
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEII--FGNVDPLKHPRYWSLDKLLKEFIAIAGKIL 705
R+++L G N I + V I F P P W L+ L A +
Sbjct: 612 RRAVLMGEN--LHDNIMDMLARTVSNSISMFSGESPF--PEEWDLESL-------ADYVE 660
Query: 706 DDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
D GI S EEL +L++ +I L K +++ R A S
Sbjct: 661 DFFLPGIH-----LSPEELADLSAEEIEELL---LDKVKEIYK---------SREEAFGS 703
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
D M+EVERAV+++ +D W D
Sbjct: 704 D---------------------------------------LMREVERAVMLQVVDSKWMD 724
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
HL +M+ L + +R++G ++PL EYK +G F +M+ + + E +++Y
Sbjct: 725 HLDSMDMLREGIGLRAYGQKDPLVEYKREGYEMFQAMIDSIQ----EDIIRY 772
>gi|374583719|ref|ZP_09656813.1| preprotein translocase, SecA subunit [Desulfosporosinus youngiae
DSM 17734]
gi|374419801|gb|EHQ92236.1| preprotein translocase, SecA subunit [Desulfosporosinus youngiae
DSM 17734]
Length = 835
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 280/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHD IAEM+T V+TVNDYLA+RD+E
Sbjct: 78 RHYDVQLIGGMVLHDSRIAEMRTGEGKTLVATLPAYLNALTGKGVHVITVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+H+FLGLSVGL+ G+ EERR++Y DI Y N+E GFDYLRDN+ E LV R
Sbjct: 138 WMGRIHKFLGLSVGLVVHGLNYEERRNSYASDIVYGTNNEFGFDYLRDNMVTRPEALVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A + L Y V K
Sbjct: 198 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYFRVAMIIPRLKPEEDYKVIEKE 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L ++L+++ + A V ALKA ++RD Y+V++G+ +I+
Sbjct: 255 RVVTLTEKGVSRVESMLGVDNLYEDIHTELAHHVNQALKAHTLFKRDRDYVVKDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KLSGMTGTA T
Sbjct: 315 DEFTGRLMFGRRYSEGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYDKLSGMTGTAMT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN P +R D P + T GK+ + G+P+LVG+
Sbjct: 375 EEPEFRKIYKLDVVEIPTNKPLLRKDEPDVIYRTEEGKFLAVVDSIIEKHAKGQPLLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE+LS LL+++G+PH VLNA K+ +EAE VAQAG+ +TI+TNMAGRGTDII
Sbjct: 435 VSVEKSEHLSKLLERRGVPHQVLNA--KFHEKEAEIVAQAGQHGMVTIATNMAGRGTDII 492
Query: 398 LG 399
LG
Sbjct: 493 LG 494
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 155/342 (45%), Gaps = 75/342 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G + +GGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL+D++ + F +
Sbjct: 494 GEGIAEIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFFISLEDDLMRLFGAENIM 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + ++ D+ +PI I R + Q E F I RKHV D
Sbjct: 554 GV--MDKLGMDDSIPITSKMISRSIETAQRRVENRNFDI--------------RKHVLDY 597
Query: 648 RQSILTGANESCSQQ---IFQYMQAVV-DEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
++ +QQ I+ +AV+ E ++ N+ + L+K K I +
Sbjct: 598 --------DDVMNQQREVIYAQRRAVLMGENLYDNIMDM-------LEKAAKNSITM--- 639
Query: 704 ILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
SG++ +L L + F+ P + P + + ++ L
Sbjct: 640 --------FSGESTFPEEWDLASLADY-VEGFFLPGIHLSPEELADL--SAEEIEEMLID 688
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+ +L K+ +E + M+EVERAV+++ +D W
Sbjct: 689 KAKELYKS--------------------------REEMFGADLMREVERAVMLQVVDSKW 722
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
DHL M+ L + +R++G +NPL EY+ +G F M+ +
Sbjct: 723 MDHLDAMDMLRDGIGLRAYGQKNPLVEYRREGFEMFQGMIES 764
>gi|254233853|ref|ZP_04927178.1| preprotein translocase secA1 1 subunit [Mycobacterium tuberculosis
C]
gi|124599382|gb|EAY58486.1| preprotein translocase secA1 1 subunit [Mycobacterium tuberculosis
C]
Length = 965
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 97 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 156
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM VHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 157 WMGFVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 216
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 217 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 273
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 274 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 333
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 334 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 393
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 394 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 453
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 454 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 511
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 512 LGGNVDFLTDQRLRERGL 529
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 65/352 (18%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 553 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 610
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 611 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 670
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAI 700
+Y R+ IL G E+ Q ++ V+ + G + W LD L LK +
Sbjct: 671 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPV 727
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
GI+ D+L RK +R
Sbjct: 728 ----------GITADSLT---------------------------------RKDHEFER- 743
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTL 819
DDLT+ LL L D A + E + M+++ER VL+ +
Sbjct: 744 -----DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVI 791
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
D WR+HL M+ L + +R+ R+PL EY+ +G F++ML + +V
Sbjct: 792 DRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 843
>gi|224369759|ref|YP_002603923.1| protein SecA [Desulfobacterium autotrophicum HRM2]
gi|259509633|sp|C0QI23.1|SECA_DESAH RecName: Full=Protein translocase subunit SecA
gi|223692476|gb|ACN15759.1| SecA [Desulfobacterium autotrophicum HRM2]
Length = 840
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 280/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFD Q+IGG LH G IAEMKT +VTVNDYLA+RDA
Sbjct: 81 MRHFDAQLIGGIALHQGIIAEMKTGEGKTLAATLPAYLNALSGKGVHIVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FL LSVG+I + EER+ Y DITY N+E GFDYLRDN+ + E L
Sbjct: 141 EWMSTIYNFLNLSVGIIVHDLNDEERKKAYASDITYGTNNEFGFDYLRDNMKFDRESLAQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
K +FAIVDEVDS+LIDE R PL+ISG A K Y + + +HY V+ K
Sbjct: 201 ---KELNFAIVDEVDSILIDEARTPLIISGPAEKSTTLYAQTDTIISAFKKDIHYNVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
S LTEEG+AL E L +L+D ++ +N A+KA ++RDV YIV+N + +I
Sbjct: 258 AKSSTLTEEGVALGEQLLGVENLYDPSNIEILHHLNQAIKAHTLFKRDVDYIVKNDEVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KI ++ +A +T+Q+ F++Y KLSGMTGTA+
Sbjct: 318 VDEFTGRLMTGRRYSEGLHQALEAKEGVKIANENQTLASVTFQNFFRMYKKLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ +PT+ P +R D P + T + K++ A QE+ S+ + G+PVLVG
Sbjct: 378 TEAAEFKKIYDLDVLVIPTHKPMVRKDFPDLIYKTQKEKYQAAIQEIISLHKKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +++ SE +SD LK++GIPH VLNA K+ EAE VA AG++ A+TISTNMAGRGTDI
Sbjct: 438 TIAIDVSEDISDKLKKRGIPHTVLNA--KHHKAEAEIVANAGQRGAVTISTNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LG K L
Sbjct: 496 VLGEGVKELG 505
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 11/207 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH++GTS HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 498 GEGVKELGGLHILGTSRHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLLRIFGGDRIT 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A+ ++++ DE PIE I R + Q E + F IRK L+E+D+V+ QR+ +Y
Sbjct: 558 AI--MNKLGIDEGEPIEHGLISRAIENAQSKVEGHNFEIRKQLIEYDDVMNQQREVIYRQ 615
Query: 648 RQSILTGANESCSQQIFQYM---QAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKI 704
R+ ILT ++ S +F+ M QA ++ N +HP W L+ LK+ + +
Sbjct: 616 RRQILTDSDLST---LFKDMIQDQAWQIHAMYKN--DKQHPMEWDLEG-LKDTVKKQFNL 669
Query: 705 LDDLFAGISGDTLLKSIEELPELNSID 731
DL + D ++ EL E +ID
Sbjct: 670 EIDLSPAVCEDIDADALGELIETTAID 696
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 785 LGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
LG+++ + ++ +ES + + +ER ++++T+D W+DHL+NM+ L + +R +
Sbjct: 686 LGELIETTAIDAYKAKESLLGPIDTQRLERYIMLQTVDSLWKDHLLNMDHLKEGIGLRGY 745
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYW------SSPME 883
+NPL YK +G F ++ R+ E+L ++ S P+E
Sbjct: 746 AQQNPLILYKKEGYEMFEGLVE---RIKEETLGIFFRIQIAESEPLE 789
>gi|183981327|ref|YP_001849618.1| preprotein translocase subunit SecA [Mycobacterium marinum M]
gi|183174653|gb|ACC39763.1| preprotein translocase SecA1 1 subunit [Mycobacterium marinum M]
Length = 950
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 285/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F+VQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 78 RPFEVQLMGAAALHLGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHIVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M PEERR Y DITY N+E GFDYLRDN+A + V R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPEERRVAYNADITYGTNNEFGFDYLRDNMAHTLDDCVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGSSNWYTEFARLAPLMEKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYNKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRPMVREDQSDLIYKTEEAKYIAVVDDVAERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEAGIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L K + D L
Sbjct: 493 LGGNVDFLTDKRLRDNGL 510
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 24/208 (11%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + +E +EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 527 LPKVKEEAGDEATEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 586
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++ F+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV
Sbjct: 587 LMRR--FNGAALESLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEV 644
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+ QRK +Y R+ IL G N + Q + ++ ++I VD Y W LD L
Sbjct: 645 MNQQRKVIYAERRRILEGEN------LQQQAKDMLTDVITAYVDGATVEGYAEDWDLDAL 698
Query: 694 ---LKEFIAIAGKILDDLFAGISGDTLL 718
LK + GI DTL+
Sbjct: 699 WTALKTLYPV----------GIKADTLM 716
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|149918450|ref|ZP_01906940.1| preprotein translocase ATPase subunit [Plesiocystis pacifica SIR-1]
gi|149820750|gb|EDM80160.1| preprotein translocase ATPase subunit [Plesiocystis pacifica SIR-1]
Length = 1064
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/431 (48%), Positives = 277/431 (64%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG +H G + EM+T ++TVNDYLA RDA
Sbjct: 81 MRHYDVQMIGGIAMHRGMVLEMRTGEGKTLTATSALYLNALTGRGAHLITVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ +LGLSVG I GM ER+ YR DITY N+E GFDYLRDN+ E+ V
Sbjct: 141 EWMGEIYNYLGLSVGTIVNGMFHRERQKAYRADITYGTNNEFGFDYLRDNMKETIEKYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISGE++K A Y K L + L Y V+ K
Sbjct: 201 R---ELHYAIVDEVDSILIDEARTPLIISGESAKPAALYKTVDKAIPSLRRDLDYVVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V+LT+ G+ E L ++L+ EN V AL+A Y+RDV+Y+V G+ +I
Sbjct: 258 AGTVQLTDAGVDRVERLLGCDNLYARENVSLKHHVDQALRAHVLYKRDVKYLVEGGEIVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR RRWS+G+HQA+EAKE + IQ +S +A ITYQ+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRKMSGRRWSDGLHQAIEAKENVPIQPESQTLATITYQNYFRMYEKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + I VPTN P R D+ + +GK+ +++ G+PVLVG
Sbjct: 378 TEAEEFHKIYNLECIVVPTNRPIARDDMDDVVYKNEKGKFRAVVEQIRECHERGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSV+ S+ + LL + IPH+VLNA K REA VAQAGRK+A+T++TNMAGRGTDI
Sbjct: 438 TTSVDKSQVIHALLDRAKIPHSVLNA--KQHQREAYVVAQAGRKHAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAK 407
ILGGNP+M+AK
Sbjct: 496 ILGGNPEMMAK 506
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ E EV LGGL ++GT HESRRIDNQLRGRAGRQGDPG +RF +SL+D++ + F
Sbjct: 529 CAAEKKEVLALGGLFILGTERHESRRIDNQLRGRAGRQGDPGGSRFFLSLEDDLMRIFGA 588
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D L+ R+ +ED+PIE + + + G Q E +F RK+L E+D V+ QRK
Sbjct: 589 DR--ITGLMERLGMEEDVPIEAPMVNKSIEGAQEKVEAMHFDTRKNLFEYDNVMNEQRKA 646
Query: 644 VYDLRQSILTG 654
+Y LR+ IL G
Sbjct: 647 IYALRRQILEG 657
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R + ++ +D W HL N+ L + + +R + +R+P YK++G + F M + + +
Sbjct: 860 RRIYLREIDEQWIAHLKNIEDLRAGIGLRGYANRDPKNTYKVEGFKLFRDMWESISQTVL 919
Query: 872 ESLVQ 876
+ ++Q
Sbjct: 920 DDVLQ 924
>gi|443489785|ref|YP_007367932.1| preprotein translocase SecA1 1 subunit [Mycobacterium liflandii
128FXT]
gi|442582282|gb|AGC61425.1| preprotein translocase SecA1 1 subunit [Mycobacterium liflandii
128FXT]
Length = 950
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 285/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F+VQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 78 RPFEVQLMGAAALHLGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHIVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M PEERR Y DITY N+E GFDYLRDN+A + V R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPEERRVAYNADITYGTNNEFGFDYLRDNMAHTLDDCVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGSSNWYTEFARLAPLMEKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYNKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRPMVREDQSDLIYKTEEAKYIAVVDDVAERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEAGIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L K + D L
Sbjct: 493 LGGNVDFLTDKRLRDNGL 510
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 24/208 (11%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + +E +EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 527 LPKVKEEAGDEATEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 586
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++ F+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV
Sbjct: 587 LMRR--FNGAALESLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEV 644
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+ QRK +Y R+ IL G N + Q + ++ ++I VD Y W LD L
Sbjct: 645 MNQQRKVIYAERRRILEGEN------LQQQAKDMLTDVITAYVDGATVEGYAEDWDLDAL 698
Query: 694 ---LKEFIAIAGKILDDLFAGISGDTLL 718
LK + GI DTL+
Sbjct: 699 WTALKTLYPV----------GIKTDTLM 716
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|329120960|ref|ZP_08249591.1| preprotein translocase subunit SecA [Dialister micraerophilus DSM
19965]
gi|327471122|gb|EGF16576.1| preprotein translocase subunit SecA [Dialister micraerophilus DSM
19965]
Length = 813
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 286/435 (65%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFD Q+IGG VLH G+IAEM T V+TVNDYLA+RD+
Sbjct: 82 MRHFDTQLIGGIVLHRGNIAEMSTGEGKTLVATAPVYLNALAGKGVHVITVNDYLAKRDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V++FLGLSVGLI + +R+ Y DITY N+E GFDYLRDN+ + Q+V
Sbjct: 142 EWMGQVYKFLGLSVGLIIHDLDFNQRKIAYNSDITYGTNNEFGFDYLRDNMVVSLNQMVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HF ++DEVDS+LIDE R PL+ISG K Y V AK+ L YT++ K
Sbjct: 202 R---PLHFCLIDEVDSILIDEARTPLIISGPGQKSTDNYYVLAKLVPKLKAEEDYTIDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE+G+A E L +L+D EN + AL+A+ +D Y+V++ + +I
Sbjct: 259 QKTVAPTEKGVAKMEKLLNVENLYDPENIELNHLFVQALRAQTMMIKDRDYVVKDNEVII 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL++ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 319 VDEFTGRLMYGRRYSDGLHQAIEAKEGLQVARESQTLATITFQNYFRMYSKLAGMTGTAK 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ +PV+++PTN P R DLP + T +GK++ +E++ G+P+L+G
Sbjct: 379 TEEQEFIKIYGLPVLQIPTNKPIQRKDLPDVVYKTQKGKYKAVVREIQRRHATGQPMLIG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK G+ HNVLNA KY +EA VAQAG+K +TI+TNMAGRGTDI
Sbjct: 439 TTSIEQSEQLSHMLKNAGVVHNVLNA--KYHEKEAMIVAQAGQKGQVTIATNMAGRGTDI 496
Query: 397 ILG-GNPKMLAKKII 410
LG G P++ II
Sbjct: 497 TLGEGVPELGGLAII 511
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 499 GEGVPELGGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRIFGGDN-- 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ ++D I+ + + Q E F IRK ++E+D+V+ QRK +Y+
Sbjct: 557 IKNFMDKMGLEDDEEIKSKMVSNAIRKAQKRVENRNFDIRKYVLEYDDVMNQQRKVIYEQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK---EFIAIAGKI 704
R +L G E+ +QI + ++ + + VDP +P W ++L+K ++ I G+I
Sbjct: 617 RHKVLIG--ENLKEQILAMIDGLISDAMNIYVDPKVYPEEWDFEELIKYCEKYFLIPGEI 674
Query: 705 LDDLFAGISGDTLLKSIEEL 724
+ +S + + K++ E
Sbjct: 675 TVEQAENLSREDVEKTLIEF 694
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E+AV++K +D W +HL +M+ L + +RS+G RNP+ EYK++ F M A
Sbjct: 711 MRELEKAVMLKVIDSKWMEHLDDMDMLKEGIGLRSYGQRNPIIEYKVEAFDMFEEMQHA- 769
Query: 867 RRLTVESLVQY 877
VE ++ Y
Sbjct: 770 ---MVEMIIMY 777
>gi|313892006|ref|ZP_07825607.1| preprotein translocase, SecA subunit [Dialister microaerophilus
UPII 345-E]
gi|313119649|gb|EFR42840.1| preprotein translocase, SecA subunit [Dialister microaerophilus
UPII 345-E]
Length = 813
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 286/435 (65%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFD Q+IGG VLH G+IAEM T V+TVNDYLA+RD+
Sbjct: 82 MRHFDTQLIGGIVLHRGNIAEMSTGEGKTLVATAPVYLNALAGKGVHVITVNDYLAKRDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V++FLGLSVGLI + +R+ Y DITY N+E GFDYLRDN+ + Q+V
Sbjct: 142 EWMGQVYKFLGLSVGLIIHDLDFNQRKIAYNSDITYGTNNEFGFDYLRDNMVVSLNQMVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HF ++DEVDS+LIDE R PL+ISG K Y V AK+ L YT++ K
Sbjct: 202 R---PLHFCLIDEVDSILIDEARTPLIISGPGQKSTDNYYVLAKLVPKLKAEEDYTIDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE+G+A E L +L+D EN + AL+A+ +D Y+V++ + +I
Sbjct: 259 QKTVAPTEKGVAKMEKLLNVENLYDPENIELNHLFVQALRAQTMMIKDRDYVVKDNEVII 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL++ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 319 VDEFTGRLMYGRRYSDGLHQAIEAKEGLQVARESQTLATITFQNYFRMYSKLAGMTGTAK 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ +PV+++PTN P R DLP + T +GK++ +E++ G+P+L+G
Sbjct: 379 TEEQEFIKIYGLPVLQIPTNKPIQRKDLPDVVYKTQKGKYKAVVREIQRRHATGQPMLIG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK G+ HNVLNA KY +EA VAQAG+K +TI+TNMAGRGTDI
Sbjct: 439 TTSIEQSEQLSHMLKNAGVVHNVLNA--KYHEKEAMIVAQAGQKGQVTIATNMAGRGTDI 496
Query: 397 ILG-GNPKMLAKKII 410
LG G P++ II
Sbjct: 497 TLGEGVPELGGLAII 511
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 499 GEGVPELGGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRIFGGDN-- 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ ++D I+ + + Q E F IRK ++E+D+V+ QRK +Y+
Sbjct: 557 IKNFMDKMGLEDDEEIKSKMVSNAIRKAQKRVENRNFDIRKYVLEYDDVMNQQRKVIYEQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK---EFIAIAGKI 704
R +L G E+ +QI + ++ + + VDP +P W ++L+K ++ I G+I
Sbjct: 617 RHKVLIG--ENLKEQILAMIDGLISDAMNIYVDPKVYPEEWDFEELIKYCEKYFLIPGEI 674
Query: 705 LDDLFAGISGDTLLKSIEEL 724
+ +S + + K++ E
Sbjct: 675 TVEQAENLSREDVEKTLIEF 694
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E+AV++K +D W +HL +M+ L + +RS+G RNP+ EYK++ F M A
Sbjct: 711 MRELEKAVMLKVIDSKWMEHLDDMDMLKEGIGLRSYGQRNPIIEYKVEAFDMFEEMQHA- 769
Query: 867 RRLTVESLVQY 877
VE ++ Y
Sbjct: 770 ---MVEMIIMY 777
>gi|320532552|ref|ZP_08033359.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
171 str. F0337]
gi|320135223|gb|EFW27364.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
171 str. F0337]
Length = 939
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/433 (50%), Positives = 281/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 DLMGRVHRFLGLTTGCILVGQTPAERREQYDCDITYGTNNEFGFDYLRDNMAQRPEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG AS DV + Y A ++E L G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPASGDVNKWYKEFATISERLRAGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 256 KKRTVGVLSAGIERVEDYLGVDNLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + T K + ++ +G+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIREDQPDLVYTTVEAKLDAVVDDIAERHEVGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L++QGIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEILSERLREQGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 171/353 (48%), Gaps = 57/353 (16%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + F+
Sbjct: 539 CRAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMRMFA- 597
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ A ++S +D+P+E + R + G Q E + IRK+++++D+V+ QR+
Sbjct: 598 -SGLAQRIMSSGAYPDDVPLESKMVTRGIAGAQRQVESRNYEIRKNVLKYDDVMTEQREK 656
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI--A 701
VY R+ +L G + + F+ QAV + G + P W LD L E +
Sbjct: 657 VYSERRRVLDGEDLEPQIEAFR-TQAVTSIVEAGTAE--GRPDEWDLDALWGELGRLYPV 713
Query: 702 GKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL 761
G D++ + G +L S E L E S D+ Y
Sbjct: 714 GLTQDEVVEALGGKDVLTS-ERLIEELSEDVAVAY------------------------- 747
Query: 762 AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDC 821
++ R N L +++ + +E M+ +ER +L+ +D
Sbjct: 748 --------EDAEARIEANAL----------AHVQLGEEP------MRTLERRILLAVVDK 783
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
WR+HL M+ L + +R+ R+PL EY +G R F +M+ R TVE +
Sbjct: 784 RWREHLYEMDYLKEGIGLRAMAQRDPLVEYANEGARMFRAMMEGIREETVEQI 836
>gi|400535776|ref|ZP_10799312.1| preprotein translocase subunit SecA [Mycobacterium colombiense CECT
3035]
gi|400330819|gb|EJO88316.1| preprotein translocase subunit SecA [Mycobacterium colombiense CECT
3035]
Length = 942
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++GGA LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 78 RPFDVQLMGGAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHIVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMQKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRADQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ +PHNVLNA K+ +EA VA AGR+ IT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRVPHNVLNA--KFHEQEATIVAVAGRRGGITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNADFLTDQRLRERGL 510
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 4/161 (2%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + S E +EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 527 LPKVKEEVSAEAAEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 586
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++F+ A +++R+ +D+PIE + R + Q E+ F +RK+++++DEV
Sbjct: 587 LMRRFNGAALEA--MLNRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEV 644
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG 677
+ QRK +Y R+ IL G E+ +Q ++ VV + G
Sbjct: 645 MNQQRKVIYAERRRILEG--ENLKEQALDMVRDVVTAYVNG 683
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+E+ E
Sbjct: 820 KEESVGFLFNVTVEAVPSPQVAPVEAPE 847
>gi|305679694|ref|ZP_07402504.1| preprotein translocase, SecA subunit [Corynebacterium matruchotii
ATCC 14266]
gi|305660314|gb|EFM49811.1| preprotein translocase, SecA subunit [Corynebacterium matruchotii
ATCC 14266]
Length = 852
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G +AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGAALHFGGVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M PEER++ Y DITY N+ELGFDYLRDN+ + +LV R
Sbjct: 140 WMGRVHRFLGLKVGVILSNMTPEERKTAYDADITYGTNNELGFDYLRDNMVHSLSELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A +A + +G+HY V+ +
Sbjct: 200 G---HHYAIVDEVDSILIDEARTPLIISGPADGPSQLYTTFAALAPRMREGIHYEVDHRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ EN ++ NA+KAKE + +D YIV G+ LI+
Sbjct: 257 RTVGVKEEGVEFVENQLGIENLYAPENSQLVSYLNNAIKAKELFTKDKDYIVSKGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV E RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLEGRRYNEGMHQAIEAKEGVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN RVD+ + T K+ Q++ G+PVLVG+
Sbjct: 377 EAAELHQIYKLDVMPIPTNKKPQRVDMTDLVYKTQEAKFAAVVQDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++ I HNVLNA K+ +EA+ +A+AG +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSKLLQRRHIKHNVLNA--KFHEQEAQIIARAGLPGQVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 63/346 (18%)
Query: 532 KRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDL 591
++ GGL+V+GT HESRRIDNQLRGR+GRQGDPG TRF +S++D++ +F T ++
Sbjct: 544 RKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGLTRFYLSMRDDLMVRFVGQTME--NM 601
Query: 592 ISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSI 651
++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK +Y R+ I
Sbjct: 602 MNRLNVPDDVPIEAKMVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKVIYRERREI 661
Query: 652 LTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILDDL 708
L A+ + + +QA++DE I V Y W L+ L + G +
Sbjct: 662 LESADIAAN------IQAMIDETITAYVRGATMNGYVEDWDLESLWHALETLYGPSM--- 712
Query: 709 FAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDL 768
++EEL ID F +L + + + L + +
Sbjct: 713 -----------TVEEL-----IDGTQFGAAGELSADDLLEAVLLDAHTQYEQL---EEAV 753
Query: 769 TKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLI 828
T G NL R+ + IL + +E Y+ Y+KE
Sbjct: 754 TLIGGEAQMRNLERQVILPILDQKW----REHLYEMDYLKE------------------- 790
Query: 829 NMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 791 -------GIGLRAMAQRDPLVEYQKEGGEMFDAMKDAIKEETVRQL 829
>gi|304407677|ref|ZP_07389328.1| preprotein translocase, SecA subunit [Paenibacillus curdlanolyticus
YK9]
gi|304343160|gb|EFM09003.1| preprotein translocase, SecA subunit [Paenibacillus curdlanolyticus
YK9]
Length = 836
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 284/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEMKT V+TVNDYLAQRD+
Sbjct: 80 MRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVGTLPVYLNALLGRGVHVITVNDYLAQRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +V+ FLGL+VG G+ E++ Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 QLMGQVYEFLGLTVGCNLHGLTHAEKQEAYACDITYGTNNEYGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAI+DEVDS+LIDE R PL+ISG+A+K Y A + + Q +T+++K
Sbjct: 200 R---PLYFAIIDEVDSILIDEARTPLIISGQAAKSTEMYFAADRFVSRMKQDEDFTIDIK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPW-ARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE G+ AE A ++L+D + ALKA RRDV Y+V++ + +I
Sbjct: 257 LRNVTLTEAGVEKAERAFGIDNLYDHAHVLLNHHIQQALKATFIMRRDVDYVVQDDEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE +K+Q +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMAGRRYSDGLHQAIEAKEQIKVQNESMTLATITFQNYFRMYRKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ + V+++PTN NIR D P + + GK++ +E+ +PVLVG
Sbjct: 377 TEEEEFKKIYGLEVVQIPTNRTNIRQDSPDVVYKSENGKFKAVVEEIVKRHANNQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE +S++LK++GI H VLNA KY A EAE +++AG+ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIENSERVSEMLKKRGITHKVLNA--KYHAEEAEIISRAGQAGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 LLG 497
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F +
Sbjct: 497 GEEVPETGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLEDELMRRFGAENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ DED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 557 G--MMERLGFDEDQPIESRMISRAVESAQKRVEGNNFDMRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L +E+ Q ++ VV+ I+ + + P W L ++
Sbjct: 615 RREVL--ESENIRQIATDMIKPVVERIVEAHCEG-DIPEEWDLQAIV 658
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E E+ V+++ +D W DH+ M++L +++R++G +PL EY+ +G F M+
Sbjct: 708 MREFEKVVVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFKEMIENI 767
Query: 867 RRLTVESLVQ-YWSSPMESQEL 887
+ + +++ + + +E QE+
Sbjct: 768 QEEITKYIMKAHVENNLERQEV 789
>gi|374852818|dbj|BAL55742.1| preprotein translocase subunit SecA [uncultured gamma
proteobacterium]
Length = 910
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/438 (50%), Positives = 284/438 (64%), Gaps = 42/438 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAAYLNALPGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +++ FLGLSVG+I G+ +ER+ Y DITY N+ELGFDYLRD++A + E V
Sbjct: 141 QWMGKLYNFLGLSVGVIVSGLSQKERKQAYAADITYATNNELGFDYLRDSMAFSKEDQVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLH----- 151
R +AIVDEVDS+LIDE R PL+ISG + Y + A V L Q
Sbjct: 201 RG---HAYAIVDEVDSILIDEARTPLIISGPTEERTDLYLKMNALVPHLKRQEGEGEDGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMAL-------ETNDLWDE-NDPWARFVMNALKAKEFYRR 203
YTV+ K V LTE G E L L+D N ++ AL+A Y R
Sbjct: 258 YTVDEKTKQVFLTERGHEKVEQLLVQAGLIHSGQSLYDAANIRLLHYLNAALRAHTLYHR 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
DV YIVRNG+ +I++E TGR+ RRWSEG+HQA+EAKEG+ IQ ++ +A IT+Q+ F+
Sbjct: 318 DVDYIVRNGEVIIVDEFTGRIMPGRRWSEGLHQAIEAKEGVPIQQENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KL+GMTGTA TE EF +++ + V+ +PT+ P IR DLP + TAR K+E +++
Sbjct: 378 LYEKLAGMTGTADTEAFEFHQIYGLEVVVIPTHKPMIRKDLPDVVYLTAREKYEAIVKDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
E + +PVLVG+TS+ENSEYLS LLK++GIPH VLNA K+ REA+ +AQAGR A+
Sbjct: 438 EECRKRQQPVLVGTTSIENSEYLSGLLKRKGIPHQVLNA--KHHEREAQIIAQAGRPGAV 495
Query: 384 TISTNMAGRGTDIILGGN 401
TI+TNMAGRGTDI+LGGN
Sbjct: 496 TIATNMAGRGTDIVLGGN 513
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 65/333 (19%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V + GGLHVIG+ HESRRIDNQLRGR+GRQGDPGS+RF +SLQD + + F+ D A
Sbjct: 544 VVQAGGLHVIGSERHESRRIDNQLRGRSGRQGDPGSSRFYLSLQDNLLRIFASDRVAA-- 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
L+ ++ E IE + R + Q E + F IRK+L+E+D V QR+ +Y+LR
Sbjct: 602 LMQKLGMQEGEAIEHPWVTRAIENAQRKVEAHNFDIRKTLLEYDNVANDQRRVIYELRNE 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFA 710
+L A + S + Q V+ E++ ++ P W ++ L + A G L+
Sbjct: 662 LL--AADDVSATLDSIRQDVLAELVDKHLPPDTFEEQWDVEGLERALEAEFG-----LYF 714
Query: 711 GISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTK 770
++ K ++E PEL D LKR + ++ +
Sbjct: 715 PVA-----KRLQEDPELQIAD-------------------------LKREILEAAERAYR 744
Query: 771 NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
+ +LR++ E++VL++ LD W++HL M
Sbjct: 745 EKERQIGPEILRQF--------------------------EKSVLLQVLDNAWKEHLAAM 778
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+ L +++R + R+P +EYK + F SML
Sbjct: 779 DHLRQGIHLRGYAQRDPKQEYKREAFLMFQSML 811
>gi|172040165|ref|YP_001799879.1| preprotein translocase subunit SecA [Corynebacterium urealyticum
DSM 7109]
gi|448823152|ref|YP_007416317.1| preprotein translocase SecA1 subunit [Corynebacterium urealyticum
DSM 7111]
gi|171851469|emb|CAQ04445.1| preprotein translocase SecA1 subunit [Corynebacterium urealyticum
DSM 7109]
gi|448276649|gb|AGE36073.1| preprotein translocase SecA1 subunit [Corynebacterium urealyticum
DSM 7111]
Length = 864
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/436 (47%), Positives = 286/436 (65%), Gaps = 29/436 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G +AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYKVQVMGGAALHFGYVAEMKTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH FLGLS +I P ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHHFLGLSTNVILSEKRPAERREAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDE+DS+LIDE R PL+ISG + A++A L + +HY V+ +
Sbjct: 200 ---GHHYAIVDEIDSILIDEARTPLIISGPVEGSSQWFTAFARIAPRLTRDIHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ +I+
Sbjct: 257 KTIGVKEEGVEFVENQLGIDNLYAPEHSQLVSYLNNAIKAKELFIRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RR++EGIHQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRILDGRRYNEGIHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + +++ V +PTN N RVD + T K+E A +++ G+PVLVG+
Sbjct: 377 EAAELKQTYKLDVAPIPTNRENQRVDNVDLIYKTQEAKFEAAAEDIAERVEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI HNVLNA KY +EAE VA+AG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSKLLQRRGIKHNVLNA--KYHEQEAEIVARAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDR 413
LGGNP ++A + + +R
Sbjct: 495 LGGNPDIIADQDLRER 510
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 166/355 (46%), Gaps = 63/355 (17%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ EV+ GGL+V+GT HESRRIDNQLRGR+ RQGDPG TRF +S++D++ +F
Sbjct: 535 QSKQQAEEVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGETRFYLSMRDDLITRFV 594
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ A +++R+ + I+ + + G Q E +RK+++++DEV+ QRK
Sbjct: 595 GQSMEA--MMTRLNIPDHEAIDSKMVTNAIKGAQSQVEAANLEMRKNVLKYDEVMNEQRK 652
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIA 699
+Y R+ IL G E +QI + ++++ I V+ Y W LD+L + +
Sbjct: 653 VIYAERRQILEG--EDVQRQI----RGMLEDTITAYVNAATAEGYVEDWDLDELWQALQS 706
Query: 700 IAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKR 759
+ G + S ++L+ E KP L SS +
Sbjct: 707 LYGPTM-------SYESLISGSE-----------------YGKPGEL--------SSSQL 734
Query: 760 WLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTL 819
A+ D N +Y D L + + + E + M+ +ER VL+ +
Sbjct: 735 LEAVLKD---ANAQY------------DKLEDAVIEMGGEEQ-----MRGMERGVLLNVV 774
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
D WR+HL M+ L + +R+ R+PL EY+ +G F M R T+ L
Sbjct: 775 DQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGGDMFNRMKEGIREETIRQL 829
>gi|357420164|ref|YP_004933156.1| Preprotein translocase subunit SecA [Thermovirga lienii DSM 17291]
gi|355397630|gb|AER67059.1| preprotein translocase, SecA subunit [Thermovirga lienii DSM 17291]
Length = 895
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 287/433 (66%), Gaps = 30/433 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 LRHFDVQLMGGIALHEGKIAEMKTGEGKTLVATLPVVLNALSGKGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ F GLSVG+I M ++R+ Y+ DITY N+E GFDYLRDN+A +S QLV
Sbjct: 141 EWMRPIYNFFGLSVGVIYAFMDNQKRKEAYQADITYGTNTEFGFDYLRDNMALHSSQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R + I+DEVDS+LIDE R PL+ISG + +V Y A VA L +H+ ++ K
Sbjct: 201 RG---HEYIILDEVDSILIDEARTPLIISGPSEDNVEIYKRANDVALRLKPQVHFEIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V LTEEGIA E L +L+ E N V+ ALKA + +DV Y+V++ + +
Sbjct: 258 ERNVALTEEGIAECEKLLGVENLFGEYHNSELGHRVVQALKAHYLFEKDVHYVVKDNEIV 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE + I ++ +A IT Q+ ++Y K++GMTGTA
Sbjct: 318 IVDEFTGRLMFGRRYSDGLHQAIEAKERVPIGRENQTLATITLQNYVRMYRKIAGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TEE+EF +++ + V+ +PTN P IR D P T + K+ E+E ++ G+PVLV
Sbjct: 378 ATEEEEFKEIYGLEVVVIPTNKPMIRQDYPDVILRTKKEKFAAVADEIEETYKSGQPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TS+ENSE LS +LK + IPH+VLNA KY +EA+ VAQAGR +A+T++TNMAGRGTD
Sbjct: 438 GTTSIENSERLSKILKARKIPHHVLNA--KYHEKEAQIVAQAGRLHAVTVATNMAGRGTD 495
Query: 396 IILGGNPKMLAKK 408
IILGGNP+ LA++
Sbjct: 496 IILGGNPEFLARE 508
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD-LI 592
LGGL VIGT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + F S +D L+
Sbjct: 545 LGGLKVIGTERHESRRIDNQLRGRSGRQGDPGCSRFYLSLEDDLLRLFG---SERIDGLM 601
Query: 593 SRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSIL 652
++ +E IE I + + Q E+Y+F IR+ L+ +D V+ QR+ VY+ R+SIL
Sbjct: 602 QKLGMEEGESIEHGLISKAIESAQKKVEQYHFDIRRQLLLYDNVMNQQREAVYEERRSIL 661
Query: 653 TGAN 656
TG N
Sbjct: 662 TGNN 665
>gi|256833041|ref|YP_003161768.1| Preprotein translocase subunit SecA [Jonesia denitrificans DSM
20603]
gi|256686572|gb|ACV09465.1| preprotein translocase, SecA subunit [Jonesia denitrificans DSM
20603]
Length = 906
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 286/439 (65%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G+IAEMKT +VTVNDYLA+ ++
Sbjct: 81 RHYDVQIMGGAALHMGNIAEMKTGEGKTLVATLPAYLNALSGQGVHIVTVNDYLAKYQSD 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV RFLGL G I G P ERR+ Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 IMGRVFRFLGLKTGCIVSGQNPTERRAQYEADITYGTNNEFGFDYLRDNMAWSMKDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG A DV + Y AKV+ L+ G Y V+ K
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGPADGDVNKWYTEFAKVSRRLIAGEDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ + E GI E L ++L++ N P F+ N++KAKE ++RD Y+V NG+ +I
Sbjct: 258 KRTIGILEPGIEKVEDYLGIDNLYESLNTPLIGFLNNSIKAKELFKRDKDYVVMNGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ I+A++ +A IT Q+ F+LY LSGMTGTA+
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVTIKAENQTLATITLQNYFRLYSTLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF + + V+ +PT+ P RVD + T GK++ Q++ G+P+LVG
Sbjct: 378 TEAAEFHSTYSLGVVPIPTHRPVQRVDQSDLIYKTETGKFQAVVQDIVERHAHGQPILVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LLK+QG+PH VLNA K AREA VA AGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSELLSSLLKKQGVPHEVLNA--KQHAREAAIVAMAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + +A +E R L
Sbjct: 496 MLGGNAEFMAHAELEQRGL 514
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++DE+ + F
Sbjct: 538 VKDEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDELMRLFG- 596
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ A +++R ED+P+E + R + Q E IRK+++++D+VL QR
Sbjct: 597 -SGLAESMMNRAGFPEDVPLESKMVSRGIASAQGQVESRNLEIRKNVLKYDDVLSRQRTV 655
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
+YD R+ +L G E +QI Q + ++I G+V+
Sbjct: 656 IYDERRRVLEG--EDMQEQI----QHFLTDVITGHVE 686
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++ER +++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +ML
Sbjct: 758 LRDLERRIVLSVVDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFTAMLEGV 817
Query: 867 RRLTV 871
+ V
Sbjct: 818 KEEAV 822
>gi|326334189|ref|ZP_08200412.1| preprotein translocase, SecA subunit [Nocardioidaceae bacterium
Broad-1]
gi|325947980|gb|EGD40097.1| preprotein translocase, SecA subunit [Nocardioidaceae bacterium
Broad-1]
Length = 965
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 285/431 (66%), Gaps = 29/431 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI GGA LH G+IAEMKT VVTVNDYLA+ +E
Sbjct: 80 RHYDVQIQGGAALHLGNIAEMKTGEGKTQTAVLPAYLNALAGKGVHVVTVNDYLAKYQSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R++ FLGLSVG+I M P +RR Y CDITY N+ELGFDYLRDN+A++ LV R
Sbjct: 140 VMGRIYGFLGLSVGVILPQMTPAQRREAYNCDITYGTNNELGFDYLRDNMASSMADLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG DV Y A +A+ +V+ + Y V+ K
Sbjct: 200 G---HFFAIVDEVDSILIDEARTPLIISGPTEDDVKWYDEFATIAKSMVRDVDYEVDEKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + E GI E L +L++ N P F+ N++KAKE +RRD +Y+V N + LI+
Sbjct: 257 RTIAVLERGITKVEDHLGIENLYEAVNTPLISFMNNSIKAKELFRRDKEYVVANDEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+++G+HQA+EAKEG+K++ + +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEHTGRMLAGRRYNDGLHQAIEAKEGVKVREEYQTLASITLQNYFRLYEKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+ +PTN P IR D P + T K+E ++ + G+PVLVG+
Sbjct: 377 EESEFDKIYKLGVVPIPTNKPMIRKDQPDLVYRTEVAKYEAVADDIVERHKKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYL ++LK++G+PH VLNA KY A EA+ VA AG K A+T++TNMAGRGTDI+
Sbjct: 437 VSVEKSEYLGNILKKRGVPHTVLNA--KYHADEAKIVALAGHKGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKK 408
LGG+ LA +
Sbjct: 495 LGGSVDFLADQ 505
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 117/199 (58%), Gaps = 9/199 (4%)
Query: 498 KQSAMYPLGPTV---ALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQL 554
++ + P G T + ++ + + E EV +LGGL+V+GT HESRRIDNQL
Sbjct: 508 RKQGLEPTGETADEYEKAWAPTVERIKAQVAAEHEEVTKLGGLYVLGTERHESRRIDNQL 567
Query: 555 RGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
RGR+GRQGDPG +RF +SL+D++ + F + W +++ + +D+PIE ++ + +
Sbjct: 568 RGRSGRQGDPGESRFYLSLEDDLMRLFKGE--WVDRILTTLKIPDDVPIEAKSVTKSIAN 625
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEI 674
Q E F RK+++++D+V++ QRK +Y R+ +L GA+ +QI ++ VV+ +
Sbjct: 626 AQTQVEGQNFESRKNVLKYDDVMDRQRKVIYAERREVLEGAD--LEEQIRGFIDDVVEGM 683
Query: 675 IFGNVDPLKHPRYWSLDKL 693
+ G + W LD+L
Sbjct: 684 VTGATQ--DYAEEWDLDQL 700
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER V++ LD WR+HL M+ L + +R++ R+PL EY+ +G F +M+
Sbjct: 757 MREVERQVVLSVLDRKWREHLYEMDYLREGIGLRAYSQRDPLVEYQREGFDMFTAMMDGI 816
Query: 867 RRLTV 871
+ V
Sbjct: 817 KEAAV 821
>gi|340753905|ref|ZP_08690677.1| translocase subunit secA [Fusobacterium sp. 2_1_31]
gi|422317342|ref|ZP_16398701.1| protein translocase subunit secA [Fusobacterium periodonticum D10]
gi|229423456|gb|EEO38503.1| translocase subunit secA [Fusobacterium sp. 2_1_31]
gi|404589934|gb|EKA92457.1| protein translocase subunit secA [Fusobacterium periodonticum D10]
Length = 877
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/453 (46%), Positives = 292/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGKGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ + V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKRSYEADITYGTNSEFGFDYLRDNMVSDMKNKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y V+ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQVSFQVVSMLTRSFETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ +V LTE+G+ E L+ ++L+ E+ F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRTVVLTEKGVKRVEKILKIDNLYSPEHVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+ I A++ +
Sbjct: 318 LKAKELFKRDRDYLVRENGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVNIAAENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + VI +PTNLP IR D + T
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVIVIPTNLPVIRKDNADLVYKTKN 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
GK + +E+++ G+PVLVG+ S+++SE LS+LLK++G+PHNVLNA K+ A+EAE
Sbjct: 438 GKIKSIIDRIEALYEKGQPVLVGTISIKSSEELSELLKKRGVPHNVLNA--KFHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ VL + C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +S
Sbjct: 540 FPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLS 599
Query: 573 LQDEMFQKFSFD--TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
L+D++ + F + + W + R+ ED PI I + Q E FGIRKSL
Sbjct: 600 LEDDLMRLFGSERVSVW----MERLKLPEDEPITHGMINSAIEKAQKKIEARNFGIRKSL 655
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+EFD+V+ +QRK +Y+ R L+ N +I ++ + ++ +H W +
Sbjct: 656 LEFDDVMNLQRKAIYENRDEALSTDN--LKDKILGMLKDTITAKVYEKF-AAEHKEDWDI 712
Query: 691 DKL 693
D L
Sbjct: 713 DGL 715
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +E+ +L + +D WR+HL ++ L ++ +R++G R+P+ EYKI + F M+S
Sbjct: 765 LRNLEKYILFEVVDNKWREHLKALDGLRESIYLRAYGQRDPVTEYKIISSQIFEEMISNI 824
Query: 867 RRLTVESLVQ 876
+ T L +
Sbjct: 825 KEQTTSFLFK 834
>gi|41409452|ref|NP_962288.1| preprotein translocase subunit SecA [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|81700386|sp|Q73UL2.1|SECA1_MYCPA RecName: Full=Protein translocase subunit SecA 1
gi|41398283|gb|AAS05904.1| SecA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 940
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 289/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDVHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLSGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V ++ G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRTDQSDLIYKTEEAKYIAVVDDVVERYQKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ IPHNVLNA KY +EA VA AGR+ +T++T+MAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRIPHNVLNA--KYHEQEAGIVAVAGRRGGVTVATHMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 5/159 (3%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEA--MLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
E+ +Q + ++ VV + G + W LD L
Sbjct: 663 --ENLKEQALEMVRDVVTAYVNGATAE-GYAEDWDLDAL 698
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+++ E
Sbjct: 820 KEESVGFLFNVTVEAVPAPQVAPVQTPE 847
>gi|15827340|ref|NP_301603.1| preprotein translocase subunit SecA [Mycobacterium leprae TN]
gi|221229818|ref|YP_002503234.1| preprotein translocase subunit SecA [Mycobacterium leprae Br4923]
gi|13431850|sp|P57996.1|SECA1_MYCLE RecName: Full=Protein translocase subunit SecA 1
gi|13092889|emb|CAC30288.1| putative preprotein translocase subunit [Mycobacterium leprae]
gi|219932925|emb|CAR70873.1| putative preprotein translocase subunit [Mycobacterium leprae
Br4923]
Length = 940
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 286/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++GGA LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGGAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGKGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILASMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+AIVDEVDS+LIDE R PL+ISG A Y A++ L+ + +HY V+L+
Sbjct: 201 G---HSYAIVDEVDSILIDEARTPLIISGSADGASNWYTEFARLVRLMDKDVHYEVDLRK 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGMEFVEDQLGIDNLYEVANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVAIPTNKPMIREDRSDLIYKTEEAKYMAVVDDVAERYEKGQPVLIGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA VA AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRHIPHNVLNA--KYHEQEAGIVAVAGRRGGVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + R L
Sbjct: 496 LGGNVDFLTDQRLRRRGL 513
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L + E +EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 528 SELPKVKEEAGQEAAEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 587
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++F T A L++R+ +D+PIE + R + Q E+ F +RK+++++D
Sbjct: 588 DELMRRFHGATLEA--LLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYD 645
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLD 691
EV+ QRK +Y R+ IL G ES QQ +V ++I +D Y W LD
Sbjct: 646 EVMNQQRKVIYAERRRILEG--ESLQQQAL----GMVRDVITAYIDGATTDSYVEDWDLD 699
Query: 692 KL 693
L
Sbjct: 700 AL 701
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 763 MRQLERNVLLNVVDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGV 822
Query: 867 RR--------LTVESLVQYWSSPMESQELF 888
+ L VE++ +P+E E F
Sbjct: 823 KEESVGFLFNLAVEAVPASHVAPVEIPEGF 852
>gi|384136542|ref|YP_005519256.1| Preprotein translocase subunit SecA [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339290627|gb|AEJ44737.1| preprotein translocase, SecA subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 796
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 273/422 (64%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH+G +AEMKT VVTVNDYLA+RDAE
Sbjct: 79 RHFDVQLMGGIVLHEGRVAEMKTGEGKTLVATLPAYLNALTGEGVHVVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ +VHRFLGL+VG M P ++R YR DITY N+E GFDYLRDN+ + E +V R
Sbjct: 139 YTGKVHRFLGLTVGYNGPDMTPAQKREAYRADITYGTNNEFGFDYLRDNMVMSLEDMVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A K Y A + L G Y V+ K
Sbjct: 199 ---KLHYAIVDEVDSILIDEARTPLIISGPAEKSADLYFRADMLVRRLKPGEDYEVDEKM 255
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LTE G+ AE ++L+D EN + ALKA +RD Y+V + I+
Sbjct: 256 RTANLTESGVKKAEQFFRVDNLFDPENVTLMHHITQALKAHGLMKRDKDYVVIGDEVHIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+K+Q +S +A IT Q+ F++Y KL+GMTGTAKT
Sbjct: 316 DEFTGRILHGRRYSEGLHQAIEAKEGVKVQNESKTLAAITLQNYFRMYEKLAGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEF++++ M V+ +PTN P IRVDL + T R K+ +EV G+PVLVG+
Sbjct: 376 EEKEFIEIYGMDVVVIPTNRPMIRVDLDDVVYKTERAKFRAVVEEVARRHAKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TS+E SE LS +L ++GIPH VLNA K+ REAE VA AG++ +TI+TNMAGRGTDII
Sbjct: 436 TSIEKSEILSRMLHERGIPHQVLNA--KHHEREAEIVALAGQRGMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 158/341 (46%), Gaps = 74/341 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 495 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLLRLFGSDNIK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ DED PIE + + Q E + +RK ++ +D+VL QR+ +Y
Sbjct: 555 R--LMDRLGLDEDQPIEQKMLTNAIERAQKKVEGNNYDLRKHVLRYDDVLNKQREVIYRQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK---EFIAIAGKI 704
R+ IL E + ++ ++D ++ + P W L L++ G++
Sbjct: 613 RRQILE--REDLRSIVEGMLEDLIDHMLEVYCSEEQVPEDWDLQALIQYAEHHFLHPGQV 670
Query: 705 LDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAIC 764
++EEL +L+ +I R L +
Sbjct: 671 ---------------TVEELRKLDRDEIK------------------------ARLLELG 691
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+ K R+ LGDI M ++ER VL++ +D W
Sbjct: 692 KQNYDKR----------REELGDI------------------MHQLERLVLLRAVDSKWM 723
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
DH+ M++ +V++RS+G +PL Y+ +G F +M+ +
Sbjct: 724 DHIDAMDQFRQSVHLRSYGQADPLVIYQKEGFEMFEAMIHS 764
>gi|296130164|ref|YP_003637414.1| Preprotein translocase subunit SecA [Cellulomonas flavigena DSM
20109]
gi|296021979|gb|ADG75215.1| preprotein translocase, SecA subunit [Cellulomonas flavigena DSM
20109]
Length = 933
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 281/430 (65%), Gaps = 30/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA A+
Sbjct: 81 RHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALTGKGVHVVTVNDYLAGYQAD 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLGL+ G I + P +RR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 LMGRVYRFLGLTTGTILSQLTPAQRREQYAADITYGTNNEFGFDYLRDNMAWSVDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
HFAIVDEVDS+LIDE R PL+ISG AS D R Y AKV L Y V+ K
Sbjct: 201 G---HHFAIVDEVDSILIDEARTPLIISGPASGDANRWYGEFAKVVRRLQPERDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GIA E L ++L++ N P F+ NA+KAKE ++RD Y+V NG+ LI
Sbjct: 258 KRTVGVLEPGIARVEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVMNGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ I+A++ +A IT Q+ F+LY KL+GMTGTA+
Sbjct: 318 VDEHTGRILPGRRYNEGMHQAIEAKEGVAIKAENQTLATITLQNYFRLYDKLAGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN P R+D + + GK++ ++ G+PVLVG
Sbjct: 378 TEAAEFQGTYKLGVVPIPTNRPMQRIDQKDLVYKSEEGKFDAVVADIVERHAKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LK+QG+PH VLNA K AREA VAQAGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSELLSSKLKKQGVPHEVLNA--KQHAREASIVAQAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LGGN + +A
Sbjct: 496 MLGGNAEFMA 505
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 181/362 (50%), Gaps = 69/362 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL+ + + E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+QD
Sbjct: 530 VLEKAKEAVAAEHEEVTELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMQD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F++ A +++R EDMP+E + R + Q E F IRK+++++D+
Sbjct: 590 DLMR--LFNSGLAESMMTRAGFPEDMPLESKIVTRGIQSAQSQVEARNFEIRKNVLKYDD 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V+ QR+ +Y+ R+ +L G E +Q+ + V L
Sbjct: 648 VMSRQREVIYEQRRRVLHG--EDLQEQVAHFRSDV-----------------------LS 682
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
E++A+A + E PE D++ + RG+
Sbjct: 683 EYVALA------------------TAEGRPE--DWDLDALW--------TALRGVYP--- 711
Query: 756 SLKRWLAICSDDLTK--NGRYRATTNLL-RKYLGDILIASYLNVVQESRYDDVYMKEVER 812
++I +++ + R +T+L+ R+ L D A + +E+ + M+++ER
Sbjct: 712 -----ISITPEEVVEAAGSSTRLSTDLITREVLSD---AEHAYAEREAHLGEANMRQLER 763
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE 872
V++ LD WR+HL M+ L + +R+ R+PL EY+ +G + F +M + + +V+
Sbjct: 764 RVVLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLIEYQREGFQLFTAMTDSIKEESVQ 823
Query: 873 SL 874
L
Sbjct: 824 FL 825
>gi|312879772|ref|ZP_07739572.1| protein translocase subunit secA [Aminomonas paucivorans DSM 12260]
gi|310783063|gb|EFQ23461.1| protein translocase subunit secA [Aminomonas paucivorans DSM 12260]
Length = 895
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/433 (48%), Positives = 288/433 (66%), Gaps = 30/433 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 LRHFDVQLMGGMALHEGKIAEMKTGEGKTLVATLAVVLNALEGKGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+R LGLSVG+I+ M E+R + YR DITY NSE GFDYLRDN+A + EQ V
Sbjct: 141 EWMGPVYRGLGLSVGVIEPFMESEDRFAAYRQDITYGTNSEFGFDYLRDNMALSREQQVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R + F +VDEVDS+L+DE R PL+ISG + + Y A A L G + V+ K
Sbjct: 201 RGHR---FCLVDEVDSILVDEARTPLIISGPSEESTEPYRTADACARSLTAGTDFEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+V LTE GIA E L+ +L+ + + A V+ +LKA ++RDV Y+V++G+ +
Sbjct: 258 ERNVALTEGGIARCEQILKLPNLFTDYGHSELAHKVVQSLKAHHLFQRDVHYVVKDGEIV 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE +++ ++ +A IT Q+ F++Y KL+GMTGTA
Sbjct: 318 IVDEFTGRLMFGRRYSDGLHQAIEAKERVQVGRENQTLATITLQNYFRMYHKLAGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF +++ M V+ VPT+ P IR D P + T R K+ A +EVE F+ G+PVLV
Sbjct: 378 ATEAEEFKEIYGMEVVVVPTHNPMIRTDHPDVIYRTQREKYNAAAEEVEECFKRGQPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E+SE +S LLK + +PH+VLNA K +EA VAQAGR AIT++TNMAGRGTD
Sbjct: 438 GTASIEHSERVSKLLKARKVPHHVLNA--KVHDKEAAIVAQAGRFGAITVATNMAGRGTD 495
Query: 396 IILGGNPKMLAKK 408
I+LGGNP LA++
Sbjct: 496 ILLGGNPSFLARE 508
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ ++L+ C+ E V + GGL ++GT HESRRIDNQLRGR+GRQGDPG +RF+VS
Sbjct: 524 FEALLESQRTLCAQERDRVIQAGGLRILGTERHESRRIDNQLRGRSGRQGDPGESRFLVS 583
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D L++++ +E +E + + + Q E+ +F IRK L+
Sbjct: 584 LEDDLLRLFGSDRVQG--LMTKLGMEEGESVEHSFLSKAIENAQKKVEEMHFDIRKQLLS 641
Query: 633 FDEVLEVQRKHVYDLRQSIL 652
+D V+ QR+ VY R IL
Sbjct: 642 YDNVMNQQREAVYKERGEIL 661
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
R ++++ LD W++HL+ M+ L + +R+ G ++PL EY+ + F ML R
Sbjct: 754 RFLILQVLDTHWKEHLLAMDELRRGIGLRAIGQKDPLVEYQFESFNLFKEMLGRVR 809
>gi|225020675|ref|ZP_03709867.1| hypothetical protein CORMATOL_00682 [Corynebacterium matruchotii
ATCC 33806]
gi|224946621|gb|EEG27830.1| hypothetical protein CORMATOL_00682 [Corynebacterium matruchotii
ATCC 33806]
Length = 843
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 288/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G +AEM+T VVTVNDYLA+RDAE
Sbjct: 71 KHYLVQVMGGAALHFGGVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 130
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M PEER++ Y DITY N+ELGFDYLRDN+ + +LV R
Sbjct: 131 WMGRVHRFLGLKVGVILSNMTPEERKTAYDADITYGTNNELGFDYLRDNMVHSLSELVQR 190
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A Y A +A + +G+HY V+ +
Sbjct: 191 G---HHYAIVDEVDSILIDEARTPLIISGPADGPSQLYTTFAALAPRMREGIHYEVDHRK 247
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ EN ++ NA+KAKE + +D YIV G+ LI+
Sbjct: 248 RTVGVKEEGVEFVENQLGIENLYAPENSQLVSYLNNAIKAKELFTKDKDYIVSKGEVLIV 307
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV E RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 308 DDFTGRVLEGRRYNEGMHQAIEAKEGVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 367
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN RVD+ + T K+ Q++ G+PVLVG+
Sbjct: 368 EAAELHQIYKLDVMPIPTNKKPQRVDMTDLVYKTQEAKFAAVVQDIAERVAKGQPVLVGT 427
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++ I HNVLNA K+ +EA+ +A+AG +T++TNMAGRGTDI+
Sbjct: 428 TSVERSEYLSKLLQRRHIKHNVLNA--KFHEQEAQIIARAGLPGQVTVATNMAGRGTDIV 485
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 486 LGGNPDIIADINLRERGL 503
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 63/346 (18%)
Query: 532 KRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDL 591
++ GGL+V+GT HESRRIDNQLRGR+GRQGDPG TRF +S++D++ +F T ++
Sbjct: 535 RKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGLTRFYLSMRDDLMVRFVGQTME--NM 592
Query: 592 ISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSI 651
++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK +Y R+ I
Sbjct: 593 MNRLNVPDDVPIEAKMVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKVIYRERREI 652
Query: 652 LTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKILDDL 708
L A+ + + +QA++DE I V Y W L+ L + G +
Sbjct: 653 LESADIAAN------IQAMIDETITAYVRGATMNGYVEDWDLESLWHALETLYGPSM--- 703
Query: 709 FAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDL 768
++EEL ID F +L + + + L + +
Sbjct: 704 -----------TVEEL-----IDGTQFGAAGELSADDLLEAVLLDAHTQYEQL---EEAV 744
Query: 769 TKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLI 828
T G NL R+ + IL + +E Y+ Y+KE
Sbjct: 745 TLIGGEAQMRNLERQVILPILDQKW----REHLYEMDYLKE------------------- 781
Query: 829 NMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 782 -------GIGLRAMAQRDPLVEYQKEGGEMFDAMKDAIKEETVRQL 820
>gi|325291340|ref|YP_004267521.1| protein translocase subunit secA [Syntrophobotulus glycolicus DSM
8271]
gi|324966741|gb|ADY57520.1| protein translocase subunit secA [Syntrophobotulus glycolicus DSM
8271]
Length = 834
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/429 (47%), Positives = 288/429 (67%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VL+DG IAEMKT VVTVNDYLA RDA
Sbjct: 79 RHYDVQLIGGMVLNDGRIAEMKTGEGKTLVATLPCYLNALEGKGVHVVTVNDYLASRDAH 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +++RFLG++VGLI G+ E++R +Y+ DITY N+E GFDYLRDN+A + +V R
Sbjct: 139 WMGQIYRFLGMTVGLIVHGLSHEQKRESYQADITYGTNNEFGFDYLRDNMAVSPRGIVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P ++AI+DEVDS+LIDE R PL+ISGEA K Y +KV L Y V K+
Sbjct: 199 DP---NYAIIDEVDSILIDEARTPLIISGEADKPTELYYRVSKVIPRLKPEEDYHVNEKD 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTEEG++ E L ++++D+ ++ A V ALKA ++RD Y+V++G+ +I+
Sbjct: 256 RVVTLTEEGVSRVETMLGVDNMYDDLHNEVAHHVNQALKAYTLFKRDRDYVVKDGEVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +KI+ ++ +A IT+Q+ F++Y KL GMTGTAKT
Sbjct: 316 DEFTGRMMFGRRYSEGLHQAIEAKENVKIEKETQTLATITFQNYFRMYHKLGGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF+ ++ + V+ VPTN+P +R D+P + T +GK++ +++ F G+P LVG+
Sbjct: 376 EENEFINIYGLDVVIVPTNMPMVRKDMPDIVYRTEQGKFKAVVEDIIDKFSKGQPTLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SE LS++L+++ +PH VLNA K+ EA+ VA+AG K +TI+TNMAGRGTDI+
Sbjct: 436 VSIEKSEVLSEMLQKKSVPHQVLNA--KFHEIEAQIVAKAGEKGMVTIATNMAGRGTDIV 493
Query: 398 LGGNPKMLA 406
LG K L
Sbjct: 494 LGEGVKELG 502
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 71/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS++F +S++D++ + F D
Sbjct: 495 GEGVKELGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSQFYISMEDDLMRLFGGDNIA 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ D+ +PIE + + + G Q E F +RK ++ +D+V+ QR+ +Y
Sbjct: 555 G--FMDKLGMDDSVPIESKIVSKSIEGSQKRVENRNFEVRKHVLNYDDVMNKQREIIYLQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+++LT E+ +QI ++ K++ D
Sbjct: 613 RRAVLT--KENVGEQIQDMLE----------------------------------KVIKD 636
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
SG+T ++P L N + P+ I +++
Sbjct: 637 TIVRFSGETPYPEEWDIPSLLEY-CENVFLPNH---------------------EITNEE 674
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ + LL K A L +E + M+E+ERAV+++ +D W+DHL
Sbjct: 675 IENLSQVEVEEFLLEK-------ARELYEKREDEFGSELMREIERAVVLQIVDTHWKDHL 727
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
M+ L + +R++G ++PL EY+ + F M+SA + E +V Y
Sbjct: 728 DAMDMLRDGIGLRAYGQKDPLVEYRNEAYEMFQGMISAIQ----EDIVTY 773
>gi|219670743|ref|YP_002461178.1| preprotein translocase subunit SecA [Desulfitobacterium hafniense
DCB-2]
gi|166918873|sp|Q24MT3.2|SECA_DESHY RecName: Full=Protein translocase subunit SecA
gi|219541003|gb|ACL22742.1| preprotein translocase, SecA subunit [Desulfitobacterium hafniense
DCB-2]
Length = 834
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/422 (49%), Positives = 280/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T +VTVNDYLA+RD+E
Sbjct: 79 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGRGVHIVTVNDYLARRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+H+FLGLSVGLI G+ +RR +Y DITY N+E GFDYLRDN+ + LV R
Sbjct: 139 MMGRIHQFLGLSVGLIVHGLNYAQRRESYAADITYGTNNEFGFDYLRDNMVTRPDGLVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A + L Y V K+
Sbjct: 199 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYNRIAMIIPRLKPEEDYNVNEKD 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L +L+D+ + A V LKA ++ D Y+V++G+ +I+
Sbjct: 256 RVVTLTEQGVSRVETMLSVENLFDDLHTELAHHVNQGLKAHALFKLDRDYVVKDGQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +KI+ +S +A IT+Q+ F+++ KL+GMTGTA T
Sbjct: 316 DEFTGRLMFGRRYSEGLHQAIEAKEKVKIEKESQTLATITFQNYFRMFEKLAGMTGTAMT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN+P IR DLP + T GK++ +E+ + G+PVLVG+
Sbjct: 376 EEPEFKKIYKLDVVEIPTNMPMIREDLPDVVYRTEEGKFKAVVEEIIERHKKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE LS +L+++GIPH VLNA K+ +EAE +A AG K +TI+TNMAGRGTDII
Sbjct: 436 VSVEKSERLSSMLERRGIPHQVLNA--KFHEKEAEIIAGAGLKGMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 8/170 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 495 GEEVAPLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRLFGADN-- 552
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ D+ +PI I R + Q E F IRK ++++D+V+ +QR+ +Y
Sbjct: 553 ITGMMDKLGMDDSVPITSKMISRSVETAQRRVENRNFEIRKHVLDYDDVMNLQREVIYAQ 612
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ +L G N ES + + + ++ VD +FG P +P W L+ L+
Sbjct: 613 RRQVLMGGNIQESIADMLEKVVRETVD--MFGAQSP--YPEEWDLNSFLE 658
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+E+ + + M+E+ERAV+++ +D W DHL M+ L + +R++G +NPL EY+ +
Sbjct: 697 TRETAFGEEIMREIERAVMLQVVDKKWMDHLDAMDMLREGIGLRAYGQKNPLVEYRREAY 756
Query: 857 RFFISMLSATRRLTVESLVQ 876
F M+S+ + T+ +++
Sbjct: 757 DMFQGMISSIQEDTIRYIMR 776
>gi|239905383|ref|YP_002952122.1| preprotein translocase subunit SecA [Desulfovibrio magneticus RS-1]
gi|259509937|sp|C4XJ72.1|SECA_DESMR RecName: Full=Protein translocase subunit SecA
gi|239795247|dbj|BAH74236.1| preprotein translocase SecA subunit [Desulfovibrio magneticus RS-1]
Length = 838
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 284/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 81 MRHYDVQLIGGITLHQGKIAEMKTGEGKTLVATLPVVLNALSGKGVHLITVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG+I G+ ++R++ Y DITY N+E GFDYLRDN+ EQLV
Sbjct: 141 AWMGKLYGFLGLSVGVIVHGLDDQQRQAAYGADITYGTNNEFGFDYLRDNMKFYQEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+LIDE R PL+ISG+A Y + +L + H+TV+ K
Sbjct: 201 R---PLNFAIVDEVDSILIDEARTPLIISGQAEDSSTLYARVNALIPMLRRETHFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT+EG+A E L+ ++L+D N V+ ALKA ++RDV Y+V++G+ +I
Sbjct: 258 ARTVLLTDEGVARMEDVLKIDNLFDPANITLQHHVLQALKAHHIFQRDVDYVVKDGQVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE ++++A++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKELVQVEAENQTLATITFQNYFRMYKKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PTN P +R D P + T R K+E +V+ + + G+PVLVG
Sbjct: 378 TEAVEFREIYGLEVISIPTNKPMVRKDFPDLVYKTQREKFEAIAADVKDLHKRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LSD+LK+ G+PH+VLNA K +EAE VA AG +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELLSDMLKKTGVPHDVLNA--KNHEKEAEIVALAGHAGKVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 95/148 (64%), Gaps = 4/148 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GPGVTDLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLMRLFGSDRLK 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ ++ PIE + R + Q E + F IRK L+++D V+ QR+ +Y
Sbjct: 558 G--LMDKLGMEDGEPIENRMVSRAIENAQKRVEAHNFEIRKQLLDYDNVMNQQREVIYSR 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEII 675
R+ ++ G++E + + ++++ +VDEI
Sbjct: 616 RRELM-GSDEPET-FVQEHIEEIVDEIF 641
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
+ KEV R L+ +LD W++HL++M+ L + +R +G ++P +EYK +G F ++
Sbjct: 701 AHYKEVARYFLLDSLDRHWKEHLLSMDHLRDGIGLRGYGQKDPKQEYKREGFELFQQLIY 760
Query: 865 ATRRLTVESL 874
R + +L
Sbjct: 761 NMRDAAIRAL 770
>gi|149194619|ref|ZP_01871715.1| preprotein translocase ATPase subunit [Caminibacter mediatlanticus
TB-2]
gi|149135363|gb|EDM23843.1| preprotein translocase ATPase subunit [Caminibacter mediatlanticus
TB-2]
Length = 880
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/420 (49%), Positives = 278/420 (66%), Gaps = 29/420 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH+G IAEMKT VVTVNDYLAQRDA
Sbjct: 89 MRHYDVQLVGGMVLHEGKIAEMKTGEGKTLVATLPVVLNAILGKGVHVVTVNDYLAQRDA 148
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M +++ F GLS G++ GM ER+ Y CD+TY NSE GFDYLRDN+ + V
Sbjct: 149 SEMGKLYEFFGLSTGVVVGGMEDYERKKAYECDVTYGTNSEFGFDYLRDNMVFDINDKVQ 208
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG A+K V Y A KVA+ L H+T++ K
Sbjct: 209 RG---HYYAIVDEVDSILIDEARTPLIISGPANKTVENYIKADKVAKQLEVEKHFTIDEK 265
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ V LTEEGI AE +L+ EN A + ALKA ++ YIVR G+ LI
Sbjct: 266 DRVVLLTEEGIKKAEELFGVENLYTPENAILAHHLDQALKANYLFKEGKDYIVRKGEILI 325
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKEG++IQ +S A ITYQ+ F++Y KL+GMTGTA+
Sbjct: 326 VDEFTGRIAEGRRFSEGLHQALEAKEGVEIQEESQTFADITYQNYFRMYEKLAGMTGTAQ 385
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EFL+++ + VI +PTN P R DL + T K+E ++V+ + + G+PVL+G
Sbjct: 386 TEATEFLEIYGLEVISIPTNKPIARKDLNDVVYKTEEEKFEAVVKKVKELHKKGQPVLIG 445
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSV+ SEYLS LLK++ IPH VLNA K+ +EAE +A+AG+K A+T++TNMAGRG DI
Sbjct: 446 TTSVQKSEYLSRLLKKEKIPHTVLNA--KHHEKEAEIIAKAGQKGAVTVATNMAGRGVDI 503
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 529 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWA 588
EV+ LGGL++IGT HESRRIDNQLRGRAGRQGDPG ++F +SL+D++ + F D
Sbjct: 507 DEVRSLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGVSQFYLSLEDDLLRIFGSDRIKH 566
Query: 589 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
+ + R+ + I+ + R + Q E +F RK ++++D+V QRK +Y R
Sbjct: 567 I--MDRLGIERGEHIDSKIVTRAIEKAQKKVETMHFEARKHILKYDDVANEQRKVIYKFR 624
Query: 649 QSIL 652
+L
Sbjct: 625 DQLL 628
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R ++++ LD WR+HL M+ L + + +R + ++PL EYK + F ++ RR+ V
Sbjct: 722 RQIMLQVLDEAWREHLYTMDVLKTGIGLRGYNQKDPLVEYKKESFELFTDLI---RRVKV 778
Query: 872 ESL 874
+SL
Sbjct: 779 DSL 781
>gi|311070035|ref|YP_003974958.1| preprotein translocase subunit SecA [Bacillus atrophaeus 1942]
gi|419821591|ref|ZP_14345184.1| preprotein translocase subunit SecA [Bacillus atrophaeus C89]
gi|310870552|gb|ADP34027.1| preprotein translocase subunit SecA [Bacillus atrophaeus 1942]
gi|388474227|gb|EIM10957.1| preprotein translocase subunit SecA [Bacillus atrophaeus C89]
Length = 841
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALSGKGVHIVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGLSVGL M EE+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIYEFLGLSVGLNLNSMTKEEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A+K Y A L +T ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDFTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYAKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNQPVVRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R ++ +E+ + +++ ++ I + P W LD L++
Sbjct: 614 RFEVID--SENLRDIVENMIKSSLERAIAAYTPKEELPEEWKLDGLVE 659
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEENFGAEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFT 758
Query: 858 FFISMLSA 865
F M+++
Sbjct: 759 MFEHMIAS 766
>gi|337744476|ref|YP_004638638.1| protein SecA [Paenibacillus mucilaginosus KNP414]
gi|386720676|ref|YP_006187001.1| protein SecA [Paenibacillus mucilaginosus K02]
gi|336295665|gb|AEI38768.1| SecA [Paenibacillus mucilaginosus KNP414]
gi|384087800|gb|AFH59236.1| SecA [Paenibacillus mucilaginosus K02]
Length = 836
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/422 (48%), Positives = 281/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLH+G IAEM+T VVTVNDYLAQRD+
Sbjct: 81 RHYDVQLIGGMVLHEGKIAEMRTGEGKTLVGTLPVYLNALAGKGVHVVTVNDYLAQRDSA 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++H FLGL+VG+ M E +++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQLHNFLGLTVGVNLSNMSHEAKQAAYACDITYGTNNEFGFDYLRDNMVVYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P + ++DEVDS+L+DE R PL+ISG+A+K Y +A +V L + Y +++K
Sbjct: 201 ---PLSYCVIDEVDSILVDEARTPLIISGQAAKSTEMYLIADQVVSRLKEEEDYIIDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G+A E + +L+D E+ + ALKA +RDV Y+V G+ +I+
Sbjct: 258 RSVTLTEAGVAKVERSFGIENLFDHEHVTINHHIQQALKAHAIMKRDVDYVVSEGEIMIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE L++Q +S+ +A IT Q+ F++Y KLSGMTGTAKT
Sbjct: 318 DEFTGRLMTGRRYSEGLHQAIEAKEHLQVQNESMTLATITLQNYFRMYRKLSGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + VI +PTN P IR D+P + + + K+ E+ + +PVLVG+
Sbjct: 378 EEEEFKKIYGLEVITIPTNKPTIRQDIPDVVYKSVQSKFRAVVNEIAERHKNKQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++GIPH VLNA KY A EAE V++AG+ A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSEVLSEMLKKKGIPHKVLNA--KYHAEEAEIVSRAGQLGAVTIATNMAGRGTDIM 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 163/347 (46%), Gaps = 82/347 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F +
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLEDELMRRFGAENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ +ED PIE I + + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 557 G--MMDRLGFEEDQPIESKLISKAIESAQKRVEGNNFDVRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ++ N + EI+ G + P+ +D+++ A
Sbjct: 615 RREVIESEN--------------IREIVMGMIMPV-------IDRIVDAHCA-------- 645
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
E+LPE L+ + C+
Sbjct: 646 --------------EDLPE---------------------------EWDLQAIVDYCNGT 664
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD-------VYMKEVERAVLVKTLD 820
G+ +A L K DI A YL V Y++ +M+E E+ VL++ +D
Sbjct: 665 FLHEGQLKA-EELEGKEKEDI--AEYLKGVLTRLYEEREAAIGAEFMREFEKVVLLRAVD 721
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
W DH+ M++L +++R++G +PL EY+ +G F M+ + +
Sbjct: 722 SKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGYEMFQEMIQSIQ 768
>gi|358466432|ref|ZP_09176257.1| hypothetical protein HMPREF9093_00727 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069069|gb|EHI79022.1| hypothetical protein HMPREF9093_00727 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 843
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/453 (46%), Positives = 292/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 47 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGKGVHVITVNDYLAKRDR 106
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y+ DITY NSE GFDYLRDN+ ++ + V
Sbjct: 107 DQMSRLYGFLGLSSGVILNGLPTEQRKRSYQSDITYGTNSEFGFDYLRDNMVSDMKNKVQ 166
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y V+ +V +L +
Sbjct: 167 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQVSFQVVSMLTRSFETEKIKN 223
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ +V LTE+G+ E L+ ++L+ E+ F+ A
Sbjct: 224 IKEKKAMNIPDEKWGDYEVDEKSRTVVLTEKGVKRVEKILKIDNLYSPEHVELTHFLNQA 283
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+ I A++ +
Sbjct: 284 LKAKELFKRDRDYLVRENGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVNIAAENQTL 343
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + VI +PTNLP IR D + T
Sbjct: 344 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVIVIPTNLPVIRQDDADLVYKTKN 403
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
GK + +E ++ G+PVLVG+ S+++SE LS+LLK++G+PHNVLNA K+ A+EAE
Sbjct: 404 GKIKSIIDRIEGLYEKGQPVLVGTISIKSSEELSELLKKKGVPHNVLNA--KFHAQEAEI 461
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 462 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 494
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 12/187 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D
Sbjct: 509 VLAKYQEQCKEEKEQVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLED 568
Query: 576 EMFQKFSFD--TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
++ + F + + W + R+ ED PI I + Q E FGIRKSL+EF
Sbjct: 569 DLMRLFGSERVSVW----MERLKLPEDEPITHGMINSAIEKAQKKIEARNFGIRKSLLEF 624
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
D+V+ +QRK +Y+ R L ++ +I ++ + ++ +H W ++ L
Sbjct: 625 DDVMNLQRKAIYENRNEAL--GTDNLKDKILGMLKDTITAKVYEKF-AAEHKEDWDIEGL 681
Query: 694 ---LKEF 697
LK+F
Sbjct: 682 NEYLKDF 688
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +E+ +L + +D WRDHL ++ L ++ +R++G R+P+ EYKI + F M+S
Sbjct: 731 LRNLEKYILFEVVDNKWRDHLKALDGLRESIYLRAYGQRDPVTEYKIISSQIFEEMISNI 790
Query: 867 RRLTVESLVQ 876
+ T L +
Sbjct: 791 KEQTTSFLFK 800
>gi|374299961|ref|YP_005051600.1| protein translocase subunit secA [Desulfovibrio africanus str.
Walvis Bay]
gi|332552897|gb|EGJ49941.1| Protein translocase subunit secA [Desulfovibrio africanus str.
Walvis Bay]
Length = 838
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 280/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFD+Q++GG VLH G IAEMKT V+TVNDYLA+RDA
Sbjct: 81 MRHFDMQLVGGVVLHRGRIAEMKTGEGKTLVATLPVVLNSLKGRGVHVITVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGL+VG+I G+ PEERR Y DITY N+E GFDYLRDN+A + +V
Sbjct: 141 EWMSAIYNFLGLTVGVILHGLSPEERRQAYGSDITYGTNNEFGFDYLRDNMAFSMAHVVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG+A K + Y + L + ++V+ K
Sbjct: 201 R---DLHYAIVDEVDSILIDEARTPLIISGQAEKSTSMYGRINSIVPKLERDKDFSVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTEEG+ AE L +L+D +N + ++ ALKA ++ +V YIV+ G+ +I
Sbjct: 258 GKSVSLTEEGVTHAEQILGVENLYDPQNITFQHHILQALKAHSLFQNEVDYIVKEGEVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+ ++A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEGVAVKAENQTLASITFQNYFRMYDKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V +PT+ P +R D + T R K+E +++ + R G+PVLVG
Sbjct: 378 TEAVEFKQIYNLDVTVIPTHKPMVRKDFADIIYKTQREKFEAICKDIAELNRKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK+ G+PHNVLNA K REAE VA+AG K +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELLSKMLKKSGVPHNVLNA--KQHEREAEIVAEAGHKGKVTIATNMAGRGTDI 495
Query: 397 ILG 399
LG
Sbjct: 496 KLG 498
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 159/349 (45%), Gaps = 73/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GEGVTDLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLMRLFGSDR-- 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ + IE I + + Q E + F IRK+L+E+D+V+ QR +YD
Sbjct: 556 IAGLMDRLGMQDGEAIENRMITKAIENAQKRVEAHNFEIRKTLLEYDDVMNQQRHVIYDQ 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ++T LD L + ++ A +LD+
Sbjct: 616 RRDLMT------------------------------------LDNLEEHALSFADDLLDE 639
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+A + G K EE+ LNS+ DL + + + + + W+ D+
Sbjct: 640 TYAMLGGPK-DKPDEEI--LNSVRTRLVEVLDLSRFEEFKQELPSREQA-GEWVQAILDN 695
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L+ GD + EV R +++ LD W+DHL
Sbjct: 696 -------------LKGQAGD------------------HYNEVLRFFMLEALDRNWKDHL 724
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
+ M+ L + +R +G ++P +EYK +G F ML + T+ +L
Sbjct: 725 LQMDHLREGIGLRGYGQKDPKQEYKREGFELFQDMLFRVKENTMRALTH 773
>gi|218778687|ref|YP_002430005.1| preprotein translocase subunit SecA [Desulfatibacillum alkenivorans
AK-01]
gi|226732188|sp|B8FHX0.1|SECA_DESAA RecName: Full=Protein translocase subunit SecA
gi|218760071|gb|ACL02537.1| preprotein translocase, SecA subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 841
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 281/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G+IAEMKT VVTVNDYLA RD
Sbjct: 81 MRHFDVQLIGGMVLHQGNIAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLATRDT 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLG++VG I G+ +ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 EWMGQIYRFLGMTVGTIVHGLDDDERQEAYNADITYGTNNEFGFDYLRDNMKYSRGHFVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFAIVDEVDS+LIDE R PL+ISG A K Y V L + HYT++ K
Sbjct: 201 R---DHHFAIVDEVDSILIDEARTPLIISGPAEKSTQLYYQVDVVIPRLREEDHYTIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG+ + E L ++L+D +N V ALKA ++RDV YIV+ G+ +I
Sbjct: 258 ARTVVLTEEGVKVVEGGLGVDNLYDHKNMEILHHVNQALKAHTLFKRDVDYIVKQGEVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE +KI+ ++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEKVKIENENQTLASITFQNYFRMYEKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ +PTN+P IR D P + + + K+E E++ + R G+PVLVG
Sbjct: 378 TEAPEFKKIYDLDVVVIPTNMPMIRKDYPDVIYRSKQEKYEAVINEIQELHRSGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+++SE L+ +LK++G+PHNVLNA+ EA+ VA AG+ ++TISTNMAGRGTDI
Sbjct: 438 TISIDDSETLAKMLKKRGVPHNVLNAKNHEG--EAQIVANAGQAGSVTISTNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 496 KLGEGVKELG 505
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 161/349 (46%), Gaps = 71/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +S+ D++ + F +
Sbjct: 498 GEGVKELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSMDDDLLRIFGGERMS 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + + +E PIE + R + Q E + F RK ++E+D+V+ QR+ +Y
Sbjct: 558 KI--MDTLGMEEGEPIEAKILSRGIENAQAKVEAHNFEGRKHILEYDDVMNQQREVIYRQ 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL+G ES I ++ + + I + D H + W + I DD
Sbjct: 616 RREILSG--ESLRPNIEAMIEDLTEGIAAVHADDRTHAKDWDWEA-----------INDD 662
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
++A GIR + DD
Sbjct: 663 MYAQF------------------------------------GIR-----------VQVDD 675
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRD 825
K+ + + LGDIL + + V +E + +E V+++T+D W+D
Sbjct: 676 EIKD-------KIKSQELGDILYQTAIEVYDAKEKSIGSDQWRNLEEYVMLRTVDSLWKD 728
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
HL++M+ L + +RS+ + PL YK +G F M+ + V+ L
Sbjct: 729 HLLSMDHLREGIGLRSYAQQQPLIVYKKEGFEMFQEMIDKIQEEVVKLL 777
>gi|89897616|ref|YP_521103.1| hypothetical protein DSY4870 [Desulfitobacterium hafniense Y51]
gi|423076127|ref|ZP_17064841.1| preprotein translocase, SecA subunit [Desulfitobacterium hafniense
DP7]
gi|89337064|dbj|BAE86659.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361852944|gb|EHL05142.1| preprotein translocase, SecA subunit [Desulfitobacterium hafniense
DP7]
Length = 840
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/422 (49%), Positives = 280/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T +VTVNDYLA+RD+E
Sbjct: 85 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGRGVHIVTVNDYLARRDSE 144
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+H+FLGLSVGLI G+ +RR +Y DITY N+E GFDYLRDN+ + LV R
Sbjct: 145 MMGRIHQFLGLSVGLIVHGLNYAQRRESYAADITYGTNNEFGFDYLRDNMVTRPDGLVQR 204
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A + L Y V K+
Sbjct: 205 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYNRIAMIIPRLKPEEDYNVNEKD 261
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L +L+D+ + A V LKA ++ D Y+V++G+ +I+
Sbjct: 262 RVVTLTEQGVSRVETMLSVENLFDDLHTELAHHVNQGLKAHALFKLDRDYVVKDGQVIIV 321
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +KI+ +S +A IT+Q+ F+++ KL+GMTGTA T
Sbjct: 322 DEFTGRLMFGRRYSEGLHQAIEAKEKVKIEKESQTLATITFQNYFRMFEKLAGMTGTAMT 381
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN+P IR DLP + T GK++ +E+ + G+PVLVG+
Sbjct: 382 EEPEFKKIYKLDVVEIPTNMPMIREDLPDVVYRTEEGKFKAVVEEIIERHKKGQPVLVGT 441
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE LS +L+++GIPH VLNA K+ +EAE +A AG K +TI+TNMAGRGTDII
Sbjct: 442 VSVEKSERLSSMLERRGIPHQVLNA--KFHEKEAEIIAGAGLKGMVTIATNMAGRGTDII 499
Query: 398 LG 399
LG
Sbjct: 500 LG 501
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 8/170 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 501 GEEVAPLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRLFGADN-- 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ D+ +PI I R + Q E F IRK ++++D+V+ +QR+ +Y
Sbjct: 559 ITGMMDKLGMDDSVPITSKMISRSVETAQRRVENRNFEIRKHVLDYDDVMNLQREVIYAQ 618
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ +L G N ES + + + ++ VD +FG P +P W L+ L+
Sbjct: 619 RRQVLMGGNIQESIADMLEKVVRETVD--MFGAQSP--YPEEWDLNSFLE 664
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+E+ + + M+E+ERAV+++ +D W DHL M+ L + +R++G +NPL EY+ +
Sbjct: 703 TRETAFGEEIMREIERAVMLQVVDKKWMDHLDAMDMLREGIGLRAYGQKNPLVEYRREAY 762
Query: 857 RFFISMLSATRRLTVESLVQ 876
F M+S+ + T+ +++
Sbjct: 763 DMFQGMISSIQEDTIRYIMR 782
>gi|410463831|ref|ZP_11317320.1| preprotein translocase, SecA subunit [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409983040|gb|EKO39440.1| preprotein translocase, SecA subunit [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 838
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 284/423 (67%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 81 MRHYDVQLIGGITLHQGKIAEMKTGEGKTLVATLPVVLNALSGKGVHLITVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG+I G+ ++R++ Y DITY N+E GFDYLRDN+ EQLV
Sbjct: 141 AWMGKLYGFLGLSVGVIIHGLDDQQRQAAYGADITYGTNNEFGFDYLRDNMKFYQEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+LIDE R PL+ISG+A Y + +L + H+TV+ K
Sbjct: 201 R---PLNFAIVDEVDSILIDEARTPLIISGQAEDSSTLYARVNALIPMLHKETHFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT+EG+A E L+ ++L+D N V+ ALKA ++RDV Y+V++G+ +I
Sbjct: 258 ARTVLLTDEGVARMEDVLKIDNLFDAANITLQHHVLQALKAHHIFQRDVDYVVKDGQVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE ++++A++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKELVEVEAENQTLATITFQNYFRMYKKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PTN P +R D P + T R K+E +V+ + + G+PVLVG
Sbjct: 378 TEAVEFREIYGLEVISIPTNKPMVRKDFPDLVYKTQREKFEAIAADVKELHKRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LSD+LK+ G+PH+VLNA K +EAE VA AG +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELLSDMLKKTGVPHDVLNA--KNHEKEAEIVALAGHAGKVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 95/148 (64%), Gaps = 4/148 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GPGVTDLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLMRLFGSDRLK 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ ++ PIE + R + Q E + F IRK L+++D V+ QR+ +Y
Sbjct: 558 G--LMDKLGMEDGEPIENRMVSRAIENAQKRVEAHNFDIRKQLLDYDNVMNQQREVIYSR 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEII 675
R+ ++ G+NE + + ++++ +VDEI
Sbjct: 616 RRELM-GSNEPEA-FVQEHIEDIVDEIF 641
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
+ KEV R L+ +LD W++HL++M+ L + +R +G ++P +EYK +G F ++
Sbjct: 701 AHYKEVARYFLLDSLDRHWKEHLLSMDHLRDGIGLRGYGQKDPKQEYKREGFELFQQLIY 760
Query: 865 ATRRLTVESL 874
R ++ +L
Sbjct: 761 NMRDASIRAL 770
>gi|365175722|ref|ZP_09363149.1| preprotein translocase, SecA subunit [Synergistes sp. 3_1_syn1]
gi|363612290|gb|EHL63835.1| preprotein translocase, SecA subunit [Synergistes sp. 3_1_syn1]
Length = 903
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/436 (48%), Positives = 286/436 (65%), Gaps = 30/436 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHF Q+IGG VLHDG+IAEMKT VVTVNDYLA RDA
Sbjct: 83 LRHFKEQLIGGMVLHDGNIAEMKTGEGKTLVATLAVALNAIAGKGVHVVTVNDYLAARDA 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM V+R +GL+VG+I M EER + YRCDITY NSE GFDYLRDN+A EQ V
Sbjct: 143 AWMGPVYRGMGLTVGVISPFMPEEERFAAYRCDITYGTNSEFGFDYLRDNMAIQKEQQVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F IVDEVDS+LIDE R PL+ISG + D Y VA VA L +G + V+ K
Sbjct: 203 RG---HFFCIVDEVDSILIDEARTPLIISGPSEDDTEPYRVADGVARELAKGADFEVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
++ LTE GIA AE ++ +L+ + N + ++ ALKA ++RDV Y+V++G+ +
Sbjct: 260 ERNLALTEAGIAKAERIMKLPNLFTDFANSSLSHKIVQALKAHHLFQRDVHYVVKDGEIV 319
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE +K+ ++ +A IT Q+ F++Y KL+GMTGTA
Sbjct: 320 IVDEFTGRLMFGRRYSDGLHQAIEAKERVKVGRENQTLATITLQNYFRMYNKLAGMTGTA 379
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF +++ + VI VPT+ P +R D P + TA K+ A E G+P+L+
Sbjct: 380 LTEAEEFKEIYGLEVIVVPTHRPMVRNDQPDAVYKTAEEKYIAAADEAAEFHAKGQPILI 439
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E+SE +S LL+ + IPHNVLNA K +EA VAQAGR A+T++TNMAGRGTD
Sbjct: 440 GTASIEHSERVSKLLRVRKIPHNVLNA--KVHDKEASIVAQAGRLGAVTVATNMAGRGTD 497
Query: 396 IILGGNPKMLAKKIIE 411
I+LGGNP+ LA++ IE
Sbjct: 498 IVLGGNPEFLAREEIE 513
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 162/365 (44%), Gaps = 73/365 (20%)
Query: 511 LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFM 570
L Y L+ + C+ E +V GGL +IGT HESRRIDNQLRGR+GRQGDPG +RF
Sbjct: 524 LLYAETLEKYKKICAEEHDKVIETGGLRIIGTERHESRRIDNQLRGRSGRQGDPGESRFY 583
Query: 571 VSLQDEMFQKFSFD-TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKS 629
++L+D++ + F D S +D + T + IE + + + Q E+ +F IRK
Sbjct: 584 IALEDDLIRLFGGDRISGIMDKLGMETGE---SIEHPLLSKAIENAQKKVEEMHFDIRKQ 640
Query: 630 LVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
L+ +D V+ QR+ +Y R IL DE I G
Sbjct: 641 LLSYDNVMNRQREAIYRERAEILD------------------DEDIIG------------ 670
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDI--NNFYFPDLPKPPNLF 747
+ L A +D +FA KS EE P++ S+ + N ++P
Sbjct: 671 --RTLGVLEDTAQAQMDKIFAD-------KSAEE-PDVKSVSVRLNALFWP--------- 711
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
GI R ++ + + RA N + LG++L
Sbjct: 712 -GIARHLDGVQAEVELEEARPKIIEEIRARFNQKTQELGEVL-----------------S 753
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+++ R + ++ LD W++HL+ M+ L + +R+ G ++PL EY+ + F ML R
Sbjct: 754 EQIYRYIFLEVLDKNWKEHLLAMDELRRGIGLRAIGQKDPLVEYQFESFNLFQEMLDQVR 813
Query: 868 RLTVE 872
E
Sbjct: 814 EGITE 818
>gi|340750279|ref|ZP_08687124.1| translocase subunit secA [Fusobacterium mortiferum ATCC 9817]
gi|229419923|gb|EEO34970.1| translocase subunit secA [Fusobacterium mortiferum ATCC 9817]
Length = 889
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 287/450 (63%), Gaps = 49/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG VLH+G I EMKT V+TVNDYLA RD
Sbjct: 81 MRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATCPVYLNALAGKGVHVITVNDYLAARDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGL+ G+I G+ EER++ Y CDITY NSE GFDYLRDN+ + E+ V
Sbjct: 141 EMMGRLYSFLGLTSGVILNGISGEERKAAYNCDITYGTNSEFGFDYLRDNMVGSLEEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL-----VQGLH- 151
R P ++ IVDEVDS+LIDE R PL+ISG A Y + +V +L +G+
Sbjct: 201 R---PLNYCIVDEVDSILIDEARTPLIISGAAEDSTKWYQIFYQVVSMLNRSYETEGIKD 257
Query: 152 --------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALK 196
Y V+ K ++ LTE+GIA E L+ +L+ EN ++ ALK
Sbjct: 258 VKLKKELPAEKFGDYEVDEKAKNIVLTEKGIAKVEKFLKLENLYSPENVELTHYLNQALK 317
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
AKE ++RD Y+VR G+ +II+E TGR E RR+S+G+HQA+EAKEG+ I ++ +A I
Sbjct: 318 AKELFKRDRDYLVREGQVIIIDEFTGRAMEGRRYSDGLHQAIEAKEGVHIAGENQTLATI 377
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T Q+ F++Y KLSGMTGTA+TE EF+ + + ++ +PTN P R+D + T + K
Sbjct: 378 TLQNYFRMYNKLSGMTGTAETEAAEFVHTYGLQIVVIPTNKPVQRIDHADLVYKTRKEKI 437
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
E + +E + G+PVLVG+ S+++SE LS+LLK +GI HNVLNA KY A+EAE VAQ
Sbjct: 438 EAIIKRIEELHAKGQPVLVGTISIKSSEELSELLKARGIKHNVLNA--KYHAKEAEIVAQ 495
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLA 406
AGR A+TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 AGRFGAVTIATNMAGRGTDIMLGGNPEFLA 525
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 174/390 (44%), Gaps = 75/390 (19%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G A Y VLK EV C EG +VK +GGL ++GT HESRRIDNQLRGRAGR
Sbjct: 525 AVAEVGSREAENYDEVLKKYEVQCKEEGEKVKSIGGLFILGTERHESRRIDNQLRGRAGR 584
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F D V + ++ E PI I + + Q E
Sbjct: 585 QGDPGESEFYLSLEDDLMRLFGSDRVKTV--MEKLGLPEGEPITHPMINKAIANAQTKIE 642
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+E+D+V+ QR +YD R + A E I + + E+I+ V
Sbjct: 643 SRNFGIRKNLLEYDDVMNKQRTAIYDSRNEAM--AKEDLKDSIIKMLH----EVIYSQVA 696
Query: 681 PLKHPRY---WSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF 737
Y W + L + L D + I IE++ E S+ I ++
Sbjct: 697 KRFVGEYKEDWDMSGL--------AEYLRDNYGYI--------IEDMTEYKSMSIEDY-- 738
Query: 738 PDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVV 797
S K + AIC A Y
Sbjct: 739 ------------------SKKIFDAIC--------------------------AQYDE-- 752
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+ES+ M+ +E+ +L + +D WR+HL ++ L + +R++G +NP+ EYK+
Sbjct: 753 KESKVGRDLMRRLEKYILFEVIDARWREHLKALDGLKEGIYLRAYGQKNPVVEYKLVSGE 812
Query: 858 FFISMLSATRRLTVESLVQYWSSPMESQEL 887
+ M+ + L + E +E+
Sbjct: 813 LYEQMVETIKEQATSFLFKVIIKNHEEEEV 842
>gi|406935806|gb|EKD69679.1| hypothetical protein ACD_47C00038G0003 [uncultured bacterium]
Length = 876
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/432 (47%), Positives = 293/432 (67%), Gaps = 30/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G I+EMKT +VTVNDYL +RD+
Sbjct: 83 MRHFDVQLIGGMVLHEGKISEMKTGEGKTLVATLPLYLNALEGRGAHLVTVNDYLVRRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++++FLGLSVG++ M P ERR++Y DITY N+E GFDYLRDN+A ++ V
Sbjct: 143 EWMGKIYKFLGLSVGIVINQMEPHERRASYGSDITYGTNNEFGFDYLRDNMAVGLDEQVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++AIVDEVDS+LIDE R PL+ISG A ++Y + +A+ L + + Y V+ K
Sbjct: 203 R---SFNYAIVDEVDSILIDEARTPLIISGPAENATSKYYEISTIAKQLRREIDYQVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
+V +TE+G+A E + ++ ++ ++N ALKA +R D Y+V++G+ +I
Sbjct: 260 ARTVAITEDGVARVEKLCNIPNWYESSNIKNVHLLNQALKAYNLFRLDRDYVVKDGEVII 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KI ++ +A IT Q+ F++Y KL+GMTGTA+
Sbjct: 320 VDEFTGRLMIGRRYSEGLHQAIEAKEGVKILRENQTLATITLQNYFRMYKKLAGMTGTAE 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR-LGRPVLV 335
TE +EF +++++P + +PTN IR D + + K++ E+ES+ + +P+LV
Sbjct: 380 TEAREFGEIYKLPTVVIPTNSDLIRQDAADVIYKNEKAKYKAVVDEIESVHKERKQPMLV 439
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+ENSE L D+LK++GI N+LNA KY +EAE V+QAGRK AITI+TNMAGRGTD
Sbjct: 440 GTISIENSEMLGDMLKKRGIACNILNA--KYHEKEAEIVSQAGRKGAITIATNMAGRGTD 497
Query: 396 IILGGNPKMLAK 407
I+LGGNP ML K
Sbjct: 498 IVLGGNPDMLVK 509
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ E EV + GGL++IGT HESRRIDNQLRGRAGRQGDPG TRF +SL+D++ + F
Sbjct: 532 CAAEKEEVLKAGGLYIIGTERHESRRIDNQLRGRAGRQGDPGLTRFFLSLEDDLLRLFGS 591
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
D L+ +ED+PIE + + Q E F IRK ++++D+V+ QR
Sbjct: 592 DRISG--LMETFGMEEDVPIESRLVSGAIESAQKRVEGRNFDIRKHVLKYDDVMNGQRVA 649
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
++ RQ IL + + + + + V++ +I +++ + KL+ +F A+
Sbjct: 650 IFKQRQEILE--TKDVTDIMIEMFEEVIEVMITAHINFEHYEEERDYLKLIDQFHAV 704
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+++ +++K +D W++HL M+ L + +R++G ++PL EYKI+G + F M++ +
Sbjct: 749 LQQYIMLKMIDDAWKEHLTAMDDLEEGIGLRAYGQKDPLVEYKIEGTQMFEEMINGIKES 808
Query: 870 TVESLVQYWSSPMESQE 886
+ L + P+E ++
Sbjct: 809 VIGMLFKL--RPVERED 823
>gi|269215857|ref|ZP_06159711.1| preprotein translocase, SecA subunit [Slackia exigua ATCC 700122]
gi|269130807|gb|EEZ61883.1| preprotein translocase, SecA subunit [Slackia exigua ATCC 700122]
Length = 929
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/452 (46%), Positives = 291/452 (64%), Gaps = 35/452 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG LH+G IAEMKT +VTVNDYLA+RD+
Sbjct: 91 LRHFDVQLIGGMALHEGQIAEMKTGEGKTLVSTLAGYLNAISGKGVHIVTVNDYLARRDS 150
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RV+R LG+SVGL+Q GM P R YR D+TY N+E GFDYLRDN+ +E+ V
Sbjct: 151 EWMGRVYRELGMSVGLVQNGMRPAARIPAYRADVTYGTNAEFGFDYLRDNMVTRAERRVQ 210
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R FAIVDEVDS+LIDE R PL+ISG +K Y A+ LV + + ++
Sbjct: 211 RG---HSFAIVDEVDSILIDEARTPLIISGAGTKAAETYRSFARAMRGLVPDIDFEIDEG 267
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARF---VMNALKAKEFYRRDVQYIVRNGKA 214
++ TE G+A E L +D++ +DP A+ + ALKA+ + RD +Y+V +G+
Sbjct: 268 KRTIIATEVGLAKIESRLGIDDIY--SDPSAQLANHLQQALKAQFLFHRDKEYVVSDGQV 325
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
I++E TGR+ E RR+SEG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTGT
Sbjct: 326 KIVDEFTGRIMEGRRYSEGLHQAIEAKEGVRIREENQTLATITLQNYFRLYEKLSGMTGT 385
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE+ EF +++++PV+ +P+N P R D + T K+ EVE R G+P L
Sbjct: 386 AMTEDAEFREIYKLPVVAIPSNKPVARKDEDDLVYRTIDAKFNAVADEVEERHRAGQPCL 445
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+ S+E+SE LS +L ++G+ H LNA K REA VAQAGR A+TI+TNMAGRGT
Sbjct: 446 VGTVSIESSERLSRILDKRGVAHETLNA--KNHEREAHIVAQAGRAGAVTIATNMAGRGT 503
Query: 395 DIILGGNPKMLAKKIIEDRLLLLLTREALNVE 426
DI+LGGNP++L + ++ R + L EA +V+
Sbjct: 504 DILLGGNPEVLMEDVLSQRGISL--EEATDVQ 533
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V R GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +SL+D++ ++F D
Sbjct: 548 EHEQVLRAGGLAVIGTERHESRRIDNQLRGRAGRQGDPGLTQFYLSLEDDLMRRFGGDRM 607
Query: 587 WAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
V ++SR EDMPI+ + + + Q E +F RK+++E+D+V+ +QR +Y
Sbjct: 608 DKVAAVMSRTEIPEDMPIQAGIVSKAIESAQHQVEALHFSARKTVLEYDDVMNLQRTAIY 667
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEI 674
+ R +IL G + S + ++ A+ D I
Sbjct: 668 EERNAILDGKDLSSRIETI-FVDAITDLI 695
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 785 LGDILIASYLNVV--QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
LGD ++ L V +E+ + +K++ V++ +D W HL M+ L + + +R+
Sbjct: 740 LGDAILDYLLGVYRSKEAALGEDALKKLGSQVMLNIIDVRWMAHLQEMDYLRTGIGLRAL 799
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYW-SSPMESQ 885
G R+PL EYK + F ++ + + ++++ ++P E+Q
Sbjct: 800 GQRDPLTEYKDEAHSAFAALTAGMYEDFMRTILRLQIAAPEEAQ 843
>gi|320530289|ref|ZP_08031357.1| preprotein translocase, SecA subunit [Selenomonas artemidis F0399]
gi|320137432|gb|EFW29346.1| preprotein translocase, SecA subunit [Selenomonas artemidis F0399]
Length = 873
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 76 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALSGRGVHMVTVNDYLARRDS 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 136 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYASDVTFGTNNEFGFDYLRDNMVLSESQMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A L +G YTV+ K
Sbjct: 196 R---DLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYAVMANAVRHLKEGEDYTVDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VRN + +I
Sbjct: 253 QKTVAPADSAVPKIEKLVGIQNLYAPENIELSHCFTAALRAKALMHRDRDYVVRNDEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 313 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYEKLAGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P R+D P + T K+ Q V+ + G+PVL+G
Sbjct: 373 TEENEFLKIYKLPVIVIPTNKPVQRIDHPDVIYKTKAAKYRAVGQSVKDIHASGQPVLIG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++L++ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 433 TTSITQSEEMSNVLRKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 490
Query: 397 ILG 399
LG
Sbjct: 491 KLG 493
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL ++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 493 GEGVEELGGLFIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 552
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + ++ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 553 SI--MDKLGMEEDEPIEHAIITRSVEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 610
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A GK+
Sbjct: 611 RRKILCG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPQGKL 668
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E+L E
Sbjct: 669 KKEELEALARDEIQELLEQLAE 690
>gi|304437838|ref|ZP_07397787.1| preprotein translocase subunit SecA, partial [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369195|gb|EFM22871.1| preprotein translocase subunit SecA [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 926
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 280/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 122 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALAGKGVHMVTVNDYLARRDS 181
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGL+VGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 182 EWMGKLYRYLGLTVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSESQMVQ 241
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 242 R---DLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 298
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V T+ + E + ++L+ EN + AL+AK RD Y+V+ + +I
Sbjct: 299 AKTVAPTDSAVPKIEKIVGISNLYAPENIELSHCFTAALRAKALMHRDRDYVVKGDEIII 358
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 359 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 418
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P RVD P + T GK+ Q V+ + G+PVL+G
Sbjct: 419 TEENEFLKIYKLPVIVIPTNKPIRRVDEPDVIYKTKAGKYRAVGQAVKEIHETGQPVLIG 478
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S +LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 479 TTSIVQSEEMSHVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 536
Query: 397 ILG 399
LG
Sbjct: 537 KLG 539
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 162/338 (47%), Gaps = 67/338 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL++IGT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 539 GEGVEELGGLYIIGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 598
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ DED PIE I R + Q E F IRK VLE YD
Sbjct: 599 GI--MDRLGMDEDEPIEHAIITRSVEHAQKKVEARNFDIRK------HVLE------YD- 643
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
+ +QQ E+I+G + + + L +A+ I+ D
Sbjct: 644 ---------DVMNQQ---------REVIYG-----ERKKILLGENLRDNILAMVKHIIKD 680
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
A + + L +L L D Y P +G R K + L+ A+ D+
Sbjct: 681 EMAQYANEKLYPEEWQLDALIE-DAEKVYAP---------KG-RLKKAELE---ALARDE 726
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ + L + Y N +E + + M+E+E+ V+++ +D W DHL
Sbjct: 727 IQEE-------------LEKVAEEGYKN--RELMFGEENMRELEKVVMLRVVDQKWMDHL 771
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+M+ L +N+R++G RNPL EYKI+ F M +A
Sbjct: 772 DHMDMLREGINLRAYGQRNPLVEYKIEALTMFEEMEAA 809
>gi|313895438|ref|ZP_07828995.1| preprotein translocase, SecA subunit [Selenomonas sp. oral taxon
137 str. F0430]
gi|312976333|gb|EFR41791.1| preprotein translocase, SecA subunit [Selenomonas sp. oral taxon
137 str. F0430]
Length = 880
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALSGRGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYASDVTFGTNNEFGFDYLRDNMVLSESQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A L +G YTV+ K
Sbjct: 203 R---DLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYAVMANAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VRN + +I
Sbjct: 260 QKTVAPADSAVPKIEKLVGIQNLYAPENIELSHCFTAALRAKALMHRDRDYVVRNDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYEKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P R+D P + T K+ Q V+ + G+PVL+G
Sbjct: 380 TEENEFLKIYKLPVIVIPTNKPVQRIDHPDVIYKTKAAKYRAVGQSVKEIHASGQPVLIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++L++ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSNVLRKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL ++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEELGGLFIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + ++ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 SI--MDKLGMEEDEPIEHAIITRSVEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A GK+
Sbjct: 618 RRKILCG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPQGKL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E++ E
Sbjct: 676 KKEELEALARDEIQELLEQVAE 697
>gi|365873982|ref|ZP_09413515.1| preprotein translocase, SecA subunit [Thermanaerovibrio velox DSM
12556]
gi|363984069|gb|EHM10276.1| preprotein translocase, SecA subunit [Thermanaerovibrio velox DSM
12556]
Length = 882
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/433 (49%), Positives = 284/433 (65%), Gaps = 34/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH+G IAEMKT V+TVNDYLA+RDA
Sbjct: 81 LRHFDVQLMGGMALHEGKIAEMKTGEGKTLVATLSVALNALEGKGVHVITVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+R LGL+VG+I+ M E+R + YR DITY NSE GFDYLRDN+A + V
Sbjct: 141 EWMGPVYRGLGLTVGVIEPFMSQEDRFAAYRADITYGTNSEFGFDYLRDNMALSKASQVQ 200
Query: 98 R--WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVE 155
R W + +VDEVDS+LIDE R PL+ISG + V Y +A A L +G + V+
Sbjct: 201 RGHW-----YCLVDEVDSILIDEARTPLIISGPSEDSVEPYRIADSCARALRKGEDFEVD 255
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDEN--DPWARFVMNALKAKEFYRRDVQYIVRNGK 213
K +V LTE GIA E L+ +L+ + A V+ ALKA ++RDV Y+V++G+
Sbjct: 256 EKERNVALTERGIARCEEILKVPNLFSDYGMSELAHKVIQALKAHHLFQRDVHYVVKDGE 315
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
+I++E TGR+ RR+S+G+HQA+EAKE ++I +S +A IT Q+ F++Y KLSGMTG
Sbjct: 316 IVIVDEFTGRLMFGRRYSDGLHQAIEAKERVQIGKESQTLATITLQNYFRMYRKLSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA TE +EF +++ M V+ +PT+ P IRVD P F T R K+ VE R G+PV
Sbjct: 376 TAATEAEEFKEIYGMDVVVIPTHRPMIRVDHPDVIFRTQREKYNAVADFVEERHRAGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ S+ENSE +S LLK + IPH+VLNA K+ +EA VAQAGR A+T++TNMAGRG
Sbjct: 436 LVGTASIENSERVSKLLKARKIPHHVLNA--KFHDKEAAIVAQAGRFGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGNPK LA
Sbjct: 494 TDILLGGNPKFLA 506
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L V C E +V GGL ++GT HESRRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 524 YRVILDRFTVQCEEERKKVLDAGGLCILGTERHESRRIDNQLRGRAGRQGDPGESRFFIS 583
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + L+S++ +E +E + + + Q E+ +F IRK L+
Sbjct: 584 LEDDLLRLFGSERIQG--LMSKLGMEEGESVEHSFLTKAIENAQRKVEQMHFDIRKQLLA 641
Query: 633 FDEVLEVQRKHVYDLRQSILTGAN 656
+D V+ QR+ VY RQ ILT N
Sbjct: 642 YDNVMNQQREAVYKERQEILTDQN 665
>gi|169335348|ref|ZP_02862541.1| hypothetical protein ANASTE_01760 [Anaerofustis stercorihominis DSM
17244]
gi|169258086|gb|EDS72052.1| preprotein translocase, SecA subunit [Anaerofustis stercorihominis
DSM 17244]
Length = 832
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 286/430 (66%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHF VQ+IGG +LH G+IAEMKT +VTVNDYLA+RD+
Sbjct: 79 LRHFKVQLIGGIILHQGNIAEMKTGEGKTLMATLPAYLNALDGKGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW ++ FLGL+VGLI G+ EE+++ Y DITY N+E GFDYLRDN+ +++V
Sbjct: 139 EWNGKMFNFLGLNVGLIVHGLEFEEKKAAYAADITYGTNNEFGFDYLRDNMVTEMDEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG ++ RY A + L + Y V+ K
Sbjct: 199 R---DLNYAIVDEVDSILIDEARTPLIISGSGNESTKRYYDANAFIKTLKKEEDYAVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
+ LTE+GIA AE A +L D N+ + +N AL+A RD Y+VR+G+ LI
Sbjct: 256 EKTCNLTEKGIAKAERAFNIENLSDINNMELQHHINQALRANTLMFRDRDYVVRDGEVLI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKEG+K++ +SV +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 316 VDEFTGRIMEGRRYSEGLHQAIEAKEGVKVERESVTLATITFQNYFRMYNKLAGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++ M V++VPTN P IR D+ F T +GK + E++ G+P+LVG
Sbjct: 376 TEEEEFKEIYNMNVLQVPTNKPLIREDMRDAVFTTKKGKEKAIINEIKERHDKGQPILVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E+SE LS LLK++GI H+VLNA K+ +EAE +A AG+ +TISTNMAGRGTDI
Sbjct: 436 TIAIEDSERLSKLLKREGIKHSVLNA--KFHEKEAEIIANAGQMGTVTISTNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
+LG K L
Sbjct: 494 VLGEGVKELG 503
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH++GT HESRRIDNQLRGR+GRQGDPGS++F +SL+D++ + F +
Sbjct: 496 GEGVKELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSQFFISLEDDLMRLFGGERIQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ S+ +ED +E + R + Q E FGIRK ++++D+V+ QRK +YD
Sbjct: 556 --NFASKTNLEEDEALESRMLTRTIENAQKQIEGKNFGIRKYVLQYDDVMNKQRKVIYDQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
R+ +L G E S I + + +++D I+ W+ DK+ + I
Sbjct: 614 RKKVLKG--EDVSDAIREMIDSIIDNIVESFTTEEHFTDNWNYDKIKENIFNI 664
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
D W +H+ NM++L +N+R++G +P++ Y +G F M + TV+ L
Sbjct: 718 DSNWMEHIDNMDQLKQGINLRAYGQVDPVQAYTKEGFGMFEEMNEVIKEDTVKYL 772
>gi|312109505|ref|YP_003987821.1| preprotein translocase subunit SecA [Geobacillus sp. Y4.1MC1]
gi|336233898|ref|YP_004586514.1| preprotein translocase subunit SecA [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718626|ref|ZP_17692808.1| preprotein translocase, secA subunit [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214606|gb|ADP73210.1| preprotein translocase, SecA subunit [Geobacillus sp. Y4.1MC1]
gi|335360753|gb|AEH46433.1| preprotein translocase, SecA subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368228|gb|EID45501.1| preprotein translocase, secA subunit [Geobacillus thermoglucosidans
TNO-09.020]
Length = 837
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/427 (49%), Positives = 279/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G+IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YKVQIMGGVVLHEGNIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLATRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGLSVGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GKLYEFLGLSVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+AI+DEVDS+LIDE R PL+ISG A K Y A L + + YT + K S
Sbjct: 200 -PLHYAIIDEVDSILIDEARTPLIISGTAQKSTKLYIQANAFVRTLKKDVDYTYDEKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D +N ALKA RDV Y+V +GK +I++
Sbjct: 259 VQLTEEGITKAEKAFGIDNLFDLKHVTLNHHINLALKAHVAMHRDVDYVVEDGKVVIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMRGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P F T GK+ +++ G+PVLVG+ S
Sbjct: 379 EEFRNIYNMQVVVIPTNKPVIREDRPDLIFRTMEGKFRAVVEDIAQRHAKGQPVLVGTVS 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELLSNMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 S--MMDRLGMDDSQPIQSKMVTKAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L E+ I + +Q+V++ ++ + P W+L ++
Sbjct: 614 RYEVLDA--ENLRDIIEKMIQSVIERVVNTYTPKEELPEDWNLKGIV 658
>gi|160902328|ref|YP_001567909.1| preprotein translocase subunit SecA [Petrotoga mobilis SJ95]
gi|160359972|gb|ABX31586.1| preprotein translocase, SecA subunit [Petrotoga mobilis SJ95]
Length = 824
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 279/430 (64%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G I EMKT + T NDYLA+RDA
Sbjct: 76 MRHFDVQLMGGIALHEGKITEMKTGEGKTLVATLPIYLNALTGKNVHLATHNDYLAKRDA 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM ++ +LGLSVG IQ M E+R+ Y+ DITY +E GFDYLRDNL + V
Sbjct: 136 NWMGPIYEYLGLSVGYIQANMDKEDRKKAYQADITYGTANEFGFDYLRDNLVYENTDKVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDE DS+LIDE R PL+ISG + Y A +A+ + YT++ K
Sbjct: 196 R---GHYFAIVDEADSILIDEARTPLIISGPSDTPSELYRRFASLAKKFIVEKDYTIDEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LTEEGI+ AE L ++L+D N + ++NALKA F++RD YIVR+G+ +I
Sbjct: 253 QKTLALTEEGISKAEKLLSVDNLYDPSNIKYLFHLLNALKAINFFKRDKDYIVRDGEVVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KI+ +SV A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 313 VDEFTGRLLAGRRYSEGLHQAIEAKEGVKIKEESVTFATITFQNYFRMYEKLSGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF ++ VI +PTN P IR D F T + K++ E+ + G+PVLVG
Sbjct: 373 TEEDEFKAIYNTEVIVIPTNEPVIREDKNDLIFKTEKEKYQAIIDEIAKRNQKGQPVLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ENSE +S++LK++GI H VLNA KY REAE +AQAG K A+TI+TNMAGRGTDI
Sbjct: 433 TTSIENSETISEMLKKRGIKHEVLNA--KYHEREAEIIAQAGEKNAVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 491 KLGEGVKELG 500
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQL GR+GRQGDPG +RF++S +D++ + F +
Sbjct: 493 GEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFIISFEDDVLRLFGGER-- 550
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ + +E PIE + R + Q E +F IRK L EFD V++ QR +Y+
Sbjct: 551 MKNMMTALKIEEGQPIEHKMLSRVIRDAQKKIEGIHFSIRKRLYEFDSVMDKQRSVIYNH 610
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY--WSLDKLLKEFIAIA 701
R IL N I + VV+ I+ + D ++ +Y S+ + LK+++ I+
Sbjct: 611 RDWILEQGN--YDDHIKEIFMDVVERIVESSWDEVEE-KYDKSSISEKLKQYLIIS 663
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+V + V+++ +D WR HL + L AV +RS+G ++P+ E+K + F M+ +
Sbjct: 698 KVAKFVMLRIIDEKWRHHLDAIEALKEAVGLRSYGQKDPVMEFKKESYLLFDQMVDS 754
>gi|402829693|ref|ZP_10878567.1| preprotein translocase, SecA subunit [Slackia sp. CM382]
gi|402283689|gb|EJU32200.1| preprotein translocase, SecA subunit [Slackia sp. CM382]
Length = 937
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 286/443 (64%), Gaps = 33/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG LH+G IAEMKT +VTVNDYLA+RD+
Sbjct: 99 LRHFDVQLIGGMALHEGQIAEMKTGEGKTLVSTLAGYLNAISGKGVHIVTVNDYLARRDS 158
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RV+R LG+SVGL+Q GM P R YR D+TY N+E GFDYLRDN+ +E+ V
Sbjct: 159 EWMGRVYRELGMSVGLVQNGMRPAARIPAYRADVTYGTNAEFGFDYLRDNMVTRAERRVQ 218
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R FAIVDEVDS+LIDE R PL+ISG +K Y A+ LV + + ++
Sbjct: 219 RG---HSFAIVDEVDSILIDEARTPLIISGAGTKAAETYRSFARAMRGLVPDIDFEIDEG 275
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARF---VMNALKAKEFYRRDVQYIVRNGKA 214
++ TE G+A E L +D++ +DP A+ + ALKA+ + RD +Y+V +G+
Sbjct: 276 KRTIIATEVGLAKIESRLGIDDIY--SDPSAQLANHLQQALKAQFLFHRDKEYVVSDGQV 333
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
I++E TGR+ E RR+SEG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTGT
Sbjct: 334 KIVDEFTGRIMEGRRYSEGLHQAIEAKEGVRIREENQTLATITLQNYFRLYEKLSGMTGT 393
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE+ EF +++++PV+ +P+N P R D + T K+ EVE R G+P L
Sbjct: 394 AMTEDAEFREIYKLPVVAIPSNKPVARKDEDDLVYRTIDAKFNAVADEVEERHRAGQPCL 453
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+ S+E+SE LS +L ++G+ H LNA K REA VAQAGR A+TI+TNMAGRGT
Sbjct: 454 VGTVSIESSERLSRILDKRGVAHETLNA--KNHEREAHIVAQAGRAGAVTIATNMAGRGT 511
Query: 395 DIILGGNPKMLAKKIIEDRLLLL 417
DI+LGGNP++L + ++ R + L
Sbjct: 512 DILLGGNPEVLMEDVLAQRGISL 534
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V R GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +SL+D++ ++F D
Sbjct: 556 EHEQVLRAGGLAVIGTERHESRRIDNQLRGRAGRQGDPGLTQFYLSLEDDLMRRFGGDRM 615
Query: 587 WAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
V ++SR EDMPI+ + + + Q E +F RK+++E+D+V+ +QR +Y
Sbjct: 616 DKVAAVMSRTEIPEDMPIQAGIVSKAIESAQHQVEALHFSARKTVLEYDDVMNLQRTAIY 675
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEI 674
+ R +IL G + S + ++ A+ D I
Sbjct: 676 EERNAILDGKDLSSRIETI-FVDAITDLI 703
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 785 LGDILIASYLNVV--QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
LGD ++ L V +E+ + +K++ V++ +D W HL M+ L + + +R+
Sbjct: 748 LGDAILDYLLGVYRSKEAALGEDALKKLGSQVMLNIIDVRWMAHLQEMDYLRTGIGLRAL 807
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYW-SSPMESQ 885
G R+PL EYK + F ++ + + ++++ ++P E+Q
Sbjct: 808 GQRDPLTEYKDEAHSAFAALTAGMYEDFMRTILRLQIAAPEEAQ 851
>gi|257063622|ref|YP_003143294.1| protein translocase subunit secA [Slackia heliotrinireducens DSM
20476]
gi|256791275|gb|ACV21945.1| protein translocase subunit secA [Slackia heliotrinireducens DSM
20476]
Length = 920
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/434 (47%), Positives = 282/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG LH+G IAEMKT VVTVNDYLA+RD+
Sbjct: 79 LRHFDVQLIGGMALHEGQIAEMKTGEGKTLVSTLAGYLNALSNDGVHVVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RV++FLG+ VGLIQ GM P++R +Y+ D+TY N+E GFDYLRDN+ + V
Sbjct: 139 EWMGRVYKFLGMEVGLIQNGMRPKQRIPSYKADVTYGTNAEFGFDYLRDNMVTRAGSRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG K Y A+ L + Y ++
Sbjct: 199 RG---HNFAIVDEVDSILIDEARTPLIISGAGVKAADTYKNFARAVRGLQRDQDYVLDEA 255
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ TE G+A E L +D++ D + A + ALKA+ + D+ Y+ NG+ I
Sbjct: 256 KRTIVATEIGLAKIEARLGIDDIYADPSAQLANHLQQALKAEYVFHLDIDYVKTNGEIKI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 316 VDEFTGRIMEGRRYSEGLHQALEAKEGVRIREENQTLATITLQNYFRLYKKLSGMTGTAM 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE+ EF +++ +PV+ +P N P IR+D + T +GK+ EVE G+P LVG
Sbjct: 376 TEDAEFRQIYNLPVVAIPPNKPVIRIDENDLIYRTLKGKYNAVADEVEQRHAAGQPCLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LS +L ++G+PH LNA K REA VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TVSIESSELLSRILDKRGVPHETLNA--KNHEREANIVAQAGRVGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKII 410
+LGGNP++LA+ I+
Sbjct: 494 LLGGNPEILAEDIL 507
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 9/164 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + S E +V GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +SL+D
Sbjct: 525 ALQQAKAITSAEHDQVIAAGGLAVIGTERHESRRIDNQLRGRAGRQGDPGLTQFYLSLED 584
Query: 576 EMFQKFSFDTSWAVDLISRITND----EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
++ ++F D +D I R+ EDMPI+ + + + Q E +F RKS++
Sbjct: 585 DLMRRFGSDR---MDSIGRMMEKTDIPEDMPIQHSMVSKAIESAQHQVEAMHFAARKSVL 641
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
E+D+V+ +QR +YD R +IL G + S++I +Q V+ ++
Sbjct: 642 EYDDVMNLQRTAIYDERNAILDGKD--MSERIESIVQDAVEAVV 683
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+ +E V+++ +D W +HL M+ L + + +R+ G R+PL EYK + F ++ S
Sbjct: 752 MRGLESQVMLRIIDVRWMNHLQEMDYLRTGIGLRAIGQRDPLVEYKGEAHAAFANLTSG 810
>gi|218291022|ref|ZP_03495063.1| preprotein translocase, SecA subunit [Alicyclobacillus
acidocaldarius LAA1]
gi|218239040|gb|EED06245.1| preprotein translocase, SecA subunit [Alicyclobacillus
acidocaldarius LAA1]
Length = 796
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 273/422 (64%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH+G +AEMKT VVTVNDYLA+RDAE
Sbjct: 79 RHFDVQLMGGIVLHEGRVAEMKTGEGKTLVATLPAYLNALTGEGVHVVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ +VHRFLGL+VG M P ++R YR DITY N+E GFDYLRDN+ + E +V R
Sbjct: 139 YTGKVHRFLGLTVGYNGPDMTPAQKREAYRADITYGTNNEFGFDYLRDNMVMSLEDMVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A K Y A + L G Y V+ K
Sbjct: 199 ---KLHYAIVDEVDSILIDEARTPLIISGPAEKSDDLYFRADMLVRRLKPGEDYEVDEKM 255
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LTE G+ AE ++L+D EN + ALKA +RD Y+V + I+
Sbjct: 256 RTANLTESGVKKAEQFFRVDNLFDPENVTLMHHITQALKAHGLMKRDKDYVVIGDEVHIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+K+Q +S +A IT Q+ F++Y KL+GMTGTAKT
Sbjct: 316 DEFTGRILHGRRYSEGLHQAIEAKEGVKVQNESKTLATITLQNYFRMYEKLAGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEF++++ M V+ +PTN P IRVDL + T R K+ +EV G+PVLVG+
Sbjct: 376 EEKEFIEIYGMDVVVIPTNRPMIRVDLDDVVYKTERAKFRAVVEEVARRHAKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TS+E SE LS +L ++GIPH VLNA K+ REAE VA AG++ +TI+TNMAGRGTDII
Sbjct: 436 TSIEKSELLSRMLHERGIPHQVLNA--KHHEREAEIVALAGQRGMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 495 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLLRLFGSDNIK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ DED PIE + + Q E + +RK ++ +D+VL QR+ +Y
Sbjct: 555 R--LMDRLGLDEDQPIEQKMLTNAIERAQKKVEGNNYDLRKHVLRYDDVLNKQREVIYRQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ IL E + ++ ++D ++ + P W L L++
Sbjct: 613 RRQILE--REDLRSIVEGMLEDLIDHMLEVYCSEEQVPEDWDLQALIQ 658
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M ++ER VL++ +D W DH+ M++ +V++RS+G +PL Y+ +G F +M+ +
Sbjct: 706 MHQLERLVLLRAVDSKWMDHIDAMDQFRQSVHLRSYGQADPLVIYQKEGFEMFEAMIHS 764
>gi|379718116|ref|YP_005310247.1| protein SecA [Paenibacillus mucilaginosus 3016]
gi|378566788|gb|AFC27098.1| SecA [Paenibacillus mucilaginosus 3016]
Length = 903
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/422 (48%), Positives = 281/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLH+G IAEM+T VVTVNDYLAQRD+
Sbjct: 81 RHYDVQLIGGMVLHEGKIAEMRTGEGKTLVGTLPVYLNALAGKGVHVVTVNDYLAQRDSA 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++H FLGL+VG+ M E +++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQLHNFLGLTVGVNLSNMSHEAKQAAYACDITYGTNNEFGFDYLRDNMVVYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P + ++DEVDS+L+DE R PL+ISG+A+K Y +A +V L + Y +++K
Sbjct: 201 ---PLSYCVIDEVDSILVDEARTPLIISGQAAKSTEMYLIADQVVSRLKEEEDYIIDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G+A E + +L+D E+ + ALKA +RDV Y+V G+ +I+
Sbjct: 258 RSVTLTEAGVAKVERSFGIENLFDHEHVTINHHIQQALKAHAIMKRDVDYVVSEGEIMIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE L++Q +S+ +A IT Q+ F++Y KLSGMTGTAKT
Sbjct: 318 DEFTGRLMTGRRYSEGLHQAIEAKEHLQVQNESMTLATITLQNYFRMYRKLSGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + VI +PTN P IR D+P + + + K+ E+ + +PVLVG+
Sbjct: 378 EEEEFKKIYGLEVITIPTNKPTIRQDIPDVVYKSVQSKFRAVVNEIAERHKNKQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++GIPH VLNA KY A EAE V++AG+ A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSEVLSEMLKKKGIPHKVLNA--KYHAEEAEIVSRAGQLGAVTIATNMAGRGTDIM 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 161/343 (46%), Gaps = 82/343 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F +
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLEDELMRRFGAENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ +ED PIE I + + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 557 G--MMDRLGFEEDQPIESKLISKAIESAQKRVEGNNFDVRKVVLQYDDVMNQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ++ N + EI+ G + P+ +D+++ A
Sbjct: 615 RREVIESEN--------------IREIVMGMITPV-------IDRIVDAHCA-------- 645
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
E+LPE L+ + C+
Sbjct: 646 --------------EDLPE---------------------------EWDLQAIVDYCNGT 664
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDD-------VYMKEVERAVLVKTLD 820
G+ +A L K D IA YL V Y++ +M+E E+ VL++ +D
Sbjct: 665 FLHEGQLKA-EELEGKEKED--IAEYLKGVLTRLYEEREAAIGAEFMREFEKVVLLRAVD 721
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
W DH+ M++L +++R++G +PL EY+ +G F M+
Sbjct: 722 SKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGYEMFQEMI 764
>gi|239828321|ref|YP_002950945.1| preprotein translocase subunit SecA [Geobacillus sp. WCH70]
gi|239808614|gb|ACS25679.1| preprotein translocase, SecA subunit [Geobacillus sp. WCH70]
Length = 837
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/427 (49%), Positives = 281/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G+IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YKVQIMGGIVLHEGNIAEMKTGEGKTLTATMPVYLNALTGKGVHVVTVNEYLATRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGL++GL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GKLYEFLGLTIGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+AI+DEVDS+LIDE R PL+ISG A K A Y A L + + YT + K S
Sbjct: 200 -PLHYAIIDEVDSILIDEARTPLIISGTAQKSTALYIQANAFVRTLKKDVDYTYDEKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D +N AL+A RDV Y+V +GK +I+++
Sbjct: 259 VQLTEEGITKAEKAFGIDNLFDLKHVTLNHHINLALRAHVTMHRDVDYVVEDGKVVIVDQ 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMRGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P F T GK+ +++ G+PVLVG+ S
Sbjct: 379 EEFRNIYNMQVVVIPTNKPVIREDRPDLIFRTMEGKFRAVVEDIAQRHAKGQPVLVGTVS 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELLSNMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGRAGRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRAGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 S--MMDRLGMDDSQPIQSKMVTKAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L N I + +Q+V++ ++ + + P W+L ++
Sbjct: 614 RYEVLDSDN--LRGIIEKMIQSVIERVVNAHTPKEELPEEWNLKGII 658
>gi|262066345|ref|ZP_06025957.1| preprotein translocase, SecA subunit [Fusobacterium periodonticum
ATCC 33693]
gi|291379909|gb|EFE87427.1| preprotein translocase, SecA subunit [Fusobacterium periodonticum
ATCC 33693]
Length = 877
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/453 (46%), Positives = 293/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGKGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y+ DITY NSE GFDYLRDN+ ++ + V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKRSYQSDITYGTNSEFGFDYLRDNMVSDLKNKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y V+ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQVSFQVVSMLTRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ +V LTE+G+ E L+ ++L+ E+ F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRTVVLTEKGVKRVEKILKIDNLYSPEHVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+ I A++ +
Sbjct: 318 LKAKELFKRDRDYLVRENGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVNIAAENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + VI +PTNLP IR D + T
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVIVIPTNLPVIRRDNADLVYKTKN 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
GK + +E+++ G+PVLVG+ S+++SE LS+LLK++G+PHNVLNA K+ A+EAE
Sbjct: 438 GKIKSIIDRIEALYEKGQPVLVGTISIKSSEELSELLKKRGVPHNVLNA--KFHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D
Sbjct: 543 VLAKYQEQCRKEKEQVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLED 602
Query: 576 EMFQKFSFD--TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
++ + F + + W + R+ ED PI I + Q E FGIRKSL+EF
Sbjct: 603 DLMRLFGSERVSVW----MERLKLPEDEPITHGMINSAIEKAQKKIEARNFGIRKSLLEF 658
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
D+V+ +QRK +Y+ R L ++ +I ++ V+ ++ +H W +D L
Sbjct: 659 DDVMNLQRKAIYENRNEAL--GTDNLKDKILGMLKDVITAKVYEKF-AAEHKEDWDIDGL 715
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +E+ +L++ +D WR+HL ++ L ++ +R++G R+P+ EYKI + F M+S
Sbjct: 765 LRNLEKYILLEVVDNKWREHLKALDGLRESIYLRAYGQRDPVTEYKIISSQIFEEMISNI 824
Query: 867 RRLTVESLVQ 876
+ T L +
Sbjct: 825 KEQTTSFLFK 834
>gi|86157163|ref|YP_463948.1| protein translocase subunit secA [Anaeromyxobacter dehalogenans
2CP-C]
gi|85773674|gb|ABC80511.1| protein translocase subunit secA [Anaeromyxobacter dehalogenans
2CP-C]
Length = 962
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/431 (48%), Positives = 280/431 (64%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 99 MRHFDVQLIGGAVLHSGKIAEMKTGEGKTLVATLPCVLNALSGRGVHVVTVNDYLARRDA 158
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RF GLS G+I G+ ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 159 EWMGRLYRFCGLSTGVIVHGLTDRERQQAYGSDITYGQNNEFGFDYLRDNMKFRLQDYVQ 218
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG + + Y V +++ +TV+ K
Sbjct: 219 ---GELNFAIVDEVDSILIDEARTPLIISGPSDESSELYARVNAVIPSMIRDQDFTVDEK 275
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ ++ +T+ G+ E L +L+ E V AL+A YR +V Y+V+ G+ LI
Sbjct: 276 SRTIVMTDAGVEKMEKKLSVQNLYAPEEIETLHHVEQALRAHHIYRNEVDYVVKEGEVLI 335
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A I++Q+ F++Y KL+GMTGTA
Sbjct: 336 VDEFTGRLMPGRRWSDGLHQAVEAKEGVKIEAENQTLATISFQNYFRMYSKLAGMTGTAD 395
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K + + V+ +PTN N+R D + T K++ E+E G+PVLVG
Sbjct: 396 TEAEEFAKTYNIDVVVIPTNQKNVRKDAEDVVYKTEGEKFDALCTEIEQRHGTGQPVLVG 455
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SV SE +S LLK++G+PH+VLNA K+ REAE VAQAGRK A+TISTNMAGRGTDI
Sbjct: 456 TVSVAKSEVVSALLKRRGVPHSVLNA--KHHQREAEIVAQAGRKGAVTISTNMAGRGTDI 513
Query: 397 ILGGNPKMLAK 407
ILGGN +M+AK
Sbjct: 514 ILGGNAEMMAK 524
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 42/350 (12%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + + E EV +LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+ F +SL+D
Sbjct: 557 ALEKLKAQTAAEHEEVVKLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSIFYLSLED 616
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ + F D L+ R+ + IE + + + G Q E + F IRK+L+E+D+
Sbjct: 617 ELMRIFGSDRIQG--LMGRMGMKDGEQIEHPWLTKAIEGAQKKVEAHNFDIRKNLLEYDD 674
Query: 636 VLEVQRKHVYDLRQSIL---TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
V+ QR+ +Y LR+ +L G ++ + + E +F D +H LD
Sbjct: 675 VMNQQRRSIYRLRRMVLGFGAGVPVVEYEEDPKTRKKTRHEQVFTWADAGEH----MLDL 730
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
+ + + G A + L +I E + + P + +P R +
Sbjct: 731 VEDLVVEMVGASCPSRVADWDLEGLSANIRE-----QFGVEMKFTPPVGRPQEARRALEE 785
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
+ ++ L YRA L K I + ++ E+
Sbjct: 786 QVFNVVEKL------------YRAKEEELGKDPEGIPV----------------LRRWEQ 817
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+ ++ +D W+DHL++M+ L + +R +G ++P +EYK +G F+ M
Sbjct: 818 YLYLQAIDQQWKDHLLSMDHLRQGIGLRGYGQKDPKQEYKKEGYEMFVQM 867
>gi|433455719|ref|ZP_20413792.1| preprotein translocase subunit SecA [Arthrobacter crystallopoietes
BAB-32]
gi|432197288|gb|ELK53682.1| preprotein translocase subunit SecA [Arthrobacter crystallopoietes
BAB-32]
Length = 912
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/440 (49%), Positives = 289/440 (65%), Gaps = 30/440 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 80 LRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALSGKGVHVVTVNDYLAEYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+RFLGL+ G I G P RR Y DITY N+E GFDYLRDN+A + ++LV
Sbjct: 140 DLMGRVYRFLGLTSGCILSGQTPAVRREQYSSDITYGTNNEFGFDYLRDNMAWSKDELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R +FAIVDEVDS+LIDE R PL+ISG+AS DV R Y ++V + L Y V+
Sbjct: 200 RG---HNFAIVDEVDSILIDEARTPLIISGQASGDVNRWYTEFSRVVQRLQADKDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y+V G+ L
Sbjct: 257 KKRTVGVLESGIEKVEDYLGIDNLYESANTPLIGFLNNAIKAKELFKRDKDYVVLKGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A +T Q+ F+LY KLSGMTGTA
Sbjct: 317 IVDEHTGRILAGRRYNEGMHQAIEAKEGVEIKAENQTMATVTLQNYFRLYDKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN P RVD P + K++ +++ + G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVPIPTNKPMARVDQPDLIYKNELAKFDAVVKDIAARHEDGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS L +QGI H VLNA K AREA VAQAGRK A+T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSKQLAKQGIRHEVLNA--KNHAREAAIVAQAGRKGAVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLAKKIIEDRLL 415
I+LGGN + A +E R L
Sbjct: 495 IMLGGNAEFNAVAELERRGL 514
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 ALEAAQNAVKAEHEEVLALGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ + + SR+ + D+ +E + + + Q E RK+++++D+
Sbjct: 590 DLMRLFNSGAAERIMNSSRMPD--DVALESKMVSKAIENAQGQVEGRNAEQRKNVLKYDD 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIF-----GNVDPLKHPRYWS 689
VL QR+ +Y R+ IL G + +++ +++ VV ++ G+ D + + W+
Sbjct: 648 VLNRQREAIYGDRRRILEG--DDLHEKVGFFLEDVVTAMVNEATAEGHGDDWDYEQLWT 704
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 771 NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
GR + T + LR+ + I A +E M+E+ER V++ + W++HL M
Sbjct: 724 GGRSKITADFLREEI--ISDAKVAYAAREEALGSATMRELERRVVLSVIGRKWQEHLYEM 781
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ L + +R+ R+PL EY+ +G F +M+ A R ++
Sbjct: 782 DYLKEGIGLRAMAQRDPLVEYQREGFTMFQTMMEAIREESI 822
>gi|379763607|ref|YP_005350004.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
MOTT-64]
gi|378811549|gb|AFC55683.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
MOTT-64]
Length = 942
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 287/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMQKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V F G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRADQSDLIYKTEEAKYIAVVDDVVERFEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ +PHNVLNA K+ +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRVPHNVLNA--KFHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEA--MLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFG 677
E+ +Q ++ VV + G
Sbjct: 663 --ENLKEQALDMVRDVVTAYVNG 683
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLEGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+++ E
Sbjct: 820 KEESVGFLFNVTVEAVPTPQVAPVQAPE 847
>gi|227494987|ref|ZP_03925303.1| IISP family type II (general) secretory pathway protein SecA
[Actinomyces coleocanis DSM 15436]
gi|226831439|gb|EEH63822.1| IISP family type II (general) secretory pathway protein SecA
[Actinomyces coleocanis DSM 15436]
Length = 909
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/433 (50%), Positives = 281/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQ+IGGA LH G+IAEMKT VVTVNDYLA +
Sbjct: 79 MRPFRVQLIGGAALHQGNIAEMKTGEGKTLVATLPSYLRALTGDGVHVVTVNDYLASYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+R+LGL+ G I G P++RR Y CDITY N+E GFDYLRDN+A E++V
Sbjct: 139 DIMGRVYRYLGLTCGCILAGQTPDQRRKQYNCDITYGTNNEFGFDYLRDNMAQVPEEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDV-ARYPVAAKVAELLVQGLHYTVEL 156
R +F IVDEVDS+LIDE R PL+ISG A+ DV A Y + + + G Y V+
Sbjct: 199 RG---HNFVIVDEVDSILIDEARTPLIISGPATGDVNAWYSTFSLLVLKMKAGTDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWDEN-DPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L +L+D P F+ NALKAKE ++RD YIV +G+ L
Sbjct: 256 KKRTVGVLEPGIEFIEDQLGIENLYDAAYTPLIGFLNNALKAKELFKRDRDYIVADGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE +KIQA++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKENVKIQAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF+ +++ VI +PTN P IR D P F T GK +++ R G+PV
Sbjct: 376 TAETEAAEFVSTYKIGVIPIPTNRPMIRKDQPDLIFPTFEGKMRAVIEDIVERHRKGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE +S +LK++G+PH VLNA K REA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSELVSRMLKERGVPHEVLNA--KQHKREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGNP+ LA
Sbjct: 494 TDIMLGGNPEHLA 506
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 98/152 (64%), Gaps = 4/152 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + F
Sbjct: 539 VAAEHDEVLELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMR--LF 596
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
++ A +++ ED+PIE + + + Q E F IRK+++++D+V+ QR+
Sbjct: 597 NSGLAQRIMASGAYPEDLPIESKMVSKSIASAQAQVEGRNFEIRKNVLKYDDVMTGQRET 656
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+Y RQ +L G E+ Q+ ++M+ ++ ++
Sbjct: 657 IYGERQRVLNG--ENMEPQMKRFMEIIIANVV 686
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ T+D WR+HL M+ L + +R+ G R+PL EY +G + F +M+
Sbjct: 768 MRVLERRVVLATVDRLWREHLYEMDYLKEGIGLRAMGQRDPLVEYGEEGAQMFSAMMENI 827
Query: 867 RRLTVESLVQYWS 879
R +S+ Q +S
Sbjct: 828 RE---DSVTQAFS 837
>gi|308803082|ref|XP_003078854.1| SECA_SPIOL Preprotein translocase secA subunit, chloroplast
precursor (ISS) [Ostreococcus tauri]
gi|116057307|emb|CAL51734.1| SECA_SPIOL Preprotein translocase secA subunit, chloroplast
precursor (ISS) [Ostreococcus tauri]
Length = 737
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 268/423 (63%), Gaps = 59/423 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ+IGG +LH+G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 LRPFDVQLIGGMILHEGQIAEMRTGEGKTLVSALPAYLNALSGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++H+FLGLS GLIQ GM EERR Y D+TY NSELGFDYLRDNLA N+ +LV
Sbjct: 141 EWIGQIHKFLGLSCGLIQAGMAEEERRVGYGSDVTYVTNSELGFDYLRDNLAQNTNELVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+F ++DEVDS+LIDE R PL+ISG A K RY AAK+A+ + HY V+ K
Sbjct: 201 R---DFNFCVIDEVDSILIDEARTPLIISGVADKPSERYIQAAKIADAFERDFHYKVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALK-------AKEFYRRDVQYIVR 210
S WA +++NA++ KE ++DV YIVR
Sbjct: 258 QKS--------------------------WALYLINAIRPXXXXXXXKELQKKDVNYIVR 291
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+ +I++E +GR RRWS+G+HQAVEAKEG+ IQ ++V +A +TYQ+ FK YPKL G
Sbjct: 292 GQEIVIVDEFSGRTMVGRRWSDGLHQAVEAKEGVTIQNETVTIASVTYQAFFKSYPKLGG 351
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA+TE EF ++++ V VPTN P R D F + GKW R+E+ M + G
Sbjct: 352 MTGTAETEITEFSNIYELEVAVVPTNRPVSREDSTDVVFRSESGKWNAVRKEISRMHKKG 411
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
RPVLVG+TSVE SE ++ LL + IP+ +LNA+P+ RE+E VAQ+GRK A+TI+TNMA
Sbjct: 412 RPVLVGTTSVERSEQIAALLDEDDIPYELLNAKPENVERESEIVAQSGRKGAVTIATNMA 471
Query: 391 GRG 393
GR
Sbjct: 472 GRA 474
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 599 EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANES 658
EDMPIE + L Q E+Y++ IRK L ++D VL QR+ VY R+ LT + E
Sbjct: 482 EDMPIESGMLTNSLDEAQKKVERYFYDIRKQLFDYDAVLNSQREKVYFERRRALTASREE 541
Query: 659 CSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKI 704
QQ+ +Y + +D+I+ N+D + W +D L L+++ G+I
Sbjct: 542 LQQQMLEYAELTIDDIVEANIDDSEPVAEWPIDGLVGKLRQYCYYFGEI 590
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M E ER ++ D W+ HL + + AV +R + ++PL EYK++G + M++
Sbjct: 634 MGEAERFFILSQTDNLWKQHLQAIKFVQQAVGLRGYAQKDPLIEYKLEGFNLYTEMMAQI 693
Query: 867 RRLTVESLVQY 877
RR + S+ +
Sbjct: 694 RRNVIYSVYMF 704
>gi|379756074|ref|YP_005344746.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
MOTT-02]
gi|443307210|ref|ZP_21036997.1| preprotein translocase subunit SecA [Mycobacterium sp. H4Y]
gi|378806290|gb|AFC50425.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
MOTT-02]
gi|442764578|gb|ELR82576.1| preprotein translocase subunit SecA [Mycobacterium sp. H4Y]
Length = 942
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 287/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V F G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRADQSDLIYKTEEAKYIAVVDDVVERFEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ +PHNVLNA K+ +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRVPHNVLNA--KFHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEA--MLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFG 677
E+ +Q ++ VV + G
Sbjct: 663 --ENLKEQALDMVRDVVTAYVNG 683
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLEGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+E+ E
Sbjct: 820 KEESVGFLFNVTVEAVPTPQVAPVEAPE 847
>gi|365842608|ref|ZP_09383606.1| preprotein translocase, SecA subunit [Flavonifractor plautii ATCC
29863]
gi|364575286|gb|EHM52689.1| preprotein translocase, SecA subunit [Flavonifractor plautii ATCC
29863]
Length = 916
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/447 (46%), Positives = 291/447 (65%), Gaps = 45/447 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+ + VQ+IGG +LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MKPYRVQLIGGIILHQGRIAEMKTGEGKTLVATLPAYLNALAGEGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGL+ + P++R+++Y DITY N+E GFDYLRDN+A + ++V
Sbjct: 139 EWMGKVYRFLGLTVGLVIHDIQPKDRKASYAADITYGTNNEFGFDYLRDNMAIYATEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGL------ 150
R FAIVDEVDS+LIDE R PL+ISG+ K Y V A VA+L Q +
Sbjct: 199 RG---HAFAIVDEVDSILIDEARTPLIISGQGDKSTQLYTVVDAFVAKLKGQRVASVDTK 255
Query: 151 ---------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
Y V+ K +V LT GIA AE + +L D EN + + A++A+
Sbjct: 256 EEEDPDLDADYVVDEKARTVTLTARGIAKAEQQFQVANLADPENTTLSHHINQAIRARGL 315
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
RRD+ Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG+ + +S +A IT+Q+
Sbjct: 316 MRRDIDYVVKDGEVIIVDEFTGRLMYGRRYSEGLHQAIEAKEGVTVARESKTLATITFQN 375
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F+LY KLSGMTGTA TEE+EF ++ + ++E+PTN P RVD P + T GK+
Sbjct: 376 YFRLYGKLSGMTGTAMTEEEEFGTIYSLDIVEIPTNKPVQRVDHPDVVYKTEAGKFRAIV 435
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++E + G+PVLVG+ S+E SE LS +LK++GI HNVLNA K+ +EAE VAQAG+
Sbjct: 436 NQIEECHKKGQPVLVGTISIEKSEELSAMLKKRGIKHNVLNA--KFHEKEAEIVAQAGKL 493
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAK 407
A+T++TNMAGRGTDI+LGGN + LAK
Sbjct: 494 GAVTVATNMAGRGTDIMLGGNAEYLAK 520
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 166/345 (48%), Gaps = 65/345 (18%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ GGL ++GT HESRRIDNQLRGRAGRQGDPG +RF +SL+D++ + F +
Sbjct: 568 EADQVRAAGGLFILGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLEDDIMRLFG--SE 625
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ ++ ++ DED PI+ + + Q E F RK+++E+D+V+ QRK +Y+
Sbjct: 626 RVMGMMEKLGVDEDTPIDAKILSNAIENAQKQVESRNFQTRKTVLEYDDVMNTQRKVIYE 685
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ +L G N + + +Q ++ +I V
Sbjct: 686 QRRKVLDGEN------LKESVQTMLSTVISTEVQA------------------------- 714
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
+ EL +D N+ + FRG+ + K +D
Sbjct: 715 ----------------HMGELKHMDAENWR-----EVCAQFRGLFLRPDEFK-----FTD 748
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + +A T+LL++ DI +E+ + M+E+ER ++++ +D +W D+
Sbjct: 749 EELQQYDAQALTDLLQERASDIY------ARKEAELGEPLMRELERVMMLRVVDEYWMDN 802
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ M L + +R++G +P+ YK +G F SM++A + T+
Sbjct: 803 IDAMQELRQGIGLRAYGQNDPVVAYKKEGYEMFESMIAAIQAETI 847
>gi|254822988|ref|ZP_05227989.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
ATCC 13950]
gi|379748772|ref|YP_005339593.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
ATCC 13950]
gi|406032317|ref|YP_006731209.1| protein translocase subunit secA 1 [Mycobacterium indicus pranii
MTCC 9506]
gi|378801136|gb|AFC45272.1| preprotein translocase subunit SecA [Mycobacterium intracellulare
ATCC 13950]
gi|405130864|gb|AFS16119.1| Protein translocase subunit secA 1 [Mycobacterium indicus pranii
MTCC 9506]
Length = 942
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 287/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V F G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRADQSDLIYKTEEAKYIAVVDDVVERFEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ +PHNVLNA K+ +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRVPHNVLNA--KFHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEA--MLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFG 677
E+ +Q ++ VV + G
Sbjct: 663 --ENLKEQALDMVRDVVTAYVNG 683
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLEGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+++ E
Sbjct: 820 KEESVGFLFNVTVEAVPTPQVAPVQAPE 847
>gi|338536536|ref|YP_004669870.1| preprotein translocasesubunit SecA [Myxococcus fulvus HW-1]
gi|337262632|gb|AEI68792.1| preprotein translocase, SecA subunit [Myxococcus fulvus HW-1]
Length = 940
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 283/430 (65%), Gaps = 29/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQLIGGMFLHEGCIAEMRTGEGKTLTATLPTYLNALSGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+RFLG++ G + + ++R+ +YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 WMGRVYRFLGMTTGCVLHELNDKQRQESYRADITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+I+G +Y +V LV YT++ K+
Sbjct: 202 ---ELNFAIVDEVDSILIDEARTPLIIAGPTEDSTDKYYRVDQVIPGLVPDQDYTLDEKH 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L +L+D + V AL+A Y+RD Y+V++G+ +I+
Sbjct: 259 RSVSLTDDGIEKLQKRLGVGNLYDPGEIETLHHVDQALRAHTLYKRDKDYVVKDGEVVIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQA+EAKEG+KI+ ++ +A +++Q+ F++Y KL+GMTGTA T
Sbjct: 319 DEFTGRQMPGRRWSDGLHQAIEAKEGVKIENENQTLATVSFQNYFRMYSKLAGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN P IR DL + T R K+E E+E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLDVRVIPTNRPPIRKDLQDVVYKTEREKFEAVAAEIEELHKNGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE ++ LK++GIPHNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVASFLKKRGIPHNVLNA--KQHQREADIVAQAGRKGAVTISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAK 407
LGGN ++LAK
Sbjct: 497 LGGNAEVLAK 506
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
E E EV GGL +IGT HESRR+DNQLRGRAGRQGDPG +RF +SL+D++ +
Sbjct: 549 EEQTKKEREEVHNAGGLFIIGTERHESRRVDNQLRGRAGRQGDPGGSRFFLSLEDDLMRI 608
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F + L+ R+ +E IE + R + G Q E + F IRK+L+E+D+V+ Q
Sbjct: 609 FGSERIQG--LMERLGMEEGEVIEHVWLSRAIEGAQKRVEGHNFDIRKNLLEYDDVMNQQ 666
Query: 641 RKHVYDLRQSILT 653
R+ +Y LR+ +L
Sbjct: 667 RRTIYKLRRQVLA 679
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+E + + +M+ ++ L T+D W+DHL+ M+ L + +R +G ++P +EYK +G
Sbjct: 780 AREEEFGENFMRFLQYNYLA-TIDRLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGY 838
Query: 857 RFFISMLSATRRLTVESLVQ 876
+ FI MLSA + V L+
Sbjct: 839 QGFIQMLSAIKAQFVTQLMH 858
>gi|291299368|ref|YP_003510646.1| preprotein translocase subunit SecA [Stackebrandtia nassauensis DSM
44728]
gi|290568588|gb|ADD41553.1| preprotein translocase, SecA subunit [Stackebrandtia nassauensis
DSM 44728]
Length = 955
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/431 (48%), Positives = 285/431 (66%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGA LH G+IAEMKT +VT NDYLAQRDA
Sbjct: 79 MRHFDVQIMGGAALHRGNIAEMKTGEGKTLVATLPAYLNALTGQGVHIVTTNDYLAQRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +HRFLGLSVG++ G + R Y CDITY N+E GFDYLRDN+A + V
Sbjct: 139 EWMGEIHRFLGLSVGVVLSGQNSAKHREAYECDITYGTNNEFGFDYLRDNMARTRDGRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R FAIVDEVDS+LIDE R PL+ISG A++ Y AK+A + + HY V+
Sbjct: 199 RG---HFFAIVDEVDSILIDEARTPLIISGPAAQSQRWYGQFAKLAARMRRDDHYEVDEA 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN-GKAL 215
N++ +TE+G+AL E L +L++ EN P ++ N++K+KE +++D YIV + G+ L
Sbjct: 256 KNTISVTEKGVALVEDQLGVENLYEPENTPLVGYLNNSIKSKELFKKDKDYIVSDDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I+++ TGRV RR++EG+HQA+EAKEG+ I+ ++ +A T Q+ F+ Y KL+GMTGTA
Sbjct: 316 IVDQFTGRVLHGRRYNEGMHQAIEAKEGVAIKQENQTLATTTLQNYFRQYDKLAGMTGTA 375
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE EF K++ + V+ +PT+ +R D + T K++ ++ G+PVLV
Sbjct: 376 HTEAGEFHKVYGVDVVAIPTHREMVRSDENDVIYKTEEAKFQAVVDDIVERHETGQPVLV 435
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ SV+NSE L+ LK++G+ H+VLNA K+ A+EAE +AQAGRK A+T+STNMAGRGTD
Sbjct: 436 GTVSVDNSELLARELKKRGVEHSVLNA--KFHAKEAEIIAQAGRKGAVTVSTNMAGRGTD 493
Query: 396 IILGGNPKMLA 406
I+LGGNP+ LA
Sbjct: 494 ILLGGNPEYLA 504
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 114/204 (55%), Gaps = 16/204 (7%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ E C EG EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL+D
Sbjct: 528 ALEKWEAACEEEGDEVRDAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLRD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ +KF+ A L++ + E+MPIE + R + Q E RK+++E+DE
Sbjct: 588 DLMRKFNAAAVEA--LMNSLKMPENMPIEHKMVTRMIRSAQAQIEGQNAEARKNVLEYDE 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QR+ +Y R+ +L G + SQQI M D++I V+ Y W LD+
Sbjct: 646 VLNNQREVIYGERRKVLDG--QDVSQQIKHMM----DDVIVAYVNGATEDGYTEDWDLDE 699
Query: 693 LLKEF-----IAIAGKILDDLFAG 711
L F I I L+D G
Sbjct: 700 LWSGFKQLYPIGITVAELEDSVGG 723
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER VL++ +D WR+HL M+ L + +R++ R+P+ EYK +G F ML
Sbjct: 757 MRNLERDVLLQVIDTKWREHLYEMDYLKEGIRLRAYAQRDPVVEYKREGFDMFNVMLDGI 816
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 817 KEDTVRYL 824
>gi|172044645|sp|Q2INY3.2|SECA_ANADE RecName: Full=Protein translocase subunit SecA
Length = 945
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/431 (48%), Positives = 280/431 (64%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 82 MRHFDVQLIGGAVLHSGKIAEMKTGEGKTLVATLPCVLNALSGRGVHVVTVNDYLARRDA 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RF GLS G+I G+ ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 142 EWMGRLYRFCGLSTGVIVHGLTDRERQQAYGSDITYGQNNEFGFDYLRDNMKFRLQDYVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG + + Y V +++ +TV+ K
Sbjct: 202 ---GELNFAIVDEVDSILIDEARTPLIISGPSDESSELYARVNAVIPSMIRDQDFTVDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ ++ +T+ G+ E L +L+ E V AL+A YR +V Y+V+ G+ LI
Sbjct: 259 SRTIVMTDAGVEKMEKKLSVQNLYAPEEIETLHHVEQALRAHHIYRNEVDYVVKEGEVLI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A I++Q+ F++Y KL+GMTGTA
Sbjct: 319 VDEFTGRLMPGRRWSDGLHQAVEAKEGVKIEAENQTLATISFQNYFRMYSKLAGMTGTAD 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K + + V+ +PTN N+R D + T K++ E+E G+PVLVG
Sbjct: 379 TEAEEFAKTYNIDVVVIPTNQKNVRKDAEDVVYKTEGEKFDALCTEIEQRHGTGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SV SE +S LLK++G+PH+VLNA K+ REAE VAQAGRK A+TISTNMAGRGTDI
Sbjct: 439 TVSVAKSEVVSALLKRRGVPHSVLNA--KHHQREAEIVAQAGRKGAVTISTNMAGRGTDI 496
Query: 397 ILGGNPKMLAK 407
ILGGN +M+AK
Sbjct: 497 ILGGNAEMMAK 507
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 42/350 (12%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + + E EV +LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+ F +SL+D
Sbjct: 540 ALEKLKAQTAAEHEEVVKLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSIFYLSLED 599
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ + F D L+ R+ + IE + + + G Q E + F IRK+L+E+D+
Sbjct: 600 ELMRIFGSDRIQG--LMGRMGMKDGEQIEHPWLTKAIEGAQKKVEAHNFDIRKNLLEYDD 657
Query: 636 VLEVQRKHVYDLRQSIL---TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
V+ QR+ +Y LR+ +L G ++ + + E +F D +H LD
Sbjct: 658 VMNQQRRSIYRLRRMVLGFGAGVPVVEYEEDPKTRKKTRHEQVFTWADAGEH----MLDL 713
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
+ + + G A + L +I E + + P + +P R +
Sbjct: 714 VEDLVVEMVGASCPSRVADWDLEGLSANIRE-----QFGVEMKFTPPVGRPQEARRALEE 768
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
+ ++ L YRA L K I + ++ E+
Sbjct: 769 QVFNVVEKL------------YRAKEEELGKDPEGIPV----------------LRRWEQ 800
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+ ++ +D W+DHL++M+ L + +R +G ++P +EYK +G F+ M
Sbjct: 801 YLYLQAIDQQWKDHLLSMDHLRQGIGLRGYGQKDPKQEYKKEGYEMFVQM 850
>gi|387877430|ref|YP_006307734.1| preprotein translocase subunit SecA [Mycobacterium sp. MOTT36Y]
gi|386790888|gb|AFJ37007.1| preprotein translocase subunit SecA [Mycobacterium sp. MOTT36Y]
Length = 942
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 287/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT VVTVNDYLA+RD+E
Sbjct: 78 RPFDVQVMGAAALHFGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFAIVDEVDSILIDEARTPLIISGPAHGASNWYLEFARLAPLMEKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRDGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 315 DEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V F G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNKPMIRADQSDLIYKTEEAKYIAVVDDVVERFEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS +++ +PHNVLNA K+ +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFQKRRVPHNVLNA--KFHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 493 LGGNVDFLTDQRLRERGL 510
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+ A +++R
Sbjct: 545 GGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEA--MLNR 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK +Y R+ IL G
Sbjct: 603 LNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFG 677
E+ +Q ++ VV + G
Sbjct: 663 --ENLKEQALDMVRDVVTAYVNG 683
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLEGM 819
Query: 867 RR--------LTVESLVQYWSSPMESQE 886
+ +TVE++ +P+E+ E
Sbjct: 820 KEESVGFLFNVTVEAVPTPQVAPVEAPE 847
>gi|68536717|ref|YP_251422.1| preprotein translocase subunit SecA [Corynebacterium jeikeium K411]
gi|123650422|sp|Q4JTQ3.1|SECA1_CORJK RecName: Full=Protein translocase subunit SecA 1
gi|68264316|emb|CAI37804.1| preprotein translocase SecA subunit [Corynebacterium jeikeium K411]
Length = 867
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 284/438 (64%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G ++EMKT VVTVNDYLA+RDAE
Sbjct: 81 KHYKVQIMGGAGLHFGYVSEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLS +I G P ERR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 141 WMGRVHRFLGLSTDVILSGKNPAERREAYNADITYGTNNEFGFDYLRDNMAHSLNDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG + A +A L + +HY V+ +
Sbjct: 201 ---GHNYAIVDEVDSILIDEARTPLIISGPVEGSSKWFSAFAAIAPKLTRDIHYEVDERK 257
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ E+ ++ N++KAKE + RD YIVRNG+ +I+
Sbjct: 258 KTVGVKEEGVEFVEDQLGIENLYAPEHSQLVSYLNNSIKAKELFTRDKDYIVRNGEVVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RR++EGIHQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRILDGRRYNEGIHQAIEAKEHVEIKNENQTLATVTLQNYFRLYDKLAGMTGTAET 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ V +PTN N R D + T K+E +++ +G+PVLVG+
Sbjct: 378 EAAELKSTYKLDVAAIPTNKENKRKDNVDLIYKTQEAKFEAVAEDIAERVEIGQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI HNVLNA KY +EAE VAQAGR A+T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRLLQRRGIKHNVLNA--KYHEKEAEIVAQAGRLGAVTVATNMAGRGTDIV 495
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 496 LGGNPDIIADINLRERGL 513
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 158/353 (44%), Gaps = 61/353 (17%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E +V+ +GGL+V+GT HESRRIDNQLRGR+ RQGDPG TRF +S++D++ +F
Sbjct: 537 SKEEAEKVREVGGLYVLGTERHESRRIDNQLRGRSARQGDPGETRFYLSMRDDLMVRFVG 596
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T A +++R+ +D I+ + + G Q E F +RK+++++DEV+ QRK
Sbjct: 597 QTMEA--MMTRLNIPDDEAIDSKMVTNAIKGAQSQVESANFEMRKNVLKYDEVMNEQRKV 654
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
+Y R+ IL G E +QI ++ ++ + G + W LD L ++ G
Sbjct: 655 IYGERRQILEG--EDVEKQIRSMLKDTIEAYVDGAT-AEGYVEDWDLDTLWNALDSLYGP 711
Query: 704 IL--DDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL 761
++L + GD + EL+S + + D R+ L+ +
Sbjct: 712 TFTHEEL---VEGDEYGRP----GELSSSQLLDALLED----------ANREYDELEEKV 754
Query: 762 AICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDC 821
+ + + G R A+ LNVV + + +Y
Sbjct: 755 SEVAGEEQMRGMER---------------AALLNVVDQKWREHLY--------------- 784
Query: 822 FWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
M+ L + +R+ R+PL EY+ +G F M + TV L
Sbjct: 785 -------EMDYLKEGIGLRAMAQRDPLVEYQREGGDMFNRMKDGIKEETVRQL 830
>gi|402303925|ref|ZP_10823007.1| SecA cross-linking domain protein [Selenomonas sp. FOBRC9]
gi|400376994|gb|EJP29880.1| SecA cross-linking domain protein [Selenomonas sp. FOBRC9]
Length = 880
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALSGRGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYASDVTFGTNNEFGFDYLRDNMVLSEGQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A L +G YTV+ K
Sbjct: 203 R---DLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYAVMANAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VRN + +I
Sbjct: 260 QKTVAPADSAVPKIEKLVGIQNLYAPENIELSHCFTAALRAKALMHRDRDYVVRNDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYEKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P R+D P + T K+ Q V+ + G+PVL+G
Sbjct: 380 TEENEFLKIYKLPVIVIPTNKPVQRIDHPDVIYKTKAAKYRAVGQSVKDIHASGQPVLIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++L++ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSNVLRKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL ++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEELGGLFIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + ++ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 SI--MDKLGMEEDEPIEHAIITRSVEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 618 RRKILCG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPQGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E+L E
Sbjct: 676 KKEELEALARDEIQELLEQLAE 697
>gi|336326268|ref|YP_004606234.1| protein translocase subunit [Corynebacterium resistens DSM 45100]
gi|336102250|gb|AEI10070.1| protein translocase subunit [Corynebacterium resistens DSM 45100]
Length = 860
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 285/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G +AEMKT VVTVNDYLA+RDAE
Sbjct: 72 KHYKVQIMGGAGLHFGYVAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 131
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL+ +I PE RR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 132 WMGRVHRFLGLTTDVILSEKRPEARRKAYNSDITYGTNNEFGFDYLRDNMAHSLDDLVQR 191
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAI+DEVDS+LIDE R PL+ISG + A++A + + +HY ++ +
Sbjct: 192 ---GHNFAIIDEVDSILIDEARTPLIISGPVDGSSQWFSAFARIAPKMTRDIHYEIDERK 248
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ E+ ++ N++KAKE + RD YIVRNG+ +I+
Sbjct: 249 KTVGIKEEGVEFVEDHLGIENLYAPEHSQLVSYLNNSIKAKELFTRDKDYIVRNGEVVIV 308
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RR++EGIHQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 309 DEFTGRILDGRRYNEGIHQAIEAKENVEIKNENQTLATVTLQNYFRLYDKLAGMTGTAET 368
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ V +PTN PN R D + T K+E ++ G+PVLVG+
Sbjct: 369 EAAELKSTYKLDVAPIPTNKPNQRKDNVDLIYKTQEAKFEAVADDIAERVEKGQPVLVGT 428
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI HNVLNA K+ +EAE VAQAGR+ A+T++TNMAGRGTDI+
Sbjct: 429 TSVERSEYLSQLLQRRGIKHNVLNA--KFHEQEAEIVAQAGRRGAVTVATNMAGRGTDIV 486
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 487 LGGNPDIIADINLRERGL 504
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 158/354 (44%), Gaps = 62/354 (17%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E EV++ GGL+V+GT HESRRIDNQLRGR+ RQGDPG TRF +S++D++ +F
Sbjct: 528 SKEEAEEVRKAGGLYVLGTERHESRRIDNQLRGRSARQGDPGETRFYLSMRDDLMVRFVG 587
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T A +++R+ + I+ + + G Q E F +RK+++++DEV+ QRK
Sbjct: 588 QTMEA--MMTRLNIPDHEAIDSKMVTNAIKGAQSQVEAANFEMRKNVLKYDEVMNEQRKV 645
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAI 700
+Y R+ IL G E +QI + ++D+ I VD Y W LDKL ++
Sbjct: 646 IYAERRQILEG--EDVERQI----RGMIDDTISAYVDFETSDGYVEDWDLDKLWNALESL 699
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
G + + + GD K EL+S + D + K++
Sbjct: 700 YGPSMTHE-SLVEGDEYGKK----GELSSAQLRKALLED----------------AEKQY 738
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLD 820
+ +D +G + R L LNVV + + +Y
Sbjct: 739 DQLEADVTELSGDEEQMRGIERGVL--------LNVVDQKWREHLY-------------- 776
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
M+ L + +R+ R+PL EY+ +G F M + TV L
Sbjct: 777 --------EMDYLKEGIGLRAMAQRDPLVEYQREGGDMFNRMKDGIKEETVRQL 822
>gi|294783064|ref|ZP_06748388.1| preprotein translocase, SecA subunit [Fusobacterium sp. 1_1_41FAA]
gi|294479942|gb|EFG27719.1| preprotein translocase, SecA subunit [Fusobacterium sp. 1_1_41FAA]
Length = 876
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/453 (46%), Positives = 291/453 (64%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGKGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ + V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKRSYESDITYGTNSEFGFDYLRDNMVSDMKNKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y V+ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQVSFQVVSMLTRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ +V LTE+G+ E L+ ++L+ E+ F+ A
Sbjct: 258 IKEKKAMNIPNEKWGDYEVDEKSRTVVLTEKGVKRVEKILKIDNLYSPEHVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+ I A++ +
Sbjct: 318 LKAKELFKRDRDYLVRENGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVNIAAENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + VI +PTNLP IR D + T
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVIVIPTNLPVIRRDNADLVYKTKN 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
GK + +E ++ G+PVLVG+ S+++SE LS+LLK++G+PHNVLNA K+ A+EAE
Sbjct: 438 GKIKSIIDRIEGLYEKGQPVLVGTISIKSSEELSELLKKRGVPHNVLNA--KFHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 9/180 (5%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D
Sbjct: 543 VLAKYQEQCKIEKEQVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLED 602
Query: 576 EMFQKFSFD--TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
++ + F + + W + R+ ED PI I + Q E FGIRKSL+EF
Sbjct: 603 DLMRLFGSERVSVW----MERLKLPEDEPITHGMINSAIEKAQKKIEARNFGIRKSLLEF 658
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
D+V+ +QRK +Y+ R L ++ +I ++ + ++ +H W +D L
Sbjct: 659 DDVMNLQRKAIYENRNEAL--GTDNLKDKILGMLKDTITAKVYEKF-AAEHKEDWDIDGL 715
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +E+ +L + +D WR+HL ++ L ++ +R++G R+P+ EYKI + F M+S
Sbjct: 765 LRNLEKYILFEVVDNKWREHLKALDGLRESIYLRAYGQRDPVTEYKIISSQIFEEMISNI 824
Query: 867 RRLTVESLVQ 876
+ T L +
Sbjct: 825 KEQTTSFLFK 834
>gi|269792260|ref|YP_003317164.1| Preprotein translocase subunit SecA [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099895|gb|ACZ18882.1| preprotein translocase, SecA subunit [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 881
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/435 (49%), Positives = 285/435 (65%), Gaps = 34/435 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 LRHFDVQLMGGMALHEGKIAEMKTGEGKTLVATLAVALNALEGKGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+R LGL+V +I+ M E+R + YR DITY NSE GFDYLRDN+A + + V
Sbjct: 141 EWMGPVYRGLGLTVAVIEPFMSQEDRYAAYRADITYGTNSEFGFDYLRDNMALSKREQVQ 200
Query: 98 R--WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVE 155
R W + +VDEVDS+LIDE R PL+ISG + V Y VA A L +G + V+
Sbjct: 201 RGHW-----YCLVDEVDSILIDEARTPLIISGPSEDSVEPYRVADSCARSLRKGEDFEVD 255
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDEN--DPWARFVMNALKAKEFYRRDVQYIVRNGK 213
K +V LTE GIA E L+ +L+ + A V+ ALKA ++RDV Y+V++G+
Sbjct: 256 EKERNVALTERGIARCEEILKVPNLFSDYGMSELAHKVIQALKAHHLFQRDVHYVVKDGE 315
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
+I++E TGR+ RR+S+G+HQA+EAKE ++I +S +A IT Q+ F++Y KLSGMTG
Sbjct: 316 IVIVDEFTGRLMFGRRYSDGLHQAIEAKERVRIGRESQTLATITLQNYFRMYKKLSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA TE +EF +++ M V+ +PT+ P IRVD P F T R K+ VE R G+PV
Sbjct: 376 TAATEAEEFKEIYGMDVVVIPTHRPMIRVDHPDVIFRTQREKYNAVADLVEERHRSGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+ S+ENSE +S LLK + IPH+VLNA K+ +EA VAQAGR A+T++TNMAGRG
Sbjct: 436 LVGTASIENSERVSKLLKARKIPHHVLNA--KFHDKEAAIVAQAGRFGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLAKK 408
TDI+LGGNP LAK+
Sbjct: 494 TDILLGGNPSFLAKE 508
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L+ C E +V GGL ++GT HESRRIDNQLRGRAGRQGDPG +RF +S
Sbjct: 524 YREILERYRKLCEEERKKVVAAGGLCILGTERHESRRIDNQLRGRAGRQGDPGESRFFIS 583
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D ++++ +E +E + + + Q E+ +F IRK L+
Sbjct: 584 LEDDLLRLFGSDRIQG--FMAKMGMEEGESVEHSLLTKAIENAQRKVEQMHFDIRKQLLA 641
Query: 633 FDEVLEVQRKHVYDLRQSILTGAN 656
+D V+ QR+ VY RQ IL N
Sbjct: 642 YDNVMNQQREAVYKERQEILWADN 665
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
E+ R +L+ LD W++HL+ M+ L + +R+ G ++PL EY+ + F ML R
Sbjct: 750 ELFRFLLLNVLDSHWKEHLLAMDELRRGIGLRAIGQKDPLLEYQFESFNLFKEMLDKVR 808
>gi|337290192|ref|YP_004629213.1| preprotein translocase subunit [Corynebacterium ulcerans BR-AD22]
gi|334698498|gb|AEG83294.1| preprotein translocase subunit [Corynebacterium ulcerans BR-AD22]
Length = 849
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 82 KHYLVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 142 WMGRVHRWLGLEVGVILANMQPTERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 202 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 258
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 259 RTVGIKEEGVAYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 319 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYEKLAGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 379 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 439 TSVERSEYLSKLLQRRGVRHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 496
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 497 LGGNPDIIADINLRERGL 514
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 544 EVRDAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 601
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 602 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 661
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I +Q ++D+ I VD Y W LD L ++ G
Sbjct: 662 EILESAD------IADNIQRMIDDTIGAYVDGATAQGYVEDWDLDALWNALESLYG 711
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 764 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 823
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 824 KEETVRQL 831
>gi|431795282|ref|YP_007222187.1| protein translocase subunit secA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785508|gb|AGA70791.1| protein translocase subunit secA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 832
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/422 (48%), Positives = 281/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T +VTVNDYLA+RD+E
Sbjct: 79 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGRGVHIVTVNDYLARRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +H+FLGLSVGLI G+ +RR +Y DITY N+E GFDYLRDN+ + LV R
Sbjct: 139 MMGLIHQFLGLSVGLIVHGLNYSQRRESYAADITYGTNNEFGFDYLRDNMVTRPDGLVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A + L Y V K+
Sbjct: 199 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYFRVAMIIPRLKPEEDYNVNEKD 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L +L+D+ + A V ALKA ++RD Y+V++G+ +I+
Sbjct: 256 RVVTLTEQGVSRVETMLAVENLFDDLHTELAHHVNQALKAHALFKRDRDYVVKDGQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +KI+ +S +A IT+Q+ F+++ KL+GMTGTA T
Sbjct: 316 DEFTGRLMFGRRYSEGLHQAIEAKEKVKIEKESQTLATITFQNYFRMFEKLAGMTGTAMT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+ +PTN P IR D+P + T GK++ +E+ ++ G+PVLVG+
Sbjct: 376 EEPEFRKIYKLDVVVIPTNKPMIREDIPDVVYRTEDGKFKAVVEEIIERYKKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE LSD+L+++G+PH VLNA K+ +EAE +A AG K +TI+TNMAGRGTDII
Sbjct: 436 VSVEKSERLSDMLERRGVPHQVLNA--KFHEKEAEIIAGAGLKDMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 178/363 (49%), Gaps = 75/363 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV LGGLH++GT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F +
Sbjct: 495 GEEVANLGGLHIMGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRLFGAENIM 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ D+ +PI I R + Q E F IRK ++++D+V+ +QR+ +Y
Sbjct: 555 G--MMDKLGMDDSIPITSKMISRSVETAQRRVENRNFEIRKHVLDYDDVMNLQREVIYAQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L G N +++ D L+K+++E + D
Sbjct: 613 RRQVLMGGN---------IQESIAD----------------MLEKVVRETV--------D 639
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNF--YFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
+F S P D+N+F Y +L P +
Sbjct: 640 MFGAQS-----------PYPEEWDLNSFLEYVENLILP---------------------N 667
Query: 766 DDLTKNGRYRATTNLLRKYLGDILI--ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
D+T + N+ ++ + ++L+ A +E + + M+E+ERAV+++ +D W
Sbjct: 668 HDIT----FDQVANMEKEEIVEMLLERARAHYKTREEAFGEEIMREIERAVMLQVVDKKW 723
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPME 883
DHL M+ L + +R++G +NPL EY+ + F M+S+ + T+ +++ E
Sbjct: 724 MDHLDAMDMLREGIGLRAYGQKNPLVEYRHEAYDMFQGMISSIQEDTIRYIMRVTPQVTE 783
Query: 884 SQE 886
++
Sbjct: 784 QKQ 786
>gi|215794642|pdb|3DL8|A Chain A, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
gi|215794643|pdb|3DL8|B Chain B, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
Length = 779
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|397653434|ref|YP_006494117.1| preprotein translocase subunit SecA [Corynebacterium ulcerans 0102]
gi|393402390|dbj|BAM26882.1| preprotein translocase subunit SecA [Corynebacterium ulcerans 0102]
Length = 847
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLEVGVILANMQPTERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 257 RTVGIKEEGVAYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYEKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSKLLQRRGVRHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 542 EVRDAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I +Q ++D+ I VD Y W LD L ++ G
Sbjct: 660 EILESAD------IADNIQRMIDDTIGAYVDGATAQGYVEDWDLDALWNALESLYG 709
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|260577908|ref|ZP_05845838.1| preprotein translocase, SecA subunit [Corynebacterium jeikeium ATCC
43734]
gi|258603928|gb|EEW17175.1| preprotein translocase, SecA subunit [Corynebacterium jeikeium ATCC
43734]
Length = 858
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 284/438 (64%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G ++EMKT VVTVNDYLA+RDAE
Sbjct: 72 KHYKVQIMGGAGLHFGYVSEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDAE 131
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLS +I G P ERR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 132 WMGRVHRFLGLSTDVILSGKNPAERREAYNADITYGTNNEFGFDYLRDNMAHSLNDLVQR 191
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG + A +A L + +HY V+ +
Sbjct: 192 ---GHNYAIVDEVDSILIDEARTPLIISGPVEGSSKWFSAFAAIAPKLTRDIHYEVDERK 248
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ E+ ++ N++KAKE + RD YIVRNG+ +I+
Sbjct: 249 KTVGVKEEGVEFVEDQLGIENLYAPEHSQLVSYLNNSIKAKELFTRDKDYIVRNGEVVIV 308
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RR++EGIHQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 309 DEFTGRILDGRRYNEGIHQAIEAKEHVEIKNENQTLATVTLQNYFRLYDKLAGMTGTAET 368
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ V +PTN N R D + T K+E +++ +G+PVLVG+
Sbjct: 369 EAAELKSTYKLDVAAIPTNKENKRKDNVDLIYKTQEAKFEAVAEDIAERVEIGQPVLVGT 428
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++GI HNVLNA KY +EAE VAQAGR A+T++TNMAGRGTDI+
Sbjct: 429 TSVERSEYLSRLLQRRGIKHNVLNA--KYHEKEAEIVAQAGRLGAVTVATNMAGRGTDIV 486
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 487 LGGNPDIIADINLRERGL 504
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 167/351 (47%), Gaps = 57/351 (16%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E +V+ +GGL+V+GT HESRRIDNQLRGR+ RQGDPG TRF +S++D++ +F
Sbjct: 528 SKEEAEKVREVGGLYVLGTERHESRRIDNQLRGRSARQGDPGETRFYLSMRDDLMVRFVG 587
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T A +++R+ +D I+ + + G Q E F +RK+++++DEV+ QRK
Sbjct: 588 QTMEA--MMTRLNIPDDEAIDSKMVTNAIKGAQSQVESANFEMRKNVLKYDEVMNEQRKV 645
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
+Y R+ IL G E +QI ++ ++ + G + W LD L
Sbjct: 646 IYGERRQILEG--EDVEKQIRNMLKDTIEAYVDGAT-AEGYVEDWDLDTLW--------N 694
Query: 704 ILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
LD L+ G T + EEL E + D +P L SSS + L
Sbjct: 695 ALDSLY----GPTF--THEELVEGD----------DYGRPGEL-------SSS--QLLEA 729
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
DD R+Y D L V E + M+ +ERA L+ +D W
Sbjct: 730 LLDDAN------------REY--DELEEKVSEVAGEEQ-----MRGMERAALLNVVDQKW 770
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F M + TV L
Sbjct: 771 REHLYEMDYLKEGIGLRAMAQRDPLVEYQREGGDMFNRMKDGIKEETVRQL 821
>gi|384515112|ref|YP_005710204.1| preprotein translocase subunit [Corynebacterium ulcerans 809]
gi|334696313|gb|AEG81110.1| preprotein translocase subunit [Corynebacterium ulcerans 809]
Length = 849
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 82 KHYLVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 142 WMGRVHRWLGLEVGVILANMQPTERREAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 202 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 258
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 259 RTVGIKEEGVAYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 319 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYEKLAGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 379 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 439 TSVERSEYLSKLLQRRGVRHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 496
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 497 LGGNPDIIADINLRERGL 514
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 544 EVRDAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 601
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 602 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 661
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I +Q ++D+ I VD Y W LD L ++ G
Sbjct: 662 EILESAD------IADNIQRMIDDTIGAYVDGATAQGYVEDWDLDALWNALESLYG 711
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 764 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 823
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 824 KEETVRQL 831
>gi|404445355|ref|ZP_11010496.1| preprotein translocase subunit SecA [Mycobacterium vaccae ATCC
25954]
gi|403652295|gb|EJZ07352.1| preprotein translocase subunit SecA [Mycobacterium vaccae ATCC
25954]
Length = 934
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 286/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HFDVQ++GGA LH G++AEMKT +VTVNDYLA+RDAE
Sbjct: 79 KHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPAYLNALSGKGMHIVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL VG+I M P++RR+ Y DITY N+E GFDYLRDN+A E V R
Sbjct: 139 QMGRVHRFLGLDVGVILSQMTPDQRRTAYNADITYGTNNEFGFDYLRDNMALRLEDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V++K
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADGGSNWYTEFARLAPLMEKDVHYEVDIKK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V + E G+ E L +L++ N P ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 256 RVVGINEIGVEFVEDQLGIENLYEAANSPLISYLNNAIKAKELFERDKHYIVRNGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV RR++EG+HQA+EAKE ++I+A++ VA IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DDFTGRVLIGRRYNEGLHQAIEAKEHVEIKAENQTVATITLQNYFRLYDKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 376 EAAELHEIYKLGVVPIPTNRPMIRADQSDLIYKTEEAKFIAVVDDVAERYEKGQPVLIGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS +++ IPHNVLNA K+ +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 436 TSVERSEFLSRQFEKRRIPHNVLNA--KFHEQEAGIIAEAGRLGAITVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + R L
Sbjct: 494 LGGNVDYLLDRKLRQRGL 511
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 QVAAEAKDVIAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLADELMRRFN 593
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
T L++R+ +D+PIE + R + Q E+ F IRK ++++DEV+ QRK
Sbjct: 594 GATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFDIRKEVLKYDEVMNQQRK 651
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R+ IL G E+ ++Q + + V+ + G + W L+KL
Sbjct: 652 VIYAERRRILEG--ENLAEQAHKMLVDVITAYVDGATSE-GYSEDWDLEKL 699
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ LD WR+HL M+ L + +R + P EY +G F++ML
Sbjct: 761 MRQLERNVLLNVLDRKWREHLYEMDYLREGIGLRGLAQQRPEVEYAREGYDMFVAMLEGM 820
Query: 867 RRLTV 871
+ +V
Sbjct: 821 KEESV 825
>gi|118618053|ref|YP_906385.1| preprotein translocase subunit SecA [Mycobacterium ulcerans Agy99]
gi|167016615|sp|A0PRE5.1|SECA1_MYCUA RecName: Full=Protein translocase subunit SecA 1
gi|118570163|gb|ABL04914.1| preprotein translocase SecA1 1 subunit [Mycobacterium ulcerans
Agy99]
Length = 950
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 283/438 (64%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F+VQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 78 RPFEVQLMGAAALHLGNVAEMKTGEGKTLTSVLPAYLNGIGGKGVHIVTVNDYLAKRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M PEERR Y DITY N+E GFDYLRDN+A + V R
Sbjct: 138 WMGRVHRFLGLDVGVILAQMTPEERRVAYNADITYGTNNEFGFDYLRDNMAHTLDDCVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F IVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY V+L+
Sbjct: 198 G---HNFVIVDEVDSILIDEARTPLIISGPADGSSNWYTEFARLAPLMEKDTHYEVDLRK 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 255 RTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFNRDKDYIVRNGEVLIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR+SEG+HQA+EAKE ++I+A++ +A IT Q+ F+LY K +GMTGTA+T
Sbjct: 315 DEFTGRVLIGRRYSEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYNKHAGMTGTAQT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 375 EAAELHEIYKLGVVPIPTNRPMVREDQSDLIYKTEEAKYIAVVDDVAERYEKGQPVLIGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A+AGR+ AIT++TNMAGRGTDI+
Sbjct: 435 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEAGIIAEAGRRGAITVATNMAGRGTDIV 492
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L K + D L
Sbjct: 493 LGGNVDFLTDKRLRDNGL 510
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 24/208 (11%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + +E +EV + GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 527 LPKVKEEAGDEATEVIKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 586
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++ F+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV
Sbjct: 587 LMRR--FNGAALESLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEV 644
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+ QRK +Y R+ IL G N + Q ++ ++ ++I VD Y W LD L
Sbjct: 645 MNQQRKVIYAERRRILEGEN------LQQQVKDMLTDVITAYVDGATVEGYAEDWDLDAL 698
Query: 694 ---LKEFIAIAGKILDDLFAGISGDTLL 718
LK + GI DTL+
Sbjct: 699 WTALKTLYPV----------GIKTDTLM 716
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F++ML
Sbjct: 760 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGV 819
Query: 867 RRLTV 871
+ +V
Sbjct: 820 KEESV 824
>gi|407961062|dbj|BAM54302.1| preprotein translocase subunit SecA [Synechocystis sp. PCC 6803]
Length = 605
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/676 (36%), Positives = 357/676 (52%), Gaps = 115/676 (17%)
Query: 228 RRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQ 287
RRWS+G+HQA+EAKE ++IQ +S +A ITYQ+ F LYPKLSGMTGTAKTEE E K++
Sbjct: 4 RRWSDGLHQAIEAKERVEIQKESQTLATITYQNFFLLYPKLSGMTGTAKTEETELEKVYN 63
Query: 288 MPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLS 347
+ V PTN P+ R D P + KW+ E E + + GRP+LVG+TSVE SE +S
Sbjct: 64 LQVTITPTNRPSSRQDWPDVVYKNEEAKWKAVALECEELHQQGRPILVGTTSVEKSEVIS 123
Query: 348 DLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
LL+ GI HN+LNARP+ RE+E VAQAGRK A+TI+TNMAGRGTDIILGGN +A+
Sbjct: 124 RLLQSSGIHHNLLNARPENVERESEIVAQAGRKGAVTIATNMAGRGTDIILGGNSDYMAR 183
Query: 408 KIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLA---KAALLAKYVGKAE 464
+ + L+ + R DD +LG+ ++ K GK +
Sbjct: 184 LKVREYLMPKIVRPE-----DD-----------ELGAGVTGWVSGREKPQGFGNQNGKKK 227
Query: 465 GKSWTY----------QEAKSFFSESVEMS-QSMNLKELQKL--IDKQSAMYPLGPT--- 508
K+W QE + ++V+ + L+ L +L DK + GPT
Sbjct: 228 VKTWQVSPDIYPTTISQETEDLLKKAVKFAVDQYGLQSLTELEAEDKLAIASEKGPTDDP 287
Query: 509 ----VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
+ Y + ++ EV S E EV LGGLHVIGT HESRR+DNQLRGRAGRQGDP
Sbjct: 288 VILKLREVYNQIRREYEVLTSAEHKEVVELGGLHVIGTERHESRRVDNQLRGRAGRQGDP 347
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
GSTRF +SL+D + + F D L++ +EDMPIE + L G Q E YY+
Sbjct: 348 GSTRFFLSLEDNLLRIFGGDR--VAGLMNMFRVEEDMPIESKMLTGSLEGAQKKVETYYY 405
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
IRK + E+DEV+ QRK +Y R+ +L G + +Q+ Y + +DEI+ V+P
Sbjct: 406 DIRKQVFEYDEVMNNQRKAIYAERRRVLEGLD--LKEQVLVYAEKTMDEIVDAYVNPELP 463
Query: 685 PRYWSLDKLL---KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLP 741
P W ++ +L K+F+ +L+DL ++E+L ++ ++ F+ ++
Sbjct: 464 PEEWDVENMLDKAKQFVY----LLEDL-----------TVEDLGDMTVWEMKTFFHEEV- 507
Query: 742 KPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESR 801
RK+ LK E++
Sbjct: 508 ----------RKAYDLK----------------------------------------ETQ 517
Query: 802 YDDV---YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRF 858
D V M+E ER +++ +D WR+HL +M L ++ +R +G ++PL EYK +G
Sbjct: 518 VDKVRPGLMREAERYFILQQIDNLWREHLQSMEALRESIGLRGYGQKDPLIEYKQEGYEM 577
Query: 859 FISMLSATRRLTVESL 874
F+ M+ RR V SL
Sbjct: 578 FLEMMIDIRRNVVYSL 593
>gi|119390079|pdb|2IBM|A Chain A, A Novel Dimer Interface And Conformational Changes
Revealed By An X- Ray Structure Of B. Subtilis Seca
gi|119390080|pdb|2IBM|B Chain B, A Novel Dimer Interface And Conformational Changes
Revealed By An X- Ray Structure Of B. Subtilis Seca
Length = 780
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|373115849|ref|ZP_09530013.1| preprotein translocase, SecA subunit [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670007|gb|EHO35098.1| preprotein translocase, SecA subunit [Lachnospiraceae bacterium
7_1_58FAA]
Length = 916
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/447 (46%), Positives = 291/447 (65%), Gaps = 45/447 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+ + VQ+IGG +LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MKPYRVQLIGGIILHQGRIAEMKTGEGKTLVATLPAYLNALAGEGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+VGL+ + P++R+++Y DITY N+E GFDYLRDN+A + ++V
Sbjct: 139 EWMGKVYRFLGLTVGLVIHDIQPKDRKASYAADITYGTNNEFGFDYLRDNMAIYATEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGL------ 150
R FAIVDEVDS+LIDE R PL+ISG+ K Y V A VA+L Q +
Sbjct: 199 RG---HAFAIVDEVDSILIDEARTPLIISGQGDKSTQLYTVVDAFVAKLKGQRVASVDTK 255
Query: 151 ---------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
Y V+ K +V LT GIA AE + +L D EN + + A++A+
Sbjct: 256 EEEDPDLDADYVVDEKARTVTLTARGIAKAEQQFQVANLADPENTTLSHHINQAIRARGL 315
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
RRD+ Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEG+ + +S +A IT+Q+
Sbjct: 316 MRRDIDYVVKDGEVIIVDEFTGRLMYGRRYSEGLHQAIEAKEGVTVARESKTLATITFQN 375
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F+LY KLSGMTGTA TEE+EF ++ + ++E+PTN P RVD P + T GK+
Sbjct: 376 YFRLYGKLSGMTGTAMTEEEEFGTIYSLDIVEIPTNKPVQRVDHPDVVYKTEAGKFRAIV 435
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
++E + G+PVLVG+ S+E SE LS +LK++GI HNVLNA K+ +EAE VAQAG+
Sbjct: 436 NQIEECHKKGQPVLVGTISIEKSEELSAMLKKRGIRHNVLNA--KFHEKEAEIVAQAGKL 493
Query: 381 YAITISTNMAGRGTDIILGGNPKMLAK 407
A+T++TNMAGRGTDI+LGGN + LAK
Sbjct: 494 GAVTVATNMAGRGTDIMLGGNAEYLAK 520
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 167/348 (47%), Gaps = 65/348 (18%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ GGL ++GT HESRRIDNQLRGRAGRQGDPG +RF +SL+D++ + F +
Sbjct: 568 EADQVRAAGGLFILGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLEDDIMRLFG--SE 625
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ ++ ++ DED PI+ + + Q E F RK+++E+D+V+ QRK +Y+
Sbjct: 626 RVMGMMEKLGVDEDTPIDAKILSNAIENAQKQVESRNFQTRKTVLEYDDVMNTQRKVIYE 685
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ +L G N + + +Q ++ +I V
Sbjct: 686 QRRKVLDGEN------LKESVQTMLSTVISTEVQA------------------------- 714
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
+ EL +D N+ + FRG+ + K +D
Sbjct: 715 ----------------HMGELKHMDAENWR-----EVCAQFRGLFLRPDEFK-----FTD 748
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + +A T+LL++ DI +E+ + M+E+ER ++++ +D +W D+
Sbjct: 749 EELQQYDAQALTDLLQERASDIY------ARKEAELGEPLMRELERVMMLRVVDEYWMDN 802
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ M L + +R++G +P+ YK +G F SM++A + T+ +
Sbjct: 803 IDAMQELRQGIGLRAYGQNDPVVAYKKEGYEMFESMIAAIQAETIRRI 850
>gi|292669365|ref|ZP_06602791.1| preprotein translocase [Selenomonas noxia ATCC 43541]
gi|292649000|gb|EFF66972.1| preprotein translocase [Selenomonas noxia ATCC 43541]
Length = 879
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALAGQGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSEGQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 203 R---ALHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VR + +I
Sbjct: 260 QKTVAPADSAVPKIEKIVGITNLYAPENIELSHCFTAALRAKALMHRDRDYVVRGDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P IR+D P + T K+ + V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYKLPVIVIPTNKPVIRIDEPDVIYKTKAAKYRAVGRAVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S +LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSGVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEELGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDRLGMEEDEPIEHTIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 618 RKKILLG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPKGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E++ E
Sbjct: 676 KKEELEQLARDEIQEELEKVAE 697
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
M+E+E+ V+++ +D W DHL +M+ L +N+R++G RNPL EYKI+ F M
Sbjct: 712 MRELEKVVMLRVVDQKWMDHLDHMDMLREGINLRAYGQRNPLVEYKIEALTMFEEM 767
>gi|422344172|ref|ZP_16425098.1| preprotein translocase, SecA subunit [Selenomonas noxia F0398]
gi|355377491|gb|EHG24708.1| preprotein translocase, SecA subunit [Selenomonas noxia F0398]
Length = 879
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALAGQGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSEGQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 203 R---ALHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VR + +I
Sbjct: 260 QKTVAPADSAVPKIEKIVGITNLYAPENIELSHCFTAALRAKALMHRDRDYVVRGDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P IR+D P + T K+ + V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYKLPVIVIPTNKPVIRIDEPDVIYKTKAAKYRAVGRAVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S +LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSGVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEELGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDRLGMEEDEPIEHAIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 618 RKKILLG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPKGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E++ E
Sbjct: 676 KKEELEQLARDEIQEELEKVAE 697
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
M+E+E+ V+++ +D W DHL +M+ L +N+R++G RNPL EYKI+ F M
Sbjct: 712 MRELEKVVMLRVVDQKWMDHLDHMDMLREGINLRAYGQRNPLVEYKIEALTMFEEM 767
>gi|227498004|ref|ZP_03928180.1| IISP family type II (general) secretory pathway protein SecA
[Actinomyces urogenitalis DSM 15434]
gi|226832583|gb|EEH64966.1| IISP family type II (general) secretory pathway protein SecA
[Actinomyces urogenitalis DSM 15434]
Length = 925
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/433 (50%), Positives = 281/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHLGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R+HRFLGL+ G I G P ERR Y DITY N+E GFDYLRDN+A E LV
Sbjct: 139 DLMGRIHRFLGLTTGCILAGQSPAERRQQYAMDITYGTNNEFGFDYLRDNMAQRPEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG A+ DV + Y AKVAE L G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPATGDVNKWYQEFAKVAERLTAGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GIA E L ++L++ EN P F+ NA+KAKE + D YIVR+G+ L
Sbjct: 256 KKRTVGVLAPGIARVEDYLGIDNLYESENTPLIGFLNNAIKAKELFHLDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + + R K + ++E G+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIRTDQPDLVYKSVRSKLQAVVDDIEERHAAGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS +L ++GIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEQLSQMLTRRGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 170/360 (47%), Gaps = 53/360 (14%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++
Sbjct: 530 AALEAAREACKAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSME 589
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F+ + A +++ +D+P+E + + + Q E + IRK+++++D
Sbjct: 590 DDLMRMFA--SGLAQRIMASDAYPDDVPLESKMVSKAIASAQRQVESRNYEIRKNVLKYD 647
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ QR+ VY R+ +L G E Q+ + VD ++ + P W LD L
Sbjct: 648 DVMTEQREKVYSERRRVLDG--EDLEPQMEAFRARTVDTVVASRTSEGR-PDQWDLDALW 704
Query: 695 KEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKS 754
+ + G++ + +L ++ L +L + R
Sbjct: 705 DDLAHL-------YPVGLTKNEILGAVGSLDQLTA---------------------ERLG 736
Query: 755 SSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAV 814
+ L A+ +D + L D N V ++ M+ +ER V
Sbjct: 737 AELTEDAAVAYEDAERR-------------LDD-------NPVALAQLGPEPMRTLERRV 776
Query: 815 LVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
L+ +D WR+HL M+ L + +R+ R+PL EY +G F +M+ R TVE +
Sbjct: 777 LLAVVDKRWREHLYEMDYLKEGIGLRAMAQRDPLVEYANEGAHMFKAMMEGIREETVEQV 836
>gi|444910054|ref|ZP_21230242.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Cystobacter fuscus DSM 2262]
gi|444719652|gb|ELW60444.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Cystobacter fuscus DSM 2262]
Length = 945
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 278/430 (64%), Gaps = 29/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH G IAEM+T +VTVNDYLA+RDAE
Sbjct: 82 RHYDVQLIGGMFLHQGCIAEMRTGEGKTLTATLPSYLNALSNRGVHIVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+HRFLG++ G I + +R+ YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 QMGRIHRFLGMTTGCILHELNDRQRQEAYRADITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG +Y KV LV Y ++ K+
Sbjct: 202 ---ELNYAIVDEVDSILIDEARTPLIISGPTDDTTDKYYKVDKVIPGLVPDQDYILDEKH 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT+ GI + L +L+D + V AL+A YRRD Y+VR+G+ +I+
Sbjct: 259 KSVSLTDAGIEKVQKRLSIANLYDPGEIETLHHVDQALRAHTLYRRDRDYVVRDGEVMIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RRWS+G+HQAVEAKEG+ I+ ++ +A I++Q+ F++Y KLSGMTGTA T
Sbjct: 319 DEFTGRLMKGRRWSDGLHQAVEAKEGVNIENENQTLATISFQNYFRMYSKLSGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V VPTN P +R DL + T R K+E +++E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLEVRVVPTNRPMVRQDLEDVVYKTEREKFEAVCKDIEELHKKGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE ++ L ++GIPHNVLNA K REA+ +AQAGRK AITISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVASFLSKRGIPHNVLNA--KQHEREADIIAQAGRKGAITISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAK 407
LGGNP+ +AK
Sbjct: 497 LGGNPETMAK 506
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L + S E EV GGL +IGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D
Sbjct: 544 ALAKFKAQTSREREEVMAAGGLCIIGTERHESRRIDNQLRGRAGRQGDPGTSRFYLSLED 603
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F + L+ R+ +E IE + R + Q E + F IRK+L+E+D+
Sbjct: 604 DLMRIFG--SERISGLMERLGMEEGEVIEHVWLSRAIESAQRRVEGHNFDIRKNLLEYDD 661
Query: 636 VLEVQRKHVYDLRQSILTGA 655
V+ QR+ +Y LR+ +L
Sbjct: 662 VMNQQRRTIYKLRRKVLAAG 681
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+E + + +++ ++ LV ++D W+DHL+ M+ L + +R +G ++P +EYK +G
Sbjct: 780 AREEEFGEEFLRFLQVRYLV-SIDTLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGY 838
Query: 857 RFFISMLSA 865
F+ ML A
Sbjct: 839 SGFMQMLGA 847
>gi|269914509|pdb|3JV2|A Chain A, Crystal Structure Of B. Subtilis Seca With Bound Peptide
gi|269914510|pdb|3JV2|B Chain B, Crystal Structure Of B. Subtilis Seca With Bound Peptide
Length = 783
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 85 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 144
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 145 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 202
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 203 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 261
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 262 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 321
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 322 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 381
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 382 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 441
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 442 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 499
Query: 400 GNPKMLA 406
K L
Sbjct: 500 EGVKELG 506
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 499 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 559 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 588
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 589 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 636
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 637 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 682
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 683 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 730
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 731 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 769
>gi|329944320|ref|ZP_08292579.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
170 str. F0386]
gi|328531050|gb|EGF57906.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
170 str. F0386]
Length = 944
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/433 (49%), Positives = 282/433 (65%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A + LV
Sbjct: 139 DLMGRVHRFLGLTTGCILVGQAPAERREQYACDITYGTNNEFGFDYLRDNMAQRPDDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG A+ DV + Y A ++E L +G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPATGDVNKWYKEFATISERLREGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 256 KKRTVGVLSSGIERVEDYLGVDNLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + T K + ++ +G+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIREDQPDLVYTTVEAKLDAVVDDIAERHEVGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L+++GIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEILSERLRERGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 163/375 (43%), Gaps = 84/375 (22%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
LS KD C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+
Sbjct: 532 LSAAKDA---CRAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSM 588
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+D++ + F+ + A ++S +D+P+E + R + G Q E + IRK+++++
Sbjct: 589 EDDLMRMFA--SGLAQRIMSSGAYPDDVPLESKMVTRGIAGAQRQVESRNYEIRKNVLKY 646
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
D+V+ QR+ VY R+ +L G E QI + V I+ + P W LD L
Sbjct: 647 DDVMTEQREKVYSERRRVLDG--EDLEPQIEAFRAQAVSSIVNAGTAEGR-PDEWDLDAL 703
Query: 694 LKEF--IAIAGKILDDLFAGISGDTLLKS---IEELPE---------LNSIDINNFYFPD 739
E + G D++ + G L S I+EL E ID N
Sbjct: 704 WAELGRLYPVGLTQDEVVEALGGKDALTSESLIDELSEDVAVAYEDAEARIDANALAHAQ 763
Query: 740 LPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE 799
L + P R + R+ IL+A +E
Sbjct: 764 LGEEP--MRTLERR----------------------------------ILLAVVDKRWRE 787
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
Y+ Y+KE + +R+ R+PL EY +G R F
Sbjct: 788 HLYEMDYLKE--------------------------GIGLRAMAQRDPLVEYANEGARMF 821
Query: 860 ISMLSATRRLTVESL 874
+M+ R TVE +
Sbjct: 822 RAMMEGIREETVEQI 836
>gi|397904227|ref|ZP_10505148.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Caloramator australicus RC3]
gi|343178974|emb|CCC58047.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Caloramator australicus RC3]
Length = 832
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/435 (47%), Positives = 281/435 (64%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ++GG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MKHFRVQLLGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+VG+I + EERR Y CDITY N+E GFDYLRDN+ E++V
Sbjct: 139 EWMGKIYEFLGLTVGVITHDLDAEERRRAYNCDITYGTNNEFGFDYLRDNMVIYKEEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+LIDE R PL+ISG K Y VA L + Y V+ K
Sbjct: 199 R---DLHYAIIDEVDSILIDEARTPLIISGAGEKSTRLYEVADMFVRTLKKDEDYEVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++V LT+ GI AE + D EN V+ ALKA +RD+ Y+V++G+ +I
Sbjct: 256 QHAVTLTQSGIDKAEKFFNLENYADPENMEIQHHVIQALKAHALMKRDIDYVVKDGEVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F+LY K++GMTGTA+
Sbjct: 316 VDEFTGRLMYGRRYSDGLHQAIEAKEGVKIERESKTLATITFQNYFRLYEKIAGMTGTAQ 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + VI +PTN P IRVD P + T + K++ +E+ + G+PVLVG
Sbjct: 376 TEEAEFREIYGLDVIVIPTNRPMIRVDHPDVVYKTEKAKFDAIVEEIVETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GI H VLNA KY +EAE VA AG + +TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEMLSTMLKKRGIHHQVLNA--KYHEKEAEIVAHAGERGMVTIATNMAGRGTDI 493
Query: 397 ILG-GNPKMLAKKII 410
LG G ++ KII
Sbjct: 494 KLGEGVAELGGLKII 508
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 120/228 (52%), Gaps = 15/228 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPG +RF VSL+D++ + F D
Sbjct: 496 GEGVAELGGLKIIGTERHESRRIDNQLRGRAGRQGDPGCSRFYVSLEDDLMRLFGSDR-- 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
D++S++ +D PIE + + Q E F IRKSL++FD+VL QR+ +Y
Sbjct: 554 IKDIVSKLGLPDDEPIESKMVTNAIEQAQKRVEANNFEIRKSLLQFDDVLNRQREIIYSQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFI--AIAGKIL 705
R+ +L G N I + VV I+ +V +H W L K L +I KI
Sbjct: 614 RKKVLEGEN--LKDSIQGMIIDVVTSIVNAHVTDDRHREEWDL-KGLSRYIEDVFMVKIS 670
Query: 706 DDLFAGISGDTLLKSIEELPELNSIDINNFY-FPDLPKPPNLFRGIRR 752
+ +S D +L+ I + IN Y + N+FR I R
Sbjct: 671 EQQLDPLSKDEILEKITDT-------INKAYEEKEKEFEENIFREIER 711
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+E+ER VL++T+D W DH+ M L + +R++ HR+P++EY+I+G F M+ +
Sbjct: 706 FREIERVVLLRTVDTKWIDHIDAMEHLKQGIGLRAYRHRDPVQEYQIEGMNMFDEMIYSI 765
Query: 867 RRLTVESL 874
+ T+ L
Sbjct: 766 KEDTLRFL 773
>gi|320104303|ref|YP_004179894.1| protein translocase subunit secA [Isosphaera pallida ATCC 43644]
gi|319751585|gb|ADV63345.1| protein translocase subunit secA [Isosphaera pallida ATCC 43644]
Length = 1237
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 280/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G+IAEM T VVTVNDYLA+RDA
Sbjct: 101 MRHYDVQLLGGIVLHGGNIAEMVTGEGKTLVATLPAYLNALTGQGVHVVTVNDYLARRDA 160
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ LGL+V IQ M P RR YRCDITY N+E GFDYLRDN+ + E +
Sbjct: 161 EWMSPLYQGLGLTVDAIQADMDPRRRRRAYRCDITYGTNNEFGFDYLRDNMKPDRE---L 217
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+ P ++AI+DEVDS+LIDE R PL+ISG A DV +Y A ++A L +G H+ ++ K
Sbjct: 218 QAQGPLNYAIIDEVDSILIDEARTPLIISGPAFDDVRKYTEADRIARQLKRGEHFEIKEK 277
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ LTE G+ AE + N W + NALKA Y RD +Y+V++G+ +I
Sbjct: 278 ERTCHLTEAGVREAERLAGVESFYTPGNMEWPHLIDNALKAHYLYERDREYMVKDGEIVI 337
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I+E TGR+ R+WS+G+HQAVEAKE +KI+ ++ +A IT Q+ FKLY KL+GMTGTA
Sbjct: 338 IDEFTGRLMTGRQWSDGLHQAVEAKERVKIKEENQTLATITLQNFFKLYRKLAGMTGTAM 397
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ +PT+ P R++ P + F T + K++ QE+ + GRP+LVG
Sbjct: 398 TEANEFYKVYGLDVVAIPTHRPMKRINYPDKIFKTEKEKFDAIIQEIREIHATGRPILVG 457
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSV SE LS +L GIPH VLNA KY +E+E +AQAG + +TI+TNMAGRGTDI
Sbjct: 458 TTSVAKSERLSKVLTMHGIPHAVLNA--KYHEKESEIIAQAGARGRVTIATNMAGRGTDI 515
Query: 397 ILGGNPKMLA 406
+LGGNP+ A
Sbjct: 516 VLGGNPEYQA 525
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
Query: 502 MYPLGPTVAL-TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
MYP V + + + + E EG + LGGLH+IGT HESRRIDNQLRGRAGR
Sbjct: 540 MYPTRLDVPIEVWKAAVAKYEPTMKAEGRAIAELGGLHIIGTERHESRRIDNQLRGRAGR 599
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPGS+RF +SL+D++ ++F D +A +I+ D + IE + RQ+ E
Sbjct: 600 QGDPGSSRFFLSLEDDLMRRFIGD--FAARMIASGLPDGEA-IESPMVSRQVQNAIKKIE 656
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ F IRK+L+E+DEV++ QR+ +Y RQ IL G
Sbjct: 657 ERNFDIRKNLLEYDEVMDQQRRRIYTFRQRILDG 690
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 800 SRYDDVY---MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+R D +Y M+++E+ ++++ LD W +HL M+ L ++V +R + +P EYK +G
Sbjct: 1066 ARLDQLYRPEMRDMEKMLVLQILDNLWMEHLRAMDHLRASVGLRGYAQVDPKSEYKREGV 1125
Query: 857 RFF 859
+ F
Sbjct: 1126 KLF 1128
>gi|256545450|ref|ZP_05472812.1| preprotein translocase, SecA subunit [Anaerococcus vaginalis ATCC
51170]
gi|256398846|gb|EEU12461.1| preprotein translocase, SecA subunit [Anaerococcus vaginalis ATCC
51170]
Length = 922
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/453 (45%), Positives = 288/453 (63%), Gaps = 50/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ++GG VLH+G IAEMKT +VTVNDYLA+RD
Sbjct: 96 MKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVETLPAYLNALDGKGVHIVTVNDYLAKRDQ 155
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGL+VG I G+ ER+ NY CDITY N++ GFDYLRDN+ + +V
Sbjct: 156 EWMGKVYSFLGLTVGCIIYGLTNSERQKNYNCDITYGTNNQFGFDYLRDNMVIYKDNMVQ 215
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R H+AIVDEVDS+LIDE R PL+ISGE + Y A +
Sbjct: 216 RG---LHYAIVDEVDSILIDEARTPLIISGEGDESTDTYVKADEFIKGLEGRILDPNEDL 272
Query: 144 -------ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNAL 195
E +V+ + + V+ K S LTE+G A AE +L D E+ A ++ NAL
Sbjct: 273 DQDPFDREFVVEKVDFLVDEKRKSSNLTEQGTAKAEKFFGIENLSDPEHLELAHYINNAL 332
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
KA RD+ Y+V NG+ +I++E TGR+ + RR+S+G+HQA+EAKEG+++Q++S +A
Sbjct: 333 KANTTMTRDIDYVVNNGEVMIVDEFTGRIMQGRRYSDGLHQAIEAKEGVEVQSESKTLAT 392
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KLSGMTGTAKTEE+EF +++ + V+E+PTN P RVD + GK
Sbjct: 393 ITFQNYFRMYDKLSGMTGTAKTEEEEFSEIYNLDVVEIPTNKPIQRVDDVDYVYINENGK 452
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ +E++ + G+P+LVG+ S+ENSE LS+ LK++ I H VLNA K REA+ VA
Sbjct: 453 YNAIIEEIKRVHATGQPILVGTISIENSEKLSNALKKEKIKHVVLNA--KNHEREADIVA 510
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
QAGR ++TI+TNMAGRGTDI+LGGN +AK+
Sbjct: 511 QAGRLNSVTIATNMAGRGTDIMLGGNADHMAKQ 543
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ +GGL++IG+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + +
Sbjct: 590 EAKKVREVGGLYIIGSERHESRRIDNQLRGRSGRQGDPGKSRFFISLKDDLIR---LNVG 646
Query: 587 WAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
+ + ED PI + R + Q E F RK ++++D+V+ QR +Y
Sbjct: 647 EQISKFVENYNYPEDEPIVSKMVTRSIEKAQTRVEANNFATRKRVLQYDDVMNKQRTIIY 706
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIA 701
+ R+ +L G N S I ++ + + ++ +P P W + LL +IA
Sbjct: 707 NERKQVLYGENMRDS--ILGMIKDSISQSVYSFTNPQVKPENWEMVALLNHLKSIA 760
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T L Y+ + Y N +E ++ + M+EVER VL++ +D W +H+ +M+++
Sbjct: 775 TQEKLIDYIYQTSLEKYEN--KEKQFGEENMREVERVVLLRVIDTKWMEHIDSMDQMRKE 832
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ VR+ G+ +P+ Y G + M +A + TV
Sbjct: 833 IGVRAMGNDDPVRAYTNTGFDMYEEMTNAIQEETV 867
>gi|451943486|ref|YP_007464122.1| preprotein translocase subunit SecA [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451902873|gb|AGF71760.1| preprotein translocase subunit SecA [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 867
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/428 (47%), Positives = 285/428 (66%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGAALHFGNVAEMRTGEGKTLTSVLPAYLNALEGKGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL VG+I + P +R+ Y DITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 MMGRVHRFLGLEVGVILSELRPADRKKAYAADITYGTNNELGFDYLRDNMARSLNDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F IVDEVDS+LIDE R PL+ISG Y V A++A + +G+HY V+ +
Sbjct: 200 G---HNFCIVDEVDSILIDEARTPLIISGPVDGSSQFYNVFAQLAPRMKEGIHYEVDHRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 RTVGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKEGVEIKNENQTLATITLQNYFRLYEKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+++PTN PN R D + + T K+ +++ GRPVLVG+
Sbjct: 377 EAAELHQIYKLDVVQIPTNKPNQREDHADRVYKTQEAKFAAVVEDIVEHVEAGRPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ HNVLNA KY +EAE +AQAG +T+STNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLQKRGVKHNVLNA--KYHDKEAEIIAQAGLPGNVTVSTNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP +L
Sbjct: 495 LGGNPDIL 502
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 108/178 (60%), Gaps = 11/178 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G +V GGL+V+GT HESRRIDNQLRGR+GRQGDPGSTRF +S++DE+ +F +
Sbjct: 540 GEQVVEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGSTRFYLSMRDELMVRFVGQSME 599
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK +Y
Sbjct: 600 --NMMNRLNVPDDVPIEAKMVTNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVIYAE 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
R+ IL ++ I +Y++ ++DE I VD Y W LD+L A+ G
Sbjct: 658 RREILE------AKDIAEYIRNMIDETIGAYVDGATATGYVEDWDLDELWNALEALYG 709
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER +++ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 762 MRNIERMIILPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMKDGV 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|385806976|ref|YP_005843373.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 267]
gi|383804369|gb|AFH51448.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 267]
Length = 847
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR+ Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLEVGVILANMQPTERRAAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 257 RTVGIKEEGVAYVEDQLGIENLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQRRGVKHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV++ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 542 EVRKAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++ + QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYSRTMNEQRKVIYSERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I + +Q ++D+ I VD Y W LD L ++ G
Sbjct: 660 EILESAD------IAENIQKMIDDTIGAYVDGATANGYVEDWDLDALWNALESLYG 709
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|326387819|ref|ZP_08209425.1| preprotein translocase subunit SecA [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207865|gb|EGD58676.1| preprotein translocase subunit SecA [Novosphingobium
nitrogenifigens DSM 19370]
Length = 914
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/431 (48%), Positives = 279/431 (64%), Gaps = 36/431 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMIGGIVLHRGEIAEMRTGEGKTLVATLATYLNAIERKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGL+VG+I + EERR Y DITY N+ELGFDYLRDN+ Q+V
Sbjct: 141 EWMGQLYRFLGLTVGVIVPNLNEEERREAYNSDITYATNNELGFDYLRDNMKHERGQMVH 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++AIVDEVDS+LIDE R PL+ISG ++D + VA + HY + K
Sbjct: 201 R---PFNYAIVDEVDSILIDEARTPLIISG-PTEDKSELYVAVDQVVKHIAPEHYEADEK 256
Query: 158 NNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
+V LTE+G+ AE E ++L+D EN + ALKA ++RD+ YIV+
Sbjct: 257 QKTVTLTEDGVEWAERQFEQAGLLVGSNLYDVENTMVVHHLDQALKANVMFKRDIDYIVK 316
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +II+E TGR+ + RRWS G+HQAVEAKEG++I+ ++ +A IT+Q+ F++YPKL G
Sbjct: 317 DGKVVIIDEFTGRMMDGRRWSNGLHQAVEAKEGVRIEPENQTMASITFQNYFRMYPKLGG 376
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF +++M V+ +PTN+P RVD + + K+ + + + G
Sbjct: 377 MTGTAATEAPEFYDIYKMNVVTIPTNVPVQRVDEEDEFYKNTHDKFAAIARLIRERYETG 436
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+ S+E SE LSD L +G+ HNVLNAR + EA VAQAGR A+TI+TNMA
Sbjct: 437 QPVLVGTVSIEKSELLSDFLNAEGVKHNVLNAR--FHEMEAHIVAQAGRLGAVTIATNMA 494
Query: 391 GRGTDIILGGN 401
GRGTDI LGGN
Sbjct: 495 GRGTDIQLGGN 505
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 496 IDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
+D + A P GP + ++ + + E +V GGL VIGT HESRRIDNQLR
Sbjct: 510 VDDELAEMPEGPERD----AAIERIKAEVAEEKRKVLEAGGLCVIGTERHESRRIDNQLR 565
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGL 615
GR+GRQGDPG ++F + L+D++ + F DT +A + + + + E I + + +
Sbjct: 566 GRSGRQGDPGLSKFYLCLEDDLLRIFGPDTMFAKMMNANLADGE--AIGSRYLSKAIEIA 623
Query: 616 QISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
Q E + IRK +VE+D+V+ QRK +Y+ R I+ E+ + + V+ ++
Sbjct: 624 QKKVEARNYDIRKQVVEYDDVMNDQRKVIYEQRADIMDA--EAVGDVVIDMRRDTVNTLV 681
Query: 676 FGNVDPLKHPRYWSLDKL 693
+P W ++ L
Sbjct: 682 ADACPAGSYPEQWDVEGL 699
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+E+A+L++ LD +W++HL ++ L V +R++ + P+ EYK + F ML R
Sbjct: 754 LEKAILLERLDYYWKEHLATLDALRQVVFLRAYAQKTPINEYKQEAFGLFEKMLEGIR 811
>gi|300779608|ref|ZP_07089464.1| preprotein translocase subunit SecA [Corynebacterium genitalium
ATCC 33030]
gi|300533718|gb|EFK54777.1| preprotein translocase subunit SecA [Corynebacterium genitalium
ATCC 33030]
Length = 856
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/428 (47%), Positives = 280/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH GS+AEMKT +VTVNDYLA+RDAE
Sbjct: 80 KHYKVQIMGGAALHFGSVAEMKTGEGKTLTSVLPAYLNGLGGEGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL+VG+I + P ER+ Y CDITY N+E GFDYLRDN+ + E +V R
Sbjct: 140 MMGRVHRFLGLTVGVILSDLRPPERKEAYACDITYGTNNEFGFDYLRDNMTKSVEDMVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG Y V A++A + G+HY V+ +
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPTDSTSQFYTVFAQLAPRMKAGIHYDVDQRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V ++E G+ E L ++L+ EN ++ NA+KAKE + RD YIVR G+ LI+
Sbjct: 257 RTVGVSEVGVEYVEDQLGIDNLYAPENSSLVSYLNNAIKAKELFTRDKDYIVRQGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGR+ RR++EG+HQA+EAKEG++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DAFTGRILPGRRYNEGMHQAIEAKEGVEIKNENQTLATVTLQNYFRLYNKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +P N PNIR D + T K+ +++ G+PVLVG+
Sbjct: 377 EAAELSQIYKLGVVAIPPNKPNIRKDHDDLIYKTQEAKFAAVAEDIAEHVNKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ HNVLNA KY E +A+AG +T+STNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLTRKGVKHNVLNA--KYHEEEGRIIAEAGLPGNVTVSTNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEVL 502
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 111/189 (58%), Gaps = 13/189 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV+ GGL+VIGT HESRRIDNQLRGR+GRQGDPG TRF +S++DE+ +F +
Sbjct: 540 GDEVRDAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGETRFYLSMRDELMVRFV--GAS 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + R + G Q E F RK+++++DEVL QRK VY
Sbjct: 598 MENMMNRLNVPDDVPIEAGMVSRSIKGAQSQVENQNFETRKNVLKYDEVLNEQRKVVYRE 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKI 704
R+ IL S+ I ++ ++D+ + VD Y W LD+L ++ G
Sbjct: 658 RREILD------SKDIKDQIRRMIDDTVGAYVDGATMDGYVEDWDLDQLWTALDSLYGPS 711
Query: 705 L--DDLFAG 711
+ D+L G
Sbjct: 712 MTPDELIDG 720
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRNVERMVILPIIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMNDGV 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|225017336|ref|ZP_03706528.1| hypothetical protein CLOSTMETH_01262 [Clostridium methylpentosum
DSM 5476]
gi|224949889|gb|EEG31098.1| hypothetical protein CLOSTMETH_01262 [Clostridium methylpentosum
DSM 5476]
Length = 915
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 285/446 (63%), Gaps = 44/446 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQIIGG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MRHFPVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+R+LGL+VGLI + ++RR Y DITY N+ELGFDYLRDN+ EQ V
Sbjct: 139 EWMGKVYRYLGLTVGLIIHDLDNDDRRKAYAADITYGTNNELGFDYLRDNMCIYKEQKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA---------KVAELLVQ 148
R F++AIVDEVDS+LIDE R PL+ISG+ K Y +A KVAE+ +
Sbjct: 199 R---EFNYAIVDEVDSILIDEARTPLIISGQGDKSTELYTIADGFAKTLTMYKVAEMDEK 255
Query: 149 GLH------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
H Y V+ K + LT G+ AE +L D EN + A+KA
Sbjct: 256 EEHDDIEADYIVDEKAKTATLTPFGVKKAESYFNVENLTDMENMTLLHHINQAIKAHGIM 315
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
RD Y+V++G+ +I++E TGR+ RR++EG+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 316 HRDTDYVVKDGEVIIVDEFTGRLMIGRRYNEGLHQAIEAKEGVKVERESKTLATITFQNF 375
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F+LY KLSGMTGTA TEE EF +++++ V+E+PTN P R D + T GK+ +
Sbjct: 376 FRLYTKLSGMTGTAMTEESEFREIYKLDVVEIPTNRPVQRKDYDDSVYKTENGKFLAVIE 435
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
++ G+PVLVG+ S+E SE LS +LK++G+ H+VLNA KY REAE VAQAG+K
Sbjct: 436 QIIESHEKGQPVLVGTISIEKSELLSSMLKKRGVKHSVLNA--KYHEREAEIVAQAGKKG 493
Query: 382 AITISTNMAGRGTDIILGGNPKMLAK 407
A+TI+TNMAGRGTDI+LGGN + +AK
Sbjct: 494 AVTIATNMAGRGTDIMLGGNAEFMAK 519
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 177/366 (48%), Gaps = 69/366 (18%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
TY + + + + E EV+ GGL ++GT H+SRRIDNQLRGRAGRQGDPG++RF +
Sbjct: 552 TYKELNEKYKKEIATEAEEVREAGGLFILGTERHDSRRIDNQLRGRAGRQGDPGASRFYL 611
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
SL+D++ + F + +L++ + +ED PIE + + Q E F IRK+ +
Sbjct: 612 SLEDDLMRLFGGERIQ--NLMNALKIEEDQPIENKMLSNSIESAQRKVEGRNFSIRKNTL 669
Query: 632 EFDEVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS 689
+FD+V+ QR+ +Y R +L G N + +Q + +++ VD + N D + W+
Sbjct: 670 QFDDVMNAQREIIYGQRGKVLNGENLKDYIAQMMSEWIGETVDRYL--NDDEVHDN--WN 725
Query: 690 LDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
+D L F+ + D + G+ EL E+N DI
Sbjct: 726 IDGLRDYFLNVLTTEDDLKYEGV----------ELGEINKEDI----------------- 758
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
++ L D + Y +ES +M+E
Sbjct: 759 --------------------------------KQVLRDKAVEKYTE--KESLIGSEHMRE 784
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ER ++++ +D W DH+ M+ L +++R++G R+P+ EY+++G F M+++ +
Sbjct: 785 LERVIMLRVVDTKWMDHIDAMDELRRGMHLRAYGQRDPIVEYRLEGFDMFDEMIASIKED 844
Query: 870 TVESLV 875
TV L+
Sbjct: 845 TVRMLL 850
>gi|325849485|ref|ZP_08170766.1| preprotein translocase, SecA subunit [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480105|gb|EGC83180.1| preprotein translocase, SecA subunit [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 904
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/453 (45%), Positives = 287/453 (63%), Gaps = 50/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ++GG VLH+G IAEMKT VVTVNDYLA+RD
Sbjct: 78 MKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVETLPAYLNALDGKGVHVVTVNDYLAKRDQ 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGL+VG I G+ ER+ NY CDITY N++ GFDYLRDN+ + +V
Sbjct: 138 EWMGKVYSFLGLTVGCIIYGLTNSERQKNYNCDITYGTNNQFGFDYLRDNMVIYKDNMVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R H+AIVDEVDS+LIDE R PL+ISGE + Y A +
Sbjct: 198 RG---LHYAIVDEVDSILIDEARTPLIISGEGDESTDTYKKADEFIKGLEGRILDPNEDL 254
Query: 144 -------ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNAL 195
E +V+ + + V+ K S LTE+G A AE +L D E+ A ++ NAL
Sbjct: 255 DQDPFDREFVVEKVDFLVDEKRKSSNLTEQGTAKAEKFFGIENLSDPEHLELAHYINNAL 314
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
KA RD+ Y+V G+ +I++E TGR+ + RR+S+G+HQA+EAKEG+++Q++S +A
Sbjct: 315 KANTTMTRDIDYVVNKGEVMIVDEFTGRIMQGRRYSDGLHQAIEAKEGVEVQSESKTLAT 374
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KLSGMTGTAKTEE+EF +++ + V+E+PTN P RVD + GK
Sbjct: 375 ITFQNYFRMYDKLSGMTGTAKTEEEEFSEIYNLDVVEIPTNRPIQRVDDVDYVYINENGK 434
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ +E++ + G+P+LVG+ S+ENSE LS+ LK++ I H VLNA K REA+ VA
Sbjct: 435 YNAIIEEIKKVHATGQPILVGTISIENSEKLSNALKKEKIKHVVLNA--KNHEREADIVA 492
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
QAGR ++TI+TNMAGRGTDI+LGGN +AK+
Sbjct: 493 QAGRLNSVTIATNMAGRGTDIMLGGNADHMAKQ 525
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ +GGL++IG+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + +
Sbjct: 572 EAKKVREVGGLYIIGSERHESRRIDNQLRGRSGRQGDPGKSRFFISLKDDLIR---LNVG 628
Query: 587 WAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
+ + ED PI + R + Q E F RK ++++D+V+ QR +Y
Sbjct: 629 EQISKFVENYNYPEDEPIVSRMVTRSIEKAQTRVEANNFATRKRVLQYDDVMNKQRTIIY 688
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIA 701
+ R+ +L G N S I ++ + + ++ +P P W + LL +IA
Sbjct: 689 NERKQVLYGENMRDS--ILSMIKDSISQAVYSFTNPQIKPENWEMVALLNHLKSIA 742
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 773 RYRATTNLLRKYLGDILIASYLNVVQES--RYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
R+ + ++ L D + + LN +E ++ + M+EVER VL++ +D W +H+ M
Sbjct: 749 RFENINDYTQEKLIDYIYQTTLNKYEEKEKQFGEDNMREVERVVLLRVIDTKWMEHIDAM 808
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+++ + VR+ G+ +P+ Y G + M ++ + TV
Sbjct: 809 DQMRKEIGVRAMGNDDPVRAYTNSGFEMYEEMTNSIQEETV 849
>gi|212697038|ref|ZP_03305166.1| hypothetical protein ANHYDRO_01603 [Anaerococcus hydrogenalis DSM
7454]
gi|212675813|gb|EEB35420.1| hypothetical protein ANHYDRO_01603 [Anaerococcus hydrogenalis DSM
7454]
Length = 907
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/453 (45%), Positives = 287/453 (63%), Gaps = 50/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ++GG VLH+G IAEMKT VVTVNDYLA+RD
Sbjct: 81 MKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVETLPAYLNALDGKGVHVVTVNDYLAKRDQ 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGL+VG I G+ ER+ NY CDITY N++ GFDYLRDN+ + +V
Sbjct: 141 EWMGKVYSFLGLTVGCIIYGLTNSERQKNYNCDITYGTNNQFGFDYLRDNMVIYKDNMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R H+AIVDEVDS+LIDE R PL+ISGE + Y A +
Sbjct: 201 RG---LHYAIVDEVDSILIDEARTPLIISGEGDESTDTYKKADEFIKGLEGRILDPNEDL 257
Query: 144 -------ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNAL 195
E +V+ + + V+ K S LTE+G A AE +L D E+ A ++ NAL
Sbjct: 258 DQDPFDREFVVEKVDFLVDEKRKSSNLTEQGTAKAEKFFGIENLSDPEHLELAHYINNAL 317
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
KA RD+ Y+V G+ +I++E TGR+ + RR+S+G+HQA+EAKEG+++Q++S +A
Sbjct: 318 KANTTMTRDIDYVVNKGEVMIVDEFTGRIMQGRRYSDGLHQAIEAKEGVEVQSESKTLAT 377
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KLSGMTGTAKTEE+EF +++ + V+E+PTN P RVD + GK
Sbjct: 378 ITFQNYFRMYDKLSGMTGTAKTEEEEFSEIYNLDVVEIPTNRPIQRVDDVDYVYINENGK 437
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ +E++ + G+P+LVG+ S+ENSE LS+ LK++ I H VLNA K REA+ VA
Sbjct: 438 YNAIIEEIKKVHATGQPILVGTISIENSEKLSNALKKEKIKHVVLNA--KNHEREADIVA 495
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
QAGR ++TI+TNMAGRGTDI+LGGN +AK+
Sbjct: 496 QAGRLNSVTIATNMAGRGTDIMLGGNADHMAKQ 528
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ +GGL++IG+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + +
Sbjct: 575 EAKKVREVGGLYIIGSERHESRRIDNQLRGRSGRQGDPGKSRFFISLKDDLIR---LNVG 631
Query: 587 WAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
+ + ED PI + R + Q E F RK ++++D+V+ QR +Y
Sbjct: 632 EQISKFVENYNYPEDEPIVSRMVTRSIEKAQTRVEANNFATRKRVLQYDDVMNKQRTIIY 691
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIA 701
+ R+ +L G N S I ++ + + ++ +P P W + LL +IA
Sbjct: 692 NERKQVLYGENMRDS--ILSMIKDSISQAVYSFTNPQIKPENWEMVALLNHLKSIA 745
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 773 RYRATTNLLRKYLGDILIASYLNVVQES--RYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
R+ + ++ L D + + LN +E ++ + M+EVER VL++ +D W +H+ M
Sbjct: 752 RFENINDYTQEKLIDYIYQTTLNKYEEKEKQFGEDNMREVERVVLLRVIDTKWMEHIDAM 811
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+++ + VR+ G+ +P+ Y G + M ++ + TV
Sbjct: 812 DQMRKEIGVRAMGNDDPVRAYTNSGFEMYEEMTNSIQEETV 852
>gi|257785088|ref|YP_003180305.1| preprotein translocase subunit SecA [Atopobium parvulum DSM 20469]
gi|257473595|gb|ACV51714.1| preprotein translocase, SecA subunit [Atopobium parvulum DSM 20469]
Length = 916
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/436 (46%), Positives = 286/436 (65%), Gaps = 29/436 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ+IGG LH G+IAEMKT +VTVNDYLA+RD+E
Sbjct: 81 RHFDVQLIGGIALHKGTIAEMKTGEGKTLVSTLAGYLNALSGEGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +++FLG++VGL+Q GM ++ Y DITY NSE GFDYLRDN+ E MR
Sbjct: 141 WMGTIYKFLGITVGLLQNGMRLSLKKPAYEADITYGTNSEFGFDYLRDNMVTRPE---MR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+ H+AIVDEVDS+LIDE R PL+ISG +K Y AK L+ + + ++
Sbjct: 198 VQRGHHYAIVDEVDSILIDEARTPLIISGAGTKSAGTYKDFAKAVRGLIPDVDFEMDEAK 257
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+++ TE G+ E AL +D++ DE+ + ALKA+ + RD QY+V +G+ I+
Sbjct: 258 HTIATTEIGLEKVERALNIDDIYNDESGQLVNHLQQALKAEYMFHRDQQYVVIDGEVKIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E RR+SEG+HQA+EAKE ++++ ++ +A IT Q+ F +Y KLSGMTGTA T
Sbjct: 318 DEFTGRIMEGRRYSEGLHQAIEAKENVQVREENQTLATITLQNYFLMYDKLSGMTGTAMT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E+ EF +++ +PV +P N P R DL + T K+E ++VE + G+PVLVG+
Sbjct: 378 EDAEFREVYHVPVQVIPPNRPVKREDLDDLVYRTIDAKFEAVVKDVEERHQNGQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S++NSE +S +L ++GI HNVLNA K+ REA+ +AQAGRK A+TI+TNMAGRGTDI+
Sbjct: 438 VSIDNSERISRILSKRGIKHNVLNA--KFHEREAQIIAQAGRKGAVTIATNMAGRGTDIL 495
Query: 398 LGGNPKMLAKKIIEDR 413
LGGNP ++A+ I+ ++
Sbjct: 496 LGGNPDVMAEDILRNQ 511
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 108/192 (56%), Gaps = 15/192 (7%)
Query: 518 KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
K+ + C+ E V GGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +SL+D++
Sbjct: 528 KEAKEICAAEREAVTDAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGQTQFYLSLEDDL 587
Query: 578 FQKFSFDTSWAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
++F D V ++ R +DMPI+ + + + G Q E+ F +RK+++++D+V
Sbjct: 588 MRRFGGDRMDGVAAMMQRYELPDDMPIKARIVTKLVEGAQRKVEEVNFAMRKNVLDYDDV 647
Query: 637 LEVQRKHVYDLRQSILTGAN-----ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD 691
+ QR+ +Y R IL G + E+ + Q V +E +G+ D W L+
Sbjct: 648 MNKQRQVIYAERNKILDGKDLMGLIETVTAST---TQRVCEEFCYGDADE------WDLE 698
Query: 692 KLLKEFIAIAGK 703
L K + GK
Sbjct: 699 GLEKWLSELTGK 710
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M+E+ V+++ +D W +L M+ L + + +R FG R+PL EYK + F +++
Sbjct: 749 MRELAAQVMLRVIDTRWMAYLQEMDYLKTGIGLRGFGQRDPLVEYKTEAYEAFTLLVN 806
>gi|300789803|ref|YP_003770094.1| preprotein translocase subunit SecA [Amycolatopsis mediterranei
U32]
gi|384153317|ref|YP_005536133.1| preprotein translocase subunit SecA [Amycolatopsis mediterranei
S699]
gi|399541685|ref|YP_006554347.1| preprotein translocase SecA subunit [Amycolatopsis mediterranei
S699]
gi|299799317|gb|ADJ49692.1| preprotein translocase SecA subunit [Amycolatopsis mediterranei
U32]
gi|340531471|gb|AEK46676.1| preprotein translocase subunit SecA [Amycolatopsis mediterranei
S699]
gi|398322455|gb|AFO81402.1| preprotein translocase SecA subunit [Amycolatopsis mediterranei
S699]
Length = 964
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 309/490 (63%), Gaps = 56/490 (11%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G +AEMKT VVT NDYLA+RD+E
Sbjct: 79 RHFDVQLMGGAALHLGQVAEMKTGEGKTLTCVLPAYLNAIPGKGVHVVTTNDYLAKRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM R+HRFLGL VG+I P+ RR+ Y DITY N+E GFDYLRDN+A + + V R
Sbjct: 139 WMGRIHRFLGLEVGVILSEQQPDVRRAQYNADITYGTNNEFGFDYLRDNMAWSLDDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
++AIVDEVDS+LIDE R PL+ISG A + Y A++ L+ G+
Sbjct: 199 G---HNYAIVDEVDSILIDEARTPLIISGPADQSSRWYVEFARLVPLM-NGIDTTTMGSR 254
Query: 151 -------------HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALK 196
HY ++++ +V +TE+G+ E L ++L++ N P ++ NALK
Sbjct: 255 ERVEKTNLINSKYHYEIDVRKRTVAVTEKGVRFVEDQLGIDNLYEAANTPLVGYLNNALK 314
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
+E + RD YIVRNG+ +I++E TGR+ RR++EG+HQA+EAKE ++I+A++ +A I
Sbjct: 315 VQELFHRDKDYIVRNGEVMIVDEFTGRILHGRRYNEGMHQAIEAKEKVEIKAENQTLATI 374
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T Q+ F+LY KL+GMTGTA+TE EF + +++ V+ +PTN P IRVD + T + K+
Sbjct: 375 TLQNYFRLYEKLAGMTGTAETEAAEFHQTYKLGVVPIPTNRPMIRVDQADLIYKTEQAKF 434
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
E +++ G+PVLVG+TSVE SE+LS LL + +PH VLNA K+ REA VA+
Sbjct: 435 EAVAEDIAERHEKGQPVLVGTTSVEKSEHLSKLLVKLSVPHEVLNA--KHHDREALIVAR 492
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKV 436
AG+K A+T++TNMAGRGTDI+LGGNP ++A +++ +R L + + + + + P+V
Sbjct: 493 AGQKGAVTVATNMAGRGTDIVLGGNPDLIADQVLRERGL-----DPVEHSEEYEAAWPEV 547
Query: 437 LSEIKLGSSS 446
L ++K S +
Sbjct: 548 LEQVKAESKA 557
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL+ + EG EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 547 VLEQVKAESKAEGEEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 606
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ ++F+ V R+ + D+PIE + + + Q E+ RK ++++DE
Sbjct: 607 ELMRRFNATMVERVMTTMRLPD--DVPIEHKMVSKAIKSAQTQVEQINMEQRKDVLKYDE 664
Query: 636 VLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVD-EIIFGNVDPLKHPRYWSLDK 692
V+ QRK +Y R +L G N + + + A VD G + H + W+ K
Sbjct: 665 VMNEQRKVIYAERHRVLAGENLRDQIEGMLVDVVNAYVDGATASGYAEDWDHEKLWTALK 724
Query: 693 LL 694
L
Sbjct: 725 TL 726
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +E V++ LD WR+HL M+ L + +R+ R+PL EY+ +G F +ML +
Sbjct: 775 MRTLEHQVMLTVLDRKWREHLYEMDYLKQGIGMRALAQRDPLIEYQREGFDMFRAMLDSL 834
Query: 867 RRLTV 871
+ V
Sbjct: 835 KEEAV 839
>gi|321313076|ref|YP_004205363.1| preprotein translocase subunit SecA [Bacillus subtilis BSn5]
gi|320019350|gb|ADV94336.1| preprotein translocase subunit SecA [Bacillus subtilis BSn5]
Length = 841
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 155/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS L +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDILGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|16080583|ref|NP_391410.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311480|ref|ZP_03593327.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315807|ref|ZP_03597612.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320722|ref|ZP_03602016.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325007|ref|ZP_03606301.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. SMY]
gi|384177162|ref|YP_005558547.1| Preprotein translocase subunit secA [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|402777693|ref|YP_006631637.1| translocase binding ATPase [Bacillus subtilis QB928]
gi|418031252|ref|ZP_12669737.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|430756689|ref|YP_007207968.1| Preprotein translocase SecA [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452913323|ref|ZP_21961951.1| preprotein translocase, SecA subunit [Bacillus subtilis MB73/2]
gi|134396|sp|P28366.1|SECA_BACSU RecName: Full=Protein translocase subunit SecA
gi|216334|dbj|BAA01122.1| secA protein [Bacillus subtilis]
gi|1762349|gb|AAC44957.1| involved in protein export [Bacillus subtilis subsp. subtilis str.
168]
gi|2636056|emb|CAB15547.1| translocase binding subunit (ATPase) [Bacillus subtilis subsp.
subtilis str. 168]
gi|349596386|gb|AEP92573.1| Preprotein translocase subunit secA [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|351472311|gb|EHA32424.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|402482872|gb|AFQ59381.1| Translocase binding subunit (ATPase) [Bacillus subtilis QB928]
gi|407962366|dbj|BAM55606.1| preprotein translocase subunit SecA [Bacillus subtilis BEST7613]
gi|407966380|dbj|BAM59619.1| preprotein translocase subunit SecA [Bacillus subtilis BEST7003]
gi|430021209|gb|AGA21815.1| Preprotein translocase SecA [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452118351|gb|EME08745.1| preprotein translocase, SecA subunit [Bacillus subtilis MB73/2]
Length = 841
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|297626169|ref|YP_003687932.1| preprotein translocase subunit SecA [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296921934|emb|CBL56494.1| Preprotein translocase SecA subunit [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 949
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/436 (49%), Positives = 283/436 (64%), Gaps = 29/436 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQI+GGA LH+G++AEMKT VVTVNDYLAQ AE
Sbjct: 80 RPFDVQIMGGAALHEGNVAEMKTGEGKTIVALAPSYLNALDGKGVHVVTVNDYLAQSQAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH FLGL G+I M P+ERR Y CDITY N+E GFDYLRDN+A + V
Sbjct: 140 QMGRVHHFLGLKTGVILAPMAPDERRRAYACDITYGTNNEFGFDYLRDNMALTLDDCVQN 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFAIVDEVDS+LIDE R PL+ISG A+++ YP A++A L + Y V+ K
Sbjct: 200 G---HHFAIVDEVDSILIDEARTPLIISGPATENKQWYPEFARLAVRLERDTDYEVDEKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + GI + E L ++L++ N P ++ NA+KAKE ++RD Y+V +G+ LI+
Sbjct: 257 RTVSVLAHGIEVTESDLGIDNLYESANTPLIGYLNNAIKAKELFKRDKDYVVIDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+ + +A IT Q+ F++Y KLSGMTGTAKT
Sbjct: 317 DEHTGRVLAGRRYNEGLHQALEAKEKVEIKDEYQTLATITLQNYFRMYDKLSGMTGTAKT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++ + V+E+PTN P IR D + + K+ +V G+PVL+G+
Sbjct: 377 EEDEFQKVYGLGVLEIPTNKPMIRKDQSDLIYRSEDAKFTAIVDDVVERHDNGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SV SE LS L+ GIPH VLNA K AREA VAQAGRK A+T++TNMAGRGTDI+
Sbjct: 437 ASVVKSEELSRRLRAAGIPHQVLNA--KQHAREAAVVAQAGRKGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDR 413
LGGNP+ LA +++ +R
Sbjct: 495 LGGNPEFLADQLLRER 510
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 122/229 (53%), Gaps = 21/229 (9%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ L D E ++E EV GGL+V+G+ HESRRIDNQLRGR+GRQGDPG +RF +S
Sbjct: 525 WADTLSDLEGQVADEHEEVVDAGGLYVLGSERHESRRIDNQLRGRSGRQGDPGESRFYLS 584
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + V ++ + ED PIE + R + Q E F RK++++
Sbjct: 585 LEDDLLRLFKPEAVERV--MTSMQLPEDQPIEMKLLSRSIESAQKQLEAQNFETRKNVLK 642
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNV--DPLKHPRYWSL 690
+D+V+ QR +Y R+ +L GA+ + +++ VD ++ V W L
Sbjct: 643 YDDVMNRQRHVIYRDRRKVLEGAD------VEGMLRSTVDRVVESAVRMHTQGFSDEWDL 696
Query: 691 DKL---LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
D L +++ ++ K+ D + GI ++++EL + D + Y
Sbjct: 697 DALWNDMRQLYPVSLKVAD--YDGI------ENVDELVDDFKADAQDAY 737
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E+ER V + LD WRDHL M+ L + +R+ R+PL EYK +G F +M +A
Sbjct: 749 MRELERQVWLTVLDRKWRDHLYEMDYLREGIGLRAMAQRDPLVEYKREGADMFDAMRAA 807
>gi|24158966|pdb|1M6N|A Chain A, Crystal Structure Of The Seca Translocation Atpase From
Bacillus Subtilis
gi|24158967|pdb|1M74|A Chain A, Crystal Structure Of Mg-Adp-Bound Seca From Bacillus
Subtilis
Length = 802
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|428281125|ref|YP_005562860.1| preprotein translocase subunit SecA [Bacillus subtilis subsp. natto
BEST195]
gi|291486082|dbj|BAI87157.1| preprotein translocase subunit SecA [Bacillus subtilis subsp. natto
BEST195]
Length = 841
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYQKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|300857940|ref|YP_003782923.1| preprotein translocase subunit [Corynebacterium pseudotuberculosis
FRC41]
gi|300685394|gb|ADK28316.1| preprotein translocase subunit [Corynebacterium pseudotuberculosis
FRC41]
Length = 849
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 82 KHYLVQVMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR+ Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 142 WMGRVHRWLGLEVGVILANMQPTERRAAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 202 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 258
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 259 RTVGIKEEGVAYVEDQLGIENLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 319 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 379 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 439 TSVERSEYLSRLLQRRGVKHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 496
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 497 LGGNPDIIADINLRERGL 514
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 544 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 601
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 602 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 661
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I + +Q ++D+ I VD Y W LD L ++ G
Sbjct: 662 EILESAD------IAENIQKMIDDTIGAYVDGATANGYVEDWDLDALWNALESLYG 711
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 764 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 823
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 824 KEETVRQL 831
>gi|374601530|ref|ZP_09674530.1| preprotein translocase subunit SecA [Paenibacillus dendritiformis
C454]
gi|374392865|gb|EHQ64187.1| preprotein translocase subunit SecA [Paenibacillus dendritiformis
C454]
Length = 836
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/434 (47%), Positives = 286/434 (65%), Gaps = 30/434 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VLH+G IAEMKT VVTVNDYLA RD+E
Sbjct: 81 RHYDVQLLGGMVLHEGKIAEMKTGEGKTLVGTLPVYLNALAGKGVHVVTVNDYLATRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++++FLG++VGL GM P ++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYQFLGMTVGLNLAGMDPGMKKEAYGCDITYGTNNEYGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +FAI+DEVDS+LIDE R PL+ISG+A+K Y +A + L YT+++K
Sbjct: 201 ---PLNFAIIDEVDSILIDEARTPLIISGQAAKSTELYHIADTFVKTLKPEEDYTIDVKT 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE G++ AE L +L+D +N V+ ALKA RRDV Y+V +G+ +I+
Sbjct: 258 RQVALTEAGVSKAEKVLGVENLFDVKNVTLNHHVLQALKANSIMRRDVDYVVNDGEIVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE L++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRMMAGRRYSDGLHQAIEAKEKLEVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF ++ + VI++PTN PN R D P + T K+ +E+ + +PVLVG+
Sbjct: 378 EEEEFKSIYGLEVIQIPTNKPNQRKDGPDIVYKTENAKYNAVVEEIVKRHQKQQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LSD L+++G+ H VLNA K+ EAE +++AG +TI+TNMAGRGTDII
Sbjct: 438 VSIENSELLSDKLRKKGVKHQVLNA--KFHREEAEIISRAGEPGQVTIATNMAGRGTDII 495
Query: 398 LG-GNPKMLAKKII 410
LG G P++ II
Sbjct: 496 LGEGVPELGGLHII 509
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVPELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLGMMERLGFEEDQPIESKLITRAVESAQKRVEGNNFDLRKVVLQYDDVMNQQREIIYRQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L E+ Q + ++ ++ + + + P W L +++
Sbjct: 615 RHEVLEA--ENIRQIVMDMIKPCIERTVDAHCNEDDIPENWDLQEIV 659
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
D +TK+ + + + ++L D ++A Y + + V +E E+ V+++ +D W D
Sbjct: 670 DTITKDDLWGKEKDEIVEFLFDKVVAQYTEREERLGEELV--REFEKVVVLRAVDSKWMD 727
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
H+ M+ L +++R++G +PL EY+ +G F +M+++ + E + QY
Sbjct: 728 HIDAMDHLRQGIHLRAYGGTDPLREYQFEGYEMFNNMVASIQ----EEVSQY 775
>gi|375288105|ref|YP_005122646.1| preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 3/99-5]
gi|384504120|ref|YP_005680790.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 1002]
gi|392400075|ref|YP_006436675.1| preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis Cp162]
gi|302330220|gb|ADL20414.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 1002]
gi|371575394|gb|AEX38997.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 3/99-5]
gi|390531153|gb|AFM06882.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis Cp162]
Length = 847
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR+ Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLEVGVILANMQPTERRAAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 257 RTVGIKEEGVAYVEDQLGIENLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQRRGVKHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I + +Q ++D+ I VD Y W LD L ++ G
Sbjct: 660 EILESAD------IAENIQKMIDDTIGAYVDGATANGYVEDWDLDALWNALESLYG 709
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|383313700|ref|YP_005374555.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis P54B96]
gi|384506213|ref|YP_005682882.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis C231]
gi|384508301|ref|YP_005684969.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis I19]
gi|384510395|ref|YP_005689973.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis PAT10]
gi|387136062|ref|YP_005692042.1| preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302205669|gb|ADL10011.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis C231]
gi|308275904|gb|ADO25803.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis I19]
gi|341824334|gb|AEK91855.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis PAT10]
gi|348606507|gb|AEP69780.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 42/02-A]
gi|380869201|gb|AFF21675.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis P54B96]
Length = 847
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 291/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR+ Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLEVGVILANMQPTERRAAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 257 RTVGIKEEGVAYVEDQLGIENLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQRRGVKHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 108/176 (61%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV++ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 542 EVRKAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I + +Q ++D+ I VD Y W LD L ++ G
Sbjct: 660 EILESAD------IAENIQKMIDDTIGAYVDGATANGYVEDWDLDALWNALESLYG 709
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|51247655|pdb|1TF2|A Chain A, Crystal Structure Of Seca:adp In An Open Conformation From
Bacillus Subtilis
gi|51247656|pdb|1TF5|A Chain A, Crystal Structure Of Seca In An Open Conformation From
Bacillus Subtilis
Length = 844
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/427 (48%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 85 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 144
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 145 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 202
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 203 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 261
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 262 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 321
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 322 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 381
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 382 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 441
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 442 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 499
Query: 400 GNPKMLA 406
K L
Sbjct: 500 EGVKELG 506
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 499 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 559 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 588
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 589 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 636
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 637 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 682
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 683 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 730
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 731 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 769
>gi|349701028|ref|ZP_08902657.1| preprotein translocase subunit SecA [Gluconacetobacter europaeus
LMG 18494]
Length = 913
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/438 (50%), Positives = 283/438 (64%), Gaps = 39/438 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLSALAGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLGLSVG++ M +ERR+ YR DITY N+E GFDYLRDN+ E +V
Sbjct: 141 DQMGKLYEFLGLSVGVVVPNMPEDERRAAYRADITYGTNNEFGFDYLRDNMKYRVEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA--SKDVARYPVAAKVAELLVQGLHYTVE 155
R PFH AIVDEVDS+LIDE R PL+ISG A S D+ R VA L+ Y +
Sbjct: 201 R---PFHHAIVDEVDSILIDEARTPLIISGPAEDSSDLYRAVDEVMVA-LVADPEAYEKD 256
Query: 156 LKNNSVELTEEGIALAEM------ALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYI 208
K SV LTE+G E L L+D N+ V +L+A + RDV YI
Sbjct: 257 EKFRSVILTEKGAEQVEELLRGAGVLHEGGLYDSNNVAVIHHVQQSLRAHTLFTRDVDYI 316
Query: 209 VRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 268
VR GK +II+E TGR+ E RR+S+G+HQA+EAKE +++Q ++ +A IT+Q+ F++YP+L
Sbjct: 317 VRGGKVVIIDEFTGRMMEGRRYSDGLHQALEAKEHVEVQQENQTLASITFQNYFRMYPRL 376
Query: 269 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 328
SGMTGTA TE EF ++++ VIE+PTNLP R D + + TAR K+E ++ + +
Sbjct: 377 SGMTGTAMTEADEFADIYKLDVIEIPTNLPVARKDDDDEVYLTAREKYEAVANLIKDISK 436
Query: 329 L-GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIST 387
G+PVLVG+TS+E SEYLS LL+Q GI HNVLNAR + EAE VAQAG AITI+T
Sbjct: 437 TSGQPVLVGTTSIEKSEYLSSLLRQHGIKHNVLNAR--FHELEAEIVAQAGAPGAITIAT 494
Query: 388 NMAGRGTDIILGGNPKML 405
NMAGRGTDI LGGN ML
Sbjct: 495 NMAGRGTDIKLGGNVDML 512
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V++ GGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F D +
Sbjct: 544 VRKAGGLYVIGTERHESRRIDNQLRGRAGRQGDPGNSRFFISLEDDLMRIFGTDRMG--N 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ E I I + L Q E F +RK+ +++D+V+ QRK VY R+
Sbjct: 602 MLQKLGLKEGEAIVHPWINKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVYAQRRE 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
+ A E S I + + V+ +++ + P W D+L ++
Sbjct: 662 YM--AAEDVSPIITEMREDVIHDMVARRIPEKSFPEQWLKDELAQD 705
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VE+ VL+ T D W++HL+ +++L + +R++G ++PL E+K + F +ML
Sbjct: 754 MRYVEKQVLLTTFDAVWKEHLLALDQLRQGIGLRAYGQKDPLNEFKHEAFELFHAMLDHL 813
Query: 867 RRLTVESLVQYWSSP 881
R ++ + +P
Sbjct: 814 RVRVTSTMARVEMAP 828
>gi|386760148|ref|YP_006233365.1| preprotein translocase subunit SecA [Bacillus sp. JS]
gi|384933431|gb|AFI30109.1| preprotein translocase subunit SecA [Bacillus sp. JS]
Length = 841
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHIVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R ++ +E+ + + +++ ++ I + P W LD L++
Sbjct: 614 RFEVID--SENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVE 659
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 787 DILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRN 846
D +I Y +E ++ M+E E+ ++++ +D W DH+ M++L +++R++ N
Sbjct: 690 DRIITKY--NAKEEQFGTEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTN 747
Query: 847 PLEEYKIDGCRFFISMLSA 865
PL EY+++G F M+ +
Sbjct: 748 PLREYQMEGFAMFEHMIES 766
>gi|392395511|ref|YP_006432113.1| protein translocase subunit secA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390526589|gb|AFM02320.1| protein translocase subunit secA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 834
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/422 (48%), Positives = 279/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VLHDG IAEM+T +VTVNDYLA+RD+E
Sbjct: 79 RHYDVQLIGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGRGVHIVTVNDYLARRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+H+FLGLSVGLI G+ +RR +Y DITY N+E GFDYLRDN+ + LV R
Sbjct: 139 MMGRIHQFLGLSVGLIVHGLNYVQRRESYAADITYGTNNEFGFDYLRDNMVTRPDGLVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A + L Y V K+
Sbjct: 199 ---ELHYAIVDEVDSILIDEARTPLIISGEADKPTELYDRIAMIIPRLKPEEDYNVNEKD 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L +L+D+ + A V LKA ++RD Y+V++G+ +I+
Sbjct: 256 RVVTLTEQGVSRVETMLSVENLFDDLHTELAHHVNQGLKAHALFKRDRDYVVKDGQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +KI+ +S +A IT+Q+ F+++ KL+GMTGTA T
Sbjct: 316 DEFTGRLMFGRRYSEGLHQAIEAKEKVKIEKESQTLATITFQNYFRMFEKLAGMTGTAMT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN P IR D+ + T GK++ +E+ + G+PVLVG+
Sbjct: 376 EEPEFKKIYKLDVVEIPTNKPMIRADISDVVYRTEDGKFKAVVEEIIERHKKGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE LS +L+++GIPH VLNA K+ +EAE +A AG K +TI+TNMAGRGTDII
Sbjct: 436 VSVEKSERLSSMLERRGIPHQVLNA--KFHEKEAEIIAGAGLKGMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 8/170 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 495 GEEVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRLFGADN-- 552
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ D+ +PI I R + Q E F IRK ++++D+V+ +QR+ +Y
Sbjct: 553 ITGMMDKLGMDDSIPITSKMISRSVETAQRRVENRNFEIRKHVLDYDDVMNLQREVIYAQ 612
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ +L G N ES + + + ++ VD +FG P +P W L+ L+
Sbjct: 613 RRQVLMGGNIQESIADMLEKVVRETVD--MFGAQSP--YPEEWDLNSFLE 658
>gi|221632433|ref|YP_002521654.1| Preprotein translocase subunit SecA [Thermomicrobium roseum DSM
5159]
gi|221156212|gb|ACM05339.1| preprotein translocase, SecA subunit [Thermomicrobium roseum DSM
5159]
Length = 881
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/448 (47%), Positives = 286/448 (63%), Gaps = 54/448 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++ G VLH+G IAEMKT +VT NDYL++
Sbjct: 98 MRHFDVQLMAGIVLHEGKIAEMKTGEGKTLVATLPLYLNALLGRGCHLVTPNDYLSRVGG 157
Query: 38 EWMERVHRFLGLSVGLIQRGMI----------------------PEERRSNYRCDITYTN 75
WM ++ FLG+SVG+I P RR Y DITY
Sbjct: 158 GWMGPIYHFLGVSVGVITHEFAGIYDPTYIQPDPSPDDRLNHWRPVSRREAYLADITYGT 217
Query: 76 NSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR 135
N E GFDYLRDNL E +V R ++AIVDEVD++LIDE R PL+ISG+A + V R
Sbjct: 218 NHEFGFDYLRDNLVYRPEDIVQR---ELYYAIVDEVDNILIDEARTPLIISGQARETVDR 274
Query: 136 YPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMAL---ETNDLWDENDPWA-RFV 191
Y A++A L + +HYTV+LK+ +V LTE GI E L E + L+D+ A ++
Sbjct: 275 YYQFAQIARQLRRDVHYTVDLKHRTVTLTEAGIDRVERLLGIPEGHSLYDDRYSDAVHYL 334
Query: 192 MNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSV 251
ALKAKE Y RD YIVR+G+ +I++E TGR+ RR+SEG+HQA+EAKEGL+++ ++V
Sbjct: 335 EQALKAKELYLRDRDYIVRDGEVIIVDEFTGRMMPGRRYSEGLHQAIEAKEGLRVRQETV 394
Query: 252 VVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFAT 311
A ITYQ+ F++Y KL+GMTGTA TE +EF ++ + V+ +PT+ P IR+D P + T
Sbjct: 395 TQATITYQNYFRMYEKLAGMTGTAATEAEEFQTIYNLEVVVIPTHKPMIRIDYPDVIYRT 454
Query: 312 ARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREA 371
GK+ +E+E M +GRPVLVG+TS+E SEYLSDLLK++GIPH VLNA K+ REA
Sbjct: 455 EEGKFRAVVREIEEMHAIGRPVLVGTTSIEKSEYLSDLLKRKGIPHEVLNA--KHHEREA 512
Query: 372 ETVAQAGRKYAITISTNMAGRGTDIILG 399
VA+AG++ A+TI+TNMAGRGTDI+LG
Sbjct: 513 LIVAKAGQRGAVTIATNMAGRGTDIVLG 540
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 151/336 (44%), Gaps = 70/336 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHVIGT HE+RRIDNQLRGRAGRQGDPGS+RF VSL+DE+ ++ T
Sbjct: 540 GPGVAELGGLHVIGTERHEARRIDNQLRGRAGRQGDPGSSRFYVSLEDELLKRVG--TER 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ D++ PIE + R + Q E Y F +RK LVE+D V+ QR
Sbjct: 598 IQGLLEKLGMDDEHPIESPLVSRMIEEAQKKIEGYNFDLRKHLVEYDSVINKQR------ 651
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
E+I+G+ + + G+ + +
Sbjct: 652 -------------------------EVIYGDRRKI-----------------VMGENMRE 669
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
G+ L K++++ F D P P ++ R + SD
Sbjct: 670 HVLGMVRRQLEKAVKQA----------FESADEPDPESVLRAFA--------GIVGDSDG 711
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
LT N L + L +A Y QE + M+ +ER VL++ +D W +HL
Sbjct: 712 LTPRDLEERDENELTELLWQRALARYERREQE--FGPETMRVIERLVLLQVMDRLWIEHL 769
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
M + V ++++G +PL YK +G R F +L
Sbjct: 770 TEMEHMRHEVGLQAYGQLDPLVVYKREGYRMFQQLL 805
>gi|374296907|ref|YP_005047098.1| protein translocase subunit secA [Clostridium clariflavum DSM
19732]
gi|359826401|gb|AEV69174.1| protein translocase subunit secA [Clostridium clariflavum DSM
19732]
Length = 913
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/447 (46%), Positives = 281/447 (62%), Gaps = 44/447 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 80 MKHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGLSVGLI G+ ERR Y CDITY N+E GFDYLRDN+ E +V
Sbjct: 140 EWMGKVYNFLGLSVGLIVHGLTNAERRHAYSCDITYGTNNEFGFDYLRDNMVIYKEDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R H+AIVDEVDS+LIDE R PL+ISG+ K Y +A L
Sbjct: 200 R---DLHYAIVDEVDSILIDEARTPLIISGQGDKSTELYKIADSFVRRLKVKVFTELDDK 256
Query: 147 ----VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
Y V+ K ++ LT +GI AE +L D EN + + AL+A
Sbjct: 257 EDNDDIDADYIVDEKAHTATLTAQGIKKAEAFFGIENLSDSENLTISHHINQALRAHGLM 316
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+ D Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 317 KADRDYVVKDGEIIIVDEFTGRLMYGRRYSDGLHQAIEAKEGVKVERESKTLATITFQNY 376
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F++Y KL+GMTGTA TEE+EF ++++ VI +PTN P RVDL + GK+
Sbjct: 377 FRMYKKLAGMTGTALTEEQEFRDIYKLDVIVIPTNKPVARVDLNDVVYKNEMGKFNAVVN 436
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
+V + G+PVL+G+ S+E SE LS +LK++GIPH VLNA KY +EAE +AQAG+
Sbjct: 437 DVVERHQKGQPVLIGTISIEKSELLSSMLKKRGIPHQVLNA--KYHEKEAEIIAQAGKLG 494
Query: 382 AITISTNMAGRGTDIILGGNPKMLAKK 408
A+TI+TNMAGRGTDI+LGGNP+ LAK+
Sbjct: 495 AVTIATNMAGRGTDIMLGGNPEYLAKQ 521
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 160/337 (47%), Gaps = 67/337 (19%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F D
Sbjct: 568 EREKVVEAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYISLEDDLMRLFGSDRL 627
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ + R+ ++D PIE + Q+ Q E F IRK+++++D+V+ QR
Sbjct: 628 MGI--VERLRLEDDQPIEATMLTNQIENAQRKVEGRNFSIRKNVLQYDDVMNKQR----- 680
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
E+I+G R LD G+ L
Sbjct: 681 --------------------------EVIYGQ-------RRKVLD----------GENLK 697
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNL-FRGIRRKSSSLKRWLAICS 765
D F LK E + ++ I N Y + P P + IR S + ++ S
Sbjct: 698 DSF--------LKMFETIADI----IVNLYCSENPHPDYWDWESIR--SYAEGAYVPTGS 743
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
+ +K T LR+ + +++ Y +E M+E+ER VL++ +D W D
Sbjct: 744 LNFSKEEMENLTKESLREKILELITKRY--EEKEEELGSELMRELERVVLLRIVDQKWMD 801
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
H+ M +L +++RS+G R+P+ EYK +G F M
Sbjct: 802 HIDAMEQLKHGIHLRSYGQRDPVIEYKFEGFEMFEEM 838
>gi|427406561|ref|ZP_18896766.1| preprotein translocase, SecA subunit [Selenomonas sp. F0473]
gi|425707991|gb|EKU71032.1| preprotein translocase, SecA subunit [Selenomonas sp. F0473]
Length = 879
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGMCLHEGRIAEMRTGEGKTLVATTAVYLNALAGRGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYASDVTFGTNNEFGFDYLRDNMVLSESQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y V A L +G YTV+ K
Sbjct: 203 R---ALHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYAVMANAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VR + +I
Sbjct: 260 QKTVAPADSAVPKIEKIVGIQNLYAPENIELSHCFTAALRAKALMHRDRDYVVRGDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYEKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P R+D P + T K+ + V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYKLPVIVIPTNKPVCRIDHPDVIYKTKAAKYRAVGRSVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++L++ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSNVLRKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 119/202 (58%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVDALGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDKLGMEEDEPIEHAIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 618 RRKILCG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPQGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E++ E
Sbjct: 676 KKEELEVLARDEIQELLEQIAE 697
>gi|225175295|ref|ZP_03729290.1| preprotein translocase, SecA subunit [Dethiobacter alkaliphilus AHT
1]
gi|225169047|gb|EEG77846.1| preprotein translocase, SecA subunit [Dethiobacter alkaliphilus AHT
1]
Length = 949
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 283/453 (62%), Gaps = 51/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G I+EMKT ++TVNDYLA RD
Sbjct: 119 MRHFDVQVLGGIVLHQGRISEMKTGEGKTLVATLPAYLNALTGRGVHIITVNDYLASRDR 178
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVGLI G+ P +RR +Y DITY N+E GFDYLRDN+ EQLV
Sbjct: 179 EWMGPLYEFLGLSVGLIVHGLDPVQRRESYAADITYGTNNEFGFDYLRDNMVLYREQLVQ 238
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR--YPVAAKVAELLVQGLHYTVE 155
R P H+ IVDEVDS+LIDE R PL+ISG+ D Y L + H+TV+
Sbjct: 239 R---PLHYTIVDEVDSILIDEARTPLIISGQMKDDKQEEDYSRVDSAVSRLKEETHFTVD 295
Query: 156 LKNNSVELTEEGIALAEMALETNDLWDENDP---------------------WARFVMNA 194
K +SV LTEEG E L L+ E D + V NA
Sbjct: 296 EKAHSVVLTEEGEEKVESLLGERGLYGEEDIVYEEVEEEQAQGSQEAERRNIIKKKVENA 355
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
LKA +RD Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKE +K+ +S+ +A
Sbjct: 356 LKAYGLMKRDRNYVVKDGQIIIVDEFTGRLMYGRRYSDGLHQAIEAKEKVKVAKESMTLA 415
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT+Q+ F++Y KL+GMTGTA+TEE EF ++ M V+E+PTN P IR DLP + T +G
Sbjct: 416 SITFQNYFRMYSKLAGMTGTARTEEAEFQAIYGMDVVEIPTNKPMIRQDLPDAIYKTEKG 475
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K+ + +E+ G+P+LVG+ S+E SE LS +L+++GI H VLNA K REA+ V
Sbjct: 476 KFRWVVEEIVERHNTGQPLLVGTISIETSEDLSRMLQKRGIAHEVLNA--KQHDREAKIV 533
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
AQAGR A+TI+TNMAGRGTDI+LGGN + LA+
Sbjct: 534 AQAGRLGAVTIATNMAGRGTDIVLGGNHESLAE 566
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ +L+ E E +V GGLH+IGT HESRRIDNQLRGR+GRQGD GS++F +S
Sbjct: 598 FGELLEKYERETKAEREKVVAAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSQFYIS 657
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F D + V + ++ DED I+ I R + Q E F IRK ++E
Sbjct: 658 LEDDLMRLFGGDNIFGV--MEKLGLDEDTQIDHPLITRAIETAQKKVEARNFDIRKHILE 715
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G N + +++ ++D+ I + W L
Sbjct: 716 YDDVINEQREVIYSQRRRVLEGEN--LRDTVMEWVPELIDDAIAHYASEQVYEDEWDLAG 773
Query: 693 LLK 695
LL+
Sbjct: 774 LLE 776
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E ER V+++ +D W +H+ M+ L V +R++G RNPL EYK + F M+ +
Sbjct: 825 MREAERVVILRAVDTKWMNHIDAMDDLRHGVGLRAYGQRNPLVEYKYEAYEMFNEMIRSL 884
Query: 867 RRLTVESL 874
+ V L
Sbjct: 885 KEEAVGRL 892
>gi|452993793|emb|CCQ94609.1| translocase binding subunit (ATPase) [Clostridium ultunense Esp]
Length = 907
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/451 (45%), Positives = 283/451 (62%), Gaps = 49/451 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ++GG +LH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MKHFRVQLMGGIILHQGRIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNDYLAKRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +V+ FLGL+VG I GM ER++ Y CDITY N+E GFDYLRDN+ E++V
Sbjct: 140 QWMGKVYEFLGLTVGCIVHGMNNTERKAAYNCDITYGTNNEFGFDYLRDNMVIYKEEMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R +++IVDEVDS+LIDE R PL+ISG+ + Y A
Sbjct: 200 R---KLYYSIVDEVDSILIDEARTPLIISGQGEQSTKLYEAADAFVMTLTGRIVDPKEEK 256
Query: 144 ------ELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALK 196
E+ + + + ++ K + LTE+G AE +L D N+ A + ALK
Sbjct: 257 RDPFDREIKEETVDFIIDEKARTCTLTEKGTLKAESYFGLENLADPNNMEIAHHINQALK 316
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A+ +RD+ Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKE L ++++S +A I
Sbjct: 317 ARNIMKRDIDYVVKDGEVIIVDEFTGRLMYGRRYSEGLHQAIEAKEKLNVKSESKTLATI 376
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KL+GMTGTAKTEE EF +++ M V+E+PTN P IR D P + K+
Sbjct: 377 TFQNYFRMYEKLAGMTGTAKTEEAEFREIYGMDVVEIPTNEPVIRQDFPDVVYKNEEAKF 436
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+E++ G+PVLVG+ S+E SE LS +LK++GIPH VLNA K REAE VAQ
Sbjct: 437 NAIVEEIKEKHSSGQPVLVGTISIEKSEILSKMLKKEGIPHEVLNA--KQHEREAEIVAQ 494
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
AGR AITI+TNMAGRGTDI+LGGNP+ LAK
Sbjct: 495 AGRFGAITIATNMAGRGTDIVLGGNPEYLAK 525
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 8/182 (4%)
Query: 521 EVHCSN---EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 577
E H N E EV ++GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++
Sbjct: 564 EKHKENTEKEAKEVIKVGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYISLEDDL 623
Query: 578 FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
+ F + D++ + +D P+E + R + Q E F IRK ++++D+V+
Sbjct: 624 MRLFGGER--MKDMVDSLNMPDDEPLEHKLLTRSIENAQRKVESNNFAIRKHVLQYDDVM 681
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
QR+ +Y R+ +L G E + I ++ + +E + K+P W ++ L+ F
Sbjct: 682 NKQREVIYAERRKVLEG--EDLREHILGMVRNITEEAVEIYTRQSKYPEEWDMNG-LENF 738
Query: 698 IA 699
+A
Sbjct: 739 LA 740
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 790 IASYLNVVQESRYDDV-------YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
+ L + ESRY + +E+ER +L++ +D W DH+ M++L + +R++
Sbjct: 762 LVEMLYTIGESRYREKEAEIGKEMFREIERVILLQVVDSKWMDHIDAMDQLRQGIGLRAY 821
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWS 879
G +P+ Y+ +G F M + + TV+ L S
Sbjct: 822 GQEDPVRAYQNEGFEMFEEMNHSIQEDTVKYLYHVES 858
>gi|355574767|ref|ZP_09044403.1| preprotein translocase, SecA subunit [Olsenella sp. oral taxon 809
str. F0356]
gi|354818243|gb|EHF02735.1| preprotein translocase, SecA subunit [Olsenella sp. oral taxon 809
str. F0356]
Length = 910
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/434 (47%), Positives = 282/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG LH G IAEMKT VVTVNDYLA+RD+
Sbjct: 80 LRHFDVQVIGGIALHRGMIAEMKTGEGKTLVSTLAGYLNAISGEGVHVVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLG+ VGL+Q GM + ++ Y D+TY NSE GFDYLRDN+ M
Sbjct: 140 EWMGQIYRFLGMKVGLLQNGMKLDLKKPAYEADVTYGTNSEFGFDYLRDNMVTRPG---M 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R + HFAIVDEVDS+LIDE R PL+ISG +K + Y A+ LVQ + + ++
Sbjct: 197 RVQRGHHFAIVDEVDSILIDEARTPLIISGAGTKSASTYKDFARAVRGLVQDVDFEMDEA 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+++ TE G+ E AL +D++ D + + ALKA+ + RD QY+V +G+ I
Sbjct: 257 KHTIATTEGGLRKVEAALGVDDIYGDMSGQLVNHLQQALKAQYMFHRDQQYVVVDGEVKI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 VDEFTGRIMEGRRYSEGLHQAIEAKEGVLIREENQTLATITLQNYFRLYDKLSGMTGTAM 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE+ EF +++++PV +P N P IRVD + T K+ ++V G+P LVG
Sbjct: 377 TEDAEFREIYKLPVQAIPPNKPVIRVDGNDLVYQTIDAKFRAVAEDVAQRHAKGQPCLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LS +L ++GI H VLNA KY REA+ VAQAGR+ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIESSERLSRILDKRGIRHEVLNA--KYHEREAQIVAQAGREGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKII 410
+LGGNP LA+ ++
Sbjct: 495 LLGGNPTALAEDLL 508
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 157/346 (45%), Gaps = 76/346 (21%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ E V GGL VIGT HESRRIDNQLRGR+GRQGDPG T F +SL D++ + F
Sbjct: 534 CATEREHVVAAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGETVFYLSLDDDLMRLFGG 593
Query: 584 D-TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
D L+++ DMPIE + + + Q E+ F +RK+++++D+V+ QR+
Sbjct: 594 DRMDHVAALMAKYDMPADMPIESKMVTKAVESAQRKVEEINFSMRKNVLDYDDVMNKQRQ 653
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK----HPRYWSLDKLLKEFI 698
+Y+ R IL G + + ++ V+ + + NVD + W + LLK
Sbjct: 654 VIYEERNKILDG------KDLVGHIAEVLRDTVEHNVDLYCSEDINASDWDFEGLLK--- 704
Query: 699 AIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLK 758
AG++G + +LPEL+ D+ + L
Sbjct: 705 ---------WVAGLTGRS------DLPELDE---------DMERADVL------------ 728
Query: 759 RWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKT 818
A+C D + Y + R D M+E+ V+++
Sbjct: 729 --EAVC----------------------DYVSGCYAQ--KSERLSDAIMQELSAQVMLRV 762
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
+D W +L M+ L + + +R FG R+PL EYK + F +++
Sbjct: 763 IDTRWMAYLQEMDYLKTGIGLRGFGQRDPLVEYKTEAYAAFTELVN 808
>gi|238926687|ref|ZP_04658447.1| translocase [Selenomonas flueggei ATCC 43531]
gi|238885444|gb|EEQ49082.1| translocase [Selenomonas flueggei ATCC 43531]
Length = 907
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 107 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALAGKGVHMVTVNDYLARRDS 166
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 167 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYASDVTFGTNNEFGFDYLRDNMVLSESQMVQ 226
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG +K Y + A L +G YTV+ K
Sbjct: 227 R---DLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRIMADAVRHLKEGEDYTVDEK 283
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + ++L+ EN + AL+AK RD Y+V+ + +I
Sbjct: 284 AKTVAPMDSAVPKIEKIVGISNLYAPENIELSHCFTAALRAKALMHRDRDYVVKGDEIII 343
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 344 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 403
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI +PTN P RVD P + T GK+ Q V+ + G+PVL+G
Sbjct: 404 TEENEFLKIYKLPVIVIPTNKPVRRVDEPDVIYKTKAGKYRAVGQAVKEIHETGQPVLIG 463
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S +LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 464 TTSIVQSEEMSHVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 521
Query: 397 ILG 399
LG
Sbjct: 522 KLG 524
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 119/202 (58%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 524 GEGVEALGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 583
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ DED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 584 GI--MDRLGMDEDEPIEHAIITRSVEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 641
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 642 RRKILKG--ENLRENILAMVKHIIKDEMSQYANEKLYPEEWQLDALIEDAEKVYAPKGRL 699
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
++ D + + +E++ E
Sbjct: 700 KKAELEQLARDEIQEELEKVAE 721
>gi|229819742|ref|YP_002881268.1| preprotein translocase subunit SecA [Beutenbergia cavernae DSM
12333]
gi|259496160|sp|C5C1N8.1|SECA_BEUC1 RecName: Full=Protein translocase subunit SecA
gi|229565655|gb|ACQ79506.1| preprotein translocase, SecA subunit [Beutenbergia cavernae DSM
12333]
Length = 968
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 283/430 (65%), Gaps = 30/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R DVQ++GGA LH G+IAEMKT VVTVNDYLAQ ++
Sbjct: 81 RPHDVQVMGGAALHLGNIAEMKTGEGKTLAATLPAYLNALSGDGVHVVTVNDYLAQYQSD 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLGL+ G I G PEERR +Y DITY N+ELGFDYLRDN+A +S +LV R
Sbjct: 141 LMGRVYRFLGLTTGCILSGQKPEERRRHYAADITYGTNNELGFDYLRDNMAWSSGELVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+F IVDEVDS+LIDE R PL+ISG AS D + Y A+VA L + Y V+ K
Sbjct: 201 G---HNFVIVDEVDSILIDEARTPLIISGPASGDANKWYAEFARVARRLTRESDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y+V G+ LI
Sbjct: 258 KRNVGVLEPGIEKVEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVLKGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ I+A++ +A IT Q+ F+LY KL+GMTGTA
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVAIKAENQTLATITLQNYFRLYGKLAGMTGTAM 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN+P R+D P F GK++ +++ G+PVLVG
Sbjct: 378 TEAAEFQGTYKVGVVPIPTNMPMARLDKPDLVFKNEDGKFDAVVEDIVERHAAGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LK+QG+PH VLNA K AREA VA AGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSELLSTKLKRQGVPHEVLNA--KQHAREASIVAMAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LGGN + LA
Sbjct: 496 MLGGNAEHLA 505
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 172/380 (45%), Gaps = 78/380 (20%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L++ + E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+ D
Sbjct: 530 ALEEATTSVAAEHDEVVDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMGD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F ++ A + +DMP+E + R + Q E F IRK+++++D+
Sbjct: 590 DLMRLF--NSGLAERFMGSSAYPDDMPLESKLVTRGIASAQGQVEARNFEIRKNVLKYDD 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH---PRYWSLDK 692
VL QR +Y R+ +L G + + + +Q + +++ ++ P W
Sbjct: 648 VLSRQRAVIYTDRRRVLEG------EDLAEQVQGFLTDVVTAYIESATQAGAPESWD--- 698
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
LD+L+ T LK++ +P
Sbjct: 699 ------------LDELW------TALKAV---------------YP-------------- 711
Query: 753 KSSSLKRWLAICSDDLTKNG--RYRATTNLL-RKYLGDILIASYLNVVQESRYDDVYMKE 809
++I +++ R T +L R+ L D A + +E M++
Sbjct: 712 --------ISITPEEVVSEAGNATRVTPEMLTREILSD---AEHAYARREEELTPDVMRQ 760
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G + F +M A +
Sbjct: 761 LERRVVLAVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFQLFSAMRDAIKEE 820
Query: 870 TVESLVQY---WSSPMESQE 886
V L P ES E
Sbjct: 821 AVGYLFNLEVKRPEPAESAE 840
>gi|187250474|ref|YP_001874956.1| preprotein translocase subunit SecA [Elusimicrobium minutum Pei191]
gi|259509940|sp|B2KAS3.1|SECA_ELUMP RecName: Full=Protein translocase subunit SecA
gi|186970634|gb|ACC97619.1| Preprotein translocase, SecA subunit [Elusimicrobium minutum
Pei191]
Length = 866
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/446 (46%), Positives = 281/446 (63%), Gaps = 49/446 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG VLH G IAEM+T VVTVNDYLA+RD
Sbjct: 81 LRHYDVQLLGGMVLHQGKIAEMRTGEGKTLVATLPSYLNALTGKGVHVVTVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +H FLGLSVG I R M E R+ Y+ DITY N+ELGFDYLRDN+ E V+
Sbjct: 141 NWMGPIHEFLGLSVGYINREMDNEGRQEMYKKDITYVTNNELGFDYLRDNMVVRKEDRVL 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKV--------------- 142
K ++ IVDEVDS+LIDE R PL+ISG A + +Y V ++
Sbjct: 201 ---KKLNYCIVDEVDSILIDEARTPLIISGPAEQSTDKYEVVNRIIPSLKIRKITEDDEI 257
Query: 143 -----AELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALK 196
E L G ++ KN++ LTE+GIA AE L +L+ D W + AL+
Sbjct: 258 KAKYSGENLSAGYDAVIDEKNHNATLTEDGIAKAEKFLGVANLYNDVESEWVHHINQALR 317
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A Y +DV Y+V++G+ +I++E TGR+ RRWS+G+HQAVEAKE +KI+ ++ +A I
Sbjct: 318 AHHLYEKDVDYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQAVEAKERIKIKEENQTLATI 377
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ FKLY KLSGMTGTA TE EF +++++ V+EVP N P+ RVD + T R K+
Sbjct: 378 TFQNFFKLYSKLSGMTGTAMTEAGEFWQIYKLDVVEVPPNRPSKRVDGADLVYRTEREKY 437
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
++E++++ G PVLVG+ S+E SE +S +L+ +GIPH VLNA KY EA+ ++Q
Sbjct: 438 NAIVADIETLWKKGAPVLVGTRSIEKSEKVSAMLRSKGIPHKVLNA--KYHEMEAQIISQ 495
Query: 377 AGRKYAITISTNMAGRGTDIILGGNP 402
AG K ++TI+TNMAGRGTDI+LGGNP
Sbjct: 496 AGAKGSVTIATNMAGRGTDIVLGGNP 521
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 4/165 (2%)
Query: 529 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWA 588
+EV LGGLH++GT HESRRIDNQLRGRA RQGDPGS+RF +SL DE+ + F+ +TS
Sbjct: 528 AEVVELGGLHILGTERHESRRIDNQLRGRAARQGDPGSSRFYISLDDELMRLFA-NTSRI 586
Query: 589 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
++ R+ E IE + RQ+ G Q E + F IRK L+++D+V+ QR +Y LR
Sbjct: 587 SGILERMGMTEGQVIESRLMSRQIEGAQRMVEGHNFDIRKHLLDYDKVMNQQRTAIYHLR 646
Query: 649 QSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
IL G ES S+Q+ Q ++ V+ E F +KHP+ + L
Sbjct: 647 NKILDG--ESVSEQVMQMIEEVIHE-TFDKYYNVKHPQSTDFNTL 688
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%)
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
V EVER +L++ +D W+ HL ++++ +V++R + ++PL EY+ + + +ML+
Sbjct: 739 VNFNEVERMLLLQIIDQAWKQHLYELDQMQKSVSLRGYAQKDPLIEYQKESYNLYQNMLN 798
Query: 865 ATRRLTVESLVQYWSSP 881
R + VE + + P
Sbjct: 799 KVRDVMVEYIFRLQLPP 815
>gi|120402761|ref|YP_952590.1| preprotein translocase subunit SecA [Mycobacterium vanbaalenii
PYR-1]
gi|167016616|sp|A1T5Y4.1|SECA1_MYCVP RecName: Full=Protein translocase subunit SecA 1
gi|119955579|gb|ABM12584.1| protein translocase subunit secA [Mycobacterium vanbaalenii PYR-1]
Length = 938
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 284/438 (64%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G++AEMKT +VTVN+YLA+RDAE
Sbjct: 79 RHFDVQIMGGAALHFGNVAEMKTGEGKTLTSVLPAYLNALPGKGVHIVTVNEYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL V +I + P++RR+ Y DITY N ELGFDYLRDN+A E V R
Sbjct: 139 QMGRVHRFLGLDVDVILGTLTPDQRRAAYNADITYGTNWELGFDYLRDNMALRLEDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFAIVDEVDS+LIDE R PL+ISG A Y A++A L+ +HY V++K
Sbjct: 199 G---HHFAIVDEVDSILIDEARTPLIISGPADGGSNWYTEFARLAPLMKPDVHYEVDIKK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V + E G+ E L +L++ N P ++ NA+KAKE + RD YIVRNG+ I+
Sbjct: 256 RVVGINEAGVEFVEDQLGIENLYEAANSPLISYLNNAIKAKELFERDKHYIVRNGEVFIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ VAQ+T Q+ F++Y KL+GMTGTA+T
Sbjct: 316 DEFTGRMLVGRRYNEGLHQAIEAKEHVEIKAENQTVAQVTLQNYFRMYEKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 376 EAAELHEIYKLGVVPIPTNRPMVRKDQSDLIYKTEEAKYIAVVDDVAERYEKGQPVLIGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS +++ IPHNVLNA KY +EA VA+AGR AIT++TNMAGRGTDI+
Sbjct: 436 TSVERSEFLSRQFEKRRIPHNVLNA--KYHEQEAGIVAEAGRLGAITVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + R L
Sbjct: 494 LGGNVDYLLDRRLRQRGL 511
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 11/180 (6%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + + E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 528 LPHIKAEVAAEAKDVIAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLADE 587
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++F+ T L++R+ +D+PIE + R + Q E+ F IRK ++++DEV
Sbjct: 588 LMRRFNGATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFDIRKEVLKYDEV 645
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+ QRK VY R+ IL G N + Q Q +VD +I VD Y W L+KL
Sbjct: 646 MNQQRKVVYAERRRILEGENLAG-----QAHQILVD-VITAYVDGATAEGYSEDWDLEKL 699
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ LD WR+HL M+ L + +R + P EY +G FI+ML
Sbjct: 761 MRQLERNVLLNVLDRKWREHLYEMDYLREGIGLRGLAQQRPEVEYAREGYDMFIAMLDGM 820
Query: 867 RRLTVESL--VQYWSSP 881
+ +V L VQ +P
Sbjct: 821 KEESVGFLFNVQVERAP 837
>gi|297618038|ref|YP_003703197.1| preprotein translocasesubunit SecA [Syntrophothermus lipocalidus
DSM 12680]
gi|297145875|gb|ADI02632.1| preprotein translocase, SecA subunit [Syntrophothermus lipocalidus
DSM 12680]
Length = 831
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/423 (48%), Positives = 279/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VLH G IAEMKT +VTVNDYLA RDA
Sbjct: 80 MRHFDVQILGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLASRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++R LGLSVGL+ G+ EE++ Y+ D+TY N+E GFDYLRDN+ E V
Sbjct: 140 EWMGPIYRSLGLSVGLVVHGLNHEEKQRAYQADVTYGTNNEFGFDYLRDNMVTTPEHKVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISGEA K Y AK L + Y V+ K
Sbjct: 200 R---ERYYAIVDEVDSILIDEARTPLIISGEADKPTDLYYKIAKFVPRLKPEVDYKVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ V LT+EG+A E +L D+ A V LKA +RD Y+V++GK +I
Sbjct: 257 AHLVTLTDEGVAKVEKYFGIENLGDDRYMELAHHVNQGLKAHALMKRDRDYVVKDGKVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F+LY KL+GMTGTA
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRLYEKLAGMTGTAA 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ M V+ +PT+ P IRVDLP + T GK++ +++ +R G+PVLVG
Sbjct: 377 TEEEEFRKIYGMDVVVIPTHKPMIRVDLPDFIYRTEEGKFQAVVEDIVERYRKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +L ++G+PH VLNA K+ +EA+ +A+AG+K +TI+TNMAGRGTDI
Sbjct: 437 TISIEKSERLSSMLSRRGVPHQVLNA--KHHEKEAQIIARAGQKGTVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 167/358 (46%), Gaps = 69/358 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL+V+GT HE+RRIDNQLRGR+GRQGDPG +RF VSL+D++ + F ++
Sbjct: 497 GEGVAELGGLYVLGTERHEARRIDNQLRGRSGRQGDPGESRFYVSLEDDLMRLFGSESIE 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ D+ +PIE + R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 G--LMDRLGMDDSVPIENKLVSRAIENAQKKVESRNFEIRKHVLEYDDVINQQREVIYAE 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G E ++ + M+ V + I+ K+ W L
Sbjct: 615 RDKVLYG--EDLTETVISMMEDVAELIVDRFAGEEKYADGWDL----------------- 655
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
AG+ N ++ N Y P+ P F+G+ R DD
Sbjct: 656 --AGL--------------FNYVERN--YIPEPDFGPEEFKGMTR-------------DD 684
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ K G + + S D M+ +++ +L++ +D W DH+
Sbjct: 685 VVS----------FLKEKGRLFYEK-----RRSEMGDETMQALQKVLLLRIIDDKWMDHI 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSPME 883
M++L + +R++G R+PL EYK + F M+++ + V + V+ S P E
Sbjct: 730 DAMDQLRHGIGLRAYGQRDPLVEYKFEAYNAFQDMVASIKEDVVRYVFRVKVVSQPRE 787
>gi|383776049|ref|YP_005460615.1| putative preprotein translocase SecA subunit [Actinoplanes
missouriensis 431]
gi|381369281|dbj|BAL86099.1| putative preprotein translocase SecA subunit [Actinoplanes
missouriensis 431]
Length = 968
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/443 (47%), Positives = 290/443 (65%), Gaps = 34/443 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+I EMKT ++TVNDYLAQRDAE
Sbjct: 80 RAYDVQLMGGAALHFGNIPEMKTGEGKTLTGVFPAYLNALSGKGVHIITVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
W+ RVH FLGL+VG+I E R+ Y+CDITY N+E GFDYLRDN+A + +LV R
Sbjct: 140 WVGRVHVFLGLTVGVILPNRPATEHRAAYQCDITYGTNNEFGFDYLRDNMAWSKTELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FAIVDEVDS+LIDE R PL+ISG A Y +++ L G Y V
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPAEHSARWYGEFSQIVNRLQPGKDGEGDYEV 256
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVR-NG 212
++ +V +TE G+A E L ++L++ N P ++ NA+KAKE Y++D YIV G
Sbjct: 257 DVAKRTVAITERGVAKVEDRLGIDNLYESVNTPLVGYLNNAIKAKELYKKDKDYIVSPEG 316
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ LI++E TGR+ RR++EG+HQA+EAKEG++++ ++ +A IT Q+ F+LY KL GMT
Sbjct: 317 EVLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEVKQENQTLATITLQNYFRLYEKLGGMT 376
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA+TE EF ++++ V+ +PT+ P +R+D P + T R K+ +++ G+P
Sbjct: 377 GTAQTEAGEFNSVYKVGVVSIPTHRPMVRIDHPDVIYKTERAKFNAVIEDIAERHVTGQP 436
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+ SVENSE LS LL+++GIPH+VLNA K+ A+EA +AQAGRK A+T++TNMAGR
Sbjct: 437 VLVGTVSVENSEILSTLLRKRGIPHSVLNA--KFHAQEATIIAQAGRKGAVTVATNMAGR 494
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGNP LA + R L
Sbjct: 495 GTDILLGGNPDFLAASELTQRGL 517
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E SEV+ GGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SLQD
Sbjct: 533 VLPSVKEACEQEASEVQAAGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLQD 592
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ ++F AV + R ED+PIE + RQ+ Q E IRK+++++DE
Sbjct: 593 DLMKRFRAGAVEAV--MERFNIPEDVPIESKMVTRQIRSAQTQIEAQNAEIRKNVLKYDE 650
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV-DEIIFGNVDPLKHPRYWSLDKL 693
VL QR+ VY R+ +L G E Q+ + VV D ++ D + W L++L
Sbjct: 651 VLNKQRQVVYAERRRVLNG--EDMHDQVTHMIDDVVADYVLAATSD--GYAEDWDLEQL 705
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER VL+ +D WR+HL M+ L +++R++ R+P+ EY+ +G F M+
Sbjct: 762 VRELERQVLLAVIDRKWREHLYEMDYLQEGISLRAYAQRDPVVEYQREGFDMFNQMMEGI 821
Query: 867 RRLTV 871
+ V
Sbjct: 822 KEEAV 826
>gi|354558918|ref|ZP_08978171.1| Protein translocase subunit secA [Desulfitobacterium
metallireducens DSM 15288]
gi|353545242|gb|EHC14694.1| Protein translocase subunit secA [Desulfitobacterium
metallireducens DSM 15288]
Length = 833
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/422 (48%), Positives = 279/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VLHDG IAEM+T V+TVNDYLA+RD+E
Sbjct: 79 RHYDVQLVGGMVLHDGRIAEMRTGEGKTLVATLPSYLNALTGRGVHVITVNDYLARRDSE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++H+FLGLSVGLI G+ ERR +Y DITY N+E GFDYLRDN+ E LV R
Sbjct: 139 WMGQIHQFLGLSVGLIVHGLNYAERRESYAADITYGTNNEFGFDYLRDNMVTRPEALVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F+IVDEVDS+LIDE R PL+ISGEA K Y A++ L Y + K+
Sbjct: 199 ---DLNFSIVDEVDSILIDEARTPLIISGEADKPTELYYRVAQIIPRLKPEEDYNLNEKD 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L +L+D+ + V LKA ++ D Y+V++G+ +I+
Sbjct: 256 KVVTLTEKGVSRVETMLGIENLYDDVHTELTHHVNQGLKAHALFKLDRDYVVKDGQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL+GMTGTA T
Sbjct: 316 DEFTGRLMFGRRYSEGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYDKLAGMTGTALT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+ +PTN P R D+P + T +GK+E E+ G+P+LVG+
Sbjct: 376 EEPEFKKIYKLDVVVIPTNKPARREDIPDVVYRTEKGKFEAVVDEIVERHAKGQPILVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SV+ SE LS LL+++G+PH VLNA KY REAE VA AG++ +TI+TNMAGRGTDII
Sbjct: 436 VSVDKSERLSALLERRGVPHQVLNA--KYHEREAEIVAGAGQRDMVTIATNMAGRGTDII 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F +
Sbjct: 495 GEGVSELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFISLEDDLMRLFGAENIM 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ D+ +PI I R + Q E F IRK+++++D+V+ QR+ +Y
Sbjct: 555 GI--MDKLGMDDSIPITSKMITRSIETAQHRVENRNFEIRKNVLDYDDVMNQQREIIYAQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFI 698
R+ +L G E+ + I +Y++ VV++ + +P W LD + E+I
Sbjct: 613 RRMVLMG--ENLRENIMEYIKKVVNDTVDIFSRESSYPEEWELDSFV-EYI 660
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E+ + M+E+ERAV+++ +D W DHL M+++ + +R++G +NPL EYK +
Sbjct: 698 RENAFGSELMREIERAVMLQVVDGKWMDHLDAMDQMREGIGLRAYGQKNPLVEYKHEAYD 757
Query: 858 FFISMLSATRRLTVESLVQY 877
F M+ + E +V+Y
Sbjct: 758 MFQGMIDSIE----EDIVRY 773
>gi|294629674|ref|ZP_06708234.1| preprotein translocase, SecA subunit [Streptomyces sp. e14]
gi|292833007|gb|EFF91356.1| preprotein translocase, SecA subunit [Streptomyces sp. e14]
Length = 938
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 289/450 (64%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT +VTVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGDGVHIVTVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHRFLGLSVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLKKGEAGNPLKGV 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYDVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P IR D + T K+E ++
Sbjct: 377 NKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNKPMIRKDQSDLIYRTEIAKFEAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K+ REA+ VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KHHEREAQIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP+ LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPEDLAEAELRQRGL 524
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EV++LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAEAAVKAEKEEVEKLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVETQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +Q+ +M +D + P W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLHEQVQHFMDDTIDAYVAAET-AEGFPEDWDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WGAF 716
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFSAMMDGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|349687696|ref|ZP_08898838.1| preprotein translocase subunit SecA [Gluconacetobacter oboediens
174Bp2]
Length = 913
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/438 (51%), Positives = 282/438 (64%), Gaps = 39/438 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLLATLAVYLSALAGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M ++ FLGLSVG++ M +ERR+ YR DITY N+E GFDYLRDN+ E +V
Sbjct: 141 DQMGALYNFLGLSVGVVVPNMPEDERRAAYRADITYGTNNEFGFDYLRDNMKYRVEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA--SKDVARYPVAAKVAELLVQGLHYTVE 155
R PFH AIVDEVDS+LIDE R PL+ISG A S D+ R VA L+ Y +
Sbjct: 201 R---PFHHAIVDEVDSILIDEARTPLIISGPAEDSSDLYRAVDEVMVA-LVADPETYEKD 256
Query: 156 LKNNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYI 208
K SV LTE+G E L T L+D N V +L+A + RDV YI
Sbjct: 257 EKFRSVILTEKGAEQVEDLLRTAGVLHEGGLYDSHNVAVIHHVQQSLRAHTLFTRDVDYI 316
Query: 209 VRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 268
VR GK +II+E TGR+ E RR+S+G+HQA+EAKE +++Q ++ +A IT+Q+ F++YP+L
Sbjct: 317 VRGGKVIIIDEFTGRMMEGRRYSDGLHQALEAKEHVEVQQENQTLASITFQNYFRMYPRL 376
Query: 269 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 328
SGMTGTA TE EF ++++ VIE+PTNLP R D + + TAR K+E ++ + R
Sbjct: 377 SGMTGTAMTEADEFADIYKLDVIEIPTNLPVARKDDDDEVYLTAREKYEAVASLIQEISR 436
Query: 329 L-GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIST 387
G+PVLVG+TS+E SEYLS LL+Q GI HNVLNAR + EAE VAQAG AITI+T
Sbjct: 437 TSGQPVLVGTTSIEKSEYLSSLLRQHGIRHNVLNAR--FHELEAEIVAQAGAPGAITIAT 494
Query: 388 NMAGRGTDIILGGNPKML 405
NMAGRGTDI LGGN ML
Sbjct: 495 NMAGRGTDIKLGGNVDML 512
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 4/169 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V++ GGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F D +
Sbjct: 544 VRKAGGLYVIGTERHESRRIDNQLRGRAGRQGDPGNSRFFISLEDDLMRIFGTDRMG--N 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ E I I + L Q E F +RK+ +++D+V+ QRK VY R+
Sbjct: 602 MLQKLGLKEGEAIVHPWINKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVYAQRRE 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIA 699
+ GA E S I + + V+ +++ + P W D+L ++ A
Sbjct: 662 YM-GA-EDVSPIITEMREDVIHDMVARCIPEKSFPEQWLKDELAQDVQA 708
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VE+ VL+ T D W++HL+ +++L + +R++G ++PL E+K + F +ML
Sbjct: 754 MRYVEKQVLLTTFDAVWKEHLLALDQLRQGIGLRAYGQKDPLNEFKHEAFELFHAMLDLL 813
Query: 867 RRLTVESLVQYWSSP 881
R ++ + +P
Sbjct: 814 RVRVTSTMARVEMAP 828
>gi|357589343|ref|ZP_09128009.1| preprotein translocase subunit SecA [Corynebacterium nuruki S6-4]
Length = 865
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/429 (47%), Positives = 278/429 (64%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G +AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYKVQIMGGAALHWGYVAEMKTGEGKTLTCVLPAYLNALSGDGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I G P ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHRFLGLDTDVILSGKKPAERRDAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++A+VDEVDS+LIDE R PL+ISG + A++ + +HY V+ K
Sbjct: 200 ---GHNYAVVDEVDSILIDEARTPLIISGPVGGSSQWFTAFARIVPKMTLDIHYEVDPKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NA+KAKE + RD YIVRNG+ LI+
Sbjct: 257 KTIGVKEEGVEFVEDQLGIDNLYSPEHSQLVSYLNNAIKAKELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DEFTGRILEGRRYNEGMHQAIEAKENVEIKNENQTLATVTLQNYFRLYDKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V +PTN PN RVD + T K++ ++ G+PVLVG+
Sbjct: 377 EAAELKQIYKLDVAPIPTNKPNQRVDDIDLVYKTQEAKFDAVADDIAERVEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL + I HNVLNA K+ +EAE VAQAGR A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLSARHIRHNVLNA--KFHEKEAEIVAQAGRLKAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLA 406
LGGNP ++
Sbjct: 495 LGGNPDIIC 503
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 168/367 (45%), Gaps = 73/367 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
++ E +V +GGL+V+GT HESRRIDNQLRGR RQGDPG TRF +S++D
Sbjct: 528 AIEKARAKSDEEAKKVCEVGGLYVLGTERHESRRIDNQLRGRCARQGDPGETRFYLSMRD 587
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ +F ++++R+ +DMPI+ + + G Q E F +RK+++++DE
Sbjct: 588 ELMTRFVGQA--MENMMTRLNVPDDMPIDSKMVTNAIKGAQSQVENSNFEMRKNVLKYDE 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QRK +Y R+ IL G N + + +++++D+ I VD Y W L
Sbjct: 646 VLNEQRKVIYGERRQILEGEN------VAENVRSMMDDTIAAYVDGATAEGYVEDWDL-- 697
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEEL--PELNS---IDINNFYFPDLPKPPNLF 747
D L K++E L P +N+ ID + + P L
Sbjct: 698 ----------------------DELWKALEALYTPGVNARELIDGSEYGKPGELSAGQLL 735
Query: 748 RGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
+++ + N +Y D L + V E + M
Sbjct: 736 DALQKDA----------------NAQY------------DELEEAVAAVGGEEQ-----M 762
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M +
Sbjct: 763 RGMERGVLLNVVDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGGDMFRRMNDGIK 822
Query: 868 RLTVESL 874
TV L
Sbjct: 823 EETVRQL 829
>gi|358445597|ref|ZP_09156195.1| preprotein translocase subunit SecA [Corynebacterium casei UCMA
3821]
gi|356608465|emb|CCE54463.1| preprotein translocase subunit SecA [Corynebacterium casei UCMA
3821]
Length = 848
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/479 (44%), Positives = 300/479 (62%), Gaps = 34/479 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYKVQIMGGAALHFGNVAEMRTGEGKTLTSLLAAYLNALDGKGVHIVTVNDYLARRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGLSVG+I M P R+ Y CDITY N+ELGFDYLRDN+ N + V R
Sbjct: 140 MMGRVHRWLGLSVGVILNDMRPPARKEAYACDITYGTNNELGFDYLRDNMVRNLKDCVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++ IVDEVDS+LIDE R PL+ISG Y V A +A + +G+HY V++K
Sbjct: 200 G---HNYCIVDEVDSILIDEARTPLIISGPVDGSSQFYGVFATLAPRMREGIHYEVDIKK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 257 RTVGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNALKAKELFTRDKDYIVRDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGR+ RR++EG+HQA+EAKEG++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DGFTGRILAGRRYNEGMHQAIEAKEGVEIKNENQTLATVTLQNYFRLYGKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++++ V+ +PTN PN R D + + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNSIYELDVVPIPTNRPNQRADHSDRIYKTQEAKFAAVVDDIAEHVEQGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ H+VLNA KY E +A+AGR +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLDKRGVKHSVLNA--KYHEEEGNIIARAGRPGNVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
LGGNP+++ + +R L +EA + E++D+ K L + S L +L
Sbjct: 495 LGGNPEVILDMKLRERGLDPFDDEEKYQEAWDAEIEDERERSKRLGDEVRESGGLYVLG 553
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 170/361 (47%), Gaps = 85/361 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++DE+ +F +
Sbjct: 540 GDEVRESGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMRDELMVRFVGQS-- 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PI+ + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 598 MENMMNRLNVPDDVPIDSKMVSNSVKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYAT 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+SIL ++ I N+ + I D
Sbjct: 658 RRSILDSSD------------------IKDNIRTM---------------------IADT 678
Query: 708 LFAGISGDTLLKSIE--ELPEL-NSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAIC 764
+ A +SG T +E +L +L N++D+ Y P I
Sbjct: 679 VTAYVSGATTTGYVEDWDLDQLWNALDV--LYGP-----------------------TID 713
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-----------YMKEVERA 813
+ +L Y A L + L D L+ L ++YDD+ M++ ER
Sbjct: 714 AQELVDGSEYGAPGELTAEQLTDALVNDAL-----AQYDDLEAKISEIGGEKQMRDTERM 768
Query: 814 VLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVES 873
+++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M + TV
Sbjct: 769 IILPVIDSKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMNEGVKEETVRQ 828
Query: 874 L 874
L
Sbjct: 829 L 829
>gi|120603199|ref|YP_967599.1| preprotein translocase subunit SecA [Desulfovibrio vulgaris DP4]
gi|166918836|sp|A1VFF6.1|SECA_DESVV RecName: Full=Protein translocase subunit SecA
gi|120563428|gb|ABM29172.1| protein translocase subunit secA [Desulfovibrio vulgaris DP4]
Length = 833
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 280/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLVGGMALHHGKIAEMKTGEGKTLVATLPVVLNALTGKGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG+I G+ E+R++ Y DITY N+E GFDYLRDN+ +EQLV
Sbjct: 141 AWMGQLYNFLGLSVGVIVHGLDDEQRKAAYGADITYGTNNEFGFDYLRDNMKFYAEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG + + Y ++ L + H+TV+ K
Sbjct: 201 RG---HNFAIVDEVDSILIDEARTPLIISGASEESTGLYRHMDEIVRKLTRDTHFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ LT+EG+A E + ++L+D N +M ALKA +RRDV YIV+ G+ +I
Sbjct: 258 ARTAMLTDEGVAFCETLVGIDNLYDPGNITTQHHLMQALKAHNLFRRDVDYIVKEGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE +KI+A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEAVKIEAENQTLASITFQNYFRMYAKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V+ +PTN P R D + T R K++ Q + + + G+PVLVG
Sbjct: 378 TEAVEFHQIYSLEVVSIPTNKPMQRKDFADAIYRTKREKYDAIAQAIAELHKAGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK+ G+PH+VLNA K+ +EAE VA AG++ +TI+TNMAGRGTDI
Sbjct: 438 TISIETSELLSTMLKKTGVPHSVLNA--KHHEKEAEIVALAGQRGHVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F +
Sbjct: 498 GEGVRELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRLFG--SER 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ +E PIE + R + Q E + F IRK+L+++D V+ QR+ +Y L
Sbjct: 556 ISGLMEKLGMEEGEPIEARMVSRAIENAQKRVEGHNFEIRKTLLDYDNVMNQQREVIYTL 615
Query: 648 RQSILTGANESCSQQIF 664
R+ ++ + + + F
Sbjct: 616 RRDAMSAPDLGPTMEEF 632
>gi|302566097|pdb|3IQM|A Chain A, Active Site Mutants Of B. Subtilis Seca
Length = 802
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++D+VDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDQVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|259506532|ref|ZP_05749434.1| preprotein translocase, SecA subunit [Corynebacterium efficiens
YS-314]
gi|259165952|gb|EEW50506.1| preprotein translocase, SecA subunit [Corynebacterium efficiens
YS-314]
Length = 839
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 74 KHYKVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 133
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGLSVG+I + P ER+ Y CDITY N+ELGFDYLRDN+A + LV R
Sbjct: 134 WMGRVHRWLGLSVGVILSELRPAERKVAYDCDITYGTNNELGFDYLRDNMARSLNDLVQR 193
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +HY V+ +
Sbjct: 194 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYNVFAQIVPQLTRDIHYEVDHRK 250
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 251 KTVGIKEEGVEKVEDLLGIENLYAPEHSQLVSYLNNAIKAEELFERDKDYIVRNGEVMIV 310
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KLSGMTGTA+T
Sbjct: 311 DGFTGRVLAGRRYNEGMHQAIEAKEKVEIKNENQTLATVTLQNYFRLYEKLSGMTGTAET 370
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI++PTN N R DL + T K+ ++ G+PVLVG+
Sbjct: 371 EAAELHQIYKLDVIQIPTNRENQRDDLTDLVYKTQEAKFAAVVDDIAERIANGQPVLVGT 430
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 431 VSVERSEYLSQLLTRRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 488
Query: 398 LGGNPKML 405
LGGNP +L
Sbjct: 489 LGGNPDIL 496
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C +V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F
Sbjct: 530 CEERAEKVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGATRFYLSMRDDLMVRFVG 589
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 590 PT--MENMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 647
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAI 700
+Y R+ IL S I Y++ +VDE I V Y W LDKL A+
Sbjct: 648 IYSERREILE------SSDISHYIKNMVDETISAYVAAATANGYVEDWDLDKLWNALEAL 701
Query: 701 AG 702
G
Sbjct: 702 YG 703
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M A
Sbjct: 756 MRNIERMVLMPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKEAI 815
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 816 KEETVRQL 823
>gi|398308473|ref|ZP_10511947.1| preprotein translocase subunit SecA [Bacillus mojavensis RO-H-1]
Length = 841
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 279/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALSGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D +N + +LKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKNVALNHHINQSLKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNQPVVRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R ++ +E+ + + +++ ++ I + P W LD L++
Sbjct: 614 RFEVID--SENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVE 659
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E ++ + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEEKFGEEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F M+ +
Sbjct: 759 MFEHMIES 766
>gi|46579238|ref|YP_010046.1| preprotein translocase subunit SecA [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152623|ref|YP_005701559.1| Preprotein translocase subunit SecA [Desulfovibrio vulgaris RCH1]
gi|81830483|sp|Q72DV4.1|SECA_DESVH RecName: Full=Protein translocase subunit SecA
gi|46448652|gb|AAS95305.1| preprotein translocase, SecA subunit [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233067|gb|ADP85921.1| preprotein translocase, SecA subunit [Desulfovibrio vulgaris RCH1]
Length = 833
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 280/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLVGGMALHHGKIAEMKTGEGKTLVATLPVVLNALTGKGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG+I G+ E+R++ Y DITY N+E GFDYLRDN+ +EQLV
Sbjct: 141 AWMGQLYNFLGLSVGVIVHGLDDEQRKAAYGADITYGTNNEFGFDYLRDNMKFYAEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG + + Y ++ L + H+TV+ K
Sbjct: 201 RG---HNFAIVDEVDSILIDEARTPLIISGASEESTGLYRHMDEIVRKLTRDTHFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ LT+EG+A E + ++L+D N +M ALKA +RRDV YIV+ G+ +I
Sbjct: 258 ARTAMLTDEGVAFCEKLVGIDNLYDPGNITTQHHLMQALKAHNLFRRDVDYIVKEGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE +KI+A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEAVKIEAENQTLASITFQNYFRMYAKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V+ +PTN P R D + T R K++ Q + + + G+PVLVG
Sbjct: 378 TEAVEFHQIYSLEVVSIPTNKPMQRKDFADAIYRTKREKYDAIAQAIAELHKAGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK+ G+PH+VLNA K+ +EAE VA AG++ +TI+TNMAGRGTDI
Sbjct: 438 TISIETSELLSTMLKKTGVPHSVLNA--KHHEKEAEIVALAGQRGHVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F +
Sbjct: 498 GEGVRELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRLFG--SER 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ +E PIE + R + Q E + F IRK+L+++D V+ QR+ +Y L
Sbjct: 556 ISGLMEKLGMEEGEPIEARMVSRAIENAQKRVEGHNFEIRKTLLDYDNVMNQQREVIYTL 615
Query: 648 RQSILTGANESCSQQIF 664
R+ ++ + + + F
Sbjct: 616 RRDAMSAPDLGPTMEEF 632
>gi|442322847|ref|YP_007362868.1| preprotein translocase subunit SecA [Myxococcus stipitatus DSM
14675]
gi|441490489|gb|AGC47184.1| preprotein translocase subunit SecA [Myxococcus stipitatus DSM
14675]
Length = 950
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/433 (46%), Positives = 283/433 (65%), Gaps = 29/433 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQLIGGMFLHEGCIAEMRTGEGKTLTATLPCYLNALSGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV++F+G++ G + + ++R+ YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 WMGRVYKFMGMTTGCVLHELSDKQRQEAYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG +Y +V LV +T++ K+
Sbjct: 202 ---ELNYAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGLVPDQDFTLDEKH 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L ++L+D + V AL+A Y+RD Y+V++G+ +II
Sbjct: 259 RSVSLTDDGIEKLQKRLSVSNLYDPGEIETLHHVEQALRAHTLYKRDKDYVVKDGEVVII 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQA+EAKEG+KI+ ++ +A I++Q+ F++Y KLSGMTGTA T
Sbjct: 319 DEFTGRSMPGRRWSDGLHQAIEAKEGVKIENENQTLATISFQNYFRMYSKLSGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN P IR D + T R K+E ++E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLDVRVIPTNRPPIRKDQQDVVYKTEREKFEAVAAQIEELHKAGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE +S LK++G+PHNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVSSFLKKRGVPHNVLNA--KQHQREADIVAQAGRKGAVTISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAKKII 410
LGGN ++LAK +
Sbjct: 497 LGGNAEVLAKAAV 509
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
E +EV GGL +IGT HESRR+DNQLRGRAGRQGDPG++RF +SL+D++ + F
Sbjct: 561 TKKERTEVMEAGGLFIIGTERHESRRVDNQLRGRAGRQGDPGASRFFLSLEDDLMRIFGS 620
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ L+ R+ +E IE + R + Q E + F IRK+L+E+D+V+ QR+
Sbjct: 621 ERIQG--LMERLGMEEGEVIEHIWLTRAIESAQKRVEGHNFDIRKNLLEYDDVMNQQRRT 678
Query: 644 VYDLRQSILTGA 655
+Y LR+ +L
Sbjct: 679 IYKLRRQVLAAG 690
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
T+D W++HL+ M+ L + +R +G ++P +EYK +G + FI LSA + V L++
Sbjct: 809 TIDRLWKEHLLGMDHLRQGIGLRGYGQKDPKQEYKREGYQGFIQTLSAIKAQFVSQLMRV 868
Query: 878 WSSPMESQE 886
S E
Sbjct: 869 QPRSATSAE 877
>gi|25027330|ref|NP_737384.1| preprotein translocase subunit SecA [Corynebacterium efficiens
YS-314]
gi|81749990|sp|Q8FRI7.1|SECA1_COREF RecName: Full=Protein translocase subunit SecA 1
gi|23492611|dbj|BAC17584.1| putative preprotein translocase SecA [Corynebacterium efficiens
YS-314]
Length = 845
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYKVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGLSVG+I + P ER+ Y CDITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 WMGRVHRWLGLSVGVILSELRPAERKVAYDCDITYGTNNELGFDYLRDNMARSLNDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +HY V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYNVFAQIVPQLTRDIHYEVDHRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 KTVGIKEEGVEKVEDLLGIENLYAPEHSQLVSYLNNAIKAEELFERDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KLSGMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKEKVEIKNENQTLATVTLQNYFRLYEKLSGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI++PTN N R DL + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELHQIYKLDVIQIPTNRENQRDDLTDLVYKTQEAKFAAVVDDIAERIANGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 VSVERSEYLSQLLTRRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP +L
Sbjct: 495 LGGNPDIL 502
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C +V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++D++ +F
Sbjct: 536 CEERAEKVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGATRFYLSMRDDLMVRFVG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 596 PT--MENMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAI 700
+Y R+ IL S I Y++ +VDE I V Y W LDKL A+
Sbjct: 654 IYSERREILE------SSDISHYIKNMVDETISAYVAAATANGYVEDWDLDKLWNALEAL 707
Query: 701 AG 702
G
Sbjct: 708 YG 709
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M A
Sbjct: 762 MRNIERMVLMPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKEAI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|389866280|ref|YP_006368521.1| protein translocase subunit secA [Modestobacter marinus]
gi|388488484|emb|CCH90061.1| Protein translocase subunit secA [Modestobacter marinus]
Length = 1021
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 278/433 (64%), Gaps = 29/433 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+ VQ++GGA LH G+IAEMKT VVT NDYLAQRDAE
Sbjct: 79 RHYRVQLMGGAALHLGNIAEMKTGEGKTLTGVLPAYLNALSGDGVHVVTTNDYLAQRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV RFLGLS+G I G P++RR Y DIT+ N+E GFDYLRDN+A + LV R
Sbjct: 139 WMGRVQRFLGLSIGTIVSGQRPDQRREQYLADITHGTNNEFGFDYLRDNMAWSKADLVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + HY VE
Sbjct: 199 G---HPFAIVDEVDSILIDEARTPLIISGPAESSARWYGEFARIAPLMKRDRHYEVEEAK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TEEG+ E L +L++ N P ++ NALKAKE +++D QYIV NG+ LI+
Sbjct: 256 RTVAITEEGVEFVEDQLGIENLYEAANTPLISYLNNALKAKELFKKDQQYIVTNGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KLSGMTGTA+T
Sbjct: 316 DEFTGRVLAGRRYNEGMHQAIEAKEKVEIKDENQTLATITLQNYFRLYEKLSGMTGTAQT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + +++ V+ +PTN P +R D + T + K++ ++ G+PVLVG+
Sbjct: 376 EAAELSQTYKLGVVPIPTNRPMVREDRADVIYKTEKAKFDAVVDDIAERHEAGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE L+ L ++GIPH VLNA K AREA +A AGR +T++TNMAGRGTDI
Sbjct: 436 ASVEKSEVLAKYLLKRGIPHEVLNA--KNHAREASIIAMAGRLGGVTVATNMAGRGTDIQ 493
Query: 398 LGGNPKMLAKKII 410
LGGN + +A + +
Sbjct: 494 LGGNAEFIADETL 506
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L + E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 527 ALATAKAQVKAEHDQVTEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 586
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ ++F+ ++ R+ +D+ PIE + R + Q E+ F +RK ++++DE
Sbjct: 587 DLMRRFNGPMLESMMTTLRVPDDQ--PIESKMVSRAIRSAQTQVEQQNFEVRKDVLKYDE 644
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QR +YD R+ +L G + + ++A+VD+++ V+ Y W L+
Sbjct: 645 VLNRQRTVIYDERRKVLDG------EDLHVQVRAMVDDVVAAYVNGATETGYAEDWDLEL 698
Query: 693 L 693
L
Sbjct: 699 L 699
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL+ LD WR+HL M+ L + +++R+ +R+P+ EY+ +G F +ML
Sbjct: 757 MRELERRVLLSVLDRKWREHLYEMDYLRAGIHLRAMANRDPVVEYQREGYDMFNAMLDGI 816
Query: 867 RRLTV 871
+ +V
Sbjct: 817 KEESV 821
>gi|336320258|ref|YP_004600226.1| preprotein translocase, SecA subunit [[Cellvibrio] gilvus ATCC
13127]
gi|336103839|gb|AEI11658.1| preprotein translocase, SecA subunit [[Cellvibrio] gilvus ATCC
13127]
Length = 922
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 287/439 (65%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+ +E
Sbjct: 81 RHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALSGKGVHVVTVNDYLAEYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLGL+ G I P ERR Y DITY N+E GFDYLRDN+A ++++LV R
Sbjct: 141 LMGRVYRFLGLTTGCILSSQTPAERREQYAADITYGTNNEFGFDYLRDNMAWSTDELVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG AS D R Y AKV L Y V+ K
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGPASGDANRWYGEFAKVVRRLQAERDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GIA E L ++L++ N P F+ NA++AKE ++RD Y+V NG+ LI
Sbjct: 258 KRTVGVLEPGIARVEDYLGIDNLYESLNTPLIGFLNNAIRAKELFKRDKDYVVMNGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ I+A++ +A IT Q+ F+LY +LSGMTGTA+
Sbjct: 318 VDEHTGRILPGRRYNEGMHQAIEAKEGVAIKAENQTLATITLQNYFRLYSRLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN R+D + + GK++ +++ G+PVLVG
Sbjct: 378 TEAAEFQGTYELGVVPIPTNRNMQRIDQKDLVYKSEAGKFDAVVEDIVERHAKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS L++QG+PH VLNA K AREA VAQAGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSELLSAKLRKQGVPHEVLNA--KQHAREASIVAQAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + +A + +R L
Sbjct: 496 MLGGNAEFMAVADLAERGL 514
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ + E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQ
Sbjct: 529 AALEKAREAVAAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQ 588
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F++ A +++R ED+P+E + R + Q E F IRK+++++D
Sbjct: 589 DDLMR--LFNSGMAESMMTRAGFPEDLPLESKIVTRGIQSAQSQVEARNFEIRKNVLKYD 646
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ QR+ +Y+ R+ +L G E +Q+ + V+ + G + P W L+ L
Sbjct: 647 DVMSRQREVIYEQRRRVLEG--EDLHEQVAHFRTDVLTAYVQGATTEGR-PEDWDLEALW 703
Query: 695 KEFIAI 700
A+
Sbjct: 704 TALRAV 709
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
LLR+ L D +A +ES M+++ER V + LD WR+HL M+ L + +
Sbjct: 734 LLRELLSDAEVAY---AERESTIGSANMRQLERRVTLSVLDRKWREHLYEMDYLKEGIGL 790
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R+ R+PL EY+ +G + F +M A + TV
Sbjct: 791 RAMAQRDPLVEYQREGYQLFNAMTDAIKEETV 822
>gi|317508041|ref|ZP_07965729.1| preprotein translocase, partial [Segniliparus rugosus ATCC BAA-974]
gi|316253667|gb|EFV13049.1| preprotein translocase [Segniliparus rugosus ATCC BAA-974]
Length = 919
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 285/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVT NDYLA+RD+E
Sbjct: 93 RHFDVQVMGGAALHYGNIAEMKTGEGKTLTCVLPAYLNALTGEGVHVVTTNDYLAKRDSE 152
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLSVG I G RR Y DITY N+E GFDYLRDN+A N LV R
Sbjct: 153 WMGRVHRFLGLSVGAILAGGGSARRREAYHADITYGTNNEFGFDYLRDNMAHNVNDLVQR 212
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++AE + + +HY V+L+
Sbjct: 213 G---HSFAIVDEVDSILIDEARTPLIISGPADSSSKWYVEFARIAERMQKDVHYEVDLRK 269
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ ++E G+ E L +L++ N ++ NA+KAKE + RD Y+V+NG+ LI+
Sbjct: 270 RTIGVSEAGVGFVEDQLGIGNLYEAANSALVSYLNNAVKAKELFTRDKDYLVQNGEVLIV 329
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++++A++ A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 330 DEHTGRLLVGRRYNEGLHQAIEAKENVEVKAENQTFATITLQNYFRLYDKLAGMTGTART 389
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN IR D + T K++ ++V G+PVL+G+
Sbjct: 390 EASEFQQIYKLGVVSIPTNRSMIRTDQADLIYRTQEAKFDAVVKDVAERHEKGQPVLIGT 449
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE LS LLK+ +PH VLNA KY +EA +A+AG+ A+T++TNMAGRGTDI+
Sbjct: 450 TSVERSETLSRLLKKSKVPHTVLNA--KYHEQEAAIIARAGQLGAVTVATNMAGRGTDIV 507
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + + ++ L
Sbjct: 508 LGGNVDVIADQRLREQGL 525
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 164/362 (45%), Gaps = 67/362 (18%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L + + + +V+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL
Sbjct: 540 STLTEVKEEAEKQAEKVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLG 599
Query: 575 DEMFQKFSFDTSWAVDLISRITND-EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
DE+ ++F+ ++ R +D+P+E + R + Q E+ F RK+++++
Sbjct: 600 DELMRRFN---QGILEFALRSGGQPDDVPLEHKLVTRAIKTAQTDIEQMNFESRKNVLKY 656
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
D+V+ QRK +Y R+ IL G E Q+ Q ++ + I V+ Y W L
Sbjct: 657 DDVMNEQRKVIYAERRRILEG--EDLGDQV----QHMITDTITAYVNGATAEGYAEDWDL 710
Query: 691 DKLLKEFIAIAGKILDDLF-AGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRG 749
L L L+ GI+ + + P RG
Sbjct: 711 GALW--------AALRTLYPVGITQEQAV-------------------------PTDKRG 737
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
R+ S+ + + D Y+ T + +G+ +A +
Sbjct: 738 QRKDVSAEELLELLLED---ARAHYKKRTEEINSVVGEDGMA-----------------Q 777
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ER ++++ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML +
Sbjct: 778 LERMIMLQVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFTGMLDGLKEE 837
Query: 870 TV 871
V
Sbjct: 838 VV 839
>gi|404330085|ref|ZP_10970533.1| preprotein translocase subunit SecA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 841
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 276/420 (65%), Gaps = 29/420 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQI+G LH+G++AEMKT ++TVNDYLA RDA +
Sbjct: 83 FYVQIVGAIALHEGNVAEMKTGEGKTLVATMPLYLNALEGKGVHLITVNDYLASRDANAL 142
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLG+SVGL GM PEE+++ Y DITY NSE GFDYLRDN+ E++V R
Sbjct: 143 GPLYNFLGMSVGLNSNGMSPEEKKTAYGADITYGTNSEFGFDYLRDNMVLYKEEMVQR-- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FAIVDEVDS+LIDE R PL+ISG A K Y A + A LL + Y V+LK +
Sbjct: 201 -PLNFAIVDEVDSILIDEARTPLIISGNAEKSTDLYVRANQFARLLTEKQDYKVDLKTKT 259
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG++ AE +L+D N V ALKA RD Y+V++G+ +I++
Sbjct: 260 VQLTEEGMSKAEKFFHIKNLYDYSNVLLNHHVSEALKAHAIMHRDTDYVVQDGQIVIVDP 319
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ++S +A IT Q+ F++Y KLSGMTGTAKTEE
Sbjct: 320 FTGRLMQGRRYSEGLHQAIEAKEGLEIQSESKTLATITLQNFFRMYQKLSGMTGTAKTEE 379
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M VI +PTN P IR D P + T GK++ +E+ ++ G+PVLVG+ +
Sbjct: 380 EEFQSIYNMDVIVIPTNKPMIRDDHPDLIYKTKEGKFKAVVEEIVKLYHRGQPVLVGTVA 439
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK++GIPHNVLNA K A EAE + AG+ ++TI+TNMAGRGTDI LG
Sbjct: 440 VETSELISKLLKRRGIPHNVLNA--KNHASEAEIIMNAGQVGSVTIATNMAGRGTDIKLG 497
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ ++F D
Sbjct: 497 GEGVVELGGLFILGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRRFGSDKMK 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ +D PIE + R + Q E F RK L++FD+V+ QR+ +Y
Sbjct: 557 G--MMERLGMHDDQPIESKIVSRSVEAAQRRVEGNNFDARKQLLKFDDVMRQQREIIYKE 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R ++ N I + V++ +I + + P W L ++
Sbjct: 615 RMEVMEAKN--VRPDIEDMIHTVIENLIKSHTPDNEVPEEWDLSSVI 659
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E R+ M+E ER +L++T+D W DH+ M +L + +R++G +P Y+I+G +
Sbjct: 700 KEERFTPERMREFERVILLRTVDTKWMDHIDAMEQLREGIYLRAYGQVDPYRAYQIEGHK 759
Query: 858 FFISMLSA 865
F M+ A
Sbjct: 760 MFEEMIGA 767
>gi|405354505|ref|ZP_11023866.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Chondromyces apiculatus DSM 436]
gi|397092220|gb|EJJ22994.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 942
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 282/430 (65%), Gaps = 29/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQLIGGMFLHEGCIAEMRTGEGKTLTATLPTYLNALSGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+RFLG++ G + + ++R+ +YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 WMGRVYRFLGMTTGCVLHELNDKQRQESYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG +Y +V LV YT++ K+
Sbjct: 202 ---ELNFAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGLVPDQDYTLDEKH 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L +L+D + V AL+A Y+RD Y+V++G+ +I+
Sbjct: 259 RSVSLTDDGIEKLQKRLGVGNLYDPGEIETLHHVDQALRAHTLYKRDKDYVVKDGEVVIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR RRWS+G+HQA+EAKEG+KI+ ++ +A +++Q+ F++Y KL+GMTGTA T
Sbjct: 319 DEFTGRQMPGRRWSDGLHQAIEAKEGVKIENENQTLATVSFQNYFRMYSKLAGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN IR DL + T R K+E E+E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLDVRVIPTNRAPIRKDLQDVVYKTEREKFEAVAAEIEQLHKNGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE ++ LK++GIPHNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVASFLKKRGIPHNVLNA--KQHQREADIVAQAGRKGAVTISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAK 407
LGGN ++LAK
Sbjct: 497 LGGNAEVLAK 506
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V GGL +IGT HESRR+DNQLRGRAGRQGDPG +RF +SL+D++ + F +
Sbjct: 559 VHNAGGLFIIGTERHESRRVDNQLRGRAGRQGDPGGSRFFLSLEDDLMRIFGSERIQG-- 616
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
L+ R+ +E IE + R + G Q E + F IRK+L+E+D+V+ QR+ +Y LR+
Sbjct: 617 LMERLGMEEGEVIEHVWLSRAIEGAQKRVEGHNFDIRKNLLEYDDVMNQQRRTIYKLRRQ 676
Query: 651 IL 652
+L
Sbjct: 677 VL 678
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+E + + +M+ ++ L T+D W+DHL+ M+ L + +R +G ++P +EYK +G
Sbjct: 780 AREEEFGENFMRFLQYNYLA-TIDRLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEGY 838
Query: 857 RFFISMLSATRRLTVESLVQ 876
+ FI MLSA + V L+
Sbjct: 839 QGFIQMLSAIKSQFVTQLMH 858
>gi|401565625|ref|ZP_10806455.1| SecA cross-linking domain protein [Selenomonas sp. FOBRC6]
gi|400186720|gb|EJO20927.1| SecA cross-linking domain protein [Selenomonas sp. FOBRC6]
Length = 880
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALAGKGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSEGQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 203 R---PLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+VR+ + +I
Sbjct: 260 AKTVAPADSAVPKIEKIVGITNLYAPENIELSHCFTAALRAKALMHRDRDYVVRDDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYEKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++ +PVI +PTN P RVD + T K+ + V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYNLPVIVIPTNKPIQRVDEADVIYKTKAAKYRAVGRAVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSNVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEALGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDRLGMEEDEPIEHAIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 618 RKKILLG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPQGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
+ ++ D + + +E++ E
Sbjct: 676 KKEELEKLARDEIQEELEKVAE 697
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
M+E+E+ V+++ +D W DHL +M+ L +N+R++G RNPL EYKI+ F M
Sbjct: 712 MRELEKVVMLRVVDQKWMDHLDHMDMLREGINLRAYGQRNPLVEYKIEALTMFEEM 767
>gi|197121188|ref|YP_002133139.1| preprotein translocase subunit SecA [Anaeromyxobacter sp. K]
gi|196171037|gb|ACG72010.1| preprotein translocase, SecA subunit [Anaeromyxobacter sp. K]
Length = 962
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/431 (48%), Positives = 279/431 (64%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 99 MRHFDVQLIGGAVLHSGKIAEMKTGEGKTLVATLPCVLNALSGRGVHVVTVNDYLARRDA 158
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RF GL G+I G+ ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 159 EWMGRLYRFCGLRTGVIVHGLTDRERQEAYGSDITYGQNNEFGFDYLRDNMKFRLQDYVQ 218
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG + + Y V +++ +TV+ K
Sbjct: 219 ---GELNFAIVDEVDSILIDEARTPLIISGPSDESSELYARVNGVIPSMIRDQDFTVDEK 275
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ ++ +T+ G+ E L +L+ E V AL+A YR +V Y+V++G+ LI
Sbjct: 276 SRTIVMTDAGVEKMEKKLSVQNLYAPEEIETLHHVEQALRAHHIYRNEVDYVVKDGEVLI 335
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A I++Q+ F++Y KL+GMTGTA
Sbjct: 336 VDEFTGRLMPGRRWSDGLHQAVEAKEGVKIEAENQTLATISFQNYFRMYSKLAGMTGTAD 395
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K + + V+ +PTN N+R D + T K++ E+E G+PVLVG
Sbjct: 396 TEAEEFAKTYNIDVVVIPTNKKNVRKDSEDVVYKTEGEKFDALCTEIEQRHGTGQPVLVG 455
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SV SE +S LLK++G+PH VLNA K+ REAE VAQAGRK A+TISTNMAGRGTDI
Sbjct: 456 TVSVAKSEVVSTLLKRRGVPHAVLNA--KHHQREAEIVAQAGRKGAVTISTNMAGRGTDI 513
Query: 397 ILGGNPKMLAK 407
ILGGN +M+AK
Sbjct: 514 ILGGNAEMMAK 524
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ + + E EV +LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+ F +SL+
Sbjct: 556 AALEKLKAQTTAEHEEVVKLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSIFYLSLE 615
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ + F D L+ R+ + IE + + + G Q E + F IRK+L+E+D
Sbjct: 616 DELMRIFGSDRIQG--LMGRMGMKDGEQIEHPWLTKAIEGAQKKVEAHNFDIRKNLLEYD 673
Query: 635 EVLEVQRKHVYDLRQSIL 652
+V+ QR+ +Y LR+ +L
Sbjct: 674 DVMNQQRRSIYRLRRMVL 691
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
E+ + ++ +D W+DHL++M+ L + +R +G ++P +EYK +G F+ M
Sbjct: 816 EQYLYLQAIDQQWKDHLLSMDHLRQGIGLRGYGQKDPKQEYKKEGYEMFVQM 867
>gi|357633863|ref|ZP_09131741.1| preprotein translocase, SecA subunit [Desulfovibrio sp. FW1012B]
gi|357582417|gb|EHJ47750.1| preprotein translocase, SecA subunit [Desulfovibrio sp. FW1012B]
Length = 837
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 281/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGITLHQGKIAEMKTGEGKTLVATLPIVLNALSAKGVHLITVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG+I G+ ER++NYR DITY N+E GFDYLRDN+ EQLV
Sbjct: 141 AWMGKLYNFLGLSVGVIVHGLDDAERQANYRADITYGTNNEFGFDYLRDNMKFYKEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +F+IVDEVDS+LIDE R PL+ISG+A Y LL + +T++ K
Sbjct: 201 R---ELNFSIVDEVDSILIDEARTPLIISGQAEDSSTLYARIDAFIPLLRKEKDFTIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+G+A E L+ ++L+D N + V+ ALKA ++RDV Y+V++G+ LI
Sbjct: 258 ARTVLLTEDGVARMEDVLKIDNLYDAANITFQHHVLQALKAHHIFQRDVDYVVKDGQVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE ++++A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEHVEVEAENQTLATITFQNYFRMYKKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PT+ +R D P + T R K+E +V+ + G+PVLVG
Sbjct: 378 TEAVEFREIYDLEVISIPTHRAMVRKDFPDLVYKTQREKFEAIAHDVKELHEKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LL++ G+PH+VLNA K +EAE VAQAG +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELLSGLLQKTGVPHDVLNA--KNHEKEAEIVAQAGHSGRVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GPGVTDLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLMRLFGSDRLK 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ ++ PIE + R + Q E + F IRK L+E+D V+ QR+ +Y
Sbjct: 558 G--LMDKLGMEDGEPIENRMVSRAIENAQKRVEAHNFEIRKQLLEYDNVMNQQREVIYSR 615
Query: 648 RQSILTGANESCSQQIF--QYMQAVVDEII 675
R+ ++ E+ + + F Y++ +VDEI
Sbjct: 616 RRQLM----ETSTPETFALDYIEDIVDEIF 641
>gi|387138127|ref|YP_005694106.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387140145|ref|YP_005696123.1| preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389849873|ref|YP_006352108.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 258]
gi|349734605|gb|AEQ06083.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355391936|gb|AER68601.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 1/06-A]
gi|388247179|gb|AFK16170.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 258]
Length = 847
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/438 (46%), Positives = 290/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GG LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGVALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR+ Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLEVGVILANMQPTERRAAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 257 RTVGIKEEGVAYVEDQLGIENLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQRRGVKHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 11/176 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ +F +
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMVRFVGQS--ME 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y R+
Sbjct: 600 NMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSERR 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
IL A+ I + +Q ++D+ I VD Y W LD L ++ G
Sbjct: 660 EILESAD------IAENIQKMIDDTIGAYVDGATANGYVEDWDLDALWNALESLYG 709
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|312142852|ref|YP_003994298.1| Preprotein translocase subunit SecA [Halanaerobium
hydrogeniformans]
gi|311903503|gb|ADQ13944.1| preprotein translocase, SecA subunit [Halanaerobium
hydrogeniformans]
Length = 859
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/430 (48%), Positives = 284/430 (66%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
RH+DVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 82 FRHYDVQLIGGIVLHQGKIAEMKTGEGKTLAATLAVYLNALTEKGVHVVTVNDYLAERDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLG+SVG+I GM P ERR Y+CDITY N+E GFDYLRDN++ E LV
Sbjct: 142 EWMGQIYRFLGMSVGVILSGMSPAERREAYQCDITYGTNNEFGFDYLRDNMSYKEEDLVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+LIDE R PL+ISG + + Y +V L + HY ++ K
Sbjct: 202 R---EHHYAILDEVDSILIDEARTPLIISGPVQEKSSDYRKFNRVIPYLKKDEHYEMDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
N V LTEEG+ E L ++L+ E + +N ALKA ++D YIV++G I
Sbjct: 259 NKLVTLTEEGVKKVESKLNIDNLYSEENFKLNHQLNQALKAHTLMKKDRDYIVKDGMVKI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV E RR+SEG+HQA+EAKEG+++Q S A+IT Q+ F++Y KL+GMTGTA+
Sbjct: 319 VDEFTGRVMEGRRYSEGLHQAIEAKEGVEVQKGSQTFAKITLQNYFRMYDKLAGMTGTAE 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF+K++ MPV+ +PTN P +R ++P F + K+ +E++ ++ G+PVLVG
Sbjct: 379 TEEEEFIKIYDMPVVVIPTNKPLVRDNMPDLVFTSKEAKYNAVIKEIKRLYEKGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +ENSE LS LK++ IPH VLNA K REAE + AG+K ++TI+TNMAGRGTDI
Sbjct: 439 TADIENSETLSRALKREHIPHQVLNA--KNHEREAEIIKDAGQKKSVTIATNMAGRGTDI 496
Query: 397 ILGGNPKMLA 406
+LG K L
Sbjct: 497 VLGEGVKELG 506
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 11/200 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLHV+GT HESRRIDNQLRGR+GRQGDPGS++F VSL+D++ + F D
Sbjct: 499 GEGVKELGGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQFYVSLEDDLLRLFGSDKIN 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ +I DED P+E I + Q E F RK+++E+D++L QR+ +Y
Sbjct: 559 G--LLDKIGVDEDQPVEHKLITNSIERAQQKVESRNFDTRKAILEYDDILNKQREVIYAQ 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L + ++I ++ +VD+++ + HP W L+ +L E++ G
Sbjct: 617 RRKLL--ETDELQEKINGMLKQLVDDVLEMFMSDDLHPDEWDLEGML-EYLHGNG----- 668
Query: 708 LFAGISGDTLL-KSIEELPE 726
L G+ L+ KS EE+ E
Sbjct: 669 LAKGVEATNLVGKSREEIKE 688
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 777 TTNLL---RKYLGDILIASYLNVVQESR--YDDVYMKEVERAVLVKTLDCFWRDHLINMN 831
TNL+ R+ + + +I + L QE R D + + + ++ +D W HL NM+
Sbjct: 675 ATNLVGKSREEIKEKIIINSLASYQEKREKVDTERFDRIIKFLALRVIDRKWMSHLDNMD 734
Query: 832 RLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVES 873
L + +R++G ++PL EYK + F + ++ R VE+
Sbjct: 735 ELRQGIGLRAYGQKDPLTEYKFESFDMFNELTASIREDIVET 776
>gi|443630927|ref|ZP_21115108.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348732|gb|ELS62788.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 841
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/427 (47%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + +LKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQSLKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNQPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKLLK 695
R ++ N ++I + M E P + P W LD L++
Sbjct: 614 RFEVIDSEN---LREIVENMIKSSLERAIATYTPREELPEEWKLDGLVE 659
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E ++ + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEEKFGEEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F M+ +
Sbjct: 759 MFEHMIES 766
>gi|436840503|ref|YP_007324881.1| translocase binding subunit (ATPase) [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169409|emb|CCO22777.1| translocase binding subunit (ATPase) [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 837
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/430 (45%), Positives = 285/430 (66%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VL+ G IAEMKT ++TVNDYLA RDA
Sbjct: 81 MRHYDVQMVGGMVLNSGRIAEMKTGEGKTLVATLPAVLNALSGKGVHLITVNDYLANRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLG++VG++ G +ER+ Y CDITY N+E GFDYLRDN+ EQLV
Sbjct: 141 EWMGKLYNFLGMTVGVVVHGQTDQERQEAYACDITYGTNNEFGFDYLRDNMKFYKEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG + + Y + LL +G + V+ K
Sbjct: 201 R---ELNFAIVDEVDSILIDEARTPLIISGSSDDATSMYGQINSIIPLLKKGEDFEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
S+ +T++G+ E L+ ++L+D ++ + +M +KA + RDV YIV++G+ +I
Sbjct: 258 GRSITMTDDGVIKCEKILKIDNLYDAQHISYQHHIMQGIKAHHLFARDVDYIVKDGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+K+++++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEGVKVESENQTLASITFQNYFRMYNKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PTN +R+D P + T R K+ ++ S ++ G+PVLVG
Sbjct: 378 TESVEFAQIYDLEVIVIPTNTKMVRIDHPDSIYKTQREKYNAIADDIASKYKSGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S LLK++ IPH+VLNA K+ +EAE VA+AG K +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELISGLLKKKKIPHDVLNA--KHHEQEAEIVAEAGFKGHVTIATNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LG K L
Sbjct: 496 VLGEGVKELG 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGLH+IGT HESRRIDNQLRGR+GRQGDPGSTRF ++L D++ + F +
Sbjct: 498 GEGVKELGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSTRFYLALDDDLMRLFG--SER 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ +E PIE + + + Q E + F IRK L+++D V+ QR+ +Y L
Sbjct: 556 IAGIMDKLGMEEGEPIENGMVTKAIENSQKKVEGHNFEIRKQLLDYDNVMNQQREVIYTL 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ++ ++ S ++++ + D+ F P++ + LD+ +E + I LD+
Sbjct: 616 RREVM--HSDDISDMTSEFVEELFDDCFF----PVEEAKGRPLDEETEEMVRIR---LDE 666
Query: 708 LFA 710
+F
Sbjct: 667 IFG 669
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 790 IASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLE 849
+ S L ++ES + + E++R L++ LD W++HL+NM+ L + +R +G ++P
Sbjct: 690 VDSILGKLKESATE--HYHEIQRYFLLEALDRNWKEHLLNMDHLREGIGLRGYGQKDPKH 747
Query: 850 EYKIDGCRFFISMLSATRRLTVESLVQ 876
EYK +G F +ML + T+ +L
Sbjct: 748 EYKREGFELFRAMLDRIKENTIRALCH 774
>gi|381211565|ref|ZP_09918636.1| preprotein translocase subunit SecA [Lentibacillus sp. Grbi]
Length = 838
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 272/430 (63%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R F VQ+ G LH+G+IAEMKT ++TVNDYLA RDA
Sbjct: 80 LRPFPVQLSGAIALHEGNIAEMKTGEGKTLASTMPSYLNAISGKGVHIITVNDYLAGRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M ++ FLGL+VGL GM EE+R Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 KDMGELYNFLGLTVGLNGNGMTKEEKREAYNCDITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAI+DEVDS+LIDE R PL+ISG A K Y A L + YT + K
Sbjct: 200 R---PLHFAIIDEVDSILIDEARTPLIISGSAQKSATMYQQANGFVRTLSRETDYTYDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V+LTEEGI AE +L+D N V ALKA RD Y+V+ G+ +I
Sbjct: 257 TKGVQLTEEGINKAERYFNIENLFDLNHVTLTHHVNQALKAHVSMHRDTDYVVQEGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDQFTGRLMKGRRYSDGLHQAIEAKEGLQIQNESMTLASITFQNFFRMYEKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P IR D + + GK+ ++++ G+PVLVG
Sbjct: 377 TEEEEFRNIYNMDVIAIPTNEPIIRDDKSDMIYKSIEGKFRAVAEDIKERHVAGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S +LK+ G+PHNVLNA+ Y REAE + AG+K A+TI+TNMAGRGTDI
Sbjct: 437 TVAVETSELISKMLKKAGVPHNVLNAKNHY--REAEIIENAGQKGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 495 KLGDGVKELG 504
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGD G ++F +S++DE+ ++F +
Sbjct: 497 GDGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDSGMSQFYLSMEDELMRRFGSENMR 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PIE + R + Q E F RK+++ +D+VL QR+ +Y
Sbjct: 557 S--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNFDARKTVLSYDDVLRQQREIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKLLK 695
R ++ NE+ + + +++ ++ I+ N D L W LD +++
Sbjct: 615 RFDVIE-TNENLREIVEGMIKSTLERIVEANTQDELDEN--WELDSIIE 660
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 790 IASYLNVVQESRYDDV-------YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
I Y+ ++RYD+ M+E E+ ++++T+D W DH+ M++L +++R++
Sbjct: 685 IVDYIFEKVKTRYDEKEQELTPEQMREFEKVIVLRTVDTKWMDHIDQMDQLRQGIHLRAY 744
Query: 843 GHRNPLEEYKIDGCRFFISML 863
G +PL+EY+ +G + F M+
Sbjct: 745 GQNDPLQEYQAEGFQMFEEMV 765
>gi|258406131|ref|YP_003198873.1| preprotein translocase subunit SecA [Desulfohalobium retbaense DSM
5692]
gi|257798358|gb|ACV69295.1| preprotein translocase, SecA subunit [Desulfohalobium retbaense DSM
5692]
Length = 836
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 283/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT +VTVNDYLA+RDA
Sbjct: 81 MRHFDVQLMGGIILHQGRIAEMKTGEGKTLVATLPLVLNALSGKGAHLVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGLSVG I GM EER++ Y DITY N+E GFDYLRD++ ++QLV
Sbjct: 141 EWMGQLYNFLGLSVGSIMHGMTDEERKAAYAADITYGTNNEFGFDYLRDHMKFYADQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
HFAIVDEVDS+LIDE R PL+ISG A A Y + L + + V+ K
Sbjct: 201 ---GELHFAIVDEVDSILIDEARTPLIISGPAEDSTAMYKRINTIVPQLKRDRDFNVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V TE+G+A E L +L+D +N + ++ ALKA E + RD YIV++G+ +I
Sbjct: 258 AKTVTFTEDGVARCEQILGLENLFDAQNIHFQHHILQALKAHELFTRDDDYIVKDGQVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+K++A++ +AQIT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEGVKVEAENQTLAQITFQNFFRMYDKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V +PT+ P +R D + T + K+E QE+ ++ G+PVLVG
Sbjct: 378 TEAVEFNQIYNLEVSVIPTHKPMVREDFSDVVYRTQQEKYEAIAQEISDLYTKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS++ SE +S+LLK++ +PH VLNA K+ +EAE VA AG + +TI+TNMAGRGTDI
Sbjct: 438 TTSIDKSELISNLLKKRKVPHEVLNA--KHHEKEAEIVAGAGERGKVTIATNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LG + L
Sbjct: 496 VLGDGVRELG 505
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 163/347 (46%), Gaps = 72/347 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GDGVRELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLLRLFGSDRIS 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ +E IE I R + Q E + F IRK L+E+D+V+ QR+ +Y
Sbjct: 558 G--LMQKLGVEEGQAIENKMISRAIENAQRRVEAHNFDIRKQLLEYDDVMNQQREVIYTQ 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ I+ + +++++DE + VD + P + + DK
Sbjct: 616 RREIMASDD----------LESMIDEFVDEVVDVIYQPVHMA-DK--------------- 649
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
E P+ ++D+ D+ LKRWL S
Sbjct: 650 ---------------EGPDQETLDMVQAQLEDV--------------FGLKRWLD-TSAG 679
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L R T + +L + YL ++ R L+++LD W++HL
Sbjct: 680 LPDQETTRETVRKILAHLKEEAGEHYLEIL--------------RFFLLESLDRIWKEHL 725
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ M+ L + +R +G ++P +EYK +G F ML + T+++L
Sbjct: 726 LTMDHLKEGIGLRGYGQKDPKQEYKREGFELFQDMLFRIKESTLKAL 772
>gi|220915889|ref|YP_002491193.1| preprotein translocase subunit SecA [Anaeromyxobacter dehalogenans
2CP-1]
gi|219953743|gb|ACL64127.1| preprotein translocase, SecA subunit [Anaeromyxobacter dehalogenans
2CP-1]
Length = 962
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/431 (48%), Positives = 279/431 (64%), Gaps = 29/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 99 MRHFDVQLIGGAVLHSGKIAEMKTGEGKTLVATLPCVLNALSGRGVHVVTVNDYLARRDA 158
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RF GL G+I G+ ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 159 EWMGRLYRFCGLRTGVIVHGLTDRERQEAYGSDITYGQNNEFGFDYLRDNMKFRLQDYVQ 218
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG + + Y V +++ +TV+ K
Sbjct: 219 ---GELNFAIVDEVDSILIDEARTPLIISGPSDESSELYARVNGVIPSMIRDQDFTVDEK 275
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ ++ +T+ G+ E L +L+ E V AL+A YR +V Y+V++G+ LI
Sbjct: 276 SRTIVMTDAGVEKMEKKLSVQNLYAPEEIETLHHVEQALRAHHIYRNEVDYVVKDGEVLI 335
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQAVEAKEG+KI+A++ +A I++Q+ F++Y KL+GMTGTA
Sbjct: 336 VDEFTGRLMPGRRWSDGLHQAVEAKEGVKIEAENQTLATISFQNYFRMYSKLAGMTGTAD 395
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K + + V+ +PTN N+R D + T K++ E+E G+PVLVG
Sbjct: 396 TEAEEFAKTYNIDVVVIPTNKKNVRKDSEDVVYKTEGEKFDALCTEIEQRHGTGQPVLVG 455
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SV SE +S LLK++G+PH VLNA K+ REAE VAQAGRK A+TISTNMAGRGTDI
Sbjct: 456 TVSVAKSEVVSTLLKRRGVPHAVLNA--KHHQREAEIVAQAGRKGAVTISTNMAGRGTDI 513
Query: 397 ILGGNPKMLAK 407
ILGGN +M+AK
Sbjct: 514 ILGGNAEMMAK 524
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ + + E EV +LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+ F +SL+
Sbjct: 556 AALEKLKAQTTAEHEEVVKLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSIFYLSLE 615
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ + F D L+ R+ + IE + + + G Q E + F IRK+L+E+D
Sbjct: 616 DELMRIFGSDRIQG--LMGRMGMKDGEQIEHPWLTKAIEGAQKKVEAHNFDIRKNLLEYD 673
Query: 635 EVLEVQRKHVYDLRQSIL 652
+V+ QR+ +Y LR+ +L
Sbjct: 674 DVMNQQRRSIYRLRRMVL 691
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
E+ + ++ +D W+DHL++M+ L + +R +G ++P +EYK +G F+ M
Sbjct: 816 EQYLYLQAIDQQWKDHLLSMDHLRQGIGLRGYGQKDPKQEYKKEGYEMFVQM 867
>gi|347760568|ref|YP_004868129.1| protein translocase subunit [Gluconacetobacter xylinus NBRC 3288]
gi|347579538|dbj|BAK83759.1| protein translocase subunit [Gluconacetobacter xylinus NBRC 3288]
Length = 913
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/437 (50%), Positives = 281/437 (64%), Gaps = 37/437 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLSALAGQGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGLSVG++ M +ERR+ YR DITY N+E GFDYLRDN+ E +V
Sbjct: 141 EQMGQLYSFLGLSVGVVVPNMPEDERRAAYRADITYGTNNEFGFDYLRDNMKYRVEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKV-AELLVQGLHYTVEL 156
R PFH AIVDEVDS+LIDE R PL+ISG A + Y +V L+V Y +
Sbjct: 201 R---PFHHAIVDEVDSILIDEARTPLIISGPAEDSSSLYRSVDEVMTALVVDPQAYEKDE 257
Query: 157 KNNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K SV LTE+G E L T L+D +N V +L+A + RDV YIV
Sbjct: 258 KFRSVILTEKGAEQVEDLLRTAGVLHDGGLYDSQNVAVIHHVQQSLRAHTLFTRDVDYIV 317
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
R GK +II+E TGR+ E RR+S+G+HQA+EAKE +++Q ++ +A IT+Q+ F++YP+LS
Sbjct: 318 RGGKVVIIDEFTGRMMEGRRYSDGLHQALEAKEHVEVQQENQTLASITFQNYFRMYPRLS 377
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE EF ++++ VIE+PTNLP R D + + TAR K+E ++ +
Sbjct: 378 GMTGTAMTEADEFADIYKLEVIEIPTNLPVARKDDDDEVYLTAREKYEAVAALIKEISAT 437
Query: 330 -GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 388
G+PVLVG+TS+E SEYLS LL+ GI HNVLNAR + EAE VAQAG AITI+TN
Sbjct: 438 SGQPVLVGTTSIEKSEYLSSLLRNNGIQHNVLNAR--FHELEAEIVAQAGAPGAITIATN 495
Query: 389 MAGRGTDIILGGNPKML 405
MAGRGTDI LGGN ML
Sbjct: 496 MAGRGTDIKLGGNVDML 512
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V+ GGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F D +
Sbjct: 544 VREAGGLYVIGTERHESRRIDNQLRGRAGRQGDPGNSRFFISLEDDLMRIFGTDRMG--N 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ E I I + L Q E F +RK+ +++D+V+ QRK VY R+
Sbjct: 602 MLQKLGLKEGEAIVHPWINKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVYAQRRE 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
+ A+E S + + + V+ +++ + P W D+L ++
Sbjct: 662 YM--ASEDVSPIVAEMREDVIHDMVARRIPEKSFPEQWLKDELAQD 705
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VE+ VL+ T D W++HL+ +++L + +R++G ++PL E+K + F +ML
Sbjct: 754 MRYVEKQVLLTTFDAVWKEHLLALDQLRQGIGLRAYGQKDPLNEFKHEAFELFHAMLDHL 813
Query: 867 RRLTVESLVQYWSSP 881
R ++ + +P
Sbjct: 814 RVRVTGTMARVEMAP 828
>gi|284046047|ref|YP_003396387.1| preprotein translocase subunit SecA [Conexibacter woesei DSM 14684]
gi|283950268|gb|ADB53012.1| preprotein translocase, SecA subunit [Conexibacter woesei DSM
14684]
Length = 970
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/466 (45%), Positives = 285/466 (61%), Gaps = 58/466 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDGSIAEM+T +VTVNDYLA+RD
Sbjct: 81 MRHFDVQMIGGMVLHDGSIAEMRTGEGKTLTGTLPAILNSLAGKGVHIVTVNDYLARRDC 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ LG++ G++Q EE+R+ Y D+TY NSE GFDYLRDN+A + E V
Sbjct: 141 EWMSPIYDALGVTYGVLQNMQPTEEKRAAYAADLTYGTNSEFGFDYLRDNMAGSLEDKVQ 200
Query: 98 -----------------RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA 140
R FAIVDEVD++LIDE R PL+ISG + Y A
Sbjct: 201 HGGRDLGEVRTAKDRLDRRSAAHTFAIVDEVDNILIDEARTPLIISGAPEEAGDLYARFA 260
Query: 141 KVAELLVQG-----------------LHYTVELKNNSVELTEEGIALAEMALETNDLWD- 182
++A +L G + + K+ +V +TE G+A AE L + L+
Sbjct: 261 RLAPMLTPGRRPEGMDPRAKKEFVADFDFEFDEKHRTVSITERGVAKAERFLGIDHLYRA 320
Query: 183 ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKE 242
EN ++ +L+A+ YRRDV Y V +G+ +II+E TGR+ E RRWSEG+HQA+EAKE
Sbjct: 321 ENGHLVNHLIQSLRAQALYRRDVDYAVIDGEVMIIDEFTGRILEGRRWSEGLHQAIEAKE 380
Query: 243 GLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRV 302
G+ + ++ +A ITYQ+ F+LY KLSGMTGTA TE EF+K++++ V++VPTN P +R
Sbjct: 381 GVNVTEENQTMATITYQNYFRLYDKLSGMTGTAITEATEFMKIYRLGVVQVPTNRPMVRK 440
Query: 303 DLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNA 362
D Q + T GKW E+ R G+P+LVG+ SVE SE L L ++G+PH VLNA
Sbjct: 441 DQNDQVYKTKEGKWTAVVDEIVERNRRGQPILVGTISVEVSEDLGQRLAKRGVPHIVLNA 500
Query: 363 RPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
+P++A +E ETVA+AGR A+TI+TNMAGRG DI LGGNP+ LA +
Sbjct: 501 KPEHAEKEGETVAEAGRSGAVTIATNMAGRGVDIKLGGNPEHLAAR 546
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 184/411 (44%), Gaps = 86/411 (20%)
Query: 465 GKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHC 524
G+S A + V++ N + L + + P P Y +VL + E
Sbjct: 516 GRSGAVTIATNMAGRGVDIKLGGNPEHLAAREVVKLGLQPDDPDYEEHYATVLPEIERRV 575
Query: 525 SNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFD 584
+ +V GGL++IGT HESRRIDNQLRGRAGRQGDPG TRF +S +D++ + F+ +
Sbjct: 576 EEDRDKVMEAGGLYIIGTERHESRRIDNQLRGRAGRQGDPGETRFYLSAEDDLVRLFAGE 635
Query: 585 TSWAVDLISRITNDE--DMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ + T+DE + PIE + +Q+ Q E+ F IRK ++++D+V+ QR+
Sbjct: 636 RIYKILDRFGTTDDEGKEEPIEAGLLSKQIEKAQKKVEEQNFLIRKRVLDYDDVMNEQRR 695
Query: 643 HVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
VY R +L G + E ++I Q ++ VDE P + W ++ L A
Sbjct: 696 IVYAYRDEVLDGRDMGEPAREEISQMLERTVDEHT-----PGDYIEDWDVEGLF----AR 746
Query: 701 AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRW 760
G+I FA D+N PD S++R
Sbjct: 747 VGEIFPLSFA------------------QEDVN----PD----------------SIER- 767
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD-------DVYMKEVERA 813
+ L+R ++ D L +RYD D M+ +ER
Sbjct: 768 -----------------SELVRLFVDDAL----------TRYDERERELGDELMRVLERY 800
Query: 814 VLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
+L++ +D W++HL +M+ L +++R F PL YK +G F +++
Sbjct: 801 LLLQIIDQRWQEHLYDMDYLREGIHLRGFAQIEPLVAYKNEGFTLFQDLMN 851
>gi|3522869|gb|AAC34131.1| SecA [Mycobacterium bovis]
Length = 948
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 288/438 (65%), Gaps = 30/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++G A LH G++AEMKT +VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG A + V ++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGLQLVHRVR-RLAPLMEKDVHYEVDLRK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 257 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EGI QA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRVLIGRRYNEGIDQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 377 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + +R L
Sbjct: 495 LGGNVDFLTDQRLRERGL 512
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 166/349 (47%), Gaps = 59/349 (16%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++ F
Sbjct: 536 ASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRR--F 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ + L++R+ +D+PIE + R + Q E+ F +RK+++++DEV+ QRK
Sbjct: 594 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGK 703
+Y R+ IL G E+ Q ++ V+ + G + W LD L + +
Sbjct: 654 IYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDALWTALKTLYPE 710
Query: 704 ILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
GI+ D+L RK +R
Sbjct: 711 -------GITADSLT---------------------------------RKDHEFER---- 726
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQ-ESRYDDVYMKEVERAVLVKTLDCF 822
DDLT+ LL L D A + E + M+++ER VL+ +D
Sbjct: 727 --DDLTRE-------ELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVIDRK 777
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
WR+HL M+ L + +R+ H +PL EY+ +G F++ML + +V
Sbjct: 778 WREHLYEMDYLKEGIGLRAMAHGDPLVEYQREGYDMFMAMLDGMKEESV 826
>gi|308175262|ref|YP_003921967.1| translocase binding subunit (ATPase) [Bacillus amyloliquefaciens
DSM 7]
gi|384161147|ref|YP_005543220.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
TA208]
gi|384166041|ref|YP_005547420.1| translocase binding subunit (ATPase) [Bacillus amyloliquefaciens
LL3]
gi|384170236|ref|YP_005551614.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
XH7]
gi|307608126|emb|CBI44497.1| translocase binding subunit (ATPase) [Bacillus amyloliquefaciens
DSM 7]
gi|328555235|gb|AEB25727.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
TA208]
gi|328913596|gb|AEB65192.1| translocase binding subunit (ATPase) [Bacillus amyloliquefaciens
LL3]
gi|341829515|gb|AEK90766.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
XH7]
Length = 841
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 278/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGLALHEGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEIFTFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A K Y A L + YT ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVSIPTNQPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 89/349 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK
Sbjct: 556 A--MLDRFGMDDTTPIQSKMVSRAVESSQKRVEGNNFDSRK------------------- 594
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
Q+ QY D+++ + + R+ +D + L D
Sbjct: 595 --------------QLLQY-----DDVLRQQREVIYKQRFEVID----------SENLRD 625
Query: 708 LFAGISGDTLLKSI------EELPELNSID-----INNFYFPDLPKPPNLFRGIRRKSSS 756
+ G+ +L ++I EELPE ++D +N Y +
Sbjct: 626 IVEGMIKSSLERAIAAYTPSEELPEEWNLDGLVELVNTTYLDEGA--------------- 670
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
L K+ + + + + + D ++ Y +E + M+E E+ +++
Sbjct: 671 -----------LEKSDIFGKEPDEMHEMIMDRIMTKYNE--KEENFGAEQMREFEKVIVL 717
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W DH+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 718 RAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|375085783|ref|ZP_09732406.1| preprotein translocase, SecA subunit [Megamonas funiformis YIT
11815]
gi|374566383|gb|EHR37626.1| preprotein translocase, SecA subunit [Megamonas funiformis YIT
11815]
Length = 836
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 274/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T ++TVNDYLA+RD+
Sbjct: 80 MRHFDVQMIGGICLHEGKIAEMRTGEGKTLVATLAVYLNALTGKGVHMITVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++R LGL+VGLI M R+ Y CDIT+ N+E GFDYLRDN+ + EQ+V
Sbjct: 140 EWMGRLYRSLGLTVGLITHDMDFPSRKFAYNCDITFGTNNEFGFDYLRDNMVVSKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AI+DEVDS+LIDE R PL+ISG +K Y + AK L +G Y + K
Sbjct: 200 R---ELNYAIIDEVDSILIDEARTPLIISGPGAKSTDMYAIMAKAVANLKEGEDYVLNEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + +A E AL +L+D N + AL+AK +RD Y+VR+G+ +I
Sbjct: 257 EKTVSPNDSAVAKVEKALNIKNLYDSANIEMSHCFTQALRAKAMMKRDRDYVVRDGEIVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSEGLHQAIEAKEGVKIQRESQTLATITFQNYFRMYEKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++++PVI VPTN P R+D P + T + K + ++ G+PVLVG
Sbjct: 377 TEENEFLKIYKLPVIVVPTNKPIKRIDYPDVIYKTKKAKMKAVINTIKECHAKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S LK+QGI H VLNA KY EAE + AG+K A+TI+TNMAGRGTDI
Sbjct: 437 TTSIVQSEEVSAQLKRQGIDHKVLNA--KYHEMEAEIIKDAGQKGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 SLG 497
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 167/336 (49%), Gaps = 67/336 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F D
Sbjct: 497 GEGVAEVGGLYVIGTERHESRRIDNQLRGRAGRQGDPGASRFFLSLEDDLMRLFGSDN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+++ ++ ED PIE + R + Q E F IRK ++E+D+V+ QR+ +YD
Sbjct: 555 IANIMEKLGMGEDDPIEHKLVTRSIEQAQKKVEARNFDIRKHVIEYDDVMNQQREVIYDQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL G E+ + I + ++ ++D + + +P W+LD L++E
Sbjct: 615 RRKILLG--ENLYENIIEMVKRIIDSQMDRYANEKLYPEEWTLDGLIQE----------- 661
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+ Y P K + +K L S D
Sbjct: 662 ------------------------AEDIYAP--------------KGTLVKEQLEAMSRD 683
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
K Y+ + +Y N +E + M+++ER +++K +D W +HL
Sbjct: 684 ELKETLYKVAKD------------NYDN--REKLFGSEVMRDLERIIMLKVVDNKWMEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+M+ L +++R++G RNPL EYKI+G F +M+
Sbjct: 730 DHMDMLREGISLRAYGQRNPLVEYKIEGHDMFQAMI 765
>gi|367468570|ref|ZP_09468425.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Patulibacter sp. I11]
gi|365816354|gb|EHN11397.1| Protein export cytoplasm protein SecA ATPase RNA helicase (TC
3.A.5.1.1) [Patulibacter sp. I11]
Length = 951
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/458 (47%), Positives = 280/458 (61%), Gaps = 50/458 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++G VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 79 MRHFDVQLVGAQVLHGGDIAEMKTGEGKTLTATLAVVLNALPGHGVHVVTVNDYLAERDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ LGLSVG++Q E +R+ Y DITY NSE GFDYLRDN+A E+ V
Sbjct: 139 EWMGRLYTALGLSVGILQNMQPHEVKRAAYAADITYGTNSEFGFDYLRDNMAQTLEEKVQ 198
Query: 98 RW--------PKPFH-FAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ 148
P H FAIVDEVD++LIDE R PL+ISG + Y AK+A+ +V
Sbjct: 199 HGGRIGEDGRPVAMHNFAIVDEVDNILIDEARTPLIISGAPEQAADLYVTFAKMAKTMVP 258
Query: 149 G-----------------LHYTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARF 190
G + + K+ +V +TE G+ AE L + L+ EN
Sbjct: 259 GKKPEGMDPRTKKEFVADFDFEFDEKHKTVAVTERGVEKAERFLGIDHLYRAENGHLVNH 318
Query: 191 VMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADS 250
+ ALKA+ Y+RDV Y V NG+ II+E TGR+ E RRWSEG+HQAVEAKEG+ IQ ++
Sbjct: 319 LHQALKAESLYKRDVDYAVVNGEVAIIDEHTGRILEGRRWSEGLHQAVEAKEGVAIQEEN 378
Query: 251 VVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFA 310
+A +T Q+ F++Y KL+GMTGTA TE EF+K++++ V+ VPTN P RVD F
Sbjct: 379 QTLATVTLQNFFRMYKKLAGMTGTALTEATEFMKIYKLGVVPVPTNQPVARVDNNDDVFK 438
Query: 311 TARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAARE 370
T GKW +EV +PVLVG+ SVE SE L + ++ GIPH VLNA+P++AA E
Sbjct: 439 TKDGKWAAVTREVVERHARQQPVLVGTVSVEVSELLGGMFRKAGIPHTVLNAKPEHAAIE 498
Query: 371 AETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
ETVA+AGR A+TI+TNMAGRG DI LGG+P+ L +K
Sbjct: 499 GETVAEAGRPGAVTIATNMAGRGVDIKLGGDPEHLLRK 536
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 159/345 (46%), Gaps = 72/345 (20%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ + V GGL + GT HESRRIDNQLRGRAGRQGDPG +RF +S QD++ + F+
Sbjct: 565 CAADREIVVAAGGLFICGTERHESRRIDNQLRGRAGRQGDPGESRFFLSAQDDLVRIFAG 624
Query: 584 DTSWAVDLISRITNDED----MPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEV 639
D + + + R + +D +PI + +Q+ Q + E+ F IRK ++E+D+V
Sbjct: 625 DRIYKI--LDRFPSTDDDGNELPISAGMLTKQIEKAQRTVEERNFLIRKRVLEYDDVQNE 682
Query: 640 QRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIA 699
QR+ VY R IL G + S Q DE+ GNV + + L E++
Sbjct: 683 QRRVVYAYRDQILEGRDMSDDAQ---------DEV--GNV----------ITRALDEYLP 721
Query: 700 IAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKR 759
+ F D L ++EE+ + +ID P + R L+R
Sbjct: 722 ------SEDFEAWDMDGLFTALEEIWSV-TIDREEL------DPDTVDR------EDLQR 762
Query: 760 WLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTL 819
L DD A L K LG L M++VER +L+ +
Sbjct: 763 RL---HDDAI------AAYELREKQLGPDL-----------------MRQVERYLLLNII 796
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
D WR+HL +M+ L +++R + P+ YK + F +++
Sbjct: 797 DQRWREHLYDMDYLREGIHLRGYAQIEPIVAYKNEAYDLFQDLMA 841
>gi|386393490|ref|ZP_10078271.1| preprotein translocase, SecA subunit [Desulfovibrio sp. U5L]
gi|385734368|gb|EIG54566.1| preprotein translocase, SecA subunit [Desulfovibrio sp. U5L]
Length = 837
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 282/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGITLHQGKIAEMKTGEGKTLVATLPIVLNALSAKGVHLITVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG+I G+ ER++NYR DITY N+E GFDYLRDN+ EQLV
Sbjct: 141 AWMGKLYNFLGLSVGVIVHGLDDAERQANYRADITYGTNNEFGFDYLRDNMKFYKEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +F+IVDEVDS+LIDE R PL+ISG+A Y LL + +T++ K
Sbjct: 201 R---ELNFSIVDEVDSILIDEARTPLIISGQAEDSSTLYARIDAFIPLLRKEKDFTIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT++G+A E L+ ++L+D N + V+ ALKA ++RDV Y+V++G+ LI
Sbjct: 258 ARTVLLTDDGVARMEDVLKIDNLYDAANITFQHHVLQALKAHHIFQRDVDYVVKDGQVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE ++++A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEHVEVEAENQTLATITFQNYFRMYKKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PT+ +R D P + T R K+E +V+ + + G+PVLVG
Sbjct: 378 TEAVEFREIYDLEVISIPTHRAMVRKDFPDLVYKTQREKFEAIAHDVKELHQKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LL++ G+PH+VLNA K +EAE VAQAG +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELLSGLLQKTGVPHDVLNA--KNHEKEAEIVAQAGHSGRVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GPGVTDLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLMRLFGSDRLK 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ ++ PIE + R + Q E + F IRK L+E+D V+ QR+ +Y
Sbjct: 558 G--LMDKLGMEDGEPIENRMVSRAIENAQKRVEAHNFEIRKQLLEYDNVMNQQREVIYSR 615
Query: 648 RQSILTGANESCSQQIF--QYMQAVVDEII 675
R+ ++ E+ + + F Y++ +VDEI
Sbjct: 616 RRQLM----ETSTPETFASDYIEDIVDEIF 641
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ KE+ R L+ TLD W++HL++M+ L + +R +G ++P +EYK +G F ++ +
Sbjct: 702 HYKEIARYFLLDTLDRHWKEHLLSMDHLRDGIGLRGYGQKDPKQEYKREGFELFQQLIYS 761
Query: 866 TRRLTVESL--VQYWSSPMESQ 885
R + +L VQ S E +
Sbjct: 762 MRDAAIRALSRVQIRSEVKEQE 783
>gi|308177881|ref|YP_003917287.1| preprotein translocase subunit SecA [Arthrobacter arilaitensis
Re117]
gi|307745344|emb|CBT76316.1| preprotein translocase subunit SecA [Arthrobacter arilaitensis
Re117]
Length = 881
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/440 (47%), Positives = 286/440 (65%), Gaps = 30/440 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA LH G+IAEM+T VVT ND+LAQ +
Sbjct: 80 MRHFDVQLMGGAALHMGNIAEMRTGEGKTLVATAPAYLNALTGKGVHVVTTNDFLAQYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV RFLGLS G I P ERR Y DITY N+E GFDYLRDN+A + ++LV
Sbjct: 140 DLMGRVFRFLGLSCGCILSSQKPNERRKQYEADITYGTNNEFGFDYLRDNMAWSKDELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R +F IVDEVDS+LIDE R PL+ISG+AS DV R Y +K+ L + Y V+
Sbjct: 200 RG---HNFVIVDEVDSILIDEARTPLIISGQASGDVNRWYTEFSKIVSRLKREDDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K ++ + E GI E L ++L++ N+ P F+ NA+KAKE +++D Y+V NG+ +
Sbjct: 257 KKRTIGVLESGIEKVEDYLGIDNLYEANNTPLIGFLNNAIKAKELFKKDKDYVVVNGEVM 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR RR+SEG+HQA+EAKE ++I+A++ +A +T Q+ F++Y K+SGMTGTA
Sbjct: 317 IVDEHTGRALAGRRYSEGMHQAIEAKESVEIKAENQTLATVTLQNYFRMYSKISGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+E+PTN P IR+D + K+ +++ G+P+LV
Sbjct: 377 QTEAAEFMGTYKLGVVEIPTNKPAIRMDQSDYIYKNEVAKFNAVVEDIAQRHATGQPILV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LL ++GI H VLNA K AREA VA AGRK A+T+STNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSRLLSKKGIRHEVLNA--KQHAREAAVVAMAGRKNAVTVSTNMAGRGTD 494
Query: 396 IILGGNPKMLAKKIIEDRLL 415
I+LGGN + LA +E R L
Sbjct: 495 IMLGGNAEFLAVAEMERRGL 514
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 79/367 (21%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
V + + E EV LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +S+ D
Sbjct: 530 VFAKAKQTVAAESKEVAELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSMTD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ ++ F++ A +++ + ED+ +E + R + Q E RK+++++D+
Sbjct: 590 DLMRR--FNSGMAERIMNNPSMPEDVALESKMVSRAIESAQAQVEGVNAEQRKNVLKYDD 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL-- 693
V+ QR+ +Y R+SIL G + +++ +++ VV ++ + P W L L
Sbjct: 648 VMNRQREAIYADRRSILEG--DDLEEKVGHFLEDVVKAMVL-EATQVGDPGEWELKSLWT 704
Query: 694 -LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPK--PPNLFRGI 750
LK+ I G LD++ G L + + E + + + + K P+ R +
Sbjct: 705 NLKQLYPI-GITLDEVVEEAGGVGHLSA--QFLEREILSDAQYQYEEREKLVGPSTMRDL 761
Query: 751 RRK---SSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYM 807
R+ S+ ++W QE Y+ Y+
Sbjct: 762 ERRVVLSTIGRKW-------------------------------------QEHLYEMDYL 784
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
KE + +R+ R+PL EY+ +G F +M+ R
Sbjct: 785 KE--------------------------GIGLRAMAQRDPLVEYQREGYTMFQTMMEGIR 818
Query: 868 RLTVESL 874
++ +L
Sbjct: 819 EESIGTL 825
>gi|379714806|ref|YP_005303143.1| preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 316]
gi|377653512|gb|AFB71861.1| Preprotein translocase subunit SecA [Corynebacterium
pseudotuberculosis 316]
Length = 846
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/438 (46%), Positives = 290/438 (66%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GG LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYLVQVMGGVALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHR+LGL VG+I M P ERR+ Y DITY N+ELGFDYLRDN+ + ++LV R
Sbjct: 140 WMGRVHRWLGLEVGVILANMQPTERRAAYNADITYGTNNELGFDYLRDNMVRSLDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG Y V A++ L + +H+ V+ +
Sbjct: 200 ---GHHYAIVDEVDSILIDEARTPLIISGPVDGSSQWYSVFAQITPRLTRDIHFEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+A E L +L+ E+ ++ NA+KA+E + RD YIVRNG+ LI+
Sbjct: 257 RTVGIKEEGVAYVEDQLGIENLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV + RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DDFTGRVLDGRRYNEGMHQAIEAKENVEIKNENQTLATITLQNYFRLYDKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN N R D+ + T K+ ++ G+PVLVG+
Sbjct: 377 EASELHQIYKLDVIPIPTNRDNQREDMTDLVYKTQEAKFAAVVDDIAERVAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+++G+ H+VLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSRLLQRRGVKHSVLNA--KFHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP ++A + +R L
Sbjct: 495 LGGNPDIIADINLRERGL 512
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 16/178 (8%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ GGL+V+GT HESRRIDNQLRGRAGRQGDPG+TRF +S++DE+ W
Sbjct: 542 EVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDPGTTRFYLSMRDELMV-----GCWQS 596
Query: 590 --DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + + G Q S E F +RK+++++DEV+ QRK +Y
Sbjct: 597 MENMMNRLNVPDDVPIEAKMVTNSIKGAQASVENQNFEMRKNVLKYDEVMNEQRKVIYSE 656
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
R+ IL A+ I + +Q ++D+ I VD Y W LD L ++ G
Sbjct: 657 RREILESAD------IAENIQKMIDDTIGAYVDGATANGYVEDWDLDALWNALESLYG 708
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 761 MRNIERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMKDGI 820
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 821 KEETVRQL 828
>gi|330991869|ref|ZP_08315818.1| Protein translocase subunit secA [Gluconacetobacter sp. SXCC-1]
gi|329760890|gb|EGG77385.1| Protein translocase subunit secA [Gluconacetobacter sp. SXCC-1]
Length = 913
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/437 (50%), Positives = 280/437 (64%), Gaps = 37/437 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLSALAGQGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGLSVG++ M +ERR+ YR DITY N+E GFDYLRDN+ E +V
Sbjct: 141 EQMGRLYAFLGLSVGVVVPNMPEDERRAAYRADITYGTNNEFGFDYLRDNMKYRVEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-YTVEL 156
R PFH AIVDEVDS+LIDE R PL+ISG A + Y +V LV Y +
Sbjct: 201 R---PFHHAIVDEVDSILIDEARTPLIISGPAEDSSSLYRAVDEVMVALVADPEAYEKDE 257
Query: 157 KNNSVELTEEGIALAE------MALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K SV LTE+G E L L+D +N V +L+A + RDV YIV
Sbjct: 258 KFRSVILTEKGAEQVEDLLRGAGVLHDGGLYDSQNVAVIHHVQQSLRAHTLFTRDVDYIV 317
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
R GK +II+E TGR+ E RR+S+G+HQA+EAKE +++Q ++ +A IT+Q+ F++YP+LS
Sbjct: 318 RGGKVIIIDEFTGRMMEGRRYSDGLHQALEAKEHVEVQQENQTLASITFQNYFRMYPRLS 377
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE EF ++++ VIE+PTNLP R D + + TAR K+E ++ +
Sbjct: 378 GMTGTAMTEADEFADIYKLEVIEIPTNLPVARKDDDDEVYLTAREKYEAVAALIKEISAT 437
Query: 330 -GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 388
G+PVLVG+TS+E SEYLS LL++ GI HNVLNAR + EAE VAQAG AITI+TN
Sbjct: 438 SGQPVLVGTTSIEKSEYLSSLLRRNGIQHNVLNAR--FHELEAEIVAQAGAPGAITIATN 495
Query: 389 MAGRGTDIILGGNPKML 405
MAGRGTDI LGGN ML
Sbjct: 496 MAGRGTDIKLGGNVDML 512
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 4/166 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V++ GGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F D +
Sbjct: 544 VRKAGGLYVIGTECHESRRIDNQLRGRAGRQGDPGNSRFFISLEDDLMRIFGTDRMG--N 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ E I I + L Q E F +RK+ +++D+V+ QRK VY R+
Sbjct: 602 MLRKLGLKEGEAIVHPWINKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVYAQRRE 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
+ A E S I + + V+ +++ + P W D+L ++
Sbjct: 662 YM--AAEDLSPIITEMREDVIHDMVTRRIPEKSFPEQWLKDELAQD 705
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VE+ VL+ T D W++HL+ +++L + +R++G ++PL E+K + F +ML
Sbjct: 754 MRYVEKQVLLTTFDAVWKEHLLALDQLRQGIGLRAYGQKDPLNEFKHEAFELFHAMLDHL 813
Query: 867 RRLTVESLVQYWSSP 881
R ++ + +P
Sbjct: 814 RVRVTSTMARVEMAP 828
>gi|350267768|ref|YP_004879075.1| Preprotein translocase subunit SecA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349600655|gb|AEP88443.1| Preprotein translocase subunit secA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 841
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 279/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHIVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLG++VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGMTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + +LKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQSLKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R ++ +E+ + + +++ ++ I + P W LD L++
Sbjct: 614 RFEVID--SENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVE 659
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 44/68 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E ++ + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEVKFGEEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F +M+ +
Sbjct: 759 MFENMIES 766
>gi|156740671|ref|YP_001430800.1| preprotein translocase subunit SecA [Roseiflexus castenholzii DSM
13941]
gi|156231999|gb|ABU56782.1| preprotein translocase, SecA subunit [Roseiflexus castenholzii DSM
13941]
Length = 1024
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 286/803 (35%), Positives = 403/803 (50%), Gaps = 179/803 (22%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VLH G IAEMKT +VTVNDYLA+ A
Sbjct: 81 RHYDVQLMGGIVLHQGKIAEMKTGEGKTLVATLPLYLNALTGKGCHLVTVNDYLAKVGAG 140
Query: 39 WMERVHRFLGLSVGLI---------------------QRGMI--PEERRSNYRCDITYTN 75
WM ++ LGLSV I QR + P RR Y DITY
Sbjct: 141 WMGPIYHMLGLSVATISHEYSAIYDPDYIDPKANPDDQRLVHWRPCTRREAYLADITYGT 200
Query: 76 NSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR 135
N+E GFDYLRDN+A + QLV R H+AIVDEVD++LIDE R PL+ISG A +
Sbjct: 201 NNEFGFDYLRDNMAWDLAQLVQR---ELHYAIVDEVDNILIDEARTPLIISGPAQESGDE 257
Query: 136 YPVAAKVAELLVQGLH----------------YTVELKNNSVELTEEGIALAEMALETND 179
Y A + L + + +E ++ SV+LT++G+A E L+ +
Sbjct: 258 YRQFAALVRHLKPSPYTPDQIKKQMIEDPEGDFVIEPRSKSVQLTDQGVARVERLLKIPE 317
Query: 180 LWDENDP----WARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIH 235
DP ++ NAL+A+ Y+RD YIV NG+ +I++E TGR RRWS+G+H
Sbjct: 318 GESLYDPKYYRLTHYLDNALRAEFIYQRDRDYIVENGEVIIVDEFTGRKMIGRRWSDGLH 377
Query: 236 QAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPT 295
QAVEAKEG+K++ ++V +A IT+Q+ F++Y KL+GMTGTA TE +EF K++ + V+ +PT
Sbjct: 378 QAVEAKEGVKMRQENVTLATITFQNYFRMYQKLAGMTGTAYTEREEFGKIYNLDVVVIPT 437
Query: 296 NLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGI 355
+ P IR D Q + T + K+E +E+E M LGRPVLVG+TSVE SE LS++LK++GI
Sbjct: 438 HRPMIRKDYDDQIYRTEKAKFEAVIREIEEMHALGRPVLVGTTSVETSERLSEMLKRRGI 497
Query: 356 PHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
H VLNA KY REA VAQAGRK A+TI+TNMAGRGTDI+LGGNP L ++I
Sbjct: 498 KHQVLNA--KYHEREARIVAQAGRKGAVTIATNMAGRGTDILLGGNPDGLIEEI------ 549
Query: 416 LLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAKYVGKAEGKSWTYQEAKS 475
L R + +E ++P+ + E A A+++ +AEGK +E
Sbjct: 550 --LARRGIKIE----QATPEQIRE-------------AQEEARHITEAEGKE--VRELGG 588
Query: 476 FFSESVEMSQSMNL-KELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRL 534
E +S + +L+ +Q P + YLS+ D ++R
Sbjct: 589 LHIIGTERHESRRIDNQLRGRAGRQG-----DPGSSRFYLSLEDDL----------MRRF 633
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
G + ++++G + ++F D S
Sbjct: 634 GPM--------------DRVKG--------------------LMERFGVDES-------- 651
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+PIE I R + Q E Y F IRK VEFD V+ QR +Y R+ IL G
Sbjct: 652 ------LPIEAGLINRTIESAQTRVEGYNFDIRKHTVEFDNVMNKQRTVIYADRRKILEG 705
Query: 655 AN--ESCSQQIFQYMQAVVDEII---FGNVDPLKHPRYWSLDKLLKEFIA---------I 700
N E I + A+V + G D + W L+ L++ A I
Sbjct: 706 ENMRERVLDMIADEVHALVARYLPETRGRADDFEE---WDLEGLVRAVRAIDPMLTEEKI 762
Query: 701 AGKILDDLFAGISGDTLLKSIEE 723
A + L+ L D L+++IEE
Sbjct: 763 APEHLEHLSRQEIEDALMEAIEE 785
>gi|332670971|ref|YP_004453979.1| preprotein translocase subunit SecA [Cellulomonas fimi ATCC 484]
gi|332340009|gb|AEE46592.1| preprotein translocase, SecA subunit [Cellulomonas fimi ATCC 484]
Length = 937
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/430 (49%), Positives = 282/430 (65%), Gaps = 30/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+ +E
Sbjct: 81 RHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALSGKGVHVVTVNDYLAEYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLGL+ G+I P +RR Y DITY N+E GFDYLRDN+A + E+LV R
Sbjct: 141 LMGRVYRFLGLTTGVILSSQNPTQRREQYAADITYGTNNEFGFDYLRDNMAWSVEELVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG AS D R Y AKV L Y V+ K
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGPASGDTNRWYAEFAKVVRRLQPERDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ + E GI E L ++L++ N P F+ NA+KAKE ++RD Y+V NG+ LI
Sbjct: 258 KRTIGVLEPGIERVEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVMNGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ I+A++ +A IT Q+ F+LY KL+GMTGTA+
Sbjct: 318 VDEHTGRILPGRRYNEGMHQAIEAKEGVNIKAENQTLATITLQNYFRLYSKLAGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN P R+D + + GK++ ++ G+PVLVG
Sbjct: 378 TEAAEFQGTYKLGVVPIPTNRPMQRIDQRDFVYKSEDGKFDAVVADIVERHAKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LK+QG+PH VLNA K AREA VAQAGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSELLSSKLKKQGVPHEVLNA--KQHAREAAIVAQAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLA 406
+LGGN + +A
Sbjct: 496 MLGGNAEFMA 505
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 163/359 (45%), Gaps = 67/359 (18%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
L+ + + E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+Q
Sbjct: 529 GALEKAKSAVAAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSMQ 588
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F++ A +++R EDMP+E + R + Q E F IRK+++++D
Sbjct: 589 DDLMR--LFNSGLAESMMTRAGFPEDMPLESKMVTRGIQSAQAQVESRNFEIRKNVLKYD 646
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ QR+ +Y+ R+ +L G E +Q+ + + V+ I G + P W L+ L
Sbjct: 647 DVMSRQREVIYEQRRRVLEG--EDLHEQVKHFRRDVLSAYIAGATVEGR-PEEWDLEALW 703
Query: 695 KEFIAI--AGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
A+ +++ G T L EL E + + D
Sbjct: 704 TAIRAVYPVSITPEEVVEAAGGVTRL--TRELVEREVLSDAEHAYAD------------- 748
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
R A+ SD++ + R + L RK+ +E Y+ Y+KE
Sbjct: 749 ------REAAVGSDNMRQLERRVTLSVLDRKW-------------REHLYEMDYLKE--- 786
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ R+PL EY+ +G F +M A + TV
Sbjct: 787 -----------------------GIGLRAMAQRDPLVEYQREGFHLFNAMTDAIKEETV 822
>gi|227502894|ref|ZP_03932943.1| preprotein translocase subunit SecA [Corynebacterium accolens ATCC
49725]
gi|227076316|gb|EEI14279.1| preprotein translocase subunit SecA [Corynebacterium accolens ATCC
49725]
Length = 861
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/479 (44%), Positives = 299/479 (62%), Gaps = 34/479 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALEGQGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGLSVG+I M P+ER+ Y CDITY N+ELGFDYLRDN+ +V R
Sbjct: 140 MMGRVHRWLGLSVGVILSEMRPQERKEAYDCDITYGTNNELGFDYLRDNMVRTLNDVVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F IVDEVDS+LIDE R PL+ISG Y V A++A + +G+HY V+ K
Sbjct: 200 G---HNFCIVDEVDSILIDEARTPLIISGPVDGSSQFYGVFAQLAPRMREGIHYEVDHKK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NALKAKE + RD YIVRNG+ +I+
Sbjct: 257 RTIGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNALKAKELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKEQVEIKNENQTLATVTLQNFFRLYEKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++ + V+ +PTN PN R D + + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELHSIYGLDVVPIPTNKPNQRTDHSDRIYKTQEAKFAAVVDDIAEHVEHGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ HNVLNA K+ E + +A+AGR +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLSKRGVQHNVLNA--KHHEEEGQIIARAGRPGTVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
LGGNP+++ + + +R L +EA E+D + K L + S L +L
Sbjct: 495 LGGNPEVILDEKLRERGLDPFEDEEKYQEAWEAEIDGEKERSKRLGDEVRESGGLYVLG 553
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 11/181 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV+ GGL+V+GT HESRRIDNQLRGR GRQGDPG TRF +S++DE+ +F +
Sbjct: 540 GDEVRESGGLYVLGTERHESRRIDNQLRGRTGRQGDPGETRFYLSMRDELMVRFVGQS-- 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 598 MEHMMNRLNVPDDVPIEAKMVSNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYST 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKI 704
R SIL + I ++ ++D+ + V Y W+L++L A+ G
Sbjct: 658 RYSILD------ADDIKDDIRTMIDDTVSAYVAGATATGYVEDWNLEELWNALEALYGPT 711
Query: 705 L 705
+
Sbjct: 712 M 712
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D M+ ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 759 DKQMRNTERMVILPIIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMN 818
Query: 864 SATRRLTVESL 874
+ TV L
Sbjct: 819 EGVKEETVRQL 829
>gi|373494122|ref|ZP_09584728.1| translocase subunit secA 1 [Eubacterium infirmum F0142]
gi|371969256|gb|EHO86707.1| translocase subunit secA 1 [Eubacterium infirmum F0142]
Length = 930
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/443 (47%), Positives = 278/443 (62%), Gaps = 40/443 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 79 MKHFHVQIIGGIVLHQGRIAEMKTGEGKTLMATLPVYLNALSGEGVHVVTVNDYLAKRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+VG + + EER+ Y CDITY N+E GFDYLRDN+ E+L+
Sbjct: 139 EWMGKLYTFLGLTVGCVINSITGEERKDAYNCDITYGTNNEFGFDYLRDNMVIYQEELLQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++AI+DEVDS+LIDE R PL+ISG+ K Y A + + L +G
Sbjct: 199 R---KLNYAIIDEVDSILIDEARTPLIISGQGDKSTDLYQKADRFVKTLTRGEQIDEKDA 255
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
+ V+ K+ V LT+ G++ AE + D EN V+ ALKA RDV
Sbjct: 256 NPTGDFVVDEKDKQVSLTDAGVSKAEAFFGVENFGDPENMEINHHVLQALKAHNIMERDV 315
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
YIV +G+ LI++E TGR+ RR+S G+HQA+EAKE + ++++S +A IT Q+ F++Y
Sbjct: 316 DYIVSDGEILIVDEFTGRLMVGRRFSNGLHQAIEAKEHVSVRSESKTMATITLQNYFRMY 375
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTAKTEE+EF ++ M V+ VPTN P R DLP + GK++ +V
Sbjct: 376 NKLSGMTGTAKTEEEEFRDIYNMDVVVVPTNKPPRREDLPDSVYLKENGKYKALADKVAE 435
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
+ G+PVLVG+ S+E SE LS LL ++G+ HNVLNA K REAE VA+AGR +TI
Sbjct: 436 VHATGQPVLVGTISIEKSELLSKLLTKKGVKHNVLNA--KQHEREAEIVAEAGRLGQVTI 493
Query: 386 STNMAGRGTDIILGGNPKMLAKK 408
+TNMAGRGTDIILGGNP+ AK+
Sbjct: 494 ATNMAGRGTDIILGGNPEFEAKR 516
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 102/178 (57%), Gaps = 11/178 (6%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V LGGL ++G+ HESRRIDNQLRGRAGRQGDPG+T+F +SL+D++ ++F +
Sbjct: 563 EHEQVVELGGLCILGSERHESRRIDNQLRGRAGRQGDPGTTQFFISLEDDLMRRFGGEMM 622
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+++SR ED P+E + + R++ Q E FGIRK ++++D V+ QR +Y
Sbjct: 623 Q--NIVSRFGLAEDEPLEANVLSRRIENAQKKVEGKNFGIRKYVLQYDNVMNKQRTIIYG 680
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW-------SLDKLLKEF 697
R+ +L G E I +V II + K P W +L+KL+ F
Sbjct: 681 ERRKVLFG--EDIRSDIMNMKDGLVAAIIGPSTMDSKFPEEWNFAEMKRNLNKLIPNF 736
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+M+E+ER +L++ +D W DH+ M++L S + +R+ G ++P EY +G F M+ A
Sbjct: 778 HMREIERVILLRVVDSLWMDHIDAMDQLKSGIGLRAIGQQDPAAEYGKEGFDMFEQMIGA 837
Query: 866 TRRLTV 871
+ TV
Sbjct: 838 IQEDTV 843
>gi|296330263|ref|ZP_06872744.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676132|ref|YP_003867804.1| translocase binding subunit (ATPase) [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152531|gb|EFG93399.1| preprotein translocase subunit SecA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414376|gb|ADM39495.1| translocase binding subunit (ATPase) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 841
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 279/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHIVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLG++VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGMTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + +LKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQSLKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R ++ +E+ + + +++ ++ I + P W LD L++
Sbjct: 614 RFEVID--SENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVE 659
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 44/68 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E ++ + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEVKFGEEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFT 758
Query: 858 FFISMLSA 865
F +M+ +
Sbjct: 759 MFENMIES 766
>gi|313884580|ref|ZP_07818341.1| preprotein translocase, SecA subunit [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620364|gb|EFR31792.1| preprotein translocase, SecA subunit [Eremococcus coleocola
ACS-139-V-Col8]
Length = 791
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 278/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI GG +LH G+IAEMKT VVTVNDYLA RD++ M
Sbjct: 82 YKVQIQGGIILHGGNIAEMKTGEGKTLTETMPVYLNALAGKGVHVVTVNDYLATRDSQEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
V+RFLGL+VGL M ++R Y CDITY+ N+ELGFDYLRDN+ A+ Q+V R
Sbjct: 142 GEVYRFLGLTVGLNLNSMNASQKREAYNCDITYSTNNELGFDYLRDNMVASQSQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA+VDEVDS+LIDE R PL+ISG+A K A Y A + L + YT++L + S
Sbjct: 200 -PLYFAVVDEVDSILIDEARTPLIISGQAGKSTALYTRADYFVKGLKEERDYTIDLTSKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ LT+EG+ AE N+L+D +N + AL+A D+ Y+V GK I++
Sbjct: 259 ISLTDEGVDKAERVFRLNNLYDVDNTALVHHIDQALRANYIMLLDIDYVVDEGKVKIVDG 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ E RR+S+G+HQA+EAKE ++I+ +S +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRIMEGRRYSDGLHQAIEAKENVEIEDESKTMATITFQNYFRMYEKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF +++ M V++VPTN P IR D + + K++ +E++ G+P+LVG+ +
Sbjct: 379 EEFREIYNMDVVQVPTNRPVIRDDASDLLYPNLKSKFKAVVEEIKERHATGQPILVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SEYLS LL+Q GIPH VLNA+ + +EAE V QAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSEYLSKLLRQAGIPHEVLNAKNHF--KEAEIVMQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 SGVKELG 503
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
GS VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ ++F +
Sbjct: 496 GSGVKELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGASQFYLSLEDDLMRRFGSERIQ 555
Query: 588 AV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A + ++ D D+ I + RQ+ Q E + RK+++E+DEV+ QR+ +Y
Sbjct: 556 AFWEKMAESDEDNDLAINSRMLSRQVESAQKRVEGNNYDTRKNVLEYDEVMREQREVIYK 615
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD---PLKHPRYWSLDKLL 694
R ++ A ES + Y++A++ I V+ + W+L+ LL
Sbjct: 616 QRLQVIQ-AEESLT----PYVKAMIKRTITRQVEIATEADKKKDWNLESLL 661
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 790 IASYLNVVQESRYDDVY--------MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRS 841
+ ++L + ES+YD+ +KE E+ V+++ +D W DH+ M+ L +V +R+
Sbjct: 687 LINFLYGLAESKYDEKIAALATPEQVKEFEKVVILRVVDSKWTDHIDMMDNLRQSVGLRA 746
Query: 842 FGHRNPLEEYKIDGCRFFISMLSA 865
+ NPL EY+ +G F M +A
Sbjct: 747 YAQTNPLTEYQTEGYERFEEMSAA 770
>gi|392415250|ref|YP_006451855.1| protein translocase subunit secA [Mycobacterium chubuense NBB4]
gi|390615026|gb|AFM16176.1| protein translocase subunit secA [Mycobacterium chubuense NBB4]
Length = 942
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 286/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HFDVQ++GGA LH G++AEMKT VVTVNDYLA+RDAE
Sbjct: 79 KHFDVQVMGGAALHFGNVAEMKTGEGKTLTCVLPAYLNALAGKGVHVVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I + P+ERR Y DITY N+E GFDYLRDN+A E V R
Sbjct: 139 WMGRVHRFLGLDVGVILSQLTPDERRVAYNADITYGTNNEFGFDYLRDNMAMRLEDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FA+VDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V++K
Sbjct: 199 G---HSFAVVDEVDSILIDEARTPLIISGPADGGSNWYTEFARLAPLMEKDVHYEVDIKK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V + E G+ E L ++L++ N P ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 256 RVVGVHEVGVEFVEDQLGIDNLYEAANSPLISYLNNALKAKELFERDKHYIVRNGEVLIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
++ TGRV RR++EG+HQA+EAKE ++I+A++ VA IT Q+ F+LY KL+GMTGTA+T
Sbjct: 316 DDFTGRVLVGRRYNEGLHQAIEAKEHVEIKAENQTVATITLQNYFRLYDKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P +R D + T K+ +V + G+PVL+G+
Sbjct: 376 EAAELHEIYKLGVVPIPTNKPMVRADQSDLIYKTEEAKFIAVVDDVTERYEKGQPVLIGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS +++ IPHNVLNA KY +EA +A+AGR A+T++TNMAGRGTDI+
Sbjct: 436 TSVERSEFLSRQFQKRRIPHNVLNA--KYHEQEAGIIAEAGRLGAVTVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + R L
Sbjct: 494 LGGNVDYLLDRRLRQRGL 511
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 171/373 (45%), Gaps = 71/373 (19%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L + + E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE
Sbjct: 528 LPAVKAQVAAEAEDVIAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLADE 587
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ ++F+ T L++R+ +D+PIE + R + Q E+ F IRK ++++DEV
Sbjct: 588 LMRRFNGATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFDIRKEVLKYDEV 645
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
+ QRK +Y R+ IL G E+ ++Q Q + V+ + G + W L+KL
Sbjct: 646 MNQQRKVIYAERRRILEG--ENLAEQSHQMLTDVITAYVDGATAE-GYSEDWDLEKLW-- 700
Query: 697 FIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS 756
E L +L + I++ D
Sbjct: 701 -------------------------EGLKQLYPVGIDHHDLLD----------------- 718
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD------DVYMKEV 810
SD + + G L RK L D LIA E + + M+++
Sbjct: 719 --------SDAVGEPG------ELTRKELLDALIADAERAYAEREKELEELAGEGAMRQL 764
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 870
ER VL+ LD WR+HL M+ L V +R P EY +G F+ ML A + +
Sbjct: 765 ERNVLLNVLDRKWREHLYEMDYLREGVGLRGLAQLRPEVEYAREGYDMFVGMLDAMKEES 824
Query: 871 VESL--VQYWSSP 881
V L VQ ++P
Sbjct: 825 VGFLFNVQVEATP 837
>gi|302566098|pdb|3IQY|A Chain A, Active Site Mutants Of B. Subtilis Seca
Length = 841
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/427 (47%), Positives = 280/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++D+VDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDQVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAG+GTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGKGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|425733668|ref|ZP_18851988.1| preprotein translocase subunit SecA [Brevibacterium casei S18]
gi|425482108|gb|EKU49265.1| preprotein translocase subunit SecA [Brevibacterium casei S18]
Length = 898
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/440 (48%), Positives = 283/440 (64%), Gaps = 30/440 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA LH G+IAEMKT ++TVNDYLA +
Sbjct: 80 MRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALTGGGVHIITVNDYLATYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV RFLG+ G IQ M +ERR Y DITY N+E GFDYLRDN+A ++E+LV
Sbjct: 140 ELMGRVFRFLGMETGCIQANMPADERRKQYAADITYGTNNEFGFDYLRDNMAWSAEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R FAIVDEVDS+LIDE R PL+ISG A D R Y AKV L Y V+
Sbjct: 200 RG---HSFAIVDEVDSILIDEARTPLIISGPAEGDANRWYEEFAKVVGRLKADRDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L +L+D EN P F+ NA++AKE +++D Y++ +G+ L
Sbjct: 257 KKRTVGVLEPGIERVEDYLGIGNLYDAENTPLISFLNNAIRAKELFKKDKDYVLLDGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGRV + RR++EG+HQA+EAKE +K+QA++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 IVDEHTGRVLKGRRYNEGLHQAIEAKEKVKVQAENQTLATITLQNYFRLYDKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN P RVD P + K++ ++ G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVPIPTNKPMQRVDQPDFVYKNEVAKFDAVVDDIVQRHETGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS L ++G+ H VLNA K AREA VA AGRK A+T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSKHLAKRGVRHEVLNA--KNHAREAAIVALAGRKGAVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLAKKIIEDRLL 415
I+LGGN + +A +E R L
Sbjct: 495 IMLGGNAEFIAVSEMEKRGL 514
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 10/164 (6%)
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLIS 593
LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F S A + I
Sbjct: 548 LGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTDDLMRLFG---SGAAERIM 604
Query: 594 RITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSIL 652
N +D+P+E + R +L Q E+ RK+++++D+VL QR +YD R+ +L
Sbjct: 605 ATANVPDDVPLESKMVTRAILSAQTQIEQRNAEQRKNVLKYDDVLNRQRTVIYDERRKVL 664
Query: 653 TGANESCSQQIFQYMQAVVDEII-FGNVDPLKHPRYWSLDKLLK 695
G E + Q+ + + V+D + P++ W +D+L +
Sbjct: 665 DG--EDLADQVASFREQVIDAYVQAATTGPVEE---WKVDELFE 703
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+E+ER V++ +D WR+HL M+ L + + +R+ R+PL EY+ +G F +M
Sbjct: 758 RELERRVVLSVIDRRWREHLYEMDYLKNGIGLRAMAQRDPLVEYQREGFEMFTTM 812
>gi|306835493|ref|ZP_07468509.1| preprotein translocase subunit SecA [Corynebacterium accolens ATCC
49726]
gi|304568623|gb|EFM44172.1| preprotein translocase subunit SecA [Corynebacterium accolens ATCC
49726]
Length = 861
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/479 (44%), Positives = 299/479 (62%), Gaps = 34/479 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYPVQIMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALEGQGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGLSVG+I M P+ER+ Y CDITY N+ELGFDYLRDN+ +V R
Sbjct: 140 MMGRVHRWLGLSVGVILSEMRPQERKEAYDCDITYGTNNELGFDYLRDNMVRTLNDVVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F IVDEVDS+LIDE R PL+ISG Y V A++A + +G+HY V+ K
Sbjct: 200 G---HNFCIVDEVDSILIDEARTPLIISGPVDGSSQFYGVFAQLAPRMREGIHYEVDHKK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NALKAKE + RD YIVRNG+ +I+
Sbjct: 257 RTIGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNALKAKELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKEQVEIKNENQTLATVTLQNFFRLYEKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++ + V+ +PTN PN R D + + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELHSIYGLDVVPIPTNKPNQRTDHSDRIYKTQEAKFAAVVDDIAEHVEHGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ HNVLNA K+ E + +A+AGR +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLTKRGVQHNVLNA--KHHEEEGQIIARAGRPGTVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEVDDKTSSPKVLSEIKLGSSSLALLA 451
LGGNP+++ + + +R L +EA E+D + K L + S L +L
Sbjct: 495 LGGNPEVILDEKLRERGLDPFEDEEKYQEAWEAEIDGEKERSKRLGDEVRESGGLYVLG 553
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 11/181 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV+ GGL+V+GT HESRRIDNQLRGR GRQGDPG TRF +S++DE+ +F +
Sbjct: 540 GDEVRESGGLYVLGTERHESRRIDNQLRGRTGRQGDPGETRFYLSMRDELMVRFVGQS-- 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 598 MEHMMNRLNVPDDVPIEAKMVSNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYST 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKI 704
R SIL + I ++ ++D+ + V Y W+L++L A+ G
Sbjct: 658 RYSILD------ADDIKDDIRTMIDDTVSAYVAGATATGYVEDWNLEELWNALEALYGPT 711
Query: 705 L 705
+
Sbjct: 712 M 712
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D M+ ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 759 DKQMRNTERMVILPIIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMN 818
Query: 864 SATRRLTVESL 874
+ TV L
Sbjct: 819 EGVKEETVRQL 829
>gi|336113349|ref|YP_004568116.1| preprotein translocase subunit SecA [Bacillus coagulans 2-6]
gi|335366779|gb|AEH52730.1| preprotein translocase, SecA subunit [Bacillus coagulans 2-6]
Length = 838
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 280/420 (66%), Gaps = 29/420 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQ++GG LH+G+IAEMKT VVTVN+YLA+RDAE M
Sbjct: 82 YHVQLMGGITLHEGNIAEMKTGEGKTLTATMPVYLNALSGKGVHVVTVNEYLAKRDAEEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++FLGL+VGL M EE+++ Y DITY N+E GFDYLRDN+ EQ V R
Sbjct: 142 GELYKFLGLTVGLNLTNMSNEEKQAAYAADITYGTNNEFGFDYLRDNMVLYHEQKVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA++DEVDS+LIDE R PL+ISG+A K A Y A L + YT ++K S
Sbjct: 200 -PLYFAVIDEVDSILIDEARTPLIISGQAEKSTALYTQANAFVRTLEKEKDYTYDVKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V LTEEGI AE ++L+D N + ALKA RDV Y+V++G+ +I+++
Sbjct: 259 VLLTEEGITKAEKYFHIDNLYDLRNVTINHHINQALKANVAMHRDVDYVVQDGEIIIVDQ 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRLMKGRRFSEGLHQAIEAKEGVEIQNESMTMATITFQNYFRMYAKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ ++++ LG+PVLVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPIIRDDRPDLIYKTMEGKFRAVVEDIKQRHDLGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE +S +LK++G+PHNVLNA K AREAE + QAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELISQMLKKRGVPHNVLNA--KNHAREAEIIKQAGQKGAVTIATNMAGRGTDIKLG 496
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GEGVVELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNMK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 S--MMERLGMDDTQPIQSKMVSRAVESAQKRVEGNNFDARKQLLQYDDVLRQQREIIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +LT N + + + +++VV+ ++ N + W+L ++
Sbjct: 614 RDEVLTADN--LREIVEKMIRSVVERVVNANAPLHEDEEEWNLQGIV 658
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E E+ +L++++D W DH+ M+ L +++R++G +PL EY+ +G F +M+++
Sbjct: 708 MREFEKVILLRSVDSKWIDHIDAMDHLREGIHLRAYGQIDPLREYQSEGFAMFENMVASI 767
Query: 867 RRLTVESLVQY-WSSPMESQEL 887
T + +++ + +E QE+
Sbjct: 768 EEDTAKYIMKAEIQTNLERQEV 789
>gi|255323818|ref|ZP_05364944.1| preprotein translocase, SecA subunit [Corynebacterium
tuberculostearicum SK141]
gi|311739818|ref|ZP_07713652.1| preprotein translocase subunit SecA [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255298998|gb|EET78289.1| preprotein translocase, SecA subunit [Corynebacterium
tuberculostearicum SK141]
gi|311304891|gb|EFQ80960.1| preprotein translocase subunit SecA [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 861
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/467 (44%), Positives = 296/467 (63%), Gaps = 34/467 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYRVQIMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALDGKGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGLSVG+I M P ER++ Y CDITY N+ELGFDYLRDN+ + +V R
Sbjct: 140 MMGRVHRWLGLSVGVILSEMRPPERKAAYDCDITYGTNNELGFDYLRDNMVRSLNDVVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+F IVDEVDS+LIDE R PL+ISG Y V A++A + +G+HY V+ K
Sbjct: 200 G---HNFCIVDEVDSILIDEARTPLIISGPVDGSSQFYSVFAQLAPRMREGIHYEVDHKK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NALKAKE + RD YIVRNG+ +I+
Sbjct: 257 RTIGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNALKAKELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKEQVEIKNENQTLATVTLQNYFRLYEKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++ + V+ +PTN PN R D + + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELHSIYDLDVVPIPTNKPNQRADHSDRIYKTQEAKFAAVVDDIAEHVESGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++GI HNVLNA K+ E + +A+AGR +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLSKRGIKHNVLNA--KHHEEEGQIIARAGRPGTVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEVDDKTSSPKVLSE 439
LGGNP+++ + + +R L +EA E+D + K L +
Sbjct: 495 LGGNPEVILDEKLRERGLDPFEDEEKYQEAWEAEIDSERERSKKLGD 541
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 163/360 (45%), Gaps = 83/360 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G +V+ GGL+V+GT HESRRIDNQLRGR GRQGDPG TRF +S++DE+ +F +
Sbjct: 540 GDQVREAGGLYVLGTERHESRRIDNQLRGRTGRQGDPGETRFYLSMRDELMVRFVGQS-- 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 598 MENMMNRLNVPDDVPIEAKMVSNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYAT 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R IL + I N I G I D
Sbjct: 658 RHDILDAGD------------------IQDN---------------------IRGMIDDT 678
Query: 708 LFAGISGDTLLKSIEELPELNSI--DINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
+ A ++G T +E+ +L+++ +++ Y P I
Sbjct: 679 VSAYVAGATATGYVEDW-DLDALWNALDSLYGP-----------------------TISH 714
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-----------YMKEVERAV 814
++L + Y + L + L D L+ N YD + M+ ER V
Sbjct: 715 EELVEGSEYGSPGELSAEQLRDALVQDANN-----EYDKLEESVTAIGGEQQMRNTERMV 769
Query: 815 LVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M + TV L
Sbjct: 770 ILPIIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGEMFNAMNDGVKEETVRQL 829
>gi|296394605|ref|YP_003659489.1| preprotein translocase subunit SecA [Segniliparus rotundus DSM
44985]
gi|296181752|gb|ADG98658.1| preprotein translocase, SecA subunit [Segniliparus rotundus DSM
44985]
Length = 921
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 287/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G+IAEMKT VVT NDYLA+RDAE
Sbjct: 84 RHYDVQVMGGAALHYGNIAEMKTGEGKTLTSVLPVYLNALSGDGVHVVTTNDYLAKRDAE 143
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGLSVG I G RR Y+ DITY N+E GFDYLRDN+A N LV R
Sbjct: 144 WMGRVHRFLGLSVGAILAGGGSARRREAYQADITYGTNNEFGFDYLRDNMAHNVNDLVQR 203
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDEVDS+LIDE R PL+ISG A Y A++ E + + +HY V+L+
Sbjct: 204 G---HAFAIVDEVDSILIDEARTPLIISGPADSSSKWYIEFARIVERMKKDVHYEVDLRK 260
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V ++E G++ E L +L++ N ++ NA+KAKE + RD Y+V++G+ LI+
Sbjct: 261 RTVGVSEAGVSFVEDQLGIGNLYEAANSALVSYLNNAVKAKELFVRDKDYLVQSGEVLIV 320
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++++A++ A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 321 DEHTGRLLVGRRYNEGLHQAIEAKENVEVKAENQTFATITLQNYFRLYDKLAGMTGTART 380
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF +++++ V+ +PTN IR D + T K++ +V + G+PVL+G+
Sbjct: 381 EASEFQQIYKLGVVSIPTNRSMIRTDQADLIYRTQDAKFDAVVADVAERHKKGQPVLIGT 440
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS LLK+ +PH VLNA KY +EA +A+AGR A+T++TNMAGRGTDI+
Sbjct: 441 TSVERSEHLSRLLKKSNVPHTVLNA--KYHEQEAAIIARAGRLGAVTVATNMAGRGTDIV 498
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN ++A + + ++ L
Sbjct: 499 LGGNVDVIADEHLREQGL 516
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +SL DE+ ++F+ ++ R
Sbjct: 551 GGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLGDELMRRFN---QGILEFALR 607
Query: 595 ITND-EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
+D+P+E + R + Q E+ F RK+++++D+V+ QRK +Y R+ IL
Sbjct: 608 SGGQPDDVPLEHKLVTRAIKTAQTDIEQMNFESRKNVLKYDDVMNEQRKVIYAERRRILE 667
Query: 654 GANESCSQQIFQYMQAVVDEIIFG 677
G E +Q+ + V + G
Sbjct: 668 G--EDLGEQVQHMITDTVTAYVNG 689
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M ++ER ++++ LD WR+HL M+ L + +R+ R+PL EY+ +G F ML
Sbjct: 766 MAQLERMIMLQVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFTGMLDGL 825
Query: 867 RRLTV 871
+ V
Sbjct: 826 KEEVV 830
>gi|398305007|ref|ZP_10508593.1| preprotein translocase subunit SecA [Bacillus vallismortis DV1-F-3]
Length = 841
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/427 (47%), Positives = 279/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHIVTVNEYLASRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSLSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTFDIKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + +LKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQSLKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K AITI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAITIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R ++ +E+ + + +++ ++ I + P W LD L++
Sbjct: 614 RFEVID--SENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVE 659
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEEDFGEEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F +M+ +
Sbjct: 759 MFENMIES 766
>gi|223982760|ref|ZP_03632988.1| hypothetical protein HOLDEFILI_00262 [Holdemania filiformis DSM
12042]
gi|223965260|gb|EEF69544.1| hypothetical protein HOLDEFILI_00262 [Holdemania filiformis DSM
12042]
Length = 782
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/418 (47%), Positives = 277/418 (66%), Gaps = 29/418 (6%)
Query: 6 VQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWMER 42
VQ++GG VLH G IAEMKT VVTVN+YLA RDA+WM +
Sbjct: 84 VQLMGGIVLHGGDIAEMKTGEGKTLTSVLPVYLNALDGRGVHVVTVNEYLAGRDADWMGQ 143
Query: 43 VHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKP 102
+HRFLGL+VGL R + P ++R+ Y CDITYT N+E+GFDYLRDN+ E V+R P
Sbjct: 144 IHRFLGLTVGLNLRQLTPAQKRAAYNCDITYTTNAEVGFDYLRDNMVTRVEDRVLR---P 200
Query: 103 FHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVE 162
+FA+VDEVDS+L+DE R PL+ISG + Y A + + L Y +++K+ +V+
Sbjct: 201 LNFALVDEVDSILVDESRTPLIISGGQKQTANLYLQADRFVKSLKADEDYEIDVKSKTVQ 260
Query: 163 LTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELT 221
LT+ G+ AE A +L++ ++ + ALKA +DV+Y+V N + +I+++ T
Sbjct: 261 LTDSGVTKAEKAFRVKNLYELDHTQLVHHISQALKANYIMMKDVEYVVDNDEIVIVDQFT 320
Query: 222 GRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKE 281
GR+ + R +S+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F+LY KL+GMTGTAKTEE+E
Sbjct: 321 GRLMKGRAYSDGLHQAIEAKEGVSIKQETTTLATITYQNFFRLYNKLAGMTGTAKTEEEE 380
Query: 282 FLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVE 341
FL ++ M V+E+PTN P R+D P F T + K+E EV G+PVLVG+ +VE
Sbjct: 381 FLSIYNMRVMEIPTNRPVARIDYPDAIFGTKKAKFEALVNEVRECHEKGQPVLVGTIAVE 440
Query: 342 NSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
SE+++ +LK Q IPH VLNA K AREAE + +AG+K ++TI+TNMAGRGTDI LG
Sbjct: 441 TSEFIAKMLKDQKIPHEVLNA--KNHAREAEIIKKAGQKGSVTIATNMAGRGTDIKLG 496
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 82/125 (65%), Gaps = 5/125 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIG+ HESRRIDNQLRGR+GRQGDPG +RF VS+QD++ +F +
Sbjct: 496 GEGVRELGGLAVIGSERHESRRIDNQLRGRSGRQGDPGYSRFYVSVQDDLMVRFGSEKME 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ L S++ D+PIE + + + Q E F +RK+L+E+D+VL QR+ +Y+
Sbjct: 556 S--LFSQLG---DVPIESKVVTKSIGSAQKRVEGVNFDVRKTLLEYDDVLRQQREIIYEQ 610
Query: 648 RQSIL 652
R IL
Sbjct: 611 RNFIL 615
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%)
Query: 805 VYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
V++ +E+ +++K +D W DH+ M++L +++RS+ NPL+ Y +G + F M++
Sbjct: 701 VHVLPIEKTMVLKVIDRNWVDHIDTMSKLRDGIHLRSYAQSNPLQAYVSEGYQLFEDMMA 760
>gi|400291516|ref|ZP_10793524.1| SecA cross-linking domain protein, partial [Actinomyces naeslundii
str. Howell 279]
gi|399903391|gb|EJN86138.1| SecA cross-linking domain protein, partial [Actinomyces naeslundii
str. Howell 279]
Length = 501
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/428 (49%), Positives = 278/428 (64%), Gaps = 32/428 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A + LV
Sbjct: 139 DLMGRVHRFLGLTTGCILVGQTPAERREQYACDITYGTNNEFGFDYLRDNMAQRPDDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG A+ DV + Y A ++E L +G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPATGDVNKWYKEFATISERLREGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 256 KKRTVGVLASGIERVEDYLGVDNLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D + T K + ++ +G+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIREDQSDLVYTTVEAKLDAVVDDIAERHEVGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L+++GIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSETLSERLRERGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGN 401
TDI+LGGN
Sbjct: 494 TDIMLGGN 501
>gi|373487062|ref|ZP_09577732.1| protein translocase subunit secA [Holophaga foetida DSM 6591]
gi|372010529|gb|EHP11136.1| protein translocase subunit secA [Holophaga foetida DSM 6591]
Length = 881
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 293/437 (67%), Gaps = 35/437 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G ++EM+T +VTVNDYLA+RDA
Sbjct: 81 MRHFDVQLVGGMVLHEGKVSEMRTGEGKTLTATLPLYLNALSGRGAHLVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ +LGLSVG+IQ G+ EERR Y DITY N+ELGFDYLRDN+ + E
Sbjct: 141 EWMGRLYNWLGLSVGIIQHGLSDEERREAYGSDITYCTNNELGFDYLRDNMKWSLEDFTQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F FAIVDEVDS+LIDE R PL+I+G + +D ++Y + L + Y V+ K
Sbjct: 201 RG---FAFAIVDEVDSILIDEARTPLIIAGSSEEDTSKYYRIDSMVPKLKVDVDYKVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVR---NGK 213
+ V LT++GI AE L +L+D + +N AL A Y+ DV Y+VR +G+
Sbjct: 258 DRQVMLTDDGIRQAEQLLGVANLYDPSAIDTLHGLNQALLAHNLYKLDVDYMVRPKEDGR 317
Query: 214 A---LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+I++E TGR+ RRWS G+HQA+EAKEG+++ A++ +A +T+Q+ F++Y KL G
Sbjct: 318 GQEIVIVDEFTGRMMPGRRWSNGLHQAIEAKEGVEVNAENQTLATVTFQNFFRMYEKLGG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA+TE +E L+++++ V+ +PTN P +R D ++T +GK + +E++ + G
Sbjct: 378 MTGTAETEARELLQIYKLEVVIIPTNKPMVRKDFADVVYSTKKGKVKAIVEEIKELHTKG 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+P+LVG+ S+E+SE+L++ LK+ +PH VLNA K+ +EAE +AQAGRK A+TI+TNMA
Sbjct: 438 QPILVGTASIESSEFLAEELKRAKVPHVVLNA--KHHEKEAEIIAQAGRKGAVTIATNMA 495
Query: 391 GRGTDIILGGNPKMLAK 407
GRGTDI+LGGNP+ LA+
Sbjct: 496 GRGTDILLGGNPEGLAR 512
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV GGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F D
Sbjct: 547 EKQEVIAAGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRIFGGDR- 605
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+++S + +++ PIE + R + Q E + F IR+ L+++D+V+ QR Y+
Sbjct: 606 -IKNMMSTLGMNDEEPIEAGMVTRAIERSQKRVETHNFEIREHLLKYDDVMNKQRIFFYN 664
Query: 647 LRQSILTG---------ANESCSQQIFQYM 667
LR IL G A E C + Y+
Sbjct: 665 LRCDILKGNTKEYVLRIAGEVCEGLVHDYL 694
>gi|365828461|ref|ZP_09370274.1| translocase subunit secA, partial [Actinomyces sp. oral taxon 849
str. F0330]
gi|365263290|gb|EHM93132.1| translocase subunit secA, partial [Actinomyces sp. oral taxon 849
str. F0330]
Length = 866
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/433 (49%), Positives = 279/433 (64%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPYHVQIMGGAALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 DLMGRVHRFLGLTTGCILVGQTPAERREQYACDITYGTNNEFGFDYLRDNMAQRPEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG A+ DV + Y A ++E L +G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPATGDVNKWYKEFATISERLREGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L +L++ EN P F+ NA+KAKE + RD YIVR+G+ L
Sbjct: 256 KKRTVGVLSSGIERVEDYLGVENLYESENTPLIGFLNNAIKAKELFHRDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKERVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D + T K + ++ G+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIREDQSDLVYTTVEAKLDAVVDDIAERHEAGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS+ L+++GIPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEILSERLRERGIPHEVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 165/375 (44%), Gaps = 84/375 (22%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
LS K+ C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+
Sbjct: 532 LSAAKEA---CRAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSM 588
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+D++ + F+ + A ++S +D+P+E + R + G Q E + IRK+++++
Sbjct: 589 EDDLMRMFA--SGLAQRIMSSGAYPDDVPLESKMVTRGIAGAQRQVESRNYEIRKNVLKY 646
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
D+V+ QR+ VY R+ +L G + + F+ QAV + G + P W LD L
Sbjct: 647 DDVMTEQREKVYSERRRVLDGEDLEPQIEAFR-TQAVTSIVNAGTAE--GRPDEWDLDAL 703
Query: 694 LKEF--IAIAGKILDDLFAGISGDTLL---KSIEELPE---------LNSIDINNFYFPD 739
E + G D++ + G L + I+EL E ID N
Sbjct: 704 WGELGRLYPVGLTQDEVVEALGGKDALTPERLIDELSEDVAVAYEDAEARIDANTLAHAQ 763
Query: 740 LPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQE 799
L + P R + R+ IL+A +E
Sbjct: 764 LGEEP--MRTLERR----------------------------------ILLAVVDKRWRE 787
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
Y+ Y+KE + +R+ R+PL EY +G R F
Sbjct: 788 HLYEMDYLKE--------------------------GIGLRAMAQRDPLVEYANEGARMF 821
Query: 860 ISMLSATRRLTVESL 874
+M+ R TVE +
Sbjct: 822 RAMMEGIREETVEQI 836
>gi|227832507|ref|YP_002834214.1| preprotein translocase subunit SecA [Corynebacterium aurimucosum
ATCC 700975]
gi|262183627|ref|ZP_06043048.1| preprotein translocase subunit SecA [Corynebacterium aurimucosum
ATCC 700975]
gi|227453523|gb|ACP32276.1| preprotein translocase SecA subunit [Corynebacterium aurimucosum
ATCC 700975]
Length = 850
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/467 (44%), Positives = 296/467 (63%), Gaps = 34/467 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYKVQVMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALEGKGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGL+VG+I M P ER+ Y CDITY N+ELGFDYLRDN+ + V R
Sbjct: 140 MMGRVHRWLGLTVGVILSEMRPAERKEAYACDITYGTNNELGFDYLRDNMVRSLNDTVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++ IVDEVDS+LIDE R PL+ISG Y V +K+A + +G+HY V+ K
Sbjct: 200 G---HNYCIVDEVDSILIDEARTPLIISGPVDGSSQFYGVFSKLAPKMREGIHYEVDHKK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L +L+ E+ ++ NALKAKE + RD YIVRNG+ LI+
Sbjct: 257 RTIGVLEEGVEFVEDQLGIENLYAPEHSQLVSYLNNALKAKELFTRDKDYIVRNGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DSFTGRVLAGRRYNEGMHQAIEAKEEVEIKNENQTLATVTLQNYFRLYDKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++ + V+ +PTN PN R D + + T K+ ++E G+PVLVG+
Sbjct: 377 EAAELHSIYGLDVVPIPTNKPNQRTDHSDRIYKTQEAKFAAVVDDIEEHVADGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++GI H+VLNA K+ E + VA+AGR A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLSKRGIKHSVLNA--KHHEEEGQIVARAGRPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEVDDKTSSPKVLSE 439
LGGNP+++ + + +R L +EA + E+D + K L +
Sbjct: 495 LGGNPEVILDEKLRERGLDPFEDEEKYQEAWDTEIDQERERSKRLGD 541
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG TRF +S++DE+ +F +
Sbjct: 540 GDEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGETRFYLSMRDELMVRFVGQS-- 597
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 598 MENMMNRLNVPDDVPIEAKMVSNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYAT 657
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKIL 705
R IL ++ I + + V + G + W+LD+L ++ G +
Sbjct: 658 RHDILEASD--IKDNIREMINDTVSAYVAG-ATATGYVEDWNLDELWNALESLYGPTM 712
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ ER +++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M A
Sbjct: 762 MRNTERMIILPIIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMNDAV 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|429736428|ref|ZP_19270326.1| preprotein translocase, SecA subunit [Selenomonas sp. oral taxon
138 str. F0429]
gi|429155107|gb|EKX97807.1| preprotein translocase, SecA subunit [Selenomonas sp. oral taxon
138 str. F0429]
Length = 883
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALAGKGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSEGQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 203 R---PLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+V+ + +I
Sbjct: 260 QKTVAPADSAVPKIEKIVGITNLYAPENIELSHCFTAALRAKALMHRDRDYVVKGDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++ +PVI +PTN P R+D + T K+ + V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYNLPVIVIPTNKPIQRIDEADVIYKTKAAKYRAVGRAVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S++LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSNVLKRNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 119/202 (58%), Gaps = 7/202 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEALGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDRLGMEEDEPIEHAIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I ++ ++ + + + +P W LD L+++ A G++
Sbjct: 618 RKKILLG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIEDAEKVYAPKGRL 675
Query: 705 LDDLFAGISGDTLLKSIEELPE 726
++ D + + +E++ E
Sbjct: 676 KKAELEALARDEIQEELEKVAE 697
>gi|374308691|ref|YP_005055122.1| hypothetical protein [Filifactor alocis ATCC 35896]
gi|320120581|gb|ADW16185.1| hypothetical protein HMPREF0389_01740 [Filifactor alocis ATCC
35896]
Length = 914
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/432 (47%), Positives = 277/432 (64%), Gaps = 29/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VL++G IAEMKT V+TVNDYLA+RD
Sbjct: 76 MRHYDVQMMGGIVLNEGRIAEMKTGEGKTLVATAPVYLNALTGKGVHVITVNDYLAKRDM 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FL LS G+I G+ +RR+ Y DITY N+E GFDYLRDN+ ++V
Sbjct: 136 EWMSKLYNFLDLSTGVIVHGLNNTQRRAAYNADITYGTNNEFGFDYLRDNMVIYKHEMVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+L+DE R PL+ISG+ K + Y A + L + Y V K
Sbjct: 196 R---PLNYAIVDEVDSILVDEARTPLIISGQGDKSTSLYTQADTFIKTLHEEEDYIVNEK 252
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N+ LTE G+ AE + D N + AL+A R DV Y+VR+G+ +I
Sbjct: 253 ENASTLTEIGLQKAERFFGVESMTDIANMEIYHNIGQALRANTLMRLDVDYVVRDGEIVI 312
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S G+HQA+EAKEGLKIQ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 313 VDEFTGRLMFGRRYSAGLHQAIEAKEGLKIQRESKTLATITFQNYFRMYQKLSGMTGTAK 372
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V+++PTN P +R DL + T K+ +EV G+P+LVG
Sbjct: 373 TEEEEFRSIYNMDVVQIPTNRPIVRQDLNDVVYKTEEAKFNAVVEEVARKHETGQPLLVG 432
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE LS+ LK++GI H VLNA K +EAE VAQAGR ++TI+TNMAGRGTDI
Sbjct: 433 TISIENSEKLSEKLKRRGIKHEVLNA--KNHEKEAEIVAQAGRFNSVTIATNMAGRGTDI 490
Query: 397 ILGGNPKMLAKK 408
ILGGNP +A K
Sbjct: 491 ILGGNPDFMANK 502
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 185/377 (49%), Gaps = 70/377 (18%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
TY +LK+ + E +V +GGL +IGT HESRRIDNQLRGR+GRQGDPG T+F +
Sbjct: 534 TYQRILKEKKEELREEQEKVAEVGGLGIIGTERHESRRIDNQLRGRSGRQGDPGDTKFFI 593
Query: 572 SLQDEMFQKFSFDTSWAVDLISRI-TNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSL 630
SL+D++ +KF + +L+ R D+D PIE + +++ G Q E FGIRKS+
Sbjct: 594 SLEDDLMRKFGGEK--MSELMDRFGIMDDDEPIEAKVLTKRIEGAQKKVEGINFGIRKSV 651
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+E+D+V+ VQR+ +Y R+ +L G E+ + +I ++A VD II + ++ W
Sbjct: 652 LEYDDVMNVQREIIYKERRRVLEG--ENITDEIQNMIRATVDSIIMQYMPANEYEEEWD- 708
Query: 691 DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGI 750
L LFA +S + I +N PD
Sbjct: 709 --------------LHGLFAKLS------------VVCGIHLN----PD----------- 727
Query: 751 RRKSSSLKRWLAICSDDLTKNGRYRATTNL-LRKYLGDILIASYLNVVQESRYDDVYMKE 809
A ++L K+ T L L++Y QES+ + +E
Sbjct: 728 -----------AYSKENLDKDAFIDQITTLALKRYHE-----------QESQIPEEQFRE 765
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ER +L++ +D W DH+ M++L + +R+ G NP+ Y+++G F +M S +
Sbjct: 766 LERVILLQAVDSRWMDHIDAMDQLRQGIGLRALGQENPVRAYQMEGFDMFDAMNSLIQED 825
Query: 870 TVESLVQYWSSPMESQE 886
TV ++ + E QE
Sbjct: 826 TVRYVLNVTLTKKEEQE 842
>gi|383755048|ref|YP_005433951.1| putative protein translocase subunit SecA [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381367100|dbj|BAL83928.1| putative protein translocase subunit SecA [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 868
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/429 (48%), Positives = 280/429 (65%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T V+TVNDYLA+RD
Sbjct: 80 MRHFDVQMIGGMCLHEGRIAEMRTGEGKTLVATLPVYLNALTGKGVHVITVNDYLARRDM 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++RFLGL+VGL+ M ER+ Y CD+T+ N+E GFDYLRDN+ +Q+V
Sbjct: 140 EEMGRLYRFLGLTVGLVVHDMDFPERKYAYSCDVTFGTNNEFGFDYLRDNMVIYPDQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG +K Y A+ L +G YTV+ K
Sbjct: 200 R---ELNFAIVDEVDSILIDEARTPLIISGPGAKSTDMYATMARAVATLKEGDDYTVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E L ++L+ EN + AL+AK +RD Y+VR+ + +I
Sbjct: 257 QKTVAPADSVVPKIEKMLGISNLYAPENIELSHCFTAALRAKALMKRDRDYVVRDDEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLATITFQNYFRMYNKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++ +PVI VPTN P RVD P + K+ + V+ + G+PVL+G
Sbjct: 377 TEEDEFLKIYNLPVIVVPTNKPVQRVDYPDLIYKNKAAKYRAVGKFVKELHEKGQPVLIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LS +LK+ GIPH+VLNA K+ +EAE +A AG+K A+TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEELSSVLKKNGIPHSVLNA--KFHEKEAEIIADAGQKGAVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 495 KLGEGVPEL 503
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 114/199 (57%), Gaps = 7/199 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGR+GRQGDPG++RF +SL+D++ + F+ D
Sbjct: 497 GEGVPELGGLFIVGTERHESRRIDNQLRGRSGRQGDPGASRFFLSLEDDLLRLFASDRIA 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ +ED PIE I + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 G--MMDKLGMEEDEPIEHRIITNSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVMYGE 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE---FIAIAGKI 704
R+ IL G E+ + I + ++ + + + +P W LD L+++ A AG +
Sbjct: 615 RRKILLG--ENLRENIMGMVNHIIKDEMNQYANEQLYPEEWQLDGLIEDAEKIYAPAGLL 672
Query: 705 LDDLFAGISGDTLLKSIEE 723
+ +S D L + +E+
Sbjct: 673 KKEELVELSRDELKERLEK 691
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E+E+ V+++ +D W +HL +M+ L +N+R++G RNPL EYKI+ F M SA
Sbjct: 709 MRELEKVVMLRVVDSKWMEHLDHMDMLRDGINLRAYGQRNPLVEYKIEALDMFEEMESA 767
>gi|108804457|ref|YP_644394.1| protein translocase subunit secA [Rubrobacter xylanophilus DSM
9941]
gi|123069073|sp|Q1AVJ6.1|SECA_RUBXD RecName: Full=Protein translocase subunit SecA
gi|108765700|gb|ABG04582.1| protein translocase subunit secA [Rubrobacter xylanophilus DSM
9941]
Length = 902
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 275/422 (65%), Gaps = 29/422 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+R FDVQ++GG VLH G IAEMKT VVTVNDYLA+RDA
Sbjct: 79 LRPFDVQVMGGVVLHQGKIAEMKTGEGKTLVATMPVYLNALAGRGVHVVTVNDYLARRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGL VG+IQ M EER+ Y DITY N++ GFDYLRDN+A + +QLV
Sbjct: 139 EWMGPIYEFLGLEVGVIQESMGFEERKKAYAADITYGTNAQFGFDYLRDNIATSPDQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG Y A + L +G Y V+ K
Sbjct: 199 R---ELHYAIVDEVDSILIDEARTPLIISGLPESAADLYYRFAAIVPRLREGEDYEVDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V TE+G+A E AL +L+D N ++ AL+A +RRD +YIVR+G+ I
Sbjct: 256 KRQVAPTEQGVAKVEKALGIPNLYDGVNTNLVNHLIQALRAHTLFRRDREYIVRDGQVFI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV E RR+SEG+HQA+EAKEG++I+ ++ VA IT Q+ F+ Y KL+GMTGTA
Sbjct: 316 VDEFTGRVLEGRRYSEGLHQAIEAKEGVEIKEENQTVATITIQNYFRQYEKLAGMTGTAA 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF+ ++M V+ +PT+ P IRVD + T + K+ ++ R G+PVLVG
Sbjct: 376 TEADEFMHTYKMEVVSIPTHRPMIRVDRDDLVYRTKKAKYAAVIDDIVERHRKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SVE SE+LS LLK++GI HNVLNA K+ REAE +A+AG+K A+TI+TNMAGRGTDI
Sbjct: 436 TVSVEVSEHLSALLKRRGIKHNVLNA--KHHEREAEIIAEAGKKGAVTIATNMAGRGTDI 493
Query: 397 IL 398
L
Sbjct: 494 KL 495
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 104/193 (53%), Gaps = 6/193 (3%)
Query: 505 LGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDP 564
L + Y ++ +D S E EV LGGL+V+GT HE+RRIDNQLRGR+GRQGDP
Sbjct: 514 LASEIMEKYPTITRDMLEGRSLESLEVVNLGGLYVLGTERHEARRIDNQLRGRSGRQGDP 573
Query: 565 GSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYF 624
G +RF +S +D++ + F + L+ RI +ED IE + + Q E F
Sbjct: 574 GESRFYLSFEDDLLRLFGGQRMQS--LMERIGLEEDEAIEAGMVSNSVRRAQEQVESRNF 631
Query: 625 GIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
+RK ++E+D+VL QR+ +Y +R+ IL G Y++ V+ ++I +
Sbjct: 632 QMRKRILEYDDVLNKQREVIYAIRREILMGEKVDT----MSYVEDVLTDVISRYASEDVY 687
Query: 685 PRYWSLDKLLKEF 697
P W L+ L E
Sbjct: 688 PEEWDLEGLATEL 700
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+E ER L+ +D WR+HL M L + R G R+PL EYK +G F+ M
Sbjct: 763 FEEAERRTLLSVVDSRWREHLYEMEYLREGIGWRGLGQRDPLVEYKREGYDLFVEMERGI 822
Query: 867 R 867
R
Sbjct: 823 R 823
>gi|189485370|ref|YP_001956311.1| protein translocase subunit SecA [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|259509951|sp|B1H018.1|SECA_UNCTG RecName: Full=Protein translocase subunit SecA
gi|170287329|dbj|BAG13850.1| protein translocase subunit SecA [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 860
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 284/444 (63%), Gaps = 49/444 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG +LH G IAEMKT +VTVNDYLA+RD
Sbjct: 81 LRHFDVQLIGGYILHKGKIAEMKTGEGKTLVATLAAYLNALPQTGVHIVTVNDYLAKRDK 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+ LGL+VG + EERR Y CDITY N+E+GFDYLRDN+ + V+
Sbjct: 141 EWMGVVYEKLGLTVGNVGNETKNEERRMAYNCDITYITNNEIGFDYLRDNMVIAKDDRVL 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA------------------ 139
R P ++AI+DEVDS+LIDE R PL+ISG ++ +Y ++
Sbjct: 201 R---PLNYAIIDEVDSILIDEARTPLIISGACAESTDKYYISDRIVPRLKGRIITENEEI 257
Query: 140 -AKVAEL-LVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALK 196
AK A++ L +G Y ++ KN+S LTE+G+ AE L +++D+ W + A+K
Sbjct: 258 KAKYADVDLAKGYDYLIDEKNHSAVLTEQGVQKAEKMLGVKNIYDDLQSEWVHHLTQAIK 317
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A YRRD++Y+V++GK +I++E TGR+ RRWS+G+HQ++E KE LKI ++ +A I
Sbjct: 318 AHNLYRRDIEYVVKDGKVIIVDEFTGRLMPGRRWSDGLHQSIEVKENLKIADENQTLATI 377
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y K++GMTGTA TE +EF +++++ VIEVPTN P IR D + T R K
Sbjct: 378 TFQNFFRMYKKIAGMTGTATTESEEFWEIYKLGVIEVPTNNPMIRKDYHDVIYRTEREKD 437
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
E+ES+++ G+PVLVG+ S+E SE +S +L+ +GIPH VLNA KY EA+ +A
Sbjct: 438 NAVVNEIESLWKKGQPVLVGTRSIEKSEKISTMLRIKGIPHQVLNA--KYHELEAQIIAG 495
Query: 377 AGRKYAITISTNMAGRGTDIILGG 400
AG K A+TI+TNMAGRGTDI+LG
Sbjct: 496 AGTKSAVTIATNMAGRGTDILLGA 519
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
+ EVK+ GGLH+IGT HESRRIDNQLRGR+GRQGDPGS++F +S++DE+ + F D
Sbjct: 524 QNEEVKKSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSKFFLSMEDELMRLFGSDKM 583
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ + ++ E+ I+ I + + Q E F IRK L++FD V+ QR+ VY
Sbjct: 584 SVI--MQKLGLKENEDIQHLWISKAVENAQKKVEGMNFDIRKRLIDFDNVMNKQREAVYK 641
Query: 647 LRQSILTGAN 656
LR IL G +
Sbjct: 642 LRNEILEGQD 651
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M ++R VL++ +D WRDHL +++L + R++ ++P EY+ + F SM++
Sbjct: 737 MLNMQRIVLLQMIDSSWRDHLYELDQLRHDIGFRAYAQKDPKVEYQKESFALFESMMNRV 796
Query: 867 RRLTVESLVQ 876
R T+E + +
Sbjct: 797 RDNTIEYIFK 806
>gi|242309283|ref|ZP_04808438.1| preprotein translocase seca subunit [Helicobacter pullorum MIT
98-5489]
gi|239524324|gb|EEQ64190.1| preprotein translocase seca subunit [Helicobacter pullorum MIT
98-5489]
Length = 854
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/431 (47%), Positives = 282/431 (65%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEMKT +VTVNDYLAQRDA
Sbjct: 85 MRHFDVQLIGGIALHEGKIAEMKTGEGKTLVATLPVCLNAMLGKGVHIVTVNDYLAQRDA 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERR-SNYRCDITYTNNSELGFDYLRDNLAANSEQLV 96
E M ++ FLG SVG+I G + R + Y CDI Y N+E GFDYLRDN+ + Q V
Sbjct: 145 ETMRPLYEFLGYSVGIIIGGNYDDSNRLAQYSCDIVYGTNNEFGFDYLRDNMKYDYNQKV 204
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
K HFAIVDEVDS+LIDE R PL+ISG A+K + Y +A +VA L + YT++
Sbjct: 205 Q---KNHHFAIVDEVDSILIDEARTPLIISGPANKVLENYKIANEVALKLKEEKDYTIDE 261
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
KN + LTEEGI AE ++L+ EN A + ALKA +++D Y++R+G+ +
Sbjct: 262 KNRVILLTEEGINHAEKLFNIDNLYSIENAILAHHLDQALKANNLFKKDKDYVLRDGEVV 321
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ E RR+SEG+HQA+EAKEG+KI+ +S +A ITYQ+ F+LY KL+GMTGTA
Sbjct: 322 IVDEFTGRLSEGRRFSEGLHQALEAKEGVKIKEESQTLADITYQNYFRLYDKLAGMTGTA 381
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EFL+++ + V+ +PTNLP R DL + T + K++ +++ + + G+P+LV
Sbjct: 382 QTEASEFLQIYNLEVVSIPTNLPIQRKDLNDLIYKTEKEKFKALVEKIVELHKKGQPILV 441
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE + +LLK Q IPH+VLNA K+ A+EAE + AG K A+TI+TNMAGRG D
Sbjct: 442 GTASIEKSEKIHELLKSQRIPHSVLNA--KHHAQEAEIIKDAGNKGAVTIATNMAGRGVD 499
Query: 396 IILGGNPKMLA 406
I + + L
Sbjct: 500 IKINDEVRQLG 510
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV++LGGL++IGT HESRRIDNQLRGR+GRQGDPG+++F +SL+D + + F D
Sbjct: 505 EVRQLGGLYIIGTERHESRRIDNQLRGRSGRQGDPGTSQFYLSLEDPLLRIFGSDK--IK 562
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+++ ++ DE IE + R + Q E +F RK L+E+D+V QRK +Y LR
Sbjct: 563 NIMDKLGLDEGEHIESKLVTRSVENAQKKVENMHFEARKHLLEYDDVANEQRKAIYRLRD 622
Query: 650 SILTGANESCSQQIFQ 665
+L N+ S +I +
Sbjct: 623 ELLN-PNQDISHRIIE 637
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 779 NLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVN 838
N Y+ +IL SY + S D E+E+ V ++TLD WRDHL M+ L + +
Sbjct: 687 NEFESYIDEILTKSYEEKM--SILDKPTRIEIEKLVYLQTLDNLWRDHLYIMDNLKTGIG 744
Query: 839 VRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSPMESQE 886
+R + ++PL EYK + F+ ++ + ++ L VQ ++ E++E
Sbjct: 745 LRGYNQKDPLVEYKKESYNLFLELVEQIKYTAIKMLHKVQLKNATQENEE 794
>gi|335420342|ref|ZP_08551380.1| preprotein translocase subunit SecA [Salinisphaera shabanensis
E1L3A]
gi|334894701|gb|EGM32886.1| preprotein translocase subunit SecA [Salinisphaera shabanensis
E1L3A]
Length = 933
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/442 (48%), Positives = 278/442 (62%), Gaps = 50/442 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEMKT ++TVNDYLA RDA
Sbjct: 80 MRHFDVQLVGGLVLHQGKIAEMKTGEGKTLVATLTTYLNALPADGVHIITVNDYLASRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++RFLGL+VG+I G P+ +R+ Y CDITY N+E GFDYLRDN+A + V
Sbjct: 140 EWMGRLYRFLGLTVGVIFSGQDPQAKRAAYACDITYGTNNEFGFDYLRDNMAFSPADRVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R P ++AI+DEVDS+LIDE R PL+ISG D P + + LV+ L
Sbjct: 200 R---PLNYAIIDEVDSILIDEARTPLIISGPTDDD----PETSMRVDRLVKHLDEQKEED 252
Query: 152 ----YTVELKNNSVELTEEGIALAEMAL-------ETNDLWDENDPWARFVMNA-LKAKE 199
Y+ E KN V LTE+G E + E L+D N+ MNA L+A
Sbjct: 253 GPGDYSPEEKNKQVFLTEDGHQKVEGLMRESGLLDEGESLYDANNVALMHHMNAALRAHV 312
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
Y+RDV YI+ +G+ +I++E TGR RRWS+G+HQA+EAKEG+KIQ ++ +A IT+Q
Sbjct: 313 LYQRDVDYIIADGQIVIVDEFTGRTMPGRRWSDGLHQAIEAKEGVKIQKENQTLASITFQ 372
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F+LY KLSGMTGTA TE EF ++ + V+ +PTN P +R DLP Q F T K++
Sbjct: 373 NFFRLYDKLSGMTGTADTEAYEFQTIYGLEVVVIPTNKPLLRKDLPDQIFMTGAEKFQAI 432
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
+E + G+PVL+G+ S+E SE S LL+Q GI H VLNA K REAE +AQAGR
Sbjct: 433 AEEAKRASEAGQPVLIGTASIEASELSSRLLRQLGIRHEVLNA--KQHEREAEIIAQAGR 490
Query: 380 KYAITISTNMAGRGTDIILGGN 401
A+TI+TNMAGRGTDI+LGGN
Sbjct: 491 PGAVTIATNMAGRGTDIVLGGN 512
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 73/346 (21%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+VIG+ HESRR+DNQLRGR+GRQGDPG++RF +SL+D + + F+ ++
Sbjct: 545 GGLYVIGSERHESRRVDNQLRGRSGRQGDPGASRFYLSLEDSLMRIFT--PPRLRSMLQN 602
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +E IE + R + Q E ++F IRK L+E+D V QR+ VY+ R I+
Sbjct: 603 LGLEEGEAIEHKWVTRAIENAQRKVESHHFDIRKQLLEYDNVANDQRQVVYEQRNEIMDA 662
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
+ + VV++++ ++ P W +D L++ G
Sbjct: 663 --DDVGDIVENIWDEVVNDVVSQHIPPQSLEEQWDVDGLVESIQRDFG------------ 708
Query: 715 DTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNG-R 773
+ELP L++WL L + G R
Sbjct: 709 -------QELP-------------------------------LQQWLD-EDKTLDEEGLR 729
Query: 774 YRATTNLLRKYLGDILIASYLNVVQESRYDDV---YMKEVERAVLVKTLDCFWRDHLINM 830
R +T L + Y E++ +D + ++E+AVL++ LD WR+HL +M
Sbjct: 730 ERISTELKQAY--------------EAKREDAGAEVLAQIEKAVLLQVLDSLWREHLASM 775
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
+ L +++R + ++P EYK + F ML+ + TV L +
Sbjct: 776 DYLRKGIHLRGYAQKDPKNEYKREAFEMFNDMLTRLKHETVTVLAR 821
>gi|421858650|ref|ZP_16290914.1| preprotein translocase subunit [Paenibacillus popilliae ATCC 14706]
gi|410831823|dbj|GAC41351.1| preprotein translocase subunit [Paenibacillus popilliae ATCC 14706]
Length = 836
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 281/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VLH+G IAEMKT V+TVNDYLA RD+E
Sbjct: 81 RHYDVQLLGGMVLHEGKIAEMKTGEGKTLVGTLPVYLNALAGKGVHVITVNDYLATRDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++++FLG++VGL GM P ++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYQFLGMTVGLNLAGMDPLMKKEAYACDITYGTNNEYGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P FAI+DEVDS+LIDE R PL+ISG+A+K Y +A + L YT+++K
Sbjct: 201 ---PLSFAIIDEVDSILIDEARTPLIISGQAAKSTEFYHIADTFVKTLKPEEDYTIDVKT 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V L E G++ AE L ++L+D +N V+ ALKA RRDV Y+V +G+ +I+
Sbjct: 258 RQVALAEPGVSKAEKMLGVDNLFDVKNVTLNHHVLQALKANVIMRRDVDYVVNDGEIVIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE L++Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRMMAGRRYSDGLHQAIEAKEKLEVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF ++ + V+++PTN PN R D P + T K+ +E+ ++ +PVLVG+
Sbjct: 378 EEEEFKSIYGLEVVQIPTNKPNQRKDGPDVVYKTENAKYNSVVEEIVERHQMQQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LSD L+++GI H VLNA K+ EAE +++AG+ +TI+TNMAGRGTDII
Sbjct: 438 VSIENSELLSDKLRKKGIKHQVLNA--KFHREEAEIISRAGQPGQVTIATNMAGRGTDII 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVAALGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMRRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ +ED PIE I R + Q E F +RK ++++D+V+ QR+ +Y
Sbjct: 555 VLGMMERLGFEEDQPIESKLITRAVESAQKRVEGNNFDLRKVVLQYDDVMNQQREIIYRQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R+ +L E+ Q + ++ ++ + + + P W L +++
Sbjct: 615 RREVLEA--ENIRQIVMDMIKPCIERTVDAHCNEDDIPENWELQEIV 659
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 787 DILIASYLNVV------QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR 840
D ++ S N V +E R ++E E+ V+++ +D W DH+ M+ L +++R
Sbjct: 683 DEIVESLFNKVVEKYTEREERLGSELVREFEKVVVLRAVDSKWMDHIDAMDHLRQGIHLR 742
Query: 841 SFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
++G +PL EY+ +G F +M+++ + E + QY
Sbjct: 743 AYGGTDPLREYQFEGYEMFNNMVASIQ----EEVAQY 775
>gi|237752608|ref|ZP_04583088.1| preprotein translocase subunit SecA [Helicobacter winghamensis ATCC
BAA-430]
gi|229376097|gb|EEO26188.1| preprotein translocase subunit SecA [Helicobacter winghamensis ATCC
BAA-430]
Length = 854
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/421 (48%), Positives = 281/421 (66%), Gaps = 30/421 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT +VTVNDYLAQRDA
Sbjct: 85 MRHFDVQLIGGIVLHEGKIAEMKTGEGKTLVATLPVCLNAMVGKSVHIVTVNDYLAQRDA 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERR-SNYRCDITYTNNSELGFDYLRDNLAANSEQLV 96
E M ++ FLG SVG+I G E R + Y CDI Y N+E GFDYLRDN+ + Q V
Sbjct: 145 ELMRPLYEFLGYSVGIILSGNYDETNRLAQYSCDIVYGTNNEFGFDYLRDNMKYDYNQKV 204
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
K HFAIVDEVDS+LIDE R PL+ISG A++ + Y +A +VA L + HY ++
Sbjct: 205 Q---KHHHFAIVDEVDSILIDEARTPLIISGPANRTLDNYKLANEVALKLKEETHYIIDE 261
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
KN ++ LTE GI+ AE + ++L+ EN A + ALKA + ++ D Y++R+G+ +
Sbjct: 262 KNRTIMLTEVGISEAEKLFKIDNLYSVENAILAHHLDQALKANKLFKIDKDYVLRDGEVI 321
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ E RR+SEG+HQA+EAKEG++I+ +S +A ITYQ+ F+ Y KL+GMTGTA
Sbjct: 322 IVDEFTGRLSEGRRFSEGLHQALEAKEGVQIKEESQTLADITYQNYFRFYEKLAGMTGTA 381
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EFL+++ + VI +PTN+P R DL + T K++ Q++ + + G+P+LV
Sbjct: 382 QTEASEFLQIYNLDVISIPTNIPIQRKDLNDLIYKTEVEKFKALTQKIVELHKNGQPILV 441
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE L +LLK++ IPH+VLNA K A+EAE + AG+K A+TI+TNMAGRG D
Sbjct: 442 GTASIEKSEKLHELLKKERIPHSVLNA--KQHAKEAEIIKDAGKKGAVTIATNMAGRGVD 499
Query: 396 I 396
I
Sbjct: 500 I 500
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ LGGL++IGT HESRRIDNQLRGR+GRQGDPG+++F +SL+D + + F D
Sbjct: 505 EVRALGGLYIIGTERHESRRIDNQLRGRSGRQGDPGTSQFYLSLEDSLLRIFGSDK--IK 562
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+++ ++ DE IE + R + Q E +F RK L+E+D+V QRK +Y R
Sbjct: 563 NIMDKLGLDEGEHIESKLVTRSVENAQKKVESMHFEARKHLLEYDDVANEQRKAIYRARN 622
Query: 650 SIL 652
+L
Sbjct: 623 ELL 625
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 774 YRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRL 833
Y N Y+ + LI Y +Q D E+E+ V ++TLD WR+HL M+ L
Sbjct: 682 YFKNNNNFEAYIEEALIRDYEAKMQ--HIDPKTRSEIEKLVYLQTLDNLWREHLYVMDNL 739
Query: 834 SSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
+ + +R + ++PL EYK + F+ ++ + ++ L
Sbjct: 740 KTGIGLRGYNQKDPLVEYKKESYNLFVELIEQIKYTAIKML 780
>gi|209965939|ref|YP_002298854.1| preprotein translocase subunit SecA [Rhodospirillum centenum SW]
gi|226732237|sp|B6IUW0.1|SECA_RHOCS RecName: Full=Protein translocase subunit SecA
gi|209959405|gb|ACJ00042.1| preprotein translocase, SecA subunit [Rhodospirillum centenum SW]
Length = 918
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/464 (47%), Positives = 293/464 (63%), Gaps = 36/464 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH G IAEM+T VVTVNDYLA+RD+
Sbjct: 82 RHFDVQLMGGMVLHTGKIAEMRTGEGKTLVATLAVYLNALEGKGVHVVTVNDYLAKRDSG 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +++RFLGLSVG I G+ ERR+ Y DITY N+E GFDYLRDN+ +V R
Sbjct: 142 WMGQIYRFLGLSVGCIVHGLDDAERRAAYAADITYGTNNEFGFDYLRDNMKYRLADMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF+FAIVDEVDS+LIDE R PL+ISG ++ Y KV VQ + + K
Sbjct: 202 ---PFNFAIVDEVDSILIDEARTPLIISGPSTDSSELYIALDKVVRETVQDGDFEKDEKA 258
Query: 159 NSVELTEEGIA-----LAEMAL-ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTE G L E+ L +T DL+D N V AL+A + + RDV YIV++
Sbjct: 259 RAVSLTEGGTEKVAQRLIEIGLLKTGDLYDIHNVTLVHHVNQALRAHKLFTRDVDYIVKD 318
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
K +II+E TGR+ E RR+SEG+HQA+EAKEG+ IQ ++ +A IT+Q+ F+LYPKL+GM
Sbjct: 319 DKVVIIDEFTGRMMEGRRYSEGLHQALEAKEGVTIQRENQTLASITFQNYFRLYPKLAGM 378
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF++++ +PV+++PTNLP R D + + TA K+ +E +
Sbjct: 379 TGTAMTEAAEFMEIYGLPVVDMPTNLPVRRKDQDDEVYRTADEKYAAIITLIEECRARQQ 438
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+ S+E SE LSD LK++ +PHNVLNAR Y +EA VAQAGR A+TI+TNMAG
Sbjct: 439 PVLVGTVSIEKSELLSDFLKKKKVPHNVLNAR--YHEQEAYIVAQAGRPGAVTIATNMAG 496
Query: 392 RGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK 435
RGTDI LGGN +M + + D L REA + D+ ++ K
Sbjct: 497 RGTDIQLGGNLEMRIEHELSD-LPEGPEREAAIARIRDEIAAAK 539
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V + GGL+V+GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F S +D
Sbjct: 542 VLKAGGLYVVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRIFG---SQRLD 598
Query: 591 -LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++ ++ E I I + L Q E + F IRK+L+++D V+ QRK VY+ R+
Sbjct: 599 GMLQKLGLQEGEAIIHPWINKALEKAQTKVEAHNFDIRKNLLKYDNVMNDQRKVVYEQRR 658
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKIL 705
++ E + V+ E++ + P + W+ D+L +E + + G L
Sbjct: 659 DVMDA--EDVQDTVVSMRHEVIQEMVSKAIPPNAYAEQWNTDQLHEEVMRVLGADL 712
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E+ Y M+ +E+++L++ LD W+DHL+N++ L +N+R++ R+PL EYK +
Sbjct: 743 KEAAYGATLMRSIEKSLLLQILDQQWKDHLLNLDHLRQGINLRAYAQRDPLNEYKREAFG 802
Query: 858 FFISMLSATR 867
F +ML++ R
Sbjct: 803 LFETMLASLR 812
>gi|422939755|ref|ZP_16967128.1| translocase subunit SecA [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339890470|gb|EGQ79590.1| translocase subunit SecA [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 880
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKKVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQRLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 8/206 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMVWMDRLKLPEGEPITHRMINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E I+
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKIYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIAIAGK 703
P + W +D K LK F A K
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYAYEEK 728
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSS--PMESQE 886
EYK+ + F M++ + L + S P++ +E
Sbjct: 807 TEYKLISSQIFEEMIATIQEQATSFLFKVIVSTEPVKDEE 846
>gi|254973802|ref|ZP_05270274.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-66c26]
gi|255091189|ref|ZP_05320667.1| preprotein translocase SecA subunit [Clostridium difficile CIP
107932]
gi|255312846|ref|ZP_05354429.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-76w55]
gi|255515605|ref|ZP_05383281.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-97b34]
gi|255648699|ref|ZP_05395601.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-37x79]
gi|260681921|ref|YP_003213206.1| preprotein translocase SecA subunit [Clostridium difficile CD196]
gi|260685519|ref|YP_003216652.1| preprotein translocase SecA subunit [Clostridium difficile R20291]
gi|306518819|ref|ZP_07405166.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-32g58]
gi|384359473|ref|YP_006197325.1| preprotein translocase SecA subunit [Clostridium difficile BI1]
gi|260208084|emb|CBA60324.1| preprotein translocase SecA subunit [Clostridium difficile CD196]
gi|260211535|emb|CBE01709.1| preprotein translocase SecA subunit [Clostridium difficile R20291]
Length = 891
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/432 (46%), Positives = 281/432 (65%), Gaps = 30/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 LRHYRVQMIGGIVLHQGRIAEMKTGEGKTLVATAPVYLNALTGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLG+SVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ V
Sbjct: 139 DQMAKIYEFLGMSVGVIIHGQNPKVRKEQYDCDITYGTNNEYGFDYLKDNMVIHKEQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L ++ Y +E K
Sbjct: 199 RG---LNYAIVDEVDSILIDEARTPLIISGPGDKSTHLYSDANTFV-LTLKPDDYELEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LT GI AE+ +++ D + + AL+A ++DV Y+ ++G+ +I
Sbjct: 255 DKAVSLTASGIQKAEVYFNVDNITDISHTELYHHINQALRAHVIMKKDVDYVAKDGEIVI 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGLKIQ +S +A +T+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSEGLHQAIEAKEGLKIQRESKTLATVTFQNYFRMYKKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN +R DLP + + GK+ QE+ ++ +P+LVG
Sbjct: 375 TEEEEFKAIYKMDVFQVPTNKLMVREDLPDSVYKSEIGKFNAVAQEIIERHKVNQPILVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GI H VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSQILKKKGIKHEVLNA--KHHDKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLAKK 408
+LGGNP L K+
Sbjct: 493 VLGGNPDFLTKR 504
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 4/141 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGRAGRQGDPGS+RF + L D++ + F D + + +
Sbjct: 563 GGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIGLDDDLMRLFGSDRISGI--VDK 620
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
I +EDMPIE + + + G Q E FGIRK ++++D+V+ QR+ +Y R+ +L G
Sbjct: 621 IGLEEDMPIEHRILSKSIEGAQKKVEGKNFGIRKHVLQYDDVMNKQREIIYAERKRVLEG 680
Query: 655 ANESCSQQIFQYMQAVVDEII 675
E +QI ++++E +
Sbjct: 681 --EDLQEQIQSMTHSIIEEAV 699
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++ +D W DH+ M++L + +R+ G ++P+ YK++G F M
Sbjct: 764 MREVERVILLQAVDNHWIDHIDAMDQLRQGIGLRAVGQQDPVIAYKMEGFDMFDEMNKHI 823
Query: 867 RRLTVESLVQYW-SSPMESQ 885
+ TV L +P+E +
Sbjct: 824 KEDTVRYLFNITIETPVERK 843
>gi|395237520|ref|ZP_10415582.1| Protein translocase subunit secA 1 [Turicella otitidis ATCC 51513]
gi|423351193|ref|ZP_17328844.1| protein translocase subunit secA 1 [Turicella otitidis ATCC 51513]
gi|394487195|emb|CCI83670.1| Protein translocase subunit secA 1 [Turicella otitidis ATCC 51513]
gi|404386793|gb|EJZ81932.1| protein translocase subunit secA 1 [Turicella otitidis ATCC 51513]
Length = 852
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/428 (46%), Positives = 279/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+ VQ++GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 RHYLVQVMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH FLGLSVG+I GM PEERR Y DITY N+E GFDYLRDN+ + +V R
Sbjct: 140 WMGRVHHFLGLSVGVILSGMRPEERREAYNADITYGTNNEFGFDYLRDNMVRSLGDVVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISG + V A++A + +G HY V+ +
Sbjct: 200 G---HHYAIVDEVDSILIDEARTPLIISGPVHGSGQYFNVFAQLAPRMKEGTHYEVDRRK 256
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG++ E L ++L+ EN ++ NA+KAKE + +D YIV G+ I+
Sbjct: 257 RTVGVLEEGVSFVEDQLGIDNLYSPENSQLVSYLNNAIKAKELFEKDKDYIVAKGEVKIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGR+ + RR++EG+HQA+EAKE + I+ ++ +A +T Q+ F++Y KL+GMTGTA++
Sbjct: 317 DSFTGRILDGRRYNEGMHQAIEAKEHVDIKNENQTLASVTLQNYFRMYDKLAGMTGTAQS 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E + +++ V+ +PTNLP R D + + T K+ +++ G+PVLVG+
Sbjct: 377 EAAELNQTYKLDVVPIPTNLPTQRQDDQDRIYKTQEAKFAAVASDIQERQAAGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ H VLNA K+ EAE VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLTRRGVKHKVLNA--KHHEEEAEIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP +L
Sbjct: 495 LGGNPDIL 502
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 519 DCEVHCSNE-----GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
D E+ + E G E + GGL+V+GT H+S RIDNQLRGR GRQGDPG TRF +S+
Sbjct: 526 DNEIEGAKERSKRLGDEARENGGLYVVGTERHDSSRIDNQLRGRCGRQGDPGETRFYLSM 585
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+DE+ +F T +++R+ +D+PIE + R + Q E +RK+++++
Sbjct: 586 RDELMVRFVGQTME--QMMNRLHLPDDVPIEAKMVTRAVKNAQGQVENQNQEMRKNVLKY 643
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEVL QRK +Y R+ +L A+ S+ I Q ++D+ I G VD Y W L
Sbjct: 644 DEVLNQQRKVIYGERRQLLEAAD--ISETITQ----MIDDTINGYVDAETAEGYVEDWDL 697
Query: 691 DKL 693
D+L
Sbjct: 698 DRL 700
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 762 MRDLERMVILPVIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDLFKAMNDGI 821
Query: 867 RRLTVESLVQYWS 879
+ TV L Q S
Sbjct: 822 KEETVRQLFQLRS 834
>gi|283856364|ref|YP_162659.2| preprotein translocase subunit SecA [Zymomonas mobilis subsp.
mobilis ZM4]
gi|292495036|sp|Q5NP12.2|SECA_ZYMMO RecName: Full=Protein translocase subunit SecA
gi|283775363|gb|AAV89548.2| preprotein translocase, SecA subunit [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 925
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 278/430 (64%), Gaps = 36/430 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQIIGG VLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQIIGGIVLHRGEIAEMRTGEGKTLVATLACYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +V+RFLGL+VG++ + EERR Y DITY N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 QMGQVYRFLGLTVGVVMPNISDEERRQAYLADITYATNNELGFDYLRDNMKYTREQMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AI+DEVDS+LIDE R PL+ISG Y +V + L Y ++ K
Sbjct: 202 ---PFNYAIIDEVDSILIDEARTPLIISGPTDDKSDLYIAIDQVVKKLGSD-DYEIDEKQ 257
Query: 159 NSVELTEEGIALAEMALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTEEG AE L+ + +L+D EN + AL+A +RRDV Y+VRN
Sbjct: 258 KNVVLTEEGTERAEQFLKADGLLPEGNLYDFENTQIVHHLNQALRANLMFRRDVDYLVRN 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
K +II+E TGR+ + RRWSEG+HQA+EAKEG++I+ ++ +A IT+Q+ F+LYP+++GM
Sbjct: 318 NKVVIIDEFTGRMMDGRRWSEGLHQAIEAKEGVQIEPENQTLASITFQNYFRLYPRIAGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF ++++M V+ +PTNLP R D Q + K+ + ++ G+
Sbjct: 378 TGTAATEATEFHQIYKMNVVTIPTNLPVQRKDENDQFYKNLEDKFRAIAKSIKEHAASGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+ S+E SE LS+ L+ +G+PH VLNAR Y EA VAQAGR A+TI+TNMAG
Sbjct: 438 PILVGTVSIEKSELLSEYLRHEGVPHKVLNAR--YHEMEAHIVAQAGRLGAVTIATNMAG 495
Query: 392 RGTDIILGGN 401
RGTDI LGGN
Sbjct: 496 RGTDIQLGGN 505
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E +V GGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F
Sbjct: 534 VAEEKQKVLDAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLLRIFGS 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA-----EKYYFGIRKSLVEFDEVLE 638
T +A + + + G+AIV ++ I E + IRK +VE+D+V+
Sbjct: 594 QTMFAKMMNKSLAD-------GEAIVSPIMSKAIETAQRKVEARNYDIRKQVVEYDDVMN 646
Query: 639 VQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
QRK +Y+ R +++ ES + + + + + +++ ++ W +D+L
Sbjct: 647 DQRKVIYEQRATVMDA--ESVNDLVEEMREDTIADLVSETCPEDQYVEQWDIDQL 699
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+++ L++ +D W++HL ++ L +++R++ + P+ EYK + F ML + R
Sbjct: 754 IQKNTLLQAIDHHWKEHLSVLDSLRQIIHLRAYAQQTPINEYKHEAFALFERMLISIRED 813
Query: 870 TVESL--VQYWSSPMESQEL 887
+L ++ + E EL
Sbjct: 814 VTRNLSRIELFQPSFELSEL 833
>gi|307243845|ref|ZP_07525974.1| preprotein translocase, SecA subunit [Peptostreptococcus stomatis
DSM 17678]
gi|306492783|gb|EFM64807.1| preprotein translocase, SecA subunit [Peptostreptococcus stomatis
DSM 17678]
Length = 896
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/432 (47%), Positives = 277/432 (64%), Gaps = 30/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MRHFKVQLIGGMVLHQGRIAEMKTGEGKTLVATCPVYLNALEGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLGLSVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ+V
Sbjct: 139 DQMAKIYEFLGLSVGVIVHGQSPQLRKQQYDCDITYGTNNEYGFDYLKDNMVIHEEQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+L+DE R PL+ISG K Y A V L + Y E K
Sbjct: 199 RG---LHYAIVDEVDSILVDEARTPLIISGPGDKSTHLYS-DANVFILTLNEDDYEKEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTE GI AE+ +++ E+ + ALKA ++DV Y+ ++ + +I
Sbjct: 255 DKAVSLTETGIKKAEVYFNVDNITTMEHTELYHHINQALKAHTIMKKDVDYVAKDDEIII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL IQ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSDGLHQAIEAKEGLTIQRESKTLATITFQNYFRMYTKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN P +R DL +A K+ ++++ +PVLVG
Sbjct: 375 TEEEEFKSIYKMDVFQVPTNKPLLRKDLADSVYANQLAKFRAVARDIKERHERNQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +L ++GI H VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSSILTEEGIAHEVLNA--KFHEKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLAKK 408
+LGGNP +A K
Sbjct: 493 LLGGNPSFMALK 504
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 12/213 (5%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
TY + ++ +V E V GGL ++GT HESRRIDNQLRGRAGRQGDPG +RF +
Sbjct: 540 TYKKLYEEYKVQTDAEQLAVIEAGGLCILGTERHESRRIDNQLRGRAGRQGDPGESRFYI 599
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
L D++ + F + + + ++ D++ PIE + + + Q E FGIRK ++
Sbjct: 600 GLDDDLMRLFGSERVQGI--LEKLGLDDETPIEHRMLTKSIENAQKKVEGKNFGIRKHVL 657
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP---LKHPRYW 688
E+D+V+ QR+ +Y R+ +L+G E+ QI M+ V+ E + D H Y
Sbjct: 658 EYDDVMNKQREIIYAERKRVLSG--ENLQDQIQIMMRDVITEAVAIYTDENEVFDHVGYR 715
Query: 689 SLDKLLKEFIAIAGKILDDL-FAGISGDTLLKS 720
+ + +++ + G ++DDL F+ ++ L++
Sbjct: 716 A--HMYRKY--LPGGVIDDLDFSSMTSSEALEA 744
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++++D W DH+ M++L + +R+ G +P+ YK++G F M
Sbjct: 765 MREVERVILLQSVDNHWIDHIDAMDQLRQGIGLRAIGQIDPVIAYKMEGFDMFDEMNKLI 824
Query: 867 RRLTVESL 874
R TV L
Sbjct: 825 REDTVSYL 832
>gi|336419992|ref|ZP_08600242.1| preprotein translocase, SecA subunit [Fusobacterium sp. 11_3_2]
gi|336162500|gb|EGN65466.1| preprotein translocase, SecA subunit [Fusobacterium sp. 11_3_2]
Length = 880
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQRLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKVYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIA 699
P + W +D K LK F A
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYA 724
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSA 865
EYK+ + F M++
Sbjct: 807 TEYKLISSQIFEEMIAT 823
>gi|397676261|ref|YP_006517799.1| protein translocase subunit secA [Zymomonas mobilis subsp. mobilis
ATCC 29191]
gi|395396950|gb|AFN56277.1| Protein translocase subunit secA [Zymomonas mobilis subsp. mobilis
ATCC 29191]
Length = 925
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 278/430 (64%), Gaps = 36/430 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQIIGG VLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQIIGGIVLHRGEIAEMRTGEGKTLVATLACYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +V+RFLGL+VG++ + EERR Y DITY N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 QMGQVYRFLGLTVGVVMPNISDEERRQAYLADITYATNNELGFDYLRDNMKYTREQMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AI+DEVDS+LIDE R PL+ISG Y +V + L Y ++ K
Sbjct: 202 ---PFNYAIIDEVDSILIDEARTPLIISGPTDDKSDLYIAIDQVVKKLGSD-DYEIDEKQ 257
Query: 159 NSVELTEEGIALAEMALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTEEG AE L+ + +L+D EN + AL+A +RRDV Y+VRN
Sbjct: 258 KNVVLTEEGTERAEQFLKADGLLPEGNLYDFENTQIVHHLNQALRANLMFRRDVDYLVRN 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
K +II+E TGR+ + RRWSEG+HQA+EAKEG++I+ ++ +A IT+Q+ F+LYP+++GM
Sbjct: 318 NKVVIIDEFTGRMMDGRRWSEGLHQAIEAKEGVQIEPENQTLASITFQNYFRLYPRIAGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF ++++M V+ +PTNLP R D Q + K+ + ++ G+
Sbjct: 378 TGTAATEATEFHQIYKMNVVTIPTNLPVQRKDENDQFYKNLEDKFRAIAKSIKEHAASGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+ S+E SE LS+ L+ +G+PH VLNAR Y EA VAQAGR A+TI+TNMAG
Sbjct: 438 PILVGTVSIEKSELLSEYLRHEGVPHKVLNAR--YHEMEAHIVAQAGRLGAVTIATNMAG 495
Query: 392 RGTDIILGGN 401
RGTDI LGGN
Sbjct: 496 RGTDIQLGGN 505
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E +V GGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F
Sbjct: 534 VAEEKQKVLEAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLLRIFGS 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA-----EKYYFGIRKSLVEFDEVLE 638
T +A + + + G+AIV ++ I E + IRK +VE+D+V+
Sbjct: 594 QTMFAKMMNKSLAD-------GEAIVSPIMSKAIETAQRKVEARNYDIRKQVVEYDDVMN 646
Query: 639 VQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
QRK +Y+ R +++ ES + + + + + +++ ++ W +D+L
Sbjct: 647 DQRKVIYEQRATVMDA--ESVNDLVEEMREDTIADLVSETCPEDQYVEQWDIDQL 699
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+++ L++ +D W++HL ++ L +++R++ + P+ EYK + F ML + R
Sbjct: 754 IQKNTLLQAIDHHWKEHLSVLDSLRQIIHLRAYAQQTPINEYKHEAFALFERMLISIREN 813
Query: 870 TVESL--VQYWSSPMESQEL 887
+L ++ + E EL
Sbjct: 814 VTRNLSRIELFQPSFELSEL 833
>gi|332983174|ref|YP_004464615.1| protein translocase subunit secA [Mahella australiensis 50-1 BON]
gi|332700852|gb|AEE97793.1| protein translocase subunit secA [Mahella australiensis 50-1 BON]
Length = 839
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 275/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ++GG VLH G IAEMKT +VTVNDYLA+RD
Sbjct: 80 MRHFPVQLLGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGEGVHIVTVNDYLARRDR 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL VGLIQ M R+ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 140 EWMGKIYEFLGLKVGLIQHDMDSAARQEAYAADITYGTNNEFGFDYLRDNMVIYKENMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A K A L + + Y V+ K
Sbjct: 200 RG---LNYAIVDEVDSILIDEARTPLIISGAGQKSTELYYKADKFALRLAKDIDYEVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LTEEG AE +++ D EN ++ A+KA RRDV Y+V++ + +I
Sbjct: 257 AKTISLTEEGSRKAERFFNVDNITDMENTELLHNIIQAIKAHVLMRRDVDYVVKDNEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+++Q +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGVRVQRESRTLATITFQNYFRMYKKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V+ +PTN+P IR D P + T K++ +E+ G+PVLVG
Sbjct: 377 TEEEEFQSIYGLDVVVIPTNMPMIRKDYPDVIYRTEEAKFKAVTEEIAQRHAKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +L+Q+GIPH VLNA KY +EAE +A+AG+ A+TI+TNMAGRGTDI
Sbjct: 437 TISIEKSEKLSRMLEQRGIPHQVLNA--KYHEKEAEIIAKAGQPGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 103/166 (62%), Gaps = 4/166 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G + + GGLHV+GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 497 GEGIAQKGGLHVMGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLLRLFGSDR-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++L+ + D+D PIE + + +Q+ Q E F IRK L+E+D VL VQR+ +Y
Sbjct: 555 IMNLVDALGMDDDTPIENNMLTKQIEAAQKRVEAKNFDIRKQLLEYDNVLNVQREVIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ +L G E+ I ++++V+E + HP W ++ L
Sbjct: 615 RRQVLEG--ENLKDSILDMIKSLVEEAVKLYTSNSPHPEEWDIEGL 658
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++K +D W DHL +M+RL + +R++G R+PL EYKI+G F M+ +
Sbjct: 711 MRELERVVMLKVVDQKWMDHLDDMDRLRDGIGLRAYGQRDPLVEYKIEGYDMFQEMIHSI 770
Query: 867 RRLTV 871
+ TV
Sbjct: 771 QEDTV 775
>gi|260495085|ref|ZP_05815214.1| preprotein translocase, SecA subunit [Fusobacterium sp. 3_1_33]
gi|260197528|gb|EEW95046.1| preprotein translocase, SecA subunit [Fusobacterium sp. 3_1_33]
Length = 880
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQRLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKVYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIA 699
P + W +D K LK F A
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYA 724
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSA 865
EYK+ + F M++
Sbjct: 807 TEYKLISSQIFEEMIAT 823
>gi|336401488|ref|ZP_08582255.1| translocase subunit secA [Fusobacterium sp. 21_1A]
gi|336161000|gb|EGN64021.1| translocase subunit secA [Fusobacterium sp. 21_1A]
Length = 880
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQRLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKVYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIA 699
P + W +D K LK F A
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYA 724
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSS--PMESQE 886
EYK+ + F M++ + L + S P++ +E
Sbjct: 807 TEYKLISSQIFEEMIATIQEQATSFLFKVIVSTEPVKDEE 846
>gi|423137579|ref|ZP_17125222.1| protein translocase subunit secA [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371959961|gb|EHO77632.1| protein translocase subunit secA [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 880
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQRLYEKGQPVLVGTISIKSSEELSELLKKKGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKVYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIA 699
P + W +D K LK F A
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYA 724
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSS--PMESQE 886
EYK+ + F M++ + L + S P++ +E
Sbjct: 807 TEYKLISSQIFEEMIATIQEQATSFLFKVIVSTEPVKDEE 846
>gi|317130278|ref|YP_004096560.1| preprotein translocase subunit SecA [Bacillus cellulosilyticus DSM
2522]
gi|315475226|gb|ADU31829.1| preprotein translocase, SecA subunit [Bacillus cellulosilyticus DSM
2522]
Length = 839
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 283/430 (65%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG +LH G IAEMKT VVTVN+YLA+RDA
Sbjct: 80 LRHYSVQLIGGIILHHGDIAEMKTGEGKTLVATLAVYLNAITEKGVHVVTVNEYLAKRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGL+VGL GM +E+R+ Y CD+TY N+ELGFDYLRDN+ +Q+V
Sbjct: 140 EEMGKLYTFLGLTVGLNLSGMSKDEKRAAYNCDVTYATNNELGFDYLRDNMVIYKKQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG A K Y A +L + +T + K
Sbjct: 200 R---PLHYAIVDEVDSILIDEARTPLIISGSAEKSTQLYTAANSFVRMLKEDEDFTYDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V++T+EG++ AE +L+D E+ + ALKA + RD Y+V +G+ I
Sbjct: 257 TKNVQITDEGVSKAERTFGIENLFDSEHSQLNHHINQALKAHKVMIRDEDYVVDDGEVAI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+S+G+HQA+EAKEGL+I+ +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDQFTGRLMKGRRYSDGLHQAIEAKEGLEIKRESMTMASITFQNYFRMYEKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V VPTN P R+D P + T K+ ++++ +++ G+PVLVG
Sbjct: 377 TEEEEFRNIYGMNVYFVPTNEPIARLDQPDLIYKTMEAKFRAIVEQIDELYQKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +V+ SE +S LLK++ IPHNVLNA K REAE + AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TVNVDTSELISSLLKKKRIPHNVLNA--KNHEREAEIIENAGQRKAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 495 KLGEGVKELG 504
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D + ++F +
Sbjct: 497 GEGVKELGGLFVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDTLMRRFGSENMS 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ ED PIE + R + Q E F RK L+++D+V+ QR +Y+
Sbjct: 557 K--MMERLGMTEDQPIESKMVSRAVEQAQKRVEGNNFDARKQLLQYDDVMREQRDIIYEQ 614
Query: 648 RQSILTGAN 656
R +L N
Sbjct: 615 RMEVLESEN 623
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + +M+E E+ +L++ +D W H+ M +L +++R++G +PL EYK +G +
Sbjct: 700 REEEFTSEHMREFEKVILLRIVDSKWTAHIDQMEQLRQGIHLRAYGQNDPLREYKFEGFQ 759
Query: 858 FFISMLSA 865
F M+++
Sbjct: 760 MFEEMIAS 767
>gi|297570911|ref|YP_003696685.1| preprotein translocase subunit SecA [Arcanobacterium haemolyticum
DSM 20595]
gi|296931258|gb|ADH92066.1| preprotein translocase, SecA subunit [Arcanobacterium haemolyticum
DSM 20595]
Length = 935
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/434 (48%), Positives = 285/434 (65%), Gaps = 30/434 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G+IAEMKT VVTVNDYLA +E
Sbjct: 81 RHYDVQLMGGAALHLGNIAEMKTGEGKTLVATLAAYLNALSGDGVHVVTVNDYLASYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV RFLG++ G I G P+ERR Y DITY N++ GFDYLRDN+A N ++V R
Sbjct: 141 LMGRVFRFLGMTTGCILEGQTPDERRQQYAADITYGTNNQFGFDYLRDNMAMNESEMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGLHYTVELK 157
+FAIVDEVDS+LIDE R PL+ISG+A D R+ VA A + + Y V+ K
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGQADGDANRWYVAFADAVGKMRRDEDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ + E GI E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ +I
Sbjct: 258 KRNAGILEPGIDKVEDLLGIDNLYESVNTPLIGYLNNAIKAKELFHRDKDYIVRDGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV RR+++G+HQA+EAKEG++I+A++ +A IT Q+ F++Y KLSGMTGTA+
Sbjct: 318 VDEHTGRVLPGRRYNDGMHQAIEAKEGVEIKAENQTLASITLQNYFRMYNKLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF + + V+ +PTN P R+D +ATA K+ ++++ F G+PVLVG
Sbjct: 378 TEAEEFASTYDIGVVPIPTNRPVARIDQRDIVYATAELKFAAIVEDIKERFAEGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SVENSE LS LLK+ IPH VLNA K REA VA AGRK+A+T++TNMAGRGTDI
Sbjct: 438 TASVENSELLSMLLKKARIPHEVLNA--KQHEREASVVAMAGRKHAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKII 410
+LGGN + +A +++
Sbjct: 496 MLGGNAEHIAVEMM 509
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 104/183 (56%), Gaps = 19/183 (10%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+L+ + S E EV LGGL+V+G+ HESRRIDNQLRGRAGRQGDPG +RF +SL D
Sbjct: 530 ILQAAKDQVSAEHDEVTELGGLYVLGSERHESRRIDNQLRGRAGRQGDPGESRFYLSLDD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDE--DMPIEGDAIVR---QLLGLQISAEKYYFGIRKSL 630
++ + F S V+ + +E D + AI + QL G +AE+ RK++
Sbjct: 590 DLLRLFG---STIVNTLRNSAQEEPLDFKMMNSAIQKAQAQLDGR--NAEQ-----RKNV 639
Query: 631 VEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+++D+V+ QR VY R+ IL G + QI +M VVD+I+ N D W L
Sbjct: 640 LKYDDVMNDQRTVVYTERRRILGG--DDVENQIQNFMDFVVDDIVSANTDGPSDD--WDL 695
Query: 691 DKL 693
D L
Sbjct: 696 DML 698
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER VL++TLD WR+HL M+ L + +R+ RNPL EYK +G + F SM
Sbjct: 754 MRNIERQVLLQTLDRNWREHLYEMDYLKEGIGLRAMAQRNPLVEYKQEGYQMFQSMNDQI 813
Query: 867 RRLTVESLVQY 877
R TV L+ +
Sbjct: 814 RGETVAFLMGF 824
>gi|289766652|ref|ZP_06526030.1| translocase subunit secA [Fusobacterium sp. D11]
gi|289718207|gb|EFD82219.1| translocase subunit secA [Fusobacterium sp. D11]
Length = 880
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQRLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKVYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIA 699
P + W +D K LK F A
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYA 724
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSA 865
EYK+ + F M++
Sbjct: 807 TEYKLISSQIFEEMIAT 823
>gi|403252080|ref|ZP_10918393.1| preprotein translocase subunit SecA (ATPase, RNA helicase)
[actinobacterium SCGC AAA027-L06]
gi|402914607|gb|EJX35617.1| preprotein translocase subunit SecA (ATPase, RNA helicase)
[actinobacterium SCGC AAA027-L06]
Length = 886
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 283/438 (64%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G+IAEM+T +VTVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGATLHRGNIAEMRTGEGKTLVSTLPAYLNALTGKGVHIVTVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL VG+I M P ERR Y DITY N+E GFDYLRDN+A + V R
Sbjct: 140 WMGRVHRFLGLKVGVILASMSPAERREAYSADITYGTNNEFGFDYLRDNMAWSLADCVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A K Y A + L HY +++K
Sbjct: 200 ---EHNFAIVDEVDSILIDEARTPLIISGPADKPTKWYVEFANLVGKLTLDKHYEIDIKK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E AL +L++ N P ++ NA++AKE ++RD Y+V NG+ LI+
Sbjct: 257 RTVGILEEGVTRVEEALGIENLYEAANTPMIGYLNNAIRAKELFKRDKDYVVMNGELLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE ++IQ ++ +A IT Q+ F+LY KLSGMTGTA T
Sbjct: 317 DEHTGRMLAGRRYSEGLHQALEAKERIEIQDENQTLATITLQNYFRLYKKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF++++++ V +PTN R+D + + GK+ ++ + G+PVLVG+
Sbjct: 377 EASEFMQIYKLGVTPIPTNKNMQRIDQSDLIYKSEEGKFLAVANDIVDRHKKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE LS +LK++GI H VLNA K REA +A+AG A+T++TNMAGRGTDI+
Sbjct: 437 VSVEKSEELSSILKKRGIAHEVLNA--KQHEREAAIIARAGTIGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGNP+ +A ++ R L
Sbjct: 495 LGGNPEFMADFELQKRGL 512
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E V LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD++ ++ F
Sbjct: 536 VAKEHETVVSLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDDLMRR--F 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
++ + ED P+E + + Q E F +RK+++++D+V+ QR+
Sbjct: 594 NSGMVERFLGAAGMPEDTPLESKIVSNAIKSAQTQVESLNFEMRKNVLKYDDVMNKQREV 653
Query: 644 VYDLRQSILTGAN 656
VY R+ +L G +
Sbjct: 654 VYSERREVLEGVD 666
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
LL K L D A Y N +E++ M+E+ER +L+ LD WR+HL M+ L + +
Sbjct: 732 LLEKILQDSRQA-YQN--REAQLTPTVMRELERKILLSVLDRKWREHLYEMDYLQEGIGL 788
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
R+ R+PL EY+ +G F +M+ A + E LV +
Sbjct: 789 RAMAQRDPLVEYQREGFDLFAAMMDAMK----EELVSF 822
>gi|427414372|ref|ZP_18904562.1| preprotein translocase, SecA subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425714748|gb|EKU77751.1| preprotein translocase, SecA subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 814
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 282/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G+IAEM+T VVTVNDYLA+RD+
Sbjct: 80 MRHFDVQLIGGITLHRGNIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R LGLSVGLI + +R+ Y DITY N+E GFDYLRDN+ ++EQ+V
Sbjct: 140 EWMGKLYRALGLSVGLIVANLDYNQRKLAYASDITYGTNNEFGFDYLRDNMVIHAEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG + Y AKV LV G YT++ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGERSTDSYYTLAKVVPQLVAGEDYTIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNA-LKAKEFYRRDVQYIVRNGKALI 216
++ TE GIA E L+ +L+D + ++NA L+A RD Y+V++G+ +I
Sbjct: 257 QKTIAPTESGIAKVEKMLKIENLYDSANLELNHLLNASLRAYAMMHRDKDYVVKDGQVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK++ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASITFQNYFRMYDKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ + V E+P N P +R DLP F T + K++ ++V + G+PVLVG
Sbjct: 377 TEEQEFNNIYGLEVYEIPPNRPLLRKDLPDLIFKTKKAKYKAVVKDVVERHKKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LSD+L + G+PHNVLNA K+ +EAE VA AG++ +TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEQLSDMLLKSGVPHNVLNA--KHHEKEAEIVANAGQRGMVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 SLG 497
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS++F +SL+D++ + F D
Sbjct: 497 GEGVAELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSQFFLSLEDDLMRIFGADNIS 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ +ED PIE I + + Q E + F IRK ++E+D+V+ QR+ +YD
Sbjct: 557 G--MMDKLGMEEDEPIEHSLITKSIERAQKKVENHNFNIRKYILEYDDVMNQQREVLYDQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ IL N+S I + + ++ + + D +P W + LLK
Sbjct: 615 RRKIL--GNDSLRDTIMEMVDSLAIKAMNQYADEKLYPEEWDYEGLLKHL 662
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E+AV++K +D W +HL +M+ L + +R++G +NPL EYK + F +M+ A
Sbjct: 709 MRELEKAVMLKVVDSKWMEHLDSMDMLREGIGLRAYGQKNPLVEYKFEAYDMFEAMIEAI 768
Query: 867 RRLTV 871
+ T+
Sbjct: 769 QEDTI 773
>gi|255019997|ref|ZP_05292070.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Acidithiobacillus caldus ATCC 51756]
gi|340783387|ref|YP_004749994.1| protein export cytoplasm protein SecA ATPase RNA helicase
[Acidithiobacillus caldus SM-1]
gi|254970526|gb|EET28015.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Acidithiobacillus caldus ATCC 51756]
gi|340557538|gb|AEK59292.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Acidithiobacillus caldus SM-1]
Length = 912
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/431 (48%), Positives = 279/431 (64%), Gaps = 35/431 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG +LH G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGYMLHQGKIAEMRTGEGKTLVATLPAYLNALEGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGL+VG+I + EERR+ Y DITY N+E GFDYLRDN+A + V
Sbjct: 141 EWMGRVHRFLGLTVGVIVSDLATEERRAAYAADITYGTNNEFGFDYLRDNMAFSPADRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+LIDE R PL+ISG ++ Y +A+ V YTV+ K
Sbjct: 201 R---GLHYAIIDEVDSILIDEARTPLIISGPTEENTDLYQRVNVLAQQFVAEEDYTVDEK 257
Query: 158 NNSVELTEEGIALAEMA------LETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
V LTEEGI AE L+ +L+D +N + AL+A Y+R+ YIVR
Sbjct: 258 ARQVLLTEEGIEKAERLMLESGLLKEGNLYDIQNVTLVHHLNQALRAHVIYKRETDYIVR 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+G+ II+E TGR+ RRWS+G+HQAVEAKEG+++Q ++ +A IT+Q+ F++Y KL+G
Sbjct: 318 DGQVCIIDEFTGRMMTGRRWSDGLHQAVEAKEGVQVQNENQTLASITFQNYFRMYDKLAG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE E +++ + V+ +PT+ P R D + TA KWE ++ + G
Sbjct: 378 MTGTADTEAFELNQIYGLEVVVIPTHRPVQRKDYADLIYRTAAEKWEAIIADIRACRERG 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+TS+E++E+LS LLK+ GI H VLNA K REAE +AQAG+ A+T++TNMA
Sbjct: 438 QPVLVGTTSIEHNEFLSGLLKKAGIAHQVLNA--KQHEREAEIIAQAGKPGAVTVATNMA 495
Query: 391 GRGTDIILGGN 401
GRGTDI+LGGN
Sbjct: 496 GRGTDIVLGGN 506
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 71/355 (20%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLH+IGT HESRR+DNQLRGRAGRQGDPGS+RF +SL+D + + F D L+ +
Sbjct: 547 GGLHIIGTERHESRRVDNQLRGRAGRQGDPGSSRFYLSLEDPLMRIFGSDRLGG--LMQK 604
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ IE + + + Q E F IRK L+E+D+V QRK +Y R + +
Sbjct: 605 LGMKPGEAIEHPWVTKSIENAQRKVEARNFDIRKQLLEYDDVANEQRKIIYAQRNAFMDS 664
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
D L E + +LD L A +
Sbjct: 665 ------------------------------------DDLSAEIETLREDVLDALLADYAP 688
Query: 715 DTLLKSIEELPELNSIDINNF--YFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNG 772
+ +++ +LP L F +FP + +WLA +D N
Sbjct: 689 EGVMEEQWDLPGLEQALERVFAQHFP------------------VAQWLA---EDRALNH 727
Query: 773 RYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNR 832
+ L + LG + A+ +E+R + +E++++++ LD W+DHL +M+
Sbjct: 728 Q-----QLRERILGAVREAAR---EKEARMGSEMARHLEKSIVLQVLDSQWKDHLASMDH 779
Query: 833 LSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSPMESQ 885
L +++R + +NP +EYK + F +ML+ R V +L V +P +++
Sbjct: 780 LREGIHLRGYAQKNPKQEYKRESLMLFNAMLARIREEIVATLARVHVSEAPADAE 834
>gi|423080610|ref|ZP_17069230.1| preprotein translocase, SecA subunit [Clostridium difficile
002-P50-2011]
gi|423085977|ref|ZP_17074410.1| preprotein translocase, SecA subunit [Clostridium difficile
050-P50-2011]
gi|423088860|ref|ZP_17077230.1| preprotein translocase, SecA subunit [Clostridium difficile
70-100-2010]
gi|357548001|gb|EHJ29874.1| preprotein translocase, SecA subunit [Clostridium difficile
050-P50-2011]
gi|357552983|gb|EHJ34746.1| preprotein translocase, SecA subunit [Clostridium difficile
002-P50-2011]
gi|357558974|gb|EHJ40443.1| preprotein translocase, SecA subunit [Clostridium difficile
70-100-2010]
Length = 888
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/432 (47%), Positives = 281/432 (65%), Gaps = 30/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 76 LRHYRVQMIGGIVLHQGRIAEMKTGEGKTLVATAPVYLNALTGKGVHVVTVNDYLAKRDR 135
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLG+SVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ V
Sbjct: 136 DQMAKIYEFLGMSVGVIIHGQNPKVRKEQYDCDITYGTNNEYGFDYLKDNMVIHKEQRVQ 195
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L ++ Y +E K
Sbjct: 196 RG---LNYAIVDEVDSILIDEARTPLIISGPGDKSTHLYSDANTFV-LTLKPDDYELEEK 251
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LT GI AE+ +++ D + + AL+A ++DV Y+ ++G+ +I
Sbjct: 252 DKAVSLTASGIQKAEVYFNVDNITDISHTELYHHINQALRAHVIMKKDVDYVAKDGEIVI 311
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGLKIQ +S +A +T+Q+ F++Y KLSGMTGTAK
Sbjct: 312 VDEFTGRLMFGRRYSEGLHQAIEAKEGLKIQRESKTLATVTFQNYFRMYKKLSGMTGTAK 371
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN IR DLP + + GK+ QE+ ++ +P+LVG
Sbjct: 372 TEEEEFKAIYKMDVFQVPTNKLMIREDLPDCVYKSEIGKFNAVAQEIIERHKVNQPILVG 431
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GI H VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 432 TVSIEKSELLSQILKKKGIKHEVLNA--KHHDKEAEIIAQAGRLGAVTIATNMAGRGTDI 489
Query: 397 ILGGNPKMLAKK 408
+LGGNP L K+
Sbjct: 490 VLGGNPDFLTKR 501
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 4/141 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGRAGRQGDPGS+RF + L D++ + F D + + +
Sbjct: 560 GGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIGLDDDLMRLFGSDRISGI--VDK 617
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
I +EDMPIE + + + G Q E FGIRK ++++D+V+ QR+ +Y R+ +L G
Sbjct: 618 IGLEEDMPIEHRILSKSIEGAQKKVEGKNFGIRKHVLQYDDVMNKQREIIYAERKRVLEG 677
Query: 655 ANESCSQQIFQYMQAVVDEII 675
E +QI ++++E +
Sbjct: 678 --EDLQEQIQSMTHSIIEEAV 696
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++ +D W DH+ M++L + +R+ G ++P+ YK++G F M
Sbjct: 761 MREVERVILLQAVDNHWIDHIDAMDQLRQGIGLRAVGQQDPVIAYKMEGFDMFDEMNKHI 820
Query: 867 RRLTVESLVQYW-SSPMESQ 885
+ TV L +P+E +
Sbjct: 821 KEDTVRYLFNITIETPVERK 840
>gi|334127092|ref|ZP_08501022.1| preprotein translocase subunit SecA [Centipeda periodontii DSM
2778]
gi|333390054|gb|EGK61206.1| preprotein translocase subunit SecA [Centipeda periodontii DSM
2778]
Length = 881
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 275/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEM+T +VTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGICLHEGRIAEMRTGEGKTLVATTAVYLNALEGKGVHMVTVNDYLARRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI M ER++ Y D+T+ N+E GFDYLRDN+ + Q+V
Sbjct: 143 EWMGKLYRYLGLSVGLIAHNMDFPERKAAYAADVTFGTNNEFGFDYLRDNMVLSEGQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AIVDEVDS+LIDE R PL+ISG +K Y V A+ L +G YTV+ K
Sbjct: 203 R---PLHYAIVDEVDSILIDEARTPLIISGPGTKSTDNYRVMAEAVRHLKEGEDYTVDEK 259
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + + E + +L+ EN + AL+AK RD Y+V+ + +I
Sbjct: 260 QKTVAPADSAVPKIEKIVGITNLYAPENIELSHCFTAALRAKALMHRDRDYVVKGDEIVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KIQ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIQRESQTLASITFQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EFLK++ +PVI +PTN P R+D + T K+ V+ + G+P+L+G
Sbjct: 380 TEENEFLKIYNLPVIVIPTNKPIQRIDEADVIYKTKAAKYRAVGNAVKEIHETGQPILIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S +LK+ GIPH VLNA K+ +EAE VA AG+K A+TI+TNMAGRGTDI
Sbjct: 440 TTSITQSEEMSHVLKKNGIPHVVLNA--KFHEKEAEIVANAGQKGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 4/169 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL+++GT HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F+ D
Sbjct: 500 GEGVEALGGLYIVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRLFASDRIA 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + R+ +ED PIE I R + Q E F IRK ++E+D+V+ QR+ +Y
Sbjct: 560 GI--MDRLGMEEDEPIEHAIITRSIEHAQKKVEARNFDIRKHVLEYDDVMNQQREVIYGE 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
R+ IL G E+ + I ++ ++ + + + +P W LD L+++
Sbjct: 618 RRKILKG--ENLRENILAMVKHIIKDEMTQYANEKLYPEEWQLDALIED 664
>gi|126697715|ref|YP_001086612.1| protein translocase subunit SecA1 [Clostridium difficile 630]
gi|255099303|ref|ZP_05328280.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-63q42]
gi|255305088|ref|ZP_05349260.1| preprotein translocase SecA subunit [Clostridium difficile ATCC
43255]
gi|123174682|sp|Q18CN0.1|SECA1_CLOD6 RecName: Full=Protein translocase subunit SecA 1
gi|115249152|emb|CAJ66963.1| Protein translocase subunit SecA1 [Clostridium difficile 630]
Length = 891
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/432 (47%), Positives = 281/432 (65%), Gaps = 30/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 LRHYRVQMIGGIVLHQGRIAEMKTGEGKTLVATAPVYLNALTGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLG+SVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ V
Sbjct: 139 DQMAKIYEFLGMSVGVIIHGQNPKVRKEQYDCDITYGTNNEYGFDYLKDNMVIHKEQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L ++ Y +E K
Sbjct: 199 RG---LNYAIVDEVDSILIDEARTPLIISGPGDKSTHLYSDANTFV-LTLKPDDYELEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LT GI AE+ +++ D + + AL+A ++DV Y+ ++G+ +I
Sbjct: 255 DKAVSLTASGIQKAEVYFNVDNITDISHTELYHHINQALRAHVIMKKDVDYVAKDGEIVI 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGLKIQ +S +A +T+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSEGLHQAIEAKEGLKIQRESKTLATVTFQNYFRMYKKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN IR DLP + + GK+ QE+ ++ +P+LVG
Sbjct: 375 TEEEEFKAIYKMDVFQVPTNKLMIREDLPDCVYKSEIGKFNAVAQEIIERHKVNQPILVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GI H VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSQILKKKGIKHEVLNA--KHHDKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLAKK 408
+LGGNP L K+
Sbjct: 493 VLGGNPDFLTKR 504
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 4/141 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGRAGRQGDPGS+RF + L D++ + F D + + +
Sbjct: 563 GGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIGLDDDLMRLFGSDRISGI--VDK 620
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
I +EDMPIE + + + G Q E FGIRK ++++D+V+ QR+ +Y R+ +L G
Sbjct: 621 IGLEEDMPIEHRILSKSIEGAQKKVEGKNFGIRKHVLQYDDVMNKQREIIYAERKRVLEG 680
Query: 655 ANESCSQQIFQYMQAVVDEII 675
E +QI ++++E +
Sbjct: 681 --EDLQEQIQSMTHSIIEEAV 699
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++ +D W DH+ M++L + +R+ G ++P+ YK++G F M
Sbjct: 764 MREVERVILLQAVDNHWIDHIDAMDQLRQGIGLRAVGQQDPVIAYKMEGFDMFDEMNKHI 823
Query: 867 RRLTVESLVQYW-SSPMESQ 885
+ TV L +P+E +
Sbjct: 824 KEDTVRYLFNITIETPVERK 843
>gi|386840554|ref|YP_006245612.1| preprotein translocase subunit SecA [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374100855|gb|AEY89739.1| preprotein translocase subunit SecA [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451793848|gb|AGF63897.1| preprotein translocase subunit SecA [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 936
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/450 (46%), Positives = 289/450 (64%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGDGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLSVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+LIDE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADQATKWYGDFAKLVTRLKRGEAGNPLKGV 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G++ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYDVDEKKRTVAIHESGVSKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+E ++
Sbjct: 377 KKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNKPMVRKDQSDLIYRTEVAKFEAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K+ REA+ VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KHHEREAQIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP+ LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPEDLAEAELRQRGL 524
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
S L+ E E EV+ LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 SALEKAEQAVKAEKEEVEALGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQAQVETQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +Q+ +M ++ + P W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLHEQVRHFMDDTIEAYVRAETSE-GFPEDWDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WGAF 716
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMDGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|255654234|ref|ZP_05399643.1| preprotein translocase SecA subunit [Clostridium difficile
QCD-23m63]
gi|296452519|ref|ZP_06894216.1| preprotein translocase subunit SecA [Clostridium difficile NAP08]
gi|296881069|ref|ZP_06905012.1| preprotein translocase subunit SecA [Clostridium difficile NAP07]
gi|296258624|gb|EFH05522.1| preprotein translocase subunit SecA [Clostridium difficile NAP08]
gi|296427935|gb|EFH13839.1| preprotein translocase subunit SecA [Clostridium difficile NAP07]
Length = 891
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/432 (47%), Positives = 281/432 (65%), Gaps = 30/432 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+ VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 LRHYRVQMIGGIVLHQGRIAEMKTGEGKTLVATAPVYLNALTGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLG+SVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ V
Sbjct: 139 DQMAKIYEFLGMSVGVIIHGQNPKVRKEQYDCDITYGTNNEYGFDYLKDNMVIHKEQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+LIDE R PL+ISG K Y A L ++ Y +E K
Sbjct: 199 RG---LNYAIVDEVDSILIDEARTPLIISGPGDKSTHLYSDANTFV-LTLKPDDYELEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LT GI AE+ +++ D + + AL+A ++DV Y+ ++G+ +I
Sbjct: 255 DKAVSLTASGIQKAEVYFNVDNITDISHTELYHHINQALRAHVIMKKDVDYVAKDGEIVI 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKEGLKIQ +S +A +T+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSEGLHQAIEAKEGLKIQRESKTLATVTFQNYFRMYKKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN IR DLP + + GK+ QE+ ++ +P+LVG
Sbjct: 375 TEEEEFKAIYKMDVFQVPTNKLMIREDLPDCVYKSEIGKFNAVAQEIIERHKVNQPILVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GI H VLNA K+ +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSQILKKKGIKHEVLNA--KHHDKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLAKK 408
+LGGNP L K+
Sbjct: 493 VLGGNPDFLTKR 504
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 4/141 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGRAGRQGDPGS+RF + L D++ + F D + + +
Sbjct: 563 GGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIGLDDDLMRLFGSDRISGI--VDK 620
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
I +EDMPIE + + + G Q E FGIRK ++++D+V+ QR+ +Y R+ +L G
Sbjct: 621 IGLEEDMPIEHRILSKSIEGAQKKVEGKNFGIRKHVLQYDDVMNKQREIIYAERKRVLEG 680
Query: 655 ANESCSQQIFQYMQAVVDEII 675
E +QI ++++E +
Sbjct: 681 --EDLQEQIQSMTHSIIEEAV 699
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++ +D W DH+ M++L + +R+ G ++P+ YK++G F M
Sbjct: 764 MREVERVILLQAVDNHWIDHIDAMDQLRQGIGLRAVGQQDPVIAYKMEGFDMFDEMNKHI 823
Query: 867 RRLTVESLVQYW-SSPMESQ 885
+ TV L +P+E +
Sbjct: 824 KEDTVRYLFNITIETPVERK 843
>gi|380303015|ref|ZP_09852708.1| protein translocase subunit secA [Brachybacterium squillarum M-6-3]
Length = 987
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/439 (48%), Positives = 283/439 (64%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G IAEMKT +VTVNDYLA ++
Sbjct: 81 RPYDVQVMGGAALHRGRIAEMKTGEGKTLVATLPAYLNALAGKGVHIVTVNDYLASYQSD 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV R LGLS G+I+ GM P ERR Y CDITY N+E GFDYLRDN+A + ++ V R
Sbjct: 141 LMGRVFRALGLSTGVIKAGMTPAERREQYACDITYGTNNEFGFDYLRDNMAHSPDERVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
FAIVDEVDS+LIDE R PL+ISG AS D + Y AKV L + Y V+ K
Sbjct: 201 G---HFFAIVDEVDSILIDEARTPLIISGPASGDANKWYSEFAKVVTKLRRDRDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E L +L++ N P F+ NA+KAKE +++D Y+V NG+ +I
Sbjct: 258 KRTVGVLETGIDQVEDHLGIENLYESLNTPLIGFLNNAIKAKELFKKDKDYVVLNGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+KI+A++ +A IT Q+ FKLY KLSGMTGTA+
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVKIKAENQTLATITLQNYFKLYEKLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF+ + + V+ +PT+ P R D P + + T + K++ +++ G+PVLVG
Sbjct: 378 TEAAEFMNTYDLGVVPIPTHRPMQREDQPDRIYRTEKAKFDAVVEDIVERHDRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SEYL+ LK +G+PH VLNA K A EA +A AG K A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSEYLATQLKGKGVPHEVLNA--KNHAAEAGIIAMAGAKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + +A +E R L
Sbjct: 496 MLGGNVEFMAHAALEARGL 514
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 106/164 (64%), Gaps = 8/164 (4%)
Query: 517 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDE 576
L+ + + + EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD+
Sbjct: 531 LERAKESVAEQHDEVTELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDD 590
Query: 577 MFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEV 636
+ + F++ A L++R DE +P+ G + R + Q S E IRK+++++D+V
Sbjct: 591 LMR--LFNSGAASSLLARGGVDESIPLTGRMVSRAIQSAQNSIESRNAEIRKNVLKYDDV 648
Query: 637 LEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
L QRK +Y+ R +L G +++ ++++A V+E+I G VD
Sbjct: 649 LTKQRKKLYEERARVLEG------EELDEHVEAFVEEVIGGTVD 686
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+ +++R VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M++
Sbjct: 758 LHQLQRRVLLSVMDRRWREHLYEMDYLKEGIGLRAMAQRDPLVEYEREGHLMFNDMVAGI 817
Query: 867 RRLTV 871
+ TV
Sbjct: 818 KEDTV 822
>gi|414153401|ref|ZP_11409728.1| Protein translocase subunit SecA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455783|emb|CCO07631.1| Protein translocase subunit SecA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 824
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/434 (46%), Positives = 290/434 (66%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ++GG LH G++AEMKT VVTVNDYLA RD
Sbjct: 79 LRHYDVQLLGGLALHQGAVAEMKTGEGKTLAATLPVYLNALTGEGVHVVTVNDYLADRDY 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM ++RFLGLSVGL+ +G+ PE+RR Y DITY + E DYLRD+L QLV
Sbjct: 139 RWMAPLYRFLGLSVGLVVQGLPPEQRRRAYGADITYGTHKEFAVDYLRDHLVLQPSQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FA++DEVD +L+D+ R P+ ISG A + Y K+ L + +HY + K
Sbjct: 199 RQ---LNFALLDEVDCILLDDARTPIGISGGAEQPSDLYYQTDKLVAGLTRDVHYVTDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTEEG+A E L ++L+DE + +N +LKA+ +R+V Y+VR G+A+I
Sbjct: 256 SRTVTLTEEGVAYLEEQLGLDNLYDEANINLNHHLNQSLKARYLLQRNVHYVVREGQAVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E++GR+ RR+S+G+HQA+EAKEGL I+ +S ++A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 316 VDEISGRLLFGRRFSDGLHQALEAKEGLPIRPESRLLATITFQNYFRMYKKLAGMTGTAR 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
+E E +++ +PV+E+PT+ P IR DLP + T K+ +E+ + + G+PVLVG
Sbjct: 376 SEAAELQQVYGLPVVEIPTHKPMIRQDLPDVIYKTEAVKFRQVVEEIANRHQTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S LLK++GIPH VLNAR + +EAE +AQAGR A+TI+TNMAGRG DI
Sbjct: 436 TTSIAKSEVISALLKRRGIPHRVLNAR--HHEQEAEIIAQAGRLRAVTIATNMAGRGVDI 493
Query: 397 ILGGNPKMLAKKII 410
+LGGNP++LA+ +
Sbjct: 494 LLGGNPEVLAQTAL 507
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 4/189 (2%)
Query: 506 GPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPG 565
G Y ++L+ C E +V +LGGLH+IGT HESRRID+QLRGRAGRQGDPG
Sbjct: 514 GAAAQEAYQALLEQFTGQCEAERQQVVQLGGLHIIGTERHESRRIDDQLRGRAGRQGDPG 573
Query: 566 STRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFG 625
S+RF +SL+D + + F+ D L+ R+ +E+ PIE + R + Q E F
Sbjct: 574 SSRFFLSLEDNLLRLFAAD--HVAGLMERLGMEEEAPIESTLVTRAIETAQKRLESQNFN 631
Query: 626 IRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
+RK ++E+D+VL QR+ +Y R+ +L GA + + + Q ++ VV + HP
Sbjct: 632 MRKHVLEYDDVLHRQRQVIYRQRRQVLEGAQPADT--VRQIIRDVVQRSVEFYCPEGVHP 689
Query: 686 RYWSLDKLL 694
W L LL
Sbjct: 690 EEWDLAGLL 698
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
++E ER ++++ +D W +HL M +L + +R++G++NPL EYK + R F M++
Sbjct: 748 LREAERLLMLQLVDKHWLEHLAAMEQLRQGIGLRAYGNKNPLMEYKYETHRMFNHMIA 805
>gi|420152923|ref|ZP_14659930.1| preprotein translocase, SecA subunit [Actinomyces massiliensis
F0489]
gi|394762865|gb|EJF45041.1| preprotein translocase, SecA subunit [Actinomyces massiliensis
F0489]
Length = 972
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/433 (50%), Positives = 277/433 (63%), Gaps = 32/433 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQI+GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 79 MRPFHVQIMGGAALHLGNIAEMKTGEGKTLVATMPSFLRALTGKGVHVVTVNDYLAEYQS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RVHRFLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 DLMGRVHRFLGLTTGCILTGQTPAERRKQYACDITYGTNNEFGFDYLRDNMAQRPEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG A+ DV + Y AK+AE L G Y V+
Sbjct: 199 RG---HAFVIVDEVDSILIDEARTPLIISGPATGDVNKWYKEFAKMAERLRAGKDYEVDE 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + GI E L ++L++ EN P F+ NA+KAKE ++ D YIVR+G+ L
Sbjct: 256 KKRTVGVLSPGIERVEDYLGIDNLYESENTPLIGFLNNAIKAKELFQLDKDYIVRDGEVL 315
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 316 IVDEHTGRVLPGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 375
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + K ++ G+PV
Sbjct: 376 TAETEAAEFAGTYKIGVVPIPTNKPMIRKDQPDLVYTNVAAKLTAVVDDISERHEAGQPV 435
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SE LS LL ++ IPH VLNA K AREA VA AGRK A+T++TNMAGRG
Sbjct: 436 LVGTTSVEKSEQLSALLSERKIPHQVLNA--KQHAREAAVVAMAGRKGAVTVATNMAGRG 493
Query: 394 TDIILGGNPKMLA 406
TDI+LGGN + +A
Sbjct: 494 TDIMLGGNAEHIA 506
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 175/362 (48%), Gaps = 57/362 (15%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ LK + C E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S++
Sbjct: 530 AALKAAQDACKAEHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSME 589
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F+ ++ A +++ +D ++P+E + R + Q E + IRK+++++D
Sbjct: 590 DDLMRMFA--SNAAQRIMASDVHDNNVPLESKVVTRAIASAQRQIESRNYEIRKNVLKYD 647
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+V+ QR+ VYD R +L G E Q+ + V II G + W LD L
Sbjct: 648 DVMTEQREKVYDERHRVLKG--EDLEPQVEAFRSQAVGAIIAGRTAEGRSDE-WDLDALW 704
Query: 695 KEFIAIAGKILDDLF-AGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRK 753
+ L L+ G++ D L+ ++ L L S R
Sbjct: 705 ND--------LGHLYPVGLTRDELVDAVGGLDRLTS---------------------ERL 735
Query: 754 SSSLKRWLAICSDDLTKNGRYRATTN-LLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
S L +A+ +D + R N L R LG D M+ +ER
Sbjct: 736 SVELSEDVAVAYEDAER----RMNDNPLARTQLG-----------------DEPMRTLER 774
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE 872
VL+ +D WR+HL M+ L + +R+ R+PL EY +G F +M+ R T+E
Sbjct: 775 RVLLAVVDKRWREHLYEMDYLKEGIGLRAMAQRDPLVEYANEGAHMFKAMMEGIREETIE 834
Query: 873 SL 874
+
Sbjct: 835 QI 836
>gi|398382969|ref|ZP_10541046.1| preprotein translocase, SecA subunit [Sphingobium sp. AP49]
gi|397725679|gb|EJK86127.1| preprotein translocase, SecA subunit [Sphingobium sp. AP49]
Length = 914
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/434 (47%), Positives = 278/434 (64%), Gaps = 36/434 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA RD
Sbjct: 81 MRHFDVQMIGGIVLHRGEIAEMRTGEGKTLVATLATYLNALEGKGVHVVTVNDYLASRDC 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGL+ G+I + ++RR Y DITY N+ELGFDYLRDN+ + +V
Sbjct: 141 EWMGQIYRFLGLTTGVIVPNLSEDQRREAYNADITYATNNELGFDYLRDNMKYDRASMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+ AIVDEVDS+LIDE R PL+ISG + D + VA + Y + K
Sbjct: 201 R---PFNHAIVDEVDSILIDEARTPLIISG-PTDDKSELYVAVDAIVKQMNDADYEKDEK 256
Query: 158 NNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
+V LTE+G E LET N+L+D EN V AL+A +RRD+ YIV+
Sbjct: 257 QRTVTLTEDGTEKIERLLETAGLLQGNNLYDFENTQVVHHVNQALRAVVMFRRDIDYIVK 316
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +II+E TGR+ + RRWS+G+HQAVEAKEG+ I+ ++ +A +T+Q+ F++YPK+SG
Sbjct: 317 DGKVVIIDEFTGRMMDGRRWSDGLHQAVEAKEGVNIEPENQTLASVTFQNYFRMYPKISG 376
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF ++++M V+ +PTN P R+D + K+ + ++ +G
Sbjct: 377 MTGTASTEATEFYEIYKMNVVTIPTNKPVQRIDEEDSFYKNLEDKFRGIAKTIKVHAEIG 436
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+ S+E SE LS+ L Q+G+ H VLNAR + REA VAQAGRK A+TI+TNMA
Sbjct: 437 QPVLVGTVSIEKSEMLSEFLNQEGVKHAVLNAR--FHEREAHIVAQAGRKGAVTIATNMA 494
Query: 391 GRGTDIILGGNPKM 404
GRGTDI LGGN +M
Sbjct: 495 GRGTDIQLGGNLEM 508
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +EV GGL V+ T HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F DT
Sbjct: 537 EKAEVLAAGGLFVLATERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLMRIFGPDTM 596
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+A + S + + E +P + + + Q E + IRK +VE+D+V+ QRK +Y+
Sbjct: 597 FAKMIRSNLEDGEALP-PSKWLSKAIETAQRKVEARNYDIRKQVVEYDDVMNDQRKVIYE 655
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
R I+ +++ + V++++ + P +P W ++ L AI G
Sbjct: 656 QRADIMD--SQTVDDVVIDMRHETVNDLVGASCPPGSYPEQWDMETLKARTAAILG 709
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
++ + L + A+ + +Q+ D +M +E+++L+++LD W++HL ++ L V++
Sbjct: 727 MIEQRLSALADATVADKIQDIDAADWHM--IEKSILLQSLDHHWKEHLSTLDALRQVVHL 784
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
R++ + P+ EYK + F ML R S+ +
Sbjct: 785 RAYAQKTPINEYKQEAFALFERMLENIREDVTGSIAR 821
>gi|421526169|ref|ZP_15972778.1| preprotein translocase subunit SecA [Fusobacterium nucleatum ChDC
F128]
gi|402257928|gb|EJU08401.1| preprotein translocase subunit SecA [Fusobacterium nucleatum ChDC
F128]
Length = 882
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGMVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSFETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ +L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEEILKIENLYAPEYVELTHFLHQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 152/343 (44%), Gaps = 69/343 (20%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D++ + F
Sbjct: 550 QCKEEKEKVLSLGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLEDDLMRLFG 609
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ + + R+ E PI I + Q E FGIRK+L+EFD+V+ Q
Sbjct: 610 --SERVMVWMDRLKLPEGEPITHGMINSAIEKAQKKIEARNFGIRKNLLEFDDVMNKQ-- 665
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
R +I NE+ + +D LK
Sbjct: 666 -----RTAIYESRNEALA------------------IDNLKD------------------ 684
Query: 703 KILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
+IL L I+ K E+ E ID N Y D ++
Sbjct: 685 RILGMLQRNITEKVYEKFAPEMREDWDIDGLNEYLKDF-------------------YVY 725
Query: 763 ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCF 822
DD R+T + + + L+ Y N +E+ M+++E+ +L +D
Sbjct: 726 EEEDD---KAYLRSTKEEYAERVYNALVEQYNN--KEAELGSDLMRKLEKHILFDVVDNR 780
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 781 WRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|333372655|ref|ZP_08464579.1| preprotein translocase subunit SecA [Desmospora sp. 8437]
gi|332971717|gb|EGK10665.1| preprotein translocase subunit SecA [Desmospora sp. 8437]
Length = 850
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ++GG LH G+IAEMKT VVTVNDYLA+RD
Sbjct: 83 MRHFYVQLVGGIALHQGNIAEMKTGEGKTLVSTLPTYLNALPGEGAHVVTVNDYLARRDR 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V FLGL VGL M PEE+R Y+ DIT+ N+E GFDYLRDN+ EQ+
Sbjct: 143 EWMGQVFEFLGLKVGLNLPDMGPEEKREAYQADITFGTNNEFGFDYLRDNMVLYPEQITQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFA++DEVDS+LIDE R PL+ISG+A+K Y A K+ L YTV++K
Sbjct: 203 R---KLHFALIDEVDSILIDEARTPLIISGQANKATDLYYTADKLVRRLKPEEDYTVDIK 259
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE+G+ AE +L+D +N + ALKA +RD Y+V +I
Sbjct: 260 TKSVSLTEKGVDKAEAFTGVENLFDAKNITINHHIQQALKAHVIMKRDHDYVVNEDGVVI 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ RR+S+G+HQA+EAKEGL++Q +S+ +A IT Q+ F++Y KL+GMTGTAK
Sbjct: 320 VDDFTGRLMHGRRYSDGLHQAIEAKEGLQVQRESMTLATITLQNYFRMYDKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF K++ M VI++PT+ P IR D Q + T K+ +E+ + G+P+LVG
Sbjct: 380 TEEEEFRKIYGMNVIQIPTHRPMIRKDHTDQLYKTEEAKFRAVVEEIANRHATGQPMLVG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +LK++GIPH VLNA K A+EAE +A+AG++ A+TI+TNMAGRGTDI
Sbjct: 440 TVSIEKSEKLSKMLKKRGIPHQVLNA--KNHAKEAEIIAEAGQRGAVTIATNMAGRGTDI 497
Query: 397 ILG 399
+LG
Sbjct: 498 VLG 500
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS++F +S +D++ ++F +
Sbjct: 500 GEGVAELGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSQFYLSFEDDLMRRFGSERIQ 559
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + DED+PIEG R + Q E F R+ ++++D+VL QR +Y
Sbjct: 560 G--MMDSLGMDEDIPIEGKMFTRAVANSQKRVEGNNFDARRWVLQYDDVLNQQRDIIYKQ 617
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ +L G E+ I + ++ ++ + P W L+ +++
Sbjct: 618 RREVLNG--ENLRDAILNMGKELITRVVEAHTSDDDIPEEWDLEPVVE 663
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E + V ++T+D W DH+ M++L +++R++G +PL EY+ +G F M+
Sbjct: 712 LEEFIKVVTLRTVDRKWMDHIDAMDQLRQGIHLRAYGQTDPLREYQFEGFEMFQQMVEEI 771
Query: 867 RRLTVESLVQY 877
+ E LV+Y
Sbjct: 772 Q----EELVRY 778
>gi|291453749|ref|ZP_06593139.1| preprotein translocase subunit SecA [Streptomyces albus J1074]
gi|359149473|ref|ZP_09182483.1| preprotein translocase subunit SecA [Streptomyces sp. S4]
gi|421741066|ref|ZP_16179285.1| preprotein translocase, SecA subunit [Streptomyces sp. SM8]
gi|291356698|gb|EFE83600.1| preprotein translocase subunit SecA [Streptomyces albus J1074]
gi|406690528|gb|EKC94330.1| preprotein translocase, SecA subunit [Streptomyces sp. SM8]
Length = 938
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 288/450 (64%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGEGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHKFLGLSVGCIVANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R+D + T K++ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRMDQSDLIYRTEVAKFDAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K+ REA VAQAGR+ A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KHHEREASIVAQAGRRGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ E E VK GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 540 ALERAEASVKAEFEAVKDAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 599
Query: 576 EMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++D
Sbjct: 600 DLMRLFK---AAMVERVMAMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EVL QR+ +Y R+ +L G E+ +QI +M +D I W LD+L
Sbjct: 657 EVLNRQREVIYGERRRVLEG--ENLQEQIQHFMDDTIDAYIQAET-AEGFAEEWDLDRLW 713
Query: 695 KEF 697
F
Sbjct: 714 GAF 716
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T + + D + A Y +E + M+E+ER V++ LD WR+HL M+ L
Sbjct: 740 TAEFIADSIKDDIHAQY--AAREEQLGSEIMRELERRVVLSVLDRKWREHLYEMDYLQEG 797
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ ++PL EY+ +G F +M+ + +V
Sbjct: 798 IGLRAMAQKDPLVEYQREGFDMFTAMMEGIKEESV 832
>gi|347750935|ref|YP_004858500.1| preprotein translocase subunit SecA [Bacillus coagulans 36D1]
gi|347583453|gb|AEO99719.1| preprotein translocase, SecA subunit [Bacillus coagulans 36D1]
Length = 838
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 281/420 (66%), Gaps = 29/420 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQ++GG LH+G+IAEMKT VVTVN+YLA+RDAE M
Sbjct: 82 YHVQLMGGITLHEGNIAEMKTGEGKTLTATMPVYLNALSGKGVHVVTVNEYLAKRDAEEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++++FLGL+VGL M EE+++ Y DITY N+E GFDYLRDN+ EQ V R
Sbjct: 142 GKLYQFLGLTVGLNLTNMSNEEKQAAYAADITYGTNNEFGFDYLRDNMVLYQEQKVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA++DEVDS+LIDE R PL+ISG+A K A Y A L + YT ++K S
Sbjct: 200 -PLYFAVIDEVDSILIDEARTPLIISGQAEKSTALYTQANAFVRTLEKEKDYTYDVKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V LTE+GI AE ++L+D N + ALKA RDV Y+V++G+ +I+++
Sbjct: 259 VLLTEDGITKAEKYFHIDNLYDIRNVTINHHINQALKANVAMHRDVDYVVQDGEIIIVDQ 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRFSEGLHQAIEAKEGVEIQNESMTMATITFQNYFRMYAKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ ++++ LG+P+LVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPIIRDDRPDLIYKTMEGKFRAVVEDIKQRHDLGQPILVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE +S +LK++G+PHNVLNA K AREAE + QAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELISRMLKKKGVPHNVLNA--KNHAREAEIIKQAGQKGAVTIATNMAGRGTDIKLG 496
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GDGVVELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGSDNMK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 S--MMERLGMDDTQPIQSKMVSRAVESAQKRVEGNNFDARKQLLQYDDVLRQQREIIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +LT N + + + +++VV+ ++ N + W+L ++
Sbjct: 614 RDEVLTADN--LREIVEKMIRSVVERVVNANAPLHEDEEEWNLQGIV 658
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E E+ +L++++D W DH+ M+ L +++R++G +PL EY+ +G F +M+++
Sbjct: 708 MREFEKVILLRSVDSKWIDHIDAMDHLREGIHLRAYGQIDPLREYQSEGFAMFENMVASI 767
Query: 867 RRLTVESLVQY-WSSPMESQEL 887
T + +++ + +E QE+
Sbjct: 768 EEDTAKYIMKAEIQTNLERQEV 789
>gi|430745898|ref|YP_007205027.1| Preprotein translocase subunit SecA [Singulisphaera acidiphila DSM
18658]
gi|430017618|gb|AGA29332.1| preprotein translocase, SecA subunit [Singulisphaera acidiphila DSM
18658]
Length = 1207
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 273/430 (63%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++G VLH G+IAEM T VVTVNDYLA+RDA
Sbjct: 101 MRHYDVQLMGAMVLHGGNIAEMVTGEGKTLVATLAAYLNALEGRGVHVVTVNDYLARRDA 160
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM + LG++VG IQ M EER+ Y CD+TY N+E GFDYLRDN+ E +
Sbjct: 161 EWMTPLFSGLGMTVGAIQSDMDAEERQRIYGCDVTYGTNNEFGFDYLRDNMKPTKE---L 217
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
+ P H+AI+DEVDS+LIDE R PL+ISG A DV +Y A ++A LL + H+ V+ K
Sbjct: 218 QSQGPLHYAIIDEVDSILIDEARTPLIISGPAFDDVRKYAEADRIARLLRKDTHFEVKEK 277
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ L ++G+ AE + N W + N+LKA Y+RD Y+ NG+ +I
Sbjct: 278 ERTCHLNDDGVREAERIAGIESFYTPGNMEWPHLIDNSLKAHYLYKRDRDYVEMNGEIVI 337
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ R+WS+G+HQAVEAKE +KI+ ++ +A IT Q+ FKLY KLSGMTGTA
Sbjct: 338 VDEFTGRLMTGRQWSDGLHQAVEAKERVKIKEENQTLATITLQNFFKLYKKLSGMTGTAM 397
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ +PTN R + + K+ E+ + GRP+LVG
Sbjct: 398 TEANEFYKVYHLDVVAIPTNRALTRESYSDVIYRSDSEKFGAILNEIREIHAKGRPILVG 457
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE L+D+L++ GI H VLNA KY REAE VAQAGRK A+TI+TNMAGRGTDI
Sbjct: 458 TTSIEKSEELADMLRRHGIEHQVLNA--KYHEREAEIVAQAGRKGAVTIATNMAGRGTDI 515
Query: 397 ILGGNPKMLA 406
ILGGNP+ +A
Sbjct: 516 ILGGNPEFMA 525
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
Query: 487 MNLKELQKLIDKQS-AMYPLGPTVAL-TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSL 544
M +L++L D+ +YP V+ + + E EG EV LGGLH+IGT
Sbjct: 524 MAWADLKRLNDEDGRPLYPTRLEVSPEIWTEAVHKYEPVMKAEGREVAGLGGLHIIGTER 583
Query: 545 HESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIE 604
HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ +KF+ + W +++R+ +E IE
Sbjct: 584 HESRRIDNQLRGRAGRQGDPGSSRFFLSLEDDLMRKFAGE--WVSAVLTRLGMEEGEAIE 641
Query: 605 GDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ R++ G Q E+ F RK+L+E+DEV++ QRK +Y RQ +L G
Sbjct: 642 SRLVSRRIEGAQKKVEERNFDSRKNLLEYDEVMDEQRKRIYSFRQRLLDG 691
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
M+E+E+ ++++ LD W +HL M+ L S+V ++ + +P EYK G + F M
Sbjct: 1040 MREMEKVLVLQILDSSWMEHLRAMDHLRSSVGLQGYAQIDPKVEYKRVGMKIFSEM 1095
>gi|164687097|ref|ZP_02211125.1| hypothetical protein CLOBAR_00723 [Clostridium bartlettii DSM
16795]
gi|164603982|gb|EDQ97447.1| preprotein translocase, SecA subunit [Clostridium bartlettii DSM
16795]
Length = 908
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/449 (45%), Positives = 280/449 (62%), Gaps = 46/449 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH++VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 LRHYNVQLIGGMVLHQGRIAEMKTGEGKTLVATAPVYLNALEGKGVHVVTVNDYLAKRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +V+ FLGL+VG+I G PE RR Y CDITY N+E GFDYL+DN+ + EQ V
Sbjct: 139 EEMGKVYEFLGLTVGVIVHGQNPEVRRKQYECDITYGTNNEYGFDYLKDNMVIHKEQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-----------------A 140
R ++AIVDEVDS+LIDE R PL+ISG K Y A
Sbjct: 199 R---ELNYAIVDEVDSILIDEARTPLIISGPGDKSTHLYTDANTFVLTLKRPSKTQQEKT 255
Query: 141 KVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKE 199
+ + L Y ++ K +V L+E GI AE+ ++ D E+ + ALKA
Sbjct: 256 EEEKELPSDGDYEIDEKQKAVSLSESGIKKAELYFNVENITDVEHTELFHHINQALKAHA 315
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
++DV Y+ ++G+ +I++E TGR+ RR+SEG+HQA+EAKEGL +Q +S +A IT+Q
Sbjct: 316 IMKKDVDYVAKDGEIVIVDEFTGRLMFGRRYSEGLHQAIEAKEGLHVQRESKTLATITFQ 375
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F++Y KL+GMTGTAKTEE+EF +++M V+++PTN P IR DLP + GK+
Sbjct: 376 NFFRMYSKLAGMTGTAKTEEEEFKSIYKMDVVQIPTNKPVIRQDLPDVVYKNEHGKFHAV 435
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
+++ + +PVLVG+ S+E SE LS +LK++G+ H VLNA K +EAE +AQAGR
Sbjct: 436 AEDIMERHKKNQPVLVGTVSIEKSELLSQILKRKGVKHEVLNA--KNHEKEAEIIAQAGR 493
Query: 380 KYAITISTNMAGRGTDIILGGNPKMLAKK 408
A+TI+TNMAGRGTDI+LGGNP L KK
Sbjct: 494 LGAVTIATNMAGRGTDIMLGGNPLFLTKK 522
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 95/153 (62%), Gaps = 8/153 (5%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ E EVK GGL +IGT HESRRIDNQLRGR+GRQGDPGS+RF + L D++ + F
Sbjct: 569 QAAKEQEEVKAAGGLAIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYIGLDDDLMRLFG 628
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
D V + RI ++DMPIE + + + Q E FGIRK ++++D+V+ QR+
Sbjct: 629 SDRIKGV--VERIGLEDDMPIEHKMLTKSIENAQKKVEGRNFGIRKHVLQYDDVMNKQRQ 686
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+Y R S+L G + I +Y+Q++V + I
Sbjct: 687 VIYAERSSVLEG------EDIHEYIQSMVKDRI 713
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER +L++ +D W DH+ M++L + +R+ G ++P+ YK++G F M+
Sbjct: 782 MREIERIILLQCVDNHWIDHIDAMDQLRQGIGLRALGQQDPVIAYKLEGFNMFDEMVDQI 841
Query: 867 RRLTVESL--VQYWSSPMESQEL 887
R+ TV L + P E +++
Sbjct: 842 RQDTVRYLFGITIEKQPTERKQI 864
>gi|336324533|ref|YP_004604500.1| protein translocase subunit secA [Flexistipes sinusarabici DSM
4947]
gi|336108114|gb|AEI15932.1| Protein translocase subunit secA [Flexistipes sinusarabici DSM
4947]
Length = 860
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/446 (45%), Positives = 284/446 (63%), Gaps = 45/446 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG V+H G IAEMKT +VTVNDYLA+RDA
Sbjct: 81 LRHFDVQLIGGYVMHKGKIAEMKTGEGKTLVATLSLYLNGIESKGAHLVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQ----------------RGMIPEERRSNYRCDITYTNNSELGF 81
WM ++ FLGL+VG+IQ ++P ER+ Y CDITY N+E GF
Sbjct: 141 AWMGPIYLFLGLTVGVIQPDKSFYVDWDDKENFTTKLVPCERKQAYDCDITYGTNNEFGF 200
Query: 82 DYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK 141
DYLRDN+ + V R ++AIVDEVDS+LIDE R PL+ISG + +Y
Sbjct: 201 DYLRDNMKYDFSDYVQR---DLNYAIVDEVDSILIDEARTPLIISGPTEESTDKYYTINA 257
Query: 142 VAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
V + L HYT++ K + LT++GI+ E AL +L+D N FV NALKA
Sbjct: 258 VVKNLKNEDHYTIQEKEKTASLTDKGISYVEKALGVENLYDIRNIDTLHFVNNALKAHAV 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+++DV Y+V+NG+ +I++E TGR+ RR+S+G+HQA+EAKEG++I++++ +A IT+Q+
Sbjct: 318 FKKDVDYVVQNGEVIIVDEFTGRLMPGRRYSDGLHQALEAKEGVQIESENQTLASITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA+TE EF++++ + VI VPT++P IR D P Q + T K++
Sbjct: 378 YFRMYNKLAGMTGTAETEAGEFIQIYSLDVIVVPTHMPMIRKDYPDQIYRTLDEKYKAIS 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
+E++ M + GRPVLVG+ S+E SE LS LL + G+PH VLNA K REA VA+AG K
Sbjct: 438 REIDEMHKKGRPVLVGTVSIEKSEILSKLLSKLGVPHEVLNA--KNHEREATIVAKAGDK 495
Query: 381 YAITISTNMAGRGTDIILGGNPKMLA 406
A+TI+TNMAGRGTDI + K L
Sbjct: 496 GAVTIATNMAGRGTDIKINEEVKSLG 521
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKF-SFDTSWA 588
EVK LGGLH++G+ HESRR+DNQLRGR+GRQGDPGS+RF +SL+D++ + F S S+
Sbjct: 516 EVKSLGGLHIVGSERHESRRVDNQLRGRSGRQGDPGSSRFFLSLEDDLLRIFGSEKISY- 574
Query: 589 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
+++++ +E IE I R + Q E +F IRK L+E+D+V+ QR+ +Y LR
Sbjct: 575 --IMNKLGIEEGESIEHPMITRAIENAQKKVEAMHFEIRKHLLEYDDVMNQQRQIIYSLR 632
Query: 649 QSILTGAN 656
+ IL G +
Sbjct: 633 REILEGKD 640
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R +++ LD W+DHL++M+ L +V +R +G ++PL EYK + F+ M+ + TV
Sbjct: 724 RFLMMNVLDTKWKDHLLSMDYLRDSVGLRGYGQKDPLIEYKKESYNLFVGMMESIGFETV 783
Query: 872 ESLVQ 876
E +++
Sbjct: 784 EYMMR 788
>gi|237743295|ref|ZP_04573776.1| protein translocase subunit secA [Fusobacterium sp. 7_1]
gi|229433074|gb|EEO43286.1| protein translocase subunit secA [Fusobacterium sp. 7_1]
Length = 880
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 289/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALSGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ ++R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTDQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYSPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIINRIQRLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQRTTIYANRNQVLEIDN--LKDTIMEMLHKNITEKVYEKFA 703
Query: 681 PLKHPRYWSLD---KLLKEFIA 699
P + W +D K LK F A
Sbjct: 704 P-EMREDWDIDGLNKYLKNFYA 724
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 789 LIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
L+ Y N +E+ M+++E+ +L +D WR+HL +++ L ++ +R++G R+P+
Sbjct: 749 LVEQYNN--KEAELGSDLMRKLEKHILFDVVDNRWREHLKSLDALRESIYLRAYGQRDPV 806
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSS--PMESQE 886
EYK+ + F M++ + L + S P++ +E
Sbjct: 807 TEYKLISSQIFEEMIATIQEQATSFLFKVIVSTEPVKDEE 846
>gi|386846024|ref|YP_006264037.1| protein translocase subunit secA [Actinoplanes sp. SE50/110]
gi|359833528|gb|AEV81969.1| Protein translocase subunit secA [Actinoplanes sp. SE50/110]
Length = 970
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/443 (46%), Positives = 291/443 (65%), Gaps = 34/443 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G+I EMKT ++TVNDYLAQRDAE
Sbjct: 80 RAYDVQLMGGAALHFGNIPEMKTGEGKTLTGVFPAYLNALSGDGVHIITVNDYLAQRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
W+ RVH FLGL+VG+I E R+ Y+CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WVGRVHVFLGLTVGVILPNRPAAEHRAAYQCDITYGTNNEFGFDYLRDNMAWSRDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
+FAIVDEVDS+LIDE R PL+ISG A Y A + + L +G Y V
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPAEHSQRWYAEFAAIVKRLEKGKDGAGDYEV 256
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVR-NG 212
+ +V +TE G++ E + ++L++ N P ++ NA+KAKE Y+RD YIV G
Sbjct: 257 DEAKRTVAITERGVSRVEDRIGIDNLYESVNTPLVGYLNNAIKAKELYKRDKDYIVSPEG 316
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
+ LI++E TGR+ RR++EG+HQA+EAKEG++++ ++ +A +T Q+ F+LY KL GMT
Sbjct: 317 EVLIVDEFTGRILHGRRYNEGMHQAIEAKEGVEVKQENQTLATVTLQNYFRLYNKLGGMT 376
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA+TE EF ++++ V+ +PT+ P IRVD P + T + K+ +++ G+P
Sbjct: 377 GTAQTEAGEFNSVYKVGVVSIPTHRPMIRVDHPDVIYKTEKAKFSAVIEDIAERHATGQP 436
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+ SVENSE LS LL+++GIPH+VLNA K+ A+EA +AQAGRK A+T++TNMAGR
Sbjct: 437 VLVGTVSVENSEILSTLLRRRGIPHSVLNA--KFHAQEATIIAQAGRKGAVTVATNMAGR 494
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGN LA + + R L
Sbjct: 495 GTDILLGGNADFLAAQELAQRGL 517
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E +EV+ GGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SLQD
Sbjct: 533 VLPQVKEACEAEQAEVQAAGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLQD 592
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ ++F AV + R ED+PIE + RQ+ Q E IRK+++++DE
Sbjct: 593 DLMKRFRAGAVEAV--MERFNIPEDVPIESKMVTRQIRSAQTQIEAQNAEIRKNVLKYDE 650
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
V+ QR+ VY R+ +L G E +Q+ + V+ +++ + W L++L
Sbjct: 651 VMNKQRQVVYAERKRVLDG--EDMHEQVTHMIDDVITDVVHAATSD-GYAEDWDLEQL 705
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++E+ER VL+ +D WR+HL M+ L +++R++ R+P+ EY+ +G F M+
Sbjct: 762 VRELERQVLLAVIDRKWREHLYEMDYLQEGISLRAYAQRDPVVEYQREGFDMFNQMMEGI 821
Query: 867 RRLTV 871
+ V
Sbjct: 822 KEEAV 826
>gi|158522494|ref|YP_001530364.1| preprotein translocase subunit SecA [Desulfococcus oleovorans Hxd3]
gi|158511320|gb|ABW68287.1| preprotein translocase, SecA subunit [Desulfococcus oleovorans
Hxd3]
Length = 859
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/424 (49%), Positives = 279/424 (65%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA RDA
Sbjct: 97 MRHFDVQLIGGMVLHQGKIAEMKTGEGKTLAATLPVYLNALTGRGVHVVTVNDYLASRDA 156
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM ++ FLGLSVG+I GM ER++ Y DITY N+E GFDYLRDN+ S+ LV
Sbjct: 157 QWMGTIYTFLGLSVGVIVHGMDDAERKAAYGADITYGTNNEFGFDYLRDNMKFYSDSLVQ 216
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG A K Y A V L + YT++ K
Sbjct: 217 R---DLHYAIVDEVDSILIDEARTPLIISGPAEKSTTLYYQANTVIPALKEEDDYTIDEK 273
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGK-AL 215
SV LTE G+A AE A+ ++L+ EN V ALKA ++RDV YI+ + K +
Sbjct: 274 ARSVTLTEAGVAKAEKAMGVDNLYAPENVESLHHVNQALKAHTLFKRDVDYIITDEKEVV 333
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+SEG+HQA+EAKEG++I+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 334 IVDEFTGRLMPGRRFSEGLHQALEAKEGVRIENENQTLATITFQNYFRMYDKLAGMTGTA 393
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE +EF K++++ V+ +PTN+P +R D + T K+E E+ ++ G+PVLV
Sbjct: 394 DTEAEEFAKIYRLSVVVIPTNMPMVRTDFADVIYKTRAEKFEAVLDEIAALHEKGQPVLV 453
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S++ SE LS L+++GI H+VLNA K +EAE VA AG+K A+TISTNMAGRGTD
Sbjct: 454 GTVSIDVSELLSKKLQKRGIRHSVLNA--KRHRQEAEIVAAAGQKGAVTISTNMAGRGTD 511
Query: 396 IILG 399
I+LG
Sbjct: 512 IVLG 515
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ L GLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 515 GEGVRELDGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLLRIFGGDRMK 574
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + + + PIE I R + Q E + F IRK L+E+D+V+ QR +Y+
Sbjct: 575 RI--METLGMKDGDPIEHGMITRAIENAQKKVEGHNFEIRKHLIEYDDVMNEQRTVIYEQ 632
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ L E + + + DEI D P W LD L
Sbjct: 633 RRRALR--KEDLKEPVLDMIADKADEIAARYADKNALPDEWDLDGL 676
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER L++T+D W+DHL++M+ L + +R + +NPL YK + F M+
Sbjct: 727 MRELERIFLLQTVDALWKDHLLSMDHLKEGIGLRGYAQQNPLIIYKKEAFSMFQEMIERI 786
Query: 867 RRLTVESL 874
+ T+ L
Sbjct: 787 KEETLSIL 794
>gi|291541955|emb|CBL15065.1| protein translocase subunit secA [Ruminococcus bromii L2-63]
Length = 955
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 283/450 (62%), Gaps = 48/450 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG VLH G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 MKHFPVQIIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGEGVHIVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++R+LGLSVGLI + E R+ Y DITY N+ELGFDYLRDN+ E V
Sbjct: 139 EWMGKLYRYLGLSVGLICHDLDNEGRKKAYAADITYGTNNELGFDYLRDNMVVYKENKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL-VQ-------- 148
R P FAIVDEVDS+LIDE R PL+ISG+ K Y A A+ L VQ
Sbjct: 199 R---PHAFAIVDEVDSILIDEARTPLIISGKGDKSTDLYAKADAFAKTLKVQRFAELDAK 255
Query: 149 ----------GLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKA 197
+ Y V+ K + LT+ G+ AE +L D +N V A+KA
Sbjct: 256 EDMEEYYKENDIDYVVDEKQKTATLTQSGVKKAEEFFGIENLTDPDNLTIQHHVNQAIKA 315
Query: 198 KEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQIT 257
+ DV Y+V++G+ +I++E TGR+ RR++EG+HQA+EAKEG+K+Q++S +A IT
Sbjct: 316 NGVMKLDVDYVVKDGEVIIVDEFTGRLMYGRRFNEGLHQAIEAKEGVKVQSESKTLATIT 375
Query: 258 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWE 317
+Q+ F+LY KLSGMTGTA+TE +EF +++++ V+E+PTN P +R DLP + T GK+
Sbjct: 376 FQNYFRLYKKLSGMTGTAQTESEEFQEIYKLDVVEIPTNKPVLRKDLPDSVYKTENGKFH 435
Query: 318 YARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQA 377
+ G+PVLVG+ S+E SE LS +LK++GI HNVLNA K +EAE VAQA
Sbjct: 436 AVIDAIVEAHEKGQPVLVGTISIEKSELLSKMLKKRGIKHNVLNA--KQHEKEAEIVAQA 493
Query: 378 GRKYAITISTNMAGRGTDIILGGNPKMLAK 407
G+ A+TI+TNMAGRGTDIILGGN + +AK
Sbjct: 494 GKLGAVTIATNMAGRGTDIILGGNAEYMAK 523
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 169/353 (47%), Gaps = 73/353 (20%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ GGL+++GT HESRRIDNQLRGRAGRQGDPG +RF +S +D++ + F D
Sbjct: 571 EAEKVREAGGLYIMGTERHESRRIDNQLRGRAGRQGDPGVSRFFLSTEDDLMRLFGGDRM 630
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
++ R+ EDMPIE + + G Q E FGIRK ++++D+V+ QR
Sbjct: 631 KM--MMERMNVAEDMPIENKMLTSIIEGSQEKVELRNFGIRKDVLQYDDVMNKQR----- 683
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
EII+G D + + G+ L
Sbjct: 684 --------------------------EIIYGQRDQV-----------------LNGEDLH 700
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA--IC 764
+ + DT+ SI++ Y P+ P F+ SLK + A +
Sbjct: 701 ETILKMVEDTIATSIKQ------------YLPEGPAEHWNFQ-------SLKDYYAGWLI 741
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESR--YDDVYMKEVERAVLVKTLDCF 822
DD + ++ + + +L+ L + +E+ + ++E+ER L+K +D
Sbjct: 742 RDDSKYDFSLEDLEDMEPEEIQKMLVDDALEIYKENEELLPEETIREMERVYLLKNVDTH 801
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
W DH+ NM++L S + +RS+G +P+ EY+++G F M+ + R TV+ ++
Sbjct: 802 WMDHIDNMDQLKSGIRLRSYGQHDPVVEYRVEGFDMFDEMIESIREDTVKMML 854
>gi|452857152|ref|YP_007498835.1| translocase binding subunit (ATPase) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452081412|emb|CCP23180.1| translocase binding subunit (ATPase) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 841
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT VVTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAQQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEIFSFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A K Y A L + YT ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKTFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVSIPTNQPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 89/349 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRK------------------- 594
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
Q+ QY D+++ + + R+ +D + L D
Sbjct: 595 --------------QLLQY-----DDVLRQQREVIYKQRFEVID----------SENLRD 625
Query: 708 LFAGISGDTLLKSI------EELPELNSID-----INNFYFPDLPKPPNLFRGIRRKSSS 756
+ G+ +L ++I EELPE ++D +N Y +
Sbjct: 626 IVEGMIKSSLERAIAAYTPKEELPEEWNLDGLVELVNTTYLDEGA--------------- 670
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
L K+ + + + + + D ++ Y +E + M+E E+ +++
Sbjct: 671 -----------LEKSDIFGKEPDEMHEMIMDRIMTKYNE--KEENFGTEQMREFEKVIVL 717
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W DH+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 718 RAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|134268198|gb|ABO68393.1| Translocase binding subunit, ATPase [Geobacillus
thermodenitrificans NG80-2]
Length = 822
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 283/427 (66%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G IAEMKT VVTVN+YLA RDA+ M
Sbjct: 67 YKVQIMGGVVLHEGDIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLASRDAKEM 126
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGL+VGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 127 GQLYEFLGLTVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 184
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA+VDEVDS+LIDE R PL+ISG A K Y A L + + YT + K+ S
Sbjct: 185 -PLYFAVVDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKSKS 243
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++
Sbjct: 244 VQLTEEGMNKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDP 303
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 304 FTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 363
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ +++ G+PVLVG+ +
Sbjct: 364 EEFRNIYNMRVVVIPTNRPVIREDRPDLIYRTMEGKFRAVVEDIAQRHAKGQPVLVGTVA 423
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 424 IETSELLSEMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 481
Query: 400 GNPKMLA 406
K L
Sbjct: 482 EGVKELG 488
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 164/347 (47%), Gaps = 85/347 (24%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 481 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 540
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + R + Q E
Sbjct: 541 A--MMDRLGMDDSQPIQSKMVTRAVESAQKRVE--------------------------- 571
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
G N +Q+ QY D+++ + + R+ LD D
Sbjct: 572 ------GNNFDARKQLLQY-----DDVLREQREVIYRQRFEVLDA--------------D 606
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFP--DLPKPPNLFRGIRRKSSSLKRWLAICS 765
GI + +++S+ E + N Y P DLP+ NL +G+ L +L +
Sbjct: 607 NLRGII-EKMIRSVIE-------RVVNTYTPKEDLPEEWNL-KGV---VDYLNAYL-LPE 653
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-------YMKEVERAVLVKT 818
D+T+ +L K +++ + V ++RYD+ M+E ER V+++
Sbjct: 654 GDVTEG-------DLRGKEPEEMIELIWAKV--KARYDEKETQIPPEQMREFERVVVLRA 704
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+D W +H+ M +L +++R++G +PL EY+++G F +M++A
Sbjct: 705 VDMKWMNHIDAMEQLRQGIHLRAYGQVDPLREYQMEGYAMFENMIAA 751
>gi|449095978|ref|YP_007428469.1| hypothetical protein C663_3415 [Bacillus subtilis XF-1]
gi|449029893|gb|AGE65132.1| hypothetical protein C663_3415 [Bacillus subtilis XF-1]
Length = 841
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/427 (47%), Positives = 278/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LHDG+IAEMKT VVTVN+ L RDAE M
Sbjct: 82 FKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNESLESRDAEQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K +
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKA 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R +E +K V
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSR-------------------------AVESSQKRV--- 585
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLD-KLLKEFIAIAGKILD 706
G N +Q+ QY D+++ + + R+ +D + L+E + I
Sbjct: 586 -----EGNNFDSRKQLLQY-----DDVLRQQREVIYKQRFEVIDSENLREIVE--NMIKS 633
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
L I+ T EELPE +D DL L G KS +
Sbjct: 634 SLERAIAAYT---PREELPEEWKLD----GLVDLINTTYLDEGALEKSDIFGK------- 679
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDH 826
+ + + + D +I Y +E ++ M+E E+ ++++ +D W DH
Sbjct: 680 ----------EPDEMLELIMDRIITKYNE--KEEQFGKEQMREFEKVIVLRAVDSKWMDH 727
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 728 IDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|239618276|ref|YP_002941598.1| preprotein translocase subunit SecA [Kosmotoga olearia TBF 19.5.1]
gi|239507107|gb|ACR80594.1| preprotein translocase, SecA subunit [Kosmotoga olearia TBF 19.5.1]
Length = 820
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 276/430 (64%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++G LH+G IAEMKT + TVNDYLA+RDA
Sbjct: 78 MRHFDVQVMGAIALHEGKIAEMKTGEGKTLVATMPLYLNALTGKNVQLATVNDYLARRDA 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM V+ +LGL+VG IQ M +R+ Y+ D+TY +E GFDYLRDNL + EQ V
Sbjct: 138 AWMGPVYEYLGLTVGYIQSSMDTSDRKKAYQSDVTYGTANEFGFDYLRDNLVYSLEQKVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++ IVDE DS+LIDE R PL+ISG A Y +A A V+ + V K
Sbjct: 198 R---DHYYVIVDEADSILIDEARTPLIISGPAEASSELYRKSAFYARRFVENEDFIVNEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARF-VMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT++GI AE ++L+D N+ F ++NALKA+ +++DV YIV NG+ +I
Sbjct: 255 EKTVSLTDKGIEKAERLFGIDNLYDPNNYTYLFHLLNALKARTLFKKDVDYIVSNGEVII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+SEG+HQA+EAKE +KI+ +S+ A IT+Q+ FK+Y KL+GMTGTA
Sbjct: 315 VDEFTGRLLPGRRYSEGLHQAIEAKENVKIKEESITYATITFQNYFKMYEKLAGMTGTAA 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF+ ++ V+ +PTN P +R D F T K+ +E+E ++ G+PVLVG
Sbjct: 375 TEEAEFVSIYGCEVVVIPTNKPVLRKDKDDLVFRTVEEKYAAIVEEIEKRYKKGQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LL+++GIPH VLNA K+ REAE VA+AG K +TI+TNMAGRGTDI
Sbjct: 435 TTSIEKSEYLSSLLRKKGIPHEVLNA--KHHEREAEIVAKAGEKGTVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 493 KLGEGVKELG 502
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQL GR+GRQGDPG +RF +SL+D++ + F +
Sbjct: 495 GEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFFLSLEDDLIRLFGGEKLK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ +I E PIE + R + Q E +F IRK L E D V++ QR +Y
Sbjct: 555 GIMDTLKIEKGE--PIEHPLLSRIINSAQKKIEGIHFSIRKRLYELDSVVDKQRSAIYAH 612
Query: 648 RQSILTGANESCSQQIFQYMQAVV 671
R +L G E + I + ++ V
Sbjct: 613 RDWLLRG--EDIDKHIHEIIEDTV 634
>gi|407478096|ref|YP_006791973.1| protein translocase subunit SecA 1 [Exiguobacterium antarcticum B7]
gi|407062175|gb|AFS71365.1| Protein translocase subunit SecA 1 [Exiguobacterium antarcticum B7]
Length = 839
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 276/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+ VQ+IGG VLH+G IAEMKT V+TVN+YLA+RD
Sbjct: 79 MRHYRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALAGNGVHVITVNEYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ ME ++ LGLSVGL M +E+++ Y CDITY N+E GFDYLRDN+ E V
Sbjct: 139 DIMEPLYAALGLSVGLNLSSMSRQEKQAAYSCDITYGTNNEFGFDYLRDNMVLYKEDRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FA+VDEVDS+L+DE R PL+ISG A K A Y A A+++ YTV++K
Sbjct: 199 R---PLYFAVVDEVDSILVDEARTPLIISGSAEKSTALYSQADMFAKMMKADEDYTVDIK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE+GI AE ++L+ E+ + AL+A RDV Y++R + +I
Sbjct: 256 TKSVLLTEQGIDRAEKYFGIDNLFALEHIALNHHLSLALRANSVMHRDVDYMIREDEVMI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I++ TGRV E RR+SEG+HQA+EAKEG++IQ +S+ +A ITYQ+ F++Y KL+GMTGTAK
Sbjct: 316 IDQFTGRVMEGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNFFRMYTKLAGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V+ VPTN P +R D P F T GK+ E+E R G+PVLVG
Sbjct: 376 TEEEEFRNIYNMHVVPVPTNKPIVRDDQPDLIFKTMNGKFAAVADEIERAHREGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE LS +LK++GI H VLNA K AREAE V AG+ A+TI+TNMAGRGTDI
Sbjct: 436 TVAVETSELLSSILKKRGIRHEVLNA--KNHAREAEIVENAGQPNAVTIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 16/191 (8%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G+ V GGL+++GT HESRRIDNQLRGRAGRQGDPG+++F +SL+DE+ ++F D+
Sbjct: 496 GTGVIEKGGLYILGTERHESRRIDNQLRGRAGRQGDPGASQFYLSLEDELMRRFGSDSLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PIE + R + Q E F RK ++ +D V+ QRK +Y
Sbjct: 556 S--MMDRLGMDDSQPIESRMVSRAVESAQKRVEGNNFDARKQVLGYDNVMADQRKVMYAD 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVD---PLKH-PRYWSLDKL---LKEFIAI 700
R +IL +Q + ++ ++++ I V P++ P WS+ L + +AI
Sbjct: 614 RAAILD------AQSVSDIVRPMIEQTIESGVHQYTPIEFVPEEWSIGALADWANQTLAI 667
Query: 701 AGKILD-DLFA 710
K+ + DLF
Sbjct: 668 EEKVSEQDLFG 678
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
E E+ ++++ +D W +H+ M++L +++R++G +PL EY+ +G F +M +A
Sbjct: 710 EFEKVIVLRAVDQHWMNHIDQMDQLREGIHLRAYGQNDPLREYQSEGSMMFDTMNAA 766
>gi|296532548|ref|ZP_06895260.1| preprotein translocase subunit SecA [Roseomonas cervicalis ATCC
49957]
gi|296267125|gb|EFH13038.1| preprotein translocase subunit SecA [Roseomonas cervicalis ATCC
49957]
Length = 940
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 282/439 (64%), Gaps = 37/439 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA RD+
Sbjct: 111 MRHFDVQMIGGMVLHSGRIAEMKTGEGKTLVATLPVYLNGLTGKGVHVVTVNDYLASRDS 170
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M R++ FLGLS G+I G+ ERR Y CDITY N+E GFDYLRDN+ +++V
Sbjct: 171 AQMGRLYNFLGLSCGVIVHGLTDVERRDAYACDITYGTNNEFGFDYLRDNMKYRLDEMVQ 230
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-YTVEL 156
R F++AIVDEVDS+L+DE R PL+ISG A Y V +LVQ Y +
Sbjct: 231 R---DFNYAIVDEVDSILVDEARTPLIISGPAEDSSELYRAVDAVVRVLVQDKETYEKDE 287
Query: 157 KNNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K + LTE G A E L DL+D +N V +L+A + RDV YIV
Sbjct: 288 KLRTAALTEPGTATVEGMLREAGLLTEGDLYDFQNVTLVHHVNQSLRAHVLFARDVDYIV 347
Query: 210 -RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 268
R GK +II+E TGR+ E RR+SEG+HQA+EAKEG+++Q ++ +A IT+Q+ F+LYPKL
Sbjct: 348 NREGKLVIIDEFTGRMMEGRRYSEGLHQALEAKEGVEVQPENQTLASITFQNYFRLYPKL 407
Query: 269 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 328
+GMTGTA TE EF +++++ V+E+PTN+P R+D + + +AR K+E V+
Sbjct: 408 AGMTGTASTEADEFAEIYKLEVVEIPTNVPVSRIDSDDEVYRSAREKYEAVAALVQEAQA 467
Query: 329 LGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 388
+PVLVG+TS+E SE +S+LLK +G+PH VLNAR Y +EA +AQAGR A+TI+TN
Sbjct: 468 RQQPVLVGTTSIEKSELISELLKAKGVPHQVLNAR--YHEQEAGIIAQAGRPGAVTIATN 525
Query: 389 MAGRGTDIILGGNPKMLAK 407
MAGRGTDI LGGN +MLA+
Sbjct: 526 MAGRGTDIKLGGNAEMLAE 544
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
VK+ GGL VIGT HESRRIDNQLRGR+GRQGDPG++RF +SL+D++ + F D
Sbjct: 574 VKQAGGLFVIGTERHESRRIDNQLRGRSGRQGDPGASRFFLSLEDDLMRIFGSDRMGG-- 631
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ E I I R L Q E F RK+L+++D+V+ QRK VY R++
Sbjct: 632 MLQKLGLKEGEAIVHPWINRALEKAQKKVEARNFDTRKNLLKYDDVMNDQRKEVYSQRKT 691
Query: 651 ILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL 690
+ A+ E+ + + + A+V I N +P W L
Sbjct: 692 FMQAADVAETVEEMRRETIAAMVARAIPENA----YPEQWDL 729
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M++VE++VL++ D W++HL+ ++ L + +R++ R+PL EYK + F +ML
Sbjct: 784 MRQVEKSVLLQVFDAAWKEHLLALDHLRQGIGLRAYAQRDPLNEYKSEAFNLFTAMLEEL 843
Query: 867 R 867
R
Sbjct: 844 R 844
>gi|302344286|ref|YP_003808815.1| Preprotein translocase subunit SecA [Desulfarculus baarsii DSM
2075]
gi|301640899|gb|ADK86221.1| preprotein translocase, SecA subunit [Desulfarculus baarsii DSM
2075]
Length = 839
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/428 (47%), Positives = 282/428 (65%), Gaps = 30/428 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+D Q+IGG VLH G IAEMKT VVTVNDYLA+RDAE
Sbjct: 82 RHYDAQMIGGMVLHQGKIAEMKTGEGKTLAATLPVYLNALAGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++ FLGLSVG I G+ +R+ Y DITY N+E GFDYLRDN+ E LV R
Sbjct: 142 WMGAIYNFLGLSVGCIVHGLDDAQRKDQYNRDITYGTNNEFGFDYLRDNMKFTVEDLVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+ FAIVDEVDS+LIDE R PL+ISG K Y ++ L + HY V+ K+
Sbjct: 202 ---DYFFAIVDEVDSILIDEARTPLIISGPGEKSSELYVQIDRLIPRLKREEHYAVDEKS 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LTE+G+A E L ++L+D + ALKA ++ DV YIV++G+ +I+
Sbjct: 259 RTAALTEDGVAKCEELLRVDNLYDPRYIDLLHHIQQALKAHTLFKLDVDYIVKDGEVIIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKE +K+ +++ +A IT+Q+ F++Y KLSGMTGTA T
Sbjct: 319 DEFTGRLMPGRRFSEGLHQALEAKENVKVASENQTLATITFQNYFRMYEKLSGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V+ +PT+ P +R D P Q + T R K++ +E++ + GRPVLVG+
Sbjct: 379 EAEEFRKIYNLDVVVIPTHRPMVRKDNPDQIYRTEREKFDAVVREIKDLHAKGRPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
+++ SE LS +LK+QG+PH+VLNA K+ A+EAE VA AG+K A+TISTNMAGRGTDI+
Sbjct: 439 INIDKSEQLSKMLKRQGVPHHVLNA--KHHAQEAEIVAAAGQKNAVTISTNMAGRGTDIV 496
Query: 398 LG-GNPKM 404
LG G P++
Sbjct: 497 LGEGVPEL 504
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 88/370 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF VSL+D++ + F +
Sbjct: 498 GEGVPELGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSLEDDLMRLFGSERIS 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++++ +E PIE + I + + Q E F IR+ L+++D+VL QR+ VY
Sbjct: 558 GI--MTKLGMEEGEPIEHNLISKAIENAQRKVEGRNFEIREQLLKYDDVLNKQREVVYAQ 615
Query: 648 RQSILTGAN------ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIA 701
R+ LTG E +Q Q +A DE I PL+ ++ A+A
Sbjct: 616 RRQALTGEGVHEAVAEMIEEQAHQLAEAHADEKI-----PLEQ----------RDAQALA 660
Query: 702 GKILDDLFAGISGDTLLKSIEELPELNSIDINNFYF-PDLPKPPNLFRGIRRKSSSLKRW 760
+ N F F P+LP+P +W
Sbjct: 661 EAVF---------------------------NVFGFKPELPEP--------------AQW 679
Query: 761 LAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQES--RYDDVYMKEVERAVLVKT 818
A + L + +IA V Q Y M +VE+ VL+ T
Sbjct: 680 DA--------------------QTLAEEIIARARAVYQRKFDEYGAPIMLQVEQWVLLDT 719
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY- 877
+D W+DHL+NM+ L + +R + ++PL EY+ +G F +M + + TV L++
Sbjct: 720 VDAHWKDHLLNMDHLKEGIGLRGYAQKDPLREYQREGFEMFSAMAQSVQMETVAKLMRVQ 779
Query: 878 WSSPMESQEL 887
S P ++ +L
Sbjct: 780 LSRPEDAVQL 789
>gi|260906849|ref|ZP_05915171.1| preprotein translocase subunit SecA [Brevibacterium linens BL2]
Length = 898
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 282/440 (64%), Gaps = 30/440 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA LH G+IAEMKT V+TVNDYLA +
Sbjct: 80 MRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALTGGSVHVITVNDYLATYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV RFLG+ G IQ M + RR Y DITY N+E GFDYLRDN+A ++++LV
Sbjct: 140 ELMGRVFRFLGMETGCIQANMSSDNRRKQYAADITYGTNNEFGFDYLRDNMAWSADELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R FAIVDEVDS+LIDE R PL+ISG A D R Y AKV + L Y V+
Sbjct: 200 RG---HAFAIVDEVDSILIDEARTPLIISGPAEGDGNRWYEEFAKVVKRLKTDRDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L +L+D EN P F+ NA++AKE +++D Y++ +G+ L
Sbjct: 257 KKRTVGVLEPGIERVEDYLGIGNLYDAENTPLISFLNNAIRAKELFKKDKDYVILDGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGRV + RR++EG+HQA+EAKE +K+QA++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 IVDEHTGRVLKGRRYNEGLHQAIEAKENVKVQAENQTLATITLQNFFRLYDKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN P R+D + K++ ++ G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVPIPTNKPMQRIDQSDLVYKNEVAKFDAVVDDIAERHETGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LK++GI H VLNA K A EA VA AGRK A+T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSKHLKKRGIRHEVLNA--KNHAGEASIVAMAGRKDAVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLAKKIIEDRLL 415
I+LGGN + +A +E R L
Sbjct: 495 IMLGGNAEFIAVAEMEKRGL 514
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VLK E +E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLKAAEKRVKSEAEEVVEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTD 589
Query: 576 EMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F S A + I N +D+P+E + R +L Q E+ RK+++++D
Sbjct: 590 DLMRLFG---SGAAERIMATANVPDDVPLESKMVSRAILSAQSQIEQRNAEQRKNVLKYD 646
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+VL QR +YD R+S+L GA+ Q+ ++ + V+D +
Sbjct: 647 DVLNRQRTVIYDERRSVLDGAD--LEDQVSKFREEVIDAYV 685
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISM 862
+E+ER V++ +D WR+HL M+ L + + +R+ ++PL EY+ +G F +M
Sbjct: 758 RELERRVVLSVIDKRWREHLYEMDYLKNGIGLRAMAQKDPLVEYQREGFDMFKTM 812
>gi|196249387|ref|ZP_03148085.1| preprotein translocase, SecA subunit [Geobacillus sp. G11MC16]
gi|196211144|gb|EDY05905.1| preprotein translocase, SecA subunit [Geobacillus sp. G11MC16]
Length = 837
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 283/427 (66%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G IAEMKT VVTVN+YLA RDA+ M
Sbjct: 82 YKVQIMGGVVLHEGDIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLASRDAKEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGL+VGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GQLYEFLGLTVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA+VDEVDS+LIDE R PL+ISG A K Y A L + + YT + K+ S
Sbjct: 200 -PLYFAVVDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKSKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++
Sbjct: 259 VQLTEEGMNKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ +++ G+PVLVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPVIREDRPDLIYRTMEGKFRAVVEDIAQRHAKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELLSEMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 158/340 (46%), Gaps = 71/340 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + R + Q E
Sbjct: 556 A--MMDRLGMDDSQPIQSKMVTRAVESAQKRVE--------------------------- 586
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
G N +Q+ QY D+++ + + R+ LD D
Sbjct: 587 ------GNNFDARKQLLQY-----DDVLREQREVIYRQRFEVLDA--------------D 621
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFP--DLPKPPNLFRGIRRKSSSLKRWLAICS 765
GI + +++S+ E + N Y P DLP+ NL +G+ L +L
Sbjct: 622 NLRGII-EKMIRSVIE-------RVVNTYTPKEDLPEEWNL-KGL---VDYLNAYLLPEG 669
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
D + R + ++ + A Y +E++ M+E ER V+++ +D W +
Sbjct: 670 DVTEGDLRGKEPEEMIELIWAKVK-ARYDE--KETQIPSEQMREFERVVVLRAVDMKWMN 726
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
H+ M +L +++R++G +PL EY+++G F +M++A
Sbjct: 727 HIDAMEQLRQGIHLRAYGQVDPLREYQMEGYAMFENMIAA 766
>gi|338707336|ref|YP_004661537.1| preprotein translocasesubunit SecA [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294140|gb|AEI37247.1| preprotein translocase, SecA subunit [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 924
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 277/430 (64%), Gaps = 36/430 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQIIGG VLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQIIGGIVLHRGEIAEMRTGEGKTLVATLVCYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +V++FLGL+VG+I + EERR Y DITY N+ELGFDYLRDN+ + Q+V R
Sbjct: 142 QMGQVYKFLGLTVGVIMPNISDEERRQAYAADITYATNNELGFDYLRDNMKYSRSQMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AI+DEVDS+LIDE R PL+ISG Y ++ + L Y ++ K
Sbjct: 202 ---PFNYAIIDEVDSILIDEARTPLIISGPTDDKSDLYIAVDQIVKKLT-AEDYEIDEKQ 257
Query: 159 NSVELTEEGIALAEM------ALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTEEG AE LE +L+D EN + +L+A +RRDV Y++RN
Sbjct: 258 KNVILTEEGTEKAEQLLKAADMLEEGNLYDFENTQIVHHLNQSLRANLMFRRDVDYLIRN 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
GK +II+E TGR+ E RRWSEG+HQA+EAKEG++I+ ++ +A IT+Q+ F+LYP+++GM
Sbjct: 318 GKIIIIDEFTGRMMEGRRWSEGLHQAIEAKEGVQIEPENQTLASITFQNYFRLYPRIAGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF ++++M V+ +PTNL R D Q + K+ + ++ G+
Sbjct: 378 TGTAATEAAEFHQIYKMNVVTIPTNLSIRRADENDQFYKNMEDKFRAIAKAIKKHAASGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+ S+E SE LS+ L+ +G+PH VLNAR Y EA VAQAGR A+TI+TNMAG
Sbjct: 438 PILVGTVSIEKSELLSEYLQHEGVPHKVLNAR--YHEMEAHIVAQAGRFGAVTIATNMAG 495
Query: 392 RGTDIILGGN 401
RGTDI LGGN
Sbjct: 496 RGTDIQLGGN 505
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 12/134 (8%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E +V GGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F
Sbjct: 534 VAEEKQKVINAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLLRIFGS 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA-----EKYYFGIRKSLVEFDEVLE 638
T +A + + + G+AIV ++ I E + IRK +VE+D+V+
Sbjct: 594 QTMFAKMMNKSLAD-------GEAIVSPIMSKAIETAQRKVEARNYDIRKQVVEYDDVMN 646
Query: 639 VQRKHVYDLRQSIL 652
QRK +Y+ R +I+
Sbjct: 647 EQRKVIYEQRATIM 660
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
++++ L++ +D W++HL ++ L +++R++ + P+ EYK + F ML A R
Sbjct: 753 DLQKNTLLQAIDHHWKEHLSVLDSLRQIIHLRAYAQQTPINEYKHEAFALFERMLLAIRE 812
Query: 869 LTVESL--VQYWSSPMESQEL 887
+L ++++ +E EL
Sbjct: 813 DVTRNLNRIEFFQPSLELPEL 833
>gi|162330294|ref|YP_001127138.2| preprotein translocase subunit SecA [Geobacillus
thermodenitrificans NG80-2]
gi|167016621|sp|A4IST9.2|SECA1_GEOTN RecName: Full=Protein translocase subunit SecA 1
Length = 837
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/427 (48%), Positives = 283/427 (66%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G IAEMKT VVTVN+YLA RDA+ M
Sbjct: 82 YKVQIMGGVVLHEGDIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLASRDAKEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGL+VGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GQLYEFLGLTVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA+VDEVDS+LIDE R PL+ISG A K Y A L + + YT + K+ S
Sbjct: 200 -PLYFAVVDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKSKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++
Sbjct: 259 VQLTEEGMNKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ +++ G+PVLVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPVIREDRPDLIYRTMEGKFRAVVEDIAQRHAKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELLSEMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 164/347 (47%), Gaps = 85/347 (24%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + R + Q E
Sbjct: 556 A--MMDRLGMDDSQPIQSKMVTRAVESAQKRVE--------------------------- 586
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
G N +Q+ QY D+++ + + R+ LD D
Sbjct: 587 ------GNNFDARKQLLQY-----DDVLREQREVIYRQRFEVLDA--------------D 621
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFP--DLPKPPNLFRGIRRKSSSLKRWLAICS 765
GI + +++S+ E + N Y P DLP+ NL +G+ L +L +
Sbjct: 622 NLRGII-EKMIRSVIE-------RVVNTYTPKEDLPEEWNL-KGV---VDYLNAYL-LPE 668
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV-------YMKEVERAVLVKT 818
D+T+ +L K +++ + V ++RYD+ M+E ER V+++
Sbjct: 669 GDVTEG-------DLRGKEPEEMIELIWAKV--KARYDEKETQIPPEQMREFERVVVLRA 719
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+D W +H+ M +L +++R++G +PL EY+++G F +M++A
Sbjct: 720 VDMKWMNHIDAMEQLRQGIHLRAYGQVDPLREYQMEGYAMFENMIAA 766
>gi|451981710|ref|ZP_21930058.1| Preprotein translocase subunit SecA [Nitrospina gracilis 3/211]
gi|451761058|emb|CCQ91323.1| Preprotein translocase subunit SecA [Nitrospina gracilis 3/211]
Length = 855
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/435 (46%), Positives = 283/435 (65%), Gaps = 30/435 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGVALHEGKIAEMKTGEGKTLVATLPVYLNALAGRGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++R+LGL VG+I M E+R+ Y D+TY N+E GFDYLRDN+ +E V
Sbjct: 141 EWMGTIYRWLGLEVGVIYHDMSEEDRKKAYASDVTYGTNNEFGFDYLRDNMKFAAEDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG + +Y V + L + HYTV+ K
Sbjct: 201 R---ELNFAIVDEVDSILIDEARTPLIISGPGEESTDKYYVINNILPNLQKETHYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV L +EGI+L E L ++L+D + V LKA ++ +V Y+V++GK +I
Sbjct: 258 ARSVALNDEGISLVEKQLNIDNLYDPSHIDILHHVNQGLKAHALFKNEVDYVVKDGKVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I+E TGR+ RR+S+G+HQA+EAKEG++I+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 IDEFTGRMMPGRRYSDGLHQALEAKEGVEIENENQTLATITFQNYFRMYDKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF + + V+ +PTN P +R D + T + K++ +E++ + +GRP LVG
Sbjct: 378 TEAEEFNSTYGIEVLVIPTNQPMVRDDHADLIYRTEKEKFDAVIEEIQECYEVGRPALVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LK+ G+PHNVLNA K+ +EAE +AQAG++ A+TI+TNMAGRGTDI
Sbjct: 438 TISIEKSELLSKHLKRCGVPHNVLNA--KHHEQEAEIIAQAGQQKAVTIATNMAGRGTDI 495
Query: 397 ILG-GNPKMLAKKII 410
+LG G P + II
Sbjct: 496 VLGEGVPDLGGLHII 510
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 56/332 (16%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 498 GEGVPDLGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLLRIFGSDRIS 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ + PIE + R + Q E + F IRK L+++D+V+ QR+ +Y L
Sbjct: 558 G--LMGKLGMENGQPIEHAMVSRAVENAQRKVEAHNFEIRKHLLQYDDVMNKQREVIYTL 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ILT AN+ + +F V+ E I +P W I D
Sbjct: 616 RREILTSANQK--ELLFDMADEVLGERIDEMCPEGVYPEEWD--------IEQVHNYTDR 665
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+F G+ GI + S + L +C
Sbjct: 666 VF-GV------------------------------------GITKASD---QELEVCGK- 684
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
T+ T L++ + ++ I Y +E++ YM+ ER ++++ LD WR+HL
Sbjct: 685 -TRLELEHCTAAQLQETILNMAIERY--EAKEAQVGGEYMRYPERMIMLQVLDNLWREHL 741
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ M+ L A+ R + +NPL EYK +G + F
Sbjct: 742 LGMDHLKEAIAFRGYAQKNPLNEYKKEGFQLF 773
>gi|154687645|ref|YP_001422806.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
FZB42]
gi|384267064|ref|YP_005422771.1| protein translocase subunit secA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387900158|ref|YP_006330454.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens Y2]
gi|394991071|ref|ZP_10383879.1| preprotein translocase subunit SecA [Bacillus sp. 916]
gi|166918852|sp|A7Z999.1|SECA_BACA2 RecName: Full=Protein translocase subunit SecA
gi|154353496|gb|ABS75575.1| SecA [Bacillus amyloliquefaciens FZB42]
gi|380500417|emb|CCG51455.1| Protein translocase subunit secA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387174268|gb|AFJ63729.1| preprotein translocase SecA subunit [Bacillus amyloliquefaciens Y2]
gi|393808054|gb|EJD69365.1| preprotein translocase subunit SecA [Bacillus sp. 916]
Length = 841
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT VVTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAQQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEIFAFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A K Y A L + YT ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKTFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVSIPTNQPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 89/349 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRK------------------- 594
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
Q+ QY D+++ + + R+ +D + L D
Sbjct: 595 --------------QLLQY-----DDVLRQQREVIYKQRFEVID----------SENLRD 625
Query: 708 LFAGISGDTLLKSI------EELPELNSID-----INNFYFPDLPKPPNLFRGIRRKSSS 756
+ G+ +L ++I EELPE ++D +N+ Y +
Sbjct: 626 IVEGMIKSSLERAIAAYTPKEELPEEWNLDGLVELVNSTYLDEGA--------------- 670
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
L K+ + + + + + D ++ Y +E + M+E E+ +++
Sbjct: 671 -----------LEKSDIFGKEPDEMHEMIMDRIMTKYNE--KEENFGTEQMREFEKVIVL 717
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W DH+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 718 RAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|182419840|ref|ZP_02951080.1| preprotein translocase, SecA subunit [Clostridium butyricum 5521]
gi|237666587|ref|ZP_04526572.1| preprotein translocase, SecA subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182376388|gb|EDT73970.1| preprotein translocase, SecA subunit [Clostridium butyricum 5521]
gi|237657786|gb|EEP55341.1| preprotein translocase, SecA subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 902
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+D Q++GG VLH G I+EMKT +VTVNDYLA+RDA
Sbjct: 79 MKHYDEQLMGGMVLHQGRISEMKTGEGKTLVATLPAYLNGLSEDGVHIVTVNDYLAKRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M ++ FLGL+ G+I + ++RR Y CDITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EQMGELYGFLGLTTGVIIHDLNNDQRREAYACDITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+LIDE R PL+ISG+ K Y VA A+ LV +T + K
Sbjct: 199 R---PLNFAIVDEVDSILIDEARTPLIISGQGEKSTEFYKVADYFAKKLVAEKDFTKDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
N++ LT+EGI AE + + D +N +V ALKA R+D Y+V++G+ +I
Sbjct: 256 ANAILLTDEGIKKAEATFKVENYADADNLELQHYVTQALKANFAMRKDKDYMVKDGEVII 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+KI +S +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKIARESKTLATITFQNYFRMYKKLSGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + VI +PT+ P R+D P F+T +GK+E EV + G+PVLVG
Sbjct: 376 TEEGEFREIYGLDVIVIPTHRPIARIDNPDLVFSTEKGKFEAVASEVAKAYEKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S LLK++GIPH VLNA K+ +EAE ++ AG K +TI+TNMAGRGTDI
Sbjct: 436 TVSIEKSELVSHLLKKKGIPHQVLNA--KFHEQEAEIISHAGEKGMVTIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 67/347 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGR+GRQGD G + F +SL+D++ + F +
Sbjct: 496 GEGVLELGGLKIIGTERHESRRIDNQLRGRSGRQGDKGESTFFISLEDDLMRIFGSEKIQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + ++ ED IE + + + Q E F IRK+L+ +D V+ +QR+ +Y
Sbjct: 556 GV--VEKLGLQEDEAIESKMVSKAIENAQKKVEGNNFDIRKTLLGYDNVMNIQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G E ++I ++ ++ + + ++ D +EF+ +
Sbjct: 614 RSEVLEG--EDVKEEILSMVREIISKAVNTHI-------TGESDNYREEFLHLM------ 658
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
Y D+ PPN S +L + +++
Sbjct: 659 ---------------------------VYLQDMCIPPN--------SVNLPSLENMSNEE 683
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
++ + Y+ + Y N +E + ++E+ER VL+K +D W +H+
Sbjct: 684 IS-DSLYKTAIDF------------YEN--KEEEFTSERLREIERVVLLKAVDTKWMNHI 728
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
NM+ L + +++F +P++ Y ++G F +M++ + TV L
Sbjct: 729 DNMDHLKQGIGLQAFKQIDPVQAYSMEGSEMFDNMINEIKEETVRLL 775
>gi|375363965|ref|YP_005132004.1| Protein translocase subunit SecA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421730072|ref|ZP_16169201.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|451345318|ref|YP_007443949.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
IT-45]
gi|371569959|emb|CCF06809.1| Protein translocase subunit SecA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407076038|gb|EKE49022.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|449849076|gb|AGF26068.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
IT-45]
Length = 841
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT VVTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAQQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEIFAFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A K Y A L + YT ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKTFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVSIPTNQPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 89/349 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRK------------------- 594
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
Q+ QY D+++ + + R+ +D + L D
Sbjct: 595 --------------QLLQY-----DDVLRQQREVIYKQRFEVID----------SENLRD 625
Query: 708 LFAGISGDTLLKSI------EELPELNSID-----INNFYFPDLPKPPNLFRGIRRKSSS 756
+ G+ +L ++I EELPE ++D +N+ Y +
Sbjct: 626 IVEGMIKSSLERAIAAYTPKEELPEEWNLDGLVELVNSTYLDEGA--------------- 670
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
L K+ + + + + + D ++ Y +E + M+E E+ +++
Sbjct: 671 -----------LEKSDIFGKEPDEMHEMIMDRIMTKYNE--KEENFGTEQMREFEKVIVL 717
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W DH+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 718 RAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|453051751|gb|EME99249.1| preprotein translocase subunit SecA [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 941
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 288/450 (64%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGDGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLSVGCILANMTPAQRREQYNCDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLKRGEPANPQKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVGIHEAGVTKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVMDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P R D + T K++ +++
Sbjct: 377 NKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMQRKDQSDLIYRTEVAKFDAVVEDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GIPH VLNA K+ REA+ VAQAGRK A+T+
Sbjct: 437 KHAKGQPILVGTTSVEKSEYLSQQLAKRGIPHEVLNA--KHHEREAQIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 9/185 (4%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAEAAVKAEFEEVKALGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD-----EIIFGNVDPLKHPRYWS 689
EVL QR+ +Y R+ +L G E +QI +M +D E + G + R WS
Sbjct: 657 EVLNRQREVIYGERRRVLEG--EDLREQIMHFMDDTIDDYIRQETVEGFAEEWDLERLWS 714
Query: 690 LDKLL 694
K L
Sbjct: 715 AFKQL 719
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|429506823|ref|YP_007188007.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|429488413|gb|AFZ92337.1| preprotein translocase subunit SecA [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 841
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT VVTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAQQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEIFAFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A K Y A L + YT ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKTFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVSIPTNQPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 159/349 (45%), Gaps = 89/349 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+V L
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDV----------L 603
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
RQ E+I+ + F I + L D
Sbjct: 604 RQQ---------------------REVIYK-----------------QRFEVIDSENLRD 625
Query: 708 LFAGISGDTLLKSI------EELPELNSID-----INNFYFPDLPKPPNLFRGIRRKSSS 756
+ G+ +L ++I EELPE ++D +N+ Y +
Sbjct: 626 IVEGMIKSSLERAIAAYTPKEELPEEWNLDGLVELVNSTYLDEGA--------------- 670
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
L K+ + + + + + D ++ Y + +E + M+E E+ +++
Sbjct: 671 -----------LEKSDIFGKEPDEMHEMIMDRIMTKYND--KEENFGTEQMREFEKVIVL 717
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W DH+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 718 RAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|427390519|ref|ZP_18884925.1| preprotein translocase, SecA subunit [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732834|gb|EKU95641.1| preprotein translocase, SecA subunit [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 962
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 286/439 (65%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GG LH G+IAEMKT VVTVNDYLA +E
Sbjct: 81 RPYDVQVMGGVALHLGNIAEMKTGEGKTLVATMPSYLNALEGKGVHVVTVNDYLASYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R++RFLGL+VG I G P +RR Y DITY N+E GFDYLRDN+A E++V R
Sbjct: 141 LMGRIYRFLGLTVGCIVTGQNPNQRREQYNADITYGTNNEFGFDYLRDNMAWKPEEMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
++AIVDEVDS+LIDE R PL+ISG A D R Y A++ + L + Y V+ K
Sbjct: 201 G---HNYAIVDEVDSILIDEARTPLIISGPAEGDANRWYAEFARIVQRLRKDTDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E +L ++L++ N P ++ NA+KAKE + RD Y+V NG+ LI
Sbjct: 258 KRTVGVLEPGIDKVEDSLGIDNLYESLNTPLIGYLNNAIKAKELFERDRDYVVLNGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+
Sbjct: 318 VDEHTGRVLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYTKLAGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF +++ V+ +PTN P IR D + T GK ++ + G+PVLVG
Sbjct: 378 TEAEEFANTYELGVVPIPTNKPMIREDRTDLIYPTRAGKLRAVVNDIAERYEKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ SVE SE LSDLL ++ IPH+VLNA K REA+ VA+AGRK A+T++TNMAGRGTDI
Sbjct: 438 TASVEASEELSDLLDKENIPHSVLNA--KQHEREAKVVAEAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGNP+ A++ + R L
Sbjct: 496 MLGGNPEHRAQEALAARGL 514
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 167/366 (45%), Gaps = 71/366 (19%)
Query: 514 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
L + KD E EV LGGL+V+G+ HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 531 LQLQKDA---VKAEHDEVVELGGLYVLGSERHESRRIDNQLRGRSGRQGDPGESRFYLSL 587
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+D++ + F+ + +D+D PIE +I + + Q S E +RK+++++
Sbjct: 588 EDDLMRLFA---GGVAGRMLEAASDDDQPIENKSIAKTVRRAQGSIESRNAEMRKNVLKY 644
Query: 634 DEVLEVQRKHVYDLRQSILTGAN-ESCSQQIFQY-MQAVVDEIIFGNVDPLKHPRYWSLD 691
D+V+ QR VY R+ IL G + E Y +Q VVD I G + W L+
Sbjct: 645 DDVMNDQRTEVYSTRRRILEGEDIEDMVSGFLDYGVQDVVDSHIVGVPED-----EWDLE 699
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
L D+ +Y P P L
Sbjct: 700 SLWN-----------------------------------DLRGYYTPGF-SPDELV---- 719
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
DD G T LLR+ L D + A Y +E++ M+E+E
Sbjct: 720 --------------DDAAHTGGLDRET-LLRE-LTDDIHAHYEE--REAQVGADKMREIE 761
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R +++ LD WR+HL MN L + +R+ R+PL EYK +G + F +M + R +V
Sbjct: 762 RQIVLSVLDRKWREHLYEMNYLKEGIGLRAMAQRDPLVEYKDEGYQMFQAMDANIRSESV 821
Query: 872 ESLVQY 877
L +
Sbjct: 822 RYLFHF 827
>gi|385266425|ref|ZP_10044512.1| preprotein translocase subunit SecA [Bacillus sp. 5B6]
gi|385150921|gb|EIF14858.1| preprotein translocase subunit SecA [Bacillus sp. 5B6]
Length = 841
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT VVTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAQQM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+ FLGL+VGL M +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEIFAFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+L+DE R PL+ISG+A K Y A L + YT ++K
Sbjct: 200 -PLHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE ++L+D +N + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKTFGIDNLFDVKNVALNHHINQALKAHAAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + + GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVSIPTNQPVIRDDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 89/349 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+V L
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDV----------L 603
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
RQ E+I+ + F I + L D
Sbjct: 604 RQQ---------------------REVIYK-----------------QRFEVIGSENLRD 625
Query: 708 LFAGISGDTLLKSI------EELPELNSID-----INNFYFPDLPKPPNLFRGIRRKSSS 756
+ G+ +L ++I EELPE ++D +N+ Y +
Sbjct: 626 IVEGMIKSSLERAIAAYTPKEELPEEWNLDGLVELVNSTYLDEGA--------------- 670
Query: 757 LKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
L K+ + + + + + D ++ Y +E + M+E E+ +++
Sbjct: 671 -----------LEKSDIFGKEPDEMHEMIMDRIMTKYNE--KEENFGTEQMREFEKVIVL 717
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+ +D W DH+ M++L +++R++ NPL EY+++G F M+ +
Sbjct: 718 RAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIES 766
>gi|317050656|ref|YP_004111772.1| preprotein translocase, subunit SecA [Desulfurispirillum indicum
S5]
gi|316945740|gb|ADU65216.1| preprotein translocase, SecA subunit [Desulfurispirillum indicum
S5]
Length = 839
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/424 (49%), Positives = 277/424 (65%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH G+IAEMKT V+TVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGAVLHAGNIAEMKTGEGKTLVATLPVYLNALSGKGVHVITVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLGL VG+I G+ EER++ Y DITY N+ELGFDYLRDN+ E V
Sbjct: 141 EWMGKIYRFLGLEVGVIVHGLTDEERKAAYGADITYGTNNELGFDYLRDNMKFRIEDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG A Y A KV L +G H+ ++ K
Sbjct: 201 R---EHNFAIVDEVDSILIDEARTPLIISGPAEVSTDDYYRADKVVRQLQEGEHFNIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV-RNGKAL 215
+ + LTE G+ AE L +L+D N V +LKA Y+RD+ Y+V +GK +
Sbjct: 258 SRNTVLTEPGVKQAEALLGIENLYDVSNMKLLHHVNQSLKAHHNYQRDIHYMVDEDGKVV 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGRV E RR+S+G+HQA+EAKE + I+ ++ +A ITYQ+ F+LY KL+GMTGTA
Sbjct: 318 IVDEFTGRVLEGRRYSDGLHQAIEAKEQVPIERENQTLATITYQNYFRLYSKLAGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE EF K++ + V +PTN+P R+D + + T K+ +E+ + G+P LV
Sbjct: 378 DTEAAEFKKIYDLEVAVIPTNVPMQRIDNTDKVYRTKDEKFAAVIEEIREAHQKGQPCLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ SVE+SEYLS+LLK+ I HNVLNA K A EA +A AG++ A+TI+TNMAGRGTD
Sbjct: 438 GTISVESSEYLSNLLKKAKIKHNVLNA--KNHAHEATIIADAGKQGAVTIATNMAGRGTD 495
Query: 396 IILG 399
I LG
Sbjct: 496 IKLG 499
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS++F +SL+D++ + F D
Sbjct: 499 GEGVLELGGLHIVGTERHESRRIDNQLRGRSGRQGDPGSSQFFLSLEDDLMRIFGGD--R 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ R E PIE + R + Q E Y+F +RK L+E+D+V+ QR+ +Y
Sbjct: 557 IKNLMDRFGMQEGEPIEHTLVNRAIENAQKKVENYHFEVRKHLLEYDDVMNQQRQIIYTY 616
Query: 648 RQSILTG 654
R+ IL G
Sbjct: 617 RREILGG 623
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
++R L+ +D W+D+L++M+RL + +RS+G +NPL EYK + F +M+S +
Sbjct: 713 LKRYFLLNIIDTAWKDNLLSMDRLKEGIGLRSYGQKNPLTEYKREAFELFENMMSRIKEE 772
Query: 870 TV 871
TV
Sbjct: 773 TV 774
>gi|304391087|ref|ZP_07373039.1| preprotein translocase subunit SecA [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304325970|gb|EFL93216.1| preprotein translocase subunit SecA [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 948
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 284/443 (64%), Gaps = 33/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHF QI+GGA LH G+IAEMKT VVTVNDYLA
Sbjct: 79 LRHFREQIMGGAALHWGNIAEMKTGEGKTLVATLPCYLRALSGKGVHVVTVNDYLASYQG 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+R+LGLS G+I M PEERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 ELMGRVYRYLGLSTGIIMAQMDPEERRKQYNCDITYGTNNEFGFDYLRDNMAQRVEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R ++ IVDEVDS+LIDE R PL+ISG A DV Y AK+ + L G Y V+
Sbjct: 199 R---EHNYIIVDEVDSILIDEARTPLIISGPAQGDVNHWYTDFAKIVQDLHPGEDYEVDQ 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKA 214
K +V + E GI E L ++L++ N P F+ NA+KAKE ++ D YIV G+
Sbjct: 256 KKRTVGVLEPGIDKVEDYLGIDNLYEVANTPLIGFLNNAIKAKELFKLDKDYIVTPEGEV 315
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS--GMT 272
LI++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ +LYPK S GMT
Sbjct: 316 LIVDEHTGRVLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYVRLYPKGSRAGMT 375
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA+TE EF +++M V+ +PT+ P IR D + TA K+ +++E + G+P
Sbjct: 376 GTAETEAAEFNDVYKMGVVPIPTHKPMIREDKDDLVYKTAEAKFNAVVEDIEENYHRGQP 435
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TSVE SEYLS LL Q+ IPH VLNA K REA VA AGRK +T++TNMAGR
Sbjct: 436 VLVGTTSVEKSEYLSHLLNQRKIPHQVLNA--KQHEREAAVVAMAGRKGQVTVATNMAGR 493
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGN + LA + ++DR L
Sbjct: 494 GTDIMLGGNAEFLAVQTLKDRGL 516
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 74/372 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L++ + + E EV LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +S++D
Sbjct: 532 ALQEAKAKVAQEHDEVVELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGRSRFYLSMED 591
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ +F+ + W +++ R ED+P+E + + Q E IRK+++++D+
Sbjct: 592 ELM-RFA-NQGWLGNMM-RSGLPEDIPLEFKMVSGAIRSAQTQVEGRNAEIRKNVLKYDD 648
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V+ QR+ +Y R +L G + + A VD I G +
Sbjct: 649 VMTEQRETIYGERGRVLRGED----------LSATVDSFIEGTI---------------- 682
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
D + ++ +LP+++ D+ + NL+
Sbjct: 683 ------------------ADAVAQAT-DLPDVSDWDLKTLW----AGLKNLYP------- 712
Query: 756 SLKRWLAICSDDLTK--NGRYRATTNLLRKYLGDI------LIASYL--NVVQESRYDDV 805
+++ +DL G+ TT+ + + L D L A L N + +++ D
Sbjct: 713 -----VSLSVEDLENAVGGKSALTTDFITEQLVDDAKLQYELAAKSLAENPIAQAQLGDE 767
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
MKE+ER VL+ +D WR+HL M+ L + +R+ G RNPL EYK +G F +M
Sbjct: 768 PMKELERRVLLSVVDRLWREHLYEMDYLKEGIGLRAMGQRNPLVEYKTEGYLMFSAMTGR 827
Query: 866 TRRLTVESLVQY 877
+ TV+++ Y
Sbjct: 828 IKEETVQNVFGY 839
>gi|452973509|gb|EME73331.1| preprotein translocase subunit SecA [Bacillus sonorensis L12]
Length = 841
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGIALHEGNIAEMKTGEGKTLTSTMPVYLNALSGKGVHVVTVNEYLASRDAEEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ +FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GQIFQFLGLTVGLNLNSLSKDEKRDAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K S
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKVEQDYTYDIKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A +L+D + + ALKA +DV Y+V G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIENLFDVRHVALNHHIAQALKAHVAMHKDVDYVVEEGQVIIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK++ ++V + +G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPVIRDDRPDLIYRTMDGKFKAVAEDVAQRYMVGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEDAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKDLG 503
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 10/201 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKDLGGLAVIGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMKRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDARKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKLLKEFIAIAGKILD 706
R ++ N + I + M E + P + P W+LD L+++ I LD
Sbjct: 614 RFEVIDSDN---LRSIVENMIKSSLERTVASYTPKEELPEEWNLDGLVEQ---INSNFLD 667
Query: 707 DLFAGISGDTLLKSIEELPEL 727
+ A D K EE+ EL
Sbjct: 668 E-GALEKSDIFGKESEEITEL 687
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E R+ M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEERFGSEQMREFEKVIVLREVDTKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFT 758
Query: 858 FFISMLSA 865
F +M++A
Sbjct: 759 MFENMIAA 766
>gi|302334950|ref|YP_003800157.1| protein translocase subunit secA [Olsenella uli DSM 7084]
gi|301318790|gb|ADK67277.1| protein translocase subunit secA [Olsenella uli DSM 7084]
Length = 916
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/434 (46%), Positives = 280/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGG LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 80 MRHFDVQIIGGIALHRGMIAEMKTGEGKTLVSTLAGYLNAIPGDGVHIVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLG+SVGL+Q GM +R Y D+TY NSE GFDYLRDN+ + M
Sbjct: 140 EWMGQIYRFLGMSVGLLQNGMKLSLKRPAYAADVTYGTNSEFGFDYLRDNMVTRAN---M 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R + HFAIVDEVDS+LIDE R PL+ISG +K + Y A+ L Q + + ++
Sbjct: 197 RVQRGHHFAIVDEVDSILIDEARTPLIISGAGTKSASIYKDFARAVRGLTQDVDFEMDEA 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+++ TE G+ E L +D++ D + + ALKA+ + RD QY+V +G+ I
Sbjct: 257 KHTIATTEVGLRKIESNLGVDDIYGDMSGQLVNHLQQALKAQYMFHRDQQYVVVDGEVKI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKEG+ ++ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 VDEFTGRIMEGRRYSEGLHQAIEAKEGVFVREENQTLATITLQNYFRLYDKLSGMTGTAM 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE+ EF +++ +PV +P+N P IR D + T K+ +V G+P LVG
Sbjct: 377 TEDAEFREIYSLPVQAIPSNKPVIREDHDDLVYQTIDAKFNAVADDVTKRHSQGQPCLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LS +L ++GI H VLNA K+ REA+ VAQAGR+ A+TI+TNMAGRGTDI
Sbjct: 437 TVSIESSERLSRILDKRGIEHEVLNA--KFHEREAQIVAQAGRENAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKII 410
+LGGNP LA++++
Sbjct: 495 LLGGNPDELAEELL 508
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 155/352 (44%), Gaps = 72/352 (20%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + C+ E V GGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +SL D
Sbjct: 526 ALEQAKATCATEREHVVAAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGETQFYLSLDD 585
Query: 576 EMFQKFSFD-TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F D ++++ DMPI+ + + + Q E+ F +RK+++++D
Sbjct: 586 DLMRLFGGDRMDRIAAMMTKYDMPPDMPIQAKMVTKAVESAQRKVEEINFSMRKNVLDYD 645
Query: 635 EVLEVQRKHVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+V+ QR+ +Y+ R IL G + E + F+ +Q V E +VD W L
Sbjct: 646 DVMNKQRQVIYEERNKILDGKDLVEHIADVTFETVQRRVAEFCSESVDVDD----WDLKG 701
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
L K + G+ DLP P
Sbjct: 702 LRKWVAELTGR----------------------------------ADLPPLP-------- 719
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
+NG + ++ Y+G + Y + R ++E+
Sbjct: 720 -----------------ENGDQQEIVEVVGDYVG----SCYKE--KSDRLSSEIIQELSA 756
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
V+++ +D W +L M+ L + + +R FG R+PL EYK + F +++
Sbjct: 757 QVMLRVIDTRWMAYLQEMDYLKTGIGLRGFGQRDPLVEYKTEAYAAFTELVN 808
>gi|289423342|ref|ZP_06425150.1| preprotein translocase, SecA subunit [Peptostreptococcus anaerobius
653-L]
gi|289156273|gb|EFD04930.1| preprotein translocase, SecA subunit [Peptostreptococcus anaerobius
653-L]
Length = 894
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 276/430 (64%), Gaps = 30/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MRHFRVQLIGGMVLHQGRIAEMKTGEGKTLVATCPVYLNALEGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +V+ FLGLSVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ+V
Sbjct: 139 DQMAKVYEFLGLSVGVIVHGQNPQVRKKQYECDITYGTNNEYGFDYLKDNMVIHEEQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+L+DE R PL+ISG K Y A V + + Y E K
Sbjct: 199 RG---LNYAIVDEVDSILVDEARTPLIISGPGDKSTHLYS-DANVFIMTLDEDDYEKEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTE GI AE+ ++ E+ + ALKA ++DV Y+ ++ + +I
Sbjct: 255 DKAVSLTESGIKKAEVYFNVENITTLEHTELYHHINQALKAHVIMKKDVDYVAKDDEIII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL IQ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSDGLHQAIEAKEGLTIQRESKTLATITFQNYFRMYSKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN P IR DL +A K+ +++E +PVLVG
Sbjct: 375 TEEEEFKSIYKMDVFQVPTNKPTIREDLADSVYANQMAKFHAVARDIEERHAKNQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS++L ++GI H VLNA KY +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSEILTERGIAHEVLNA--KYHEKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLA 406
+LGG+P +A
Sbjct: 493 LLGGSPAFMA 502
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
TY + +D + E EV + GGL +IGT HESRRIDNQLRGRAGRQGDPG++RF +
Sbjct: 540 TYKKLYEDFKKITDKEQEEVIKAGGLCIIGTERHESRRIDNQLRGRAGRQGDPGASRFYI 599
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
L D++ + F + L+ ++ D++ PIE + + + Q E FGIRK ++
Sbjct: 600 GLDDDLMRLFGSEKVQG--LLGKLGMDDETPIEHRMLTKSIENAQKKVEGKNFGIRKHVL 657
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
E+D+V+ QR+ +Y R+ +L+G E+ QI M+ V+
Sbjct: 658 EYDDVMNKQREIIYTERKRVLSG--ENLQDQIQDMMKDVI 695
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++++D W DH+ M++L + +R+ G +P+ YK++G F M
Sbjct: 765 MREVERIILLQSVDNHWIDHIDAMDQLRQGIGLRAIGQIDPVIAYKMEGFEMFDDMNKLI 824
Query: 867 RRLTVESL 874
R TV L
Sbjct: 825 REDTVAYL 832
>gi|251799707|ref|YP_003014438.1| preprotein translocase subunit SecA [Paenibacillus sp. JDR-2]
gi|247547333|gb|ACT04352.1| preprotein translocase, SecA subunit [Paenibacillus sp. JDR-2]
Length = 835
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 280/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEM+T V+TVNDYLA RD+
Sbjct: 80 MRHFDVQLMGGMVLHEGKIAEMRTGEGKTLVATLPTYLNALQGKGVHVITVNDYLASRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M ++ FLGL+VG G+ EE++ Y CDITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 QIMAELYNFLGLTVGCNLHGLTHEEKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AI+DEVDS+L+DE R PL+ISG+A K Y A + L Q YTV++K
Sbjct: 200 R---PLYYAIIDEVDSILVDEARTPLIISGQAQKSTELYYAADRFVTRLKQEEDYTVDIK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE G+ AE A +L+D N V ALKA RRDV Y+V + +I
Sbjct: 257 LRNVTLTEAGVDKAEKAFGIENLFDHANVTLNHHVQQALKAHVIMRRDVDYVVNEDEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE LK+Q +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMAGRRYSDGLHQAIEAKEQLKVQNESMTLATITFQNYFRMYRKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++ + VI++PTN IR D+ + + GK++ +E+ + +PVLVG
Sbjct: 377 TEEEEFKRIYGLEVIQIPTNRSLIRKDMQDVVYKSENGKFKAVVEEIVERHKNNQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+ENSE L+++LK++G+ H VLNA K+ A EAE +++AG+ ++TI+TNMAGRGTDI
Sbjct: 437 TISIENSERLAEMLKKRGVAHKVLNA--KFHAEEAEIISRAGQAGSVTIATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 LLG 497
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 9/168 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +SL+DE+ ++F +
Sbjct: 497 GEGVHDVGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYLSLEDELMRRFGAENIM 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ +ED PIE I R + Q E F RK ++++D+V+ QR+ +Y
Sbjct: 557 G--MMDRLGLEEDQPIESRLITRAVESAQKRVEGSNFDTRKVVLQYDDVMNQQREVIYKQ 614
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ +L N E + I ++ VV+ G++ P W L ++
Sbjct: 615 RRDVLYSENIREIVMEMIVPVIEHVVEAHTEGDI-----PEEWELQEI 657
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E E+ V+++ +D W DH+ M++L +++R++G +PL EY+ +G F M+ +
Sbjct: 708 MREFEKVVVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFKEMIYSI 767
Query: 867 RRLTVESLVQYW-SSPMESQEL 887
+ + +++ S +E QE+
Sbjct: 768 QEEVAKYIMKARVESNLERQEV 789
>gi|347734032|ref|ZP_08867084.1| preprotein translocase, SecA subunit [Desulfovibrio sp. A2]
gi|347517124|gb|EGY24317.1| preprotein translocase, SecA subunit [Desulfovibrio sp. A2]
Length = 844
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/424 (48%), Positives = 278/424 (65%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLVGGMVLHEGRIAEMKTGEGKTLVATLPVVLNAISGLGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGLSVG+I G+ EER++ Y DITY N+E GFDYLRDN+ QLV
Sbjct: 141 AWMGRLYNFLGLSVGVIVHGLSDEERKAAYGADITYGTNNEFGFDYLRDNMKFYPHQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG + Y + L H++V+ K
Sbjct: 201 R---EHNFAIVDEVDSILIDEARTPLIISGPSEDSTGLYRRVDDIIPRLSAETHFSVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVR-NGKAL 215
+ LT+EG+A E L ++L+D N + V+ ALKA +RRDV YIV + +
Sbjct: 258 ARTATLTDEGVAKCEELLGIDNLFDPGNITFQHHVLQALKAHHVFRRDVDYIVTPEEQVV 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE +K++A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 IVDEFTGRLMPGRRFSDGLHQALEAKEKVKVEAENQTLASITFQNYFRMYKKLAGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE EF +++ + VI +PTN P +R D P + T R K+E + + + G+PVLV
Sbjct: 378 DTEAVEFQQIYGLQVITIPTNKPMVRKDYPDSIYRTRREKFEAIVAAIGELHKSGQPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE LS +LK+ G+PHNVLNA K+ +EAE VAQAG++ +TI+TNMAGRGTD
Sbjct: 438 GTISIETSELLSAMLKKTGVPHNVLNA--KHHEQEAEIVAQAGQRGKVTIATNMAGRGTD 495
Query: 396 IILG 399
I+LG
Sbjct: 496 IVLG 499
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 161/342 (47%), Gaps = 76/342 (22%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ GGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 499 GEGVRESGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRLFGSDRIS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ +E PIE + R + Q E + F IRK+L+++D V+ QR+ +Y L
Sbjct: 559 G--LMQKLGMEEGEPIENRMVSRAIENAQKRVEGHNFEIRKTLLDYDNVMNQQREVIYTL 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ + M+A ++E A + +DD
Sbjct: 617 RRETM--------------MEADLEET--------------------------AVEFMDD 636
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
LF I GD E+ D + L R ++ R L + +
Sbjct: 637 LFDEIYGDA-----EQGKGSEGDDAKAYAMARL-----------RDVFNITRVLPLTDGN 680
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD--DVYMKEVERAVLVKTLDCFWRD 825
L R + L++++E + D +VY +++ R L++ +D W++
Sbjct: 681 LPDRETARG---------------AVLSILEELKRDTGEVY-RDIVRFFLLEEVDRCWKE 724
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
HL+NM+ L + +R +G R+P +EYK +G F ML R
Sbjct: 725 HLLNMDHLRDGIGLRGYGQRDPKQEYKREGFSLFQDMLFRVR 766
>gi|317487372|ref|ZP_07946162.1| preprotein translocase [Bilophila wadsworthia 3_1_6]
gi|316921368|gb|EFV42664.1| preprotein translocase [Bilophila wadsworthia 3_1_6]
Length = 852
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 279/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++G LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 82 MRHYDVQLLGAMALHNGKIAEMKTGEGKTLVATLAVILNSLEGKGVHVVTVNDYLAKRDA 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGLSVG+I G+ E+R+ Y DITY N+E GFDYLRDN+ +EQLV
Sbjct: 142 EWMGRLYNFLGLSVGVIVAGLSDEQRKEAYGADITYGTNNEFGFDYLRDNMKFYAEQLVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + Y +V L + HYTV+ K
Sbjct: 202 RG---HHYAIVDEVDSILIDEARTPLIISGASDESTDLYQKVDEVVRTLEKEKHYTVDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARF-VMNALKAKEFYRRDVQYIVRNGKALI 216
+ LT+EG+ E L +L+D + A+ V+ +LKA +RRDV YIV++ + +I
Sbjct: 259 GKTASLTDEGVLYVEEQLGIENLYDTANITAQHHVLQSLKAHTVFRRDVDYIVKDDQVVI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE + + A++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 319 VDEFTGRLMAGRRFSDGLHQALEAKEHVTVAAENQTLASITFQNYFRMYDKLSGMTGTAD 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V +P N P +R D+P + T R K + Q ++ + G+PVLVG
Sbjct: 379 TEAVEFAQIYGLEVSTIPPNRPMVRKDMPDLIYRTRREKMQAIIQAIKELHATGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S LLK++G+PH+VLNA K+ A+EAE VAQAG+ +TI+TNMAGRGTDI
Sbjct: 439 TISIETSELISQLLKREGVPHSVLNA--KHHAQEAEIVAQAGQAGKVTIATNMAGRGTDI 496
Query: 397 ILG 399
LG
Sbjct: 497 KLG 499
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 170/366 (46%), Gaps = 85/366 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 499 GEGVVELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRLFGSDRLS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ E PIE + + R + Q E ++F IRK+L+++D V+ QR +Y L
Sbjct: 559 G--LMQKLGMQEGEPIENNMVSRAIENAQKRVEGHHFEIRKTLLDYDNVMNQQRTVIYSL 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ D ++ P L+ +L E+++ +LDD
Sbjct: 617 RR------------------------------DLMQEP---DLEPILNEYLS---DLLDD 640
Query: 708 LFAGISGDTLLKSIEELPELNS-----IDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
++AG+ + IE+ + + ++I+ D P P R ++ L L+
Sbjct: 641 MYAGLEVSKAARDIEDEKPVRARLSEVMNIDRVLPGDAPLP------TREEAQEL--VLS 692
Query: 763 ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCF 822
I + LR+ G + Y D+ R L++ LD
Sbjct: 693 IMAQ--------------LREEAGPL-------------YADLL-----RYFLLEELDRG 720
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSS 880
W++HL NM+ L + +R +G R+P EYK +G F +L R +L V+
Sbjct: 721 WKEHLRNMDFLRDGIGLRGYGQRDPKLEYKREGFNMFQELLVHIREGAFRALTRVRVEQR 780
Query: 881 PMESQE 886
P E E
Sbjct: 781 PTEVAE 786
>gi|261420550|ref|YP_003254232.1| preprotein translocase subunit SecA [Geobacillus sp. Y412MC61]
gi|319768219|ref|YP_004133720.1| preprotein translocase subunit SecA [Geobacillus sp. Y412MC52]
gi|261377007|gb|ACX79750.1| preprotein translocase, SecA subunit [Geobacillus sp. Y412MC61]
gi|317113085|gb|ADU95577.1| preprotein translocase, SecA subunit [Geobacillus sp. Y412MC52]
Length = 837
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 282/427 (66%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YKVQIMGGVVLHEGDIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLATRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLG++VGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GKLYEFLGMTVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P ++AI+DEVDS+LIDE R PL+ISG A K Y A L + + YT + K S
Sbjct: 200 -PLYYAIIDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++
Sbjct: 259 VQLTEEGINKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ +++ + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPVIREDRPDLIYRTMEGKFRAVVEDIAARHAKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSEMLSEMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MMDRLGMDDSQPIQSKMVTKAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R +L N I + +Q+V++ ++ + + P W+L L++
Sbjct: 614 RYEVLDSDN--LRGIIEKMIQSVIERVVNAHTPKEEVPEEWNLKGLVE 659
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
M+E ER V+++ +D W +H+ M +L +++R++G +PL EY+++G F
Sbjct: 708 MREFERVVVLRAVDMKWMNHIDAMEQLRQGIHLRAYGQVDPLREYQMEGYAMF 760
>gi|315655988|ref|ZP_07908886.1| preprotein translocase subunit SecA [Mobiluncus curtisii ATCC
51333]
gi|315490052|gb|EFU79679.1| preprotein translocase subunit SecA [Mobiluncus curtisii ATCC
51333]
Length = 948
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 284/443 (64%), Gaps = 33/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHF QI+GGA LH G+IAEMKT VVTVNDYLA
Sbjct: 79 LRHFREQIMGGAALHWGNIAEMKTGEGKTLVATLPCYLRALSGKGVHVVTVNDYLASYQG 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+R+LGLS G+I M PEERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 ELMGRVYRYLGLSTGIIMAQMDPEERRKQYNCDITYGTNNEFGFDYLRDNMAQRVEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R ++ IVDEVDS+LIDE R PL+ISG A DV Y AK+ + L G Y V+
Sbjct: 199 R---EHNYIIVDEVDSILIDEARTPLIISGPAQGDVNHWYTDFAKIVQDLHPGEDYEVDQ 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKA 214
K +V + E GI E L ++L++ N P F+ NA+KAKE ++ D YIV G+
Sbjct: 256 KKRTVGVLEPGIDKVEDYLGIDNLYEVANTPLIGFLNNAIKAKELFKLDKDYIVTPEGEV 315
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS--GMT 272
LI++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ +LYPK S GMT
Sbjct: 316 LIVDEHTGRVLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYVRLYPKGSRAGMT 375
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA+TE EF +++M V+ +PT+ P IR D + TA K+ +++E + G+P
Sbjct: 376 GTAETEAAEFNDVYKMGVVPIPTHKPMIREDKDDLVYKTAEAKFNAVVEDIEENYHRGQP 435
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TSVE SEYLS LL Q+ IPH VLNA K REA VA AGRK +T++TNMAGR
Sbjct: 436 VLVGTTSVEKSEYLSHLLNQRKIPHQVLNA--KQHEREAAVVAMAGRKGQVTVATNMAGR 493
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGN + LA + ++DR L
Sbjct: 494 GTDIMLGGNAEFLAVQTLKDRGL 516
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 179/372 (48%), Gaps = 74/372 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L++ + + E EV LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +S++D
Sbjct: 532 ALQEAKAKVAQEHDEVVELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGRSRFYLSMED 591
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ +F+ + W +++ R ED+P+E + + Q E IRK+++++D+
Sbjct: 592 ELM-RFA-NQGWLGNMM-RSGLPEDIPLEFKMVSGAIRSAQTQVEGRNAEIRKNVLKYDD 648
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V+ QR+ +Y R +L G + + A VD I G +
Sbjct: 649 VMTEQRETIYGERGRVLRGED----------LSATVDSFIEGTI---------------- 682
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
D + ++ +LP++N D+ + NL+
Sbjct: 683 ------------------ADAVAQAT-DLPDVNDWDLKTLW----AGLKNLYP------- 712
Query: 756 SLKRWLAICSDDLTK--NGRYRATTNLLRKYLGDI------LIASYL--NVVQESRYDDV 805
+++ +DL G+ TT+ + + L D L A L N + +++ D
Sbjct: 713 -----VSLSVEDLENAVGGKSALTTDFITEQLVDDAKLQYELAAKSLAENPIAQAQLGDE 767
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
MKE+ER VL+ +D WR+HL M+ L + +R+ G RNPL EYK +G F +M
Sbjct: 768 PMKELERRVLLSVVDRLWREHLYEMDYLKEGIGLRAMGQRNPLVEYKTEGYLMFSAMTGR 827
Query: 866 TRRLTVESLVQY 877
+ TV+++ Y
Sbjct: 828 IKEETVQNVFGY 839
>gi|172058433|ref|YP_001814893.1| Preprotein translocase subunit SecA [Exiguobacterium sibiricum
255-15]
gi|171990954|gb|ACB61876.1| preprotein translocase, SecA subunit [Exiguobacterium sibiricum
255-15]
Length = 839
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/423 (49%), Positives = 276/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+ VQ+IGG VLH+G IAEMKT V+TVN+YLA+RD
Sbjct: 79 MRHYRVQLIGGYVLHNGDIAEMKTGEGKTLVATLPVYLNALAGNGVHVITVNEYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ ME ++ LGLSVGL M +E+++ Y CDITY N+E GFDYLRDN+ E V
Sbjct: 139 DIMEPLYAALGLSVGLNLSSMSRQEKQAAYSCDITYGTNNEFGFDYLRDNMVLYKEDRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FA+VDEVDS+L+DE R PL+ISG A K A Y A A+++ YTV++K
Sbjct: 199 R---PLYFAVVDEVDSILVDEARTPLIISGSAEKSTALYSQADMFAKMMKADEDYTVDIK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE+GI AE ++L+ ++ + AL+A RDV Y+VR + +I
Sbjct: 256 TKSVLLTEQGIDRAEKYFGIDNLFALDHIALNHHLSLALRANSVMHRDVDYMVREDEVMI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I++ TGRV E RR+SEG+HQA+EAKEG++IQ +S+ +A ITYQ+ F++Y KL+GMTGTAK
Sbjct: 316 IDQFTGRVMEGRRYSEGLHQAIEAKEGVEIQRESMTLATITYQNFFRMYTKLAGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V+ VPTN P +R D P F T GK+ E+E R G+PVLVG
Sbjct: 376 TEEEEFRNIYNMHVVPVPTNKPIVRDDQPDLIFKTMNGKFAAVADEIERAHREGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE LS +LK++GI H VLNA K AREAE + AG+ A+TI+TNMAGRGTDI
Sbjct: 436 TVAVETSELLSSILKKRGIRHEVLNA--KNHAREAEIIENAGQPNAVTIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 16/191 (8%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V GGL+++GT HESRRIDNQLRGRAGRQGDPG+++F +SL+DE+ ++F D+
Sbjct: 496 GQGVIEKGGLYILGTERHESRRIDNQLRGRAGRQGDPGASQFYLSLEDELMRRFGSDSLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PIE + R + Q E F RK ++ +D V+ QRK +Y
Sbjct: 556 S--MMDRLGMDDSQPIESRMVSRAVESAQKRVEGNNFDARKQVLGYDNVMADQRKVMYAD 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVD---PLKH-PRYWSLDKLLK---EFIAI 700
R +IL +Q + ++ +V++ I V P++ P WS+ L + + +A+
Sbjct: 614 RAAILD------AQSVSDIVRPMVEQTIEAGVHQYTPIEFVPEEWSIAALAEWANQTLAL 667
Query: 701 AGKILD-DLFA 710
K+ + DLF
Sbjct: 668 EEKVSEQDLFG 678
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
E E+ ++++ +D W +H+ M++L +++R++G +PL EY+ +G F +M +A
Sbjct: 710 EFEKVIVLRAVDQHWMNHIDQMDQLREGIHLRAYGQNDPLREYQSEGSMMFDTMNAA 766
>gi|120612333|ref|YP_972011.1| preprotein translocase subunit SecA [Acidovorax citrulli AAC00-1]
gi|171769197|sp|A1TTE9.1|SECA_ACIAC RecName: Full=Protein translocase subunit SecA
gi|120590797|gb|ABM34237.1| protein translocase subunit secA [Acidovorax citrulli AAC00-1]
Length = 922
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/468 (46%), Positives = 289/468 (61%), Gaps = 51/468 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G I+EM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLLGGMALHHGKISEMRTGEGKTLTATLPVYLNALGGKGVHVVTVNDYLANRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGL+VG+ M EE+++ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 RWMGRLYNFLGLTVGINLPQMPREEKQAAYAADITYGTNNEYGFDYLRDNMVYEARDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R +FAIVDEVDS+LIDE R PL+ISG+A A Y KV LLV
Sbjct: 201 R---ALNFAIVDEVDSILIDEARTPLIISGQAEDHTAMYIAMNKVVPLLVRQEGEADPRT 257
Query: 148 -QGL----HYTVELKNNSVELTEEGIALAEMALETNDLWDEN----DPWARFVMN----A 194
+G+ +T++ K++ V LTE+G AE L L E DP +M+ A
Sbjct: 258 GEGVTKPGDFTIDEKSHQVFLTEQGHETAERVLAAQGLIPEGASLYDPSHITLMHHLYAA 317
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
L+A Y RD Y+V+NG+ +I++E TGR+ RRWSEG+HQAVEAKEG++IQA++ +A
Sbjct: 318 LRANHLYHRDQHYVVQNGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIQAENQTLA 377
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT+Q+ F+LY KLSGMTGTA TE EF +++ + + +P N P+ R D + + T R
Sbjct: 378 SITFQNYFRLYSKLSGMTGTADTEAYEFQEIYGLETVVIPPNRPSKRDDQLDRVYKTTRE 437
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K+E A Q++ G+PVLVG+TS+ENSE + DLL + G+PH VLNA K AREA+ V
Sbjct: 438 KYEAAIQDIRECHERGQPVLVGTTSIENSEIIDDLLNKAGLPHQVLNA--KQHAREADIV 495
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREA 422
AQAGR ITI+TNMAGRGTDI+LGGN + I +D L T++A
Sbjct: 496 AQAGRAGMITIATNMAGRGTDIVLGGNIEKEVAAIEDDESLDEATKQA 543
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
+ +VK LGGL +I T HESRRIDNQLRGR+GRQGDPGS+RF +SL D + + F+ +
Sbjct: 555 DNEKVKALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLMRIFAGERV 614
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A+ + R+ + IE + R + Q E F IRK L+E+D+V QRK +Y
Sbjct: 615 RAI--MERLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQ 672
Query: 647 LRQSILTGAN---------ESCSQQIF-QYM 667
R IL A+ ESC I QY+
Sbjct: 673 QRNEILDAADLSGVIAGMRESCLTDIVRQYV 703
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +RAVL+++ D WRDHL ++ L +++R + + P +EYK + F ++ +
Sbjct: 772 QFQRAVLLQSFDSNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVK 830
>gi|297531362|ref|YP_003672637.1| preprotein translocasesubunit SecA [Geobacillus sp. C56-T3]
gi|375010252|ref|YP_004983885.1| protein translocase subunit secA 1 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239364|ref|YP_007403422.1| preprotein translocase ATPase subunit [Geobacillus sp. GHH01]
gi|297254614|gb|ADI28060.1| preprotein translocase, SecA subunit [Geobacillus sp. C56-T3]
gi|359289101|gb|AEV20785.1| Protein translocase subunit secA 1 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445208206|gb|AGE23671.1| preprotein translocase ATPase subunit [Geobacillus sp. GHH01]
Length = 837
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 282/427 (66%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YKVQIMGGVVLHEGDIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLATRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLG++VGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GKLYEFLGMTVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P ++AI+DEVDS+LIDE R PL+ISG A K Y A L + + YT + K S
Sbjct: 200 -PLYYAIIDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++
Sbjct: 259 VQLTEEGINKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ +++ + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPVIREDRPDLIYRTMEGKFRAVVEDIAARHAKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSEMLSEMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MMDRLGMDDSQPIQSKMVTKAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R +L N I + +Q+V++ ++ + + P W+L L++
Sbjct: 614 RYEVLDSDN--LRGIIEKMIQSVIERVVNAHTPKEEVPEEWNLKGLVE 659
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
M+E ER V+++ +D W +H+ M +L +++R++G +PL EY+++G F
Sbjct: 708 MREFERVVVLRAVDMKWMNHIDAMEQLRQGIHLRAYGQVDPLREYQMEGYAMF 760
>gi|422338944|ref|ZP_16419904.1| preprotein translocase, SecA subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355372071|gb|EHG19414.1| preprotein translocase, SecA subunit [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 880
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGMVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ +L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEEILKIENLYAPEYVELTHFLHQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 69/343 (20%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D++ + F
Sbjct: 550 QCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLEDDLMRLFG 609
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ + + R+ E PI I + Q E FGIRK+L+EFD+V+ QR
Sbjct: 610 --SERVMVWMDRLKLPEGEPITHGMINSAIEKAQKKIEARNFGIRKNLLEFDDVMNKQRT 667
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
+Y+ R NE+ + +D LK
Sbjct: 668 AIYESR-------NEALA------------------IDNLKD------------------ 684
Query: 703 KILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
+I+ L I+ K E+ E ID N Y D ++
Sbjct: 685 RIMGMLHRNITEKVYEKFAPEMREDWDIDGLNEYLKDF-------------------YVY 725
Query: 763 ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCF 822
+DD R+T + + + L+ Y N +E+ M+++E+ +L +D
Sbjct: 726 EEADD---KAYLRSTKEEYAERIYNALVEQYNN--KEAELGSDLMRKLEKHILFDVVDNR 780
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 781 WRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|345023053|ref|ZP_08786666.1| preprotein translocase subunit SecA [Ornithinibacillus scapharcae
TW25]
Length = 837
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/423 (46%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQI+G VLH+G+I+EMKT V+TVNDYLA+RD+
Sbjct: 79 MRPFQVQIMGAIVLHEGNISEMKTGEGKTLASTMPAYLNAISGEGVHVITVNDYLAERDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M ++ FLGL VGL G+ EE+R Y+ DITY N+E GFDYLRDN+ +Q+V
Sbjct: 139 KQMGQLFEFLGLKVGLNTNGLSKEEKREAYQADITYGTNNEFGFDYLRDNMVLYKDQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AI+DEVDS+LIDE R PL+ISG A K + Y A L + YT + K
Sbjct: 199 R---PLNYAIIDEVDSILIDEARTPLIISGSAQKSASLYTQANSFVTTLKRDTDYTYDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V+LTE+GI AE +L+D N + AL+A RD Y+V +G+ +I
Sbjct: 256 TKGVQLTEDGINKAESYFNVENLFDLNHVTLTHHIGQALRAHVSMHRDTDYVVEDGEVVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+S+G+HQA+EAKEGLKIQ +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 316 VDQFTGRLMKGRRYSDGLHQAIEAKEGLKIQNESMTLASITFQNFFRMYNKLAGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V+ +PTN P RVD P + ++T GK++ ++++ +LG+PVLVG
Sbjct: 376 TEEEEFRSIYNMNVVAIPTNKPISRVDYPDKIYSTMNGKFKAVVEDIKERNKLGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S LK+ G+ H+VLNA+ Y REAE + AG+K A+TI+TNMAGRGTDI
Sbjct: 436 TVAVETSELISQYLKKAGVKHDVLNAKNHY--REAEIIEHAGQKGAVTIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +S++DE+ ++F D
Sbjct: 496 GEGVLELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGLSQFYLSMEDELMRRFGSDNLK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ ++ D+ PI + R + Q E + RK+++ +D+VL QR+ +Y
Sbjct: 556 A--MMDKMGMDDSQPIVNKFVSRAVESAQKRVEGNNYDARKNVLAYDDVLREQREIIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R ++ I + + ++ +I + P W L +++ + G +LD
Sbjct: 614 RFEVIDAEGNELRTIIESMISSSLERVIHSHA-PEDEEEKWDLQAIVE---YVHGNLLDQ 669
Query: 708 LFAGISGDTLL-KSIEELPEL 727
+S D L K EE+ EL
Sbjct: 670 --DSLSVDELKGKETEEIHEL 688
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
++E E+ +L++T+D W DH+ M++L +++R++G +PL EY+++G F M+ A
Sbjct: 709 IREFEKVILLRTVDTKWMDHIDQMDQLRQGIHLRAYGQNDPLREYQLEGFAMFEGMVEA 767
>gi|145225283|ref|YP_001135961.1| preprotein translocase subunit SecA [Mycobacterium gilvum PYR-GCK]
gi|145217769|gb|ABP47173.1| protein translocase subunit secA [Mycobacterium gilvum PYR-GCK]
Length = 933
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 285/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HFDVQ++GGA LH G++AEMKT +VTVN+YLA+RDAE
Sbjct: 79 KHFDVQVMGGAALHFGNVAEMKTGEGKTLTSVLPAYLNALTGKGVHIVTVNEYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL V +I + P++RR+ Y DITY N ELGFDYLRDN+A E V R
Sbjct: 139 QMGRVHRFLGLDVDVILGTLTPDQRRAAYNADITYGTNWELGFDYLRDNMALRLEDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V++K
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADGGSNWYTEFARLAPLMEKDVHYEVDIKK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V + E G+ E L +L++ N P ++ NA+KAKE + RD YIVRNG+ I+
Sbjct: 256 RVVGINEIGVEFVEDQLGIENLYEAANSPLISYLNNAIKAKELFERDKHYIVRNGEVFIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ VAQIT Q+ F++Y KL+GMTGTA+T
Sbjct: 316 DEFTGRMLVGRRYNEGLHQAIEAKEHVEIKAENQTVAQITLQNYFRMYNKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 376 EAAELHEIYKLGVVPIPTNRPMIRADQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS +++ IPHNVLNA K+ +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 436 TSVERSEFLSRQFEKRRIPHNVLNA--KFHEQEAGIIAEAGRLGAITVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + R L
Sbjct: 494 LGGNVDYLLDRRLRQRGL 511
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 100/173 (57%), Gaps = 9/173 (5%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 QVAEEAKDVIAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLADELMRRFN 593
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
T L++R+ +D+PIE + R + Q E+ F IRK ++++DEV+ QRK
Sbjct: 594 GATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFDIRKEVLKYDEVMNQQRK 651
Query: 643 HVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R+ IL G N + Q + + A VD + W L+KL
Sbjct: 652 VIYAERRRILEGENLRDQAEQMLVDVVTAYVD-----GATSEGYSEDWDLEKL 699
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ LD WR+HL M+ L + +R + P EY +G FI ML
Sbjct: 761 MRQLERNVLLNVLDRKWREHLYEMDYLREGIGLRGLAQQRPEVEYAREGYDMFIGMLDGM 820
Query: 867 RRLTVESLVQYWSSP 881
+ +V L P
Sbjct: 821 KEESVGFLFNVQVEP 835
>gi|340795127|ref|YP_004760590.1| preprotein translocase subunit [Corynebacterium variabile DSM
44702]
gi|340535037|gb|AEK37517.1| preprotein translocase subunit [Corynebacterium variabile DSM
44702]
Length = 852
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 280/436 (64%), Gaps = 26/436 (5%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G +AEMKT VVTVNDYLA+RD+E
Sbjct: 80 KHYKVQIMGGAALHWGYVAEMKTGEGKTLTCVLPAYLNALSGKGVHVVTVNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVHRFLGL +I G P ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 140 WMGRVHRFLGLGTDVILSGKKPAERRDAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG + +++ + + Y V+ +
Sbjct: 200 KDHSHNFAIVDEVDSILIDEARTPLIISGPVGGSSQWFTAFSRIVPKMTLDIDYEVDRRK 259
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NA+KAKE + +D YIVRNG+ +I+
Sbjct: 260 KTIGVREEGVEFVEDQLGIDNLYSPEHSQLVSYLNNAIKAKELFTKDKDYIVRNGEVMIV 319
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 320 DEFTGRILQGRRYNEGMHQAIEAKENVEIKNENQTLATVTLQNYFRLYDKLAGMTGTAET 379
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++++ V ++PTN N R D + T K+ +++ G+PVLVG+
Sbjct: 380 EAAELKSIYKLDVAQIPTNKANQRTDDIDLVYKTQEAKFAAVAEDIAERVEKGQPVLVGT 439
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL+ Q I H+VLNA KY ++EAE +AQAGR A+T++TNMAGRGTDI+
Sbjct: 440 TSVERSEYLSKLLQAQHIRHSVLNA--KYHSQEAEIIAQAGRLKAVTVATNMAGRGTDIV 497
Query: 398 LGGNPKMLAKKIIEDR 413
LGGNP ++ + +R
Sbjct: 498 LGGNPDIICDITLRER 513
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 21/210 (10%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V+ +GGL+V+GT HESRRIDNQLRGR+ RQGDPG TRF +S++D++ +F T
Sbjct: 542 EAEKVREVGGLYVLGTERHESRRIDNQLRGRSARQGDPGETRFYLSMRDDLMTRFVGQTM 601
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A L++R+ +DMPI+ + + G Q E F +RK+++++DEVL QRK +Y
Sbjct: 602 EA--LMTRLNVPDDMPIDSKMVSNAIKGAQSQVENSNFEMRKNVLKYDEVLNEQRKVIYG 659
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGK 703
R+ IL G E Q+ +A++D+ I VD Y W L++L A+ G
Sbjct: 660 ERRQILEG--EDVRDQV----RAMMDDTIAAYVDGATAEGYVEDWDLEELWNALDALYGP 713
Query: 704 ILD--DLFAG--------ISGDTLLKSIEE 723
+ DL G +S LLK+++E
Sbjct: 714 GVKARDLIDGDEFGRAGELSASQLLKALQE 743
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++++ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 765 IRQMERGVLLNVVDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGGDMFRRMNDGI 824
Query: 867 RRLTVESL 874
+ T+ L
Sbjct: 825 KEETIRQL 832
>gi|315656137|ref|ZP_07909028.1| preprotein translocase subunit SecA [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315493139|gb|EFU82739.1| preprotein translocase subunit SecA [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 948
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 284/443 (64%), Gaps = 33/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHF QI+GGA LH G+IAEMKT VVTVNDYLA
Sbjct: 79 LRHFREQIMGGAALHWGNIAEMKTGEGKTLVATLPCYLRALSGKGVHVVTVNDYLASYQG 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+R+LGLS G+I M PEERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 139 ELMGRVYRYLGLSTGIIMAQMDPEERRKQYNCDITYGTNNEFGFDYLRDNMAQRVEDLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R ++ IVDEVDS+LIDE R PL+ISG A DV Y AK+ + L G Y V+
Sbjct: 199 R---EHNYIIVDEVDSILIDEARTPLIISGPAQGDVNHWYTDFAKIVQDLHPGEDYEVDQ 255
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKA 214
K +V + E GI E L ++L++ N P F+ NA+KAKE ++ D YIV G+
Sbjct: 256 KKRTVGVLEPGIDKVEDYLGIDNLYEVANTPLIGFLNNAIKAKELFKLDKDYIVTPEGEV 315
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS--GMT 272
LI++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ +LYPK S GMT
Sbjct: 316 LIVDEHTGRVLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYVRLYPKGSRAGMT 375
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA+TE EF +++M V+ +PT+ P IR D + TA K+ +++E + G+P
Sbjct: 376 GTAETEAAEFNDVYKMGVVPIPTHKPMIREDKDDLVYKTAEAKFNAVVEDIEENYHRGQP 435
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TSVE SEYLS LL Q+ IPH VLNA K REA VA AGRK +T++TNMAGR
Sbjct: 436 VLVGTTSVEKSEYLSHLLNQRKIPHQVLNA--KQHEREAAVVAMAGRKGQVTVATNMAGR 493
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGN + LA + ++DR L
Sbjct: 494 GTDIMLGGNAEFLAVQTLKDRGL 516
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 74/372 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L++ + + E EV LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +S++D
Sbjct: 532 ALQEAKAKVAQEHDEVVELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGRSRFYLSMED 591
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ +F+ + W +++ R ED+P+E + + Q E IRK+++++D+
Sbjct: 592 ELM-RFA-NQGWLGNMM-RSGLPEDIPLEFKMVSGAIRSAQTQVEGRNAEIRKNVLKYDD 648
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V+ QR+ +Y R +L G + + A VD I G +
Sbjct: 649 VMTEQRETIYGERGRVLRGED----------LSATVDSFIEGTI---------------- 682
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
D + ++ +LP+++ D+ + NL+
Sbjct: 683 ------------------ADAVAQAT-DLPDVSDWDLKTLW----AGLKNLYP------- 712
Query: 756 SLKRWLAICSDDLTK--NGRYRATTNLLRKYLGDI------LIASYL--NVVQESRYDDV 805
+++ +DL G+ TT+ + + L D L A L N + +++ D
Sbjct: 713 -----VSLSVEDLENAVGGKSALTTDFITEQLVDDAKLQYELAAKSLAENPIAQAQLGDE 767
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
MKE+ER VL+ +D WR+HL M+ L + +R+ G RNPL EYK +G F +M
Sbjct: 768 PMKELERRVLLSVVDRLWREHLYEMDYLKEGIGLRAMGQRNPLVEYKTEGYLMFSAMTGR 827
Query: 866 TRRLTVESLVQY 877
+ TV+++ Y
Sbjct: 828 IKEETVQNVFGY 839
>gi|254303499|ref|ZP_04970857.1| IISP family type II (general) secretory pathway protein SecA
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323691|gb|EDK88941.1| IISP family type II (general) secretory pathway protein SecA
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 880
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/453 (46%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGMVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ +L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEEILKIENLYAPEYVELTHFLHQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDNADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++GIPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRGIPHNVLNA--KYHAQEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 69/343 (20%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D++ + F
Sbjct: 550 QCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLEDDLMRLFG 609
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ + + R+ E PI I + Q E FGIRK+L+EFD+V+ QR
Sbjct: 610 --SERVMVWMDRLKLPEGEPITHGMINSAIEKAQKKIEARNFGIRKNLLEFDDVMNKQRT 667
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
+Y+ R NE+ + +D LK
Sbjct: 668 AIYESR-------NEALA------------------IDNLKD------------------ 684
Query: 703 KILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
+I+ L I+ K E+ E ID N Y D ++
Sbjct: 685 RIMGMLHRNITEKVYEKFAPEMREDWDIDGLNEYLKDF-------------------YVY 725
Query: 763 ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCF 822
+DD R+T + + + L+ Y N +E+ M+++E+ +L +D
Sbjct: 726 EEADD---KAYLRSTKEEYAERIYNALVEQYNN--KEAELGSDLMRKLEKHILFDVVDNR 780
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 781 WRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|455649581|gb|EMF28385.1| preprotein translocase subunit SecA [Streptomyces gancidicus BKS
13-15]
Length = 946
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/460 (46%), Positives = 292/460 (63%), Gaps = 51/460 (11%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHMGYVAEMKTGEGKTLVGTLPAYLNALSGEGVHIITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHRFLGLSVGCILASMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL--------VQGL 150
+FAIVDEVDS+LIDE R PL+ISG A + Y AK+ + L ++GL
Sbjct: 200 G---HNFAIVDEVDSILIDEARTPLIISGPADQATKWYGDFAKLVKRLKRGEPGNPLKGL 256
Query: 151 H----YTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE ++RD
Sbjct: 257 EETGDYDVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKRDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y++ + + +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVIIDDEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVPIKDENQTLATITLQNFFRLY 376
Query: 266 ----------PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
P LSGMTGTA TE EF +++++ V+ +PTN P +R D + T K
Sbjct: 377 KRHDHDGKEMPGLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAK 436
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+E ++E R G+P+LVG+TSVE SEYLS L ++GI H VLNA K REA+ VA
Sbjct: 437 FEAVVDDIEEKHRKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KQHDREAQIVA 494
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
QAGR+ A+T++TNMAGRGTDI LGGNP+ LA+ + R L
Sbjct: 495 QAGRRGAVTVATNMAGRGTDIKLGGNPEDLAEAELRQRGL 534
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L E E EV++LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 550 ALARAEQAVKAEKEEVEKLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 609
Query: 576 EMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F + V+ + + N +D+PIE + R + Q E F RK+++++D
Sbjct: 610 DLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVETQNFETRKNVLKYD 666
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EVL QR+ +Y R+ +L G E +QI +M +D + P W LD+L
Sbjct: 667 EVLNRQREVIYGERRRVLEG--EDLQEQIHHFMDDTIDAYVQAET-AEGFPEDWDLDRLW 723
Query: 695 KEF 697
F
Sbjct: 724 GAF 726
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T + + + D + A Y +E++ M+E+ER V++ LD WR+HL M+ L
Sbjct: 750 TAEFISESIKDDIRAQY--EARETQLGSEIMRELERRVVLSVLDRKWREHLYEMDYLQEG 807
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ ++PL EY+ +G F +M+ + +V
Sbjct: 808 IGLRAMAQKDPLVEYQREGFDMFSAMMDGIKEESV 842
>gi|56421642|ref|YP_148960.1| preprotein translocase subunit SecA [Geobacillus kaustophilus
HTA426]
gi|81819617|sp|Q5KV94.1|SECA1_GEOKA RecName: Full=Protein translocase subunit SecA 1
gi|56381484|dbj|BAD77392.1| preprotein translocase subunit (ATPase, RNA helicase) [Geobacillus
kaustophilus HTA426]
Length = 837
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 282/427 (66%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG VLH+G IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YKVQIMGGVVLHEGDIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLATRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLG++VGL GM EE+++ Y DITY N+E GFDYLRDN+ E +V R
Sbjct: 142 GKLYEFLGMTVGLNLSGMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHIVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P ++AI+DEVDS+LIDE R PL+ISG A K Y A L + + YT + K S
Sbjct: 200 -PLYYAIIDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++
Sbjct: 259 VQLTEEGINKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK+ +++ + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMRVVVIPTNRPVIREDRPDLIYRTMEGKFRAVVEDIAARHAKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE LS++LK++GIPHNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSEMLSEMLKKRGIPHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F ++
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSESLM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MMDRLGMDDSQPIQSKMVTRAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R +L N I + + +V++ ++ + + P W+L L++
Sbjct: 614 RYEVLDSDN--LRGIIEKMIHSVIERVVNAHTPKEEVPEEWNLKGLVE 659
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
M+E ER V+++ +D W H+ M +L +++R++G +PL EY+++G F
Sbjct: 708 MREFERVVVLRAVDMKWMHHIDAMEQLRQGIHLRAYGQVDPLREYQMEGYAMF 760
>gi|257069202|ref|YP_003155457.1| protein translocase subunit secA [Brachybacterium faecium DSM 4810]
gi|256560020|gb|ACU85867.1| protein translocase subunit secA [Brachybacterium faecium DSM 4810]
Length = 985
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/439 (48%), Positives = 281/439 (64%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQI+GG LH G IAEMKT +VTVNDYLA ++
Sbjct: 81 RPYDVQIMGGTALHRGRIAEMKTGEGKTLVATLPAYLNALSGKGVHIVTVNDYLAGYQSD 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV RFLGL+ G+I+ GM P ERR Y DITY N+E GFDYLRDN++ E V R
Sbjct: 141 LMGRVFRFLGLTTGVIKSGMTPAERREQYAADITYGTNNEFGFDYLRDNMSLKPEDRVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
FAIVDEVDS+LIDE R PL+ISG S D + + AKV +LL + Y V+ K
Sbjct: 201 G---HAFAIVDEVDSILIDEARTPLIISGPGSGDANKWFSEFAKVVKLLRRDRDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y+V NG+ +I
Sbjct: 258 KRTVGVLESGIDKVEDHLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVLNGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+KI+A++ +A IT Q+ FKLY KLSGMTGTA+
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVKIKAENQTLATITLQNYFKLYEKLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF+ +++ V+ +PT+ P R D P + + T + K++ +++ G+PVLVG
Sbjct: 378 TEAAEFMNTYELGVVPIPTHRPMQRADEPDRIYRTEKAKFDAVVEDIVGRHEKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SEYL LL QG+ H VLNA K A EA VA AG K A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSEYLGKLLTAQGVQHEVLNA--KNHAGEAAIVAMAGAKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + +A +E R L
Sbjct: 496 MLGGNVEFMAHAELEKRGL 514
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ + EV +GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD++ + F
Sbjct: 538 VAEQHDEVVEVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDDLMR--LF 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
++ A L++R DE +P+ G + + Q S E IRK+++++D+VL QRK
Sbjct: 596 NSGAAESLLARGGVDESIPLTGRMVTGAIQRAQNSIESRNAEIRKNVLKYDDVLTKQRKK 655
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
Y+ R IL G +++ +++ +DE+I G VD
Sbjct: 656 FYEERGRILEG------EELEPHIERFIDEVIGGTVD 686
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+++++R VL+ LD WR+HL M+ L + +R+ R+PL EY+ +G F M++
Sbjct: 758 LQQLQRRVLLSVLDRRWREHLYEMDYLKEGIGLRAMAQRDPLIEYEREGHLMFNDMMAGV 817
Query: 867 RRLTVESLVQY 877
+ E +V Y
Sbjct: 818 K----EDVVGY 824
>gi|315445580|ref|YP_004078459.1| protein translocase subunit secA [Mycobacterium gilvum Spyr1]
gi|315263883|gb|ADU00625.1| protein translocase subunit secA [Mycobacterium gilvum Spyr1]
Length = 933
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 285/438 (65%), Gaps = 29/438 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+HFDVQ++GGA LH G++AEMKT +VTVN+YLA+RDAE
Sbjct: 79 KHFDVQVMGGAALHFGNVAEMKTGEGKTLTSVLPAYLNALTGKGVHIVTVNEYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL V +I + P++RR+ Y DITY N ELGFDYLRDN+A E V R
Sbjct: 139 QMGRVHRFLGLDVDVILGTLTPDQRRAAYNADITYGTNWELGFDYLRDNMALRLEDCVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V++K
Sbjct: 199 G---HNFAIVDEVDSILIDEARTPLIISGPADGGSNWYTEFARLAPLMEKDVHYEVDIKK 255
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V + E G+ E L +L++ N P ++ NA+KAKE + RD YIVRNG+ I+
Sbjct: 256 RVVGINEIGVEFVEDQLGIENLYEAANSPLISYLNNAIKAKELFERDKHYIVRNGEVFIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR++EG+HQA+EAKE ++I+A++ VAQIT Q+ F++Y KL+GMTGTA+T
Sbjct: 316 DEFTGRMLVGRRYNEGLHQAIEAKEHVEIKAENQTVAQITLQNYFRMYNKLAGMTGTAET 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ V+ +PTN P IR D + T K+ +V + G+PVL+G+
Sbjct: 376 EAAELHEIYKLGVVPIPTNRPMIRADQSDLIYKTEEAKYIAVVDDVVERYEKGQPVLIGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SE+LS +++ IPHNVLNA K+ +EA +A+AGR AIT++TNMAGRGTDI+
Sbjct: 436 TSVERSEFLSRQFEKRRIPHNVLNA--KFHEQEAGIIAEAGRLGAITVATNMAGRGTDIV 493
Query: 398 LGGNPKMLAKKIIEDRLL 415
LGGN L + + R L
Sbjct: 494 LGGNVDYLLDRRLRQRGL 511
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 100/173 (57%), Gaps = 9/173 (5%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
+ E +V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 534 QVAEEAKDVIAAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLADELMRRFN 593
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
T L++R+ +D+PIE + R + Q E+ F IRK ++++DEV+ QRK
Sbjct: 594 GATLET--LLTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFDIRKEVLKYDEVMNQQRK 651
Query: 643 HVYDLRQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
+Y R+ IL G N + Q + + A VD + W L+KL
Sbjct: 652 VIYAERRRILEGENLRDQAEQMLVDVVTAYVD-----GATSEGYSEDWDLEKL 699
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+++ER VL+ LD WR+HL M+ L + +R + P EY +G FI ML
Sbjct: 761 MRQLERNVLLNVLDRKWREHLYEMDYLREGIGLRGLAQQRPEVEYAREGYDMFIGMLDGM 820
Query: 867 RRLTVESLVQYWSSPM 882
+ +V L P+
Sbjct: 821 KEESVGFLFNVQVEPV 836
>gi|340756620|ref|ZP_08693225.1| translocase subunit secA [Fusobacterium varium ATCC 27725]
gi|251833883|gb|EES62446.1| translocase subunit secA [Fusobacterium varium ATCC 27725]
Length = 894
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 288/452 (63%), Gaps = 51/452 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH+G I EMKT ++TVNDYLA RD
Sbjct: 81 LRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATCPVYLNALTGKGVHIITVNDYLAARDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+ FLGLS G+I G+ ++R+ Y DITY NSE GFDYLRDN+ + E+ V
Sbjct: 141 DMMGRVYDFLGLSSGVILNGISTDQRKEAYNSDITYGTNSEFGFDYLRDNMVGSIEERVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL-----VQGLH- 151
R ++ IVDEVDS+LIDE R PL+ISG A++ + Y + ++ +L +G+
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGAATESIKWYKIFYQIVSMLSRSYETEGIKD 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
Y V+ K ++ LTE+G+ E L+ ++L+ EN ++ A
Sbjct: 258 IKAKKEMNIPLEKWGDYEVDEKAKNIVLTEKGVTKVEKLLKIDNLYSPENVELTHYLNQA 317
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
LKAKE ++RD Y+VR G+ +II+E TGR E RR+S+G+HQA+EAKEG+ I ++ +A
Sbjct: 318 LKAKELFKRDRDYLVREGQVIIIDEFTGRAMEGRRYSDGLHQAIEAKEGVNIAGENQTLA 377
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTN P +R+D P F T +
Sbjct: 378 SITLQNYFRMYEKLSGMTGTAETEAAEFVHTYGLEVVVIPTNKPVMRIDHPDLVFKTHKE 437
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K + +E + + G+PVLVG+ S+++SE LS+LLK + IPHNVLNA K+ A+EAE V
Sbjct: 438 KIDAIINRIEELHKKGQPVLVGTISIKSSEDLSELLKARKIPHNVLNA--KFHAQEAEIV 495
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
AQAGR +TI+TNMAGRGTDI+LGGNP+ LA
Sbjct: 496 AQAGRFGTVTIATNMAGRGTDIMLGGNPEFLA 527
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 12/162 (7%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G A Y VL+ +V C E +V GGL ++GT HESRRIDNQLRGR+GR
Sbjct: 527 AIEEVGSRDAENYNEVLEKYKVQCEEEREKVMEQGGLFILGTERHESRRIDNQLRGRSGR 586
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F D +++ R+ E PI I + + Q E
Sbjct: 587 QGDPGESEFYLSLEDDLMRLFGSDR--VKNVMERLGLPEGEPITHSMINKAIANAQNKIE 644
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVY----------DLRQSIL 652
FGIRK+L+EFD+V+ QR +Y DL++++L
Sbjct: 645 SRNFGIRKNLLEFDDVMNKQRTAIYASRNEAMVKDDLKETVL 686
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 767 DLTKNGRYRATT--NLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
DLT+ Y++T+ N K DI + Y +E+R M+ +E+ +L + +D WR
Sbjct: 728 DLTE---YKSTSIENYAEKLYNDI-VKEYDE--KENRIGSDLMRRLEKYILFEVVDSRWR 781
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
+HL +++ L + +R++G R+P+ EYK+ + ML + T L +
Sbjct: 782 EHLKSLDGLREGIYLRAYGQRDPIVEYKLLSGELYEKMLETIKEQTTSFLFK 833
>gi|19551985|ref|NP_599987.1| preprotein translocase subunit SecA [Corynebacterium glutamicum
ATCC 13032]
gi|62389647|ref|YP_225049.1| preprotein translocase subunit SecA [Corynebacterium glutamicum
ATCC 13032]
gi|81761286|sp|Q8NSB6.1|SECA1_CORGL RecName: Full=Protein translocase subunit SecA 1
gi|21323526|dbj|BAB98153.1| Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Corynebacterium glutamicum ATCC 13032]
gi|41324982|emb|CAF19463.1| PREPROTEIN TRANSLOCASE SUBUNIT SECA [Corynebacterium glutamicum
ATCC 13032]
gi|385142907|emb|CCH23946.1| translocase [Corynebacterium glutamicum K051]
Length = 845
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/428 (47%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYHVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGL VG+I M P+ERR Y DITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 MMGRVHRYLGLEVGVILSDMRPDERREAYAADITYGTNNELGFDYLRDNMARSLSDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVDGTSQFYNVFAQIVPRMTKDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 KTVGVKEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKERVEIKNENQTLATVTLQNYFRLYTKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R DL + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNQIYKLDVIAIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIAERTEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 VSVERSEYLSQLLTKRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEIL 502
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C G +V+ GGL+V+GT HESRRIDNQLRGR+ RQGDPGSTRF +S++D++ +F
Sbjct: 536 CEERGDKVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGSTRFYLSMRDDLMVRFVG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 596 PTME--NMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R+ IL A+ I +Y+Q +++E + VD Y W LDKL
Sbjct: 654 IYSERREILESAD------ISRYIQNMIEETVSAYVDGATANGYVEDWDLDKL 700
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 762 IRNIERMVLMPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|309812052|ref|ZP_07705813.1| preprotein translocase, SecA subunit [Dermacoccus sp. Ellin185]
gi|308433984|gb|EFP57855.1| preprotein translocase, SecA subunit [Dermacoccus sp. Ellin185]
Length = 907
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/449 (46%), Positives = 285/449 (63%), Gaps = 40/449 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G++AEM+T VVTVNDYLA+ +E
Sbjct: 81 RHFDVQIMGGAALHMGNVAEMRTGEGKTLVATLPSYLNAIEGKGVHVVTVNDYLAEYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR LGL G I M P +RR Y DITY N+E GFDYLRDN+A ++++LV R
Sbjct: 141 LMGRVHRALGLETGCILSSMTPAQRRDEYNKDITYGTNNEFGFDYLRDNMAWSTDELVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------- 151
+FAIVDEVDS+LIDE R PL+ISG A Y A + E L +
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGPADAATKWYVEFASIVEHLTRAEKGKDGKIT 257
Query: 152 ----YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQ 206
Y ++ K +V L E GI E L +L++ +N P ++ NA+KAKE ++RD
Sbjct: 258 KPGDYEIDEKKKTVGLLEPGIEKVEDLLGIENLYEAQNSPLIGYLNNAIKAKELFKRDKD 317
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
Y+ NG+ LI++E TGR+ RR++EG+HQA+EAKEG++IQ ++ +A +T Q+ F++Y
Sbjct: 318 YVAMNGEILIVDEHTGRMLAGRRYNEGVHQAIEAKEGVEIQNENQTLATVTLQNYFRMYD 377
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
KLSGMTGTA+TE E +++++ V+ +PTN P RVD P + + T K+ ++
Sbjct: 378 KLSGMTGTAQTEAAELYQIYKLGVVTIPTNNPPQRVDQPDRIYRTEDAKFRAVTDDIAER 437
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
R G+PVLVG+TSVE SE LS+LL+++G+ H VLNA K+ REA VAQAGRK +T++
Sbjct: 438 HRKGQPVLVGTTSVEKSERLSELLRKKGVAHEVLNA--KHHEREAAIVAQAGRKGGVTVA 495
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
TNMAGRGTDI+LGGNP+ +A ++ R L
Sbjct: 496 TNMAGRGTDIMLGGNPEFMAVAALKQRGL 524
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 14/190 (7%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD++ + F+ + V
Sbjct: 554 EVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDDLMRLFN---AALV 610
Query: 590 D-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
D +S D+D PIE + R + Q E F IRK+++++D+VL QR+ +Y R
Sbjct: 611 DRFMSGSGMDDDQPIENKIVSRSIQSAQGQVEGQNFEIRKNVLKYDDVLNRQRETIYAER 670
Query: 649 QSILTGANESCSQQIFQYMQAVVDE-IIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKI 704
+ +L G Q+ ++ +D + D +W L++L L+E I +
Sbjct: 671 KRVLEG---DIDGQMRHFINDTIDTYVATATADGFSE--HWDLERLWGALEELYPITIR- 724
Query: 705 LDDLFAGISG 714
L++L A + G
Sbjct: 725 LEELEAELGG 734
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+EVER V++ LD WR+HL M+ L +++R R+PL EY+ +G + F +M + +
Sbjct: 768 REVERRVVLTVLDRQWREHLYEMDYLKEGIHLRQMAQRDPLVEYQREGFQMFEAMTESIK 827
Query: 868 RLTVESLVQYWSSPME 883
+ + P E
Sbjct: 828 EESTQLFFHVDVDPAE 843
>gi|94267068|ref|ZP_01290708.1| SecA protein [delta proteobacterium MLMS-1]
gi|93452225|gb|EAT02879.1| SecA protein [delta proteobacterium MLMS-1]
Length = 847
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA RD+
Sbjct: 81 MRHFDVQLIGGIVLHQGKIAEMKTGEGKTVVATLAVYLNALTGRGVHVVTVNDYLASRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGLSVG++ +G+ ++R++ Y D+TY N+E GFDYLRDN+ E
Sbjct: 141 EWMGRLYNFLGLSVGVVAQGLDDQQRKAAYGADVTYGTNNEFGFDYLRDNMKFRLEDFCQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+FAIVDEVDS+L+DE R PL+ISG A Y + HYTVE K
Sbjct: 201 R---EFNFAIVDEVDSILVDEARTPLIISGPADVSTELYVKVNTLLPRFEAETHYTVEEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALI 216
+ SV LTEEG+AL E L ++L+D + MN ALKA ++RDV Y+VR+G+ +I
Sbjct: 258 SRSVALTEEGVALGEQLLGVDNLYDPRNIEQLHHMNQALKAHVLFKRDVDYLVRDGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR RR+S+G+HQA+EAKEG+K++ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRAMTGRRFSDGLHQALEAKEGVKVERENQTMASITFQNYFRMYEKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ +PT+ P +R+D P + T K+ +E++ + G+PVLVG
Sbjct: 378 TEAAEFKKIYNLDVMVIPTHHPMVRIDYPDAIYKTLDAKYRAIVREIKELHEKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S++ SE +S +LK++ IPH+VLNA K +EAE VA AG++ +TI+TNMAGRGTDI
Sbjct: 438 TISIDVSEKISAMLKKEKIPHSVLNA--KQHDQEAEIVANAGQRGKVTIATNMAGRGTDI 495
Query: 397 ILG 399
LG
Sbjct: 496 KLG 498
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 94/154 (61%), Gaps = 8/154 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 498 GEGVTDLGGLHILGTGRHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDDLLRVFGSDRIS 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + R+ +ED PIE I R + Q E + F IRK L+E+D+V+ QR+ +Y
Sbjct: 558 GV--MDRLGMEEDEPIEHKMISRAIENAQRKVEGHNFEIRKHLLEYDDVMNKQREVIYRQ 615
Query: 648 RQSILTGAN------ESCSQQIFQYMQAVVDEII 675
R+ +L+ + E + ++ Q + DE I
Sbjct: 616 RREVLSSEDLREVVMEMLADEVSALAQEIADESI 649
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 787 DILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRN 846
+ ASY +E + M+++ER +L++ +D W++HL+NM+ L + +R +G +N
Sbjct: 692 EFFTASYQE--REEQVGAANMRQLERIILLQMVDSHWKEHLLNMDHLKEGIGLRGYGQKN 749
Query: 847 PLEEYKIDGCRFFISMLSATRRLTVESL 874
PL EYK +G F +M+ R+ T+ +L
Sbjct: 750 PLIEYKREGFHMFTAMIERMRQKTISTL 777
>gi|421144606|ref|ZP_15604516.1| preprotein translocase subunit SecA [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488994|gb|EJG09839.1| preprotein translocase subunit SecA [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 880
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYAPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++ IPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRKIPHNVLNA--KYHAKEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F ++ + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFGSESVMV--WMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRKSL+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKSLLEFDDVMNKQRTTIYANRNKVLEIDN--LKDTIMEMLHKNISEKVYEKFS 703
Query: 681 PLKHPRYWSLDKL---LKEFIA 699
P + W ++ L LK+F A
Sbjct: 704 P-EMREDWDINGLNEYLKDFYA 724
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+++E+ +L +D WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 765 MRKLEKHILFDVVDNRWRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|325000906|ref|ZP_08122018.1| preprotein translocase subunit SecA [Pseudonocardia sp. P1]
Length = 857
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 282/429 (65%), Gaps = 29/429 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F VQ++G LH G+++EM T V+T NDYLA+RD+E
Sbjct: 80 RPFTVQLMGAGALHMGNVSEMGTGEGKTLTSTLAVYLNAIPGDGVHVITTNDYLAKRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+HR+LGL+VG+I M P ERR Y D+TY N+E GFDYLRDN+A N+ +V R
Sbjct: 140 TMGRIHRWLGLTVGVILAEMTPVERREQYARDVTYGTNNEFGFDYLRDNMAWNAADMVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDE DS+LIDE R PL+ISG A + Y A++A +L + +HY V+ +
Sbjct: 200 G---HNFAIVDEADSILIDEARTPLIISGPAEQSARWYQEFARLAPMLSRDIHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V +TEEG+AL E L ++L++ N P ++ NA+KAKE +++D YIV +G+ LI+
Sbjct: 257 RTVGITEEGVALIEDQLGIDNLYESANTPLVGYLNNAVKAKELFKKDKDYIVNSGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGRV RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DEFTGRVLSGRRYNEGMHQAIEAKESVEIKPENQTLATITLQNFFRLYDKLAGMTGTAQT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++++M V+ +P N P +R D + T K+E ++ G+PVL+G+
Sbjct: 377 EAAELHEIYKMSVVTIPPNKPRVRADQADLIYKTEAAKFEAVADDIAEKHHAGQPVLIGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYL+ LL ++ +PH VLNA K AREA +AQAG A+T++TNMAGRGTDI+
Sbjct: 437 TSVEKSEYLAKLLLRRSVPHEVLNA--KNHAREAAIIAQAGHAGAVTVATNMAGRGTDIM 494
Query: 398 LGGNPKMLA 406
LGGNP+ LA
Sbjct: 495 LGGNPEFLA 503
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 10/212 (4%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+VL E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 527 AVLDRMRKQVGAEAEEVRNAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 586
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
DE+ ++F+ ++ ++R +D+PIE + R + Q E+ F IRK+++++D
Sbjct: 587 DELMRRFNGQVVESI--MNRFNLPDDVPIEAKMVTRAIRSAQTQVEQQNFEIRKNVLKYD 644
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EVL QRK +YD R+ +L G E +Q ++ VV I G + W +KL
Sbjct: 645 EVLNQQRKVIYDERRRVLDG--EDVQRQTRNMLEDVVHGYITGATAE-GYSEDWDFEKLW 701
Query: 695 KEF-----IAIAGKILDDLFAGISGDTLLKSI 721
I+I + L D IS + L KS+
Sbjct: 702 TALRGLYPISIDWRTLADDVDEISAEELEKSV 733
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER VL++ +D WR+HL M+ L + +R+ R+P+ EY+ +G F +ML
Sbjct: 758 MRELERQVLMQVIDRKWREHLYEMDYLKEGIGLRAMAQRDPVIEYQREGFDMFSAMLEGI 817
Query: 867 RRLTVESL------VQYWSSPMESQE 886
+ T+ L VQ ++P++ +E
Sbjct: 818 KEETIGHLFNVVVQVQQPAAPVQEEE 843
>gi|298345531|ref|YP_003718218.1| IISP family type II (general) secretory pathway protein SecA
[Mobiluncus curtisii ATCC 43063]
gi|298235592|gb|ADI66724.1| IISP family type II (general) secretory pathway protein SecA
[Mobiluncus curtisii ATCC 43063]
Length = 941
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 284/443 (64%), Gaps = 33/443 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHF QI+GGA LH G+IAEMKT VVTVNDYLA
Sbjct: 72 LRHFREQIMGGAALHWGNIAEMKTGEGKTLVATLPCYLRALSGKGVHVVTVNDYLASYQG 131
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV+R+LGLS G+I M PEERR Y CDITY N+E GFDYLRDN+A E LV
Sbjct: 132 ELMGRVYRYLGLSTGIIMAQMDPEERRKQYNCDITYGTNNEFGFDYLRDNMAQRVEDLVQ 191
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R ++ IVDEVDS+LIDE R PL+ISG A DV Y AK+ + L G Y V+
Sbjct: 192 R---EHNYIIVDEVDSILIDEARTPLIISGPAQGDVNHWYTDFAKIVQDLHPGEDYEVDQ 248
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKA 214
K +V + E GI E L ++L++ N P F+ NA+KAKE ++ D YIV G+
Sbjct: 249 KKRTVGVLEPGIDKVEDYLGIDNLYEVANTPLIGFLNNAIKAKELFKLDKDYIVTPEGEV 308
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS--GMT 272
LI++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ +LYPK S GMT
Sbjct: 309 LIVDEHTGRVLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYVRLYPKGSRAGMT 368
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA+TE EF +++M V+ +PT+ P IR D + TA K+ +++E + G+P
Sbjct: 369 GTAETEAAEFNDVYKMGVVPIPTHKPMIREDKDDLVYKTAEAKFNAVVEDIEENYHRGQP 428
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TSVE SEYLS LL Q+ IPH VLNA K REA VA AGRK +T++TNMAGR
Sbjct: 429 VLVGTTSVEKSEYLSHLLNQRKIPHQVLNA--KQHEREAAVVAMAGRKGQVTVATNMAGR 486
Query: 393 GTDIILGGNPKMLAKKIIEDRLL 415
GTDI+LGGN + LA + ++DR L
Sbjct: 487 GTDIMLGGNAEFLAVQTLKDRGL 509
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 74/372 (19%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L++ + + E EV LGGL+V+GT HESRRIDNQLRGRAGRQGDPG +RF +S++D
Sbjct: 525 ALQEAKAKVAQEHDEVVELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGRSRFYLSMED 584
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ +F+ + W +++ R ED+P+E + + Q E IRK+++++D+
Sbjct: 585 ELM-RFA-NQGWLGNMM-RSGLPEDIPLEFKMVSGAIRSAQTQVEGRNAEIRKNVLKYDD 641
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V+ QR+ +Y R +L G + + A VD I G +
Sbjct: 642 VMTEQRETIYGERGRVLRGED----------LSATVDSFIEGTI---------------- 675
Query: 696 EFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSS 755
D + ++ +LP+++ D+ + NL+
Sbjct: 676 ------------------ADAVAQAT-DLPDVSDWDLKTLW----AGLKNLYP------- 705
Query: 756 SLKRWLAICSDDLTK--NGRYRATTNLLRKYLGDI------LIASYL--NVVQESRYDDV 805
+++ +DL G+ TT+ + + L D L A L N + +++ D
Sbjct: 706 -----VSLSVEDLENAVGGKSALTTDFITEQLVDDAKLQYELAAKSLAENPIAQAQLGDE 760
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
MKE+ER VL+ +D WR+HL M+ L + +R+ G RNPL EYK +G F +M
Sbjct: 761 PMKELERRVLLSVVDRLWREHLYEMDYLKEGIGLRAMGQRNPLVEYKTEGYLMFSAMTGR 820
Query: 866 TRRLTVESLVQY 877
+ TV+++ Y
Sbjct: 821 IKEETVQNVFGY 832
>gi|237742801|ref|ZP_04573282.1| protein translocase subunit secA [Fusobacterium sp. 4_1_13]
gi|229430449|gb|EEO40661.1| protein translocase subunit secA [Fusobacterium sp. 4_1_13]
Length = 880
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYAPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++ IPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRKIPHNVLNA--KYHAKEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F ++ + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFGSESVMV--WMDRLKLPEGEPITHKWINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRKSL+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 646 ARNFGIRKSLLEFDDVMNKQRTTIYANRNKVLEIDN--LKDTIMEMLHKNISEKVYEKFS 703
Query: 681 PLKHPRYWSLDKL---LKEFIA 699
P + W ++ L LK+F A
Sbjct: 704 P-EMREDWDINGLNEYLKDFYA 724
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+++E+ +L +D WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 765 MRKLEKHILFDVVDNRWRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|304439804|ref|ZP_07399701.1| preprotein translocase subunit SecA [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371710|gb|EFM25319.1| preprotein translocase subunit SecA [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 934
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 295/482 (61%), Gaps = 53/482 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQIIGG +LH G IAEM+T VVTVNDYLA RD
Sbjct: 101 MKHFPVQIIGGIILHQGRIAEMRTGEGKTLVATLPAYLNAISEKGVHVVTVNDYLASRDK 160
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +V+ FLGLSVG I G+ PEER+ Y DITY N+E GFDYLRDN+ E++V
Sbjct: 161 LWMGKVYEFLGLSVGCIIHGLSPEERKIAYNADITYGTNNEFGFDYLRDNMVIYKEEMVQ 220
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R P ++ IVDEVDS+LIDE R PL+ISG + Y A L
Sbjct: 221 R---PLNYCIVDEVDSILIDEARTPLIISGRGDESTDLYVKARDFVNTLSHRVKTEEESS 277
Query: 148 ----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALK 196
+ + Y V K+ + LT++GI+ AE ++L D +N + ALK
Sbjct: 278 FERFNRTFEEETVDYVVNEKDKTSTLTDKGISKAEKYFGVDNLTDLDNMELQHHINQALK 337
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A+ ++D+ Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEGL +QA+S +A I
Sbjct: 338 AQGNMKKDIDYVVKDGEIIIVDEFTGRLMFGRRYSEGLHQAIEAKEGLNVQAESKTLATI 397
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KL+GMTGTA TEE EF ++ + V+E+PTN P IRVD + + K+
Sbjct: 398 TFQNYFRMYRKLAGMTGTAMTEEGEFRDIYHIDVVEIPTNKPVIRVDANDSIYKSEDAKF 457
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+ +E+E G+PVLVG+ S+E SE LS LK+ GI HNVLNA K +E+E VAQ
Sbjct: 458 KAVTREIEECHAKGQPVLVGTISIEKSEELSKYLKRAGIKHNVLNA--KNHEQESEIVAQ 515
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALN-VEVDDKTSSPK 435
AGR A+TI+TNMAGRGTDI+LGGNP+ +AK ++ L E LN V+ ++T + +
Sbjct: 516 AGRFGAVTIATNMAGRGTDIVLGGNPEFMAKNQMKKE---GLEEEILNQVDTYNETDNAE 572
Query: 436 VL 437
VL
Sbjct: 573 VL 574
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 171/367 (46%), Gaps = 67/367 (18%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y ++K + E EVK GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 580 YQELVKKYKEETDKEAEEVKAAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYIS 639
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
D++ + F+ D + + RI ED PIE + + + Q E F IRK++++
Sbjct: 640 ADDDLIRLFAGDRFK--NTMERIDAPEDEPIESKLLTKLIESAQRKVEGNNFSIRKNVLQ 697
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G + I ++A++D II N+ +++
Sbjct: 698 YDDVMNKQREVIYKERRKVLEG------EDIHADIEAMIDSIIEKNI------QFY---- 741
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
N +D NN ++ D+ N I
Sbjct: 742 -----------------------------------NKMDHNNKHYLDMEGIVNFVTNI-- 764
Query: 753 KSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVER 812
K +L +G + L Y+ D+ Y +E+ + +E+ER
Sbjct: 765 -FGFEKNFL---------DGYNGNSVEDLIAYVEDLAAKKYTE--KEAEFTPDKFREIER 812
Query: 813 AVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVE 872
VL++ +D W DH+ M++L + + +R+ G +P+ Y +G F M + + TV+
Sbjct: 813 VVLLQVVDQKWMDHIDAMDQLRTGIGLRAVGQVDPVRAYAQEGFDMFEEMNESIKEDTVK 872
Query: 873 SLVQYWS 879
L ++
Sbjct: 873 MLFHIYN 879
>gi|429728440|ref|ZP_19263163.1| preprotein translocase, SecA subunit [Peptostreptococcus anaerobius
VPI 4330]
gi|429149669|gb|EKX92640.1| preprotein translocase, SecA subunit [Peptostreptococcus anaerobius
VPI 4330]
Length = 894
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/430 (47%), Positives = 275/430 (63%), Gaps = 30/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MRHFRVQLIGGMVLHQGRIAEMKTGEGKTLVATCPVYLNALEGKGVHVVTVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +V+ FLGLSVG+I G P+ R+ Y CDITY N+E GFDYL+DN+ + EQ+V
Sbjct: 139 DQMAKVYEFLGLSVGVIVHGQNPQVRKKQYECDITYGTNNEYGFDYLKDNMVIHEEQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++AIVDEVDS+L+DE R PL+ISG K Y A V + + Y E K
Sbjct: 199 RG---LNYAIVDEVDSILVDEARTPLIISGPGDKSTHLYS-DANVFIMTLDEDDYEKEEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTE GI AE+ ++ E+ + ALKA ++DV Y+ ++ + +I
Sbjct: 255 DKAVSLTESGIKKAEVYFNVENITTLEHTELYHHINQALKAHVIMKKDVDYVAKDDEIII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGL IQ +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 315 VDEFTGRLMFGRRYSDGLHQAIEAKEGLTIQRESKTLATITFQNYFRMYSKLSGMTGTAK 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++M V +VPTN P IR DL +A K+ +++E +PVLVG
Sbjct: 375 TEEEEFKSIYKMDVFQVPTNKPTIREDLADSVYANQMAKFHAVARDIEERHAKNQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS++L ++GI H VLNA KY +EAE +AQAGR A+TI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSEILTERGIAHEVLNA--KYHEKEAEIIAQAGRLGAVTIATNMAGRGTDI 492
Query: 397 ILGGNPKMLA 406
+LGG P +A
Sbjct: 493 LLGGAPAFMA 502
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 512 TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 571
TY + +D + E EV + GGL +IGT HESRRIDNQLRGRAGRQGDPG++RF +
Sbjct: 540 TYKKLYEDFKKITDKEQEEVIKAGGLCIIGTERHESRRIDNQLRGRAGRQGDPGASRFYI 599
Query: 572 SLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 631
L D++ + F + L+ ++ D++ PIE + + + Q E FGIRK ++
Sbjct: 600 GLDDDLMRLFGSEKVQG--LLGKLGMDDETPIEHRMLTKSIENAQKKVEGKNFGIRKHVL 657
Query: 632 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
E+D+V+ QR+ +Y R+ +L+G E+ QI M+ V+
Sbjct: 658 EYDDVMNKQREIIYTERKRVLSG--ENLQDQIQDMMKDVI 695
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+EVER +L++++D W DH+ M++L + +R+ G +P+ YK++G F M
Sbjct: 765 MREVERIILLQSVDNHWIDHIDAMDQLRQGIGLRAIGQIDPVIAYKMEGFEMFDDMNKLI 824
Query: 867 RRLTVESL 874
R TV L
Sbjct: 825 REDTVAYL 832
>gi|384411312|ref|YP_005620677.1| Preprotein translocase subunit SecA [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931686|gb|AEH62226.1| preprotein translocase, SecA subunit [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 925
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 278/430 (64%), Gaps = 36/430 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQIIGG VLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQIIGGIVLHRGEIAEMRTGEGKTLVATLACYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +V+RFLGL+VG++ + EERR Y DITY N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 QMGQVYRFLGLTVGVVMPNISDEERRQAYLADITYATNNELGFDYLRDNMKYTREQMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AI+DEVDS+LIDE R PL+ISG Y +V + L Y ++ K
Sbjct: 202 ---PFNYAIIDEVDSILIDEARTPLIISGPTDDKSDLYIAIDQVVKKLGSD-DYEIDEKQ 257
Query: 159 NSVELTEEGIALAEMALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTE+G AE L+ + +L+D EN + AL+A +RRDV Y+VRN
Sbjct: 258 KNVVLTEDGTERAEQFLKADGLLPEGNLYDFENTQIVHHLNQALRANLMFRRDVDYLVRN 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
K +II+E TGR+ + RRWSEG+HQA+EAKEG++I+ ++ +A IT+Q+ F+LYP+++GM
Sbjct: 318 NKVVIIDEFTGRMMDGRRWSEGLHQAIEAKEGVQIEPENQTLASITFQNYFRLYPRIAGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF +++++ V+ +PTNLP R D Q + K+ + ++ G+
Sbjct: 378 TGTAATEATEFHQIYKINVVTIPTNLPVQRKDENDQFYKNLEDKFRAIAKSIKEHAASGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+ S+E SE LS+ L+ +G+PH VLNAR Y EA VAQAGR A+TI+TNMAG
Sbjct: 438 PILVGTVSIEKSELLSEYLRHEGVPHKVLNAR--YHEMEAHIVAQAGRLGAVTIATNMAG 495
Query: 392 RGTDIILGGN 401
RGTDI LGGN
Sbjct: 496 RGTDIQLGGN 505
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E V GGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F
Sbjct: 534 VAEEKQRVLEAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLLRIFGS 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA-----EKYYFGIRKSLVEFDEVLE 638
T +A + + + G+AIV ++ I E + IRK +VE+D+V+
Sbjct: 594 QTMFAKMMNKSLAD-------GEAIVSPIMSKAIETAQRKVEARNYDIRKQVVEYDDVMN 646
Query: 639 VQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
QRK +Y+ R +++ ES + + + + + +++ ++ W +D+L
Sbjct: 647 DQRKVIYEQRATVMDA--ESVNDLVEEMREDTIADLVSETCPEDQYVEQWDIDQL 699
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+++ L++ +D W++HL ++ L +++R++ + P+ EYK + F ML + R
Sbjct: 754 IQKNTLLQAIDHHWKEHLSVLDSLRQIIHLRAYAQQTPINEYKHEAFALFERMLISIRED 813
Query: 870 TVESL--VQYWSSPMESQEL 887
+L ++ + E EL
Sbjct: 814 VTRNLSRIELFQPSFELSEL 833
>gi|218887957|ref|YP_002437278.1| preprotein translocase subunit SecA [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|226732190|sp|B8DRH3.1|SECA_DESVM RecName: Full=Protein translocase subunit SecA
gi|218758911|gb|ACL09810.1| preprotein translocase, SecA subunit [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 844
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/424 (48%), Positives = 277/424 (65%), Gaps = 30/424 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLVGGMVLHEGRIAEMKTGEGKTLVATLPVVLNAISGLGVHVVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGLSVG+I G+ EER+ Y DITY N+E GFDYLRDN+ QLV
Sbjct: 141 AWMGRLYNFLGLSVGVIVHGLSDEERKEAYGADITYGTNNEFGFDYLRDNMKFYPHQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG + Y + L H++V+ K
Sbjct: 201 R---EHNFAIVDEVDSILIDEARTPLIISGPSEDSTGLYRRVDDIIPKLSPEAHFSVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVR-NGKAL 215
+ LT+EG+A E L ++L+D N + V+ ALKA +RRDV YIV + +
Sbjct: 258 ARTATLTDEGVAKCEELLGIDNLFDPGNITFQHHVLQALKAHHVFRRDVDYIVTPEDQVV 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR+S+G+HQA+EAKE +K++A++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 IVDEFTGRLMPGRRFSDGLHQALEAKEKVKVEAENQTLASITFQNYFRMYKKLAGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE EF +++ + VI +PTN P +R D P + T R K+E + + + G+PVLV
Sbjct: 378 DTEAVEFQQIYGLQVITIPTNKPMVRKDYPDSIYRTRREKFEAIVAAIGELHKSGQPVLV 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE LS +LK+ G+PHNVLNA K+ +EAE VAQAG++ +TI+TNMAGRGTD
Sbjct: 438 GTISIETSELLSAMLKKTGVPHNVLNA--KHHEQEAEIVAQAGQRGKVTIATNMAGRGTD 495
Query: 396 IILG 399
I+LG
Sbjct: 496 IVLG 499
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 76/342 (22%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ GGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 499 GEGVRESGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRLFGSDRIS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ +E PIE + R + Q E + F IRK+L+++D V+ QR+ +Y L
Sbjct: 559 G--LMQKLGMEEGEPIENRMVSRAIENAQKRVEGHNFEIRKTLLDYDNVMNQQREVIYTL 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ + M+A ++E A + +DD
Sbjct: 617 RRETM--------------MEADLEET--------------------------AVEFMDD 636
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
LF I GD E+ D + L R ++ R L +
Sbjct: 637 LFDEIYGDA-----EQGKGSEGDDAKAYAMARL-----------RDVFNITRVLPLTDGQ 680
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYD--DVYMKEVERAVLVKTLDCFWRD 825
L R + L+++ E + D +VY +++ R L++ +D W++
Sbjct: 681 LPDRETARG---------------AVLSILDELKRDTGEVY-RDILRFFLLEEVDRCWKE 724
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
HL+NM+ L + +R +G R+P +EYK +G F ML R
Sbjct: 725 HLLNMDHLRDGIGLRGYGQRDPKQEYKREGFSLFQEMLFRVR 766
>gi|260752616|ref|YP_003225509.1| preprotein translocase subunit SecA [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|258551979|gb|ACV74925.1| preprotein translocase, SecA subunit [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 925
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 278/430 (64%), Gaps = 36/430 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQIIGG VLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQIIGGIVLHRGEIAEMRTGEGKTLVATLACYLNALEGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +V+RFLGL+VG++ + EERR Y DITY N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 QMGQVYRFLGLTVGVVMPNISDEERRQAYLADITYATNNELGFDYLRDNMKYTREQMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AI+DEVDS+LIDE R PL+ISG Y +V + L Y ++ K
Sbjct: 202 ---PFNYAIIDEVDSILIDEARTPLIISGPTDDKSDLYIAIDQVVKKLGSD-DYEIDEKQ 257
Query: 159 NSVELTEEGIALAEMALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTE+G AE L+ + +L+D EN + AL+A +RRDV Y+VRN
Sbjct: 258 KNVVLTEDGTERAEQFLKADGLLPEGNLYDFENTQIVHHLNQALRANLMFRRDVDYLVRN 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
K +II+E TGR+ + RRWSEG+HQA+EAKEG++I+ ++ +A IT+Q+ F+LYP+++GM
Sbjct: 318 NKVVIIDEFTGRMMDGRRWSEGLHQAIEAKEGVQIEPENQTLASITFQNYFRLYPRIAGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF +++++ V+ +PTNLP R D Q + K+ + ++ G+
Sbjct: 378 TGTAATEATEFHQIYKINVVTIPTNLPVQRKDENDQFYKNLEDKFRAIAKSIKEHAASGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
P+LVG+ S+E SE LS+ L+ +G+PH VLNAR Y EA VAQAGR A+TI+TNMAG
Sbjct: 438 PILVGTVSIEKSELLSEYLRHEGVPHKVLNAR--YHEMEAHIVAQAGRLGAVTIATNMAG 495
Query: 392 RGTDIILGGN 401
RGTDI LGGN
Sbjct: 496 RGTDIQLGGN 505
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E +V GGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F
Sbjct: 534 VAEEKQKVLEAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLLRIFGS 593
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISA-----EKYYFGIRKSLVEFDEVLE 638
T +A + + + G+AIV ++ I E + IRK +VE+D+V+
Sbjct: 594 QTMFAKMMNKSLAD-------GEAIVSPIMSKAIETAQRKVEARNYDIRKQVVEYDDVMN 646
Query: 639 VQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
QRK +Y+ R +++ ES + + + + + +++ ++ W +D+L
Sbjct: 647 DQRKVIYEQRATVMDA--ESVNDLVEEMREDTIADLVSETCPEDQYVEQWDIDQL 699
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+++ L++ +D W++HL ++ L +++R++ + P+ EYK + F ML + R
Sbjct: 754 IQKNTLLQAIDHHWKEHLSVLDSLRQIIHLRAYAQQTPINEYKHEAFALFERMLISIRED 813
Query: 870 TVESL--VQYWSSPMESQEL 887
+L ++ + E EL
Sbjct: 814 VTRNLSRIELFQPSFELSEL 833
>gi|375310905|ref|ZP_09776169.1| protein translocase subunit seca [Paenibacillus sp. Aloe-11]
gi|375077103|gb|EHS55347.1| protein translocase subunit seca [Paenibacillus sp. Aloe-11]
Length = 816
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/434 (46%), Positives = 284/434 (65%), Gaps = 30/434 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 81 RHYDVQMLGGIALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSG 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VGL M ++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYNFLGMTVGLNLANMDHAAKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YT+++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKSLNVEEDYTLDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G++ AE +L+D E+ ++ ALKA R DV Y+V +G+ LI+
Sbjct: 258 KSVALTENGVSKAENFFGLENLYDQESVTINHHIVQALKANAIMRLDVDYVVADGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE + +Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKENIIVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN RVD+P + + +GK+ E+ + +PVLVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNRPNQRVDMPDVVYKSVKGKFHAVVDEILERNKKNQPVLVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE ++ AG A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSELLSEMLKRKGVRHKVLNA--KYHAEEAEIISHAGEAGAVTIATNMAGRGTDIV 495
Query: 398 LG-GNPKMLAKKII 410
LG G P++ II
Sbjct: 496 LGEGVPELGGLHII 509
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 166/340 (48%), Gaps = 72/340 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVPELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F RK ++++D+V+ QR +Y
Sbjct: 555 VLNMMERLGFEEDQPIESRMITRAIESAQKRVEGNNFDQRKVVLQYDDVMNQQRAIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L N + EI+F + P +++
Sbjct: 615 RREVLESEN--------------IKEIVFDMIKP----------------------VIER 638
Query: 708 LFAGISGDTLLKS--IEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
+ GD + ++ +EE+ E +NN NL + ++L R
Sbjct: 639 VVEAHCGDDIPENWELEEVAEY----VNN----------NLL-----EENTLTR------ 673
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
DDL R + K + A Y + +E + ++E E+ ++++ +D W D
Sbjct: 674 DDLWGKEREEMVEMIFEK-----VTARYHS--REEMIGEEMVREFEKVIVLRAVDSKWMD 726
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
H+ M++L +++R++G +PL EY+ +G F +M+ +
Sbjct: 727 HIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHAMIGS 766
>gi|227505517|ref|ZP_03935566.1| preprotein translocase subunit SecA [Corynebacterium striatum ATCC
6940]
gi|227197881|gb|EEI77929.1| preprotein translocase subunit SecA [Corynebacterium striatum ATCC
6940]
Length = 833
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/467 (43%), Positives = 297/467 (63%), Gaps = 34/467 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 59 KHYKVQIMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALEGKGVHIVTVNDYLAKRDAE 118
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LGLSVG+I M P ER+ Y CDITY N+ELGFDYLRDN+ + +V R
Sbjct: 119 MMGRVHRWLGLSVGVILSEMRPAERKEAYACDITYGTNNELGFDYLRDNMVRALDDVVQR 178
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++ IVDEVDS+LIDE R PL+ISG Y V A++A + +G+HY V+ K
Sbjct: 179 G---HNYCIVDEVDSILIDEARTPLIISGPVDGSSQFYSVFAQLAPKMREGIHYEVDHKK 235
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ + EEG+ E L ++L+ E+ ++ NALKA+E + RD YIVRNG+ +I+
Sbjct: 236 RTIGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNALKAEELFTRDKDYIVRNGEVMIV 295
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 296 DSFTGRVLAGRRYNEGMHQAIEAKENVEIKNENQTLATVTLQNYFRLYEKISGMTGTAET 355
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++ + V+ +PTN PN R D + + T K+ ++ G+PVLVG+
Sbjct: 356 EAAELHSIYGLDVVPIPTNKPNQRADHSDRIYKTQEAKFAAVVDDIAEHVAAGQPVLVGT 415
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ H+VLNA K+ E + VA+AGR +T++TNMAGRGTDI+
Sbjct: 416 TSVERSEYLSQLLTKRGVKHSVLNA--KHHEEEGQIVARAGRPGTVTVATNMAGRGTDIV 473
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEVDDKTSSPKVLSE 439
LGGNP+++ + + +R L +EA + E++++ K L +
Sbjct: 474 LGGNPEVILDEKLRERGLDPFEDEERYQEAWDAEIEEEKERSKRLGD 520
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 14/215 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV+ GGL+V+GT HESRRIDNQLRGR GRQGDPG TRF +S++DE+ +F +
Sbjct: 519 GDEVREAGGLYVLGTERHESRRIDNQLRGRTGRQGDPGETRFYLSMRDELMVRFVGQS-- 576
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 577 MENMMNRLNVPDDVPIEAKMVSNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYAT 636
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAGKI 704
R IL + I ++ ++D+ + V Y W+LD+L ++ G
Sbjct: 637 RHDILDAGD------IKDNIRDMIDDTVSAYVAGATATGYVEDWNLDELWNALESLYGPT 690
Query: 705 L--DDLFAGIS-GDTLLKSIEELPELNSIDINNFY 736
+ + L G G + E+L E D N+ Y
Sbjct: 691 MSHESLVEGTEYGSAGELTAEQLREALVADANSEY 725
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G F +M
Sbjct: 741 MRSTERMVILPIIDQKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMNEGV 800
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 801 KEETVRQL 808
>gi|383788716|ref|YP_005473285.1| protein translocase subunit SecA [Caldisericum exile AZM16c01]
gi|381364353|dbj|BAL81182.1| protein translocase subunit SecA [Caldisericum exile AZM16c01]
Length = 809
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/439 (46%), Positives = 285/439 (64%), Gaps = 45/439 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GG VL G IAEMKT +VTVNDYLA+RDA
Sbjct: 76 MRHFDVQILGGLVLFYGGIAEMKTGEGKTLVATLPLYLNALEGHGGHLVTVNDYLAKRDA 135
Query: 38 EWMERVHRFLGLSVGLIQR----------------GMIPEERRSNYRCDITYTNNSELGF 81
WM +++FLGL+VG+IQ ++P R+ Y D+TY N+E GF
Sbjct: 136 LWMGPIYKFLGLTVGVIQHEEAFLVDWDDKEKFTVKLVPCTRKVAYLADVTYGTNNEFGF 195
Query: 82 DYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK 141
DYLRD+L + E +V R ++AIVDEVDS+LIDE R PL+ISG A + Y VA K
Sbjct: 196 DYLRDHLVVSPEDMVQR---ELYYAIVDEVDSILIDEARTPLIISGPAEESTEMYYVAKK 252
Query: 142 VAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEN-DPWARFVMNALKAKEF 200
VA+ L++ + Y + K + LT++G+ E L ++L+DE + + AL+AKEF
Sbjct: 253 VADNLIRDVDYETDEKLKTTSLTQDGVKKIEKLLHIDNLYDERFVDLVKHINQALRAKEF 312
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+ RDV YIV++G+ +I++E TGR+ RR+S+G+HQA+EAKEGL++Q+++ +A IT+Q+
Sbjct: 313 FHRDVDYIVKDGEVIIVDEFTGRLMFGRRYSDGLHQAIEAKEGLRVQSENQTLATITFQN 372
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA TE +EF +++ + V +PTN P IRVD P + T K+
Sbjct: 373 YFRMYKKLAGMTGTALTEAREFKEIYNLDVYVIPTNKPVIRVDHPDVVYKTEDAKFRAIV 432
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
+++E +++ G+PVLVG+ S+E SE LS +LK+ GIPHNVLNA KY +EAE + AG+
Sbjct: 433 RKIEELYKKGQPVLVGTRSIEKSERLSKMLKRLGIPHNVLNA--KYHEKEAEIIKDAGQY 490
Query: 381 YAITISTNMAGRGTDIILG 399
A+TI+TNMAGRG DI LG
Sbjct: 491 KAVTIATNMAGRGVDIKLG 509
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 8/199 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL V+GT HE+RRIDNQLRGR+GRQGDPG ++F +SL+DE+ + F D
Sbjct: 509 GEGVAELGGLFVLGTERHEARRIDNQLRGRSGRQGDPGESQFYLSLEDELMRLFGGDQVK 568
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ + DED PIE + R + Q E Y F IRK+L+++D VLE QR+ +Y
Sbjct: 569 SI--LTTLKVDEDEPIEHPLLSRIIENAQKKVEAYNFSIRKNLLDYDNVLEKQREVIYKE 626
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV--DPLKHPRYWSLDKLLKEFIAIAGKIL 705
R+ IL S +I ++ V+ + + + L R L+K L + K+
Sbjct: 627 REKIL--KEPSIRDEIVDMIKEVIASTVSAHFVEEDLDEERKTELEKALSNLMGRNIKLG 684
Query: 706 DDLFAGISGDTLLKSIEEL 724
+ + D L++ IE+L
Sbjct: 685 E--LTNVKKDELIEQIEDL 701
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VE+ +L++ +D W+DHL M+ L + +R++G ++PL EY+I+ F +ML
Sbjct: 718 MRSVEKYLLLRNIDSNWKDHLYAMDELKEGIGLRAYGQKDPLLEYQIESRSLFDAMLDRI 777
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ TV L + +P E ++
Sbjct: 778 KYDTVFMLYRVELAPKEEEK 797
>gi|339445468|ref|YP_004711472.1| preprotein translocase subunit SecA [Eggerthella sp. YY7918]
gi|338905220|dbj|BAK45071.1| preprotein translocase subunit SecA [Eggerthella sp. YY7918]
Length = 936
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/434 (45%), Positives = 278/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG L+DG IAEMKT +VTVNDYLA+RD+
Sbjct: 80 LRHFDVQLIGGMALNDGQIAEMKTGEGKTLVSTLAGYLNAVTGNNVHIVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++RFLG+ VGLIQ GM P+++ Y+ D+TY NSE GFDYLRDN+ ++ V
Sbjct: 140 EWMGQIYRFLGMEVGLIQNGMQPDKKIPAYKADVTYGTNSEFGFDYLRDNMVTRADSRVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFAIVDEVDS+LIDE R PL+ISG ++ Y A+V L G+ + ++
Sbjct: 200 RG---HHFAIVDEVDSILIDEARTPLIISGAGTQAAETYNKFARVMPGLKPGVDFDMDEA 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ TE G+ E L +D++ D + A + ALKA+ + RD+ Y+V G+ I
Sbjct: 257 KKTINATESGLEKIEAMLGIDDIYADPSGQLANHLQQALKAQFLFHRDIDYVVTGGEVKI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RRWSEG+HQAVEAKE + ++ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 VDEFTGRIMEGRRWSEGLHQAVEAKEHVLVREENQTLATITLQNYFRLYEKLSGMTGTAM 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE+ EF +++++PV+ +P+N P +R D + T K+ +V G+P L+G
Sbjct: 377 TEDAEFRQIYKLPVVAIPSNKPVVRKDEDDLIYRTIEAKFNAVADDVAERNAHGQPCLIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LS LL ++GI H LNA K REA +AQAGR A+TI+TNMAGRGTDI
Sbjct: 437 TVSIESSEKLSRLLDKRGIAHETLNA--KNHEREAHIIAQAGRVGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKII 410
+LGGNP ++A ++
Sbjct: 495 LLGGNPDVMADDVL 508
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 10/166 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C++E V GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +SL+D++ + F
Sbjct: 547 CADEHDRVIAAGGLTVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSLEDDLMRLFGG 606
Query: 584 DTSWAVDLISRITND----EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEV 639
+ +D I+R+ EDMPI+ + + + G Q E +F RK+++E+D+V+ +
Sbjct: 607 NR---MDSIARMMEKTDMPEDMPIQAGMVSKAIEGAQRQVESMHFAARKNVLEYDDVMNL 663
Query: 640 QRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
QR +Y R +IL G N ++I + ++ ++ N P K P
Sbjct: 664 QRAAIYGERNAILDGKN--MDERIPEIIRDAASAVVAENC-PAKSP 706
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +E V+++ +D W HL M+ L + + +R+FG R+PL EYK + F S+ +
Sbjct: 766 MRMLESQVMLRIIDTRWMAHLQEMDYLKAGIGLRAFGQRDPLVEYKNEAYNAFQSLTAGM 825
Query: 867 RRLTVESLVQYWSSPMESQEL 887
+ +L++ + + EL
Sbjct: 826 YEDYLRTLLRLQVAVQQQPEL 846
>gi|238019425|ref|ZP_04599851.1| hypothetical protein VEIDISOL_01294 [Veillonella dispar ATCC 17748]
gi|237864124|gb|EEP65414.1| hypothetical protein VEIDISOL_01294 [Veillonella dispar ATCC 17748]
Length = 819
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/429 (46%), Positives = 277/429 (64%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G+IAEM+T VVTVNDYLA RD+
Sbjct: 88 MRHFDVQLIGGICLHRGNIAEMRTGEGKTLVATLPVYLNALTGNGVHVVTVNDYLATRDS 147
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGLS GLI + +R+ Y CDITY N+E GFDYLRDN+ ++ Q+V
Sbjct: 148 EQMGRLYNFLGLSTGLIVANLDYNQRKEAYACDITYGTNNEFGFDYLRDNMVSDVSQMVQ 207
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG + Y AK+ LV+ YT++ K
Sbjct: 208 R---PLNYAIVDEVDSILIDEARTPLIISGPGQRSTDNYYKLAKIVPHLVKDEDYTIDEK 264
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ T+ GIA E L +L+D EN + +L+A RD Y+V++G+ +I
Sbjct: 265 QKTIAPTDSGIAKVEKMLGVENLYDAENIELNHLLGASLRAYAMMHRDTDYVVKDGEVVI 324
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK++ +S +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 325 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASITFQNYFRMYKKLAGMTGTAK 384
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEEKEF+ ++ + V+ +P N P RVDLP Q F T K+ + + G+P+L+G
Sbjct: 385 TEEKEFIDIYGLEVLPIPPNKPLARVDLPDQIFKTKAAKYRAVVRNAVERHQTGQPILIG 444
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LSD+L + G+PH VLNA K+ +EAE VA AG+ +TI+TNMAGRGTDI
Sbjct: 445 TTSITQSEELSDMLLRAGVPHKVLNA--KHHEKEAEIVANAGQMGMVTIATNMAGRGTDI 502
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 503 TLGEGVPEL 511
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 160/347 (46%), Gaps = 67/347 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 505 GEGVPELGGLAILGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRIFGADNIT 564
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I + + Q E + + IRK ++E+D+V+ QR+ +Y+
Sbjct: 565 GI--MDKLGMEEDEPIEHSLITKSIERAQKKVEDHNYNIRKYVLEYDDVMNQQREVLYEQ 622
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL NES I + + +V E + D +P W + L K
Sbjct: 623 RRRILR--NESLRDTINEMIDKLVTESVDAYADEKLYPEEWDYEGLYKHLSQY------- 673
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F D+ P ++ R++ L+R L I
Sbjct: 674 ---------------------------FLTEDIMTPQDMEEYSRQE--LLERLLEIA--- 701
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
+ Y+ ++ LGD + + D+ +M+ ++
Sbjct: 702 ---HAEYQDRVDM----LGDAMFGQLEKAIMLRVVDNKWMEHLD---------------- 738
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
NM+ L + +R++G +NPL EYK + F +M++A + T+ +L
Sbjct: 739 -NMDMLREGIGLRAYGQKNPLVEYKFEAFDMFQNMIAAIQDETIMAL 784
>gi|256846125|ref|ZP_05551583.1| preprotein translocase, SecA subunit [Fusobacterium sp. 3_1_36A2]
gi|256719684|gb|EEU33239.1| preprotein translocase, SecA subunit [Fusobacterium sp. 3_1_36A2]
Length = 891
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 92 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 151
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 152 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 211
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 212 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 268
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 269 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYAPEYVELTHFLNQA 328
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 329 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 388
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 389 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 448
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++ IPHNVLNA KY A+EAE
Sbjct: 449 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRKIPHNVLNA--KYHAKEAEI 506
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 507 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 539
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + VL + C E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 539 ALAEVGSRDDERFPEVLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGR 598
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F ++ + R+ E PI I + Q E
Sbjct: 599 QGDPGESEFYLSLEDDLMRLFGSESVMV--WMDRLKLPEGEPITHKWINSAIEKAQKKIE 656
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRKSL+EFD+V+ QR +Y R +L N I + + + E ++
Sbjct: 657 ARNFGIRKSLLEFDDVMNKQRTTIYANRNKVLEIDN--LKDTIMEMLHKNISEKVYEKFS 714
Query: 681 PLKHPRYWSLDKL---LKEFIA 699
P + W ++ L LK+F A
Sbjct: 715 P-EMREDWDINGLNEYLKDFYA 735
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+++E+ +L +D WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 776 MRKLEKHILFDVVDNRWRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 834
>gi|294784745|ref|ZP_06750033.1| preprotein translocase, SecA subunit [Fusobacterium sp. 3_1_27]
gi|294486459|gb|EFG33821.1| preprotein translocase, SecA subunit [Fusobacterium sp. 3_1_27]
Length = 880
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 288/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ E+R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTEQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEQILKIDNLYAPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++ IPHNVLNA KY A+EAE
Sbjct: 438 EKINAIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRKIPHNVLNA--KYHAKEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 8/187 (4%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL + C E +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D
Sbjct: 543 VLAKYQEQCKEEKEKVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLED 602
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F ++ + R+ E PI I + Q E FGIRKSL+EFD+
Sbjct: 603 DLMRLFGSESVMV--WMDRLKLPEGEPITHKWINSAIEKAQKKIEARNFGIRKSLLEFDD 660
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL-- 693
V+ QR +Y R +L N I + + + E ++ P + W ++ L
Sbjct: 661 VMNKQRTTIYANRNKVLEIDN--LKDTIMEMLHKNISEKVYEKFAP-EMREDWDINGLNE 717
Query: 694 -LKEFIA 699
LK+F A
Sbjct: 718 YLKDFYA 724
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+++E+ +L +D WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 765 MRKLEKHILFDVVDNRWRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|433461520|ref|ZP_20419129.1| preprotein translocase subunit SecA [Halobacillus sp. BAB-2008]
gi|432190020|gb|ELK47071.1| preprotein translocase subunit SecA [Halobacillus sp. BAB-2008]
Length = 837
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 274/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQ++G LH+G+IAEMKT ++TVNDYLA RDA
Sbjct: 80 MRPFKVQLLGALALHEGNIAEMKTGEGKTLASTMPAYLNAITGKGVHIITVNDYLASRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M + +FLGL+VGL GM EE+R Y DITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 KEMGELFQFLGLTVGLNLNGMSKEEKRDAYLADITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AI+DEVDS+LIDE R PL+ISG ASK Y A LL + +T + K
Sbjct: 200 R---PLHYAIIDEVDSILIDEARTPLIISGSASKSADLYQSANSFVRLLEKEEDFTYDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +LTEEGI AE + +L+D N + ALKA RD Y++ +G+ +I
Sbjct: 257 TKNAQLTEEGINKAERFFKIENLFDLSNVSLIHHINQALKAHSSMHRDTDYVIEDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+S+G+HQA+EAKEGL+IQ +S +A IT+Q+LF++Y KLSGMTGTAK
Sbjct: 317 VDQFTGRLMKGRRYSDGLHQAIEAKEGLEIQNESQTLASITFQNLFRMYEKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EFL ++ M VI +PTN R D P + T GK++ ++++ + LG+PVLVG
Sbjct: 377 TEEEEFLNIYNMRVIVIPTNRDIARDDKPDLVYKTMDGKFKAVVEDIKQRYDLGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S L + G+PHNVLNA+ + REAE + AG+K A+TI+TNMAGRGTDI
Sbjct: 437 TVAVETSEIISRYLNKAGVPHNVLNAKNHF--REAEIIENAGQKGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 KLG 497
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F ++ DE+ ++F+ D
Sbjct: 497 GEGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGMSQFYLATDDELMRRFASDNIR 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PIE I R + Q E F RK+++ +D+VL QR+ +Y
Sbjct: 557 S--MMDRLGMDDSQPIESKMISRAVESAQKRVEGNNFDARKTVLSYDDVLRQQREVIYKQ 614
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVD 672
R +LT N E Q I + + VD
Sbjct: 615 RYEVLTSENLREIIEQMIERVVSQTVD 641
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M+E E+ +L++++D W DH+ M++L +++R++G +PL EY +G R F M++
Sbjct: 708 MREFEKVILLRSVDQKWMDHIDQMDQLRQGIHLRAYGQNDPLREYNFEGFRMFEQMIA 765
>gi|161347548|ref|YP_461626.2| preprotein translocase subunit SecA [Syntrophus aciditrophicus SB]
gi|166919158|sp|Q2LTP4.2|SECA_SYNAS RecName: Full=Protein translocase subunit SecA
Length = 841
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ+IGG VLH+G IAEMKT +VTVNDYLA RDA
Sbjct: 81 MRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNALEGKGAHLVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I GM +ERR+ Y CDITY N+E GFDYLRDN+ + E
Sbjct: 141 EWMSPIYSFLGLSVGVIVHGMDDDERRAAYACDITYGTNNEFGFDYLRDNMKYSLEDYTQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+++IVDEVDS+LIDE R PL+ISG + + +Y ++ L + YT++ K
Sbjct: 201 R---EFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRINQIIPRLKKERDYTIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTEEG+A E L ++L++ N V ALKA ++RDV Y+V++G+ +I
Sbjct: 258 SRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHTLFKRDVDYLVKDGQVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE +KI+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQNFFRMYSKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ VPTN+P IRVD + T + K+ +E++ + + RPVLVG
Sbjct: 378 TEAAEFKKIYNLDVVVVPTNMPMIRVDHTDVIYKTEKEKFSAVIEEIKELHKAKRPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS L Q GI H+VLNA K +EAE V+QAG+ +TISTNMAGRGTDI
Sbjct: 438 TISIEKSELLSKYLTQTGIQHHVLNA--KNHEKEAEIVSQAGQPGQVTISTNMAGRGTDI 495
Query: 397 ILG 399
LG
Sbjct: 496 KLG 498
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 110/174 (63%), Gaps = 8/174 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGD GS+RF +SL+D++ + F +
Sbjct: 498 GERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFYLSLEDDLLRIFGAEKIS 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + +I +E+ PIE I R + Q E F IRK L+E+D+V+ QR+ +Y+
Sbjct: 558 SI--MDKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLEYDDVMNRQRQVIYEQ 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 697
R+++L G + + + ++ VV++ + VD +HP W+L D++LK+F
Sbjct: 616 RRNVLKG--DELREDLLDMIEEVVEDFVPEYVDEKRHPDEWNLKGLEDRVLKQF 667
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E+ + M + R + ++++D W+DHL+ M+ L + +R +G ++P+ EY+ +G
Sbjct: 700 KEAEFGKPLMDYLIRMISIQSIDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYD 759
Query: 858 FFISMLSATRRLTVESLV 875
F+ M+ + T+E L
Sbjct: 760 LFMDMIRRIKEDTLEKLC 777
>gi|414588346|tpg|DAA38917.1| TPA: hypothetical protein ZEAMMB73_558348 [Zea mays]
Length = 419
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/243 (75%), Positives = 205/243 (84%), Gaps = 23/243 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQIIGGAVLHDG IAEMKT VVTVNDYLAQRDA
Sbjct: 148 MRHFDVQIIGGAVLHDGCIAEMKTGEGKTLVSTLAAYLNALTGKGVHVVTVNDYLAQRDA 207
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RVHRFLGL+VGLIQ GM +ERR++YRCDITYTNNSELGFDYLRDNL+ N EQLVM
Sbjct: 208 EWMGRVHRFLGLTVGLIQAGMKSDERRASYRCDITYTNNSELGFDYLRDNLSRNKEQLVM 267
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
RWP+PFHFAIVDEVDSVLIDEGRNPLLISGE ++D RYP+AAKVAELL++G+HYTVELK
Sbjct: 268 RWPRPFHFAIVDEVDSVLIDEGRNPLLISGEDNRDAVRYPIAAKVAELLMEGVHYTVELK 327
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
N+++LTE+G+A AE+ L T+DLWDENDPWARFVMNALKAK FYRRDVQYIVR+GKA+II
Sbjct: 328 GNNIDLTEDGVAHAEIILGTDDLWDENDPWARFVMNALKAKVFYRRDVQYIVRDGKAIII 387
Query: 218 NEL 220
NEL
Sbjct: 388 NEL 390
>gi|408828985|ref|ZP_11213875.1| preprotein translocase subunit SecA [Streptomyces somaliensis DSM
40738]
Length = 936
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 287/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHQFLGLKVGCILANMSPAQRREQYNCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA VDEVDS+LIDE R PL+ISG A + Y AK+ + L +G
Sbjct: 200 G---HNFACVDEVDSILIDEARTPLIISGPADQATKWYGDFAKLVQRLKRGEPGNPLKGV 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVQIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAKFSAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
+ G+P+LVG+TSVE SEYLS L ++GIPH VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHKKGQPILVGTTSVEKSEYLSQQLSKRGIPHEVLNA--KNHEREASIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E+ E EVK+LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAELAVKAESEEVKKLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFEARKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
EVL QR+ +Y R+ +L G E +QI +M +D I
Sbjct: 657 EVLNRQREVIYGERRRVLEG--EDLREQILHFMDDTIDAYI 695
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F++M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFVAMMDGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|253827704|ref|ZP_04870589.1| preprotein translocase, SecA subunit [Helicobacter canadensis MIT
98-5491]
gi|313141917|ref|ZP_07804110.1| preprotein translocase seca subunit [Helicobacter canadensis MIT
98-5491]
gi|253511110|gb|EES89769.1| preprotein translocase, SecA subunit [Helicobacter canadensis MIT
98-5491]
gi|313130948|gb|EFR48565.1| preprotein translocase seca subunit [Helicobacter canadensis MIT
98-5491]
Length = 852
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/421 (48%), Positives = 279/421 (66%), Gaps = 30/421 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+G IAEMKT +VTVNDYLAQRDA
Sbjct: 84 MRHFDVQLIGGMVLHEGKIAEMKTGEGKTLVATLPVCLNAMLGKGVHIVTVNDYLAQRDA 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERR-SNYRCDITYTNNSELGFDYLRDNLAANSEQLV 96
E M ++ FLG SVG+I G+ + R + Y CDITY N+E GFDYLRDN+ + Q V
Sbjct: 144 ETMRPLYEFLGYSVGVIVGGIYDDSHRLAQYSCDITYGTNNEFGFDYLRDNMKYDFNQKV 203
Query: 97 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 156
K +FAIVDEVDS+LIDE R PL+ISG A++ + Y +A VA L + YT++
Sbjct: 204 Q---KEHYFAIVDEVDSILIDEARTPLIISGPANRVLKNYEIANNVALKLKENEDYTIDE 260
Query: 157 KNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
KN + LTE GI AE ++L+ +N A + ALKA + +++D Y++R+G+ +
Sbjct: 261 KNRVILLTESGINHAEKLFGIDNLYSVDNAILAHHLDQALKANKLFKKDKDYVLRDGEVV 320
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ E RR+SEG+HQA+EAKEG+KI+ +S +A ITYQ+ F+LY KL+GMTGTA
Sbjct: 321 IVDEFTGRLSEGRRFSEGLHQALEAKEGVKIKEESQTLADITYQNYFRLYQKLAGMTGTA 380
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EFL+++ + V+ +PTNLP R DL + T R K+ +++ + + G+P+LV
Sbjct: 381 QTEASEFLQIYNLEVVSIPTNLPIKRKDLNDLIYKTEREKFNALVEKIIELNKKGQPILV 440
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+ S+E SE + DLLK + IPH+VLNA K A+EAE + AG K A+TI+TNMAGRG D
Sbjct: 441 GTASIEKSEKIHDLLKSKRIPHSVLNA--KNHAQEAEIIKDAGNKGAVTIATNMAGRGVD 498
Query: 396 I 396
I
Sbjct: 499 I 499
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV+ LGGL++IGT HESRRIDNQLRGR+GRQGDPG+++F +SL+D + + F D
Sbjct: 504 EVRELGGLYIIGTERHESRRIDNQLRGRSGRQGDPGTSQFYLSLEDPLLRIFGSDK--IK 561
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+++ ++ D+ IE + R + Q E +F RK L+E+D+V QRK +Y LR
Sbjct: 562 NIMDKLGLDDGEHIESKLVTRSVENAQKKVESMHFEARKHLLEYDDVANEQRKAIYRLRD 621
Query: 650 SILT 653
+L
Sbjct: 622 ELLN 625
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
E+E+ V ++TLD WRDHL M+ L + + +R + ++PL EYK + F+ ++S +
Sbjct: 714 EIEKLVYLQTLDNLWRDHLYIMDTLKTGIGLRGYNQKDPLVEYKKESYNLFLELVSQIKY 773
Query: 869 LTVESLVQY-WSSPMESQE 886
T++ L + + ES+E
Sbjct: 774 TTIKMLYKVQLKTNQESEE 792
>gi|282848897|ref|ZP_06258287.1| preprotein translocase, SecA subunit [Veillonella parvula ATCC
17745]
gi|416998840|ref|ZP_11939509.1| preprotein translocase, SecA subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|282581402|gb|EFB86795.1| preprotein translocase, SecA subunit [Veillonella parvula ATCC
17745]
gi|333976993|gb|EGL77852.1| preprotein translocase, SecA subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 811
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 278/429 (64%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA RD+
Sbjct: 80 MRHFDVQLMGGICLHNGNIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLATRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGLS GLI + +R+ Y CDITY N+E GFDYLRDN+ + Q+V
Sbjct: 140 EQMGRLYNFLGLSTGLIVANLDFNQRKEAYACDITYGTNNEFGFDYLRDNMVTDVVQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG + Y AK+ L++ Y ++ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGQRSTDNYYKLAKIVPHLIKDEDYVIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ T+ GIA E L +L+D EN + +L+A RD Y+V++G+ +I
Sbjct: 257 QKTIAPTDSGIAKVEKMLGVENLYDAENIELNHLLGASLRAYAMMHRDTDYVVKDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK++ +S +A +T+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASVTFQNYFRMYDKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEEKEF+ ++ + VI +P N P IR+DLP Q F T K+ + ++G+P+L+G
Sbjct: 377 TEEKEFIDIYGLEVIPIPPNKPLIRMDLPDQIFKTKAAKYRAVVRNAVERHQIGQPILIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LSD+L + G+PH VLNA K+ +EAE VA AG+ +TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEELSDMLLRAGVPHKVLNA--KHHEQEAEIVAAAGQMGMVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 495 TLGEGVPEL 503
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 67/347 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 497 GEGVPELGGLAILGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRIFGADNIT 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I + + Q E + + IRK ++E+D+V+ QR+ +Y+
Sbjct: 557 GI--MDKLGMEEDEPIEHSLITKSIERAQKKVEDHNYNIRKYVLEYDDVMNQQREVLYEQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL NES + I + + +V E + D +P W + L K L
Sbjct: 615 RRRILR--NESLRETINEMIDKLVTESVDAYADEKLYPEEWDYEGLYKH--------LSQ 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F EE+ ++S D+ + DL L+R L I ++
Sbjct: 665 YFL----------TEEI--MSSQDMEEYSRQDL----------------LERLLEIAHEE 696
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
Y+ ++ LG+ + + ++E+A++++ +D W +HL
Sbjct: 697 ------YQDRVDM----LGEAMFS-----------------QLEKAIMLRVVDNKWMEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
NM+ L + +R++G +NPL EYK + F +M++A + T+ +L
Sbjct: 730 DNMDMLREGIGLRAYGQKNPLVEYKFEAFDMFQNMIAAIQDETIMAL 776
>gi|83312999|ref|YP_423263.1| preprotein translocase subunit SecA [Magnetospirillum magneticum
AMB-1]
gi|123540723|sp|Q2W0C1.1|SECA_MAGSA RecName: Full=Protein translocase subunit SecA
gi|82947840|dbj|BAE52704.1| Preprotein translocase subunit SecA [Magnetospirillum magneticum
AMB-1]
Length = 901
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 282/440 (64%), Gaps = 35/440 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH G I+EMKT VVTVNDYLA+RD+E
Sbjct: 82 RHFDVQLLGGMVLHQGRISEMKTGEGKTLVATLPVYLNALTAKGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +V+RFLGL+VG+I GM ER+ Y CD+TY N+ELGFDYLRDN+ E++V R
Sbjct: 142 WMGQVYRFLGLTVGVIVHGMDDLERQQAYACDVTYGTNNELGFDYLRDNMKFRLEEMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AIVDEVDS+L+DE R PL+ISG + Y + K+ LV + + K
Sbjct: 202 ---PFNYAIVDEVDSILVDEARTPLIISGPTEDNSDLYRLVDKLMPSLV-AEDFEKDEKV 257
Query: 159 NSVELTEEGIALAEMALETNDL-----WD-ENDPWARFVMNALKAKEFYRRDVQYIVRNG 212
+V LT+ G E L T DL +D N V AL+A + + RDV YIV+N
Sbjct: 258 RAVTLTDRGTEHVEEMLRTADLMKGTLYDIGNVSLVHHVNQALRAHKLFTRDVDYIVKND 317
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
K +II+E TGR+ E RR+SEG+HQA+EAKEG+ IQ ++ +A IT+Q+ F+LYPKL+GMT
Sbjct: 318 KVIIIDEFTGRMMEGRRYSEGLHQALEAKEGVTIQNENQTLASITFQNYFRLYPKLAGMT 377
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA TE EF +++ + V+E+PTNL R D + + TA+ K+E +E +P
Sbjct: 378 GTAMTEAGEFAEIYNLEVVEIPTNLAVSRTDHDDEVYRTAKEKYEAIVTLIEECRGRMQP 437
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TS+E SE LSD+LK++ IPH VLNAR Y +EA VAQAG +TI+TNMAGR
Sbjct: 438 VLVGTTSIEKSELLSDMLKKKKIPHQVLNAR--YHEQEAYIVAQAGVPGGVTIATNMAGR 495
Query: 393 GTDIILGGNPKMLAKKIIED 412
GTDI LGGN M + + D
Sbjct: 496 GTDIQLGGNLDMRTRMELAD 515
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 14/176 (7%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+G+ HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F S +
Sbjct: 539 KVRESGGLYVVGSERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRIFG---SQRM 595
Query: 590 DLISRITNDEDMPIEGDAIV-----RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHV 644
D + + +D G+AIV + L Q E F IRK+L++FD+V+ QRK +
Sbjct: 596 DGMLQKLGLKD----GEAIVHPWINKALEKAQQKVEARNFDIRKNLLKFDDVMNDQRKVI 651
Query: 645 YDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
Y+ R+ +++ + S++I + V+ E++ + + W + L +E + +
Sbjct: 652 YEQRKDLMSA--DDVSEEIVAFRHEVIAEMVARCIPERAYADQWDVAALHEEVLRV 705
>gi|408678466|ref|YP_006878293.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Streptomyces venezuelae ATCC 10712]
gi|328882795|emb|CCA56034.1| Protein export cytoplasm protein SecA ATPase RNA helicase
[Streptomyces venezuelae ATCC 10712]
Length = 936
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/442 (46%), Positives = 282/442 (63%), Gaps = 41/442 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGLS+G I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHRFLGLSIGCILANMTPAQRREQYNCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFACVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEPGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVMDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVAIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P IR D + T K+ ++
Sbjct: 377 SKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMIRKDQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K+ REA VAQAGR+ A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KHHEREASIVAQAGRRGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAK 407
+TNMAGRGTDI LGGNP LA+
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAE 516
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 13/217 (5%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEKAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVETQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EVL QR+ +Y R+ +L G E +QI +M +D+ I W LD+L
Sbjct: 657 EVLNRQREVIYGERRRVLEG--EDLHEQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRLW 713
Query: 695 KEF-----IAIAGKILDDLF---AGISGDTLLKSIEE 723
F + + + L+D AGI+ + + +SI++
Sbjct: 714 NAFKQLYPVKVTVEELEDAAGDRAGITAEFIAESIKD 750
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|52082064|ref|YP_080855.1| preprotein translocase subunit SecA [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|319647930|ref|ZP_08002148.1| translocase subunit secA [Bacillus sp. BT1B_CT2]
gi|404490945|ref|YP_006715051.1| preprotein translocase subunit SecA [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423684070|ref|ZP_17658909.1| preprotein translocase subunit SecA [Bacillus licheniformis WX-02]
gi|81825172|sp|Q65EC5.1|SECA_BACLD RecName: Full=Protein translocase subunit SecA
gi|52005275|gb|AAU25217.1| translocase binding subunit (ATPase) [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52349955|gb|AAU42589.1| preprotein translocase subunit SecA [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|317390271|gb|EFV71080.1| translocase subunit secA [Bacillus sp. BT1B_CT2]
gi|383440844|gb|EID48619.1| preprotein translocase subunit SecA [Bacillus licheniformis WX-02]
Length = 841
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 275/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+IAEMKT VVTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGVALHEGNIAEMKTGEGKTLTSTMPVYLNALSGKGVHVVTVNEYLASRDAEEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSLSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKADQDYTYDVKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEG+ AE A +L+D + + ALKA +DV Y+V +G+ +I++
Sbjct: 259 VQLTEEGMTKAEKAFGIENLFDVRHVALNHHIAQALKAHAAMHKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P R D P + T GK++ ++V + +G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPIARDDRPDLIYRTMEGKFKAVAEDVAQRYMVGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISRLLKNKGIPHQVLNA--KNHEREAQIIEDAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMKRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + R + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDARKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R ++ N + ++A ++ + P W+LD L++ + LD+
Sbjct: 614 RFEVIDSDN--LRSIVENMIKASLERAVASYTPKEDLPEEWNLDGLVE---LVNANFLDE 668
Query: 708 LFAGI-SGDTLLKSIEELPEL 727
G+ D K EE+ EL
Sbjct: 669 --GGVEKSDIFGKEPEEITEL 687
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E RY M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEERYGSEQMREFEKVIVLREVDTKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F +M++A
Sbjct: 759 MFENMIAA 766
>gi|303249273|ref|ZP_07335506.1| preprotein translocase, SecA subunit [Desulfovibrio fructosovorans
JJ]
gi|302489312|gb|EFL49268.1| preprotein translocase, SecA subunit [Desulfovibrio fructosovorans
JJ]
Length = 838
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 275/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEMKT ++TVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGITLHQGKIAEMKTGEGKTLVATLPVVLNALSGKGVHLITVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ FLGLSVG I G+ ER++ Y DITY N+E GFDYLRDN+ EQLV
Sbjct: 141 AWMGKLYNFLGLSVGTIVHGLDDPERQAAYNADITYGTNNEFGFDYLRDNMKFYKEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +FAIVDEVDS+LIDE R PL+ISG+A Y +L + +TV+ K
Sbjct: 201 R---ELNFAIVDEVDSILIDEARTPLIISGQAEDSSTLYARIDAFIPMLHKERDFTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT++G+A E L+ ++L+D N V+ ALKA ++RDV Y+V++G+ LI
Sbjct: 258 ARTVLLTDDGVARMEQVLKIDNLYDAANITLQHHVLQALKAHHIFQRDVDYVVKDGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE + ++A++ +A IT+Q+ F++Y KL GMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEHVDVEAENQTLATITFQNYFRMYDKLGGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PTN P IR D P + T K+ ++V+ + G+PVLVG
Sbjct: 378 TEAVEFREIYDLEVISIPTNQPMIRKDFPDLVYKTQHEKFAAIAKDVKELHGRGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS LLK+ G+PH+VLNA K +EAE VAQAG +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELLSGLLKKSGVPHDVLNA--KNHEKEAEIVAQAGHAGRVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 166/360 (46%), Gaps = 76/360 (21%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF ++L D++ + F D
Sbjct: 498 GEGVTDLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLALDDDLMRLFGSDRLK 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ ++ PIE + R + Q E + F IRK L+E+D V+ QR+ +Y
Sbjct: 558 GI--MDKLGMEDGEPIENRMVSRAIENAQKRVEAHNFEIRKQLLEYDNVMNQQREVIYSR 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ ++ E+ ++F V D I +I+D+
Sbjct: 616 RRELM----ETSEPEVF-----VTDAI---------------------------EEIVDE 639
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+FA + E+L S+ DL LK L +D
Sbjct: 640 IFAPLEAAKGHHEAEDLETAGSL------IEDL--------------LDLKMALTTGEED 679
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
K +A + +K L D+ Y +E+ R L+ +LD W++HL
Sbjct: 680 EKKAVLDKALSR--QKELSDVAGQQY--------------REIARYFLLDSLDRHWKEHL 723
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSSPMESQ 885
+ M+ L + +R +G ++P +EYK +G F ++++ R T+ +L VQ S E +
Sbjct: 724 LAMDHLRDGIGLRGYGQKDPKQEYKREGFELFQYLITSIRDATIRALSRVQIRSEAPEQE 783
>gi|381202607|ref|ZP_09909720.1| preprotein translocase subunit SecA [Sphingobium yanoikuyae
XLDN2-5]
Length = 910
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 279/442 (63%), Gaps = 36/442 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA RD
Sbjct: 81 MRHFDVQMIGGIVLHRGEIAEMRTGEGKTLVATLATYLNALEGKGVHVVTVNDYLASRDC 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+ G+I + ++RR Y DITY N+ELGFDYLRDN+ + +V
Sbjct: 141 EWMGQVYRFLGLTTGVIVPNLSEDQRREAYNADITYATNNELGFDYLRDNMKFDRGAMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+ AIVDEVDS+LIDE R PL+ISG Y + + LV+ Y + K
Sbjct: 201 R---PFNHAIVDEVDSILIDEARTPLIISGPTDDKSELYVAVDAIVKQLVEE-DYEKDEK 256
Query: 158 NNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
++ LTE+G E LE N+L+D EN V AL+A +RRD+ YIV+
Sbjct: 257 QRTITLTEDGTEKIERLLEAAGLLQGNNLYDFENTQVVHHVNQALRAVVMFRRDIDYIVK 316
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +II+E TGR+ + RRWS+G+HQAVEAKEG++I+ ++ +A IT+Q+ F++YPK+SG
Sbjct: 317 DGKVVIIDEFTGRMMDGRRWSDGLHQAVEAKEGVQIEPENQTLASITFQNYFRMYPKISG 376
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF ++++M V+ +PTN P RVD + K+ + ++ G
Sbjct: 377 MTGTASTEATEFYEIYKMNVVTIPTNRPVQRVDEEDTFYKNLEDKFRGIARTIKEHAEKG 436
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+ S+E SE LS+ L Q+G+ H VLNAR + EA VAQAGRK A+TI+TNMA
Sbjct: 437 QPVLVGTVSIEKSEMLSEFLNQEGVKHAVLNAR--FHESEAHIVAQAGRKGAVTIATNMA 494
Query: 391 GRGTDIILGGNPKMLAKKIIED 412
GRGTDI LGGN +M + + D
Sbjct: 495 GRGTDIKLGGNLEMRVEDELRD 516
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
EV E EV GGL V+ T HESRRIDNQLRGR+GRQGDPG +RF +SL D++ +
Sbjct: 531 EVEIEAEKQEVLAAGGLFVLATERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLMRI 590
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F DT +A + S + + E +P + + + Q E + IRK +VE+D+V+ Q
Sbjct: 591 FGPDTMFAKMIRSNLEDGEALP-PSKWLSKAIETAQRKVEARNYDIRKQVVEYDDVMNDQ 649
Query: 641 RKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
RK +Y+ R I+ E+ + V++++ + P +P W +++L
Sbjct: 650 RKVIYEQRSDIMDA--ETVDDVVTDMRHETVNDLVGASCPPGTYPEQWDMERL 700
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
++ + L + A+ QE D +M +E+++++++LD W++HL ++ L V++
Sbjct: 727 MIEERLAGLADAAIAEKTQEVEAADWHM--IEKSIMLQSLDHHWKEHLSTLDALRQVVHL 784
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQELF 888
R++ + P+ EYK + F ML R S+ + Q LF
Sbjct: 785 RAYAQKTPINEYKQEAFALFERMLENIREDVTSSIARVQFRMEAPQPLF 833
>gi|296118809|ref|ZP_06837385.1| preprotein translocase, SecA subunit [Corynebacterium ammoniagenes
DSM 20306]
gi|295968298|gb|EFG81547.1| preprotein translocase, SecA subunit [Corynebacterium ammoniagenes
DSM 20306]
Length = 848
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/470 (44%), Positives = 297/470 (63%), Gaps = 35/470 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T +VTVNDYLA+RDAE
Sbjct: 80 KHYKVQIMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALEGKGVHIVTVNDYLARRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR+LG+SVG+I M P ER+ Y CDITY N+ELGFDYLRDN+ + V R
Sbjct: 140 MMGRVHRWLGVSVGVILNEMRPAERKEAYDCDITYGTNNELGFDYLRDNMVRTLKDCVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+ IVDEVDS+LIDE R PL+ISG Y V A +A + G+HY V++K
Sbjct: 200 G---HHYCIVDEVDSILIDEARTPLIISGPVDGSSQFYGVFATLAPRMRAGIHYEVDIKK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 257 RTVGVLEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNALKAKELFTRDKDYIVRDGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKEG++I+ ++ +A +T Q+ F+LY K+SGMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKEGVEIKNENQTLATVTLQNFFRLYEKISGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E ++ + V+ +PTN PN R D + + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNSIYGLDVVTIPTNRPNQREDHSDRIYKTQEAKFAAVVDDIAEHVDNGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS+LL ++G+ H+VLNA K E VA+AGR +T++TNMAGRGTDI+
Sbjct: 437 TSVERSEYLSELLTKRGVKHSVLNA--KQHEEEGNIVARAGRPGNVTVATNMAGRGTDIV 494
Query: 398 LGGNPKMLAKKIIEDRLLLLLT-----REALNVEV-DDKTSSPKVLSEIK 441
LGGNP+++ + +R L +EA + E+ D++ S ++ E++
Sbjct: 495 LGGNPEVILDMKLRERGLDPFDDEEKYQEAWDAEIQDERERSQRLGDEVR 544
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 171/375 (45%), Gaps = 90/375 (24%)
Query: 519 DCEVHCSNE-----GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 573
D E+ E G EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S+
Sbjct: 526 DAEIQDERERSQRLGDEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSM 585
Query: 574 QDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
+DE+ +F + ++++R+ +D+PI+ + + G Q E F +RK+++++
Sbjct: 586 RDELMVRFVGQSME--NMMNRLNVPDDVPIDSKMVSNSVKGAQAQVENQNFEMRKNVLKY 643
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
DEVL QRK VY R IL ++ I +++++ + + V Y W L
Sbjct: 644 DEVLNEQRKVVYATRHEILEASD------IKDNIRSMIIDTVTDYVAAATATGYVEDWDL 697
Query: 691 DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGI 750
++L N++D+ Y P+L
Sbjct: 698 EQL---------------------------------WNALDV--LYGPNLD--------- 713
Query: 751 RRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDV----- 805
+ +L Y A L + L D L++ L ++YDD+
Sbjct: 714 --------------AQELVDGSEYGAPGELTAEQLTDALVSDAL-----AQYDDLEERIS 754
Query: 806 ------YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
M++ ER +++ +D WR+HL M+ L + +R+ R+PL EY+ +G F
Sbjct: 755 AIGGEKQMRDTERMIILPVIDNKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMF 814
Query: 860 ISMLSATRRLTVESL 874
+M + TV L
Sbjct: 815 NAMNEGIKEETVRQL 829
>gi|85722515|gb|ABC77458.1| protein translocase subunit [Syntrophus aciditrophicus SB]
Length = 895
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ+IGG VLH+G IAEMKT +VTVNDYLA RDA
Sbjct: 135 MRPFDVQLIGGMVLHEGKIAEMKTGEGKTLVATMPMYLNALEGKGAHLVTVNDYLASRDA 194
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I GM +ERR+ Y CDITY N+E GFDYLRDN+ + E
Sbjct: 195 EWMSPIYSFLGLSVGVIVHGMDDDERRAAYACDITYGTNNEFGFDYLRDNMKYSLEDYTQ 254
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F+++IVDEVDS+LIDE R PL+ISG + + +Y ++ L + YT++ K
Sbjct: 255 R---EFNYSIVDEVDSILIDEARTPLIISGPSEESTDKYYRINQIIPRLKKERDYTIDEK 311
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTEEG+A E L ++L++ N V ALKA ++RDV Y+V++G+ +I
Sbjct: 312 SRTVVLTEEGVARVESYLNVSNLYEPRNIDTLHHVNQALKAHTLFKRDVDYLVKDGQVII 371
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE +KI+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 372 VDEFTGRIMPGRRYSDGLHQALEAKEKVKIEQENQTLASITFQNFFRMYSKLAGMTGTAD 431
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF K++ + V+ VPTN+P IRVD + T + K+ +E++ + + RPVLVG
Sbjct: 432 TEAAEFKKIYNLDVVVVPTNMPMIRVDHTDVIYKTEKEKFSAVIEEIKELHKAKRPVLVG 491
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS L Q GI H+VLNA K +EAE V+QAG+ +TISTNMAGRGTDI
Sbjct: 492 TISIEKSELLSKYLTQTGIQHHVLNA--KNHEKEAEIVSQAGQPGQVTISTNMAGRGTDI 549
Query: 397 ILG 399
LG
Sbjct: 550 KLG 552
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 110/174 (63%), Gaps = 8/174 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGD GS+RF +SL+D++ + F +
Sbjct: 552 GERVAELGGLHILGTERHESRRIDNQLRGRSGRQGDMGSSRFYLSLEDDLLRIFGAEKIS 611
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ + +I +E+ PIE I R + Q E F IRK L+E+D+V+ QR+ +Y+
Sbjct: 612 SI--MDKIGIEENQPIEHKLISRAIENAQKRVEGQNFDIRKHLLEYDDVMNRQRQVIYEQ 669
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 697
R+++L G + + + ++ VV++ + VD +HP W+L D++LK+F
Sbjct: 670 RRNVLKG--DELREDLLDMIEEVVEDFVPEYVDEKRHPDEWNLKGLEDRVLKQF 721
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E+ + M + R + ++++D W+DHL+ M+ L + +R +G ++P+ EY+ +G
Sbjct: 754 KEAEFGKPLMDYLIRMISIQSIDSHWKDHLLAMDHLKEGIGLRGYGQKDPVREYQKEGYD 813
Query: 858 FFISMLSATRRLTVESLV 875
F+ M+ + T+E L
Sbjct: 814 LFMDMIRRIKEDTLEKLC 831
>gi|221195385|ref|ZP_03568440.1| preprotein translocase, SecA subunit [Atopobium rimae ATCC 49626]
gi|221184572|gb|EEE16964.1| preprotein translocase, SecA subunit [Atopobium rimae ATCC 49626]
Length = 921
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/436 (45%), Positives = 284/436 (65%), Gaps = 28/436 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH G+IAEMKT +VTVNDYLA+RD+
Sbjct: 80 LRHFDVQLVGGIALHKGTIAEMKTGEGKTLVSTLAGYLNALSGNGVHIVTVNDYLAKRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++++FLG++VGL+Q GM ++ Y D+TY NSE GFDYLRDN+ + M
Sbjct: 140 EWMGKIYKFLGMTVGLLQNGMRLSLKKPAYEADVTYGTNSEFGFDYLRDNMVTRPD---M 196
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R + +FAIVDEVDS+LIDE R PL+ISG +K Y A+ L+ + + ++
Sbjct: 197 RVQRGHNFAIVDEVDSILIDEARTPLIISGAGTKSAGTYRDFARAVRGLIPEVDFEMDEA 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+++ T+ G+A E AL D+ + ALKA+ + RD QY+V +G+ I+
Sbjct: 257 KHTIATTDTGLAKVERALGMEIYGDDAGQLVNHLQQALKAEFMFHRDQQYVVMDGEVKIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E RR+SEG+HQA+EAKEG++++ ++ +A IT Q+ F +Y KLSGMTGTA T
Sbjct: 317 DEFTGRIMEGRRYSEGLHQAIEAKEGVEVREENQTLATITLQNYFLMYKKLSGMTGTAMT 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E+ EF +++ +PV +P N P IRVD + T K+ +VE G+PVLVG+
Sbjct: 377 EDAEFREVYHVPVQVIPPNRPVIRVDHDDLVYRTIDAKFHAVVDDVEERHAKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S++NSE +S LL+++GI H+VLNA K+ REA+ VAQAGR+ A+TI+TNMAGRGTDI+
Sbjct: 437 VSIDNSERISRLLEKKGITHSVLNA--KFHEREAQIVAQAGREGAVTIATNMAGRGTDIL 494
Query: 398 LGGNPKMLAKKIIEDR 413
LGGNP +LA+ ++ ++
Sbjct: 495 LGGNPDVLAEDLLREQ 510
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 11/184 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C E V GGL VIGT HESRRIDNQLRGR+GRQGDPG T F +SL+D++ ++F
Sbjct: 533 CQKERQHVLNAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGETEFYLSLEDDLMRRFGG 592
Query: 584 DTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
D + ++ R +D PI+ + R + G Q E+ F +RK+++++D+V+ QR+
Sbjct: 593 DRMDRISAMMKRYDMPDDQPIQAKIVTRAVEGAQHKVEEVNFAMRKNVLDYDDVMNKQRQ 652
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQA--VVDEIIFGNVDPLKHPR-YWSLDKLLKEFIA 699
+Y R IL G + + A VVDE G PR W LD L+K
Sbjct: 653 VIYGERNKILDGKDLMALIEGVTAATAKRVVDEYCAG-------PREEWDLDGLVKWLKE 705
Query: 700 IAGK 703
+ G+
Sbjct: 706 LTGR 709
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 801 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFI 860
R + ++E+ V+++ +D W +L M+ L + + +R FG R+PL EYK + F
Sbjct: 742 RLGEEVIQELSAQVMLRVIDTRWMTYLQEMDYLKTGIGLRGFGQRDPLVEYKTEAYAAFT 801
Query: 861 SMLS 864
+++
Sbjct: 802 LLVN 805
>gi|114565807|ref|YP_752961.1| hypothetical protein Swol_0238 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122319048|sp|Q0B0B4.1|SECA_SYNWW RecName: Full=Protein translocase subunit SecA
gi|114336742|gb|ABI67590.1| protein translocase subunit secA [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 830
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 273/422 (64%), Gaps = 29/422 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT +VTVNDYLA RDA
Sbjct: 80 MRHFDVQLIGGMVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAARDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM V + GLSVGLI G+ EER++ Y CD+TY N+E+GFDYLRDN+ +++ +V
Sbjct: 140 DWMGPVLEYCGLSVGLIVHGLSYEERKAAYACDVTYGTNNEMGFDYLRDNMVVSADNMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+L+DE R PL+ISGE K Y AK L Y V+ K
Sbjct: 200 R---ELHYAIIDEVDSILVDEARTPLIISGEGDKPTTLYYQIAKFIPRLRNEEDYKVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ V LTEEG+ E +L EN A V LKA +RD Y++++ + +I+
Sbjct: 257 AHVVTLTEEGVKKVEKYFTIENL-SENMELAHHVNQGLKAHSLMKRDRDYVIKDEQVIIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KL GMTGTAKT
Sbjct: 316 DEFTGRLMFGRRYSDGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYHKLGGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ M V+ +PT+ P IR D + T GK+ +++ S + +PVLVG+
Sbjct: 376 EEEEFRKIYGMDVVSIPTHNPMIREDQADMVYRTEEGKFRAVVEDIISRHQAKQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS +L ++G+ H VLNA KY +EA+ +AQAG++ +TI+TNMAGRGTDI+
Sbjct: 436 ISVEKSEYLSAMLAKRGVKHQVLNA--KYHEKEAQIIAQAGQEETVTIATNMAGRGTDIV 493
Query: 398 LG 399
LG
Sbjct: 494 LG 495
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 171/350 (48%), Gaps = 71/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G ++ LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF VSL+D++ + F ++
Sbjct: 495 GEGIQELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYVSLEDDLMRLFG--SAN 552
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ D+DMPIE I R + Q E F IRK+++E+D+V+ QR+ +Y
Sbjct: 553 VEGLMDRLGMDDDMPIEHKMISRAIESAQKKVEARNFSIRKNVLEYDDVINQQREVMYGE 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L G E + + + V+++ + K+ W L L
Sbjct: 613 RRKVLFG--EDLKETVASMVDDVIEQAVERFAGEFKYSDEWDLPGFLS------------ 658
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
+ +SI P+ N D+ RG+R+ + + +LA +
Sbjct: 659 --------YIEQSIIPQPDFNQEDM---------------RGMRK--NEVVAFLAEKTQT 693
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L + + ++R E+E+A+L++ +D W DH+
Sbjct: 694 LYEQREKEMGSEIMR--------------------------ELEKAILLRIIDEKWMDHI 727
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
M++L + +++R++G ++PL EYK + F M+ + + E +V+Y
Sbjct: 728 DAMDQLRNGISLRAYGQKDPLIEYKFEAFEAFQMMIESMK----EDVVRY 773
>gi|415883541|ref|ZP_11545570.1| preprotein translocase subunit SecA [Bacillus methanolicus MGA3]
gi|387591336|gb|EIJ83653.1| preprotein translocase subunit SecA [Bacillus methanolicus MGA3]
Length = 835
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 277/420 (65%), Gaps = 29/420 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQ++GG LHDG+IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YKVQLMGGIALHDGNIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLASRDANEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGL+VGL GM EE++ Y DITY N+E GFDYLRDN+ Q V R
Sbjct: 142 GKLYEFLGLTVGLNLNGMSQEEKQKAYAADITYGTNNEFGFDYLRDNMVLYKHQKVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P ++A++DEVDS+LIDE R PL+ISG A K Y A L + + YT + K S
Sbjct: 200 -PLYYAVIDEVDSILIDEARTPLIISGTAQKSTQLYIQANAFVRTLKKDVDYTYDEKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWDENDPWARFVMN-ALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D + +N ALKA RDV Y+V++G+ +I+++
Sbjct: 259 VQLTEEGITKAERAFGIDNLYDISHVTLNHHINQALKANVSMHRDVDYVVQDGEIVIVDQ 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMRGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P +AT GK+ +++ + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMNVVVIPTNKPVIREDRPDLIYATMEGKFRAVVEDIAERHKKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SEY+S LL+++GI HNVLNA K REAE +AQAG++ A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSEYISKLLQKKGIRHNVLNA--KNHEREAEIIAQAGQRGAVTIATNMAGRGTDIKLG 496
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 93/153 (60%), Gaps = 8/153 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GEGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNMK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MMERLGMDDSQPIQSKMVSKAVESAQKRVEGNNFDARKQLLQYDDVLRQQREIIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
R +L S+ + + ++ ++ +I NV+
Sbjct: 614 RDEVLE------SENLREIVEGMIQSVIERNVE 640
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ ++++ +D W DH+ M +L +++R++G +PL EY+ +G F SM+++
Sbjct: 708 MREFEKVIVLRAVDSKWMDHIDAMEQLRQGIHLRAYGQIDPLREYQSEGYAMFESMVAS 766
>gi|403746667|ref|ZP_10955060.1| preprotein translocase, SecA subunit [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120526|gb|EJY54898.1| preprotein translocase, SecA subunit [Alicyclobacillus hesperidum
URH17-3-68]
Length = 796
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/434 (48%), Positives = 276/434 (63%), Gaps = 30/434 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VLH+G +AEMKT VVTVNDYLA+RDAE
Sbjct: 79 RHYDVQLMGGMVLHEGRVAEMKTGEGKTLVATLPSYLNGLTGHGVHVVTVNDYLAKRDAE 138
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ +VHRFLGL+VG M P ++R Y DITY N+E GFDYLRDN+ + +V R
Sbjct: 139 YTGQVHRFLGLTVGYNGHDMTPAQKREAYMADITYGTNNEFGFDYLRDNMVMTLDDMVQR 198
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
HFAIVDEVDS+LIDE R PL+ISG A K Y A + L Y V+ K
Sbjct: 199 R---LHFAIVDEVDSILIDEARTPLIISGPAEKSADLYFRADLLVRRLKPEEDYEVDEKM 255
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ LT+ GI AE ++L+D +N + ALKA RD Y+V + I+
Sbjct: 256 RTANLTDSGIRKAEAFFGVSNLFDPDNVTLMHHITQALKAHGLMHRDKDYVVMGDEICIV 315
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E RR+SEG+HQA+EAKEG+++Q +S +A IT Q+ F++Y KLSGMTGTAKT
Sbjct: 316 DEFTGRLMEGRRYSEGLHQAIEAKEGVRVQNESKTLATITLQNYFRMYEKLSGMTGTAKT 375
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EEKEF++++ M V+ +PTN P R DL + T R K+ +V R+G+PVLVG+
Sbjct: 376 EEKEFVEIYGMDVVVIPTNRPLARKDLGDVIYKTERAKFNAVVNDVVERHRIGQPVLVGT 435
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TS+E SE +S LL Q+G+PH VLNA K+ AREAE VA AG++ +TI+TNMAGRGTDI+
Sbjct: 436 TSIEKSELVSHLLHQRGVPHQVLNA--KHHAREAEIVALAGQRGMVTIATNMAGRGTDIL 493
Query: 398 LG-GNPKMLAKKII 410
LG G P++ II
Sbjct: 494 LGEGVPELGGLHII 507
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS++F +SL+D++ + F +
Sbjct: 495 GEGVPELGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSQFFLSLEDDLLRLFGSENIR 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ R+ +ED PIE + + Q E + +RK ++ +D+VL QR+ +Y
Sbjct: 555 R--LMDRLGLEEDQPIEHKMLTGAMERAQKKVEGNNYDLRKHVLRYDDVLNKQREVIYRQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+ IL E+ + + + +VD ++ + P W + LL+
Sbjct: 613 RRQILE--RENLREVVEGMLDDLVDHMLEVYCSEEQIPEDWDIPALLQ 658
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%)
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+++E+ER VL++ +D W DH+ M++ V++RS+G +PL Y+ +G F +M+ +
Sbjct: 705 FLRELERVVLLRAVDSKWMDHIDAMDQFRQGVHLRSYGQADPLVIYQKEGFEMFEAMIHS 764
>gi|242277690|ref|YP_002989819.1| preprotein translocase subunit SecA [Desulfovibrio salexigens DSM
2638]
gi|259494997|sp|C6BVR6.1|SECA_DESAD RecName: Full=Protein translocase subunit SecA
gi|242120584|gb|ACS78280.1| preprotein translocase, SecA subunit [Desulfovibrio salexigens DSM
2638]
Length = 837
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 280/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++GG VLH G IAEMKT ++TVNDYLA+RDA
Sbjct: 81 MRHYDVQMVGGMVLHSGRIAEMKTGEGKTLVATLPAVLNALSGKGVHLITVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+VG++ G+ EER+ Y CDITY N+E GFDYLRDN+ EQLV
Sbjct: 141 EWMGKLYNFLGLTVGVVVHGLSDEERQEAYGCDITYGTNNEFGFDYLRDNMKFYKEQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R ++ IVDEVDS+LIDE R PL+ISG + + Y + LL + + V+ K
Sbjct: 201 R---ELNYCIVDEVDSILIDEARTPLIISGASEDATSMYGRVNSMIPLLKRDEDFEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
S+ +T++G+ E L ++L+D ++ + +M +KA + RDV YIV++G+ +I
Sbjct: 258 GRSITMTDDGVMKCEQILGIDNLYDSQHISFQHHIMQGIKAHHLFSRDVDYIVKDGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+K+++++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEGVKVESENQTLASITFQNYFRMYNKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + VI +PTN IR D P + T + K+ ++ + ++ G+PVLVG
Sbjct: 378 TESVEFAQIYDLEVIVIPTNTAMIRKDFPDSIYKTQQEKYNAIADDIAAKYKKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S LLK++ IPHNVLNA K+ +EAE VA+AG K +TI+TNMAGRGTDI
Sbjct: 438 TVSIEKSELVSSLLKKRKIPHNVLNA--KHHQQEAEIVAEAGHKGHVTIATNMAGRGTDI 495
Query: 397 ILG 399
LG
Sbjct: 496 KLG 498
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 156/359 (43%), Gaps = 92/359 (25%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGR+GRQGDPGSTRF ++L D++ + F D
Sbjct: 498 GEGVLEIGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSTRFYLALDDDLMRLFGSDRIA 557
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +E PIE + + + Q E H +++
Sbjct: 558 GI--MDKLGMEEGEPIENGMVTKAIENSQKKVEG---------------------HNFEI 594
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS--LDKLLKEFIAIAGKIL 705
R+ +L N Q+ E+I+ L+ +S ++++ EF+ ++
Sbjct: 595 RKQLLDYDNVMNQQR----------EVIY----TLRRDVMYSEDMNEMTAEFVE---ELF 637
Query: 706 DDLFAGI---SGDTLLKSIEE-----LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL 757
DD F + G L EE L EL I+ N + LP
Sbjct: 638 DDAFYAVEEAKGKPLDAETEEMVRVRLDELFGINRNEEFKEALPT-----------REQA 686
Query: 758 KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK 817
+ W ++ L+ ++ES D + E++R L++
Sbjct: 687 EEW-----------------------------VSEILDTLKESAGD--HYHEIQRYFLLE 715
Query: 818 TLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
LD W++HL+NM+ L + +R +G ++P EYK +G F ML + TV +L
Sbjct: 716 ALDRNWKEHLLNMDHLREGIGLRGYGQKDPKHEYKREGFELFREMLGRIKENTVRALCH 774
>gi|395006127|ref|ZP_10389965.1| preprotein translocase, SecA subunit [Acidovorax sp. CF316]
gi|394315877|gb|EJE52644.1| preprotein translocase, SecA subunit [Acidovorax sp. CF316]
Length = 921
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/473 (46%), Positives = 291/473 (61%), Gaps = 51/473 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLLGGMALHFGKIAEMRTGEGKTLTATLPVYLNALSDKGVHVVTVNDYLANRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R++ FLGLSVG+ M EE+++ YR DITY N+E GFDYLRDN+ +
Sbjct: 141 QWMGRLYNFLGLSVGINLPNMPREEKQAAYRADITYGTNNEYGFDYLRDNMVYEAAD--- 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R + +FAIVDEVDS+LIDE R PL+ISG+A A Y KV LL+
Sbjct: 198 RVQQGLNFAIVDEVDSILIDEARTPLIISGQAEDHTAMYIAMNKVVPLLIRQEGEADPRT 257
Query: 148 -QGL----HYTVELKNNSVELTEEGIALAEMALETNDLWDEN----DPWARFVMN----A 194
+G+ +T++ K + V LTE+G AE L ++ L E DP +M+ A
Sbjct: 258 GEGVTKPGDFTLDEKTHQVFLTEQGHESAERILASHGLIAEGASVYDPANITLMHHLYAA 317
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
L+A Y RD Y+V+NG+ +I++E TGR+ RRWSEG+HQAVEAKEG+ IQA++ +A
Sbjct: 318 LRANHLYHRDQHYVVQNGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVNIQAENQTLA 377
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT+Q+ F+LY KL+GMTGTA TE EF +++ + +P N P+ R D + + T R
Sbjct: 378 SITFQNYFRLYGKLAGMTGTADTEAYEFQEIYGLETTVIPPNRPSRRDDQLDRVYKTTRE 437
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K+E A +++ G+PVLVG+TS+ENSE + LL ++G+PH VLNA K AREA+ V
Sbjct: 438 KYEAAIKDIRECHERGQPVLVGTTSIENSEIIDQLLNKEGLPHQVLNA--KQHAREADIV 495
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEV 427
AQAGR ITI+TNMAGRGTDI+LGGN + L + D L REA +V
Sbjct: 496 AQAGRAGMITIATNMAGRGTDIVLGGNIEKLIAAVEADEALDAAGREAQIAQV 548
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
++K LGGL +I T HESRRIDNQLRGR+GRQGDPGS+RF +SL D + + F+ D A+
Sbjct: 558 KIKALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLMRIFAGDRVKAI 617
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ + IE + R + Q E F IRK L+E+D+V QRK +Y R
Sbjct: 618 --MDRLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRN 675
Query: 650 SIL 652
IL
Sbjct: 676 DIL 678
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ ER VL++ D WRDHL +++ L +++R + + P +EYK + F ++ +
Sbjct: 772 QFERVVLLQNFDSNWRDHLSSLDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVK 830
>gi|427407489|ref|ZP_18897691.1| protein translocase subunit secA [Sphingobium yanoikuyae ATCC
51230]
gi|425713993|gb|EKU77004.1| protein translocase subunit secA [Sphingobium yanoikuyae ATCC
51230]
Length = 910
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 279/442 (63%), Gaps = 36/442 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA RD
Sbjct: 81 MRHFDVQMIGGIVLHRGEIAEMRTGEGKTLVATLATYLNALEGKGVHVVTVNDYLASRDC 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLGL+ G+I + ++RR Y DITY N+ELGFDYLRDN+ + +V
Sbjct: 141 EWMGQVYRFLGLTTGVIVPNLSEDQRREAYNADITYATNNELGFDYLRDNMKFDRGAMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF+ AIVDEVDS+LIDE R PL+ISG Y + + LV+ Y + K
Sbjct: 201 R---PFNHAIVDEVDSILIDEARTPLIISGPTDDKSELYVAVDAIVKQLVEE-DYEKDEK 256
Query: 158 NNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
++ LTE+G E LE N+L+D EN V AL+A +RRD+ YIV+
Sbjct: 257 QRTITLTEDGTEKIERLLEAAGLLQGNNLYDFENTQVVHHVNQALRAVVMFRRDIDYIVK 316
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +II+E TGR+ + RRWS+G+HQAVEAKEG++I+ ++ +A IT+Q+ F++YPK+SG
Sbjct: 317 DGKVVIIDEFTGRMMDGRRWSDGLHQAVEAKEGVQIEPENQTLASITFQNYFRMYPKISG 376
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF ++++M V+ +PTN P RVD + K+ + ++ G
Sbjct: 377 MTGTASTEATEFYEIYKMNVVTIPTNRPVQRVDEEDTFYKNLEDKFRGIARTIKEHAEKG 436
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+ S+E SE LS+ L Q+G+ H VLNAR + EA VAQAGRK A+TI+TNMA
Sbjct: 437 QPVLVGTVSIEKSEMLSEFLNQEGVKHAVLNAR--FHESEAHIVAQAGRKGAVTIATNMA 494
Query: 391 GRGTDIILGGNPKMLAKKIIED 412
GRGTDI LGGN +M + + D
Sbjct: 495 GRGTDIKLGGNLEMRVEDELRD 516
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
EV E EV GGL V+ T HESRRIDNQLRGR+GRQGDPG +RF +SL D++ +
Sbjct: 531 EVEIEAEKQEVLAAGGLFVLATERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLMRI 590
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F DT +A + S + + E +P + + + Q E + IRK +VE+D+V+ Q
Sbjct: 591 FGPDTMFAKMIRSNLEDGEALP-PSKWLSKAIETAQRKVEARNYDIRKQVVEYDDVMNDQ 649
Query: 641 RKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
RK +Y+ R I+ E+ + V++++ + P +P W +++L
Sbjct: 650 RKVIYEQRSDIMDA--ETVDDVVTDMRHETVNDLVGASCPPGTYPEQWDMERL 700
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
++ + L + A+ QE D +M +E+++++++LD W++HL ++ L V++
Sbjct: 727 MIEERLAGLADAAIAEKTQEVEAADWHM--IEKSIMLQSLDHHWKEHLSTLDALRQVVHL 784
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
R++ + P+ EYK + F ML R S+ +
Sbjct: 785 RAYAQKTPINEYKQEAFALFERMLENIREDVTSSIAR 821
>gi|325963928|ref|YP_004241834.1| protein translocase subunit secA [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470015|gb|ADX73700.1| protein translocase subunit secA [Arthrobacter phenanthrenivorans
Sphe3]
Length = 912
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/431 (48%), Positives = 278/431 (64%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+ +
Sbjct: 80 MRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALAGNGVHVVTVNDYLAEYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+RFLGL+ G I P RR Y DITY N+E GFDYLRDN+A + +LV
Sbjct: 140 DLMGRVYRFLGLTSGCILSNQDPAVRRQQYAADITYGTNNEFGFDYLRDNMAWDKNELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R HFAIVDEVDS+LIDE R PL+ISG A D R Y AKV L Y V+
Sbjct: 200 RG---HHFAIVDEVDSILIDEARTPLIISGPAQGDTNRWYSEFAKVVLRLQPEKDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L +L++ N P F+ NA+KAKE ++RD Y++ +G+ L
Sbjct: 257 KKRTVGVLESGIEKVEDYLGIQNLYESANTPLIGFLNNAIKAKELFKRDKDYVILDGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A +T Q+ F++Y KLSGMTGTA
Sbjct: 317 IVDEHTGRILAGRRYNEGMHQAIEAKEGVEIKAENQTLATVTLQNYFRMYQKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN R+D P F K++ +++ G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVAIPTNRDMQRIDQPDLVFKNETVKFDAVVRDIAERHEKGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LL ++GI H VLNA K AREA VAQAGRK A+T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSRLLAKEGIRHEVLNA--KNHAREAAIVAQAGRKGAVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLA 406
I+LGGN + A
Sbjct: 495 IMLGGNAEFTA 505
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 158/360 (43%), Gaps = 70/360 (19%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ + +E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 529 AALEAAKQAVKDEHEEVLNLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLT 588
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F+ S A + + + +D+ +E + R + Q E RK+++++D
Sbjct: 589 DDLMRLFN---SGAAERLMNSSVPDDVALESKLVSRAIASAQGQVEGRNAEQRKNVLKYD 645
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIF--QYMQAVVDEIIF-GNVDPLKHPRYWSLD 691
+VL QR+ +Y R+ IL G + Q F + A++D GN D W+
Sbjct: 646 DVLNRQREAIYSDRRRILEGDDLHEKVQFFVEDTITALIDAATAEGNGDDWDFNLLWTNL 705
Query: 692 KLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIR 751
K L A +I+++ +G ++E L E D Y
Sbjct: 706 KTLYPVSVTAEEIIEE-----AGGKSRLTVEFLKEELLSDARLVY--------------- 745
Query: 752 RKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
R AI S+ + + R + + RK+ QE Y+ Y+KE
Sbjct: 746 -----QAREEAIGSESMRELERRVVLSVIGRKW-------------QEHLYEMDYLKE-- 785
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ R+PL EY+ +G F SM+ A R +V
Sbjct: 786 ------------------------GIGLRAMAQRDPLVEYQREGFILFQSMMEAIREESV 821
>gi|402574864|ref|YP_006624207.1| protein translocase subunit secA [Desulfosporosinus meridiei DSM
13257]
gi|402256061|gb|AFQ46336.1| protein translocase subunit secA [Desulfosporosinus meridiei DSM
13257]
Length = 834
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/422 (48%), Positives = 280/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG VL+DG IAEM+T V+TVNDYLA+RD+E
Sbjct: 78 RHYDVQLIGGMVLNDGRIAEMRTGEGKTLVATLPAYLNALTGKGVHVITVNDYLARRDSE 137
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M ++++FLGLSVGLI G+ E+RR +Y DITY N+E GFDYLRDN+ E LV R
Sbjct: 138 MMGQIYKFLGLSVGLIVHGLNYEQRRDSYAADITYGTNNEFGFDYLRDNMVTRPEALVQR 197
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
H+AIVDEVDS+LIDE R PL+ISGEA K Y A + L Y + K
Sbjct: 198 H---LHYAIVDEVDSILIDEARTPLIISGEADKPTELYFRVAMIIPRLKNEDDYKIIEKE 254
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
V LTE+G++ E L ++L+++ + A V ALKA ++RD Y+V++G+ +I+
Sbjct: 255 RVVTLTEKGVSRVESMLGVDNLYEDIHTELAHHVNQALKAHMLFKRDRDYVVKDGEVIIV 314
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+SEG+HQA+EAKEG+KI+ +S +A IT+Q+ F++Y KLSGMTGTA T
Sbjct: 315 DEFTGRLMFGRRYSEGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYEKLSGMTGTAMT 374
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE EF K++++ V+E+PTN P +R D + T GK+ +++ G+P+LVG+
Sbjct: 375 EEPEFRKIYKLDVVEIPTNRPLLRKDDSDVIYRTEEGKFLAVVEDIIERHAKGQPLLVGT 434
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SE+LS +L ++G+PH VLNA K+ +EAE VAQAG+ +TI+TNMAGRGTDII
Sbjct: 435 VSVEKSEHLSTMLGRRGVPHQVLNA--KFHEKEAEIVAQAGQAGMVTIATNMAGRGTDII 492
Query: 398 LG 399
LG
Sbjct: 493 LG 494
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 4/168 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL+D++ + F D
Sbjct: 494 GDGVSDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFFISLEDDLMRLFGADNIM 553
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ D+ +PI I R + Q E F IRK ++++D+V+ QR+ +Y
Sbjct: 554 GI--MDKLGMDDSVPITSKMISRSIETAQRRVENRNFEIRKHVLDYDDVMNQQREVIYAQ 611
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
R+++L G E+ I ++ I P W L L++
Sbjct: 612 RRAVLMG--ENLHDNIMDMIEKAASNTITMFSGESTFPEEWDLTSLVE 657
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+EVERAV+++ +D W DHL M+ L + +R++G +NPL EY+ +G F +M+ +
Sbjct: 706 MREVERAVMLQVVDSKWMDHLDAMDMLREGIGLRAYGQKNPLVEYRREGYEMFQAMIES 764
>gi|160914512|ref|ZP_02076727.1| hypothetical protein EUBDOL_00518 [Eubacterium dolichum DSM 3991]
gi|158433670|gb|EDP11959.1| preprotein translocase, SecA subunit [Eubacterium dolichum DSM
3991]
Length = 783
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/431 (47%), Positives = 280/431 (64%), Gaps = 30/431 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+G +HDG IAEM+T VVTVNDYLA RDAEWM
Sbjct: 86 YRVQIMGAVAMHDGDIAEMRTGEGKTLTSTMCIYLNALAGKGVHVVTVNDYLAGRDAEWM 145
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++RFLG+SVG+ R + P E+R+ + CDITYT NSELGFDYLRDN+ + + V+R
Sbjct: 146 GQIYRFLGMSVGVNSRPLSPAEKRAAFACDITYTTNSELGFDYLRDNMVTDIKDRVLRG- 204
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
H AIVDEVDS+LIDE R PL+ISG A K Y A A+ L Q Y ++ K
Sbjct: 205 --LHVAIVDEVDSILIDESRTPLIISGGAKKTANLYLQADAFAKRL-QEDDYEIDEKTKQ 261
Query: 161 VELTEEGIALAEMALETNDLWDENDP-WARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ LTE+G+ AE + ++L+D N + ALKA + +V+Y+V++ + +I+++
Sbjct: 262 IMLTEKGVNNAEAYFKVDNLYDVNHTQLVHHITQALKANYIMKNEVEYVVQDDEVVIVDQ 321
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR R +S+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F+LY KL+GMTGTAKTEE
Sbjct: 322 FTGRTMPGRAYSDGLHQAIEAKEGVSIKEETSTLATITYQNFFRLYDKLAGMTGTAKTEE 381
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EFL ++ M V+E+PTN P +RVD P FA+ K+ EV+ ++ G+PVLVG+ S
Sbjct: 382 EEFLDIYNMRVVEIPTNRPILRVDYPDAIFASPELKYAALVNEVKELYAKGQPVLVGTIS 441
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE+SE + LL ++GIPH VLNA K AREAE +A+AGR ++TI+TNMAGRGTDI L
Sbjct: 442 VESSELVDKLLNKEGIPHEVLNA--KNHAREAEIIAKAGRPKSVTIATNMAGRGTDIKLT 499
Query: 400 GNPKMLAKKII 410
K L ++
Sbjct: 500 EESKALGGLVV 510
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E K LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VSL+DE+ +F D +
Sbjct: 501 ESKALGGLVVLGSERHESRRIDNQLRGRSGRQGDPGYSRFYVSLRDELMIRFGGDKFQKL 560
Query: 590 -DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
D + D IE + + + Q E Y + IRK L+++D+VL QR+ +Y R
Sbjct: 561 FDTLG------DAQIESKMVTKSITQAQKRVEGYNYDIRKQLIDYDDVLRKQREIMYAQR 614
Query: 649 QSILTGANESCSQQIFQYMQAVVDEIIFGNVDP 681
+L NE + + V+ +++ NVD
Sbjct: 615 DYVLE--NEDVHGIVKDMVDRVIRDVVMANVDA 645
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
+Y D + Y +++ R D + + E+ ++++ +D W +H+ M++L + +++RS+
Sbjct: 685 QYCSDRIFTQYDEKIKDVR--DQFT-QFEKTIVLRNMDRNWIEHIDMMDKLRNGIHLRSY 741
Query: 843 GHRNPLEEYKIDGCRFFISM 862
NPL+ Y +G + F M
Sbjct: 742 AQNNPLQAYIEEGYQMFEEM 761
>gi|294791754|ref|ZP_06756902.1| preprotein translocase, SecA subunit [Veillonella sp. 6_1_27]
gi|294793615|ref|ZP_06758752.1| preprotein translocase, SecA subunit [Veillonella sp. 3_1_44]
gi|294455185|gb|EFG23557.1| preprotein translocase, SecA subunit [Veillonella sp. 3_1_44]
gi|294456984|gb|EFG25346.1| preprotein translocase, SecA subunit [Veillonella sp. 6_1_27]
Length = 819
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 278/429 (64%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA RD+
Sbjct: 88 MRHFDVQLMGGICLHNGNIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLATRDS 147
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGLS GLI + +R+ Y CDITY N+E GFDYLRDN+ + Q+V
Sbjct: 148 EQMGRLYNFLGLSTGLIVANLDFNQRKEAYACDITYGTNNEFGFDYLRDNMVTDVVQMVQ 207
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG + Y AK+ L++ Y ++ K
Sbjct: 208 R---PLNYAIVDEVDSILIDEARTPLIISGPGQRSTDNYYKLAKIVPHLIKDEDYVIDEK 264
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ T+ GIA E L +L+D EN + +L+A RD Y+V++G+ +I
Sbjct: 265 QKTIAPTDSGIAKVEKMLGVENLYDAENIELNHLLGASLRAYAMMHRDTDYVVKDGEVVI 324
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK++ +S +A +T+Q+ F++Y KLSGMTGTAK
Sbjct: 325 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASVTFQNYFRMYDKLSGMTGTAK 384
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEEKEF+ ++ + VI +P N P IR+DLP Q F T K+ + ++G+P+L+G
Sbjct: 385 TEEKEFIDIYGLEVIPIPPNKPLIRMDLPDQIFKTKAAKYRAVVRNAVERHQIGQPILIG 444
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LSD+L + G+PH VLNA K+ +EAE VA AG+ +TI+TNMAGRGTDI
Sbjct: 445 TTSITQSEELSDMLLRAGVPHKVLNA--KHHEQEAEIVAAAGQMGMVTIATNMAGRGTDI 502
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 503 TLGEGVPEL 511
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 67/347 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 505 GEGVPELGGLAILGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRIFGADNIT 564
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I + + Q E + + IRK ++E+D+V+ QR+ +Y+
Sbjct: 565 GI--MDKLGMEEDEPIEHSLITKSIERAQKKVEDHNYNIRKYVLEYDDVMNQQREVLYEQ 622
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL NES + I + + +V E + D +P W + L K L
Sbjct: 623 RRRILR--NESLRETINEMIDKLVTESVDAYADEKLYPEEWDYEGLYKH--------LSQ 672
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F EE+ ++S D+ + DL L+R L I ++
Sbjct: 673 YFL----------TEEI--MSSQDMEEYSRQDL----------------LERLLEIAHEE 704
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
Y+ ++ LG+ + + ++E+A++++ +D W +HL
Sbjct: 705 ------YQDRVDM----LGEAMFS-----------------QLEKAIMLRVVDNKWMEHL 737
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
NM+ L + +R++G +NPL EYK + F +M++A + T+ +L
Sbjct: 738 DNMDMLREGIGLRAYGQKNPLVEYKFEAFDMFQNMIAAIQDETIMAL 784
>gi|357030725|ref|ZP_09092669.1| preprotein translocase subunit SecA [Gluconobacter morbifer G707]
gi|356415419|gb|EHH69062.1| preprotein translocase subunit SecA [Gluconobacter morbifer G707]
Length = 924
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 286/442 (64%), Gaps = 38/442 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 90 RHFDVQLIGGMVLHAGRIAEMRTGEGKTLVGTLPVYLNALAGKGVHVVTVNDYLARRDAE 149
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLGL+ G+I + +ERR Y DITY N+E GFDYLRDN+ + ++V R
Sbjct: 150 EMAQLYSFLGLTTGVIVPNLSDDERREAYASDITYGTNNEFGFDYLRDNMKYSLAEMVQR 209
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEA--SKDVARYPVAAKVAELLVQGLHYTVEL 156
PF FAIVDEVDS+LIDE R PL+ISG A S D+ R V A VA+L+ + + +
Sbjct: 210 ---PFSFAIVDEVDSILIDEARTPLIISGPADDSSDLYR-SVDAVVAKLVQEPDVFDKDE 265
Query: 157 KNNSVELTEEGIALAEM------ALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K +V LTE G E L+ L+D N V +L+A + RDV YIV
Sbjct: 266 KLRTVTLTEHGSDRVEQLLHEAGVLQEGGLYDIHNVAVVHHVQQSLRAHTLFTRDVDYIV 325
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
R+GK +II+E TGR+ + RR+S+G+HQA+EAKE ++IQ ++ +A IT+Q+ F+LYPKL+
Sbjct: 326 RDGKVVIIDEFTGRMMDGRRYSDGLHQALEAKEHVEIQQENQTLASITFQNYFRLYPKLA 385
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE EF +++ + V+E+PTNLP R+D + + TA K+ ++ + +
Sbjct: 386 GMTGTAMTEADEFAEIYNLEVVEIPTNLPVRRIDTDDEVYLTAAEKYNAVADLIQDIHKT 445
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 389
+P+LVG+TS+E SEYLS LL Q+GIPHNVLNAR + REA VAQAG AITI+TNM
Sbjct: 446 KQPILVGTTSIEKSEYLSHLLTQRGIPHNVLNAR--HHEREAIIVAQAGAPGAITIATNM 503
Query: 390 AGRGTDIILGGNPKMLAKKIIE 411
AGRGTDI LGGN +ML K E
Sbjct: 504 AGRGTDIKLGGNVEMLVKANTE 525
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 14/172 (8%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV++ GGL+VIGT HESRR+DNQLRGR+GRQGDPG++RF +SL+D++ + F+ D A
Sbjct: 550 EVQKAGGLYVIGTERHESRRVDNQLRGRSGRQGDPGNSRFFLSLEDDLIRIFANDRMGA- 608
Query: 590 DLISRITNDEDMPIEGDAIV-----RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHV 644
++ ++ EG+AIV + L Q E F +RK+ +++D+V+ QRK V
Sbjct: 609 -MMQKMGLK-----EGEAIVHPWLNKALEKAQKRVEARNFDMRKNTLKYDDVMNDQRKEV 662
Query: 645 YDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
Y R+ + A++ S + + +++++ ++ W + L KE
Sbjct: 663 YAQRREYM--ASDDLSGVVAELRVHTIEDLVHAHIPEKSFAEAWDTEGLTKE 712
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +E+ V++ + D W++HL +++L + +R++G R+PL EYK + + F +ML
Sbjct: 761 MRLIEKQVVLTSFDAVWKEHLHALDQLRQGIGLRAYGQRDPLNEYKQEAFQMFTAMLDDM 820
Query: 867 RRLTVESL--VQYWSSP 881
R E++ +Q S P
Sbjct: 821 RLRVTETMCRIQAVSEP 837
>gi|227486640|ref|ZP_03916956.1| IISP family type II (general) secretory pathway protein SecA
[Anaerococcus lactolyticus ATCC 51172]
gi|227235352|gb|EEI85367.1| IISP family type II (general) secretory pathway protein SecA
[Anaerococcus lactolyticus ATCC 51172]
Length = 917
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/473 (45%), Positives = 289/473 (61%), Gaps = 54/473 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
++H+ VQ++GG VLH+G IAEMKT VVTVNDYLA+RD
Sbjct: 86 IKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVATLPSYLNALSGKGVHVVTVNDYLAKRDQ 145
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH +LGLSVG I G+ ERR NY DITY N++ GFDYLRDN+ E +V
Sbjct: 146 EWMGKVHTWLGLSVGCIIYGLTNSERRENYNADITYGTNNQFGFDYLRDNMVIYKEDMVQ 205
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AIVDEVDS+LIDE R PL+ISG+ + Y A + + L
Sbjct: 206 RG---LNYAIVDEVDSILIDEARTPLIISGQGDESTDTYQKANEFIQTLEGRILDPNEDA 262
Query: 147 ----------VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNAL 195
V+ + + V+ K S LTE+G AE +L D EN + ++ NAL
Sbjct: 263 DIDPFDREFKVEDVDFLVDEKRKSSNLTEKGTKKAEEFFGIENLSDTENLELSHYINNAL 322
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
KA RD+ Y+V +G+ I++E TGR+ + RR+S+G+HQA+EAKEG++++A+S +A
Sbjct: 323 KANTTMTRDIDYVVNHGEVEIVDEFTGRIMQGRRFSDGLHQAIEAKEGVEVKAESKTLAT 382
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KLSGMTGTAKTEE EF +++++ V+E+PTN P R+D + RGK
Sbjct: 383 ITFQNYFRMYAKLSGMTGTAKTEEDEFDEIYKLDVVEIPTNRPVQRIDDNDHVYINERGK 442
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ E+ + G+P+LVG+ S+E SE LS LKQ GI H VLNA K REAE VA
Sbjct: 443 FNAIINEINEVHATGQPILVGTISIEASERLSAALKQAGISHTVLNA--KNHEREAEIVA 500
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVD 428
QAGR A+TI+TNMAGRGTDI LGGN +AK+ +L T E L EVD
Sbjct: 501 QAGRLGAVTIATNMAGRGTDITLGGNVDFMAKQ----KLRREGTSEELIEEVD 549
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 18/206 (8%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E ++V GGL++IG+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + +
Sbjct: 580 EEAKVIAAGGLYIIGSERHESRRIDNQLRGRSGRQGDPGKSRFFISLEDDLIR---LNGG 636
Query: 587 WAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
AV + + DE+ PI + R + Q E F RK ++++D+V+ QR +Y
Sbjct: 637 EAVAKFVQKADFDENEPIVSRMVTRSIEKAQTRVEANNFATRKRVLQYDDVMNKQRTIIY 696
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK---------- 695
+ R+ +L G + + I ++ V+ + ++ +P P W + LL
Sbjct: 697 NERREVLMG--QDMKETIIDMIKQVIKDAVYTFTNPEVKPENWEMTALLNYLNGLGVPVT 754
Query: 696 --EFIAIAGKILDDLFAGISGDTLLK 719
F I DDL ++G TL K
Sbjct: 755 QLHFENINSYTQDDLIEYVTGATLAK 780
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T + L +Y+ +A Y + +E+ + M+EVER +L++ +D W DH+ M+++
Sbjct: 765 TQDDLIEYVTGATLAKYED--KEASFGPDNMREVERVILLRVIDQKWMDHIDAMDQMRKE 822
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
+ VR+ G +P+ Y +G + M A TV ++
Sbjct: 823 IGVRAMGQEDPVRAYTNEGFDMYEEMTRAILEDTVRYMM 861
>gi|417971987|ref|ZP_12612903.1| preprotein translocase subunit SecA [Corynebacterium glutamicum
S9114]
gi|344043741|gb|EGV39429.1| preprotein translocase subunit SecA [Corynebacterium glutamicum
S9114]
Length = 845
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/428 (47%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYRVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ RVHR+LGL VG+I M P+ERR Y DITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 MVGRVHRYLGLEVGVILSDMRPDERRKAYTADITYGTNNELGFDYLRDNMARSLSDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVDGTSQFYNVFAQIVPRMTKDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 KTVGVKEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKERVEIKNENQTLATVTLQNYFRLYTKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R DL + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNQIYKLDVIAIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIAERTEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 VSVERSEYLSQLLTKRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEIL 502
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C G +V+ GGL+V+GT HESRRIDNQLRGR+ RQGDPGSTRF +S++D++ +F
Sbjct: 536 CEERGDKVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGSTRFYLSMRDDLMVRFVG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 596 PTME--NMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R+ IL A+ I +Y+Q +++E + VD Y W LDKL
Sbjct: 654 IYSERREILESAD------ISRYIQNMIEETVSAYVDGATANGYVEDWDLDKL 700
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
+V ++ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 759 EVQIRNIERMVLMPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMK 818
Query: 864 SATRRLTVESL 874
+ TV L
Sbjct: 819 DGIKEETVRQL 829
>gi|145294922|ref|YP_001137743.1| preprotein translocase subunit SecA [Corynebacterium glutamicum R]
gi|167016609|sp|A4QC94.1|SECA1_CORGB RecName: Full=Protein translocase subunit SecA 1
gi|140844842|dbj|BAF53841.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 845
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/428 (47%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYRVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ RVHR+LGL VG+I M P+ERR Y DITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 MVGRVHRYLGLEVGVILSDMRPDERRKAYTADITYGTNNELGFDYLRDNMARSLSDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVDGTSQFYNVFAQIVPRMTKDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 KTVGVKEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKERVEIKNENQTLATVTLQNYFRLYTKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R DL + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNQIYKLDVIAIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIAERTEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 VSVERSEYLSQLLTKRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEIL 502
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C G +V+ GGL+V+GT HESRRIDNQLRGR+ RQGDPGSTRF +S++D++ +F
Sbjct: 536 CEERGDKVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGSTRFYLSMRDDLMVRFVG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 596 PTME--NMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R+ IL A+ I +Y+Q +++E + VD Y W LDKL
Sbjct: 654 IYSERREILESAD------ISRYIQNMIEETVSAYVDGATANGYVEDWDLDKL 700
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 762 IRNIERMVLMPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|116671252|ref|YP_832185.1| preprotein translocase subunit SecA [Arthrobacter sp. FB24]
gi|166918851|sp|A0JYG5.1|SECA_ARTS2 RecName: Full=Protein translocase subunit SecA
gi|116611361|gb|ABK04085.1| protein translocase subunit secA [Arthrobacter sp. FB24]
Length = 912
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/431 (48%), Positives = 279/431 (64%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA LH G+IAEMKT V+TVNDYLA+ +
Sbjct: 80 MRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNALTGNGVHVITVNDYLAEYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+RFLGL+ G I P RR Y DITY N+E GFDYLRDN+A + +LV
Sbjct: 140 DLMGRVYRFLGLTSGCILSNQDPAVRREQYAADITYGTNNEFGFDYLRDNMAWDKSELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R HFAIVDEVDS+LIDE R PL+ISG A D R Y AKV L Y V+
Sbjct: 200 RG---HHFAIVDEVDSILIDEARTPLIISGPAQGDTNRWYSEFAKVVTRLKPDEDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y++ +G+ L
Sbjct: 257 KKRTVGVLEGGIEKVEDYLGIHNLYESANTPLIGFLNNAIKAKELFKRDKDYVILDGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A +T Q+ F++Y KLSGMTGTA
Sbjct: 317 IVDEHTGRILAGRRYNEGMHQAIEAKEGVEIKAENQTLATVTLQNYFRMYNKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN R+D P + K++ +++ G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVAIPTNRDMQRIDQPDLVYKNEAVKFDAVVKDIAERHEKGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LL ++GI H VLNA K AREA VAQAGRK A+T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSRLLAKEGIRHEVLNA--KNHAREAAIVAQAGRKGAVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLA 406
I+LGGN + A
Sbjct: 495 IMLGGNAEFTA 505
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 3/141 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F+
Sbjct: 538 VKDEHEEVLELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTDDLMRLFN- 596
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
S A + + + +D+ +E + R + Q E RK+++++D+VL QR+
Sbjct: 597 --SGAAERLMNSSVPDDVALESKLVSRAIASAQGQVEGRNAEQRKNVLKYDDVLNRQREA 654
Query: 644 VYDLRQSILTGANESCSQQIF 664
+Y R+ IL G + Q F
Sbjct: 655 IYGDRRRILEGDDLHEKVQFF 675
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 761 LAICSDDLTK--NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKT 818
+++ S D+ G+ R T + L++ + + A + +E M+E+ER V++
Sbjct: 711 VSVTSHDVIDEAGGKSRITVDFLKEEI--LSDARLVYQAREQAIGSESMRELERRVVLSV 768
Query: 819 LDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ W++HL M+ L + +R+ R+PL EY+ +G F +M+ A R +V
Sbjct: 769 IGRKWQEHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFIMFQAMMEAIREESV 821
>gi|443626994|ref|ZP_21111397.1| putative protein translocase subunit SecA [Streptomyces
viridochromogenes Tue57]
gi|443339481|gb|ELS53720.1| putative protein translocase subunit SecA [Streptomyces
viridochromogenes Tue57]
Length = 939
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 287/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGEGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLSVGCILANMTPAQRREQYNCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLKRGEAGNPLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G++ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYDVDEKKRTVAIHEAGVSKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P IR D + T K++ ++
Sbjct: 377 SKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNKPMIRKDQSDLIYRTEVAKFDAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP+ LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPEDLAEAELRQRGL 524
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EV+ LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEAAVKAEKEEVESLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +Q+ +M +D + W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLHEQVQHFMDDTIDAYVAAET-AEGFAEEWDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WGAF 716
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|313893722|ref|ZP_07827289.1| preprotein translocase, SecA subunit [Veillonella sp. oral taxon
158 str. F0412]
gi|313441736|gb|EFR60161.1| preprotein translocase, SecA subunit [Veillonella sp. oral taxon
158 str. F0412]
Length = 811
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 279/429 (65%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA RD+
Sbjct: 80 MRHFDVQLMGGICLHNGNIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLATRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGLS GLI + +RR Y CDITY N+E GFDYLRDN+ ++ Q+V
Sbjct: 140 EQMGRLYNFLGLSTGLIVANLDFNQRREAYACDITYGTNNEFGFDYLRDNMVSDVLQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG + Y AK+ LV+ Y ++ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGQRSTDNYYKLAKIVPHLVRDEDYIIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ T+ GI E L +L+D EN + +L+A RD Y+V++G+ +I
Sbjct: 257 QKTIAPTDSGIEKVEKMLGVENLYDAENIELNHLLGASLRAYAMMHRDTDYVVKDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK++ +S +A +T+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASVTFQNYFRMYEKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEEKEF+ ++ + VI +P N P IR+DLP Q F T K+ + ++G+P+L+G
Sbjct: 377 TEEKEFIDIYGLEVIPIPPNKPLIRIDLPDQIFKTKAAKYRAVVRNAVERHKVGQPLLIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LSD+L + G+PH+VLNA K+ +EAE VA AG+ +TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEELSDMLLRAGVPHSVLNA--KHHEKEAEIVANAGQMGMVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 495 TLGEGVPEL 503
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 67/347 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGR+GRQGDPGS++F +SL+D++ + F D
Sbjct: 497 GEGVPELGGLAILGTERHESRRIDNQLRGRSGRQGDPGSSQFFLSLEDDLMRIFGADNIT 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I + + Q E + + IRK ++E+D+V+ QR+ +Y+
Sbjct: 557 GI--MDKLGMEEDEPIEHSLITKSIERAQKKVEDHNYNIRKYVLEYDDVMNQQREVLYEQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL NES + I + + +V + + D +P W + L K
Sbjct: 615 RRRILR--NESLRETINEMIDKLVTDSVDAYADEKLYPEEWDYEGLYKHLSQY------- 665
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F ++ P ++ R++ L+R L I ++
Sbjct: 666 ---------------------------FLTEEIMTPQDMEEYTRQE--LLERLLEIAHEE 696
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
Y+ N+ LG+ + + + D+ +M+ ++
Sbjct: 697 ------YQDRVNM----LGEAMFSQLEKAIMLRVVDNKWMEHLD---------------- 730
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
NM+ L + +R++G +NPL EYK + F +M++A + T+ +L
Sbjct: 731 -NMDMLREGIGLRAYGQKNPLVEYKFEAFEMFQNMIAAIQDETIMAL 776
>gi|163840376|ref|YP_001624781.1| preprotein translocase subunit SecA [Renibacterium salmoninarum
ATCC 33209]
gi|189046175|sp|A9WMN9.1|SECA_RENSM RecName: Full=Protein translocase subunit SecA
gi|162953852|gb|ABY23367.1| protein translocase, SecA subunit [Renibacterium salmoninarum ATCC
33209]
Length = 932
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/431 (49%), Positives = 280/431 (64%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ++GGA LH G+IAEMKT +VT NDYLA +
Sbjct: 80 MRQFDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNGLSGKGVHIVTTNDYLASYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RVHRF+GL+ G I P ERR Y D+TY N+E GFDYLRDN+A +SE+LV
Sbjct: 140 ELMGRVHRFMGLTSGCILSAQEPSERRLQYAADVTYGTNNEFGFDYLRDNMAWSSEELVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R HFAIVDEVDS+LIDE R PL+ISG AS D R Y AKV L Y V+
Sbjct: 200 RG---HHFAIVDEVDSILIDEARTPLIISGPASGDANRWYGEFAKVVLRLDVDDDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y++ +G+ L
Sbjct: 257 KKRTVGVLEPGIEKVEDYLGISNLYESANTPLIGFLNNAIKAKELFKRDKDYVILDGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EG+HQA+EAKE ++I+A++ +A +T Q+ F+LY KLSGMTGTA
Sbjct: 317 IVDEHTGRILAGRRYNEGMHQAIEAKESVEIKAENQTLATVTLQNYFRLYEKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN P +R+D + K+E +++E + G+PVLV
Sbjct: 377 ETEASEFMGTYELGVVAIPTNKPMVRIDQSDLVYKNEVVKFEAVVKDIEERHKEGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS L + GI H VLNA K AREA VAQAGRK A+T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSKQLSKLGIKHEVLNA--KNHAREASIVAQAGRKGAVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLA 406
I+LGGN + A
Sbjct: 495 IMLGGNAEFNA 505
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 73/358 (20%)
Query: 534 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLIS 593
LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F++ A L+
Sbjct: 548 LGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTDDLMR--LFNSGAAERLMG 605
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
R +D +E + + + Q E RK+++++D+VL QR+ +Y R+ IL
Sbjct: 606 RSVMPDDQALESKLVSKAIASAQGQVEGRNAEQRKNVLKYDDVLNRQREAIYGDRRRILE 665
Query: 654 GANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFA-GI 712
G + +++ +++ V+E I H W L L L+ G+
Sbjct: 666 G--DDLHEKVQHFLEDTVNESIDATTAE-GHAEGWDYKALWSS--------LGTLYPIGL 714
Query: 713 SGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD-DLTKN 771
+ D + + + L + S D+ LKR I SD L
Sbjct: 715 TADDVAEEVGGLANVTS-DV------------------------LKR--EILSDAKLAYQ 747
Query: 772 GR-YRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
GR + + +R+ ++++ QE Y+ Y+KE
Sbjct: 748 GREEKLGSETIRELERRVVLSVIGRKWQEHLYEMDYLKE--------------------- 786
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL----VQYWSSPMES 884
+ +R+ R+PL EY+ +G F +M+ A R +V L VQ +P S
Sbjct: 787 -----GIGLRAMAQRDPLVEYQREGFVMFQAMMGAIREESVGFLFNLEVQVEEAPAAS 839
>gi|383454222|ref|YP_005368211.1| preprotein translocase subunit SecA [Corallococcus coralloides DSM
2259]
gi|380734316|gb|AFE10318.1| preprotein translocase subunit SecA [Corallococcus coralloides DSM
2259]
Length = 940
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/430 (46%), Positives = 280/430 (65%), Gaps = 29/430 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ+IGG LH+G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHYDVQLIGGMFLHEGCIAEMRTGEGKTLTATLPSYLNALSGRGVHVVTVNDYLARRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV++FLG++ G + + ++R+ YR DITY N+E GFDYLRDN+ + V R
Sbjct: 142 WMGRVYKFLGMTTGCVLHELSDKQRQEAYRSDITYGQNNEFGFDYLRDNMKFRLQDYVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG +Y +V LV YT++ K+
Sbjct: 202 ---ELNYAIVDEVDSILIDEARTPLIISGPTEDSTDKYYRVDQVIPGLVPDQDYTLDEKH 258
Query: 159 NSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LT++GI + L +L+D + V AL+A Y+RD Y+V++G+ I+
Sbjct: 259 RSVALTDDGIDKLQKRLNVGNLYDPGEIETLHHVEQALRAHTLYKRDKDYVVKDGEVQIV 318
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ + RRWS+G+HQA+EAKEG+KI+ ++ +A +++Q+ F++Y KLSGMTGTA T
Sbjct: 319 DEFTGRLMQGRRWSDGLHQAIEAKEGVKIENENQTLATVSFQNYFRMYSKLSGMTGTADT 378
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E +EF K++ + V +PTN P R D + T R K+E ++E + + G+PVLVG+
Sbjct: 379 EAEEFAKIYNLDVRVIPTNRPPQRRDDQDVVYKTEREKFEAVAAQIEELHKAGQPVLVGT 438
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ SE +S+ LK++G+ HNVLNA K REA+ VAQAGRK A+TISTNMAGRGTDI+
Sbjct: 439 VSIAKSEVVSNFLKKRGVAHNVLNA--KAHQREADIVAQAGRKGAVTISTNMAGRGTDIL 496
Query: 398 LGGNPKMLAK 407
LGGN +++ K
Sbjct: 497 LGGNAEVMTK 506
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
+ +V + E E EV GGL +IGT HESRR+DNQLRGRAGRQGDPG++RF +S
Sbjct: 540 FATVKANNEELTKREREEVMAAGGLFIIGTERHESRRVDNQLRGRAGRQGDPGASRFFLS 599
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + L+ R+ +E IE + R + Q E + F IRK+L+E
Sbjct: 600 LEDDLMRIFGSERIQM--LMERLGMEEGEVIEHVWLSRAIESAQKRVEGHNFDIRKNLLE 657
Query: 633 FDEVLEVQRKHVYDLRQSIL 652
+D+V+ QR+ +Y LR+ +L
Sbjct: 658 YDDVMNQQRRTIYKLRRQVL 677
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 796 VVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDG 855
+E + + +M+ ++ L T+D W+DHL+ M+ L + +R +G ++P +EYK +G
Sbjct: 778 TAREQEFGEDFMRFLQYRYLA-TIDQLWKDHLLAMDHLRQGIGLRGYGQKDPKQEYKKEG 836
Query: 856 CRFFISMLSATRRLTVESL--VQYWSSPMESQE 886
FI ML A + V + VQ S+ ++E
Sbjct: 837 YSGFIQMLGAIKTQFVSQMMRVQARSASNAAEE 869
>gi|168213725|ref|ZP_02639350.1| preprotein translocase, SecA subunit [Clostridium perfringens CPE
str. F4969]
gi|170714800|gb|EDT26982.1| preprotein translocase, SecA subunit [Clostridium perfringens CPE
str. F4969]
Length = 840
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGTVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ R G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQREDHSDLVFKTAKGKYDAIVEEIIETHRTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++G+PH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGVPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 AV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA++++++ V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVVTSAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS---LKRWLAIC 764
F GD L+K Y D+ P F K+SS + R C
Sbjct: 650 DFEKELGD-LIK----------------YLEDIMLPHGKFTVEELKTSSNEEITRKFIEC 692
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+ ++ K +E M+E+ER ++++ +D W
Sbjct: 693 AREIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWM 726
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
DH+ +M+ L + +R++ ++P + Y+++G F M++ + TV L
Sbjct: 727 DHIDDMDHLKQGIGLRAYKQQDPTQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|7262395|dbj|BAA92789.1| SecA protein [Corynebacterium glutamicum]
Length = 845
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/428 (47%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYRVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ RVHR+LGL VG+I M P+ERR Y DITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 MVGRVHRYLGLEVGVILSDMRPDERRKAYTADITYGTNNELGFDYLRDNMARSLSDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVDGTSQFYNVFAQIVPRMTKDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 KTVGVKEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKERVEIKNENQTLATVTLQNYFRLYTKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R DL + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNQIYKLDVIAIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIAERTEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 VSVERSEYLSQLLTKRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEIL 502
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C G +V+ GGL+V+GT HESRRIDNQLRGR+ RQGDPGSTRF +S++D++ +F
Sbjct: 536 CEERGDKVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGSTRFYLSMRDDLMVRFVG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 596 PTME--NMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R+ IL A+ I +Y+Q +++E + VD Y W LDKL
Sbjct: 654 IYSERREILESAD------ISRYIQNMIEETVSAYVDGATANGYVEDWDLDKL 700
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 762 IRNIERMVLMPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|418246665|ref|ZP_12873059.1| preprotein translocase subunit SecA [Corynebacterium glutamicum
ATCC 14067]
gi|354509280|gb|EHE82215.1| preprotein translocase subunit SecA [Corynebacterium glutamicum
ATCC 14067]
Length = 845
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/428 (47%), Positives = 282/428 (65%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQI+GGA LH G++AEM+T VVTVNDYLA+RDAE
Sbjct: 80 KHYRVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
+ RVHR+LGL VG+I M P+ERR Y DITY N+ELGFDYLRDN+A + LV R
Sbjct: 140 MVGRVHRYLGLEVGVILSDMRPDERRKAYTADITYGTNNELGFDYLRDNMARSLSDLVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG Y V A++ + + +HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVDGTSQFYNVFAQIVPRMTKDVHYEVDERK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+V + EEG+ E L ++L+ E+ ++ NA+KA+E + RD YIVRNG+ +I+
Sbjct: 257 KTVGVKEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DGFTGRVLAGRRYNEGMHQAIEAKERVEIKNENQTLATVTLQNYFRLYTKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++++ VI +PTN PN R DL + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELNQIYKLDVIAIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIAERTEKGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
SVE SEYLS LL ++GI HNVLNA K+ +EA+ VAQAG A+T++TNMAGRGTDI+
Sbjct: 437 VSVERSEYLSQLLTKRGIKHNVLNA--KHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEIL 502
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C G +V+ GGL+V+GT HESRRIDNQLRGR+ RQGDPGSTRF +S++D++ +F
Sbjct: 536 CEERGDKVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGSTRFYLSMRDDLMVRFVG 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
T ++++R+ +D+PIE + + G Q E F +RK+++++DEV+ QRK
Sbjct: 596 PTME--NMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKV 653
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKL 693
+Y R+ IL A+ I +Y+Q +++E + VD Y W LDKL
Sbjct: 654 IYSERREILESAD------ISRYIQNMIEETVSAYVDGATANGYVEDWDLDKL 700
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++ +ER VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M
Sbjct: 762 IRNIERMVLMPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMKDGI 821
Query: 867 RRLTVESL 874
+ TV L
Sbjct: 822 KEETVRQL 829
>gi|411005062|ref|ZP_11381391.1| preprotein translocase subunit SecA [Streptomyces globisporus
C-1027]
Length = 938
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA RD+E
Sbjct: 80 RHYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLATRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHKFLGLSVGCIVANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F +
Sbjct: 551 EFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDDLMRLFK---A 607
Query: 587 WAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
V+ + + N +D+PIE + R + Q E+ F RK+++++DEVL QR+ +Y
Sbjct: 608 QMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYDEVLNRQREVIY 667
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G E +QI +M +D+ I W LD+L F
Sbjct: 668 GERRRVLEG--EDLQEQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRLWGAF 716
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|374851283|dbj|BAL54248.1| preprotein translocase subunit SecA [uncultured candidate division
OP1 bacterium]
Length = 787
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT----------------------VVTVNDYLAQRDAE 38
+R FDVQ+IGG V+H IAEMKT +VTVNDYLA+RD E
Sbjct: 18 LRPFDVQLIGGIVIHKAKIAEMKTGEGKTLVATMPAYLNALVGKVHIVTVNDYLAKRDRE 77
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++ LGL VGL+Q EER+ Y+CDI Y N++ GFDYLRDNL + +Q R
Sbjct: 78 WMGPIYEALGLKVGLLQETSTQEERKQAYQCDIIYGTNTQFGFDYLRDNLVISRDQ---R 134
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDE+D++LIDE R PL+ISG S+ + Y A +A +G+ + ++ K
Sbjct: 135 VQTGLDFAIVDEIDNILIDEARTPLIISGSTSETIKLYKKFAAIAPRFQKGIDFEIDEKA 194
Query: 159 NSVELT-EEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V LT E G+ AE L+ ++L+ E+ + + AL+A Y+R+ YIV++G+ +I
Sbjct: 195 RRVHLTPEAGVKKAEEILKIDNLYAPEHVDLLKHLETALRALHLYKRERDYIVKDGRVII 254
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQA+EAKEGL+I+ + +A IT Q FKLY KL+GMTGTAK
Sbjct: 255 VDEFTGRLMPDRRWSDGLHQAIEAKEGLEIRKEQQTLATITLQHYFKLYKKLAGMTGTAK 314
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++ + V+ +PT+ P IR DLP + F T + K+ +EV + +GRPVL+G
Sbjct: 315 TEEEEFQQIYGLSVVVIPTHKPMIRQDLPDKLFTTEKAKFNAIVEEVYRLHEIGRPVLIG 374
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LL ++G+PHNVLNA K+ REAE + AG+K AIT++TNMAGRG DI
Sbjct: 375 TTSIEKSEYLSTLLSRRGLPHNVLNA--KHHEREAEIIKDAGQKGAITVATNMAGRGVDI 432
Query: 397 ILG 399
LG
Sbjct: 433 KLG 435
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IG HESRRID+QLRGRAGRQGDPGS++F VSL+D++ + F D+
Sbjct: 435 GPGVAELGGLHIIGAQRHESRRIDDQLRGRAGRQGDPGSSQFYVSLEDDLIRLFG-DSK- 492
Query: 588 AVDLISRITND--EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
L+S + E +E + + + Q E +YFGIRK L+E+D+V+ QR+ +Y
Sbjct: 493 ---LLSFVKKGMAEGEALEHPMLTKAIRNAQKRVEIHYFGIRKRLIEYDQVMARQREAIY 549
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK-----LLKEFIAI 700
LR+ L G +S S++ Q + + +I G D L RY + + L KE
Sbjct: 550 SLRERFLIGGEQS-SEESAQDLDEYLTGLIEGYTDTLI-ARYLAGAERDDAGLHKELAGF 607
Query: 701 AGKILDDLFAGISGD 715
LD AG+S D
Sbjct: 608 QNAPLDFTVAGLSTD 622
>gi|374857424|dbj|BAL60277.1| preprotein translocase subunit SecA [uncultured candidate division
OP1 bacterium]
Length = 852
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 277/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT----------------------VVTVNDYLAQRDAE 38
+R FDVQ+IGG V+H IAEMKT +VTVNDYLA+RD E
Sbjct: 83 LRPFDVQLIGGIVIHKAKIAEMKTGEGKTLVATMPAYLNALVGKVHIVTVNDYLAKRDRE 142
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM ++ LGL VGL+Q EER+ Y+CDI Y N++ GFDYLRDNL + +Q R
Sbjct: 143 WMGPIYEALGLKVGLLQETSTQEERKQAYQCDIIYGTNTQFGFDYLRDNLVISRDQ---R 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
FAIVDE+D++LIDE R PL+ISG S+ + Y A +A +G+ + ++ K
Sbjct: 200 VQTGLDFAIVDEIDNILIDEARTPLIISGSTSETIKLYKKFAAIAPRFQKGIDFEIDEKA 259
Query: 159 NSVELT-EEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V LT E G+ AE L+ ++L+ E+ + + AL+A Y+R+ YIV++G+ +I
Sbjct: 260 RRVHLTPEAGVKKAEEILKIDNLYAPEHVDLLKHLETALRALHLYKRERDYIVKDGRVII 319
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RRWS+G+HQA+EAKEGL+I+ + +A IT Q FKLY KL+GMTGTAK
Sbjct: 320 VDEFTGRLMPDRRWSDGLHQAIEAKEGLEIRKEQQTLATITLQHYFKLYKKLAGMTGTAK 379
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF +++ + V+ +PT+ P IR DLP + F T + K+ +EV + +GRPVL+G
Sbjct: 380 TEEEEFQQIYGLSVVVIPTHKPMIRQDLPDKLFTTEKAKFNAIVEEVYRLHEIGRPVLIG 439
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LL ++G+PHNVLNA K+ REAE + AG+K AIT++TNMAGRG DI
Sbjct: 440 TTSIEKSEYLSTLLSRRGLPHNVLNA--KHHEREAEIIKDAGQKGAITVATNMAGRGVDI 497
Query: 397 ILG 399
LG
Sbjct: 498 KLG 500
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IG HESRRID+QLRGRAGRQGDPGS++F VSL+D++ + F D+
Sbjct: 500 GPGVAELGGLHIIGAQRHESRRIDDQLRGRAGRQGDPGSSQFYVSLEDDLIRLFG-DSK- 557
Query: 588 AVDLISRITND--EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
L+S + E +E + + + Q E +YFGIRK L+E+D+V+ QR+ +Y
Sbjct: 558 ---LLSFVKKGMAEGEALEHPMLTKAIRNAQKRVEIHYFGIRKRLIEYDQVMARQREAIY 614
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK-----LLKEFIAI 700
LR+ L G +S S++ Q + + +I G D L RY + + L KE
Sbjct: 615 SLRERFLIGGEQS-SEESAQDLDEYLTGLIEGYTDTLI-ARYLAGAERDDAGLHKELAGF 672
Query: 701 AGKILDDLFAGISGD 715
LD AG+S D
Sbjct: 673 QNAPLDFTVAGLSTD 687
>gi|269797861|ref|YP_003311761.1| preprotein translocase subunit SecA [Veillonella parvula DSM 2008]
gi|269094490|gb|ACZ24481.1| preprotein translocase, SecA subunit [Veillonella parvula DSM 2008]
Length = 811
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/429 (46%), Positives = 278/429 (64%), Gaps = 30/429 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G+IAEM+T VVTVNDYLA RD+
Sbjct: 80 MRHFDVQLMGGICLHNGNIAEMRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLATRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGLS GLI + +R+ Y CDITY N+E GFDYLRDN+ + Q+V
Sbjct: 140 EQMGRLYNFLGLSTGLIVANLDFNQRKEAYACDITYGTNNEFGFDYLRDNMVTDVVQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P ++AIVDEVDS+LIDE R PL+ISG + Y AK+ L++ Y ++ K
Sbjct: 200 R---PLNYAIVDEVDSILIDEARTPLIISGPGQRSTDNYYKLAKIVPHLIKDEDYVIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ T+ GIA E L +L+D EN + +L+A RD Y+V++G+ +I
Sbjct: 257 QKTIAPTDSGIAKVEKMLGVENLYDAENIELNHLLGASLRAYAMMHRDTDYVVKDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEGLK++ +S +A +T+Q+ F++Y KL+GMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASVTFQNYFRMYDKLAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEEKEF+ ++ + VI +P N P IR+DLP Q F T K+ + ++G+P+L+G
Sbjct: 377 TEEKEFIDIYGLEVIPIPPNKPLIRMDLPDQIFKTKAAKYRAVVRNAVERHQIGQPILIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE LSD+L + G+PH VLNA K+ +EAE VA AG+ +TI+TNMAGRGTDI
Sbjct: 437 TTSITQSEELSDMLLRAGVPHKVLNA--KHHEQEAEIVAAAGQMGMVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKM 404
LG G P++
Sbjct: 495 TLGEGVPEL 503
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 67/347 (19%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL ++GT HESRRIDNQLRGRAGRQGDPGS++F +SL+D++ + F D
Sbjct: 497 GEGVPELGGLAILGTERHESRRIDNQLRGRAGRQGDPGSSQFFLSLEDDLMRIFGADNIT 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ + ++ +ED PIE I + + Q E + + IRK ++E+D+V+ QR+ +Y+
Sbjct: 557 GI--MDKLGMEEDEPIEHSLITKSIERAQKKVEDHNYNIRKYVLEYDDVMNQQREVLYEQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ IL NES + I + + +V E + D +P W + L K L
Sbjct: 615 RRRILR--NESLRETINEMIDKLVTESVDAYADEKLYPEEWDYEGLYKH--------LSQ 664
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
F EE+ ++S D+ + DL L+R L I ++
Sbjct: 665 YFL----------TEEI--MSSQDMEEYSRQDL----------------LERLLEIAHEE 696
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
Y+ ++ LG+ + + ++E+A++++ +D W +HL
Sbjct: 697 ------YQDRVDM----LGEAMFS-----------------QLEKAIMLRVVDNKWMEHL 729
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
NM+ L + +R++G +NPL EYK + F +M++A + T+ +L
Sbjct: 730 DNMDMLREGIGLRAYGQKNPLVEYKFEAFDMFQNMIAAIQDETIMAL 776
>gi|94496384|ref|ZP_01302961.1| preprotein translocase, SecA subunit [Sphingomonas sp. SKA58]
gi|94424130|gb|EAT09154.1| preprotein translocase, SecA subunit [Sphingomonas sp. SKA58]
Length = 911
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/442 (47%), Positives = 279/442 (63%), Gaps = 36/442 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEM+T VVTVNDYLA RD
Sbjct: 81 MRHFDVQMVGGIVLHRGEIAEMRTGEGKTLVATLATYLNALEGKGVHVVTVNDYLASRDC 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +V+RFLGL+ G+I + ++RR+ Y DITY N+ELGFDYLRDN+ + +V
Sbjct: 141 DWMGQVYRFLGLTTGVIVPNLSEDQRRAAYEADITYATNNELGFDYLRDNMKFDRGSMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++AIVDEVDS+LIDE R PL+ISG + D + VA V Y + K
Sbjct: 201 R---PFNYAIVDEVDSILIDEARTPLIISG-PTDDKSELYVAVDAIVKQVTDADYEKDEK 256
Query: 158 NNSVELTEEGIALAEMALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
SV LTE+G E LE +L+D EN V AL+A +RRD+ YIV+
Sbjct: 257 QRSVTLTEDGTEKIERLLEQAGLLQGANLYDFENTAVVHHVNQALRANVMFRRDIDYIVK 316
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +II+E TGR+ + RRWS+G+HQAVEAKEG+ I+ ++ +A IT+Q+ F++YPKLSG
Sbjct: 317 DGKVVIIDEFTGRMMDGRRWSDGLHQAVEAKEGVNIEPENQTLASITFQNYFRMYPKLSG 376
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF ++++M V+ +PTN P RVD + K+ + ++ G
Sbjct: 377 MTGTAATEATEFYEIYKMNVVTIPTNRPVQRVDEEDTFYKNLEDKFRGIARTIKVHAEKG 436
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+ S+E SE LS+ L Q+G+ H VLNAR + EA VAQAGRK A+TI+TNMA
Sbjct: 437 QPVLVGTVSIEKSEMLSEFLNQEGVKHAVLNAR--FHESEAHIVAQAGRKGAVTIATNMA 494
Query: 391 GRGTDIILGGNPKMLAKKIIED 412
GRGTDI LGGN +M + + D
Sbjct: 495 GRGTDIKLGGNLEMRVEDELRD 516
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 7/199 (3%)
Query: 504 PLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGD 563
P GP + + EV E EV GGL V+ T HESRRIDNQLRGR+GRQGD
Sbjct: 518 PEGPDRDAAIARIEAEIEV----EKQEVLDAGGLFVLATERHESRRIDNQLRGRSGRQGD 573
Query: 564 PGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYY 623
PG +RF +SL D++ + F DT +A + S + + E +P + + + Q E
Sbjct: 574 PGLSRFYLSLDDDLMRIFGPDTMFAKMIRSNLEDGEALP-PSKWLSKAIETAQKKVEARN 632
Query: 624 FGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK 683
+ IRK +VE+D+V+ QRK +Y+ R I+ ++ + V++++ + P
Sbjct: 633 YDIRKQVVEYDDVMNDQRKVIYEQRSDIMDA--DTVDDVVTDMRHETVNDLVGASCPPGT 690
Query: 684 HPRYWSLDKLLKEFIAIAG 702
+P W +++L I G
Sbjct: 691 YPEQWDMERLKARTAEILG 709
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+E+++L+++LD W++HL ++ L V++R++ + P+ EYK + F ML R
Sbjct: 755 IEKSILLQSLDHHWKEHLSTLDALRQVVHLRAYAQKTPINEYKQEAFALFERMLENIRED 814
Query: 870 TVESL--VQYW--SSPMESQEL 887
S+ VQ+ PME L
Sbjct: 815 VTGSIARVQFRMEQPPMEDYAL 836
>gi|257791747|ref|YP_003182353.1| preprotein translocase subunit SecA [Eggerthella lenta DSM 2243]
gi|257475644|gb|ACV55964.1| preprotein translocase, SecA subunit [Eggerthella lenta DSM 2243]
Length = 934
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/439 (46%), Positives = 279/439 (63%), Gaps = 29/439 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG L+DG IAEMKT VVTVNDYLA+RD+
Sbjct: 80 LRHFDVQLIGGMALNDGQIAEMKTGEGKTLVSTLAGYLNALPGNNVHVVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLG+ VGLIQ GM P+++ Y+ D+TY NSE GFDYLRDN+ +E V
Sbjct: 140 EWMGQVYRFLGMEVGLIQNGMRPDKKIPAYKADVTYGTNSEFGFDYLRDNMVTRAEARVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFAIVDEVDS+LIDE R PL+ISG ++ Y A+V LV + ++
Sbjct: 200 RG---HHFAIVDEVDSILIDEARTPLIISGAGTQAAETYNKFARVMVGLVPEADFDMDEA 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ TE G+ E L +D++ D + + ALKA+ + RDV Y+V NG+ I
Sbjct: 257 KKTINATESGLEKIEAMLGIDDIYADPSGQLPNHLQQALKAQFLFHRDVDYVVVNGEVKI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKE + ++ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 VDEFTGRIMEGRRYSEGLHQALEAKERVLVREENQTLATITLQNYFRLYEKLSGMTGTAM 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE+ EF +++++PV+ +P N P R D + T K+ +V + G+P L+G
Sbjct: 377 TEDAEFREIYKLPVVAIPPNRPVARKDEDDLIYRTVEAKFNAVADDVAERNKAGQPCLIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LS LL ++GI H LNA K REA +AQAGR A+TI+TNMAGRGTDI
Sbjct: 437 TVSIESSEKLSRLLDKRGIKHETLNA--KNHEREAHIIAQAGRVGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGNP +LA ++ +R L
Sbjct: 495 LLGGNPDVLADDVLRERGL 513
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 9/156 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ E +V GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +SL+D++ + F
Sbjct: 547 CAEEHDQVIAAGGLTVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSLEDDLMRLFGG 606
Query: 584 DTSWAVDLISRITND----EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEV 639
+ +D I+R+ EDMPI+ + + + G Q E +F RK+++E+D+V+ +
Sbjct: 607 NR---MDSIARMMEKTDMPEDMPIQAGMVSKAIEGAQRQVESMHFAARKNVLEYDDVMNL 663
Query: 640 QRKHVYDLRQSILTGA--NESCSQQIFQYMQAVVDE 673
QR +Y R +IL G +E + I ++AVV E
Sbjct: 664 QRVAIYSERNAILDGKDMDERIPEIIGDAVEAVVAE 699
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
MK +E V+++ +D W HL M+ L + + +R+FG R+PL EYK + F ++ +
Sbjct: 766 MKMLEGQVMLRMIDTRWMAHLQEMDYLKAGIGLRAFGQRDPLVEYKNEAYNAFQNLTAG 824
>gi|429758554|ref|ZP_19291067.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
181 str. F0379]
gi|429172768|gb|EKY14305.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
181 str. F0379]
Length = 935
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/441 (48%), Positives = 283/441 (64%), Gaps = 32/441 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R F VQ++GG LH G+IAEMKT VVTVNDYLA+ ++
Sbjct: 80 RPFHVQVMGGIALHRGNIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAKYQSD 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+ FLGL+VG + G PEERR Y DITY N+E GFDYLRDN+A E +V R
Sbjct: 140 LMARVYNFLGLTVGCVLVGQEPEERREQYNADITYGTNNEFGFDYLRDNMAQRPEDMVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+F IVDEVDS+LIDE R PL+ISG AS DV R Y A++A +LV+ Y V+ K
Sbjct: 200 G---HNFVIVDEVDSILIDEARTPLIISGPASGDVNRWYTEFARIANILVRDEDYEVDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ + E GI E L +L++ N P F+ NA++AKE + RD YIV G+ LI
Sbjct: 257 KKTIGVLEPGIDKVEDQLGVENLYEAANTPLIGFLNNAIRAKELFHRDRDYIVDGGEVLI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTGT 274
++E TGRV RR+++G+HQA+EAKEG+KIQA++ +A IT Q+ F+LYP+ SGMTGT
Sbjct: 317 VDEHTGRVLPGRRYNDGMHQAIEAKEGVKIQAENQTLATITLQNYFRLYPEGSRSGMTGT 376
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A+TE EF +++ VI +PTN P IR D + T GK+ ++E G+PVL
Sbjct: 377 AETEAAEFASTYKIGVIPIPTNRPMIRKDQGDLVYPTEAGKFRAIIDDIEERHAAGQPVL 436
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
VG+ SV+ SE LS +LK++ IPH VLNA K AREA+ VA AGRK A+T++TNMAGRGT
Sbjct: 437 VGTASVQKSELLSRMLKERKIPHQVLNA--KQHAREAQIVAMAGRKGAVTVATNMAGRGT 494
Query: 395 DIILGGNPKMLAKKIIEDRLL 415
DI+LGGN + LA+ + R L
Sbjct: 495 DIMLGGNSEFLAQANLAARGL 515
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 69/351 (19%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+G+ HESRRIDNQLRGR+GRQGDPG +RF +S++D++ + FS + A +++
Sbjct: 550 GGLYVLGSERHESRRIDNQLRGRSGRQGDPGESRFYLSMEDDLMRLFS--SGLAQRIMAS 607
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
ED P+E + R + Q E F IRK+++++D+V+ QR+ +Y+ R+ +L G
Sbjct: 608 GAYPEDQPLENRIVTRSIASAQHQVEARNFEIRKNVLKYDDVMTDQRELIYEQRRRVLEG 667
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
E Q+ +M+++V II + L PR W+L +L
Sbjct: 668 --EDLGPQMKGFMESLVSGIIAEKTNGLS-PREWNLKELW-------------------- 704
Query: 715 DTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRY 774
DTL Y+P P + S LT++
Sbjct: 705 DTL----------------RGYYPPSVTPEEVEEQYGGHGS------------LTRD--- 733
Query: 775 RATTNLLRKYLGDILIASYLNVVQESRYD--------DVYMKEVERAVLVKTLDCFWRDH 826
+L+R+ LGDI Y ++ ++ D M+ +ER V++ T+D WR+H
Sbjct: 734 ----DLMREVLGDIE-TQYQEAEEQLNHNPLAIQQLGDEPMRTLERRVVIATVDRLWREH 788
Query: 827 LINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQY 877
L M+ L + +R+ G R+PL EYK +G R F +M+ R +V+ + Y
Sbjct: 789 LYEMDYLKEGIGLRAMGQRDPLVEYKDEGARMFNTMMDRIREESVQQIFSY 839
>gi|406671407|ref|ZP_11078646.1| protein translocase subunit secA [Facklamia hominis CCUG 36813]
gi|405580657|gb|EKB54716.1| protein translocase subunit secA [Facklamia hominis CCUG 36813]
Length = 816
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 276/424 (65%), Gaps = 29/424 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQI GG V+H+G IAEMKT VVTVNDYLA RD++ M
Sbjct: 82 FKVQIQGGFVIHNGDIAEMKTGEGKTLTETMPVYLNALTGKGVHVVTVNDYLATRDSKEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++RFLGL+VGL M E+R Y CDITY+ N+ELGFDYLRDN+ +Q+V R
Sbjct: 142 GELYRFLGLTVGLNLNSMNSAEKRQAYACDITYSTNNELGFDYLRDNMVVYKDQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +FA+VDEVDS+L+DE R PL+ISG+ K Y A + L + YT++L + S
Sbjct: 200 -PLYFAVVDEVDSILVDEARTPLIISGQGEKSNILYNRADYFVKGLTEEEDYTIDLTSKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ LT++G+ AE +L+D +N + AL+A D+ Y+V G+ I++
Sbjct: 259 IMLTDQGVDKAEKIFRLENLYDVDNTALVHHIDQALRANYIMLYDIDYVVDEGEVKIVDP 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ E RR+S+G+HQA+EAKE ++IQ +S +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRIMEGRRYSDGLHQAIEAKENVEIQDESKTMATITFQNYFRMYEKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF +++ M VI +PTN P IR D P + R K++ +E++ LG+P+LVG+ +
Sbjct: 379 EEFREIYNMNVITIPTNRPVIRDDRPDLLYPNLRSKFKAVVKEIKRRHELGQPLLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SEYLS+LLKQ+GIPH VLNA+ + +EAE V QAG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSEYLSNLLKQEGIPHEVLNAKNHF--KEAEIVMQAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPK 403
K
Sbjct: 497 SGVK 500
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
GS VK +GGL VIGT HESRRIDNQLRGRAGRQGDPG+++F +SL+D++ ++F D
Sbjct: 496 GSGVKEVGGLCVIGTERHESRRIDNQLRGRAGRQGDPGASQFYLSLEDDLMRRFGTDRVQ 555
Query: 588 AVDLISRITND----EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
A+ R+ D +DM IE + RQ+ Q E + RKS++E+DEV+ QR+
Sbjct: 556 AI--WERLNMDDGEEDDMAIESKMLSRQVESAQKRVEGNNYDTRKSVLEYDEVMREQREV 613
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVD-EIIFGNVDPLKHPRYWSLDKLL 694
+Y R ++ ES + + ++ +D E+ + K W L+ LL
Sbjct: 614 IYGQRLQVIN-EQESLTDYVKAMIKRTIDREVAYATEGDKKD---WKLESLL 661
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
E E+ ++++ +D W DH+ +M+ L V +R++ NPL EY+ +G F M++A
Sbjct: 714 EFEKVIILRVVDSKWTDHIDSMDHLRQGVGLRAYAQTNPLTEYQTEGYDRFQEMIAA 770
>gi|326318398|ref|YP_004236070.1| preprotein translocase subunit SecA [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375234|gb|ADX47503.1| preprotein translocase, SecA subunit [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 922
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/468 (46%), Positives = 289/468 (61%), Gaps = 51/468 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G I+EM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLLGGMALHYGKISEMRTGEGKTLTATLPVYLNALSGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGL+VG+ M EE+++ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 RWMGRLYNFLGLAVGINLPQMPREEKQAAYAADITYGTNNEYGFDYLRDNMVYEAHDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R +FAIVDEVDS+LIDE R PL+ISG+A A Y KV LLV
Sbjct: 201 R---ALNFAIVDEVDSILIDEARTPLIISGQAEDHTAMYIAMNKVVPLLVRQEGEADPRT 257
Query: 148 -QGL----HYTVELKNNSVELTEEGIALAEMALETNDLWDEN----DPWARFVMN----A 194
+G+ +T++ K++ V LTE+G AE L L E DP +M+ A
Sbjct: 258 GEGVTKPGDFTIDEKSHQVFLTEQGHETAERVLAAQGLIPEGASLYDPSNITLMHHLYAA 317
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
L+A Y RD Y+V+NG+ +I++E TGR+ RRWSEG+HQAVEAKEG++IQA++ +A
Sbjct: 318 LRANHLYHRDQHYVVQNGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIQAENQTLA 377
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT+Q+ F+LY KLSGMTGTA TE EF +++ + + +P N P+ R D + + T R
Sbjct: 378 SITFQNYFRLYNKLSGMTGTADTEAYEFQEIYGLETVVIPPNRPSKRDDQLDRVYKTTRE 437
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K++ A Q++ G+PVLVG+TS+ENSE + DLL + G+PH VLNA K AREA+ V
Sbjct: 438 KYDAAIQDIRECHERGQPVLVGTTSIENSEIIDDLLNKAGLPHQVLNA--KQHAREADIV 495
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREA 422
AQAGR ITI+TNMAGRGTDI+LGGN + I +D L T++A
Sbjct: 496 AQAGRAGMITIATNMAGRGTDIVLGGNIEKEVAAIEDDESLDEATKQA 543
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
+ +VK LGGL +I T HESRRIDNQLRGR+GRQGDPGS+RF +SL D + + F+ D
Sbjct: 555 DNEKVKALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLMRIFAGDRV 614
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A+ + R+ + IE + R + Q E F +RK L+E+D+V QRK +Y
Sbjct: 615 RAI--MERLKMPDGEAIEAGIVTRSIESAQRKVEARNFDVRKQLLEYDDVANDQRKVIYQ 672
Query: 647 LRQSILTGAN---------ESCSQQIF-QYM 667
R IL A+ ESC I QY+
Sbjct: 673 QRNEILDAADLSGVIAGMRESCLTDIVRQYV 703
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ +RAVL+++ D WRDHL ++ L +++R + + P +EYK + F ++ +
Sbjct: 772 QFQRAVLLQSFDSNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVK 830
>gi|29831614|ref|NP_826248.1| preprotein translocase subunit SecA [Streptomyces avermitilis
MA-4680]
gi|81717961|sp|Q82DB1.1|SECA1_STRAW RecName: Full=Protein translocase subunit SecA 1
gi|29608730|dbj|BAC72783.1| putative preprotein translocase SecA subunit [Streptomyces
avermitilis MA-4680]
Length = 939
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 286/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQMMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGDGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLSVGCILANMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLKKGEAGNTLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K++ ++
Sbjct: 377 NKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNKPMVRKDQSDLIYRTEVAKFDAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 118/224 (52%), Gaps = 8/224 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEKAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVETQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +QI +M +D I W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLQEQIHHFMDDTIDAYIEAET-AEGFAEEWDLDRL 712
Query: 694 LKEFIAIAG-KILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
F + K+ D +GD + E + E DI+ Y
Sbjct: 713 WGAFKQLYPVKVTVDELEEAAGDRAGLTAEFISESIKDDIHEQY 756
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMDGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|19705039|ref|NP_602534.1| preprotein translocase subunit SecA [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|81763619|sp|Q8RI93.1|SECA_FUSNN RecName: Full=Protein translocase subunit SecA
gi|19712953|gb|AAL93833.1| Protein translocase subunit secA [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 869
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/460 (45%), Positives = 291/460 (63%), Gaps = 52/460 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGMVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGVHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ ++R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTDQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEEILKIDNLYAPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVLVG+ S+++SE LS+LLK++ IPHNVLNA KY A+EAE
Sbjct: 438 EKINSIIDRIQGLYEKGQPVLVGTISIKSSEELSELLKKRKIPHNVLNA--KYHAKEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDR 413
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A ++ R
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMALAEVDSR 535
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 69/343 (20%)
Query: 523 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
C+NE +V LGGL ++GT HESRRIDNQLRGR+GRQGDPG + F +SL+D++ + F
Sbjct: 550 QCANEKEQVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSLEDDLMRLFG 609
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
+ + + R+ E PI I + Q E FGIRK+L+EFD+V+ Q
Sbjct: 610 --SERVMIWMDRLKLPEGEPITHRMINSAIEKAQKKIEARNFGIRKNLLEFDDVMNKQ-- 665
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
R +I NE+ + +D LK
Sbjct: 666 -----RTAIYESRNEALA------------------IDNLKD------------------ 684
Query: 703 KILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
+IL L I+ K E+ E ID N Y D ++
Sbjct: 685 RILGMLQRNITEKVYEKFAPEMREDWDIDGLNEYLKDF-------------------YVY 725
Query: 763 ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCF 822
DD R+T + + + L+ Y N +E+ M+++E+ +L +D
Sbjct: 726 EERDD---KAYLRSTKEEYIERIYNALVEQYNN--KEAELGSDLMRKLEKHILFDVVDNR 780
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
WR HL +++ L ++ +R++G R+P+ EYK+ + F M++
Sbjct: 781 WRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFEEMIAT 823
>gi|374320753|ref|YP_005073882.1| preprotein translocase subunit SecA [Paenibacillus terrae HPL-003]
gi|357199762|gb|AET57659.1| Preprotein translocase secA subunit [Paenibacillus terrae HPL-003]
Length = 816
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/422 (46%), Positives = 280/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 81 RHYDVQMLGGIALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSG 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG+SVGL G+ E++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYNFLGMSVGLNLSGLGHGEKQDAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YT+++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKSLNVEEDYTLDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G++ AE +L+D E+ ++ ALKA R DV Y+V +G+ LI+
Sbjct: 258 KSVALTENGVSKAENFFGLENLYDQESVTINHHIVQALKANAIMRLDVDYVVADGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE + +Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKENIVVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN N RVD+P + + +GK+ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNRANQRVDMPDVVYKSVKGKFHAVVDEIVERHKNNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG ++TI+TNMAGRGTDI+
Sbjct: 438 ISIENSELLSEMLKRKGVRHKVLNA--KYHAEEAEIISRAGEAGSVTIATNMAGRGTDIV 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 68/338 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVSTIGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F RK ++++D+V+ QR +Y
Sbjct: 555 VLNMMERLGFEEDQPIESRMITRAIESAQKRVEGNNFDQRKVVLQYDDVMNQQRTIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ +L N + E++F + P+
Sbjct: 615 RREVLESEN--------------IKEVVFDMIKPV------------------------- 635
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
IE + E + D D+P+ L +S+L AI DD
Sbjct: 636 -------------IERVVEAHCGD-------DIPENWELEEVAEYVNSNLLEENAISRDD 675
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
L + + K + + +E+ +D+ ++E E+ ++++ +D W DH+
Sbjct: 676 LWGKEKEEIVELIFEK------VTERYHRREETIGEDM-VREFEKVIVLRAVDSKWMDHI 728
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M++L +++R++G +PL EY+ +G F +M+++
Sbjct: 729 DAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHAMIAS 766
>gi|219850054|ref|YP_002464487.1| preprotein translocase subunit SecA [Chloroflexus aggregans DSM
9485]
gi|259496162|sp|B8G7L6.1|SECA_CHLAD RecName: Full=Protein translocase subunit SecA
gi|219544313|gb|ACL26051.1| preprotein translocase, SecA subunit [Chloroflexus aggregans DSM
9485]
Length = 992
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/485 (46%), Positives = 291/485 (60%), Gaps = 71/485 (14%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G IAEMKT +VTVNDYLA+ A
Sbjct: 80 LRHYDVQLIGGIVLHQGKIAEMKTGEGKTLVATLPLYLNALEGKGVHLVTVNDYLAKVGA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMI-----------------------PEERRSNYRCDITYT 74
WM ++ FLGLSVG I P RR Y DITY
Sbjct: 140 GWMGPIYHFLGLSVGFIAHDQSALYDPDYIDPNANPEDQRLVHWRPCTRREAYLADITYG 199
Query: 75 NNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVA 134
N+E GFDYLRDN+A + QLV R H+AIVDEVD++LIDE R PL+ISG A K
Sbjct: 200 TNNEFGFDYLRDNMAYDKSQLVQRE---LHYAIVDEVDNILIDEARTPLIISGPAQKSSD 256
Query: 135 RYPVAAKVAELLV-----------QGLH----YTVELKNNSVELTEEGIALAEMALET-- 177
Y AK+ L +GL + V+ + S+ L+E+GI E L
Sbjct: 257 LYRQMAKLVRQLRRSSVTAKQVKEEGLEPDGDFFVDERTKSIYLSEKGIEKLEKLLNIPP 316
Query: 178 -NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGI 234
L+D E+ +V NALKA+ Y+RD Y+V NG+ +II+E TGR RRWS+G+
Sbjct: 317 GESLFDPEHYEKTHYVENALKAQFIYQRDRDYMVTPNGEVVIIDEFTGRAMPGRRWSDGL 376
Query: 235 HQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVP 294
HQA+EAKEG+ I+ ++V +A IT+Q+ F++Y KL+GMTGTA TE +EF K++ + V+ +P
Sbjct: 377 HQAIEAKEGVPIKNENVTLATITFQNYFRMYKKLAGMTGTAYTEREEFAKIYNLDVVVIP 436
Query: 295 TNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQG 354
T+ P IR DLP Q +AT K+ +EV+ M +GRPVL+G+TSVE SE LS +LKQ G
Sbjct: 437 THKPMIRKDLPDQIYATEEAKFRAVLREVQEMHEIGRPVLIGTTSVETSERLSAMLKQAG 496
Query: 355 IPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRL 414
IPHNVLNA K+ REA VAQAGRK A+T++TNMAGRGTDI+LGGNP L ++ +
Sbjct: 497 IPHNVLNA--KHHEREAAIVAQAGRKGAVTVATNMAGRGTDILLGGNPDGLVEEFLRKEG 554
Query: 415 LLLLT 419
L L T
Sbjct: 555 LTLET 559
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 102/172 (59%), Gaps = 19/172 (11%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
EG EV++LGGLHVIGT HE+RRIDNQLRGRAGRQGDPGS+RF +SL+DE+ ++F
Sbjct: 579 EGEEVRQLGGLHVIGTERHEARRIDNQLRGRAGRQGDPGSSRFFLSLEDELLRRFG-PVE 637
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY- 645
L+ R D D+P++ + R + Q E Y F IRK VEFD+V+ QR+ +Y
Sbjct: 638 RIKGLMERFV-DSDVPLQAGLLDRTIESAQTRVEGYNFDIRKHTVEFDDVMNKQRQIIYA 696
Query: 646 ---------DLRQSILTGANESCSQQIFQYMQAVVDEI-------IFGNVDP 681
D+R+ +L E +QI +++ VDE ++ +DP
Sbjct: 697 DRKAILDEADMRERVLDLMAEEIQRQIDEHLSDGVDEFGLTELLRVYRRIDP 748
>gi|168205592|ref|ZP_02631597.1| preprotein translocase, SecA subunit [Clostridium perfringens E
str. JGS1987]
gi|170662851|gb|EDT15534.1| preprotein translocase, SecA subunit [Clostridium perfringens E
str. JGS1987]
Length = 840
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGTVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQREDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++GIPH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGIPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 AV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA++++++ V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVVTSAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS---LKRWLAIC 764
F GD L+K Y D+ P F K+SS + R C
Sbjct: 650 DFEKELGD-LIK----------------YLEDIMLPHGKFTVEELKTSSNEEITRKFIEC 692
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+ ++ K +E M+E+ER ++++ +D W
Sbjct: 693 AREIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWM 726
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
DH+ +M+ L + +R++ ++P + Y+++G F M++ + TV L
Sbjct: 727 DHIDDMDHLKQGIGLRAYKQQDPTQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|365861298|ref|ZP_09401072.1| preprotein translocase subunit SecA [Streptomyces sp. W007]
gi|364009292|gb|EHM30258.1| preprotein translocase subunit SecA [Streptomyces sp. W007]
Length = 940
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/450 (46%), Positives = 285/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQMMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLSVGCIVANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 GKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEQAEEAVKAEFEEVKDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E QI +M +D+ I W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLQDQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WGAF 716
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|302380943|ref|ZP_07269404.1| preprotein translocase, SecA subunit [Finegoldia magna
ACS-171-V-Col3]
gi|302311164|gb|EFK93184.1| preprotein translocase, SecA subunit [Finegoldia magna
ACS-171-V-Col3]
Length = 909
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/451 (45%), Positives = 282/451 (62%), Gaps = 49/451 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+ + VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MKQYRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPAYLNALSGKGVHVVTVNDYLAKRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH FLGL+VG+I G+ +ERR NY CDITY N++ GFDYLRDN+ + V
Sbjct: 139 EWMGKVHEFLGLTVGVIVYGLDNDERRENYACDITYGTNNQYGFDYLRDNMVIYKKDKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R +FAIVDEVDS+LIDE R PL+ISG+ + Y A A L
Sbjct: 199 RG---LNFAIVDEVDSILIDEARTPLIISGQGDESTDMYMRANMFANGLTGRIMDPEEDK 255
Query: 148 ----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALK 196
+ + + V+ K + LTE G AE +L D N+ A + ALK
Sbjct: 256 PDIFDREFKDETVDFLVDEKRKTASLTEVGTRKAEEYFGVENLSDPNNMELAHHINQALK 315
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A +RD+ Y+V++ + LI++E TGR+ E RR+S+G+HQA+EAKEG++++++S +A +
Sbjct: 316 ANNTMKRDIDYVVKDDEILIVDEFTGRIMEGRRYSDGLHQAIEAKEGVEVKSESKTLATV 375
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KLSGMTGTAKTEE EF ++++M V+E+PTN P RVD + + K+
Sbjct: 376 TFQNYFRMYNKLSGMTGTAKTEEAEFNEIYKMDVVEIPTNKPVARVDEQDRVYINENAKF 435
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+E++ + + G+P+LVG+ S+E SE LS+LLK+ GI H+VLNA K REAE VAQ
Sbjct: 436 NAIVEEIKEIHKTGQPILVGTISIEVSEKLSNLLKKNGIKHDVLNA--KQHEREAEIVAQ 493
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
AG +TI+TNMAGRGTDI+LGGNP +AK
Sbjct: 494 AGMFDKVTIATNMAGRGTDILLGGNPDFMAK 524
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 11/168 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V +GGL++IGT HESRRIDNQLRGR+GRQGDPG +RF VSL D + + F +T
Sbjct: 575 KVLEVGGLYIIGTERHESRRIDNQLRGRSGRQGDPGRSRFFVSLGDNLMRLFGGETIQKY 634
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ DE P+E I + + Q E FGIRK+++++D+V+ QRK +Y R
Sbjct: 635 AESGKFPEDE--PMEFRTITKAIERAQTKVESNNFGIRKNVLKYDDVMNAQRKVIYTERD 692
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDP-LKHPRY--WSLDKLL 694
+L G + + + + A++ +II +D + P+ W ++ L+
Sbjct: 693 KVLDG------EDMHESIVAMIKDIISNAIDTYCQDPKSENWEMEALM 734
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWR 824
DLT+ Y +K D +I L V +E +E+ER +L+ +D W
Sbjct: 747 DLTRLNSYN------KKTFTDYVIQKALEVYNAKEEAIGKEKFREIERVILLMVVDRKWM 800
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMES 884
DH+ M++L + +R+FG ++P+ Y +G F M + + TV + + P+E
Sbjct: 801 DHIDAMDQLRQGIGLRAFGQQDPVRAYNNEGFEMFEDMNHSIKEDTVRGM--FNVQPVEE 858
Query: 885 QE 886
E
Sbjct: 859 IE 860
>gi|374989258|ref|YP_004964753.1| preprotein translocase subunit SecA [Streptomyces bingchenggensis
BCW-1]
gi|297159910|gb|ADI09622.1| preprotein translocase subunit SecA [Streptomyces bingchenggensis
BCW-1]
Length = 949
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/450 (45%), Positives = 287/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHKFLGLEVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTRGEAANPQKGE 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVTKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVMDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEAVEIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PT+ P R+D + T K++ +++
Sbjct: 377 TKLSGMTGTAMTEAAEFHQIYKLGVVPIPTHRPLARLDQSDLIYRTEVAKFDAVVEDIVE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+PVLVG+TSVE SEYLS L ++G+PH VLNA K REA VAQAGR+ A+T+
Sbjct: 437 KHEKGQPVLVGTTSVEKSEYLSQQLAKRGVPHEVLNA--KQHDREASIVAQAGRRGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAEAAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
EVL QR+ +Y R+ +L G E +Q+ +M + + I W LD+L
Sbjct: 657 EVLNRQREVIYGERRRVLEG--EDLHEQVRHFMDDTIKDYIRLETSE-GFAEEWDLDRLW 713
Query: 695 KEF 697
F
Sbjct: 714 GAF 716
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMDGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|407937623|ref|YP_006853264.1| preprotein translocase subunit SecA [Acidovorax sp. KKS102]
gi|407895417|gb|AFU44626.1| preprotein translocase subunit SecA [Acidovorax sp. KKS102]
Length = 918
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/447 (47%), Positives = 284/447 (63%), Gaps = 51/447 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLLGGMALHFGKIAEMRTGEGKTLTATLPVYLNALSGKGVHVVTVNDYLANRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM R++ FLGL+VG+ M EE+++ YR DITY N+E GFDYLRDN+ ++
Sbjct: 141 QWMGRLYNFLGLTVGINLPNMPREEKQAAYRADITYGTNNEYGFDYLRDNMVYEAQD--- 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R + +FAIVDEVDS+LIDE R PL+ISG+A A Y KV LLV
Sbjct: 198 RVQQGLNFAIVDEVDSILIDEARTPLIISGQAEDHTAMYIAMNKVVPLLVRQEGEADPRT 257
Query: 148 -QGL----HYTVELKNNSVELTEEGIALAEMALETNDLWDEN----DPWARFVMN----A 194
+G+ +T++ K + V LTE+G AE L ++ L E DP +M+ A
Sbjct: 258 GEGVTKPGDFTLDEKTHQVFLTEQGHETAERILASHGLIAEGASVYDPANITLMHHLYAA 317
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
L+A Y RD Y+V+NG+ +I++E TGR+ RRWSEG+HQAVEAKEG+ IQA++ +A
Sbjct: 318 LRANHLYHRDQHYVVQNGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVNIQAENQTLA 377
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT+Q+ F+LY KL+GMTGTA TE EF +++ + + +P N P+ R D + + T R
Sbjct: 378 SITFQNYFRLYSKLAGMTGTADTEAYEFQEIYGLETMVIPPNRPSKRDDQLDRVYKTTRE 437
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K+E A +++ G+PVLVG+TS+ENSE + LL ++G+PH VLNA K AREA+ V
Sbjct: 438 KYEAAIKDIRECHERGQPVLVGTTSIENSEIIDQLLNKEGLPHQVLNA--KQHAREADIV 495
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGN 401
AQAGR+ ITI+TNMAGRGTDI+LGGN
Sbjct: 496 AQAGREGMITIATNMAGRGTDIVLGGN 522
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+VK LGGL +I T HESRRIDNQLRGR+GRQGDPGS+RF +SL D + + F+ D A+
Sbjct: 558 KVKALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLMRIFAGDRVKAI 617
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ + IE + R + Q E F IRK L+E+D+V QRK +Y R
Sbjct: 618 --MDRLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRN 675
Query: 650 SILTGANES 658
IL + S
Sbjct: 676 DILDATDLS 684
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ ER VL++ D WRDHL ++ L +++R + + P +EYK + F ++ +
Sbjct: 772 QFERVVLLQNFDSNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVK 830
>gi|169825228|ref|YP_001692839.1| preprotein translocase subunit [Finegoldia magna ATCC 29328]
gi|417924848|ref|ZP_12568275.1| preprotein translocase, SecA subunit [Finegoldia magna
SY403409CC001050417]
gi|226732201|sp|B0S3K9.1|SECA_FINM2 RecName: Full=Protein translocase subunit SecA
gi|167832033|dbj|BAG08949.1| preprotein translocase subunit [Finegoldia magna ATCC 29328]
gi|341592145|gb|EGS35031.1| preprotein translocase, SecA subunit [Finegoldia magna
SY403409CC001050417]
Length = 909
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/451 (45%), Positives = 282/451 (62%), Gaps = 49/451 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+ + VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MKQYRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPAYLNALSGKGVHVVTVNDYLAKRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH FLGL+VG+I G+ +ERR NY CDITY N++ GFDYLRDN+ + V
Sbjct: 139 EWMGKVHEFLGLTVGVIVYGLDNDERRENYACDITYGTNNQYGFDYLRDNMVIYKKDKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R +FAIVDEVDS+LIDE R PL+ISG+ + Y A A L
Sbjct: 199 RG---LNFAIVDEVDSILIDEARTPLIISGQGDESTDMYMRANMFANGLTGRIMDPEEDK 255
Query: 148 ----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALK 196
+ + + V+ K + LTE G AE +L D N+ A + ALK
Sbjct: 256 PDIFDREFKDETVDFLVDEKRKTASLTEVGTRKAEEYFGVENLSDPNNMELAHHINQALK 315
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A +RD+ Y+V++ + LI++E TGR+ E RR+S+G+HQA+EAKEG++++++S +A +
Sbjct: 316 ANNTMKRDIDYVVKDDEILIVDEFTGRIMEGRRYSDGLHQAIEAKEGVEVKSESKTLATV 375
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KLSGMTGTAKTEE EF ++++M V+E+PTN P RVD + + K+
Sbjct: 376 TFQNYFRMYNKLSGMTGTAKTEEAEFNEIYKMDVVEIPTNKPVARVDEQDRVYINENAKF 435
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+E++ + + G+P+LVG+ S+E SE LS+LLK+ GI H+VLNA K REAE VAQ
Sbjct: 436 NAIVEEIKEIHKTGQPILVGTISIEVSERLSNLLKKNGIKHDVLNA--KQHEREAEIVAQ 493
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
AG +TI+TNMAGRGTDI+LGGNP +AK
Sbjct: 494 AGMFDKVTIATNMAGRGTDILLGGNPDFMAK 524
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 11/168 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V +GGL++IGT HESRRIDNQLRGR+GRQGDPG +RF VSL D + + F +T
Sbjct: 575 KVLEVGGLYIIGTERHESRRIDNQLRGRSGRQGDPGRSRFFVSLGDNLMRLFGGETIQKY 634
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ DE P+E I + + Q E FGIRK+++++D+V+ QRK +Y R
Sbjct: 635 AESGKFPEDE--PMEFRTITKAIERAQTKVESNNFGIRKNVLKYDDVMNAQRKVIYTERD 692
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDP-LKHPRY--WSLDKLL 694
+L G + + + + A++ +II +D + P+ W ++ L+
Sbjct: 693 KVLDG------EDMHESIVAMIKDIISNAIDTYCQDPKSENWEMEALM 734
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWR 824
DLT+ Y +K D +I L V +E +E+ER +L+ +D W
Sbjct: 747 DLTRLNSYN------KKTFTDYVIQKALEVYNAKEEAIGKEKFREIERVILLMVVDRKWM 800
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMES 884
DH+ M++L + +R+FG ++P+ Y +G F M + + TV + + P+E
Sbjct: 801 DHIDAMDQLRQGIGLRAFGQQDPVRAYNNEGFEMFEDMNHSIKEDTVRGM--FNVQPVEE 858
Query: 885 QE 886
E
Sbjct: 859 IE 860
>gi|310644312|ref|YP_003949071.1| protein translocase subunit seca [Paenibacillus polymyxa SC2]
gi|309249263|gb|ADO58830.1| Protein translocase subunit secA [Paenibacillus polymyxa SC2]
gi|392304998|emb|CCI71361.1| Protein translocase subunit secA [Paenibacillus polymyxa M1]
Length = 816
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/422 (46%), Positives = 279/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 81 RHYDVQMLGGIALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSG 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VGL M ++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYNFLGMTVGLNLANMDHAAKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YT+++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKSLNVEEDYTLDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G++ AE +L+D E+ ++ ALKA R DV Y+V +G+ LI+
Sbjct: 258 KSVALTENGVSKAENFFGLENLYDQESVTINHHIVQALKANAIMRLDVDYVVADGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE + +Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKENIIVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN RVD+P + + +GK+ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNKPNQRVDMPDVVYKSVKGKFHAVVDEILERNKKNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSELLSEMLKRKGVRHKVLNA--KYHAEEAEIISRAGEAGAVTIATNMAGRGTDIV 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 7/167 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F RK ++++D+V+ QR +Y
Sbjct: 555 VLNMMERLGFEEDQPIESRMISRAIESAQKRVEGNNFDQRKVVLQYDDVMNQQRAIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKL 693
R+ +L +E+ + +F ++ V++ ++ + D + P W LD++
Sbjct: 615 RREVLE--SENIKEIVFDMIKPVIERVVEAHCGDDI--PENWELDEV 657
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
++E E+ ++++ +D W DH+ M++L +++R++G +PL EY+ +G F +M+++
Sbjct: 708 VREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHAMIAS 766
>gi|345890185|ref|ZP_08841134.1| translocase subunit secA [Bilophila sp. 4_1_30]
gi|345038776|gb|EGW43161.1| translocase subunit secA [Bilophila sp. 4_1_30]
Length = 852
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 278/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ++G LH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 82 MRHYDVQLLGAMALHNGKIAEMKTGEGKTLVATLAVILNSLEGKGVHVVTVNDYLAKRDA 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGLSVG+I G+ E+R+ Y DITY N+E GFDYLRDN+ +EQLV
Sbjct: 142 EWMGRLYNFLGLSVGVIVAGLSDEQRKEAYGADITYGTNNEFGFDYLRDNMKFYAEQLVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AIVDEVDS+LIDE R PL+ISG + + Y +V L + HYTV+ K
Sbjct: 202 RG---HHYAIVDEVDSILIDEARTPLIISGASDESTDLYQKVDEVVRTLEKEKHYTVDEK 258
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARF-VMNALKAKEFYRRDVQYIVRNGKALI 216
+ LT+EG+ E L +L+D + A+ V+ +LKA +RRDV YIV++ + +I
Sbjct: 259 GKTASLTDEGVLYVEEQLGIENLYDTANITAQHHVLQSLKAHTVFRRDVDYIVKDDQVVI 318
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKE + + A++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 319 VDEFTGRLMAGRRFSDGLHQALEAKEHVTVAAENQTLASITFQNYFRMYDKLSGMTGTAD 378
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V +P N P +R D+P + T R K + Q ++ + G+PVLVG
Sbjct: 379 TEAVEFAQIYGLEVSTIPPNRPMVRKDMPDLIYRTRREKMQAIIQAIKELHATGQPVLVG 438
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE +S LLK++ +PH+VLNA K+ A+EAE VAQAG+ +TI+TNMAGRGTDI
Sbjct: 439 TISIETSELISQLLKREDVPHSVLNA--KHHAQEAEIVAQAGQAGKVTIATNMAGRGTDI 496
Query: 397 ILG 399
LG
Sbjct: 497 KLG 499
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 168/366 (45%), Gaps = 85/366 (23%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 499 GEGVVELGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRLFGSDRLS 558
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L+ ++ E PIE + + R + Q E ++F IRK+L+++D V+ QR +Y L
Sbjct: 559 G--LMQKLGMQEGEPIENNMVSRAIENAQKRVEGHHFEIRKTLLDYDNVMNQQRTVIYSL 616
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ D ++ P L+ +L E+++ +LDD
Sbjct: 617 RR------------------------------DLMQEP---DLEPILNEYLS---DLLDD 640
Query: 708 LFAGISGDTLLKSIEELPELNS-----IDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
++AG+ + IE+ + + ++I+ D P P R ++ L
Sbjct: 641 MYAGLEVSKAARDIEDEKPVRARLSEVMNIDRVLPGDAPLP------TREEAQEL----- 689
Query: 763 ICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCF 822
++ LR+ G + Y D+ R L++ LD
Sbjct: 690 -----------VQSIMAQLREEAGPL-------------YADLL-----RYFLLEELDRG 720
Query: 823 WRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL--VQYWSS 880
W++HL NM+ L + +R +G R+P EYK +G F +L R +L V+
Sbjct: 721 WKEHLRNMDFLRDGIGLRGYGQRDPKLEYKREGFNMFQELLVHIREGAFRALTRVRVEQR 780
Query: 881 PMESQE 886
P E E
Sbjct: 781 PTEVAE 786
>gi|182438324|ref|YP_001826043.1| preprotein translocase subunit SecA [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326778975|ref|ZP_08238240.1| Protein translocase subunit secA [Streptomyces griseus XylebKG-1]
gi|226732251|sp|B1VUY4.1|SECA_STRGG RecName: Full=Protein translocase subunit SecA
gi|178466840|dbj|BAG21360.1| putative preprotein translocase SecA subunit [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326659308|gb|EGE44154.1| Protein translocase subunit secA [Streptomyces griseus XylebKG-1]
Length = 939
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/450 (46%), Positives = 285/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQMMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHKFLGLSVGCIVANMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 8/224 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALETAEQAVKAEFEEVKDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +QI +M +D+ I W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLQEQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRL 712
Query: 694 LKEFIAIAG-KILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
F + K+ D +GD + E + E DI+ Y
Sbjct: 713 WGAFKQLYPVKVTVDELEEAAGDLAGVTAEFIAESVKNDIHEQY 756
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|182623976|ref|ZP_02951764.1| preprotein translocase, SecA subunit [Clostridium perfringens D
str. JGS1721]
gi|177910869|gb|EDT73223.1| preprotein translocase, SecA subunit [Clostridium perfringens D
str. JGS1721]
Length = 840
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGTVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQREDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++GIPH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGIPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+V + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 SV--VDRLRLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA++++++ V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVVTSAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS---LKRWLAIC 764
F GD L+K Y D+ P F K+SS + R C
Sbjct: 650 DFEKELGD-LIK----------------YLEDIMLPHGKFTVEELKTSSNEEITRKFIEC 692
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+ ++ K +E M+E+ER ++++ +D W
Sbjct: 693 AREIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWM 726
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
DH+ +M+ L + +R++ ++P + Y+++G F M++ + TV L
Sbjct: 727 DHIDDMDHLKQGIGLRAYKQQDPTQAYQMEGSDMFDEMINNIKIDTVRYL 776
>gi|110799230|ref|YP_696850.1| preprotein translocase subunit SecA [Clostridium perfringens ATCC
13124]
gi|168210102|ref|ZP_02635727.1| preprotein translocase, SecA subunit [Clostridium perfringens B
str. ATCC 3626]
gi|422346838|ref|ZP_16427752.1| protein translocase subunit secA [Clostridium perfringens
WAL-14572]
gi|422875085|ref|ZP_16921570.1| preprotein translocase subunit SecA [Clostridium perfringens F262]
gi|123049641|sp|Q0TNE0.1|SECA_CLOP1 RecName: Full=Protein translocase subunit SecA
gi|110673877|gb|ABG82864.1| preprotein translocase, SecA subunit [Clostridium perfringens ATCC
13124]
gi|170711746|gb|EDT23928.1| preprotein translocase, SecA subunit [Clostridium perfringens B
str. ATCC 3626]
gi|373225671|gb|EHP48002.1| protein translocase subunit secA [Clostridium perfringens
WAL-14572]
gi|380304080|gb|EIA16373.1| preprotein translocase subunit SecA [Clostridium perfringens F262]
Length = 840
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGTVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQREDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++G+PH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGVPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+V + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 SV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA++++++ V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVVTSAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS---LKRWLAIC 764
F GD L+K Y D+ P F K+SS + R C
Sbjct: 650 DFEKELGD-LIK----------------YLEDIMLPHGKFTVEELKTSSNEEITRKFIEC 692
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+ ++ K +E M+E+ER ++++ +D W
Sbjct: 693 AREIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWM 726
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
DH+ +M+ L + +R++ ++P + Y+++G F M++ + TV L
Sbjct: 727 DHIDDMDHLKQGIGLRAYKQQDPTQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|168215800|ref|ZP_02641425.1| preprotein translocase, SecA subunit [Clostridium perfringens NCTC
8239]
gi|182382329|gb|EDT79808.1| preprotein translocase, SecA subunit [Clostridium perfringens NCTC
8239]
Length = 840
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGTVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQREDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++G+PH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGVPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+V + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 SV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA++++++ V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVVTSAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSS---LKRWLAIC 764
F GD L+K Y D+ P F K+SS + R C
Sbjct: 650 DFEKELGD-LIK----------------YLEDIMLPHGKFTVEELKTSSNEEITRKFIEC 692
Query: 765 SDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWR 824
+ ++ K +E M+E+ER ++++ +D W
Sbjct: 693 AREIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWM 726
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
DH+ +M+ L + +R++ ++P + Y+++G F M++ + TV L
Sbjct: 727 DHIDDMDHLKQGIGLRAYKQQDPTQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|28493097|ref|NP_787258.1| preprotein translocase subunit SecA [Tropheryma whipplei str.
Twist]
gi|28572302|ref|NP_789082.1| preprotein translocase subunit SecA [Tropheryma whipplei TW08/27]
gi|81723843|sp|Q83N29.1|SECA_TROWT RecName: Full=Protein translocase subunit SecA
gi|81723863|sp|Q83NT4.1|SECA_TROW8 RecName: Full=Protein translocase subunit SecA
gi|28410433|emb|CAD66819.1| preprotein translocase SecA subunit [Tropheryma whipplei TW08/27]
gi|28476137|gb|AAO44227.1| preprotein translocase SecA subunit [Tropheryma whipplei str.
Twist]
Length = 847
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 283/430 (65%), Gaps = 30/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQI+GGA LH G IAEM T +VTVNDYLA +
Sbjct: 81 LRHFDVQIMGGAALHMGYIAEMFTGEGKTLVATLPAFLNSLSGNGVHIVTVNDYLAGYHS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV++ LGL G+I P R YR DITY N+E GFDYLRDN+A + + V
Sbjct: 141 QQMGRVYKVLGLETGVILADQDPSTRAQQYRADITYGTNNEFGFDYLRDNMAWSCAERVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGLHYTVEL 156
R +F I+DEVDS+LIDE R PL+ISG +S +V+R+ V A +A L G Y V+
Sbjct: 201 RG---HNFVILDEVDSILIDEARTPLIISGSSSGEVSRWFVEFAGIARALTAGEDYDVDE 257
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
+ ++V + E GIA E L ++L++ N P F+ N++KAKE ++RD Y+V +G+ +
Sbjct: 258 RKHTVGVLEPGIAKVEDLLGISNLYESVNTPLISFLNNSIKAKELFKRDRDYVVLDGEVM 317
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A +T Q+ F+LY K+SGMTGTA
Sbjct: 318 IVDEHTGRILSGRRYNEGLHQAIEAKEGVEIKAENQTLATVTLQNYFRLYKKISGMTGTA 377
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
TE EF+ +++PV+ +PTN PNIR D P + + K+E V + G+PVL+
Sbjct: 378 VTEASEFMSTYKLPVVSIPTNKPNIRKDHPDVVYKNEQIKFENLADHVRECYTRGQPVLI 437
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEY+S LL ++G+ H VLNA K A+EA VA+AGR A+T++TNMAGRGTD
Sbjct: 438 GTTSVEKSEYVSKLLSKRGVRHEVLNA--KNHAKEARIVAEAGRLRAVTVATNMAGRGTD 495
Query: 396 IILGGNPKML 405
IILGGNP++L
Sbjct: 496 IILGGNPEVL 505
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 155/346 (44%), Gaps = 71/346 (20%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V GGL VIGT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ +KF+ +
Sbjct: 542 EAEKVIEAGGLMVIGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTDDLMRKFNPGAA 601
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A L +R+ + D IE + R + Q E RK+++++D+VL QR +Y
Sbjct: 602 SA--LAARVPD--DTAIESKLVSRAIRSAQAQVESLNAETRKNVLKYDDVLNRQRAAIYT 657
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R IL G + + ++ ++ ++EII + W D L + I
Sbjct: 658 DRSRILEGGD--IADRVQAFLSDAIEEIINSHA-----VTAWDFDALWADLKTI------ 704
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSD 766
GI SIEEL +
Sbjct: 705 -YPVGI-------SIEELTD---------------------------------------- 716
Query: 767 DLTKNGRYRATTNL-LRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
G R T + +R+ L D A + +ES M+++ER V++ +D WRD
Sbjct: 717 --EAGGMGRITPDFVMREILSD---AKFAYEKRESEIGPESMRDLERKVVLSVIDRCWRD 771
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
HL M L + +R+ R+PL EY+ +G F +M+ R ++
Sbjct: 772 HLYEMEYLKEGIGLRAMAQRDPLVEYQKEGFDMFEAMMGRIREESI 817
>gi|308071081|ref|YP_003872686.1| preprotein translocase subunit SecA [Paenibacillus polymyxa E681]
gi|305860360|gb|ADM72148.1| Preprotein translocase secA subunit [Paenibacillus polymyxa E681]
Length = 816
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/422 (46%), Positives = 279/422 (66%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 81 RHYDVQMLGGIALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSG 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +++ FLG++VGL M ++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQIYNFLGMTVGLNLANMDHAAKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YT+++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKSLNVEEDYTLDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G++ AE +L+D E+ ++ ALKA R DV Y+V +G+ LI+
Sbjct: 258 KSVALTENGVSKAENFFGLENLYDQESVTINHHIVQALKANAIMRLDVDYVVADGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE + +Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKENIIVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN RVD+P + + +GK+ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNRPNQRVDMPDVVYKSVKGKFHAVVDEILERNKKNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG A+TI+TNMAGRGTDI+
Sbjct: 438 VSIENSELLSEMLKRKGVRHKVLNA--KYHAEEAEIISRAGEAGAVTIATNMAGRGTDIV 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 104/167 (62%), Gaps = 7/167 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVSELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F RK ++++D+V+ QR +Y
Sbjct: 555 VLNMMERLGFEEDQPIESRMITRAIESAQKRVEGNNFDQRKVVLQYDDVMNQQRAIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKL 693
R+ +L +E+ + +F ++ V++ ++ + D + P W L+++
Sbjct: 615 RREVLE--SENIKEIVFDMIKPVIERVVEAHCGDDI--PENWELEEV 657
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
++E E+ ++++ +D W DH+ M++L +++R++G +PL EY+ +G F +M+++
Sbjct: 708 VREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHAMIAS 766
>gi|269122195|ref|YP_003310372.1| preprotein translocase subunit SecA [Sebaldella termitidis ATCC
33386]
gi|268616073|gb|ACZ10441.1| preprotein translocase, SecA subunit [Sebaldella termitidis ATCC
33386]
Length = 890
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 287/455 (63%), Gaps = 49/455 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG +LH G IAEMKT ++TVNDYLAQRD
Sbjct: 81 MRHYDVQLIGGMILHSGRIAEMKTGEGKTLMATLAIYLNALSSKGVHIITVNDYLAQRDM 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M ++ FLGLSVG+I G+ EER+ Y DITY N+E GFDYLRDN+ N ++ V
Sbjct: 141 EIMRPLYNFLGLSVGVIINGISNEERKRAYASDITYGTNNEFGFDYLRDNMVHNIKEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R H+AIVDE+DS+LIDE R PL+ISG A + Y V AKV L + +
Sbjct: 201 RL---HHYAIVDEIDSILIDEARTPLIISGAAEETTHWYNVFAKVVLQLKRSVKTEKIKD 257
Query: 152 -------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKA 197
Y V+ K ++V +TE+GI E L +L+ E+ F+ ALKA
Sbjct: 258 KKNTVIPEEDYEDYEVDEKGHNVTMTEKGIKNVEKILNIENLYSPEHVELTHFLAQALKA 317
Query: 198 KEFYRRDVQYIV-RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
KE ++ D YI+ + + +I++E TGR+ E RR+S+G+HQA+EAKE L++ ++ +A I
Sbjct: 318 KELFKLDRDYIINEDDEVIIVDEFTGRLMEGRRYSDGLHQAIEAKENLEVAGENQTLATI 377
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T Q+ F++Y KLSGMTGTAKTEE EF +++++ V+ +PTN P IR D + T R K+
Sbjct: 378 TLQNYFRMYEKLSGMTGTAKTEEDEFKQIYKLGVVAIPTNKPVIRRDFSDVIYITKRAKY 437
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
++++ ++ G+PVLVG+ S++NSE LS LLK+ IPH+VLNA K REAE +AQ
Sbjct: 438 NAIVEKIKELYENGQPVLVGTASIQNSEDLSKLLKKARIPHDVLNA--KQHTREAEIIAQ 495
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIE 411
AGR A+TI+TNMAGRGTDI LGG+P+ LA K E
Sbjct: 496 AGRYKAVTIATNMAGRGTDIKLGGDPESLALKTAE 530
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 4/155 (2%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
++ C +V GGL ++GT HESRRIDNQLRGRAGRQGDPG++ F +SL+D++ +
Sbjct: 544 QIECEENKEKVIAAGGLFILGTERHESRRIDNQLRGRAGRQGDPGASEFYLSLEDDLMRL 603
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F D ++++ + +E I I + + G Q E F IRK+L+E+D++ Q
Sbjct: 604 FGGDRLQ--NMMASLKVEEHEEIRNKFITKAVEGAQKRVESRNFSIRKNLLEYDDINNKQ 661
Query: 641 RKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
R+ VY R +L NE I M+ V+++I
Sbjct: 662 REVVYAQRDLVLR--NEDLKDLIISMMKETVEDLI 694
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
++VER ++++ LD WR++L N+ L + +RS+G +NP+ EYKI + M+
Sbjct: 759 FRDVERYIMLEVLDQRWRENLKNLTELREGIYLRSYGQKNPINEYKIISTDLYNEMIDGI 818
Query: 867 RR 868
+R
Sbjct: 819 KR 820
>gi|297588164|ref|ZP_06946808.1| preprotein translocase subunit SecA [Finegoldia magna ATCC 53516]
gi|297574853|gb|EFH93573.1| preprotein translocase subunit SecA [Finegoldia magna ATCC 53516]
Length = 909
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/451 (45%), Positives = 281/451 (62%), Gaps = 49/451 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+ + VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MKQYRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPAYLNALSGKGVHVVTVNDYLAKRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH FLGL+VG+I G+ +ERR NY CDITY N++ GFDYLRDN+ + V
Sbjct: 139 EWMGKVHEFLGLTVGVIVYGLDNDERRENYACDITYGTNNQYGFDYLRDNMVIYKKDKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R +FAIVDEVDS+LIDE R PL+ISG+ + Y A A L
Sbjct: 199 RG---LNFAIVDEVDSILIDEARTPLIISGQGDESTDMYMRANMFANGLTGRIMDPEEDK 255
Query: 148 ----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALK 196
+ + + V+ K + LTE G AE +L D N+ A + ALK
Sbjct: 256 PDIFDREFKDETVDFLVDEKRKTASLTEIGTKKAEEYFGVENLSDPNNMELAHHINQALK 315
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A +RD+ Y+V++ + LI++E TGR+ E RR+S+G+HQA+EAKEG++++++S +A +
Sbjct: 316 ANNTMKRDIDYVVKDDEILIVDEFTGRIMEGRRYSDGLHQAIEAKEGVEVKSESKTLATV 375
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KLSGMTGTAKTEE EF ++++M V+E+PTN P RVD + + K+
Sbjct: 376 TFQNYFRMYNKLSGMTGTAKTEEAEFNEIYKMDVVEIPTNKPVARVDEQDRVYINENAKF 435
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+E++ + + G+P+LVG+ S+E SE LS LLK+ GI H+VLNA K REAE VAQ
Sbjct: 436 NAIVEEIKEIHKTGQPILVGTISIEVSEKLSKLLKKNGIKHDVLNA--KQHEREAEIVAQ 493
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
AG +TI+TNMAGRGTDI+LGGNP LAK
Sbjct: 494 AGMFDKVTIATNMAGRGTDILLGGNPDFLAK 524
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 11/168 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V +GGL++IGT HESRRIDNQLRGR+GRQGDPG +RF VSL D + + F +T
Sbjct: 575 KVLEVGGLYIIGTERHESRRIDNQLRGRSGRQGDPGKSRFFVSLGDNLMRLFGGETIQKY 634
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ DE P+E I + + Q E FGIRK+++++D+V+ QRK +Y R
Sbjct: 635 AESGKFPEDE--PMEFRTITKAIERAQTKVESNNFGIRKNVLKYDDVMNAQRKVIYTERD 692
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDP-LKHPRY--WSLDKLL 694
+L G + + + + A++ +II +D + P+ W ++ L+
Sbjct: 693 KVLDG------EDMHESIVAMIKDIIANAIDTYCQDPKSENWEMEALM 734
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+E+ER +L+ +D W DH+ M++L + +R+FG ++P+ Y +G F M +
Sbjct: 783 FREIERVILLMVVDRKWMDHIDAMDQLRQGIGLRAFGQQDPVRAYNNEGFEMFEDMNHSI 842
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ TV + + P+E E
Sbjct: 843 KEDTVRGM--FNVQPVEEIE 860
>gi|169344229|ref|ZP_02865211.1| preprotein translocase, SecA subunit [Clostridium perfringens C
str. JGS1495]
gi|169297688|gb|EDS79788.1| preprotein translocase, SecA subunit [Clostridium perfringens C
str. JGS1495]
Length = 840
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGTVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQREDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++GIPH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGIPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 161/349 (46%), Gaps = 70/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 AV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA+++++I V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVITNAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEE--LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
F GD L+K +E+ LP F +L N + R C+
Sbjct: 650 DFEKELGD-LIKYLEDIMLPH------GKFTVEELKTNSN---------EEITRKFIECA 693
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
++ K +E M+E+ER ++++ +D W D
Sbjct: 694 REIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWMD 727
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
H+ +M+ L + +R++ ++P + Y+++G F M++ + TV L
Sbjct: 728 HIDDMDHLKQGIGLRAYKQQDPTQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|386772774|ref|ZP_10095152.1| protein translocase subunit secA [Brachybacterium paraconglomeratum
LC44]
Length = 998
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/439 (48%), Positives = 281/439 (64%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQI+GGA LH G IAEMKT VVTVNDYLA ++
Sbjct: 81 RPYDVQIMGGAALHRGRIAEMKTGEGKTLVATLPAYLNALAGKGVHVVTVNDYLAGYQSD 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV R LGL+ G+I+ GM P ERR Y DITY N+E GFDYLRDN+ + E+ V R
Sbjct: 141 LMGRVFRTLGLTTGVIKSGMTPAERREQYAADITYGTNNEFGFDYLRDNMTLSPEERVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
FAIVDEVDS+LIDE R PL+ISG S D + + AKV L + Y V+ K
Sbjct: 201 G---HFFAIVDEVDSILIDEARTPLIISGPGSGDANKWFSEFAKVVTHLRRDRDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E L ++L++ N P F+ NA+KAKE ++RD Y+V NG+ +I
Sbjct: 258 KRTVGVLESGIDEVEDHLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVLNGEVMI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+KI+A++ +A IT Q+ FKLY KLSGMTGTA+
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVKIKAENQTLATITLQNYFKLYEKLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF+ +++ V+ +PT+ P RVD + + T + K++ +++ G+PVLVG
Sbjct: 378 TEAAEFMNTYKLGVVPIPTHRPMQRVDQADRIYRTEKAKFDAVVEDIVERHEKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SEYLS LL QG+ H VLNA K A EA VA AG K A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSEYLSKLLTAQGVAHEVLNA--KNHAGEAAIVAMAGAKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + +A +E R L
Sbjct: 496 MLGGNVEFMAHAELEKRGL 514
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ + EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD++ + F
Sbjct: 538 VAEQHDEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDDLMR--LF 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
++ A L++R DE +P+ G + + Q S E IRK+++++D+VL QR+
Sbjct: 596 NSGAAESLLARGGVDESIPLTGRMVSGAIQRAQNSIESRNAEIRKNVLKYDDVLTKQRRK 655
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
Y+ R IL G +++ +++ ++E+I G VD
Sbjct: 656 FYEERARILEG------EELDAHIERFIEEVIGGTVD 686
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 868
+++R VL+ +D WR+HL M+ L + +R+ R+PL EY+ +G F M++ +
Sbjct: 760 QLQRRVLLSVMDRRWREHLYEMDYLKEGIGLRAMAQRDPLIEYEREGHLMFNDMMAGVK- 818
Query: 869 LTVESLVQY 877
E +V Y
Sbjct: 819 ---EDVVGY 824
>gi|227499886|ref|ZP_03929979.1| IISP family type II (general) secretory pathway protein SecA
[Anaerococcus tetradius ATCC 35098]
gi|227217995|gb|EEI83268.1| IISP family type II (general) secretory pathway protein SecA
[Anaerococcus tetradius ATCC 35098]
Length = 911
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/478 (44%), Positives = 292/478 (61%), Gaps = 58/478 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ++GG VLH+G IAEMKT VVTVNDYLA+RD
Sbjct: 81 MKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLAKRDQ 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH FLGLSVG I G+ ER+ NY+ DITY N++ GFDYLRDN+ + +V
Sbjct: 141 EWMGKVHTFLGLSVGCIIYGLTNSERKKNYQADITYGTNNQFGFDYLRDNMVTYKDDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R H+AIVDEVDS+LIDE R PL+ISG+ + Y A + + L
Sbjct: 201 R---DLHYAIVDEVDSILIDEARTPLIISGQGDESTDTYVKANEFIQTLEGRILDPNEDA 257
Query: 147 ----------VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNAL 195
V+ + + V+ K + LTE+G A AE ++L D N+ A ++ NAL
Sbjct: 258 DIDPFDREFKVEDVDFLVDEKRKTSNLTEKGTAKAEKFFGIDNLSDTNNIELAHYINNAL 317
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
KA RD+ Y+V +G+ I++E TGR+ + RR+S+G+HQA+EAKEG++++A+S +A
Sbjct: 318 KANTTMTRDIDYVVNHGEVEIVDEFTGRIMQGRRFSDGLHQAIEAKEGVEVKAESKTLAT 377
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KLSGMTGTAKTEE EF +++++ V+E+PTN P R D + RGK
Sbjct: 378 ITFQNYFRMYDKLSGMTGTAKTEEDEFSEIYKLDVVEIPTNRPVQRKDDVDYVYINERGK 437
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ E+ + G+P+LVG+ S+E SE LS LK+ GI H VLNA K REA+ VA
Sbjct: 438 FNAIIDEINRVHATGQPILVGTISIEASERLSAELKKAGITHTVLNA--KNHEREADIVA 495
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSS 433
QAGR +TI+TNMAGRGTDI+LGGN +A + L RE ++ EV ++ S
Sbjct: 496 QAGRLNQVTIATNMAGRGTDIMLGGNVDHMA--------MSRLKREGVSEEVLEQVDS 545
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +VK +GGL++IG+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + +
Sbjct: 575 EAEKVKAVGGLYIIGSERHESRRIDNQLRGRSGRQGDPGKSRFFISLEDDLIR---LNGG 631
Query: 587 WAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
AV + + DE+ PI + + + Q E F RK ++++D+V+ QR +Y
Sbjct: 632 EAVAKFVEKYNYDENEPIVSRLVTKSVERAQTRVEANNFATRKRVLQYDDVMNKQRTIIY 691
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIA 701
+ R+ +L G N + I ++ V+ ++ +P P W + LL +A
Sbjct: 692 NERKEVLYGQN--MKETIIAMIKDVIANAVYTFTNPEVKPENWEMTALLNYLHGLA 745
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 784 YLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
Y+ D +A Y + +ES + M+EVER +L++ +D W DH+ M+++ + VR+ G
Sbjct: 767 YITDATLAKYED--KESSFGPDNMREVERVILLRVIDQKWMDHIDAMDQMRKEIGVRAMG 824
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
+P+ Y +G + M + + TV+ ++
Sbjct: 825 QEDPVRAYTNEGFDMYEDMTRSIQEDTVKYML 856
>gi|313673897|ref|YP_004052008.1| protein translocase subunit seca [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940653|gb|ADR19845.1| protein translocase subunit secA [Calditerrivibrio nitroreducens
DSM 19672]
Length = 865
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 279/436 (63%), Gaps = 45/436 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G+IAEMKT +VTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGYVLHKGAIAEMKTGEGKTLVATLALYLNALEGKGAHLVTVNDYLAKRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRG----------------MIPEERRSNYRCDITYTNNSELGF 81
WM ++ FLGL+VG+IQ+ ++P ER Y DITY N+E GF
Sbjct: 141 LWMGTIYLFLGLTVGVIQQNGSYLVEWDNKEKFTTKLVPCERVDAYAADITYGTNNEFGF 200
Query: 82 DYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK 141
DYLRDN+ + E K +FAIVDEVDS+LIDE R PLLISG V Y K
Sbjct: 201 DYLRDNMKYSLEDYCQ---KNLNFAIVDEVDSILIDEARTPLLISGPTESSVEIYYHIDK 257
Query: 142 VAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEF 200
V L + YTV K+ V+LT EGI+ E + +L+D +N ++ N+LKA
Sbjct: 258 VVRNLSKDTDYTVNEKDKIVKLTYEGISKIEKIMNIENLYDAKNIDLLHYINNSLKAHNL 317
Query: 201 YRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQS 260
+ +DV Y+V+N + +I++E TGR+ RR+S+GIHQA+EAKEG+KI++++ +A IT+Q+
Sbjct: 318 FHKDVDYVVQNSQVVIVDEFTGRLMPGRRYSDGIHQAIEAKEGVKIESENQTLASITFQN 377
Query: 261 LFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYAR 320
F++Y KL+GMTGTA TE +EF++++ + V+ +P N P IRVD P Q + TA+ K++
Sbjct: 378 FFRMYKKLAGMTGTAATEAQEFMEIYGLKVVPIPPNRPMIRVDHPDQIYKTAKEKYDAIL 437
Query: 321 QEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRK 380
+E+ M + GRPVLVG+ S++ SEYLS LL ++ +PH VLNA K+ +EA +A AG K
Sbjct: 438 KEIIEMHKKGRPVLVGTVSIDKSEYLSKLLSKKLVPHQVLNA--KHHEKEASIIANAGAK 495
Query: 381 YAITISTNMAGRGTDI 396
A+TI+TNMAGRGTDI
Sbjct: 496 GAVTIATNMAGRGTDI 511
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 4/125 (3%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKF-SFDTSWA 588
EVK LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F S S+
Sbjct: 516 EVKNLGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDDLLRIFGSEKISFI 575
Query: 589 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
+D ++ E PIE I + + Q E +F IRK L+E+D V+ QR+ VY LR
Sbjct: 576 MD---KLGMKEGEPIEHPLINKAIENAQKKVEGLHFEIRKHLLEYDNVMNQQRQIVYGLR 632
Query: 649 QSILT 653
+SIL+
Sbjct: 633 KSILS 637
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
V R V++ TLD W++HL+ M+ L +V +R +G ++PL EYK + F M+ RR+
Sbjct: 724 VIRFVMINTLDSKWKEHLLTMDHLRDSVGLRGYGQKDPLIEYKKESFNIFTDMM---RRI 780
Query: 870 TVESLVQYWSSPMESQE 886
E+ + ++S+E
Sbjct: 781 YYETTELVYHVQLKSEE 797
>gi|296138809|ref|YP_003646052.1| preprotein translocase subunit SecA [Tsukamurella paurometabola DSM
20162]
gi|296026943|gb|ADG77713.1| preprotein translocase, SecA subunit [Tsukamurella paurometabola
DSM 20162]
Length = 917
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/440 (46%), Positives = 282/440 (64%), Gaps = 29/440 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+G LH G IAEMKT +VT NDYLA+RDA+WM
Sbjct: 81 YHVQIMGAGALHQGDIAEMKTGEGKTLTSVMAAYANALTGDGVHLVTTNDYLAKRDADWM 140
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
RVHRFLGL V I G P+ RR Y DITY N+E GFDYLRDN+A + ++LV R
Sbjct: 141 GRVHRFLGLEVDCILSGQDPDRRRQAYAADITYGTNNEFGFDYLRDNMAHSVDELVQRG- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
++AIVDEVDS+LIDE R PL+ISG A Y A++ + + +HY V+++ +
Sbjct: 200 --HNYAIVDEVDSILIDEARTPLIISGPADGSSKWYTEFARIVPQMEKDVHYEVDIRKKT 257
Query: 161 VELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ + E G+ L E L ++L+D N ++ NA+KAKE Y RD YIVR+G+ LI++E
Sbjct: 258 IGVNEAGVELVEDQLGIDNLYDSANSLLVSYLNNAIKAKELYERDKDYIVRSGEVLIVDE 317
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGRV RR++EG+HQA+EAKEG++IQA++ +A IT Q+ F+LY KLSGMTGTA+TE
Sbjct: 318 FTGRVLAGRRFNEGMHQALEAKEGVEIQAENQTLATITLQNYFRLYDKLSGMTGTAETEA 377
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
E +++++ VI +PTN P IR D + T K+ ++ G+PVL+G+TS
Sbjct: 378 AELHQIYKLGVIPIPTNKPMIRKDQTDLIYKTEEAKFAAIVDDIAERHEAGQPVLIGTTS 437
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SEYLS L+++ I H VLNA K+ +EA +A+AG A+T++TNMAGRGTD++LG
Sbjct: 438 VERSEYLSRQLEKRKIKHTVLNA--KFHEQEAAIIAKAGTPGAVTVATNMAGRGTDVVLG 495
Query: 400 GNPKMLAKKIIEDRLLLLLT 419
GNP +LA + +R L +T
Sbjct: 496 GNPDILADLALRERGLDPVT 515
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 174/357 (48%), Gaps = 73/357 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDT-- 585
G +V+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL DE+ ++F+
Sbjct: 539 GDKVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAQIE 598
Query: 586 SWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
+W ++R+ +D+PI+ + R + Q E+ F IRK+++++D+V QRK +Y
Sbjct: 599 AW----MNRVNLPDDVPIDNKFVSRAIRSAQTQVEQQNFEIRKNVLKYDDVQNEQRKVIY 654
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDKLLKEFIAIAG 702
D R+ IL+G + +F + + D+++ VD Y W LD+L
Sbjct: 655 DERRKILSG------EDLFDQVNHMTDDVVSAYVDGATATGYVEDWDLDELW-------- 700
Query: 703 KILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLA 762
E L L I+++ W
Sbjct: 701 -------------------EALRTLYPIELD--------------------------WKK 715
Query: 763 ICSDDLTKNG-RYRATTNLLRKYLGDILIASYLNVVQ--ESRYDDVYMKEVERAVLVKTL 819
+ +D +NG R T + LR L D + +Y + E+ + M++VER+VL+ L
Sbjct: 716 VVGED--ENGDRDEITRDELRTVLLDDIHDAYDKHQERIETAAGEGTMRQVERSVLLSVL 773
Query: 820 DCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQ 876
D WR+HL M+ L + +R R+P+ EY+ +G F ML + +V +L +
Sbjct: 774 DQKWREHLYEMDYLKEGIGLRQIAQRDPVVEYQREGFDMFNGMLEGLKEESVATLFK 830
>gi|303235159|ref|ZP_07321779.1| preprotein translocase, SecA subunit [Finegoldia magna BVS033A4]
gi|302493751|gb|EFL53537.1| preprotein translocase, SecA subunit [Finegoldia magna BVS033A4]
Length = 909
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/451 (45%), Positives = 282/451 (62%), Gaps = 49/451 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+ + VQ+IGG VLH G IAEMKT VVTVNDYLA+RD
Sbjct: 79 MKQYRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALSGKGVHVVTVNDYLAKRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH FLGL+VG+I G+ +ERR NY CDITY N++ GFDYLRDN+ + V
Sbjct: 139 EWMGKVHEFLGLTVGVIVYGLDNDERRENYACDITYGTNNQYGFDYLRDNMVIYKKDKVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
R +FAIVDEVDS+LIDE R PL+ISG+ + Y A A L
Sbjct: 199 RG---LNFAIVDEVDSILIDEARTPLIISGQGDESTDMYMRANMFANGLTGRIMDPEEDK 255
Query: 148 ----------QGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALK 196
+ + + V+ K + LTE G AE +L D N+ A + ALK
Sbjct: 256 PDIFDREFKDETVDFLVDEKRKTASLTEVGTRKAEEYFGVENLSDPNNMELAHHINQALK 315
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A +RD+ Y+V++ + LI++E TGR+ E RR+S+G+HQA+EAKEG++++++S +A +
Sbjct: 316 ANNTMKRDIDYVVKDDEILIVDEFTGRIMEGRRYSDGLHQAIEAKEGVEVKSESKTLATV 375
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KLSGMTGTAKTEE EF ++++M V+E+PTN P RVD + + K+
Sbjct: 376 TFQNYFRMYNKLSGMTGTAKTEEAEFNEIYKMDVVEIPTNKPVARVDEQDRVYINENAKF 435
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+E++ + + G+P+LVG+ S+E SE LS+LLK+ GI H+VLNA K REAE VAQ
Sbjct: 436 NAIVEEIKEIHKTGQPILVGTISIEVSEKLSNLLKKNGIKHDVLNA--KQHEREAEIVAQ 493
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAK 407
AG +TI+TNMAGRGTDI+LGGNP +AK
Sbjct: 494 AGMFDKVTIATNMAGRGTDILLGGNPDFMAK 524
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 11/168 (6%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V +GGL++IGT HESRRIDNQLRGR+GRQGDPG +RF VSL D + + F +T
Sbjct: 575 KVLEVGGLYIIGTERHESRRIDNQLRGRSGRQGDPGRSRFFVSLGDNLMRLFGGETIQKY 634
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ DE P+E I + + Q E FGIRK+++++D+V+ QRK +Y R
Sbjct: 635 AESGKFPEDE--PMEFRTITKAIERAQTKVESNNFGIRKNVLKYDDVMNAQRKVIYTERD 692
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDP-LKHPRY--WSLDKLL 694
+L G + + + + A++ +II +D + P+ W ++ L+
Sbjct: 693 KVLDG------EDMHESIVAMIKDIISNAIDTYCQDPKSENWEMEALM 734
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 767 DLTKNGRYRATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWR 824
DLT+ Y +K D +I L V +E +E+ER +L+ +D W
Sbjct: 747 DLTRLNSYN------KKTFTDYVIQKALEVYNAKEEAIGKEKFREIERVILLMVVDRKWM 800
Query: 825 DHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMES 884
DH+ M++L + +R+FG ++P+ Y +G F M + + TV + + P+E
Sbjct: 801 DHIDAMDQLRQGIGLRAFGQQDPVRAYNNEGFEMFEDMNHSIKEDTVRGM--FNVQPVEE 858
Query: 885 QE 886
E
Sbjct: 859 IE 860
>gi|408356031|ref|YP_006844562.1| preprotein translocase subunit SecA [Amphibacillus xylanus NBRC
15112]
gi|407726802|dbj|BAM46800.1| preprotein translocase SecA subunit [Amphibacillus xylanus NBRC
15112]
Length = 835
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 273/430 (63%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQ++G VLH G IAEMKT ++TVN+YLA RDA
Sbjct: 79 MRPYPVQLMGAIVLHGGDIAEMKTGEGKTLASTMPAYLNALTGEGVHIITVNEYLADRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M + RFLGL+VGL M E+R+ Y+ DITY N+E GFDYLRDN+ EQ+V
Sbjct: 139 REMGELFRFLGLTVGLNVNSMNKTEKRAAYQADITYGTNNEFGFDYLRDNMVLYKEQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAI+DEVDS+LIDE R PL+ISG A K A Y A L + + YT ++K
Sbjct: 199 R---PLNFAIIDEVDSILIDEARTPLIISGSARKSAALYQQANTFVRTLKKEVDYTYDVK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V+L+EEGI AE ++L+D N + ALKA RD+ Y+V+ GK +I
Sbjct: 256 TKGVQLSEEGITKAENFFNVDNLFDLNHVTLTHHINQALKAHVSMHRDMDYVVKEGKVVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ E RR+S+G+HQA+EAKEGL IQ +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 316 VDQFTGRLMEGRRYSDGLHQAIEAKEGLPIQNESMTLASITFQNYFRMYNKLAGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V +PTN P +R D P + T GK+ +++ + G+PVLVG
Sbjct: 376 TEEEEFRNIYNMNVFAIPTNKPVVRNDRPDLIYKTMEGKFNAVVADIKERNKKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S LLK+ G+ HNVLNA+ + REAE + AG K+A+TI+TNMAGRGTDI
Sbjct: 436 TVAVETSELISKLLKKAGVKHNVLNAKNHF--REAEIIENAGEKFAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 494 KLGEGVKELG 503
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 11/171 (6%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +S++D++ ++F D
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSMEDDLMRRFGSDNMK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PIE + + + Q E F RK+++ +D+VL QR+ +Y
Sbjct: 556 A--MMDRLNMDDSQPIESKMVSKAVESSQKRVEGNNFDARKNVLAYDDVLREQREVIYQQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPL---KHPRYWSLDKLLK 695
R +L S+ ++ + +++E++ VD + W LD L++
Sbjct: 614 RYDVLN------SENLYDVVIGMIEEVVNDTVDMYTSDEDREAWDLDALIE 658
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 42/59 (71%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ ++++T+D W DH+ +M++L +++R++G +PL EY+++G F +M+ +
Sbjct: 707 MREFEKVIVLRTVDTKWMDHIDSMDQLRQGIHLRAYGQNDPLNEYQMEGFAMFEAMVQS 765
>gi|386715364|ref|YP_006181687.1| preprotein translocase subunit SecA [Halobacillus halophilus DSM
2266]
gi|384074920|emb|CCG46413.1| preprotein translocase subunit SecA [Halobacillus halophilus DSM
2266]
Length = 838
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQ+ G LH+G+IAEMKT ++TVNDYLA RDA
Sbjct: 80 MRPFKVQLDGAIALHEGNIAEMKTGEGKTLASTMPAYLNALTEKGVHIITVNDYLASRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M + FLGL+VGL GM +E+R Y DITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 KDMGELFNFLGLTVGLNLNGMAKDEKREAYLADITYGTNNEFGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAI+DEVDS+LIDE R PL+ISG ASK Y A LL Q +T + K
Sbjct: 200 R---PLHFAIIDEVDSILIDEARTPLIISGTASKSADLYQSANSFVRLLEQEEDFTYDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V+LTEEGI AE + +L+D N + ALKA RD Y+V G+ +I
Sbjct: 257 TKNVQLTEEGINKAERFFKIENLFDLSNVSLIHHINQALKAHTSMHRDTDYVVDEGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+LF++Y KLSGMTGTAK
Sbjct: 317 VDQFTGRLMKGRRYSDGLHQAIEAKEGLEIQNESMTLASITFQNLFRMYEKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EFL ++ M VI +PTN +R D + T+ GK++ ++++ G+PVLVG
Sbjct: 377 TEEEEFLNIYNMRVIVIPTNREIVRDDKADLVYKTSDGKFKAVVEDIKERHEKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S LK+ G+PHNVLNA+ + REAE + AG++ A+TI+TNMAGRGTDI
Sbjct: 437 TVAVETSEIISRYLKKAGVPHNVLNAKNHF--REAEIIENAGQRGAVTIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 KLG 497
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V GGL VIGT HESRRIDNQLRGR+GRQGDPG ++F ++ DE+ ++F+ D
Sbjct: 497 GDGVVEAGGLAVIGTERHESRRIDNQLRGRSGRQGDPGMSQFYLATDDELMRRFASDNIR 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PIE I R + Q E F RK+++ +D+VL QR+ +Y
Sbjct: 557 S--MMDRLGMDDSQPIESKMISRAVESAQKRVEGNNFDARKTILSYDDVLRQQREVIYKQ 614
Query: 648 RQSILTGAN 656
R +LT N
Sbjct: 615 RYDVLTSDN 623
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M+E E+ +L++T+D W DH+ M++L +++R++G +PL EY+ +G F +M+
Sbjct: 708 MREFEKVILLRTVDQKWMDHIDQMDQLRQGIHLRAYGQNDPLREYQFEGFGMFETMVG 765
>gi|339319562|ref|YP_004679257.1| preprotein translocase subunit SecA [Candidatus Midichloria
mitochondrii IricVA]
gi|338225687|gb|AEI88571.1| preprotein translocase subunit SecA [Candidatus Midichloria
mitochondrii IricVA]
Length = 867
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 286/453 (63%), Gaps = 43/453 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG +LH G IAEMKT +VTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGIILHHGKIAEMKTGEGKTLVATAPVYLNALTGLGVHIVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +V+ FLGLSVG I G EER+S Y DITY N+E GFDYLRDNL + QLV
Sbjct: 141 LWMGKVYEFLGLSVGCITSGSSDEERKSAYLADITYGTNNEFGFDYLRDNLKYSIGQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYT---V 154
R P ++AIVDEVDS+LIDE R PL+ISG + Y K +Q L T +
Sbjct: 201 RPP---NYAIVDEVDSILIDEARTPLIISGSITDQSKLYQQIDKA----IQQLDRTDIDI 253
Query: 155 ELKNNSVELTEEGIALAEMAL-------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQ 206
+ K+ +V LTE G E+ L + L+D EN + ALKA +++DV
Sbjct: 254 DEKSKTVNLTEPGHHNIELILKKLGIIKDQCSLYDLENMTVVHHLNQALKAHNLFKKDVD 313
Query: 207 YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYP 266
YIV++GK +II+E TGR+ + RR++EG+HQA+EAKE +KIQ ++ +A +T+Q+ F++YP
Sbjct: 314 YIVKDGKIMIIDEFTGRIMDGRRYAEGLHQAIEAKEKVKIQNENQTLASVTFQNYFRMYP 373
Query: 267 KLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESM 326
KL+GMTGTA TE EF ++ + V+E+PTN+ R+D + + TA K+E E+ +
Sbjct: 374 KLAGMTGTAMTEANEFSDIYGLEVVEIPTNVKVARIDEEDEIYKTAEEKYEAILGEIRKV 433
Query: 327 FRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIS 386
+ G+P+LVG+ S+E SE LS LL + I HNVLNAR Y +EA+ +AQAG+ AITI+
Sbjct: 434 HKRGQPILVGTVSIEKSELLSSLLTKHDIKHNVLNAR--YHEQEAKIIAQAGKIGAITIA 491
Query: 387 TNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLT 419
TNMAGRGTDI+LGGN ++ I R L L T
Sbjct: 492 TNMAGRGTDIMLGGNAAATVEQGISPRDLELET 524
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V +GGL VIGT HESRRIDNQLRGRAGRQGD G T+F +SL D++ + F + A
Sbjct: 533 KVLEVGGLLVIGTERHESRRIDNQLRGRAGRQGDVGRTKFFLSLDDDLLRIFGSEKISA- 591
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+++R+ I I R L Q E + IRK+L++FD+V++ QRK +Y R
Sbjct: 592 -MLTRLGLQRGEAIVHPWITRSLEKAQQRVEMRNYEIRKNLLKFDDVVDEQRKVIYAQRI 650
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
I+ N + Q + +++V + +I + + W +D L K I G +D
Sbjct: 651 EIMKDNNLLPTLQ--EIIKSVNESLIEAYIQKKAYEEEWDIDSLEKALQRIYGIHID 705
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 814 VLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVES 873
V + TLD WR+HL +++ L +++R++ ++PL EYK++ R F SML+ L V
Sbjct: 751 VFLHTLDQLWREHLHSLDNLRGGISLRAYAQKDPLNEYKVEAFRMFGSMLAELDELIVSR 810
Query: 874 LVQ 876
Q
Sbjct: 811 CSQ 813
>gi|345015638|ref|YP_004817992.1| protein translocase subunit secA [Streptomyces violaceusniger Tu
4113]
gi|344041987|gb|AEM87712.1| Protein translocase subunit secA [Streptomyces violaceusniger Tu
4113]
Length = 950
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 286/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 WMGRVHQFLGLEVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
++AIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNYAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLSRGQAAEPQKGV 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVGIHESGVTKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVMDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEAVEIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PT+ P R+D + T K++ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTHRPLSRIDQSDLIYRTEVAKFDAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+PVLVG+TSVE SEYLS L ++G+PH VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHTKGQPVLVGTTSVEKSEYLSQQLAKRGVPHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 9/185 (4%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAEAAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVD-----EIIFGNVDPLKHPRYWS 689
EVL QR+ +Y R+ +L G E+ Q+ +M ++ E + G + R WS
Sbjct: 657 EVLNRQREVIYGERRRVLEG--ENLQDQVGHFMDDTIEAYVRAETVEGFAEEWDMDRLWS 714
Query: 690 LDKLL 694
K L
Sbjct: 715 AFKQL 719
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|317487782|ref|ZP_07946375.1| preprotein translocase [Eggerthella sp. 1_3_56FAA]
gi|325831790|ref|ZP_08164979.1| preprotein translocase, SecA subunit [Eggerthella sp. HGA1]
gi|316913057|gb|EFV34573.1| preprotein translocase [Eggerthella sp. 1_3_56FAA]
gi|325486459|gb|EGC88909.1| preprotein translocase, SecA subunit [Eggerthella sp. HGA1]
Length = 927
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/439 (46%), Positives = 279/439 (63%), Gaps = 29/439 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG L+DG IAEMKT VVTVNDYLA+RD+
Sbjct: 80 LRHFDVQLIGGMALNDGQIAEMKTGEGKTLVSTLAGYLNALPGNNVHVVTVNDYLARRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+RFLG+ VGLIQ GM P+++ Y+ D+TY NSE GFDYLRDN+ +E V
Sbjct: 140 EWMGQVYRFLGMEVGLIQNGMRPDKKIPAYKADVTYGTNSEFGFDYLRDNMVTRAEARVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFAIVDEVDS+LIDE R PL+ISG ++ Y A+V LV + ++
Sbjct: 200 RG---HHFAIVDEVDSILIDEARTPLIISGAGTQAAETYNKFARVMVGLVPEADFDMDEA 256
Query: 158 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ TE G+ E L +D++ D + + ALKA+ + RDV Y+V NG+ I
Sbjct: 257 KKTINATESGLEKIEAMLGIDDIYADPSGQLPNHLQQALKAQFLFHRDVDYVVVNGEVKI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+SEG+HQA+EAKE + ++ ++ +A IT Q+ F+LY KLSGMTGTA
Sbjct: 317 VDEFTGRIMEGRRYSEGLHQALEAKERVLVREENQTLATITLQNYFRLYEKLSGMTGTAM 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE+ EF +++++PV+ +P N P R D + T K+ +V + G+P L+G
Sbjct: 377 TEDAEFREIYKLPVVAIPPNRPVARKDEDDLIYRTVEAKFNAVADDVAERNKAGQPCLIG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E+SE LS LL ++GI H LNA K REA +AQAGR A+TI+TNMAGRGTDI
Sbjct: 437 TVSIESSEKLSRLLDKRGIKHETLNA--KNHEREAHIIAQAGRVGAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGNP +LA ++ +R L
Sbjct: 495 LLGGNPDVLADDVLRERGL 513
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 9/156 (5%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
C+ E +V GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +SL+D++ + F
Sbjct: 547 CAEEHDQVIAAGGLTVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSLEDDLMRLFGG 606
Query: 584 DTSWAVDLISRITND----EDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEV 639
+ +D I+R+ EDMPI+ + + + G Q E +F RK+++E+D+V+ +
Sbjct: 607 NR---MDSIARMMEKTDMPEDMPIQAGMVSKAIEGAQRQVESMHFAARKNVLEYDDVMNL 663
Query: 640 QRKHVYDLRQSILTGA--NESCSQQIFQYMQAVVDE 673
QR +Y R +IL G +E + I ++AVV E
Sbjct: 664 QRVAIYSERNAILDGKDMDERIPEIIGDAVEAVVAE 699
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
MK +E V+++ +D W HL M+ L + + +R+FG R+PL EYK + F ++ +
Sbjct: 766 MKMLEGQVMLRMIDTRWMAHLQEMDYLKAGIGLRAFGQRDPLVEYKNEAYNAFQNLTAG 824
>gi|291445125|ref|ZP_06584515.1| preprotein translocase subunit secA [Streptomyces roseosporus NRRL
15998]
gi|291348072|gb|EFE74976.1| preprotein translocase subunit secA [Streptomyces roseosporus NRRL
15998]
Length = 939
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 285/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQMMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL+VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHKFLGLTVGCIVANMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F +
Sbjct: 551 EFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDDLMRLFK---A 607
Query: 587 WAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
V+ + + N +D+PIE + R + Q E+ F RK+++++DEVL QR+ +Y
Sbjct: 608 QMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYDEVLNRQREVIY 667
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L G E QI +M +D+ I W LD+L F
Sbjct: 668 GERRRVLEG--EDLQDQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRLWGAF 716
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|269794271|ref|YP_003313726.1| protein translocase subunit secA [Sanguibacter keddieii DSM 10542]
gi|269096456|gb|ACZ20892.1| protein translocase subunit secA [Sanguibacter keddieii DSM 10542]
Length = 931
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/439 (48%), Positives = 281/439 (64%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEMKT VVTVNDYLA+ +E
Sbjct: 81 RHFDVQLMGGAALHLGNIAEMKTGEGKTLVATLPAYLNALSGEGVHVVTVNDYLAKYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV RFLGLS G I G P ERR Y DITY N+E GFDYLRDN+A +++ LV R
Sbjct: 141 IMGRVFRFLGLSTGCILSGQTPAERREQYAKDITYGTNNEFGFDYLRDNMAWSTDDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+FA+VDEVDS+LIDE R PL+ISG AS D + Y A+V L Y V+ K
Sbjct: 201 G---HNFAVVDEVDSILIDEARTPLIISGPASGDTNKWYGEFARVVRRLTVDEDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GIA E L ++L++ N P F+ NA+KAKE ++RD Y+V G+ LI
Sbjct: 258 KRTVGVLEPGIAKVEDYLGIDNLYESLNTPLIGFLNNAIKAKELFKRDKDYVVIKGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ I+A++ +A IT Q+ F+LY KL GMTGTA
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVAIKAENQTLATITLQNYFRLYSKLGGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ V+ +PTN R+D P + + K++ +++ G+PVLVG
Sbjct: 378 TEAAEFQGTYKLGVVPIPTNRIMQRIDQPDLIYKSENAKFDAVVEDIVERHAAGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE L+ LK+QG+PH VLNA K REA VA AGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSELLASKLKKQGVPHEVLNA--KQHEREASIVALAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGN + LA ++ R L
Sbjct: 496 MLGGNAEFLAIADLKTRGL 514
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 7/185 (3%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L+ + ++E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +S QD
Sbjct: 530 ALEAAKKAVADEHDEVAELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSTQD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F ++ A ++ R + DMP+E + R + Q E F IRK+++++D+
Sbjct: 590 DLMRLFG--SALAESMMQRFPD--DMPLESKIVTRGIASAQGQVESRNFEIRKNVLKYDD 645
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
VL QR +YD R+ +L G E ++QI +++ V+ + G HP W LD L
Sbjct: 646 VLSRQRSVIYDERRRVLDG--EDMAEQIQHFLKDVLTAYVAGAT-AAGHPDSWDLDGLWT 702
Query: 696 EFIAI 700
A+
Sbjct: 703 ALKAV 707
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 787 DILIASYLNVVQ------ESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVR 840
D+++A L+ Q E+ + M+++ER V++ LD WR+HL M+ L + +R
Sbjct: 730 DLILAEVLSDAQHAYTSRETELGESNMRQLERRVVLSVLDRKWREHLYEMDYLKEGIGLR 789
Query: 841 SFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ R+PL EY+ +G F +M A + +V
Sbjct: 790 AMAQRDPLVEYQREGFLLFQAMTEAIKEESV 820
>gi|386386040|ref|ZP_10071245.1| preprotein translocase subunit SecA [Streptomyces tsukubaensis
NRRL18488]
gi|385666500|gb|EIF90038.1| preprotein translocase subunit SecA [Streptomyces tsukubaensis
NRRL18488]
Length = 941
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 81 RHYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + E+LV R
Sbjct: 141 MMGRVHKFLGLDVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQEELVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 201 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTRGEPGNHLKGI 257
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE ++ D
Sbjct: 258 EETGDYEVDEKKRTVGIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKNDK 317
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 318 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 377
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R+D + T K+ ++
Sbjct: 378 GKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRMDQSDLIYRTEVAKFAAVVDDIAE 437
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGR+ A+T+
Sbjct: 438 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREASIVAQAGRRGAVTV 495
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 496 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 525
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
E E EV+ LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ +
Sbjct: 546 EEAVRTEFEEVRSLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDDLMRL 605
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F V ++ + + D+PIE + R + Q E+ F RK ++++DEVL Q
Sbjct: 606 FKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFTTRKDVLKYDEVLSRQ 663
Query: 641 RKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDKLLKEF 697
R+ +Y R+ +L G E QI +M +D I V+ W LD+L F
Sbjct: 664 REVIYGERRRVLEG--EDLHDQIRHFMDDTIDAYIRAETVEGFAEE--WDLDRLWGAF 717
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 769 MRELERRVVLSVLDRKWREHLYEMDYLQDGIGLRAMAQKDPLVEYQREGFDMFTAMMEGI 828
Query: 867 RRLTV 871
+ +V
Sbjct: 829 KEESV 833
>gi|365133733|ref|ZP_09342932.1| preprotein translocase, SecA subunit [Subdoligranulum sp.
4_3_54A2FAA]
gi|363614906|gb|EHL66380.1| preprotein translocase, SecA subunit [Subdoligranulum sp.
4_3_54A2FAA]
Length = 917
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/448 (46%), Positives = 280/448 (62%), Gaps = 47/448 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ++GG VLH IAEMKT VVTVNDYLA+RD+
Sbjct: 79 MKHFPVQVVGGIVLHRACIAEMKTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLAKRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++++FLGLSVGLI G+ EERR+ Y DITY N+E GFDYLRDN+ EQ+V
Sbjct: 139 EWMGKLYKFLGLSVGLIIHGVTGEERRAAYNADITYGTNNEFGFDYLRDNMVTYKEQMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R ++AIVDEVDS+LIDE R PL+ISGE K Y +A A+ L
Sbjct: 199 RG---HYYAIVDEVDSILIDEARTPLIISGEGDKSTDLYKLADNFAKGLKATVVAELDDK 255
Query: 147 ------VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKE 199
V G Y V+ K + LT GIA AE +L D N + A+KA+
Sbjct: 256 EDQDEQVDG-DYVVDEKKKTATLTASGIAKAEKYFNVENLADGANMTLQHHINQAIKARG 314
Query: 200 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 259
+RDV Y+VR+G+ +I++E TGR+ RR++EG+HQA+EAKEG+ + +S +A IT+Q
Sbjct: 315 VMKRDVDYVVRDGEVIIVDEFTGRLMLGRRYNEGLHQAIEAKEGVTVARESRTLATITFQ 374
Query: 260 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 319
+ F++Y KLSGMTGTA+TE EF +++ + V+EVPTN P R D + T K+
Sbjct: 375 NYFRMYEKLSGMTGTAQTEAAEFEEIYGLQVVEVPTNKPVARTDYNDVVYKTEPAKFNAV 434
Query: 320 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 379
+++ G+PVLVG+ S+E SE LS LL ++G+ H VLNA K+ +EAE VAQAG+
Sbjct: 435 IEQIIECHEKGQPVLVGTISIEKSELLSKLLSRRGVKHEVLNA--KHHEKEAEIVAQAGK 492
Query: 380 KYAITISTNMAGRGTDIILGGNPKMLAK 407
K A+TI+TNMAGRGTDI+LGGN + +AK
Sbjct: 493 KGAVTIATNMAGRGTDIMLGGNAEHMAK 520
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 164/347 (47%), Gaps = 78/347 (22%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGRAGRQGDPG++RF +SL+D++ + F + + +
Sbjct: 576 GGLFIIGTERHESRRIDNQLRGRAGRQGDPGASRFFISLEDDLMRLFGGERVSTI--MDS 633
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ +EDMPIE I + Q E F IRK++++FD+V+ QR+ +Y R +L G
Sbjct: 634 LGVEEDMPIENKMISGTIENAQKKLEARNFSIRKNVLQFDDVMNSQREIIYGQRGKVLRG 693
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
+ + + + ++ E I N + +AG++ DD
Sbjct: 694 ------EDVSENVHTMIHESIAANAQ-----------------LFLAGEVADDWD----- 725
Query: 715 DTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRY 774
F G+R S + WLA K+G +
Sbjct: 726 --------------------------------FDGLR---SHYRGWLA-------KDGDF 743
Query: 775 RATTNLLRKYLGDILI------ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLI 828
R T L + + ++ A + +E RY M+E ER VL++T+D W +H+
Sbjct: 744 RYTPEALGELKQEDVVKVLTDRADAICADKEKRYGSPLMREFERVVLLRTVDTKWMEHID 803
Query: 829 NMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
M L + +RS+G R+P+ EY+I+G F M+++ R T L+
Sbjct: 804 AMEELRKGIYLRSYGQRDPVVEYRIEGFNMFDEMVASIREDTSRMLL 850
>gi|309777857|ref|ZP_07672803.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
3_1_53]
gi|308914418|gb|EFP60212.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
3_1_53]
Length = 782
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 281/431 (65%), Gaps = 30/431 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+G +H G IAEMKT VVTVNDYLA RDAEWM
Sbjct: 82 YKVQIMGAVAMHQGDIAEMKTGEGKTLTSTMCVYLNALSGKGVHVVTVNDYLAGRDAEWM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++RFLGL+VG+ R + P ++R + CDITYT NSELGFDYLRDN+ + + V+R
Sbjct: 142 GQIYRFLGLTVGVNSRPLTPAQKREAFNCDITYTTNSELGFDYLRDNMVTDVKDRVLRG- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
H AIVDEVDS+L+DE R PL+ISG A K Y A A+ L +G Y ++ K
Sbjct: 201 --LHVAIVDEVDSILVDESRTPLIISGGAKKTANLYLQADAFAKRL-KGDDYEIDEKTRQ 257
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ L+E+G+++AE + +L+D ++ + ALKA + +V+Y+V++ + +I+++
Sbjct: 258 IMLSEKGVSVAERYFKIKNLYDVDHTQLVHHITQALKANYIMKNEVEYVVQDDEIVIVDQ 317
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR R +S+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F+LY KL+GMTGTAKTEE
Sbjct: 318 FTGRTMPGRAYSDGLHQAIEAKEGVSIKEETSTLATITYQNFFRLYDKLAGMTGTAKTEE 377
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EFL ++ M VIE+PTN P R+D P FA R K+ +EV+ ++ G+PVLVG+ S
Sbjct: 378 EEFLDIYNMRVIEIPTNKPVQRIDYPDAIFANPRLKFAALVREVKELYEKGQPVLVGTIS 437
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE + +LLK++ IPH VLNA K AREAE +A+AGR ++TI+TNMAGRGTDI L
Sbjct: 438 VETSELVHELLKKERIPHEVLNA--KNHAREAEIIAKAGRPKSVTIATNMAGRGTDIKLT 495
Query: 400 GNPKMLAKKII 410
+ L ++
Sbjct: 496 DESRALGGLVV 506
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E + LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VSL+DE+ +F D +
Sbjct: 497 ESRALGGLVVLGSERHESRRIDNQLRGRSGRQGDPGFSRFYVSLKDELMIRFGGDKFEKL 556
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ D IE + + + Q E Y + +RK L+++D+VL QR+ +Y+ R
Sbjct: 557 -----FESMGDAQIESKMVTKSISQAQKRVEGYNYDVRKQLLDYDDVLRKQREIMYEQRN 611
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
+L N+ + + V+D ++ NVD +H
Sbjct: 612 FVL--ENDDVHGIVRDMIDRVIDSVVDANVDHTRH 644
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 783 KYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSF 842
KY + + Y + +++ R + K+ E+ ++++ +D W +H+ M++L + +++RS+
Sbjct: 683 KYCAEKIFTLYDDKIKDIRDE---FKQFEKTIVLRNMDRNWIEHIDIMDKLRNGIHLRSY 739
Query: 843 GHRNPLEEYKIDGCRFFISMLSATRRLTV 871
NPL+ Y +G F M + R V
Sbjct: 740 AQNNPLQAYIQEGYDMFEEMQARIAREVV 768
>gi|298529199|ref|ZP_07016602.1| preprotein translocase, SecA subunit [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510635|gb|EFI34538.1| preprotein translocase, SecA subunit [Desulfonatronospira
thiodismutans ASO3-1]
Length = 838
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 275/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT +VTVNDYLA+RDA
Sbjct: 80 MRHFDVQLIGGIVLHQGRIAEMKTGEGKTVVATLPVVLNALTGRGVHIVTVNDYLARRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGL VG++ GM E+RR Y DITY N+E GFDYLRD++ + QLV
Sbjct: 140 EWMGRLYNFLGLDVGVVVHGMSDEDRRQAYAADITYGTNNEFGFDYLRDHMKFYAYQLVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R FAIVDEVD +LIDE R PL+ISG A V Y + L + H+ ++ K
Sbjct: 200 R---DLQFAIVDEVDCILIDEARTPLIISGPADISVDLYARMNSMVPKLKKDEHFNIDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTEEG+ E L +L+D EN + V+ ALKA + RD +YIV++G+ +I
Sbjct: 257 AKTVTLTEEGVHRVENILGLENLYDPENITYQHHVLQALKAHHLFGRDSEYIVKDGQVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+ +G+HQA+EAKEG+K++A++ +A IT+Q+ F+LY KL+GMTGTA
Sbjct: 317 VDEFTGRLMPGRRFGDGLHQALEAKEGVKVEAENQTLASITFQNYFRLYDKLAGMTGTAD 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V +PT+ P IR DLP + T + K+ ++ + G+PVLVG
Sbjct: 377 TEAVEFKEIYNLDVSVIPTHKPMIREDLPDVVYKTQQEKFNAIADDLLELHSRGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE+LS LL ++ +PH VLNA K+ REAE VA+AG +T++TNMAGRGTDI
Sbjct: 437 TTSIEKSEHLSKLLNKREVPHEVLNA--KHHEREAEIVARAGEMGRVTLATNMAGRGTDI 494
Query: 397 ILG 399
+LG
Sbjct: 495 VLG 497
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF ++L D + + F +
Sbjct: 497 GEGVRELGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFYLALDDSLLRLFG--SER 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ ++ PIE + I R + Q E + F IRK L++FD+V+ QR +Y
Sbjct: 555 ITGMMDKLGMEDGQPIENNMISRAIENAQTKVEAHNFNIRKQLLDFDDVMNQQRTVIYTQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEI 674
R+ ++ E + +Q V+D++
Sbjct: 615 RRELMHA--EKLEDYVLDMIQDVLDDV 639
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+EV R L+++LD W++HL+ M+ L + +R +G R+P EYK +G F +L +
Sbjct: 705 EEVLRFFLLESLDRNWKEHLLQMDHLKQGIGLRGYGQRDPKREYKREGYELFEELLFRIK 764
Query: 868 RLTVESLVQYWSSPMESQELF 888
V +L + E E F
Sbjct: 765 ENVVRALCRLRIRKKEEVEGF 785
>gi|365840059|ref|ZP_09381273.1| preprotein translocase, SecA subunit [Anaeroglobus geminatus F0357]
gi|364562798|gb|EHM40630.1| preprotein translocase, SecA subunit [Anaeroglobus geminatus F0357]
Length = 831
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/435 (47%), Positives = 280/435 (64%), Gaps = 31/435 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEM+T VVTVNDYLA RD+
Sbjct: 81 MRHFDVQLLGGIVLHRGDIAEMRTGEGKTLVATLPVYLNALSGKGAHVVTVNDYLATRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +V++FLGLSVGLI + E+R Y D+TY N+E GFDYLRDN+ + EQ+V
Sbjct: 141 EEMGQVYKFLGLSVGLIVHDLNYEQRHRAYAADVTYGTNNEFGFDYLRDNMVISKEQMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG K Y A + + L YT++ K
Sbjct: 201 R---PLHYCIVDEVDSILIDEARTPLIISGPGEKSTDLYYTLAAIVKRLTPE-DYTMDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ T+ G+A E L ++++D E+ V+ AL+A RD Y+V++G+ +I
Sbjct: 257 QKTIAPTDSGVAKVEKMLGIDNMFDNEHLDLNHLVIQALRANFMMHRDKDYVVKDGEIVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQ++EAKE +K+Q +S +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 VDEFTGRLMFGRRYSDGLHQSIEAKENVKVQGESKTLATITFQNYFRMYKKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF K++++ V +PTN P+IR DLP + T K+ +EVE G+P+LVG
Sbjct: 377 TEEDEFNKIYKLDVYVIPTNRPSIRKDLPDVIYKTKNAKYRAVVREVEKRHATGQPILVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+ SE +S LLK++ I HNVLNA KY +EAE + AG+K +TI+TNMAGRGTDI
Sbjct: 437 TTSINQSEIISRLLKEKNIVHNVLNA--KYHEKEAEIIKDAGQKNTVTIATNMAGRGTDI 494
Query: 397 ILG-GNPKMLAKKII 410
LG G P+M II
Sbjct: 495 KLGEGVPEMGGLMII 509
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 12/171 (7%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGDPGST+F +SL+D++ + F D
Sbjct: 497 GEGVPEMGGLMIIGTERHESRRIDNQLRGRSGRQGDPGSTQFYLSLEDDLMRIFGADNIS 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ +ED PIE I + + Q E + F IRK ++E+D+V+ QR+ +Y
Sbjct: 557 R--FMDKLGMEEDEPIEHSMITKSIEKAQKKVEAHNFEIRKYVLEYDDVMNQQREVLYAQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV----DPLKHPRYWSLDKLL 694
R+ +LT ++S + I ++D+II + + +P W LL
Sbjct: 615 RRKVLT--SDSLKETIL----GMIDDIILDGLTIYANEKLYPEEWDFAGLL 659
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+E+A++++ +D W DHL M+ L +N+R++G +NP+ EYK + F M+ +
Sbjct: 709 MRELEKAIMLRVVDSKWMDHLDAMDALKEGINLRAYGQKNPIVEYKFEAYEMFEEMVESI 768
Query: 867 RRLTVESL 874
+R V L
Sbjct: 769 KRTVVTFL 776
>gi|261415857|ref|YP_003249540.1| Preprotein translocase subunit SecA [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385790742|ref|YP_005821865.1| Preprotein translocase subunit SecA [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372313|gb|ACX75058.1| preprotein translocase, SecA subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326700|gb|ADL25901.1| preprotein translocase, SecA subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 992
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/422 (47%), Positives = 276/422 (65%), Gaps = 28/422 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M FDVQ+IGG VLH+G+IAEM T VVTVNDYLA RDA
Sbjct: 145 MLPFDVQMIGGLVLHEGAIAEMATGEGKTLAAALPVYLNGLSGHGVHVVTVNDYLAGRDA 204
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M V++FLGL+VGLI G+ E+RR +Y D+TY N+E GFDYLRDN+A QLV
Sbjct: 205 KQMGLVYKFLGLTVGLIVNGLDAEQRRQSYNSDVTYGTNNEFGFDYLRDNMAVEPNQLVQ 264
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +F IVDEVDS+LIDE R PL+ISG A +Y A ++A+ LV+ ++V+ K
Sbjct: 265 R---ELNFCIVDEVDSILIDEARTPLIISGPAEDATEKYAKANEIAKQLVKNKDFSVDEK 321
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
+ +++ TE+G+ + + +L+ E+ W F+ NAL+A + +DV YIVR+G+ +I+
Sbjct: 322 DKNIQFTEKGVLHIQDLMHITNLYGEHADWVHFLDNALRAWYLFEKDVDYIVRDGEIIIV 381
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ E RR+S GIHQA+EAKEG++I+ ++ +A IT+Q+ F++Y KLSGMTGTA+T
Sbjct: 382 DENTGRLMEGRRYSNGIHQAIEAKEGVQIRRENQTLATITFQNYFRMYKKLSGMTGTAET 441
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E EF+K++ M +PTN P IR DL + + KW E++ G+P+LVG+
Sbjct: 442 EATEFIKIYNMNTWVIPTNKPCIRKDLQDLVYKSEDAKWRAIVAEIKERHAKGQPLLVGT 501
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+E SE L +L+++GIPH VLNA K REAE + AG K +TI+TNMAGRGTDI
Sbjct: 502 ASIEKSEILHGMLEKEGIPHEVLNA--KNHGREAEIIQYAGHKDKVTIATNMAGRGTDIA 559
Query: 398 LG 399
LG
Sbjct: 560 LG 561
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLHV+GT HESRRIDNQLRGR+GRQGDPGS+++ +SL D + + F D
Sbjct: 561 GPGVTELGGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQYFLSLDDNLMRIFGGDN-- 618
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L++R ED I + R + G Q E F IRK L+++D V+ QRK +Y L
Sbjct: 619 VKNLMNRFGVGEDEVITHPIVSRSIRGAQRRVESQSFDIRKHLLDYDNVMNEQRKVIYGL 678
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK-HPRYWSLDKLLKEFIAIAGKILD 706
R+ IL G E +I ++ D I N P K + W+L+ L ++ + L
Sbjct: 679 RRRILNG--EDIRDEIMNRIEDACD-IKVSNYIPAKSYAEQWNLEGLHEDL----QRTLG 731
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPK--PPNLFRGIRRK 753
++ D + K+ E++ E I++ + L K P FR I R+
Sbjct: 732 MEYSLTLDDAVSKTPEQVLE-EIINLCKVRYDKLTKIIPDADFRNIERR 779
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 801 RYD-------DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKI 853
RYD D + +ER L+ T+D W++HL M++L A+ + ++PL YK
Sbjct: 760 RYDKLTKIIPDADFRNIERRFLLMTIDQVWKEHLYAMDQLKDAIRFHGYAQKDPLMVYKN 819
Query: 854 DGCRFFISMLSATRRLTV 871
DG + F S + LT
Sbjct: 820 DGFKMFESCMEKIATLTA 837
>gi|227550025|ref|ZP_03980074.1| preprotein translocase subunit SecA [Corynebacterium
lipophiloflavum DSM 44291]
gi|227077871|gb|EEI15834.1| preprotein translocase subunit SecA [Corynebacterium
lipophiloflavum DSM 44291]
Length = 847
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/428 (46%), Positives = 278/428 (64%), Gaps = 29/428 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
+H+ VQ++GGA LH GS+AEMKT +VTVNDYLA+RDAE
Sbjct: 80 KHYRVQVMGGAALHFGSVAEMKTGEGKTLTSVLPAYLNGLEGKGVHIVTVNDYLAKRDAE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH FLGL VG+I M P ER+ Y DITY N+ELGFDYLRDN+ ++ +V R
Sbjct: 140 MMGRVHHFLGLDVGVILSEMRPPERKKAYAADITYGTNNELGFDYLRDNMTRSTADMVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
++AIVDEVDS+LIDE R PL+ISG + + V A++A + +G+HY V+ +
Sbjct: 200 G---HNYAIVDEVDSILIDEARTPLIISGPVDGSIQFFTVFAQLAPRMREGIHYEVDKRK 256
Query: 159 NSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
++ +TEEG+ E L ++L+ E+ ++ NA+KAKE + RD YI+R G+ LI+
Sbjct: 257 RTIGVTEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAKELFERDKDYIIRKGEVLIV 316
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+ TGRV RR++EG+HQA+EAKE ++I+ ++ +A +T Q+ F+LY KL+GMTGTA+T
Sbjct: 317 DSFTGRVLAGRRYNEGMHQAIEAKENVEIKNENQTLATVTLQNYFRLYHKLAGMTGTAET 376
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
E E +++ + V+ VP N PN RVD + T K+ ++ G+PVLVG+
Sbjct: 377 EAAELHQIYGLDVVAVPPNKPNQRVDRDDLVYKTQEAKFAAVADDIAEHVANGQPVLVGT 436
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
TSVE SEYLS LL ++G+ HNVLNA K+ E +A+AG +T+STNMAGRGTDI+
Sbjct: 437 TSVERSEYLSQLLTRKGVKHNVLNA--KHHEEEGRIIAEAGLPGKVTVSTNMAGRGTDIV 494
Query: 398 LGGNPKML 405
LGGNP++L
Sbjct: 495 LGGNPEVL 502
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 171/351 (48%), Gaps = 65/351 (18%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G EV++ GGL+VIGT HESRRIDNQLRGR+GRQGDPG TRF +S++DE+ +F T
Sbjct: 540 GDEVRKAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGETRFYLSMRDELMVRFVGQTME 599
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++R+ +D+PIE + + G Q E F +RK+++++DEVL QRK VY
Sbjct: 600 --NMMNRLNVPDDVPIEAKMVSNAIKGAQSQVENQNFEMRKNVLKYDEVLNEQRKVVYRE 657
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVD-EIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKI 704
RQ IL G + + + I + A VD + G V+ W LD+L
Sbjct: 658 RQEILGGKDIKDQIRRMITDTVGAYVDGATVEGYVED------WDLDELF--------NA 703
Query: 705 LDDLFA-GISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAI 763
LD L+ ++ L+ E +P L G R+ A+
Sbjct: 704 LDSLYGPSVTPQQLIDGSE-----------------YGRPGELTAGQLRE--------AL 738
Query: 764 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 823
+D +Y D L A+ + E++ +V ER V++ +D W
Sbjct: 739 VAD---AQAQY------------DSLEANVAAIGGEAQMRNV-----ERMVILPVIDTKW 778
Query: 824 RDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
R+HL M+ L + +R+ R+PL EY+ +G F +M A + TV L
Sbjct: 779 REHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFHAMEEAVQEETVRQL 829
>gi|116623581|ref|YP_825737.1| protein translocase subunit SecA [Candidatus Solibacter usitatus
Ellin6076]
gi|122253472|sp|Q01Y13.1|SECA_SOLUE RecName: Full=Protein translocase subunit SecA
gi|116226743|gb|ABJ85452.1| protein translocase subunit secA [Candidatus Solibacter usitatus
Ellin6076]
Length = 963
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 285/449 (63%), Gaps = 47/449 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHKGKIAEMKTGEGKTLVATLPCYLNALGGQGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R+++FLGL VG+I + +ER+ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 EWMGRLYKFLGLRVGVIVHDLDDQERKDAYNADITYGTNNEFGFDYLRDNMKFRIDDCVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R +FAIVDEVDS+LIDE R PL+ISG + + +Y ++ LV+G
Sbjct: 201 RV---HNFAIVDEVDSILIDEARTPLIISGPSEESTDKYYKINRIIPKLVRGEVIDGKEP 257
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYR 202
YT++ K+ S LTEEG+ E L +L+D +N W V AL+A Y+
Sbjct: 258 GEKYTTGDYTIDEKHKSSALTEEGVLKLEKLLNIGNLYDPQNIEWNHHVQQALRAHVLYQ 317
Query: 203 RDVQYIVRNG----KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
RD +Y++R+G + +I++E TGR+ RRWS+G+HQAVEAKEG+KIQ ++ +A IT+
Sbjct: 318 RDREYVIRDGDEGPEVVIVDEFTGRLMPGRRWSDGLHQAVEAKEGVKIQRENQTLATITF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F++Y KL+GMTGTA+TE EF K++++ V+ +PTN IR + + T K+
Sbjct: 378 QNYFRMYKKLAGMTGTAETEAAEFYKIYKLEVVVIPTNRSMIRKENTDMVYRTEIEKFRN 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
A +E++ G+PVLVG+ SVE SE+LS +LK+ G+ H VLNA K REA V+QAG
Sbjct: 438 AAKEIKEYNAKGQPVLVGTISVEKSEHLSGILKKLGVKHEVLNA--KNHEREAGIVSQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAK 407
RK A+T+STNMAGRGTDI+LGGN + + K
Sbjct: 496 RKNAVTVSTNMAGRGTDILLGGNAEFMTK 524
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 122/207 (58%), Gaps = 5/207 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
+ K+ + + E EV LGGLH++ T HESRRIDNQLRGRAGRQGDPGS+RF +SLQD
Sbjct: 569 IYKENKAYTDKEHDEVVELGGLHIVATERHESRRIDNQLRGRAGRQGDPGSSRFYLSLQD 628
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F + +L+ R+ +ED+PIE I +++ Q + E F RK L+E+D+
Sbjct: 629 DLLRIFGGERMQ--NLMLRLGMEEDVPIESKLITKRIQKAQEAVEAQNFEARKHLLEYDD 686
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 695
V QR+ VY LR+ +L G E Q++ + +Q ++++ I KHP W + L
Sbjct: 687 VNNKQRQTVYGLRRQLLEG--EDQKQRVMEMVQGIIEQYIDMRCPDAKHPDNWEMGDLRN 744
Query: 696 EFIAIAGKILD-DLFAGISGDTLLKSI 721
+ + G +D + A +S + + +I
Sbjct: 745 DILTQFGYKIDLNELASLSREEMTNTI 771
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
+++ ER V+++ +D W+DHL++M+ L + R++G ++PL EYK + F +M+
Sbjct: 791 IRQTERIVMLQVIDNQWKDHLLSMDELKQGIGNRAYGQKDPLVEYKKESYELFTAMMDRI 850
Query: 867 RRLTVESL 874
TV L
Sbjct: 851 EDETVRYL 858
>gi|92114303|ref|YP_574231.1| protein translocase subunit secA [Chromohalobacter salexigens DSM
3043]
gi|122419696|sp|Q1QVH6.1|SECA_CHRSD RecName: Full=Protein translocase subunit SecA
gi|91797393|gb|ABE59532.1| protein translocase subunit secA [Chromohalobacter salexigens DSM
3043]
Length = 912
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 279/443 (62%), Gaps = 50/443 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G IAEMKT VVTVNDYLA RDA
Sbjct: 81 MRHFDVQMVGGMTLHEGRIAEMKTGEGKTLVGTLAVYLNALTGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG I G ++R Y CDITY N+E GFDYLRDN+A + + V
Sbjct: 141 EWMRPLYEFLGLSVGTIFSGQSSTQKREAYACDITYGTNNEFGFDYLRDNMAFSLDDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ--------- 148
R H+AI+DEVDS+LIDE R PL+ISG ++V Y ++ +L VQ
Sbjct: 201 R---SLHYAIIDEVDSILIDEARTPLIISGPVEENVDMY---RRINQLSVQLEECSDEED 254
Query: 149 --GLHYTVELKNNSVELTEEG-------IALAEMALETNDLWD-ENDPWARFVMNALKAK 198
+ ++ K VELTE G + AEM + + L+ +N + V +AL+A+
Sbjct: 255 PTSGDFILDEKQKQVELTETGHQKLEGLLRDAEMLGQDDSLYSAQNLGLLQHVHSALRAR 314
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y RDV YIV NG+ +I++E TGR RRWSEG+HQAVEAKEG+ IQ +S +A T+
Sbjct: 315 HLYHRDVDYIVANGEVVIVDEHTGRTMHGRRWSEGLHQAVEAKEGVTIQKESQTLASTTF 374
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F+LY KLSGMTGTA TE EF +++ + V+ +PTN P +RVD + + K+E
Sbjct: 375 QNYFRLYDKLSGMTGTADTEAFEFRQIYGLDVMVIPTNRPLVRVDHNDLVYMSGEEKFEA 434
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
++V++ GRPVLVG+ S+E SEYL+ L++Q IPHNVLNA+ + EAE ++QAG
Sbjct: 435 IIEDVKTQREAGRPVLVGTASIETSEYLAKLMQQHQIPHNVLNAKQHQS--EAEIISQAG 492
Query: 379 RKYAITISTNMAGRGTDIILGGN 401
R A+TI+TNMAGRGTDI+LGGN
Sbjct: 493 RPGAVTIATNMAGRGTDIVLGGN 515
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLHVIG+ HESRRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+
Sbjct: 549 GGLHVIGSERHESRRIDNQLRGRAGRQGDPGSTRFFLSLEDNLMRLFGSDRVQR--LMQA 606
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + IE + + Q E F IRK L+E+D+V QR+ VY R +L
Sbjct: 607 LGLEHGEAIEHKMVSNAVERAQKKVEGRNFDIRKQLLEYDDVSNDQRRVVYQQRDEVL-- 664
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 697
A + S I + + V+ E I V P W L D L +EF
Sbjct: 665 AADDLSSNIAEIREQVLSEAISSYVPPQSLAEQWDLPGLQDYLKQEF 711
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
M+ E+ V+++ LD W++HL +M+ L +++R + +NP +EYK + F ++L
Sbjct: 756 MRRFEKQVMLQVLDTRWKEHLQHMDHLRRGIHLRGYAQKNPKQEYKREAFELFQALLG 813
>gi|18311153|ref|NP_563087.1| preprotein translocase subunit SecA [Clostridium perfringens str.
13]
gi|81849171|sp|Q8XIF0.1|SECA_CLOPE RecName: Full=Protein translocase subunit SecA
gi|18145836|dbj|BAB81877.1| preprotein translocase subunit [Clostridium perfringens str. 13]
Length = 840
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQRQDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++G+PH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGVPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 70/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+V + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 SV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA+++++I V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVITNAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEE--LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
F GD L+K +E+ LP F +L N + R C+
Sbjct: 650 DFEKELGD-LIKYLEDIMLPH------GKFTVEELKTNSN---------EEITRKFIECA 693
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
++ K +E M+E+ER ++++ +D W D
Sbjct: 694 REIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWMD 727
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
H+ +M+ L + +R++ ++P++ Y+++G F M++ + TV L
Sbjct: 728 HIDDMDHLKQGIGLRAYKQQDPIQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|122956541|sp|Q0SR11.1|SECA_CLOPS RecName: Full=Protein translocase subunit SecA
Length = 840
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 79 MKHYREQLIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 139 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 199 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 256 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 316 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 376 TEETEFREIYGLDVVVIPTHRPVQRQDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++G+PH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 436 TTSIEKSEYLSSLLKKKGVPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 70/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 496 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 556 AV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA+++++I V A G I +D
Sbjct: 614 RSQVLEGENLEDS------VQAMIEDVITNAVQ------------------AHLGNIDED 649
Query: 708 LFAGISGDTLLKSIEE--LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
F GD L+K +E+ LP F +L N + R C+
Sbjct: 650 DFEKELGD-LIKYLEDIMLPH------GKFTVEELKTNSN---------EEITRKFIECA 693
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
++ K +E M+E+ER ++++ +D W D
Sbjct: 694 REIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWMD 727
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
H+ +M+ L + +R++ ++P++ Y+++G F M++ + TV L
Sbjct: 728 HIDDMDHLKQGIGLRAYKQQDPIQAYQMEGSAMFDEMINNIKIDTVRYL 776
>gi|365854481|ref|ZP_09394555.1| preprotein translocase, SecA subunit [Acetobacteraceae bacterium
AT-5844]
gi|363720131|gb|EHM03421.1| preprotein translocase, SecA subunit [Acetobacteraceae bacterium
AT-5844]
Length = 913
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/439 (48%), Positives = 287/439 (65%), Gaps = 39/439 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQMIGGQVLHSGRIAEMKTGEGKTLVATLAVYLNALPAKGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ +LGL+ G + G+ EERR+ Y D+TY N+E GFDYLRDN+ +++V
Sbjct: 141 EQMGRLYGWLGLTTGCVVHGLTDEERRAAYAADVTYGTNNEFGFDYLRDNMKYRLDEMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA--SKDVARYPVAAKVAELLVQGLHYTVE 155
R F +AIVDEVDS+L+DE R PL+ISG + S D+ R V V EL+ +Y +
Sbjct: 201 R---DFSYAIVDEVDSILVDEARTPLIISGPSDDSSDLYRR-VDVVVKELVKTKENYDKD 256
Query: 156 LKNNSVELTEEGIALAEMAL------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYI 208
K S LTE+G E AL E +L+D +N V AL+A + RDV YI
Sbjct: 257 EKQRSASLTEQGAETVEQALRDVGLLEEGNLYDAQNITLVHHVNQALRAHVLFARDVDYI 316
Query: 209 V-RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK 267
V R GK +II+E TGR+ E RR+S+G+HQA+EAKEG+++Q ++ +A IT+Q+ F++YPK
Sbjct: 317 VNREGKLVIIDEFTGRMMEGRRYSDGLHQALEAKEGVEVQPENQTLASITFQNYFRMYPK 376
Query: 268 LSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMF 327
LSGMTGTA TE EF +++++ V+E+PTNLP IR D + + +AR K+E V+
Sbjct: 377 LSGMTGTAATEADEFAEIYKLEVVEIPTNLPVIRKDSDDEVYRSAREKYEAVATLVQEAQ 436
Query: 328 RLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIST 387
+PVLVG+TS+E SE +S LL ++G+PH VLNAR Y +EA VAQAG+ A+TI+T
Sbjct: 437 ARQQPVLVGTTSIEKSELISALLTKKGVPHKVLNAR--YHEQEAGIVAQAGQPGAVTIAT 494
Query: 388 NMAGRGTDIILGGNPKMLA 406
NMAGRGTDI LGGN +M+A
Sbjct: 495 NMAGRGTDIKLGGNVEMMA 513
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
VK GGL VIGT HESRRIDNQLRGR+GRQGDPG++RF +SL+D++ + F D
Sbjct: 544 VKAAGGLFVIGTERHESRRIDNQLRGRSGRQGDPGASRFFLSLEDDLMRIFGSDRMGG-- 601
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ ++ E I I R L Q E F RK+L+++D+V+ QRK VY R++
Sbjct: 602 MLEKLGLKEGEAIIHPWINRALEKAQKKVEARNFDTRKNLLKYDDVMNDQRKEVYAQRRA 661
Query: 651 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKE 696
+ + S+ I + + VD ++ + +P W ++ L K+
Sbjct: 662 FMQA--QDVSETIEEMRREAVDAMVARAIPENAYPDQWDVEGLQKQ 705
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ VE+++L++ D W++HL+N++ L + +R++ R+PL EYK + F +L
Sbjct: 754 MRMVEKSLLLQVFDAVWKEHLLNLDHLRQGIGLRAYAQRDPLNEYKSEAFALFSGLLDEL 813
Query: 867 R 867
R
Sbjct: 814 R 814
>gi|302544915|ref|ZP_07297257.1| preprotein translocase, SecA subunit [Streptomyces hygroscopicus
ATCC 53653]
gi|302462533|gb|EFL25626.1| preprotein translocase, SecA subunit [Streptomyces himastatinicus
ATCC 53653]
Length = 932
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 286/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 111 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 170
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 171 WMGRVHKFLGLEVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQDELVQR 230
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 231 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVLRLSRGEAANLQKGQ 287
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 288 EETGDYEVDEKKRTVGIHESGVTKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 347
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKE ++I+ ++ +A IT Q+ F+LY
Sbjct: 348 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEQVEIKDENQTLATITLQNFFRLY 407
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PT+ P RVD + T K++ ++
Sbjct: 408 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTHRPLARVDQSDLIYRTEVAKFDAVVDDIVE 467
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+PVLVG+TSVE SEYLS L ++G+PH VLNA K REA VAQAGRK A+T+
Sbjct: 468 KHEKGQPVLVGTTSVEKSEYLSQQLAKRGVPHEVLNA--KQHDREATIVAQAGRKGAVTV 525
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 526 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 555
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 570 AALEKAEAAVKAEFEEVKDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 629
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 630 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 687
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDKL 693
EVL QR+ +Y R+ +L G E +QI +M +D I V+ W LD+L
Sbjct: 688 EVLNRQREVIYGERRRVLEG--EDLQEQIGHFMDDTIDAYIQAETVEGFAEE--WDLDRL 743
Query: 694 LKEF 697
F
Sbjct: 744 WGAF 747
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 799 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMEGI 858
Query: 867 RRLTV 871
+ +V
Sbjct: 859 KEESV 863
>gi|384086051|ref|ZP_09997226.1| protein translocase subunit secA [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 918
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/431 (47%), Positives = 277/431 (64%), Gaps = 35/431 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG +LH+G IAEM+T V+TVNDYLA RDA
Sbjct: 81 MRHYDVQLIGGYMLHEGKIAEMRTGEGKTLVATLPAYLNALSGKGVHVITVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+W+ ++H FLGLSVG I + E+RR+ Y DITY N+E GFDYLRDN+A + V
Sbjct: 141 QWVAKIHNFLGLSVGTIISDLATEDRRAAYAADITYGTNNEFGFDYLRDNMAFSPADRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+LIDE R PL+ISG ++ Y K+ V YTV+ K
Sbjct: 201 R---GLHYAIIDEVDSILIDEARTPLIISGPTEENTDLYFRVDKLVGQFVVEEDYTVDEK 257
Query: 158 NNSVELTEEGIA-----LAEMALETND-LWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
V LTEEGI +AE L T D L+D N + AL+A Y R+ YIVR
Sbjct: 258 AKQVMLTEEGIEKAERLMAEHGLLTEDNLYDLANVTLVHHLNQALRAHVIYHRETDYIVR 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+G+ I++E TGR+ RRWS+G+HQAVEAKEG+++Q ++ +A IT+Q+ F++Y KLSG
Sbjct: 318 DGEVCIVDEFTGRMMTGRRWSDGLHQAVEAKEGVEVQNENQTLASITFQNYFRMYDKLSG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE E +++ + V+ +PT+ P R+D+ + TA+ KW +++ + G
Sbjct: 378 MTGTADTEAFELNQIYNLEVVVIPTHKPVRRLDMADLIYRTAQEKWTAIVEDIRDCHQRG 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+TS+E++E+LS LLKQ IPH VLNA K REAE +AQAG A+TI+TNMA
Sbjct: 438 QPVLVGTTSIEHNEFLSHLLKQAKIPHEVLNA--KQHQREAEIIAQAGTPGAVTIATNMA 495
Query: 391 GRGTDIILGGN 401
GRGTDI+LGGN
Sbjct: 496 GRGTDIVLGGN 506
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 163/347 (46%), Gaps = 65/347 (18%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLH+IGT HESRR+DNQLRGR+GRQGDPG+TRF + L+D + + F D L+ +
Sbjct: 547 GGLHIIGTERHESRRVDNQLRGRSGRQGDPGTTRFYLCLEDPLMRIFGSDRLGG--LMQK 604
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ E IE + + + + E F IRK L+E+D+V QRK +Y R + +
Sbjct: 605 LGMKEGEAIEHPWVTKSIENARRKVESRNFDIRKQLLEYDDVANEQRKIIYQQRNAFMDA 664
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
N V +EI +LL+E +LD + A +
Sbjct: 665 DN-------------VSEEI-----------------QLLRE------DVLDAVLADHTP 688
Query: 715 DTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRY 774
+++ ++P L S + + + P +++WL +L K Y
Sbjct: 689 AGVMEEEWDVPGLESA-LQRVFGLEAP---------------VEQWL-----ELDKRLNY 727
Query: 775 RATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLS 834
LR + ++ SY +E+ + E++++++ LD W+DHL +M+ L
Sbjct: 728 EG----LRSKVMGLVQTSYAE--KEALMGSEMARHFEKSIMLQVLDSQWKDHLASMDHLR 781
Query: 835 SAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
+++R + +NP +EYK + F SML+ R + +L + SP
Sbjct: 782 EGIHLRGYAQKNPKQEYKKESLAMFNSMLARMREEVISTLSRLHVSP 828
>gi|258676975|ref|YP_699446.2| preprotein translocase subunit SecA [Clostridium perfringens SM101]
gi|255926552|gb|ABG86973.2| preprotein translocase, SecA subunit [Clostridium perfringens
SM101]
Length = 845
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ Q+IGG VLH G IAEMKT V+TVNDYLA RD
Sbjct: 84 MKHYREQLIGGIVLHQGRIAEMKTGEGKTLVATLPVYLNAIAGKGVHVITVNDYLATRDK 143
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +++ FLGL+ G+I G+ ++RR Y DITY N+E GFDYLRDN+ E+ V
Sbjct: 144 EWMGQLYEFLGLTTGVIVHGLTNDQRREAYNADITYGTNNEFGFDYLRDNMVIYKEERVQ 203
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+ IVDEVDS+LIDE R PL+ISG SK Y +A + L + YT++ K
Sbjct: 204 R---PLHYCIVDEVDSILIDEARTPLIISGAGSKSTDLYKIADFFVKKLREEEDYTIDEK 260
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
++ LT++G+A AE A + D N+ + ALKA +RD Y+V++ + I
Sbjct: 261 AHAAMLTDKGVAEAEKAFGIENYADANNMELQHHITQALKANYVMKRDKDYMVKDDEIAI 320
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKEG+K+Q +S +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 321 VDEFTGRLMEGRRYSDGLHQAIEAKEGVKVQRESKTLATITFQNYFRMYTKLAGMTGTAL 380
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + V+ +PT+ P R D F TA+GK++ +E+ + G+PVLVG
Sbjct: 381 TEETEFREIYGLDVVVIPTHRPVQRQDHSDLVFKTAKGKYDAIVEEIIETHKTGQPVLVG 440
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEYLS LLK++G+PH VLNAR Y +EAE V+ AG ITI+TNMAGRGTDI
Sbjct: 441 TTSIEKSEYLSSLLKKKGVPHKVLNAR--YHEQEAEIVSHAGELGNITIATNMAGRGTDI 498
Query: 397 ILG 399
LG
Sbjct: 499 KLG 501
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 70/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V +GGL +IGT HESRRIDNQLRGR+GRQGD G +RF +SL+D++ + F +
Sbjct: 501 GEGVLEVGGLKIIGTERHESRRIDNQLRGRSGRQGDKGHSRFYISLEDDLMRIFGSEKLQ 560
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
AV + R+ +E IE + + + Q E F IRK+L+ +D+V+ QR+ +Y
Sbjct: 561 AV--VDRLGLEETEAIESKMVTKSIENAQKKVEGNNFDIRKTLLGYDDVMNKQREVIYKQ 618
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G N S +QA+++++I V A G I +D
Sbjct: 619 RSQVLEGENLEDS------VQAMIEDVITNAVQ------------------AHLGNIDED 654
Query: 708 LFAGISGDTLLKSIEE--LPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICS 765
F GD L+K +E+ LP F +L N + R C+
Sbjct: 655 DFEKELGD-LIKYLEDIMLPH------GKFTVEELKTNSN---------EEITRKFIECA 698
Query: 766 DDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
++ K +E M+E+ER ++++ +D W D
Sbjct: 699 REIYKE--------------------------KEEFVGSEQMREIERVIILRVVDTKWMD 732
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
H+ +M+ L + +R++ ++P++ Y+++G F M++ + TV L
Sbjct: 733 HIDDMDHLKQGIGLRAYKQQDPIQAYQMEGSAMFDEMINNIKIDTVRYL 781
>gi|328954399|ref|YP_004371733.1| protein translocase subunit secA [Desulfobacca acetoxidans DSM
11109]
gi|328454723|gb|AEB10552.1| Protein translocase subunit secA [Desulfobacca acetoxidans DSM
11109]
Length = 840
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 283/423 (66%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR FDVQ+IGG VLH+G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRPFDVQLIGGIVLHEGKIAEMKTGEGKTLVAVLPVYLNALTGLGVHVVTVNDYLARRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++RFLGLSVG+I G+ ++RR Y D+TY N+E GFDYLRDN+ + E V
Sbjct: 141 EWMGGIYRFLGLSVGVIVHGLNDDQRRQAYDADVTYGTNNEFGFDYLRDNMKFSLEDYVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++AIVDEVDS+LIDE R PL+ISG A + Y +V +L + YTV+ K
Sbjct: 201 R---EFNYAIVDEVDSILIDEARTPLIISGPAEESTELYHRINRVGNMLQRDKDYTVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+ +V LTE G+ AE + ++L+D N + +LKA +++DV YIV++G+ +I
Sbjct: 258 SRAVVLTEAGVGRAEKIMNLDNLYDPFNIEILHHLNQSLKAHALFKKDVDYIVKDGQVII 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG++I+ ++ +A IT+Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEFTGRLMPGRRYSDGLHQALEAKEGVRIENENQTLASITFQNYFRMYQKLAGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF K++ + V+ VPT+ IRVD P + + K++ +E++ + G+PVLVG
Sbjct: 378 TEAEEFKKIYNLEVMVVPTHKRMIRVDHPDAIYKSESEKFQAVVEEIKDCHQQGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SE LS +LK QGI H VLNA K+ +EA+ VAQAG+ +TI+TNMAGRGTDI
Sbjct: 438 TTSIEKSERLSRMLKAQGIKHEVLNA--KHHEKEAQIVAQAGQSGMVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 4/166 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G+ V GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +SL+D++ + F D
Sbjct: 498 GTGVVDRGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLLRIFGSDR-- 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+L+ R+ ++ PIE + + Q E + F IRK L+E+D V+ QR+ +Y
Sbjct: 556 IKNLMGRLGMEDGQPIEHRMVSSAIERAQKRVEAHNFDIRKHLLEYDNVMNKQREVIYGK 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
R+ IL G E ++I Q +VD ++ DP P W L L
Sbjct: 616 RREILGG--EDLEEEIQQMAADMVDGLLVQFTDPRTMPEDWDLKGL 659
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 39/69 (56%)
Query: 806 YMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
Y +++ ++++ +D W+DHL+ M+ L + +R + +PL Y+ +G F+ M+
Sbjct: 709 YFPSLQQQIMLQMVDTHWKDHLLAMDHLRDGIGLRGYAQVDPLRAYQKEGYDMFMEMMQR 768
Query: 866 TRRLTVESL 874
+ TV ++
Sbjct: 769 IQENTVRTI 777
>gi|381152054|ref|ZP_09863923.1| preprotein translocase, SecA subunit [Methylomicrobium album BG8]
gi|380884026|gb|EIC29903.1| preprotein translocase, SecA subunit [Methylomicrobium album BG8]
Length = 905
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 280/438 (63%), Gaps = 42/438 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+DVQ+IGG +LHDG IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHYDVQLIGGMILHDGKIAEMKTGEGKTLMATLAAYLNALPGRGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLG++ G+I M + RR +Y CDITY N+E GFDYLRDN+A + E+ V
Sbjct: 141 EWMGRLYGFLGMTTGVIVSQMDYDVRRQSYACDITYGTNNEFGFDYLRDNMAFSLEEKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R HFAIVDEVDS+LIDE R PL+ISG + + Y A + L +
Sbjct: 201 R---ELHFAIVDEVDSILIDEARTPLIISGPSEESSEIYIKANAIIPYLTKQEKEHGPGD 257
Query: 152 YTVELKNNSVELTEEGIALAE-------MALETNDLWD-ENDPWARFVMNALKAKEFYRR 203
Y+V+ K V LTEEG E + +E + L+D N ++ +L+A +++
Sbjct: 258 YSVDEKTRQVHLTEEGHERVERLMVEHGLMMEDSSLYDASNIRLMHYLSASLRAHALFKK 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
DV YIV+N + +I++E TGR+ RRWSEG+HQA+EAKE + IQ+++ +A IT+Q+ F+
Sbjct: 318 DVHYIVQNNQVIIVDEFTGRIMPGRRWSEGLHQAIEAKEHVPIQSENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KLSGMTGTA TE E K++ + V+ +PT+ P IR DL F TA K++ +++
Sbjct: 378 LYHKLSGMTGTADTEAFELNKIYGLEVVVIPTHRPMIRKDLGDVVFLTAEEKYQAVAEDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ +PVLVG+TS+ENSE LS LLK+QGIPH VLNA K REA V QAG+ A+
Sbjct: 438 KRCVERQQPVLVGTTSIENSERLSALLKKQGIPHEVLNA--KQHEREAHIVEQAGKPGAV 495
Query: 384 TISTNMAGRGTDIILGGN 401
TI+TNMAGRGTDI+LGG+
Sbjct: 496 TIATNMAGRGTDIVLGGS 513
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 8/167 (4%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLHVIG+ HESRRIDNQLRGR+GRQGDPGS+RF ++L+D++ + F+ D A L+++
Sbjct: 548 GGLHVIGSERHESRRIDNQLRGRSGRQGDPGSSRFYLALEDDLMRIFASDRVAA--LMAK 605
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ IE + R + Q E F IRK ++ +D+V QRK VY R ++
Sbjct: 606 LGMGHGEAIEHPWVTRAIENAQRKVEARNFDIRKEILAYDDVANDQRKVVYAQRNELM-- 663
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 697
A E S+ I + V++ +I + P W + + LL+EF
Sbjct: 664 AAEEISEIITAIRKDVINNVINQYIPPRSMEEQWDIEGLEEHLLQEF 710
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
LR+++ + + ++ + +E + M+ E++V+++ LD W++HL M+ L ++
Sbjct: 730 FLREHIVEAMEQAHKD--KEKKITPAVMRHFEKSVMLQVLDNSWKEHLAAMDYLRQGIHF 787
Query: 840 RSFGHRNPLEEYKIDGCRFFISML 863
R + ++P +EYK + F +L
Sbjct: 788 RGYAQKDPKQEYKREAFEMFTHLL 811
>gi|50954330|ref|YP_061618.1| preprotein translocase subunit SecA [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|81692697|sp|Q6AGI2.1|SECA_LEIXX RecName: Full=Protein translocase subunit SecA
gi|50950812|gb|AAT88513.1| preprotein translocase SecA subunit [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 935
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/431 (47%), Positives = 281/431 (65%), Gaps = 30/431 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQI+GGA LH G+IAEMKT V+TVNDYLA +
Sbjct: 80 MRHFDVQIMGGAALHLGNIAEMKTGEGKTLVATTAAYLNAITSRGVHVITVNDYLASYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV R LG++ G+I G PEERR Y DITY N+E GFDYLRDN+A + +V
Sbjct: 140 ELMGRVFRALGMTTGVILAGQTPEERREQYAADITYGTNNEFGFDYLRDNMAWQASDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R +FAIVDEVDS+LIDE R PL+ISG +S + R + A +A+ L + Y V+
Sbjct: 200 RG---HYFAIVDEVDSILIDEARTPLIISGPSSGEANRWFNEFANLAKRLEPQVDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L ++L++ N P F+ NA+KA ++RD Y+V NG+ L
Sbjct: 257 KKRTVGVLESGIEKVEDYLGIDNLYESANTPLISFLNNAIKANALFKRDKDYVVMNGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EGIHQA+EAKEG++++A++ +A +T Q+ F+LY KLSGMTGTA
Sbjct: 317 IVDEHTGRILVGRRYNEGIHQAIEAKEGVEVRAENQTLATVTLQNYFRLYKKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN P R+D + + K++ +++ G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVPIPTNKPMQRIDQDDLIYKNEKAKFDQVVEDIAKRHEKGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LL ++G+ H VLNA K AREA VAQAGR ++T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSRLLAKKGVRHEVLNA--KNHAREAAIVAQAGRLGSVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLA 406
I+LGGN + +A
Sbjct: 495 IMLGGNAEFIA 505
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 524 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSF 583
+ E EV + GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F
Sbjct: 538 VAGEAEEVIKAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTDDLMRL--F 595
Query: 584 DTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKH 643
+ A L+ R + +DM IE + R + Q E IRK+++++D+VL QR+
Sbjct: 596 NAGAAESLMGRTSVPDDMAIESKVVSRAIRSAQSQVEARNAEIRKNVLKYDDVLNRQREA 655
Query: 644 VYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
+Y R+ IL G + +++ ++ VVD+I+
Sbjct: 656 IYGDRRHILEG--DDLHERVQTFLTEVVDDIL 685
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 780 LLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNV 839
+ R+ L D IA Y + +E + M+E+ER V++ +D WRDHL M+ L + +
Sbjct: 734 MRREILSDARIA-YKS--REESLGETAMRELERRVVLSVIDRRWRDHLYEMDYLKDGIGL 790
Query: 840 RSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R+ R+PL EY+ +G F M+ A R T+
Sbjct: 791 RAMAQRDPLVEYQREGYAMFQQMMGAIREETI 822
>gi|387928641|ref|ZP_10131319.1| preprotein translocase subunit SecA [Bacillus methanolicus PB1]
gi|387588227|gb|EIJ80549.1| preprotein translocase subunit SecA [Bacillus methanolicus PB1]
Length = 835
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 275/420 (65%), Gaps = 29/420 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQ++GG LHDG+IAEMKT VVTVN+YLA RDA M
Sbjct: 82 YPVQLMGGIALHDGNIAEMKTGEGKTLTATMPVYLNALTGRGVHVVTVNEYLASRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++ FLGL+VGL GM EE+++ Y DITY N+E GFDYLRDN+ V R
Sbjct: 142 GKLYEFLGLTVGLNLNGMSKEEKKAAYAADITYGTNNEFGFDYLRDNMVLYKHDKVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P HFA++DEVDS+LIDE R PL+ISG A K Y A L + YT + K
Sbjct: 200 -PLHFAVIDEVDSILIDEARTPLIISGTAQKSARLYIQANAFVRTLKKDEDYTYDEKTKG 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTEEGI AE A ++L+D + + ALKA RDV Y+V++G+ +I+++
Sbjct: 259 VQLTEEGITKAERAFGIDNLFDISHVTLNHHINQALKANVSMHRDVDYVVQDGEIVIVDQ 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN+P IR D P +AT GK+ +++ + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMNVVAIPTNMPVIREDRPDLIYATMEGKFRAVVEDIAERHKKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
+E SE +S LL+++GI HNVLNA K REAE +AQAG++ A+TI+TNMAGRGTDI LG
Sbjct: 439 IETSELISKLLQKKGILHNVLNA--KNHEREAEIIAQAGQRSAVTIATNMAGRGTDIKLG 496
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GEGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNMK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MMERLGMDDSQPIQSKMVSKAVESAQKRVEGNNFDARKQLLQYDDVLRQQREIIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L +E+ + + +Q+V++ + + W+L ++
Sbjct: 614 RDEVLE--SENLREIVESMIQSVIERNVEAYAPSHEDEEQWNLQGII 658
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ ++++ +D W DH+ M+ L +++R++G +PL EY+ +G F +M+++
Sbjct: 708 MREFEKVIVLRAVDSKWMDHIDAMDHLRQGIHLRAYGQIDPLREYQNEGYAMFENMIAS 766
>gi|296268762|ref|YP_003651394.1| preprotein translocase subunit SecA [Thermobispora bispora DSM
43833]
gi|296091549|gb|ADG87501.1| preprotein translocase, SecA subunit [Thermobispora bispora DSM
43833]
Length = 933
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 293/448 (65%), Gaps = 39/448 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH G+I+EM T VVTVNDYLAQRDAE
Sbjct: 81 RHFDVQIMGGANLHMGNISEMLTGEGKTLTCTLPAYLNALTGRGVHVVTVNDYLAQRDAE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLGL VG+I M P++RR Y+ DITY N+E GFDYLRDN+A + ++ V R
Sbjct: 141 MMGRVYRFLGLEVGVILANMPPDQRRKAYQADITYGTNNEFGFDYLRDNMAWSLDECVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------- 151
+FAIVDEVDS+LIDE R PL+ISG + Y AK+ L +G
Sbjct: 201 G---HYFAIVDEVDSILIDEARTPLIISGPGEQSAKWYREFAKIVPRLRRGTEGKDGEEP 257
Query: 152 ---YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQY 207
Y V+ K +V + E G+ E L ++L+ E+ +++ NALKAKE ++RD Y
Sbjct: 258 TGDYVVDEKKRTVGILESGVEKVEDWLGIDNLYKPEHTHLVQYLNNALKAKELFKRDRDY 317
Query: 208 IVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK 267
IV +G+ LI++E TGR+ RR++EGIHQA+EAKEG+ I+ ++ +A IT Q+ F+LY K
Sbjct: 318 IVVDGEVLIVDEFTGRILHGRRYNEGIHQAIEAKEGVPIKDENQTLATITLQNYFRLYEK 377
Query: 268 LSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMF 327
L+GMTGTA TE EF + +++ V+ +PTN P IR D+P + T K+E ++++ +
Sbjct: 378 LAGMTGTAATEANEFWQTYRLHVVPIPTNRPMIRKDMPDVVYKTEDAKFEACVEDIKKRY 437
Query: 328 RLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITIST 387
G+PVLVG+TSVE SE LS +LK+ GIPH VLNA K A+EA +A+AGRK+A+T++T
Sbjct: 438 EKGQPVLVGTTSVEKSEKLSRMLKRAGIPHQVLNA--KNHAKEAAIIAEAGRKHAVTVAT 495
Query: 388 NMAGRGTDIILGGNPKMLAKKIIEDRLL 415
NMAGRGTDI+LGGNP+ A + + +R L
Sbjct: 496 NMAGRGTDIMLGGNPEFRAHRELLERGL 523
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 110/171 (64%), Gaps = 5/171 (2%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E EV +LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ ++F+
Sbjct: 550 EHDEVVKLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRRFNSAKV 609
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A+ ++R+ +++PIE + + + Q E+ F IRK+++++DEV+ QR +Y
Sbjct: 610 EAI--MNRLNIPDNVPIESSIVTKAIASAQHQVEQQNFEIRKNVLKYDEVMNRQRSVIYA 667
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
R+ +L GA+ +Q+ +++ V+D + G + + W L+KL K F
Sbjct: 668 ERRKVLEGAD--LREQVRRFIGDVIDAYVKGATEE-GYAIDWDLEKLWKAF 715
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R++ R+PL EY+ +G F +ML
Sbjct: 768 MRELERRVILSVLDRKWREHLYEMDYLQEGIGMRAYAQRDPLVEYQREGYEMFNAMLEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|403738984|ref|ZP_10951585.1| protein translocase subunit SecA [Austwickia chelonae NBRC 105200]
gi|403191634|dbj|GAB78355.1| protein translocase subunit SecA [Austwickia chelonae NBRC 105200]
Length = 919
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 288/450 (64%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT V+TVNDYLAQ ++
Sbjct: 86 RHFDVQLVGGAALHFGNVAEMKTGEGKTLVATLPSYLNALEGRGVHVITVNDYLAQYQSD 145
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHR LGL G I M P ERR+ Y DITY N+E GFDYLRDN+A +E++V R
Sbjct: 146 LMGRVHRMLGLETGCILAKMTPAERRAEYAKDITYGTNNEFGFDYLRDNMAWATEEMVQR 205
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL--------VQGL 150
+FAIVDEVDS+LIDE R PL+ISG + + Y AK+ E L V+G+
Sbjct: 206 G---HNFAIVDEVDSILIDEARTPLIISGPSDQATKWYSEFAKIVEHLHRGRPGDRVRGI 262
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y ++ K V + E+GI E L ++L++ N P ++ NA+KAKE ++RD
Sbjct: 263 LPTGDYEIDEKKRVVGVLEQGIEKVEDLLGIDNLYESVNTPLVGYLNNAIKAKELFKRDK 322
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V G+ LI++E TGR+ RR++EG+HQA+EAKEG++IQ ++ +A IT Q+ F+LY
Sbjct: 323 DYVVIEGEVLIVDEHTGRILPGRRYNEGMHQAIEAKEGVEIQNENQTLATITLQNYFRLY 382
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA+TE E +++++ V+ +PTN P R D P + T + K++ Q++
Sbjct: 383 AKLSGMTGTAQTEAAELHQIYKLGVVPIPTNRPMARRDQPDLIYRTEKAKFDAVVQDIVV 442
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
+ G+PVLVG+TSVE SEYLS L + G+ H+VLNA K REA VA AGR+ A+T+
Sbjct: 443 KHKKGQPVLVGTTSVEKSEYLSQELSKNGVRHSVLNA--KQHEREAAIVADAGRRGAVTV 500
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI+LGGNP+ +A ++ R L
Sbjct: 501 ATNMAGRGTDIMLGGNPEFIAVSALKSRGL 530
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 4/160 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L E E +V LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD
Sbjct: 546 ALARAEEEVKAEHQDVMGLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQD 605
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
E+ + F+ + L++R ++ +PIE + R + Q E F IRK+++++D+
Sbjct: 606 ELMRM--FNGAVVERLMARTNLEDSVPIESKLVTRSIQSAQSQIEGRNFDIRKNVLKYDD 663
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
VL QRK +Y R+ +L G E Q+ ++ +D +
Sbjct: 664 VLNTQRKVIYGERRRVLEG--EDMHDQMVHFITDTIDSYV 701
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 771 NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINM 830
GR T +LR+ L + ++ QE + MK+VER V++ LD WR+HL M
Sbjct: 740 GGRAGITAEILREELASDALHAFDRRTQE--LTEPVMKQVERRVVLAVLDRKWREHLYEM 797
Query: 831 NRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ L + +R+ R+P+ EY +G + F +ML + +V
Sbjct: 798 DYLQEGIGLRAMAQRDPVVEYSREGYQMFNAMLDGIKEESV 838
>gi|399924663|ref|ZP_10782021.1| protein translocase subunit secA [Peptoniphilus rhinitidis 1-13]
Length = 912
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/452 (46%), Positives = 276/452 (61%), Gaps = 49/452 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF VQ+IGG VLH G IAEMKT +VTVNDYLA RD
Sbjct: 79 MKHFRVQVIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGTHIVTVNDYLASRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +V+ FLGLSVG I M E+R+ Y CDITY N+E GFDYLRDN+ E++V
Sbjct: 139 DWMGKVYEFLGLSVGCIIHDMDQEDRKIAYNCDITYGTNNEFGFDYLRDNMVIYKEEMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R HF IVDEVDS+LIDE R PL+ISG+ + V Y A L +
Sbjct: 199 RG---LHFCIVDEVDSILIDEARTPLIISGQGDESVDLYVRARDFVNTLSHRIKSQDEID 255
Query: 152 --------------YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALK 196
Y + K+ + LT++GI AE +L D N + + ALK
Sbjct: 256 LERFNREFEEETVDYVINEKDKTATLTDKGIEKAEKYFGIENLSDASNMELSHHINQALK 315
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A + D+ Y+V++G+ +I++E TGR+ RR+SEG+HQA+EAKEGL+++A+S +A I
Sbjct: 316 AAGTMKNDIDYVVKDGEIIIVDEFTGRLMYGRRYSEGLHQAIEAKEGLEVRAESKTLATI 375
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T+Q+ F++Y KLSGMTGTA TEE EF ++ + V+E+PTN P IR D Q + K+
Sbjct: 376 TFQNYFRMYKKLSGMTGTAMTEEGEFRDIYNIDVVEIPTNKPVIRDDDNDQIYINEDAKF 435
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+ +E+E G+PVLVG+ S++ SE LS LK+ GI HNVLNA K +E+E VAQ
Sbjct: 436 KAVTREIEEAHAKGQPVLVGTISIDKSEALSKYLKRAGIKHNVLNA--KKHEQESEIVAQ 493
Query: 377 AGRKYAITISTNMAGRGTDIILGGNPKMLAKK 408
AGR +TI+TNMAGRGTDI+LGGNP+ LAKK
Sbjct: 494 AGRFGQVTIATNMAGRGTDIVLGGNPEYLAKK 525
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 69/363 (19%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +++K + E EVK+ GGL +IGT HESRRIDNQLRGR+GRQGDPG +RF +S
Sbjct: 558 YQNLVKKFKEETDKEAEEVKKAGGLRIIGTERHESRRIDNQLRGRSGRQGDPGFSRFYIS 617
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
D++ + F+ D L ++ +ED PIE + R + Q E F IRK++++
Sbjct: 618 ADDDLIRLFAGDRFKETML--KLDPEEDEPIEHKILTRLIESAQRKVEGNNFSIRKNVLK 675
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 692
+D+V+ QR+ +Y R+ +L G E+ I + V+D I Y LD
Sbjct: 676 YDDVMNKQREVIYAERRKVLEG--ENLKDDIMEMRNDVIDNTI---------DFYNKLDD 724
Query: 693 LLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
K ++ I NF + +GI
Sbjct: 725 NNKNYLDFES-----------------------------IRNFGVSTFDFEEDFLKGIEN 755
Query: 753 KSS-SLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVE 811
++ SLK ++ +D+ K +E + + +E+E
Sbjct: 756 PTAESLKSFIKELADEKYKE--------------------------KEEDFGEEKFREIE 789
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R L++ +D W DH+ M++L + +R+ G +P+ Y +G F +M + + TV
Sbjct: 790 RVALLQNVDQKWMDHIDAMDQLRKGIGLRAVGQTDPVRAYAEEGFDMFQTMNESIKEDTV 849
Query: 872 ESL 874
+ L
Sbjct: 850 KML 852
>gi|157693930|ref|YP_001488392.1| preprotein translocase subunit SecA [Bacillus pumilus SAFR-032]
gi|166918853|sp|A8FHW5.1|SECA_BACP2 RecName: Full=Protein translocase subunit SecA
gi|157682688|gb|ABV63832.1| translocase [Bacillus pumilus SAFR-032]
Length = 841
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/427 (46%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTMPVYLNALSGKGVHIVTVNEYLASRDAEEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSLDKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+A++DEVDS+LIDE R PL+ISG+A+K Y A L +T ++K S
Sbjct: 200 -PLHYAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKIEDDFTYDIKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTE G+ AE A +L+D ++ + ALKA ++DV Y+V G+ +I++
Sbjct: 259 VQLTESGMTKAEKAFGIENLFDVKHVALNHHIAQALKAHVAMQKDVDYVVEEGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL++Q +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEVQNESMTLATITFQNYFRMYEKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNQPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDTTPIQSKMVSKAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKLLK 695
R ++ N + +Q+ ++ + G+ P + P W LD L++
Sbjct: 614 RFEVIDSDN--LKSIVINMIQSSIERAV-GSYTPKEELPEEWKLDGLVE 659
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E Y D M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEETYGDEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F M+++
Sbjct: 759 MFEHMVAS 766
>gi|253680968|ref|ZP_04861771.1| preprotein translocase, SecA subunit [Clostridium botulinum D str.
1873]
gi|253562817|gb|EES92263.1| preprotein translocase, SecA subunit [Clostridium botulinum D str.
1873]
Length = 834
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 273/423 (64%), Gaps = 30/423 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF Q+IGG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 79 MKHFREQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALSGKGVHVITVNDYLAKRDR 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLGL+ G+I + E+RR Y CDITY N+E GFDYLRDN+ E+ V
Sbjct: 139 DQMAQLYEFLGLTTGVIIHDLDNEQRREAYNCDITYGTNNEFGFDYLRDNMVVYKEERVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +F IVDEVDS+LIDE R PL+ISGE Y VA A+ L + YTV+ K
Sbjct: 199 R---NLNFCIVDEVDSILIDEARTPLIISGEGDNSTDFYKVADFFAKTLKED-DYTVDEK 254
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE+GI AE ++ D +N V+ ALKA +RD Y+V+N + +I
Sbjct: 255 TKSVILTEKGIEKAEKFFHLDNYGDADNMQVQHHVVQALKANYNMKRDKDYMVKNNEVII 314
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKE +KIQ +S +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 315 VDEFTGRLMEGRRYSDGLHQAIEAKEDVKIQKESKTLATITFQNYFRMYNKLSGMTGTAD 374
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + VI +PT+ P R+D P + + RGK++ E+ ++ G+PVLVG
Sbjct: 375 TEEAEFREIYGLDVIIIPTHRPIARIDAPDLVYKSERGKFKAIVNEIAETYKTGQPVLVG 434
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LSD+LK++GIPH VLNA KY +EAE ++ AG K ITI+TNMAGRGTDI
Sbjct: 435 TVSIEKSELLSDMLKRKGIPHQVLNA--KYHEKEAEIISHAGEKGMITIATNMAGRGTDI 492
Query: 397 ILG 399
LG
Sbjct: 493 KLG 495
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 71/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ +GGL VIGT HESRRIDNQLRGR+GRQGDPG +RF VSL+D++ + F+ +
Sbjct: 495 GEGVEEVGGLKVIGTERHESRRIDNQLRGRSGRQGDPGYSRFYVSLEDDLMRIFASERLQ 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + R+ ++ IE + + Q E F +RKS++++D+V+ QR+ +Y
Sbjct: 555 GV--VERLGLTDEDAIESRLVTNAIENAQKKVEGNNFDVRKSVLQYDDVMNQQREVIYKQ 612
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G ES + I + +++V+ + + ++ L L+KLL
Sbjct: 613 RSQVLEG--ESLKEDIQEMIKSVISQAVDAHMSGLDETLEEDLEKLL------------- 657
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
L+ I Y P K S L I SDD
Sbjct: 658 --------AYLQEI--------------YLP--------------KDSVTVDELKIKSDD 681
Query: 768 LTKNGRYRATTNLLRKYLGDIL--IASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
K DIL IA L +E M+E+ER +L+K +D W D
Sbjct: 682 EIK----------------DILIDIAQKLYSEKEEEITSERMREIERVILLKIVDTKWMD 725
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
H+ NM+ L + +R++ ++P++ Y+ +G F M+++ + TV+ L
Sbjct: 726 HIDNMDHLRQGMGLRAYRQQDPVQAYQFEGSEMFDEMINSIKIDTVKYL 774
>gi|352104461|ref|ZP_08960427.1| preprotein translocase subunit SecA [Halomonas sp. HAL1]
gi|350598927|gb|EHA15029.1| preprotein translocase subunit SecA [Halomonas sp. HAL1]
Length = 910
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/443 (47%), Positives = 280/443 (63%), Gaps = 47/443 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMVGGMTLHRGRIAEMKTGEGKTLVATLAVYLNALTEKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLS+G+I G EE+R Y+CDITY N+E GFDYLRDN+A + E V
Sbjct: 141 EWMRPLYEFLGLSIGVIFSGQSGEEKRHAYQCDITYGTNNEFGFDYLRDNMAFSLEDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R HFAIVDEVDS+LIDE R PL+ISG ++ Y V ++A+ L +G
Sbjct: 201 RG---LHFAIVDEVDSILIDEARTPLIISGAVDENTDLYKVVNQLAQQLEKGEESEDDDA 257
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWA-------RFVMNALKAK 198
+ V+ K VELTE+G E + L DE +A + + +AL+A+
Sbjct: 258 PVVGDFLVDEKQKQVELTEQGHNKVEELMRGEGLLGDEESLYAAQNLNLLQHMHSALRAR 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y RDV YIV G+ +I++E TGR RRWSEG+HQAVEAKEG+ +Q +S +A T+
Sbjct: 318 YLYNRDVDYIVSEGQVVIVDEHTGRSMPGRRWSEGLHQAVEAKEGVTVQRESQTLASTTF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F+LY KL+GMTGTA TE EF +++ + V+ +PTN P R DL + +A K+E
Sbjct: 378 QNYFRLYEKLAGMTGTADTEAFEFRQIYGLDVVVIPTNRPLARKDLNDLVYLSAEEKYEA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
++V++ GRPVLVG+ S+E SEYL++L+++ G+ NVLNA+ + EAE +AQAG
Sbjct: 438 IIKDVKTETEAGRPVLVGTASIETSEYLANLMREAGLAFNVLNAKQHQS--EAEIIAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGN 401
R AITI+TNMAGRGTDI+LGGN
Sbjct: 496 RPGAITIATNMAGRGTDIVLGGN 518
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLHV+G+ HESRRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+
Sbjct: 552 GGLHVVGSERHESRRIDNQLRGRAGRQGDPGSTRFFLSLEDSLMRLFGSDR--VKRLMQA 609
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + IE + + Q E F IRK L+E+D+V QR+ +YD R IL
Sbjct: 610 LGLEHGEAIEHKMVSNAVERAQKKVEGRNFDIRKQLLEYDDVANDQRRVIYDQRNEIL-- 667
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
A + + + + V++ I V P P W L L
Sbjct: 668 AADDVADAVIGIREEVMETAISSYVPPQSLPEQWDLPGL 706
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
++ E+ V+++ LD W++HL +M+ L +++R + +NP +EYK + F +L
Sbjct: 759 IRRFEKQVMLQVLDTRWKEHLQSMDHLRRGIHLRGYAQKNPKQEYKRESFELFQHLL 815
>gi|452752814|ref|ZP_21952554.1| Protein export cytoplasm protein SecA ATPase RNA helicase [alpha
proteobacterium JLT2015]
gi|451959886|gb|EMD82302.1| Protein export cytoplasm protein SecA ATPase RNA helicase [alpha
proteobacterium JLT2015]
Length = 899
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/431 (48%), Positives = 276/431 (64%), Gaps = 36/431 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG VLH G IAEM+T VVTVNDYLA RDA
Sbjct: 83 MRHFDVQLVGGIVLHRGEIAEMRTGEGKTLVATCAVYLNALEGKGVHVVTVNDYLASRDA 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGLSVG+I + +ERR+ Y DITY N+E GFDYLRDN+ + +V
Sbjct: 143 AWMGRLYTFLGLSVGVIIPDLPEDERRNAYAADITYGTNNEFGFDYLRDNMKYSRASMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R PF++A+VDEVDSVLIDE R PL+ISG Y K+ L + Y ++ K
Sbjct: 203 R---PFNYAVVDEVDSVLIDEARTPLIISGPTEDKSEMYVAVDKIVRQLGED-DYEIDEK 258
Query: 158 NNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
S++LTE+G E LE ++L+D EN AL+A + ++RD YIV+
Sbjct: 259 QKSIQLTEDGTERIERLLEDAGLLEGSNLYDIENTQIVHHTNQALRAIKMFKRDTDYIVK 318
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+GK +II+E TGR+ + RRWS+G+HQAVEAKE + I+ ++ +A IT+Q+ F++YPKLSG
Sbjct: 319 DGKIVIIDEFTGRMMDGRRWSDGLHQAVEAKEDVDIKPENQTLATITFQNYFRMYPKLSG 378
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF ++++ V+E+PTNLP R D Q F A K++ + G
Sbjct: 379 MTGTAATEAPEFYDIYKLNVVEIPTNLPVQREDYDDQFFKNAEDKYKAIVVAIREAAAKG 438
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+TS+E SE LS LK++G+ H+VLNAR + +EA VAQAGR A+TI+TNMA
Sbjct: 439 QPVLVGTTSIERSELLSAFLKKEGVDHSVLNAR--FHEQEAHIVAQAGRLGAVTIATNMA 496
Query: 391 GRGTDIILGGN 401
GRGTDI LGGN
Sbjct: 497 GRGTDIQLGGN 507
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
E E VK+ GGL V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ +
Sbjct: 533 EQEIKAEREAVKQAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFFLSLEDDLLRI 592
Query: 581 FSFDTSWAVDLISRITN---DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL 637
F +L++R+ N +E IE I + + Q E + +RK L+++D+V+
Sbjct: 593 FG-----QQNLLNRMMNSSLEEGEAIEHPWISKAIETAQKKVEARNYDVRKQLLQYDDVM 647
Query: 638 EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
QRK VY R+ ++ +E + + ++EII N P +P W+++ L +E
Sbjct: 648 NDQRKVVYQQREEVMD--SERVDDVVEEMRAETIEEIITLNAPPGSYPEQWNVEGLKEEV 705
Query: 698 IAIAG 702
+ G
Sbjct: 706 SRVLG 710
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 40/60 (66%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+E+E++ L++++D W++HL ++ L S++ +R++ + P+ EYK + F +ML+ R
Sbjct: 754 REIEKSFLLQSIDYRWKEHLATLDALRSSIGLRAYAQKQPINEYKKEAFALFEAMLTHIR 813
>gi|256826988|ref|YP_003150947.1| protein translocase subunit secA [Cryptobacterium curtum DSM 15641]
gi|256583131|gb|ACU94265.1| protein translocase subunit secA [Cryptobacterium curtum DSM 15641]
Length = 945
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/439 (46%), Positives = 278/439 (63%), Gaps = 33/439 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ+IGG L+ G IAEMKT +VTVNDYLA+RD+
Sbjct: 79 LRHFDVQLIGGMALNAGQIAEMKTGEGKTLVSTLAGYLNALGGNNVHIVTVNDYLARRDS 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM RV+RFLG+ VGLIQ GM P ++ Y+ DITY NSE GFDYLRDN+ +++ V
Sbjct: 139 EWMGRVYRFLGMKVGLIQNGMQPSQKIPAYQADITYGTNSEFGFDYLRDNMVTRADRRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R HFA+VDEVDS+LIDE R PL+ISG ++ Y A+V L + + + ++
Sbjct: 199 RG---HHFAVVDEVDSILIDEARTPLIISGAGTQAADTYRRFARVMPGLKRDIDFEMDEA 255
Query: 158 NNSVELTEEGIALAEMALETNDLWDENDPWARF---VMNALKAKEFYRRDVQYIVRNGKA 214
++ TE G+ E L DL+ NDP + + ALKA+ + RD Y+V +G+
Sbjct: 256 KRTITATETGLVKIENRLGIEDLY--NDPSGQMPNHLQQALKAQFLFHRDKDYVVADGEV 313
Query: 215 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 274
I++E TGR+ E RRWSEG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY KLSGMTGT
Sbjct: 314 KIVDEFTGRIMEGRRWSEGLHQAIEAKEGVAIKEENQTLATITLQNYFRLYEKLSGMTGT 373
Query: 275 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 334
A TE+ EF +++++PV+ +P N P R D + T K+ ++E G+P L
Sbjct: 374 AMTEDAEFREIYKLPVMAIPPNRPVARKDENDLIYRTIDAKFNAVADDIERRNEAGQPCL 433
Query: 335 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 394
+G+ S+ENSE LS LL ++GI H LNA K REA +AQAGR A+TI+TNMAGRGT
Sbjct: 434 IGTVSIENSEKLSRLLDKRGIAHETLNA--KNHEREAHIIAQAGRVGAVTIATNMAGRGT 491
Query: 395 DIILGGNPKMLAKKIIEDR 413
DI+LGGN +++A ++ R
Sbjct: 492 DILLGGNAEVMADDLLRAR 510
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
Query: 496 IDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLR 555
++ + P+ P+ A L + ++E V GGL VIGT HESRRIDNQLR
Sbjct: 524 VEAEEETEPVAPSEA-DRAQALAEARAITTDEHERVLAAGGLCVIGTERHESRRIDNQLR 582
Query: 556 GRAGRQGDPGSTRFMVSLQDEMFQKFSFD-TSWAVDLISRITNDEDMPIEGDAIVRQLLG 614
GRAGRQGDPGST+F +SL+D++ + F D ++ R EDMPI+ + + +
Sbjct: 583 GRAGRQGDPGSTQFYLSLEDDLMRLFGGDRMDRVASMMERTDMPEDMPIQAGMVSKAIES 642
Query: 615 LQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGAN 656
Q E FG RK+++E+D+V+ +QRK +Y+ R +IL G +
Sbjct: 643 AQRQVETINFGARKNVLEYDDVMNLQRKAIYEERNAILDGKD 684
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 804 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
D MK +E ++++ +D W DHL NM+ L + + +R+FG R+PL EYK + R F M
Sbjct: 767 DEIMKSLESQIMLRIIDTRWMDHLSNMDYLKTGIGLRAFGQRDPLVEYKNEAHRAFGEMT 826
Query: 864 SA 865
S
Sbjct: 827 SG 828
>gi|440698091|ref|ZP_20880462.1| preprotein translocase, SecA subunit [Streptomyces turgidiscabies
Car8]
gi|440279544|gb|ELP67415.1| preprotein translocase, SecA subunit [Streptomyces turgidiscabies
Car8]
Length = 940
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGDGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL+VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLTVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+LIDE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILIDEARTPLIISGPADQATKWYGDFAKLVTRLKRGETGNPLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE ++ D
Sbjct: 257 EETGDYDVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKNDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN +R D + T K+E ++
Sbjct: 377 SKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRDMVRKDQSDLIYRTEVAKFEAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 8/224 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEKAVKAEFEEVKDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVETQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +Q+ +M +D I W +D+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLHEQVQHFMDDTIDAYIAAET-AEGFAEEWDVDRL 712
Query: 694 LKEFIAIAG-KILDDLFAGISGDTLLKSIEELPELNSIDINNFY 736
F + K+ D +GD + E + E DI++ Y
Sbjct: 713 WGAFKQLYPVKVTVDELEEAAGDRAGLTAEFISESIKDDIHDQY 756
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|317125622|ref|YP_004099734.1| protein translocase subunit secA [Intrasporangium calvum DSM 43043]
gi|315589710|gb|ADU49007.1| protein translocase subunit secA [Intrasporangium calvum DSM 43043]
Length = 943
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 281/442 (63%), Gaps = 33/442 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G++AEMKT V+TVNDYLA+ +E
Sbjct: 81 RHFDVQLMGGAALHLGNVAEMKTGEGKTLVATLPSYLNALTGKGVHVITVNDYLAEYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+HR LG+ G I M PE+RR+ Y DITY N+E GFDYLRDN+A +LV R
Sbjct: 141 LMGRIHRALGIETGCILSSMTPEQRRAEYAKDITYGTNNEFGFDYLRDNMAWEPSELVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----YTV 154
HFAIVDEVDS+LIDE R PL+ISG A Y A++A L +G Y V
Sbjct: 201 G---HHFAIVDEVDSILIDEARTPLIISGPADIAAKWYVEFARIAARLNRGEDGRGDYEV 257
Query: 155 ELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGK 213
+ K +V + E GIA E L +L+D N P ++ NA+KAKE ++RD Y++ NG+
Sbjct: 258 DEKKRTVGVLEGGIARVEDLLGIENLYDTVNTPLIGYLNNAIKAKELFKRDKDYVIMNGE 317
Query: 214 ALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTG 273
LI++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F++Y KLSGMTG
Sbjct: 318 VLIVDEHTGRMLPGRRYNEGMHQAIEAKEGVEIKNENQTLATITLQNYFRMYDKLSGMTG 377
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE E ++Q+ VI +PTN+P IR D + T K+ ++ LG+PV
Sbjct: 378 TAQTEAAELNSIYQLGVIPIPTNMPMIRKDQADLVYRTEVAKFNAVVDDIVERHTLGQPV 437
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
LVG+TSVE SEYLS LK++GI H VLNA K REA VA AGRK A+T++TNMAGRG
Sbjct: 438 LVGTTSVEKSEYLSQQLKKRGIKHEVLNA--KQHEREAAIVADAGRKGAVTVATNMAGRG 495
Query: 394 TDIILGGNPKMLAKKIIEDRLL 415
TDI+LGGN + A ++ R L
Sbjct: 496 TDIMLGGNSEFRAVAELKQRGL 517
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 169/347 (48%), Gaps = 67/347 (19%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SLQD++ + F+ + V
Sbjct: 547 KVTGLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDDLMRLFN---AALV 603
Query: 590 D-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
D + ++D PIE + + Q + E + IRK+++++D+V+ QR+ +Y+ R
Sbjct: 604 DRFMVSAGMEDDQPIESKMVTNSIQKAQGAVEAQNYEIRKNVLKYDDVMNRQRQVIYEER 663
Query: 649 QSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDL 708
+++L G Q + + ++ V+++ +AG +
Sbjct: 664 RAVLNG------QDLHEQLRMFVNDV-------------------------VAGYVDAAT 692
Query: 709 FAGISGDTLLKSI-EELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
G +GD L + + L ++ + I DL
Sbjct: 693 AEGFAGDWDLDLLWDALRQVYPVSITISEIEDL--------------------------- 725
Query: 768 LTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHL 827
GR + LR+ L +Y + +ES D M+EVER V++ LD WR+HL
Sbjct: 726 --AGGRNAISAEFLREQLMSDAHHAY-DEREESLGSDT-MREVERRVVLSVLDRKWREHL 781
Query: 828 INMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
M+ L + +R+ R+PL EY+ +G + F +M+ A + +V ++
Sbjct: 782 YEMDYLQEGIGLRAMAQRDPLIEYQREGFQLFEAMMEAIKEESVSNI 828
>gi|390457186|ref|ZP_10242714.1| protein translocase subunit seca [Paenibacillus peoriae KCTC 3763]
Length = 816
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/422 (46%), Positives = 278/422 (65%), Gaps = 29/422 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG LH+G IAEMKT VVTVNDYLAQRD+
Sbjct: 81 RHYDVQMLGGIALHEGKIAEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSG 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M +V+ FLG++VGL M ++ Y CDITY N+E GFDYLRDN+ EQ+V R
Sbjct: 141 EMGQVYNFLGMTVGLNLANMDHAAKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
P +F I+DEVDS+L+DE R PL+ISG+A K Y A + + L YT+++K
Sbjct: 201 ---PLYFCIIDEVDSILVDEARTPLIISGQAQKSTELYFAADRFVKSLNVEEDYTLDIKV 257
Query: 159 NSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 217
SV LTE G++ AE +L+D E+ ++ ALKA R DV Y+V G+ LI+
Sbjct: 258 KSVALTENGVSKAENFFGLENLYDQESVTINHHIVQALKANAIMRLDVDYVVAEGEVLIV 317
Query: 218 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 277
+E TGR+ RR+S+G+HQA+EAKE + +Q +S+ +A IT+Q+ F++Y KL+GMTGTAKT
Sbjct: 318 DEFTGRLMAGRRYSDGLHQAIEAKENIIVQNESMTLATITFQNYFRMYRKLAGMTGTAKT 377
Query: 278 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 337
EE+EF K++ + V+++PTN PN RVD+P + + +GK+ E+ + +P+LVG+
Sbjct: 378 EEEEFKKIYGLEVLQIPTNRPNQRVDMPDVVYKSVKGKFHAVVDEILERNKKNQPILVGT 437
Query: 338 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 397
S+ENSE LS++LK++G+ H VLNA KY A EAE +++AG ++TI+TNMAGRGTDI+
Sbjct: 438 ISIENSELLSEMLKRKGVRHKVLNA--KYHAEEAEIISRAGEAGSVTIATNMAGRGTDIV 495
Query: 398 LG 399
LG
Sbjct: 496 LG 497
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 7/167 (4%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGST+F +SL DE+ ++F D
Sbjct: 497 GEGVSELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADN-- 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++++ R+ +ED PIE I R + Q E F RK ++++D+V+ QR +Y
Sbjct: 555 VLNMMERLGFEEDQPIESRMITRAIESAQKRVEGNNFDQRKVVLQYDDVMNQQRAIIYKQ 614
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNV-DPLKHPRYWSLDKL 693
R+ +L +E+ + +F ++ V++ ++ + D + P W L+ +
Sbjct: 615 RREVL--ESENIKEIVFDMIKPVIERVVEAHCGDDI--PENWELEAV 657
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
++E E+ ++++ +D W DH+ M++L +++R++G +PL EY+ +G F +M+ +
Sbjct: 708 VREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFHAMIGS 766
>gi|375091090|ref|ZP_09737391.1| preprotein translocase, SecA subunit [Helcococcus kunzii ATCC
51366]
gi|374564452|gb|EHR35745.1| preprotein translocase, SecA subunit [Helcococcus kunzii ATCC
51366]
Length = 912
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/460 (45%), Positives = 283/460 (61%), Gaps = 52/460 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+H+ VQ++GG +LH G I+EMKT +VTVNDYLA+RD
Sbjct: 81 MKHYPVQLVGGIILHQGRISEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAERDK 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+WM +V+RFLGL VG I G+ +ER+ Y DITY N++LGFDYLRDN+ E V
Sbjct: 141 DWMGKVYRFLGLEVGCILYGLTQKERQEAYNADITYATNNQLGFDYLRDNMEIYKEDTVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-------------- 143
R H+AIVDEVDS+LIDE R PL+ISG+ + Y A
Sbjct: 201 RG---LHYAIVDEVDSILIDEARTPLIISGKGEESTDMYFKADTFVKNLEGRILDPEETE 257
Query: 144 ----ELLV-----QGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMN 193
+LL+ + + + V+ K S LTE G A AE +L D EN +
Sbjct: 258 KNKLDLLLDEQKEETVDFVVDEKRKSATLTEVGTAKAEEYFGIENLSDAENMELVHHINQ 317
Query: 194 ALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
ALKA+ D+ Y+V G+ LI++E TGR+ + RR+S+G+HQA+EAKEG+ I+++ +
Sbjct: 318 ALKARNTMHIDIDYVVNEGEILIVDEFTGRIMQGRRYSDGLHQALEAKEGVAIKSEQKTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT+Q+ F++Y KLSGMTGTA TE+ EF +++ M VIE PTN P IR D + + +
Sbjct: 378 ATITFQNFFRMYDKLSGMTGTAMTEKDEFAEIYNMDVIEAPTNRPIIRKDENDRVYVNEK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K++ +E++ + G+PVLVG+ S+E SEYLS LLK+Q IPH VLNA K AREAE
Sbjct: 438 AKFDAVVEEIKEASQTGQPVLVGTVSIEKSEYLSKLLKKQRIPHEVLNA--KQHAREAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDR 413
VAQAG ITI+TNMAGRGTDI+LGGNP+ +AKK ++ R
Sbjct: 496 VAQAGEFGKITIATNMAGRGTDIVLGGNPEYMAKKEMKKR 535
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 9/142 (6%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL +IGT HESRRIDNQLRGR+GRQGDPG +RF VSL+D++ + F + + +
Sbjct: 585 GGLLIIGTERHESRRIDNQLRGRSGRQGDPGKSRFYVSLEDDLMRLFGGQS------LQK 638
Query: 595 ITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
T+ ED PIE + + Q E F RK ++E+D V+ QR+ +Y R ++L
Sbjct: 639 FTSFPEDEPIEAGILSSAIEKAQARVEGNNFATRKRVLEYDNVMNKQREVIYGERNAVLN 698
Query: 654 GANESCSQQIFQYMQAVVDEII 675
G + I M+ ++++ +
Sbjct: 699 G--DDMKSNILSMMETLLNDTV 718
>gi|256824725|ref|YP_003148685.1| protein translocase subunit secA [Kytococcus sedentarius DSM 20547]
gi|256688118|gb|ACV05920.1| protein translocase subunit secA [Kytococcus sedentarius DSM 20547]
Length = 901
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 288/450 (64%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQI+GGA LH GS+AEMKT VVTVNDYLA+ AE
Sbjct: 81 RHFDVQIMGGAALHHGSVAEMKTGEGKTLVATLPSYLNALTGKGVHVVTVNDYLAEYQAE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL G+I + P +RR YR DITY N+E GFDYLRDN+A ++ LV R
Sbjct: 141 LMGRVHRFLGLETGVILSKLSPAQRREEYRKDITYGTNNEFGFDYLRDNMAWSTSDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
H+AIVDEVDS+LIDE R PL+ISG + + Y A +A +L +G
Sbjct: 201 ---EHHYAIVDEVDSILIDEARTPLIISGPGDQATSWYTTFATLAGMLEKGTAADKLKGI 257
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 205
Y V++K +V + E GI E L ++L++ N P ++ NA+KAKE + +D
Sbjct: 258 EATGDYEVDIKKRTVGVLESGIEKVEDYLGVHNLYEARNTPLIGYLNNAIKAKELFTKDK 317
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ I++E TGR+ + RR+++GIHQA+EAKE ++I+ ++ +A +T Q+ F++Y
Sbjct: 318 DYVVMDGEVHIVDEHTGRLLKGRRYNDGIHQAIEAKEQVEIKQENQTLATVTLQNYFRMY 377
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KL+GMTGTA+TE E ++++ V+ +PTN P R D FA A+GK++ +++
Sbjct: 378 DKLAGMTGTAQTEAAELHSIYKLDVVPIPTNRPMQRQDQADLVFAKAKGKFDAVVEDIVE 437
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
R G+PVLVG+TSV SEYLS+ L +G+ H VLNA KY +EA VA+AGRK A+T+
Sbjct: 438 RHRRGQPVLVGTTSVSKSEYLSEQLTARGVQHEVLNA--KYHEQEAAIVAEAGRKGAVTV 495
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI+LGG+P+ +A ++ R L
Sbjct: 496 ATNMAGRGTDIMLGGSPEFMAVASLKKRGL 525
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 163/365 (44%), Gaps = 77/365 (21%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L E E EV LGGL+V+GT H+SRRIDNQLRGR+GRQGDPG +RF +SL+D
Sbjct: 541 ALARAEKAVQTEHQEVLELGGLYVLGTERHDSRRIDNQLRGRSGRQGDPGESRFYLSLED 600
Query: 576 EMFQKFSFDTSWAVDLISRITN--DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
++ +F+ L+ R D D P+E + + + Q E F RK+++++
Sbjct: 601 DLMVRFN------SGLMQRAMAGADPDTPLEFGMLTKAIERAQTQVESQNFESRKNVLKY 654
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSL 690
D+VL QR+ +Y R+ +L GA+ + F ++++I G V Y W
Sbjct: 655 DDVLNRQREVIYAERKRVLEGADLESQVRHF------INDVIIGYVQGATVHGYAEDWDF 708
Query: 691 DKLLKEFIAIAGKILDDLFAGISGDTLLKSIEEL-PELNSIDINNFYFPDLPKPPNLFRG 749
D+ L ++EEL P ++D D+ + G
Sbjct: 709 DE------------------------LWGALEELYPVSLTVD-------DIVEAAGGIGG 737
Query: 750 IRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKE 809
+ + D+LT + A + +E + M++
Sbjct: 738 VD---------AGLLIDELTSD-------------------AQHAYDAREQAMGETVMRQ 769
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+ER V++ LD WR+HL M+ L + +RS R+PL EY+ +G + F M + +
Sbjct: 770 LERRVVLGVLDRKWREHLYEMDYLKEGIGLRSMAQRDPLVEYQREGYQMFGVMADSIKEE 829
Query: 870 TVESL 874
V L
Sbjct: 830 AVMGL 834
>gi|256831078|ref|YP_003159806.1| preprotein translocase subunit SecA [Desulfomicrobium baculatum DSM
4028]
gi|256580254|gb|ACU91390.1| preprotein translocase, SecA subunit [Desulfomicrobium baculatum
DSM 4028]
Length = 838
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/423 (46%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG +LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLMGGMILHQGKIAEMKTGEGKTLVATLPVVLNALSGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM +++ F+GL+VG+I G+ ER+ Y D+TY N+E GFDYLRDN+ QLV
Sbjct: 141 AWMGQLYTFMGLTVGVIVHGLSDAERQEAYGADVTYGTNNEFGFDYLRDNMKFYKHQLVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAIVDEVDS+LIDE R PL+ISG K Y + L + H+T++ K
Sbjct: 201 R---PLNFAIVDEVDSILIDEARTPLIISGPGEKSTTLYARVNSIIPRLTRDDHFTIDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LT+EG+ E L +L+D N ++ AL+A + D YIV++G+ +I
Sbjct: 258 ARTVVLTDEGVVHCEEILGVTNLFDPANITLQHHILQALRAHYLFTLDDHYIVKDGQVVI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR+S+G+HQA+EAKEG+K++A++ +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 318 VDEFTGRLMPGRRFSDGLHQALEAKEGVKVEAENQTLASITFQNFFRMYKKLSGMTGTAD 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF +++ + V+ P N +R D P T K+ +E++ + G+PVLVG
Sbjct: 378 TEAVEFQQIYGLEVVVAPPNKQMVRKDFPDVILKTQAEKFGAIVEEIKGLHAKGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TS+E SEY+S LLK++G+PH VLNA KY +EAE VA AG+K +TI+TNMAGRGTDI
Sbjct: 438 TTSIEKSEYISTLLKKKGVPHEVLNA--KYHEKEAEIVAMAGQKGRVTIATNMAGRGTDI 495
Query: 397 ILG 399
+LG
Sbjct: 496 VLG 498
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 10/183 (5%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGLH++G+ HESRRIDNQLRGRAGRQGDPGS+RF ++L D + + F +
Sbjct: 498 GEGVRELGGLHILGSERHESRRIDNQLRGRAGRQGDPGSSRFYLALDDTLMRLFG--SER 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ ++ ++ IE I R + Q E + F IRK L+++D V+ QR+ +Y L
Sbjct: 556 IAGIMEKLGLEDGQTIENPLISRSIENAQKRVEGHNFEIRKQLIDYDNVMNQQREVIYSL 615
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R+ + + + + F VD+++ +PL + + + + L+E + LD+
Sbjct: 616 RREFMIAEDLQPTVEEF------VDDLLSQVYEPLDNRKGQA--ESLEEARGMIRSKLDE 667
Query: 708 LFA 710
+FA
Sbjct: 668 IFA 670
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 791 ASYLNVVQESR--YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPL 848
A+ L+V++E R D Y +E+ R L+ LD W+DHL+ M+ L + +R + R+P
Sbjct: 688 AAILSVLEEHRSLAPDQY-QEILRFFLLDALDRNWKDHLLQMDYLKEGIGLRGYAQRDPK 746
Query: 849 EEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQEL 887
+EYK +G F ++ R T+++L ++ +EL
Sbjct: 747 QEYKREGFELFEDLIFRIRENTMKALTHLRIEAVKQEEL 785
>gi|416348667|ref|ZP_11680425.1| preprotein translocase subunit SecA [Clostridium botulinum C str.
Stockholm]
gi|338196739|gb|EGO88920.1| preprotein translocase subunit SecA [Clostridium botulinum C str.
Stockholm]
Length = 784
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 273/423 (64%), Gaps = 30/423 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M+HF Q+IGG VLH G IAEMKT V+TVNDYLA+RD
Sbjct: 29 MKHFREQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALSGKGVHVITVNDYLAKRDR 88
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLGL+ G+I + E+RR Y CDITY N+E GFDYLRDN+ E+ V
Sbjct: 89 DQMAQLYEFLGLTTGVIIHDLDNEQRREAYNCDITYGTNNEFGFDYLRDNMVVYKEERVQ 148
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R +F IVDEVDS+LIDE R PL+ISGE Y VA A+ L + YTV+ K
Sbjct: 149 R---NLNFCIVDEVDSILIDEARTPLIISGEGDNSTDFYKVADFFAKTLKED-DYTVDEK 204
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV LTE+GI AE ++ D +N V+ ALKA +RD Y+V+N + +I
Sbjct: 205 TKSVILTEKGIEKAEKFFHLDNYGDADNMQVQHHVVQALKANYNMKRDKDYMVKNNEVII 264
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ E RR+S+G+HQA+EAKE +KIQ +S +A IT+Q+ F++Y KLSGMTGTA
Sbjct: 265 VDEFTGRLMEGRRYSDGLHQAIEAKEDVKIQKESKTLATITFQNYFRMYNKLSGMTGTAD 324
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE EF +++ + VI +PT+ P R+D P + + RGK++ E+ ++ G+PVLVG
Sbjct: 325 TEEAEFREIYGLDVIIIPTHRPIARIDAPDLVYKSERGKFKAIVNEIAETYKTGQPVLVG 384
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LSD+LK++GIPH VLNA KY +EAE ++ AG K ITI+TNMAGRGTDI
Sbjct: 385 TVSIEKSELLSDMLKRKGIPHQVLNA--KYHEKEAEIISHAGEKGMITIATNMAGRGTDI 442
Query: 397 ILG 399
LG
Sbjct: 443 KLG 445
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 71/349 (20%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ +GGL VIGT HESRRIDNQLRGR+GRQGDPG +RF VSL+D++ + F+ +
Sbjct: 445 GEGVEEVGGLKVIGTERHESRRIDNQLRGRSGRQGDPGYSRFYVSLEDDLMRIFASERLQ 504
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + R+ ++ IE + + Q E F +RKS++++D+V+ QR+ +Y
Sbjct: 505 GV--VERLGLTDEDAIESRLVTNAIENAQKKVEGNNFDVRKSVLQYDDVMNQQREVIYKQ 562
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDD 707
R +L G ES + I + +++V+ + + ++ L L+KLL
Sbjct: 563 RSQVLEG--ESLKEDIQEMIKSVISQAVDAHMSGLDETLEEDLEKLL------------- 607
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDD 767
L+ I Y P K S L I SDD
Sbjct: 608 --------AYLQEI--------------YLP--------------KDSVTVDELKIKSDD 631
Query: 768 LTKNGRYRATTNLLRKYLGDIL--IASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRD 825
K DIL IA L +E M+E+ER +L+K +D W D
Sbjct: 632 EIK----------------DILIDIAQKLYSEKEEEITSERMREIERVILLKIVDTKWMD 675
Query: 826 HLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESL 874
H+ NM+ L + +R++ ++P++ Y+ +G F M+++ + TV+ L
Sbjct: 676 HIDNMDHLRQGMGLRAYRQQDPVQAYQFEGSEMFDEMINSIKIDTVKYL 724
>gi|288572903|ref|ZP_06391260.1| preprotein translocase, SecA subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568644|gb|EFC90201.1| preprotein translocase, SecA subunit [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 918
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/486 (44%), Positives = 294/486 (60%), Gaps = 64/486 (13%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQ++GG LH+G+IAEMKT VVTVNDYLA+RDA
Sbjct: 87 LRHFDVQLMGGVALHEGNIAEMKTGEGKTLVAPLAVILNALTGRGVHVVTVNDYLAKRDA 146
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WME ++ LGLSVG+I M PEERR Y DITY NSE GFDYLRDN+ + Q+V
Sbjct: 147 SWMEPLYNALGLSVGVIYSFMDPEERRKAYEADITYGTNSEFGFDYLRDNMVLSQAQMVQ 206
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R +F IVDEVDS+LIDE R PL+ISG + Y A ++A L
Sbjct: 207 RG---HNFCIVDEVDSILIDEARTPLIISGPSEDSEEPYSRADQIASRLSGVAKDPNEVK 263
Query: 147 ---VQGLH-------YTVELKNNSVELTEEGIALAEMALETNDLWDE--NDPWARFVMNA 194
+ G + + K SV LT GIA E L T DL+ + + A ++ A
Sbjct: 264 PSMLDGQERPEPDGDFEYDEKERSVALTSRGIAKCEEMLGTPDLFTDMAHADMAHKILQA 323
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
+KA+ ++RD Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKEG+KI +S +A
Sbjct: 324 IKARTLFQRDTHYVVKDGEIVIVDEFTGRLMFGRRYSDGLHQAIEAKEGVKIGKESQTLA 383
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT Q+ F++Y KL+GMTGTA TE +EF +++ + V+ +PTN P +R D+ Q + T
Sbjct: 384 TITLQNYFRMYRKLAGMTGTAATEAEEFKEIYGLGVVVIPTNRPVVREDMADQVYRTKTE 443
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K+ E++ + GRP+LVG+TSVE SE L+ +LK + +PH VLNA KY RE+ V
Sbjct: 444 KFAAVADEIQVISSEGRPILVGTTSVEQSERLAKMLKARKVPHQVLNA--KYHERESLIV 501
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSP 434
AQAGR A+T++TNMAGRGTDI+LGGNP+ LA+ E L E D SSP
Sbjct: 502 AQAGRLGAVTVATNMAGRGTDILLGGNPEYLAQ-------------EELRKEGADPNSSP 548
Query: 435 KVLSEI 440
+ E+
Sbjct: 549 ERYGEL 554
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 105/175 (60%), Gaps = 10/175 (5%)
Query: 513 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 572
Y +L+ + CS E ++V LGGL ++GT HE+RRIDNQLRGRAGRQGDPGS+RF +S
Sbjct: 551 YGELLESYKKACSEEKAKVLDLGGLCILGTERHEARRIDNQLRGRAGRQGDPGSSRFFLS 610
Query: 573 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 632
L+D++ + F + + + ++ +E IE + R + Q E+ ++ IR+ L+
Sbjct: 611 LEDDLLRLFGSERIQGI--MGKLGLEEGEAIEHGLLTRAIESAQKKVEQLHYDIRRQLLM 668
Query: 633 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII------FGNVDP 681
+D V+ QR+ VYD RQ IL+ +E ++ + VV++++ G VDP
Sbjct: 669 YDNVMNRQREAVYDERQRILS--DEDVVLHGWEIVGGVVEDVLDRAFPENGEVDP 721
>gi|241763816|ref|ZP_04761862.1| preprotein translocase, SecA subunit [Acidovorax delafieldii 2AN]
gi|241366948|gb|EER61353.1| preprotein translocase, SecA subunit [Acidovorax delafieldii 2AN]
Length = 917
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/473 (46%), Positives = 289/473 (61%), Gaps = 51/473 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMALHYGKIAEMRTGEGKTLTATLPVYLNALSGKGVHVVTVNDYLANRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM R++ FLGL+VG+ M EE+++ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 MWMGRLYNFLGLTVGINLPNMPREEKQAAYAADITYGTNNEYGFDYLRDNMVYEARDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV---------- 147
+FAIVDEVDS+LIDE R PL+ISG+A A Y KV LLV
Sbjct: 201 HG---LNFAIVDEVDSILIDEARTPLIISGQAEDHTAMYIAMNKVVPLLVRQEGEADPRT 257
Query: 148 -QGL----HYTVELKNNSVELTEEGIALAEMALETNDLWDEN----DPWARFVMN----A 194
+G+ +T++ K + V LTE+G AE L + L E DP +M+ A
Sbjct: 258 GEGVTKPGDFTLDEKTHQVFLTEQGHESAERILASQGLIAEGASVYDPANITLMHHLYAA 317
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVA 254
L+A Y RD Y+V+NG+ +I++E TGR+ RRWSEG+HQAVEAKEG+ IQA++ +A
Sbjct: 318 LRANHLYHRDQHYVVQNGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVNIQAENQTLA 377
Query: 255 QITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARG 314
IT+Q+ F+LY KL+GMTGTA TE EF +++ + + +P N P+ R D + + T R
Sbjct: 378 SITFQNYFRLYSKLAGMTGTADTEAYEFQEIYGLETVVIPPNRPSRRDDQLDRVYKTTRE 437
Query: 315 KWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETV 374
K+E A +++ G+PVLVG+TS+ENSE + LL ++G+PH VLNA K AREA+ V
Sbjct: 438 KYEAAIKDIRECHERGQPVLVGTTSIENSEIIDQLLNKEGLPHQVLNA--KQHAREADIV 495
Query: 375 AQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEV 427
AQAGR ITI+TNMAGRGTDI+LGGN + L + D L T++A EV
Sbjct: 496 AQAGRAGMITIATNMAGRGTDIVLGGNIEKLLAAVETDESLDEATKQARIAEV 548
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+VK LGGL +I T HESRRIDNQLRGR+GRQGDPGS+RF +SL D + + F+ D A+
Sbjct: 558 KVKELGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLMRIFAGDRVKAI 617
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ + IE + R + Q E F IRK L+E+D+V QRK +Y R
Sbjct: 618 --MDRLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRN 675
Query: 650 SILTGA 655
IL A
Sbjct: 676 DILDAA 681
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 809 EVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+ ER VL+++ D WRDHL ++ L +++R + + P +EYK + F ++ +
Sbjct: 772 QFERVVLLQSFDSNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVK 830
>gi|407980385|ref|ZP_11161174.1| preprotein translocase subunit SecA [Bacillus sp. HYC-10]
gi|407412866|gb|EKF34621.1| preprotein translocase subunit SecA [Bacillus sp. HYC-10]
Length = 841
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/427 (46%), Positives = 278/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT +VTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTMPVYLNALTGKGVHIVTVNEYLASRDAQEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSLDKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+A++DEVDS+LIDE R PL+ISG+A+K Y A L +T ++K S
Sbjct: 200 -PLHYAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEDDFTYDIKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTE G+ AE A +L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTESGMTKAEKAFGIENLFDVKHVALNHHIAQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL++Q +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEVQNESMTLATITFQNYFRMYEKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P IR D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPVIRDDRPDLIYRTMDGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S +LK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKMLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSKAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKLLK 695
R ++ N + +Q+ ++ + G+ P + P W LD L++
Sbjct: 614 RFEVIDSDN--LKSIVINMIQSSIERAV-GSYTPKEELPEEWKLDGLVE 659
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + + M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEETFGEEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFT 758
Query: 858 FFISMLSA 865
F M+++
Sbjct: 759 MFEHMVAS 766
>gi|359397121|ref|ZP_09190171.1| Protein translocase subunit secA [Halomonas boliviensis LC1]
gi|357968915|gb|EHJ91364.1| Protein translocase subunit secA [Halomonas boliviensis LC1]
Length = 910
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 278/443 (62%), Gaps = 47/443 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMVGGMTLHRGRIAEMKTGEGKTLVATLAVYLNALPGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLS+G+I G EE+R Y CDITY N+E GFDYLRDN+A + E V
Sbjct: 141 EWMRPLYEFLGLSIGVIFSGQTGEEKRHAYHCDITYGTNNEFGFDYLRDNMAFSLEDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R H+AIVDEVDS+LIDE R PL+ISG ++ Y V ++A+ L +G
Sbjct: 201 RG---LHYAIVDEVDSILIDEARTPLIISGAVDENTDLYKVVNQLAQQLEKGEEVEDDDA 257
Query: 152 -----YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWA-------RFVMNALKAK 198
+ V+ K VELTE+G E + L DE +A + + +AL+A+
Sbjct: 258 TVVGDFLVDEKQKQVELTEQGHNKVEELMRAEGLLGDEESLYAAQNLNLLQHMHSALRAR 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y RDV YIV G+ +I++E TGR RRWSEG+HQAVEAKEG+ +Q +S +A T+
Sbjct: 318 HLYNRDVDYIVSEGQVVIVDEHTGRSMPGRRWSEGLHQAVEAKEGVTVQRESQTLASTTF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F+LY KL+GMTGTA TE EF +++ + V+ +PTN P R DL + +A K+E
Sbjct: 378 QNYFRLYEKLAGMTGTADTEAFEFRQIYGLDVVVIPTNRPLARKDLNDLVYLSAEEKYEA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
++V++ GRPVLVG+ S+E SEYL+ L+++ G+ NVLNA+ + EAE +AQAG
Sbjct: 438 IIKDVKTETEAGRPVLVGTASIETSEYLAKLMREAGLTFNVLNAKQHQS--EAEIIAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGN 401
R AITI+TNMAGRGTDI+LGGN
Sbjct: 496 RPGAITIATNMAGRGTDIVLGGN 518
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLHV+G+ HESRRIDNQLRGRAGRQGDPGSTRF +SL+D + + F D L+
Sbjct: 552 GGLHVVGSERHESRRIDNQLRGRAGRQGDPGSTRFFLSLEDSLMRLFGSDR--VKRLMQA 609
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + IE + + Q E F IRK L+E+D+V QR+ +YD R IL
Sbjct: 610 LGLEHGEAIEHKMVSNAVERAQKKVEGRNFDIRKQLLEYDDVANDQRRVIYDQRNEIL-- 667
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
A + + + + V++ I V P P W L L
Sbjct: 668 AADDVADAVIGIREEVMETAISDYVPPQSLPEQWDLPGL 706
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 863
++ E+ V+++ LD W++HL +M+ L +++R + +NP +EYK + F +L
Sbjct: 759 IRRFEKQVMLQVLDTRWKEHLQSMDHLRRGIHLRGYAQKNPKQEYKRESFELFQHLL 815
>gi|313901251|ref|ZP_07834738.1| preprotein translocase, SecA subunit [Clostridium sp. HGF2]
gi|312953859|gb|EFR35540.1| preprotein translocase, SecA subunit [Clostridium sp. HGF2]
Length = 782
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/431 (45%), Positives = 281/431 (65%), Gaps = 30/431 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+G +H G IAEMKT VVTVNDYLA RDAEWM
Sbjct: 82 YKVQIMGAVAMHQGDIAEMKTGEGKTLTSTMCVYLNALSGKGVHVVTVNDYLAGRDAEWM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++RFLGLSVG+ R + P ++R + CDITYT NSELGFDYLRDN+ + + V+R
Sbjct: 142 GQIYRFLGLSVGVNSRPLTPSQKRDAFNCDITYTTNSELGFDYLRDNMVTDVKDRVLRG- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
H AIVDEVDS+L+DE R PL+ISG A K Y A A+ L +G + ++ K
Sbjct: 201 --LHVAIVDEVDSILVDESRTPLIISGGAKKTANLYLQADAFAKRL-KGDDFEIDEKTRQ 257
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ L+E+G+++AE + +L+D ++ + ALKA + +V+Y+V++ + +I+++
Sbjct: 258 IMLSEKGVSVAERYFKIKNLYDVDHTQLVHHITQALKANYIMKNEVEYVVQDDEIVIVDQ 317
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR R +S+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F+LY KL+GMTGTAKTEE
Sbjct: 318 FTGRTMPGRAYSDGLHQAIEAKEGVSIKEETSTLATITYQNFFRLYDKLAGMTGTAKTEE 377
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EFL ++ M VIE+PTN P R+D P FA R K+ +EV+ ++ G+PVLVG+ S
Sbjct: 378 EEFLDIYNMRVIEIPTNRPVQRIDYPDAIFANPRLKFAALVKEVKELYEKGQPVLVGTIS 437
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE + +LL+++ IPH VLNA K AREAE +A+AGR ++TI+TNMAGRGTDI L
Sbjct: 438 VETSELVHELLRKERIPHEVLNA--KNHAREAEIIAKAGRPKSVTIATNMAGRGTDIKLT 495
Query: 400 GNPKMLAKKII 410
+ L ++
Sbjct: 496 DESRALGGLVV 506
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E + LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VSL+DE+ +F D +
Sbjct: 497 ESRALGGLVVLGSERHESRRIDNQLRGRSGRQGDPGYSRFYVSLKDELMIRFGGDKFEKL 556
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ D IE + + + Q E Y + +RK L+++D+VL QR+ +Y+ R
Sbjct: 557 -----FESMGDAQIESKMVTKSISQAQKRVEGYNYDVRKQLLDYDDVLRKQREIMYEQRN 611
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
+L NE + + V+D ++ NVD +H
Sbjct: 612 FVL--ENEDVHGIVRDMIDRVIDSVVDANVDHTRH 644
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
K+ E+ ++++ +D W +H+ M++L + +++RS+ NPL+ Y +G F M +
Sbjct: 704 FKQFEKTIVLRNMDRNWIEHIDMMDKLRNGIHLRSYAQNNPLQAYIQEGYEMFEEMQARI 763
Query: 867 RRLTV 871
R V
Sbjct: 764 AREVV 768
>gi|218295148|ref|ZP_03495984.1| preprotein translocase, SecA subunit [Thermus aquaticus Y51MC23]
gi|218244351|gb|EED10876.1| preprotein translocase, SecA subunit [Thermus aquaticus Y51MC23]
Length = 1333
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/388 (51%), Positives = 258/388 (66%), Gaps = 36/388 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGGAVLH+G IAEMKT VVTVNDYLA+RDA
Sbjct: 414 MRHFDVQLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVNDYLARRDA 473
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM V+R LGLSVG+IQ PEERR Y CD+TY NSELGFDYLRDN+A + +QLV+
Sbjct: 474 EWMGPVYRGLGLSVGVIQHSSTPEERRKAYLCDVTYVTNSELGFDYLRDNMAISPDQLVL 533
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R P H+AI+DEVDS+LIDE R PL+ISG A K Y A++A+ L +GL
Sbjct: 534 RHDTPLHYAIIDEVDSILIDEARTPLIISGPAEKATDMYYKMAEIAKKLERGLPPEPGVR 593
Query: 151 -----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRD 204
YTVE KN SV LT +GIA AE L L+ EN A ++ A++AKE Y RD
Sbjct: 594 KEPTGDYTVEEKNRSVHLTLQGIAKAEKLLGVEGLFSPENMELAHMLIQAIRAKELYHRD 653
Query: 205 VQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKL 264
YIV++G+ +I++E TGR+ RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+L
Sbjct: 654 RDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVKIERENQTLATITYQNFFRL 713
Query: 265 YPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVE 324
Y K +GMTGTAKTEEKEF +++ M V+ VPTN P IR D P + T +GK+ +E+
Sbjct: 714 YEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPMIRQDFPDVVYRTEKGKFYAVVEEIA 773
Query: 325 SMFRLGRPVLVGSTSVENSEYLSDLLKQ 352
+ G+PVLVG+ S+E SE LS +LK+
Sbjct: 774 EKYERGQPVLVGTISIEKSERLSQMLKE 801
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 181/406 (44%), Gaps = 80/406 (19%)
Query: 352 QQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIE 411
+QGIPH VLNA K+ A+EAE VAQA GR + + N M +
Sbjct: 877 RQGIPHQVLNA--KHHAKEAEIVAQA-------------GRSKTVTIATN--MAGRG--- 916
Query: 412 DRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLAK-----YVGKAEGK 466
++IKLG + L AALL K Y K E
Sbjct: 917 --------------------------TDIKLGGNPEYL--AAALLEKEGFDRYEWKVE-- 946
Query: 467 SWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSN 526
+ + E+ ++Q + ++E +LI++ ++ C
Sbjct: 947 LFIKKMVAGHEEEARALAQELGVRE--ELIER------------------IRQIREECKA 986
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
+ V+ LGGL ++GT HESRRIDNQLRGRAGRQGDPG +RF VS D++ + F+ D
Sbjct: 987 DEERVRSLGGLFILGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSFDDDLMRLFASDR- 1045
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
+ ++ R+ D+ PIE + R + Q E F IRK L++FD+V+ QR+ +Y
Sbjct: 1046 -VIAMLDRMGFDDSEPIEHPMVSRSIERAQKRVEDRNFAIRKQLLQFDDVMARQREVIYA 1104
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R+ IL G +E + ++ V + ++P HP W L+ L + + ++ D
Sbjct: 1105 QRRLILLGKDEEVKEAALGMVEETVASVAENFLNPQVHPEDWDLEGLKTALLDVVPQLAD 1164
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRR 752
F + G LK E + L + + + P L R + R
Sbjct: 1165 FPFEELRG---LKPDEGVERLVEAALKAYEAREAELSPPLMRAVER 1207
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 797 VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGC 856
+E+ M+ VER V++ +D W++HL N++ L + +R +G ++P +EYKI+
Sbjct: 1192 AREAELSPPLMRAVERFVILNVVDSAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEAT 1251
Query: 857 RFFISMLS 864
R F M+S
Sbjct: 1252 RLFNEMVS 1259
>gi|373124609|ref|ZP_09538450.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
21_3]
gi|422326385|ref|ZP_16407413.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
6_1_45]
gi|371659577|gb|EHO24842.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
21_3]
gi|371665964|gb|EHO31121.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
6_1_45]
Length = 782
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/431 (45%), Positives = 281/431 (65%), Gaps = 30/431 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+G +H G IAEMKT VVTVNDYLA RDAEWM
Sbjct: 82 YKVQIMGAVAMHQGDIAEMKTGEGKTLTSTMCVYLNALSGKGVHVVTVNDYLAGRDAEWM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++RFLGLSVG+ R + P ++R + CDITYT NSELGFDYLRDN+ + + V+R
Sbjct: 142 GQIYRFLGLSVGVNSRPLTPSQKRDAFNCDITYTTNSELGFDYLRDNMVTDVKDRVLRG- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
H AIVDEVDS+L+DE R PL+ISG A K Y A A+ L +G + ++ K
Sbjct: 201 --LHVAIVDEVDSILVDESRTPLIISGGAKKTANLYLQADAFAKRL-KGDDFEIDEKTRQ 257
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ L+E+G+++AE + +L+D ++ + ALKA + +V+Y+V++ + +I+++
Sbjct: 258 IMLSEKGVSVAERYFKIKNLYDVDHTQLVHHITQALKANYIMKNEVEYVVQDDEIVIVDQ 317
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR R +S+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F+LY KL+GMTGTAKTEE
Sbjct: 318 FTGRTMPGRAYSDGLHQAIEAKEGVSIKEETSTLATITYQNFFRLYDKLAGMTGTAKTEE 377
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EFL ++ M VIE+PTN P R+D P FA R K+ +EV+ ++ G+PVLVG+ S
Sbjct: 378 EEFLDIYNMRVIEIPTNRPVQRIDYPDAIFANPRLKFAALVKEVKELYEKGQPVLVGTIS 437
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE + +LL+++ IPH VLNA K AREAE +A+AGR ++TI+TNMAGRGTDI L
Sbjct: 438 VETSELVHELLRKERIPHEVLNA--KNHAREAEIIAKAGRPKSVTIATNMAGRGTDIKLT 495
Query: 400 GNPKMLAKKII 410
+ L ++
Sbjct: 496 DESRALGGLVV 506
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E + LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VSL+DE+ +F D +
Sbjct: 497 ESRALGGLVVLGSERHESRRIDNQLRGRSGRQGDPGYSRFYVSLKDELMIRFGGDKFEKL 556
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ D IE + + + Q E Y + +RK L+++D+VL QR+ +Y+ R
Sbjct: 557 -----FESMGDAQIESKMVTKSISQAQKRVEGYNYDVRKQLLDYDDVLRKQREIMYEQRN 611
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
+L NE + + V+D ++ NVD +H
Sbjct: 612 FVL--ENEDVHGIVRDMIDRVIDSVVDANVDHTRH 644
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
K+ E+ ++++ +D W +H+ M++L + +++RS+ NPL+ Y +G F M +
Sbjct: 704 FKQFEKTIVLRNMDRNWIEHIDMMDKLRNGIHLRSYAQNNPLQAYIQEGYEMFEEMQARI 763
Query: 867 RRLTV 871
R V
Sbjct: 764 AREVV 768
>gi|148272234|ref|YP_001221795.1| preprotein translocase subunit SecA [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|166918855|sp|A5CPU4.1|SECA_CLAM3 RecName: Full=Protein translocase subunit SecA
gi|147830164|emb|CAN01093.1| putative preprotein translocase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 941
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/455 (46%), Positives = 289/455 (63%), Gaps = 31/455 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RHFDVQI+GGA LH G+IAEMKT V+TVNDYLA +
Sbjct: 80 LRHFDVQIMGGAALHLGNIAEMKTGEGKTLVATLPAYLNAIASRGVHVITVNDYLASYQS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M RV R LG++ G+I G P++RR Y DITY N+E GFDYLRDN+A + +V
Sbjct: 140 ELMGRVFRALGMTTGVILAGQTPQQRREQYAADITYGTNNEFGFDYLRDNMAWQASDMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVEL 156
R FA+VDEVDS+LIDE R PL+ISG ++ D R + A VA+ LV + Y V+
Sbjct: 200 RG---HFFAVVDEVDSILIDEARTPLIISGPSAGDANRWFTEFATVAKRLVPEVDYEVDE 256
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L ++L++ N P F+ N++KAK +++D Y+V NG+ L
Sbjct: 257 KKRTVGVLEAGIEKVEDHLGIDNLYESANTPLISFLNNSIKAKALFKKDKDYVVMNGEVL 316
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTA 275
I++E TGR+ RR++EGIHQA+EAKEG+ ++A++ +A +T Q+ F+LY KLSGMTGTA
Sbjct: 317 IVDEHTGRILMGRRYNEGIHQAIEAKEGVAVKAENQTLATVTLQNYFRLYKKLSGMTGTA 376
Query: 276 KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLV 335
+TE EF+ +++ V+ +PTN P R D + + K+E +++ G+PVLV
Sbjct: 377 ETEAAEFMSTYKLGVVPIPTNRPMQRKDQSDLIYKNEKAKFEQVVEDIAERHAAGQPVLV 436
Query: 336 GSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTD 395
G+TSVE SEYLS LL ++G+ H VLNA K AREA VAQAGR ++T++TNMAGRGTD
Sbjct: 437 GTTSVEKSEYLSKLLAKKGVRHEVLNA--KNHAREAAIVAQAGRLGSVTVATNMAGRGTD 494
Query: 396 IILGGNPKMLAKKIIEDR-LLLLLTREALNVEVDD 429
I+LGGN + LA + R L + T E E DD
Sbjct: 495 IMLGGNAEFLAVAAMNARGLSPVETPEQYETEWDD 529
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 15/187 (8%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
V D + E ++V GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VFADVKAEVDEEAAKVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ A L+ R + +D+ IE + R + Q E IRK+++++D+
Sbjct: 590 DLMR--LFNNGAAASLMGRDSVPDDVAIESKVVSRAIRSAQGQVEARNAEIRKNVLKYDD 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII-----FGNVDPLKHPRYWSL 690
VL QR+ +Y R+ IL G + ++ ++++AV+D+++ GN D W
Sbjct: 648 VLNRQREAIYGDRRHILEG--DDLQERSQRFLEAVIDDVLDSHIGEGNGDD------WDF 699
Query: 691 DKLLKEF 697
D L E
Sbjct: 700 DALWTEL 706
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + M+E+ER V++ +D WR+HL M+ L + +R+ R+PL EY+ +G
Sbjct: 749 REEQLGGAAMRELERRVVLSVIDRRWREHLYEMDYLKDGIGLRAMAQRDPLVEYQREGFA 808
Query: 858 FFISMLSATRRLTV 871
F M+ A R TV
Sbjct: 809 LFQQMMGAIREETV 822
>gi|152977398|ref|YP_001376915.1| preprotein translocase subunit SecA [Bacillus cytotoxicus NVH
391-98]
gi|152026150|gb|ABS23920.1| preprotein translocase, SecA subunit [Bacillus cytotoxicus NVH
391-98]
Length = 836
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 276/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQ++GG LH+G+IAEMKT VVTVN+YLAQRDA
Sbjct: 79 MRPYPVQLMGGIALHEGNIAEMKTGEGKTLTSTLPVYLNALAGKGVHVVTVNEYLAQRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M ++H FLGL+VG+ M EE+++ Y DITY+ N+ELGFDYLRDN+ EQ V
Sbjct: 139 SEMGKLHEFLGLTVGINLNSMSREEKQAAYAADITYSTNNELGFDYLRDNMVLYKEQRVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAI+DEVDS+LIDE R PL+ISG+A K Y A L YT ++K
Sbjct: 199 R---PLHFAIIDEVDSILIDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYTFDVK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I
Sbjct: 256 TKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 316 VDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYKKLSGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P IR D F T GK+ Q++ + G+PVLVG
Sbjct: 376 TEEEEFRNIYNMNVIVIPTNRPVIRDDRADLIFKTMEGKFNAVVQDIVKRHKNGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE +S +L ++G+ HN+LNA K AREA+ +A+AG K A+TI+TNMAGRGTDI
Sbjct: 436 TVAIETSELISKMLTRKGVRHNILNA--KNHAREADIIAEAGVKGAVTIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK +GGL VIGT HESRRIDNQLRGRAGRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GEGVKEVGGLAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
++ R+ D+ PIE + R + Q E + RK L+++D+VL QR+ +Y
Sbjct: 556 T--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEII 675
RQ ++ +E+ I M++ VD I
Sbjct: 614 RQEVM--ESENLRSIIEGMMKSTVDRAI 639
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 40/59 (67%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ V+ + +D W DH+ M++L +++R++G +PL EY+++G F +M+++
Sbjct: 707 MREFEKVVVFRVVDTKWMDHIDAMDQLREGIHLRAYGQIDPLREYQMEGFAMFEAMIAS 765
>gi|396584183|ref|ZP_10484672.1| preprotein translocase, SecA subunit [Actinomyces sp. ICM47]
gi|395548216|gb|EJG15523.1| preprotein translocase, SecA subunit [Actinomyces sp. ICM47]
Length = 963
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/435 (48%), Positives = 280/435 (64%), Gaps = 32/435 (7%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQ++GG LH G IAEMKT VVTVNDYLA+ +
Sbjct: 93 MRPFHVQVMGGIALHQGKIAEMKTGEGKTLVATMPSYLRALTGKGVHVVTVNDYLAKYQS 152
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M RV+ FLGL+ G I G P ERR Y CDITY N+E GFDYLRDN+A E +V
Sbjct: 153 DIMSRVYNFLGLTSGCILVGQTPAERREMYDCDITYGTNNEFGFDYLRDNMAQVPEDMVQ 212
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVA-AKVAELLVQGLHYTVEL 156
R F IVDEVDS+LIDE R PL+ISG A D+ R+ + A++A LL + Y V+
Sbjct: 213 RG---HAFVIVDEVDSILIDEARTPLIISGPADGDLNRWYIEFARIARLLTRDEDYEVDE 269
Query: 157 KNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKAL 215
K +V + E GI E L +L++ N P F+ NA++AKE + RD YIV G+ L
Sbjct: 270 KKKTVGILEPGIDKVEDQLGVENLYEAANTPLIGFLNNAIRAKELFFRDRDYIVDAGEVL 329
Query: 216 IINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPK--LSGMTG 273
I++E TGRV RR+++G+HQA+EAKEG++I+A++ +A IT Q+ F+LYP+ SGMTG
Sbjct: 330 IVDEHTGRVLPGRRYNDGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYPEGSRSGMTG 389
Query: 274 TAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPV 333
TA+TE EF +++ V+ +PTN P IR D P + T +GK ++V G+PV
Sbjct: 390 TAETEAAEFASTYKIDVVPIPTNKPMIRKDQPDLVYPTEKGKLNAIIEDVVKRHEAGQPV 449
Query: 334 LVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRG 393
L+G+ SVE SE LS +LK++ IPH VLNA K AREAE VA AGRK A+T++TNMAGRG
Sbjct: 450 LIGTASVEKSELLSQMLKKKHIPHEVLNA--KQHAREAEVVAMAGRKGAVTVATNMAGRG 507
Query: 394 TDIILGGNPKMLAKK 408
TDI+LGGN +++A+K
Sbjct: 508 TDIMLGGNSEVIAQK 522
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 101/160 (63%), Gaps = 4/160 (2%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
LKD E E EV+ LGGL+V+G+ HESRRIDNQLRGR+GRQGDPG +RF +S++D
Sbjct: 545 ALKDAEEAVKAEREEVRELGGLYVLGSERHESRRIDNQLRGRSGRQGDPGESRFYLSMED 604
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F++ A +++ ED+P+E + R + Q E F IRK+++++D+
Sbjct: 605 DLMR--LFNSGMAQRIMASGAYPEDLPLENRIVSRSIQSAQHQVEARNFEIRKNVLKYDD 662
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEII 675
V+ QR+ +Y R+ +L G E Q+ +M+++V ++
Sbjct: 663 VMTGQRETIYGERRRVLEG--EDMGPQLRSFMESLVTGLV 700
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +ER V++ +D WR+HL M+ L + +R+ G R+PL EYK +G + F +M+
Sbjct: 783 MRTLERRVVISVVDRLWREHLYEMDYLKEGIGLRAMGQRDPLVEYKDEGAQMFQAMVERI 842
Query: 867 RRLTVESLVQY 877
R +V+ + Y
Sbjct: 843 REESVQQVFSY 853
>gi|269958446|ref|YP_003328233.1| preprotein translocase subunit SecA [Anaplasma centrale str.
Israel]
gi|269848275|gb|ACZ48919.1| preprotein translocase subunit SecA [Anaplasma centrale str.
Israel]
Length = 872
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/438 (47%), Positives = 279/438 (63%), Gaps = 37/438 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG LH G IAEMKT VVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGIALHRGMIAEMKTGEGKTLVATLAAYLGALEGAGVHVVTVNDYLAKRDS 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V++ LG+SVG I E+RR+ Y CD+ Y+ N+ELGFDYLRDN+ + E +V
Sbjct: 141 EWMGKVYQALGMSVGCITGASSDEQRRAAYACDVLYSTNNELGFDYLRDNMKFSRESMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R F++AIVDEVDS+LIDE R PL+ISG +D A Y + + L Y VE K
Sbjct: 201 R---GFNYAIVDEVDSILIDEARTPLIISGPVERDSALYGRIDSLVKALAPE-DYEVEEK 256
Query: 158 NNSVELTEEGIALAEMALET-------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
N S LTEEG E L + + L+D EN +V AL+A + + D YIV
Sbjct: 257 NRSAFLTEEGAVKVEKMLLSMGLIPAGSSLYDTENIVMMHYVSQALRAHKLFAVDKDYIV 316
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
+NG +II+E TGR+ E RR+S+G+HQA+EAKEGL + +++ +A T+Q+ F++Y ++S
Sbjct: 317 KNGNVVIIDEFTGRMMEGRRYSDGLHQALEAKEGLTVNSENQTLASTTFQNYFRMYRRIS 376
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE EFL + + V+++PTN+P RVD+ + T K+E + +
Sbjct: 377 GMTGTAATEADEFLGTYNLQVMQIPTNVPVRRVDMDDDVYCTEEEKFEAVMDFIVECNKR 436
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 389
+P LVG+ S+E SE LS +L ++GI H+VLNAR Y +EA +AQAGR A+TI+TNM
Sbjct: 437 LQPTLVGTISIEKSELLSGMLTKRGIKHSVLNAR--YHEKEAYIIAQAGRPGAVTIATNM 494
Query: 390 AGRGTDIILGGNPKMLAK 407
AGRGTDI LGGNP+MLAK
Sbjct: 495 AGRGTDIQLGGNPEMLAK 512
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL ++GT HESRRIDNQLRGR+GRQGDPG ++F +SL+D++ + F D ++ +
Sbjct: 546 GGLCIVGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDRVKG--MLKK 603
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSIL 652
+ + I+ I + + Q E + IRKSL+ FD+V+ QR+ V++ R +L
Sbjct: 604 LGMKKGEAIQHRWISKAIERAQKKVESRNYDIRKSLLRFDDVINEQRQVVFEQRNHVL 661
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 812 RAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
R VL+ +LD W +HL ++ L +N+RS G ++PL E+KI+ LS + V
Sbjct: 757 RRVLITSLDHLWIEHLSALDSLKCGINLRSIGQKDPLNEFKIEAFAMLKHTLSKFYEMVV 816
Query: 872 ESL 874
+ L
Sbjct: 817 QKL 819
>gi|347758215|ref|YP_004865777.1| preprotein translocase subunit SecA [Micavibrio aeruginosavorus
ARL-13]
gi|347590733|gb|AEP09775.1| preprotein translocase, SecA subunit [Micavibrio aeruginosavorus
ARL-13]
Length = 911
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/444 (46%), Positives = 282/444 (63%), Gaps = 37/444 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGAVLH G IAEM+T VVTVNDYLA+RDAE
Sbjct: 82 RHFDVQLMGGAVLHSGKIAEMRTGEGKTLVATLAAYLNALPGKGVHVVTVNDYLAKRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +V+RFLGL+VG I M +ER++ Y DITY N+E GFDYLRDN+ + +V R
Sbjct: 142 WMGQVYRFLGLTVGCIVHDMKDQERKAAYAADITYGTNNEFGFDYLRDNMKYRLDAMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PFHFAIVDEVDS+L+DE R PL+ISG A Y K+ L+ + ++ K
Sbjct: 202 ---PFHFAIVDEVDSILVDEARTPLIISGPAEDSSEMYTAINKIIPKLI-AEDFDLDEKQ 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE--------NDPWARFVMNALKAKEFYRRDVQYIVR 210
SV LT++G E L L + N V AL+A + + RD YIV+
Sbjct: 258 RSVALTDQGTEHVEDLLRQAGLLQDGGTMYDAGNVTLVHHVNQALRAHKLFARDRDYIVK 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+ K +II+E TGR+ E RR+SEG+HQA+EA+EG+KIQ ++ +A IT+Q+ F++YPKL+G
Sbjct: 318 DDKVIIIDEFTGRMMEGRRFSEGLHQALEAREGVKIQNENQTLASITFQNYFRMYPKLAG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE EF +++++ V+++PTN P R+D + + + R K + + V+
Sbjct: 378 MTGTAMTEAAEFEEIYKLGVVDIPTNNPVARIDHNDKIYKSLREKEDAVVKLVQECRDRN 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+ S+E SE LS+ LK+ GIPHNVLNAR + +EA ++QAGR A+TI+TNMA
Sbjct: 438 QPVLVGTVSIEKSEQLSEKLKKAGIPHNVLNAR--HHEQEAYIISQAGRPGAVTIATNMA 495
Query: 391 GRGTDIILGGNPKMLAKKIIEDRL 414
GRGTDI LGGN +M I+D L
Sbjct: 496 GRGTDIQLGGNLQMRIAAEIDDTL 519
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 84/127 (66%), Gaps = 10/127 (7%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V+ GGL+VIGT HESRRIDNQLRGR+GRQGDPG+T F +SL+D++ + F S ++
Sbjct: 542 VRSAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGATMFFLSLEDDLMRIFG---SEKME 598
Query: 591 LISRITNDEDMPIEGDAIV-----RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
++ + N + EG+A+V + L Q E+ F IRK+L++FD V+ QRK +Y
Sbjct: 599 ML--LGNKQIGLREGEALVHPWISKALERAQARVEQQNFEIRKNLLKFDNVMNDQRKVIY 656
Query: 646 DLRQSIL 652
+ R+ I+
Sbjct: 657 EQRREIM 663
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
+++E+A L++ LD W++HL+N++ L +N+R+FG R+PL EYK + F ML R
Sbjct: 755 RQMEKAFLLQLLDQNWKEHLLNLDHLRQGINLRAFGQRDPLNEYKTEAFTMFEMMLVQLR 814
Query: 868 R--LTVESLVQYWSSPMESQEL 887
T SL++ SP + Q+L
Sbjct: 815 ENVTTTLSLLEI-RSPEDLQQL 835
>gi|152967750|ref|YP_001363534.1| preprotein translocase subunit SecA [Kineococcus radiotolerans
SRS30216]
gi|254767919|sp|A6WEN1.1|SECA_KINRD RecName: Full=Protein translocase subunit SecA
gi|151362267|gb|ABS05270.1| preprotein translocase, SecA subunit [Kineococcus radiotolerans
SRS30216]
Length = 895
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/439 (46%), Positives = 281/439 (64%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GGA LH G+IAEM+T V+TVND+LA+ +E
Sbjct: 81 RHFDVQLMGGAALHQGNIAEMRTGEGKTLVATLPAYLNALSGKGVHVITVNDFLAEYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RV+RFLGL+ I M P+ERR Y DITY N+E GFDYLRDN+A ++ ++V R
Sbjct: 141 LMGRVYRFLGLTSACILSRMRPDERREAYAADITYGTNNEFGFDYLRDNMAWSTAEMVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
+FAIVDEVDS+LIDE R PL+ISG + Y AK+A L + Y V+ K
Sbjct: 201 G---HNFAIVDEVDSILIDEARTPLIISGPSDSPTKWYGEFAKIARRLTVDVDYEVDEKK 257
Query: 159 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVR-NGKALI 216
++ + E GI E L +L++ N P F+ NA+KAKE ++RD Y+V N + LI
Sbjct: 258 RTIGILEAGIEKVEDLLGIENLYESVNTPLIGFLNNAVKAKELFKRDKDYVVSPNDEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGR+ RR++EG+HQA+EAKEG+ IQ ++ +A IT Q+ F++Y KL+GMTGTA
Sbjct: 318 VDEHTGRILAGRRYNEGMHQAIEAKEGVPIQNENQTLATITLQNFFRMYDKLAGMTGTAM 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE EF + +++ V+ +PTN P +RVD P + + K+ +++ G+PVLVG
Sbjct: 378 TEAAEFHQTYKLGVVPIPTNRPAVRVDQPDLVYKNEQAKFAAVVEDIAEHHAAGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SEYLS LL + G+ H VLNA K REA VA AGRK A+T++TNMAGRGTDI
Sbjct: 438 TTSVEKSEYLSTLLTKAGVEHTVLNA--KQHEREASIVAMAGRKGAVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
ILGGN + LA + + D+ L
Sbjct: 496 ILGGNAEFLAVQAMRDKGL 514
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
VL+ + E EV+ LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 530 VLEQAQASVKAEHDEVRDLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTD 589
Query: 576 EMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 635
++ + F+ + ++R ED+PIE + R + Q E F IRK+++++D+
Sbjct: 590 DLMR--LFNAALVESFLTRTGIPEDVPIESKMVSRAIQSAQGQVEGRNFEIRKNVLKYDD 647
Query: 636 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRY---WSLDK 692
VL QR+ +Y R+ +L G E QI + +D+++ V + W LD+
Sbjct: 648 VLNRQREVIYAERRKVLEG--EDLHLQIRHF----IDDVVTAYVTEATARGFGEDWDLDE 701
Query: 693 LLK 695
L +
Sbjct: 702 LFE 704
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + ++++ER V++ LD WR+HL M+ L + +R+ R+PL EY+ +G +
Sbjct: 749 REQELGETVVRDLERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQRDPLVEYQREGYQ 808
Query: 858 FFISMLSATRRLTV 871
F +M A + +V
Sbjct: 809 LFGAMTEAIKEESV 822
>gi|194015728|ref|ZP_03054344.1| preprotein translocase, SecA subunit [Bacillus pumilus ATCC 7061]
gi|194013132|gb|EDW22698.1| preprotein translocase, SecA subunit [Bacillus pumilus ATCC 7061]
Length = 841
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/427 (46%), Positives = 277/427 (64%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT +VTVN+YLA RDAE M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTMPVYLNALSGKGVHIVTVNEYLASRDAEEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSLDKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+A++DEVDS+L+DE R PL+ISG+A+K Y A L +T ++K S
Sbjct: 200 -PLHYAVIDEVDSILVDEARTPLIISGQAAKSTKLYVQANAFVRTLKIEDDFTYDIKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTE G+ AE A +L+D ++ + ALKA ++DV Y+V G+ +I++
Sbjct: 259 VQLTESGMTKAEKAFGIENLFDVKHVALNHHIAQALKAHVAMQKDVDYVVEEGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL++Q +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEVQNESMTLATITFQNYFRMYEKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNQPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDTTPIQSKMVSKAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKLLK 695
R ++ N + +Q+ ++ + G+ P + P W LD L++
Sbjct: 614 RFEVIDSDN--LKSIVINMIQSSIERAV-GSYTPKEELPEEWKLDGLVE 659
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E Y D M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEETYGDEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F M+++
Sbjct: 759 MFEHMVAS 766
>gi|209543389|ref|YP_002275618.1| preprotein translocase subunit SecA [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531066|gb|ACI51003.1| preprotein translocase, SecA subunit [Gluconacetobacter
diazotrophicus PAl 5]
Length = 916
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 281/436 (64%), Gaps = 38/436 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHAGRIAEMRTGEGKTLVATLAVYLSALSGRGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGL+ G+I M +ERR+ Y+ DITY N+E GFDYLRDN+ E +V
Sbjct: 141 EEMGKLYAFLGLTTGVIVPNMPDDERRAAYQADITYGTNNEFGFDYLRDNMKYRIEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA--SKDVARYPVAAKVAELLVQGLHYTVE 155
R PFH AIVDEVDS+LIDE R PL+ISG A S D+ R V + EL+ + +
Sbjct: 201 R---PFHHAIVDEVDSILIDEARTPLIISGPAEDSSDLYR-SVDTVIHELVKTPEAFEKD 256
Query: 156 LKNNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYI 208
K SV LT+ G E L L+D N V +L+A + RDV YI
Sbjct: 257 EKFRSVILTDAGAEQVEAMLREAGVLIEGGLYDIHNIAVIHHVQQSLRAHTLFARDVDYI 316
Query: 209 VRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 268
VR GK +II+E TGR+ + RR+S+G+HQA+EAKE ++IQ ++ +A IT+Q+ F+LYPKL
Sbjct: 317 VRGGKVVIIDEFTGRMMDGRRYSDGLHQALEAKEHVEIQQENQTLASITFQNYFRLYPKL 376
Query: 269 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 328
SGMTGTA TE EF +++++ V+E+PTNLP R D + + TAR K+E +E + +
Sbjct: 377 SGMTGTAMTEADEFAEIYKLDVVEIPTNLPVARKDDDDEVYLTAREKYEAVSTLIEDIAK 436
Query: 329 LGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 388
+PVLVG+TS+E SEYLS+LL ++GI HNVLNAR + EA VAQAG AITI+TN
Sbjct: 437 TPQPVLVGTTSIEKSEYLSELLTKRGIRHNVLNAR--FHEMEATIVAQAGAPGAITIATN 494
Query: 389 MAGRGTDIILGGNPKM 404
MAGRGTDI LGGN +M
Sbjct: 495 MAGRGTDIKLGGNVEM 510
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V + GGL+VIGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F T
Sbjct: 543 VTKAGGLYVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFISLEDDLMRIFG--TERMGG 600
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ R+ E I I + L Q E F +RK+ +++D+V+ QRK VY R+
Sbjct: 601 MLQRLGLKEGEAIVHPWINKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVYAQRRE 660
Query: 651 ILTGANESCSQQ 662
+ + + + Q
Sbjct: 661 YMAADDLAATVQ 672
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +E+ VL+ T D W++HL+ ++++ + +R++G ++PL E+K + + F +ML A
Sbjct: 753 MRYIEKQVLLTTFDSVWKEHLLALDQMRQGIGLRAYGQKDPLNEFKHEAFQLFTAMLDAL 812
Query: 867 RRLTVESLVQYWSSP 881
R ++ + +P
Sbjct: 813 RLRVTSTMSRVEVAP 827
>gi|407772279|ref|ZP_11119581.1| preprotein translocase subunit SecA [Thalassospira profundimaris
WP0211]
gi|407284232|gb|EKF09748.1| preprotein translocase subunit SecA [Thalassospira profundimaris
WP0211]
Length = 902
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/434 (48%), Positives = 279/434 (64%), Gaps = 38/434 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VL G IAEMKT VVTVNDYLA RDAE
Sbjct: 82 RHYDVQLLGGMVLTSGKIAEMKTGEGKTLVSTLPVYLNALEGKGVHVVTVNDYLASRDAE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM V+ FLGL+VG+I GM ++RR+ Y CDITY N+ELGFDYLRDN+ E +V R
Sbjct: 142 WMGEVYGFLGLTVGVIMHGMTDDQRRAAYACDITYATNNELGFDYLRDNMKFRLEDMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLHYTVELK 157
PF+FAIVDEVDS+LIDE R PL+ISG A Y + A + +L+ + + + K
Sbjct: 202 ---PFNFAIVDEVDSILIDEARTPLIISGPAEDSSELYRSIDALIPKLIEE--DFEKDEK 256
Query: 158 NNSVELTEEGIALAEM------ALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
+V LTEEG AE L L+D N V AL+A + +++D YIV+
Sbjct: 257 ARAVTLTEEGTEHAEQLLMEMGILTEGTLYDVANVHLVHHVNQALRAHKLFQKDTDYIVK 316
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+ K +II+E TGR+ E RR+S+G+HQA+EAKE +KIQ ++ +A IT+Q+ F+LYP L+G
Sbjct: 317 DDKVVIIDEFTGRMMEGRRYSDGLHQALEAKEKVKIQNENQTLASITFQNYFRLYPTLAG 376
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE +EF +++ + V+E+PT+ P R D + + TA KW +++E + G
Sbjct: 377 MTGTAMTEAEEFEEIYNLQVVEIPTHRPIARKDADDEIYRTANEKWIAISEQLEDCHKRG 436
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+P LVG+ S+E SE LSDLLK++ IPH VLNA K REA VAQAG AITI+TNMA
Sbjct: 437 QPALVGTVSIEKSEILSDLLKKKKIPHEVLNA--KQHEREALIVAQAGAPGAITIATNMA 494
Query: 391 GRGTDIILGGNPKM 404
GRGTDI LGGN +M
Sbjct: 495 GRGTDIKLGGNVEM 508
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD-LIS 593
GGL VIGT HESRR+DNQLRGR+GRQGDPG ++F +SL+D++ + F S +D ++
Sbjct: 545 GGLFVIGTERHESRRVDNQLRGRSGRQGDPGGSKFYLSLEDDLMRIFG---SERMDGMLQ 601
Query: 594 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 653
++ E I I + L Q E F IRK++++FD+V+ QRK VY+ R+ ++
Sbjct: 602 KLGLQEGEAIYHPWINKALEKAQQKVEARNFDIRKNVLKFDDVMNDQRKVVYEQRRDLMQ 661
Query: 654 GANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 702
N ++ + V+++++ +P W L +E + G
Sbjct: 662 AKN--VAEDVADMRAEVIEDMVDKYCPAKVYPEQWEAASLHEEVTRLLG 708
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M++VE++++++ LD W++HL+ ++ L + +R++G R+PL E+K + F +ML +
Sbjct: 751 MRQVEKSLVLQLLDQSWKEHLLALDHLRQGIGLRAYGQRDPLNEFKREAFNMFEAMLVSL 810
Query: 867 RRLTVESL--VQYWSSP 881
R + L V+ S+P
Sbjct: 811 RERVTQMLSHVELQSTP 827
>gi|162146619|ref|YP_001601078.1| preprotein translocase subunit SecA [Gluconacetobacter
diazotrophicus PAl 5]
gi|189046168|sp|A9HAU9.1|SECA_GLUDA RecName: Full=Protein translocase subunit SecA
gi|161785194|emb|CAP54740.1| putative preprotein translocase secA subunit [Gluconacetobacter
diazotrophicus PAl 5]
Length = 916
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 281/436 (64%), Gaps = 38/436 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHAGRIAEMRTGEGKTLVATLAVYLSALSGRGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M +++ FLGL+ G+I M +ERR+ Y+ DITY N+E GFDYLRDN+ E +V
Sbjct: 141 EEMGKLYAFLGLTTGVIVPNMPDDERRAAYQADITYGTNNEFGFDYLRDNMKYRIEDMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEA--SKDVARYPVAAKVAELLVQGLHYTVE 155
R PFH AIVDEVDS+LIDE R PL+ISG A S D+ R V + EL+ + +
Sbjct: 201 R---PFHHAIVDEVDSILIDEARTPLIISGPAEDSSDLYR-SVDTVIHELVKTPEAFEKD 256
Query: 156 LKNNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYI 208
K SV LT+ G E L L+D N V +L+A + RDV YI
Sbjct: 257 EKFRSVILTDAGAEQVEAMLREAGVLIEGGLYDIHNIAVIHHVQQSLRAHTLFARDVDYI 316
Query: 209 VRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 268
VR GK +II+E TGR+ + RR+S+G+HQA+EAKE ++IQ ++ +A IT+Q+ F+LYPKL
Sbjct: 317 VRGGKVVIIDEFTGRMMDGRRYSDGLHQALEAKEHVEIQQENQTLASITFQNYFRLYPKL 376
Query: 269 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 328
SGMTGTA TE EF +++++ V+E+PTNLP R D + + TAR K+E +E + +
Sbjct: 377 SGMTGTAMTEADEFAEIYKLDVVEIPTNLPVARKDDDDEVYLTAREKYEAVSTLIEDIAK 436
Query: 329 LGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 388
+PVLVG+TS+E SEYLS+LL ++GI HNVLNAR + EA VAQAG AITI+TN
Sbjct: 437 TPQPVLVGTTSIEKSEYLSELLTKRGIRHNVLNAR--FHEMEATIVAQAGAPGAITIATN 494
Query: 389 MAGRGTDIILGGNPKM 404
MAGRGTDI LGGN +M
Sbjct: 495 MAGRGTDIKLGGNVEM 510
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
V + GGL+VIGT HESRRIDNQLRGRAGRQGDPGS+RF +SL+D++ + F T
Sbjct: 543 VTKAGGLYVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFISLEDDLMRIFG--TERMGG 600
Query: 591 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 650
++ R+ E I I + L Q E F +RK+ +++D+V+ QRK VY R+
Sbjct: 601 MLQRLGLKEGEAIVHPWINKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVYAQRRE 660
Query: 651 ILTGANESCSQQ 662
+ + + + Q
Sbjct: 661 YMAADDLAATVQ 672
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+ +E+ VL+ T D W++HL+ ++++ + +R++G ++PL E+K + + F +ML A
Sbjct: 753 MRYIEKQVLLTTFDSVWKEHLLALDQMRQGIGLRAYGQKDPLNEFKHEAFQLFTAMLDAL 812
Query: 867 RRLTVESLVQYWSSP 881
R ++ + +P
Sbjct: 813 RLRVTSTMSRVEVAP 827
>gi|421748311|ref|ZP_16185925.1| preprotein translocase subunit SecA [Cupriavidus necator HPC(L)]
gi|409772988|gb|EKN54875.1| preprotein translocase subunit SecA [Cupriavidus necator HPC(L)]
Length = 924
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/506 (44%), Positives = 301/506 (59%), Gaps = 63/506 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VL+D IAEM+T VVTVNDYLAQRDA
Sbjct: 81 MRHFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLAVYLNALTGKGVHVVTVNDYLAQRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGLSVG+ M +++++ Y DITY N+E GFDYLRDN+ + Q V
Sbjct: 141 EWMGRLYNFLGLSVGVNLSQMPHDQKQAAYNSDITYGTNNEFGFDYLRDNMVYDPGQRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R P H+AIVDEVDS+LIDE R PL+ISG+A Y + +LL + +
Sbjct: 201 R---PLHYAIVDEVDSILIDEARTPLIISGQAENHTDLYQRMNGIPKLLERQIGEEKADG 257
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----PWARFVMN----AL 195
Y V+ K + V LTE G AE + L E + P +M+ AL
Sbjct: 258 TGVEKPGDYYVDEKAHQVYLTEAGHEKAEQIMAQLGLIGEGESLYAPQNITLMHHLYAAL 317
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
+A + RD Y+V+N + +I++E TGR+ RRWS+G+HQAVEAKEG+ IQ ++ +A
Sbjct: 318 RAHSLFHRDQHYVVQNDEVVIVDEFTGRLMTGRRWSDGLHQAVEAKEGVTIQQENQTLAT 377
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KL+GMTGTA TE EF +++ + V+ +PTN P R D Q F T++ +
Sbjct: 378 ITFQNYFRMYEKLAGMTGTADTEAYEFQEIYGLEVVVIPTNKPTQRKDFQDQIFKTSKER 437
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
++ +++ + G+PVLVG+TS+E SEYLSDLL ++ +PH VLNA K AREAE VA
Sbjct: 438 YDAVVRDIRECYERGQPVLVGTTSIETSEYLSDLLNKEKLPHQVLNA--KQHAREAEIVA 495
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPK 435
QAGR ITI+TNMAGRGTDI+LGGN + A I D N+ DDK S
Sbjct: 496 QAGRPQMITIATNMAGRGTDIVLGGNVEKQAGFIEAD----------ANLSDDDKASR-- 543
Query: 436 VLSEIKLGSSSLALLAKAALLAKYVG 461
++++K SL KAA VG
Sbjct: 544 -IAQLKSEWQSLHEQVKAAGGLHIVG 568
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+VK GGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF +SL D++ + F+ D A+
Sbjct: 557 QVKAAGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDQLLRIFAGDRVRAI 616
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ E PIE + R + Q E F IRK L+++D+V QRK +Y LR
Sbjct: 617 --MDRLKMPEGEPIEAGIVTRSIESAQRKVEGRNFDIRKQLLQYDDVANDQRKEIYKLRN 674
Query: 650 SIL 652
+L
Sbjct: 675 EVL 677
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
ER+V+++++D WR+HL ++ L +++R + ++P +EYK + F +L +
Sbjct: 773 ERSVMLQSIDTHWREHLAALDHLRQGIHLRGYAQKDPKQEYKRESFELFARLLDVIK 829
>gi|239988142|ref|ZP_04708806.1| preprotein translocase subunit SecA [Streptomyces roseosporus NRRL
11379]
Length = 1144
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 285/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQMMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL+VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHKFLGLTVGCIVANMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 99/169 (58%), Gaps = 7/169 (4%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D++ + F + V
Sbjct: 554 EVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDDLMRLFK---AQMV 610
Query: 590 DLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLR 648
+ + + N +D+PIE + R + Q E+ F RK+++++DEVL QR+ +Y R
Sbjct: 611 ERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYDEVLNRQREVIYGER 670
Query: 649 QSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF 697
+ +L G E QI +M +D+ I W LD+L F
Sbjct: 671 RRVLEG--EDLQDQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRLWGAF 716
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|366166553|ref|ZP_09466308.1| preprotein translocase subunit SecA [Acetivibrio cellulolyticus
CD2]
Length = 915
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/447 (45%), Positives = 280/447 (62%), Gaps = 44/447 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHF VQ+IGG VLH G IAEM+T VVTVNDYLA+RD+
Sbjct: 82 MRHFKVQLIGGIVLHQGRIAEMRTGEGKTLVATLPVYLNALEGKGVHVVTVNDYLAKRDS 141
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +V+ FLGLSVGLI G+ ERR+ Y CDITY N+E GFDYLRDN+ + +V
Sbjct: 142 EWMGKVYNFLGLSVGLIVHGLDNNERRAAYNCDITYGTNNEFGFDYLRDNMVIYKQDMVQ 201
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK-VAELLVQGL------ 150
R H+AIVDEVDS+L+DE R PL+ISG K Y A V L V+
Sbjct: 202 R---DLHYAIVDEVDSILVDEARTPLIISGPGDKSTDLYKTADSFVRRLKVKVFTQLDDK 258
Query: 151 --------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFY 201
Y V+ K N+ LT +G+ AE +L D +N + + AL+A
Sbjct: 259 EDTDDIEADYIVDEKANTATLTADGVRKAEAFFGIENLSDSDNLTISHHINQALRAHGIM 318
Query: 202 RRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 261
+ D Y+V++G+ +I++E TGR+ RR+S+G+HQA+EAKEG+K++ +S +A IT+Q+
Sbjct: 319 KLDKDYVVKDGEIIIVDEFTGRLMYGRRYSDGLHQAIEAKEGVKVERESKTLATITFQNY 378
Query: 262 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 321
F++Y KLSGMTGTA TEE+EF ++++ V+ +PTN R+D P + GK+
Sbjct: 379 FRMYTKLSGMTGTALTEEQEFQDIYKLDVVVIPTNKSIARIDFPDSVYKNEMGKFNAVIN 438
Query: 322 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 381
++ + G+PVL+G+ S+E SE LS +LK++G+ H VLNA KY +EAE +AQAG+
Sbjct: 439 DIVECNKKGQPVLIGTISIEKSELLSSILKKRGVSHQVLNA--KYHEKEAEIIAQAGKFG 496
Query: 382 AITISTNMAGRGTDIILGGNPKMLAKK 408
A+TI+TNMAGRGTDI+LGGN + +AK+
Sbjct: 497 AVTIATNMAGRGTDIVLGGNAEFMAKQ 523
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLH+IGT HESRRIDNQLRGRAGRQGD GS+RF +SL+D++ + F D + ++
Sbjct: 578 GGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYISLEDDLMRLFGSDRLTGI--VNA 635
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ ++D IE + + Q E FGIRK+++++D+V+ QR+ +Y R+ +L G
Sbjct: 636 LGLEDDQAIEHRMLSSAIENAQKKVEGKNFGIRKNVLQYDDVMNKQREVIYSQRRKVLDG 695
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
ES + + + + D I+ HP W D +
Sbjct: 696 --ESLKESFLKMVDGIADSIVHLYCSESPHPDNWDWDSI 732
>gi|389574969|ref|ZP_10165020.1| preprotein translocase subunit SecA [Bacillus sp. M 2-6]
gi|388425393|gb|EIL83227.1| preprotein translocase subunit SecA [Bacillus sp. M 2-6]
Length = 841
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/427 (46%), Positives = 278/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
F VQ++GG LH+G+I+EMKT +VTVN+YLA RDA+ M
Sbjct: 82 FKVQLMGGIALHEGNISEMKTGEGKTLTSTMPVYLNALSGKGVHIVTVNEYLASRDAQEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ FLGL+VGL + +E+R Y DITY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GKIFEFLGLTVGLNLNSLDKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+A++DEVDS+LIDE R PL+ISG+A+K Y A L +T ++K S
Sbjct: 200 -PLHYAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKIEDDFTYDIKTKS 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V+LTE G+ AE A +L+D ++ + ALKA ++DV Y+V +G+ +I++
Sbjct: 259 VQLTESGMTKAEKAFGIENLFDVKHVALNHHIAQALKAHVAMQKDVDYVVEDGQVVIVDS 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+SEG+HQA+EAKEGL++Q +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRLMKGRRYSEGLHQAIEAKEGLEVQNESMTLATITFQNYFRMYEKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF ++ M V+ +PTN P +R D P + T GK++ ++V + G+PVLVG+ +
Sbjct: 379 EEFRNIYNMQVVTIPTNKPVVRDDRPDLIYRTMDGKFKAVAEDVAQRYMTGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE +S LLK +GIPH VLNA K REA+ + +AG+K A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELISKLLKNKGIPHQVLNA--KNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 EGVKELG 503
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F + +
Sbjct: 496 GEGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MLDRFGMDDSTPIQSKMVSKAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKLLK 695
R ++ N + +Q+ ++ + G+ P + P W LD L++
Sbjct: 614 RFEVIDSDN--LKSIVINMIQSSIERAV-GSYTPKEELPEEWKLDGLVE 659
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 43/68 (63%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E + D M+E E+ ++++ +D W DH+ M++L +++R++ NPL EY+++G
Sbjct: 699 KEETFGDEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758
Query: 858 FFISMLSA 865
F M+++
Sbjct: 759 MFEHMVAS 766
>gi|302534778|ref|ZP_07287120.1| preprotein translocase, SecA subunit [Streptomyces sp. C]
gi|302443673|gb|EFL15489.1| preprotein translocase, SecA subunit [Streptomyces sp. C]
Length = 930
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL+VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLTVGCILANMSPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYADFAKLVTRLTKGEAGNPLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE ++ D
Sbjct: 257 EETGDYEVDEKKRTVGIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKADK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN R D P + T K+ ++
Sbjct: 377 SKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRGMQRKDQPDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GIPH VLNA K REA VAQAGR+ A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIPHEVLNA--KQHEREATIVAQAGRRGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 516 VLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQD 575
L E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL D
Sbjct: 540 ALARAEAAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGD 599
Query: 576 EMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
++ + F + V+ + + N +D+PIE + R + Q E F RK+++++D
Sbjct: 600 DLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVETQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDKL 693
EVL QR+ +Y R+ +L G E +Q+ +M +D I V+ W LD+L
Sbjct: 657 EVLNSQREVIYGERRRVLEG--EDLHEQVRFFMDDTIDAYIAAETVEGFAEE--WDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WSAF 716
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|433447237|ref|ZP_20410870.1| preprotein translocase, SecA subunit [Anoxybacillus flavithermus
TNO-09.006]
gi|432000071|gb|ELK20977.1| preprotein translocase, SecA subunit [Anoxybacillus flavithermus
TNO-09.006]
Length = 834
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 276/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M + VQ++GG LH+G+IAEMKT VVTVN+YLA RDA
Sbjct: 79 MYPYKVQLMGGIALHEGNIAEMKTGEGKTLTATMPVYLNALTGKGVHVVTVNEYLASRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M R+++FLGLSVGL M EE+++ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 139 NEMGRLYQFLGLSVGLNLNSMSREEKQAAYNADITYGTNNEFGFDYLRDNMVLYKEHMVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AI+DEVDS+LIDE R PL+ISG A K Y A L + + YT + K
Sbjct: 199 R---PLHYAIIDEVDSILIDEARTPLIISGTAQKSTKLYIQANAFVRTLKRDVDYTYDEK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV+LTEEG+ AE A ++L+D ++ + AL+A +RDV Y+V +GK +I
Sbjct: 256 TKSVQLTEEGMNKAERAFGIDNLFDLKHVTLNHHISQALRAHVVMQRDVDYVVEDGKIVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 316 VDPFTGRLMRGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P IR D P + T GK+ +++ G+PVLVG
Sbjct: 376 TEEEEFRNIYNMQVIVIPTNKPVIRDDRPDLIYRTMEGKFRAVVEDIAERHAKGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +L ++GI HNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI
Sbjct: 436 TVSIETSELLSGMLTKRGIRHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDI 493
Query: 397 ILG 399
LG
Sbjct: 494 KLG 496
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F +
Sbjct: 496 GEGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSENMM 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 556 A--MMDRLGMDDSQPIQSKIVSKAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 613
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L +E+ + + +Q+V++ ++ + + P W++ ++
Sbjct: 614 RFQVLD--SENLRDIVEKMIQSVIERVVRTHTPDEEMPEEWNVQAIV 658
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+ESR M+E ER ++++ +D W +H+ M +L +++R++G +PL EY+++G
Sbjct: 699 KESRIPSEQMREFERVIVLRAVDMKWMEHIDAMEQLRQGIHLRAYGQIDPLREYQMEGYA 758
Query: 858 FFISMLSA 865
F +M+++
Sbjct: 759 MFEAMIAS 766
>gi|297194047|ref|ZP_06911445.1| translocase subunit secA 1 [Streptomyces pristinaespiralis ATCC
25486]
gi|297152086|gb|EFH31525.1| translocase subunit secA 1 [Streptomyces pristinaespiralis ATCC
25486]
Length = 939
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/442 (46%), Positives = 281/442 (63%), Gaps = 41/442 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQLMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLEVGCILANMSPAQRREQYNCDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTRGEAGNQLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++GI H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAK 407
+TNMAGRGTDI LGGNP LA+
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAE 516
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 122/219 (55%), Gaps = 17/219 (7%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEAAVKAEHDEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDK 692
DEVL QR+ +Y R+ +L G E +Q+ +M +D I V+ W LD+
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLHEQVRHFMDDTIDAYIQAETVEGFAEE--WDLDR 711
Query: 693 LLKEF-----IAIAGKILDDLF---AGISGDTLLKSIEE 723
L F + I + L++ AGI+ + + SI+E
Sbjct: 712 LWGAFKQLYPVKITVEELEEAAGDRAGITAEFIADSIKE 750
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|198282541|ref|YP_002218862.1| preprotein translocase subunit SecA [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665025|ref|YP_002424732.1| Preprotein translocase subunit SecA [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|226695387|sp|B7J3W9.1|SECA_ACIF2 RecName: Full=Protein translocase subunit SecA
gi|226695388|sp|B5ELD9.1|SECA_ACIF5 RecName: Full=Protein translocase subunit SecA
gi|198247062|gb|ACH82655.1| preprotein translocase, SecA subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517238|gb|ACK77824.1| preprotein translocase, SecA subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 914
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/431 (48%), Positives = 275/431 (63%), Gaps = 35/431 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR +DVQIIGG +LH+G IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRQYDVQIIGGFMLHEGKIAEMRTGEGKTLVATLPAYLNALQGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EW+ ++HRFLGLSVG I + EERR+ Y DITY N+E GFDYLRDN+A + V
Sbjct: 141 EWVGKIHRFLGLSVGTIISDLSSEERRAAYAADITYGTNNEFGFDYLRDNMAFSPADRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R H+AI+DEVDS+LIDE R PL+ISG ++ Y K+ V YTV+ K
Sbjct: 201 RG---LHYAIIDEVDSILIDEARTPLIISGPTEENTDLYYRVDKLVGSFVVDEDYTVDEK 257
Query: 158 NNSVELTEEGIALAE--MA----LETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 210
V LTEEGI AE MA L DL+D N + AL+A YRR+ YIVR
Sbjct: 258 ARQVMLTEEGIEKAERLMAESGLLVDGDLYDLANVTLVHHLNQALRAHVIYRRETDYIVR 317
Query: 211 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 270
+G+ I++E TGR+ RRWS+G+HQAVEAKEG+ +Q ++ +A IT+Q+ F++Y KLSG
Sbjct: 318 DGEVCIVDEFTGRMMSGRRWSDGLHQAVEAKEGVAVQNENQTLASITFQNYFRMYEKLSG 377
Query: 271 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 330
MTGTA TE E +++ + V+ +PT+ P R D + T++ KW+ +++ + G
Sbjct: 378 MTGTADTEAFELNQIYGLEVVIIPTHRPVCRTDFADLIYRTSQEKWKAIVEDIRGCQQRG 437
Query: 331 RPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMA 390
+PVLVG+TS+E++E+LS LLKQ I H VLNA K REAE +AQAG A+TI+TNMA
Sbjct: 438 QPVLVGTTSIEHNEFLSHLLKQARISHEVLNA--KQHQREAEIIAQAGTPGAVTIATNMA 495
Query: 391 GRGTDIILGGN 401
GRGTDI+LGGN
Sbjct: 496 GRGTDIVLGGN 506
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 65/353 (18%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLH+IGT HESRRIDNQLRGR+GRQGDPG+TRF +SL D + + F D L+ +
Sbjct: 547 GGLHIIGTERHESRRIDNQLRGRSGRQGDPGTTRFYLSLDDPLMRIFGSDRLSG--LMQK 604
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ E IE + + + Q E F IRK L+E+D+V QR+ +Y
Sbjct: 605 LGMKEGEAIEHPWVTKSIENAQRKVESRNFDIRKQLLEYDDVANEQRRIIY--------- 655
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISG 714
QQ +M A D + E A+ +LD + A +
Sbjct: 656 ------QQRNAFMDA---------------------DDVSAEIRALRDDVLDAVLAATAP 688
Query: 715 DTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRY 774
+ +++ +LP L + ++ + +P + +WL G
Sbjct: 689 EGVMEERWDLPGLEAA-LDRIFGLQVP---------------VGQWLE------QDKGLT 726
Query: 775 RATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLS 834
A LR+ + ++++++Y +ES + E+++L++ LD W+DHL +M+ L
Sbjct: 727 HAA---LRERIMEMVLSAY--AAKESLMGSEMTRHFEKSILLQVLDSQWKDHLASMDHLR 781
Query: 835 SAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLVQYWSSPMESQEL 887
+++R + +NP +EYK + F +ML R V +L + SP ++ L
Sbjct: 782 EGIHLRGYAQKNPKQEYKRESLIMFNAMLDQLREEVVSTLSRLHVSPAPAEPL 834
>gi|23013722|ref|ZP_00053587.1| COG0653: Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Magnetospirillum magnetotacticum MS-1]
Length = 900
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 282/440 (64%), Gaps = 35/440 (7%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R FDVQ++GG VLH G I+EMKT VVTVNDYLA+RD+E
Sbjct: 82 RPFDVQLLGGMVLHQGRISEMKTGEGKTLVATLPVYLNALSAKGVHVVTVNDYLAKRDSE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +++RFLGLSVG+I GM ER+ Y CD+TY N+ELGFDYLRDN+ E++V R
Sbjct: 142 WMGQIYRFLGLSVGVIVHGMDDLERQQAYACDVTYGTNNELGFDYLRDNMKFRLEEMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AIVDEVDS+L+DE R PL+ISG + Y + K+ LV Y + K
Sbjct: 202 ---PFNYAIVDEVDSILVDEARTPLIISGPTEDNSDLYRLVDKLMPALVPE-DYEKDEKV 257
Query: 159 NSVELTEEGIALAEMALETNDL-----WD-ENDPWARFVMNALKAKEFYRRDVQYIVRNG 212
+V LT+ G E L+ DL +D N V AL+A + + RDV YIV+N
Sbjct: 258 RAVTLTDRGTEHVEEMLQAADLMKGTLYDIGNVSLVHHVNQALRAHKLFTRDVDYIVKND 317
Query: 213 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 272
K +II+E TGR+ E RR+SEG+HQA+EAKEG+ IQ ++ +A IT+Q+ F+LYPKL+GMT
Sbjct: 318 KVIIIDEFTGRMMEGRRYSEGLHQALEAKEGVTIQNENQTLASITFQNYFRLYPKLAGMT 377
Query: 273 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 332
GTA TE EF +++ + V+E+PTNL R D + + TA+ K+E +E +P
Sbjct: 378 GTAMTEAGEFAEIYNLDVVEIPTNLAVSRKDHDDEVYRTAKEKYEAIVTLIEECRGRMQP 437
Query: 333 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 392
VLVG+TS+E SE LS++LK++ IPH VLNAR Y +EA VAQAG +TI+TNMAGR
Sbjct: 438 VLVGTTSIEKSELLSEMLKKKKIPHQVLNAR--YHEQEAYIVAQAGVPGGVTIATNMAGR 495
Query: 393 GTDIILGGNPKMLAKKIIED 412
GTDI LGGN +M K + D
Sbjct: 496 GTDIQLGGNLEMRTKMELAD 515
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 104/176 (59%), Gaps = 14/176 (7%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V+ GGL+V+G+ HESRRIDNQLRGR+GRQGDPG+++F +SL+D++ + F S +
Sbjct: 539 KVRDSGGLYVVGSERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRIFG---SQRM 595
Query: 590 DLISRITNDEDMPIEGDAIV-----RQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHV 644
D + + +D G+AIV + L Q E F IRK+L++FD+V+ QRK +
Sbjct: 596 DGMLQKLGLKD----GEAIVHPWINKALEKAQQKVEARNFDIRKNLLKFDDVMNDQRKVI 651
Query: 645 YDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 700
Y+ R+ +++ + S++I + V+ E++ + + W L +E + +
Sbjct: 652 YEQRKDLMSA--DDVSEEIVAFRHEVIAEMVARCIPERAYADQWDTAALHEEVLRV 705
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ Y M+ VE+++L++ LD W++HL+ ++ L +++R++ R+PL EYK + F
Sbjct: 743 AEYSPETMRMVEKSLLLQILDQSWKEHLLQLDHLRQGISLRAYAQRDPLNEYKREAFNMF 802
Query: 860 ISML 863
ML
Sbjct: 803 EQML 806
>gi|296313497|ref|ZP_06863438.1| preprotein translocase, SecA subunit [Neisseria polysaccharea ATCC
43768]
gi|296839959|gb|EFH23897.1| preprotein translocase, SecA subunit [Neisseria polysaccharea ATCC
43768]
Length = 538
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/452 (46%), Positives = 280/452 (61%), Gaps = 42/452 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
ME ++ FLGL+VG+I M P +R++ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 GIMEPLYNFLGLTVGVIISDMQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R +FA+VDEVDS+LIDE R PL+ISG+A ++ Y + V LV+
Sbjct: 201 R---ELNFAVVDEVDSILIDEARTPLIISGQADDNIRLYQIMNTVPPHLVRQETEEGEGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDEND--------PWARFVMNALKAKEFYRR 203
Y V+ K + V L+E G AE L L END +M AL+A + +
Sbjct: 258 YWVDEKAHQVILSETGHEHAEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHK 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D Y++++G+ +I++E TGR+ RRWSEG+HQAVEAKEG++I+ ++ +A IT+Q+ F+
Sbjct: 318 DQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KLSGMTGTA TE EF ++ + + +PTN P R D Q F +A K+E +++
Sbjct: 378 LYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
E + G+PVLVG+TS+ENSE +S LL++ G+PHNVLNA+ REA VAQAG+ AI
Sbjct: 438 EECHKRGQPVLVGTTSIENSELVSHLLQKAGLPHNVLNAKEH--EREALIVAQAGKVGAI 495
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
T++TNMAGRGTDI+LGGN K I D L
Sbjct: 496 TVATNMAGRGTDIVLGGNLKHQTDAIRADETL 527
>gi|417003402|ref|ZP_11942465.1| preprotein translocase, SecA subunit [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325478594|gb|EGC81706.1| preprotein translocase, SecA subunit [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 905
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/451 (45%), Positives = 279/451 (61%), Gaps = 50/451 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
++H+ VQ++GG VLH+G IAEM+T VVTVNDYLA+RD
Sbjct: 78 LKHYPVQLLGGIVLHNGQIAEMRTGEGKTLVATLPSYLNALTGKGVHVVTVNDYLAKRDQ 137
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM +VH FLGL+VG I G+ ER+ NY DITY N++ GFDYLRDN+ + +V
Sbjct: 138 EWMGKVHTFLGLTVGCIVYGLTNNERKKNYNADITYGTNNQFGFDYLRDNMVIYKDDMVQ 197
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R H+AIVDEVDS+LIDE R PL+ISG+ + Y A + L
Sbjct: 198 R---DLHYAIVDEVDSILIDEARTPLIISGQGDESTDTYVKANDFIQTLEGRILDPNEDA 254
Query: 147 ----------VQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNAL 195
V+ + + V+ K + LTE+G A AE +L D +N A ++ NAL
Sbjct: 255 DIDPFDREFKVEDVDFLVDEKRKTSNLTEKGTAKAEKFFGIENLSDTDNIELAHYINNAL 314
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
KA RD+ Y+V +G+ I++E TGR+ + RR+S+G+HQA+EAKEG++++A+S +A
Sbjct: 315 KANTTMTRDIDYVVNHGEVEIVDEFTGRIMQGRRFSDGLHQAIEAKEGVEVKAESKTLAT 374
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KLSGMTGTAKTEE EF +++++ V+E+PTN P R D + RGK
Sbjct: 375 ITFQNYFRMYDKLSGMTGTAKTEEDEFDEIYKLDVVEIPTNRPVQRKDDVDYVYINERGK 434
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+ E+ + G+P+LVG+ S+E SE LSD LK+ GI H VLNA K REA+ VA
Sbjct: 435 YNAIIDEINRVHATGQPILVGTISIEASERLSDALKKAGISHTVLNA--KNHEREADIVA 492
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
QAGR +TI+TNMAGRGTDI+LGGN +A
Sbjct: 493 QAGRLNQVTIATNMAGRGTDIMLGGNVDHMA 523
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 6/169 (3%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +VK GGL++IG+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + +
Sbjct: 572 EAEKVKEAGGLYIIGSERHESRRIDNQLRGRSGRQGDPGRSRFFISLEDDLVR---LNGG 628
Query: 587 WAV-DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
AV + + DE+ PI + + + Q E F RK ++++D+V+ QR +Y
Sbjct: 629 EAVAKFVDKYNYDENEPIVSKMVTKAVERAQTRVEANNFATRKRVLQYDDVMNKQRTIIY 688
Query: 646 DLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
+ R+ +L G + + I ++ V++ ++ +P P W + LL
Sbjct: 689 NERREVLFG--QDMKETIIGMIKDVIENAVYTFTNPEVKPENWEMTALL 735
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 784 YLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFG 843
Y+ D +A Y + +E+++ M+EVER +L++ +D W DH+ M+++ + VR+ G
Sbjct: 764 YITDATLAKYED--KEAQFGSENMREVERVILLRVIDQKWMDHIDAMDQMRKEIGVRAMG 821
Query: 844 HRNPLEEYKIDGCRFFISMLSATRRLTVESLV 875
+P+ Y +G + M + + TV+ ++
Sbjct: 822 QEDPVRAYTNEGFEMYEDMTRSIQEDTVKYML 853
>gi|21221448|ref|NP_627227.1| preprotein translocase subunit SecA [Streptomyces coelicolor A3(2)]
gi|289771266|ref|ZP_06530644.1| preprotein translocase, SecA subunit [Streptomyces lividans TK24]
gi|61239648|sp|P0A4G6.1|SECA_STRCO RecName: Full=Protein translocase subunit SecA
gi|61239655|sp|P0A4G7.1|SECA_STRLI RecName: Full=Protein translocase subunit SecA
gi|710398|gb|AAC44331.1| SecA [Streptomyces lividans 1326]
gi|1769445|emb|CAA56209.1| secA [Streptomyces coelicolor A3(2)]
gi|7799200|emb|CAB90916.1| preprotein translocase [Streptomyces coelicolor A3(2)]
gi|289701465|gb|EFD68894.1| preprotein translocase, SecA subunit [Streptomyces lividans TK24]
Length = 947
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/460 (45%), Positives = 288/460 (62%), Gaps = 51/460 (11%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT +VTVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHMGYVAEMKTGEGKTLVGTLPAYLNALSGEGVHIVTVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL+VG I P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 LMGRVHKFLGLNVGCILANQTPAQRREMYACDITYGTNNEFGFDYLRDNMAWSKDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLKKGEAGNTLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVLDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 ----------PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
P LSGMTGTA TE EF +++++ V+ +PTN P +R D + T K
Sbjct: 377 KRHDHDGKEQPGLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAK 436
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+E ++E R G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VA
Sbjct: 437 FEAVVDDIEEKHRKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVA 494
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
QAGRK ++T++TNMAGRGTDI LGGNP+ LA+ + R L
Sbjct: 495 QAGRKGSVTVATNMAGRGTDIKLGGNPEDLAEAELRQRGL 534
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 15/218 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 549 AALERAEQAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 608
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E F RK+++++
Sbjct: 609 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVETQNFETRKNVLKY 665
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +QI + +D + P W LD+L
Sbjct: 666 DEVLNRQREVIYGERRRVLEG--EDLQEQIQHFTNDTIDAYVQAET-AEGFPEDWDLDRL 722
Query: 694 LKEF-----IAIAGKILDDLF---AGISGDTLLKSIEE 723
F + + + L++ AG++ D + +SI++
Sbjct: 723 WGAFKQLYPVKVTVEELEEAAGDRAGLTADYIAESIKD 760
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 778 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMDGI 837
Query: 867 RRLTV 871
+ +V
Sbjct: 838 KEESV 842
>gi|212640383|ref|YP_002316903.1| preprotein translocase subunit SecA [Anoxybacillus flavithermus
WK1]
gi|212561863|gb|ACJ34918.1| Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Anoxybacillus flavithermus WK1]
Length = 856
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 276/423 (65%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
M + VQ++GG LH+G+IAEMKT VVTVN+YLA RDA
Sbjct: 101 MYPYKVQLMGGIALHEGNIAEMKTGEGKTLTATMPVYLNALTGKGVHVVTVNEYLASRDA 160
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M R+++FLGLSVGL M EE+++ Y DITY N+E GFDYLRDN+ E +V
Sbjct: 161 NEMGRLYQFLGLSVGLNLNSMSREEKQAAYHADITYGTNNEFGFDYLRDNMVLYKEHMVQ 220
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P H+AI+DEVDS+LIDE R PL+ISG A K Y A L + + YT + K
Sbjct: 221 R---PLHYAIIDEVDSILIDEARTPLIISGTAQKSTKLYIQANAFVRTLKRDVDYTYDEK 277
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
SV+LTEEG+ AE A ++L+D ++ + AL+A +RDV Y+V +GK +I
Sbjct: 278 TKSVQLTEEGMNKAERAFGIDNLFDLKHVTLNHHINQALRAHVVMQRDVDYVVEDGKIVI 337
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++ TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAK
Sbjct: 338 VDPFTGRLMRGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAK 397
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M V+ +PTN P IR D P + T GK+ +++ G+PVLVG
Sbjct: 398 TEEEEFRNIYNMQVVVIPTNKPVIRDDRPDLIYRTMEGKFRAVVEDIAERHAKGQPVLVG 457
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ S+E SE LS +L ++GI HNVLNA K A+EAE +AQAG+K A+TI+TNMAGRGTDI
Sbjct: 458 TVSIETSELLSSMLTKRGIRHNVLNA--KNHAKEAEIIAQAGQKGAVTIATNMAGRGTDI 515
Query: 397 ILG 399
LG
Sbjct: 516 KLG 518
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F +
Sbjct: 518 GEGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMRRFGSENMM 577
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PI+ + + + Q E F RK L+++D+VL QR+ +Y
Sbjct: 578 A--MMDRLGMDDSQPIQSKIVSKAVESAQKRVEGNNFDARKQLLQYDDVLREQREIIYRQ 635
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLL 694
R +L +E+ + + +Q+V++ ++ + + P W++ ++
Sbjct: 636 RFQVLD--SENLRDIVEKMIQSVIERVVRMHTPDEEMPEEWNVQAIV 680
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+ESR M+E ER ++++ +D W +H+ M +L +++R++G +PL EY+++G
Sbjct: 721 KESRIPAEQMREFERVIVLRAVDMKWMEHIDAMEQLRQGIHLRAYGQIDPLREYQMEGYA 780
Query: 858 FFISMLSA 865
F +M+++
Sbjct: 781 MFEAMIAS 788
>gi|407976857|ref|ZP_11157753.1| preprotein translocase subunit SecA [Nitratireductor indicus C115]
gi|407427756|gb|EKF40444.1| preprotein translocase subunit SecA [Nitratireductor indicus C115]
Length = 908
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/436 (48%), Positives = 286/436 (65%), Gaps = 39/436 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH+GSIAEMKT VVTVNDYLA+RD+
Sbjct: 83 MRHFDVQLIGGMVLHEGSIAEMKTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLAKRDS 142
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGLS G+I GM EERR Y CDITY N+ELGFDYLRDN+ EQ+V
Sbjct: 143 EWMARLYGFLGLSTGVIVHGMSDEERREAYACDITYGTNNELGFDYLRDNMKYEREQMVQ 202
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLHYTVEL 156
R ++AIVDEVDS+LIDE R PL+ISG Y + + +L+ + Y V+
Sbjct: 203 RG---HNYAIVDEVDSILIDEARTPLIISGPLDDRSELYNTIDTFIPQLVAE--DYEVDE 257
Query: 157 KNNSVELTEEGIALAEMAL------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K + TEEG E L + + L+D EN + NALKA + ++RD YIV
Sbjct: 258 KQRTAIFTEEGTEKVENMLREAGLFKGDSLYDIENVAIVHHLNNALKAHKMFQRDKDYIV 317
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
R+G+ +II+E TGR+ RR+SEG+HQA+EAKE + IQ ++ +A IT+Q+ F++Y L+
Sbjct: 318 RDGEIVIIDEFTGRMMPGRRFSEGLHQALEAKEHVAIQPENQTLASITFQNYFRMYETLA 377
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE +EF ++ + VIE+PTNLP +R+D + + T K++ +E++
Sbjct: 378 GMTGTASTEAEEFGNIYGLEVIEIPTNLPILRLDEDDEVYRTVEEKFKAIVREIKEAHAK 437
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGI-PHNVLNARPKYAAREAETVAQAGRKYAITISTN 388
G+P+LVG+TS+E SE+L++LL+++G+ VLNAR + REA VAQAG+ A+TI+TN
Sbjct: 438 GQPILVGTTSIEKSEFLAELLRKEGVGSFEVLNAR--HHEREAFIVAQAGKPGAMTIATN 495
Query: 389 MAGRGTDIILGGNPKM 404
MAGRGTDI LGGNP+M
Sbjct: 496 MAGRGTDIQLGGNPEM 511
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGL+V+ T HESRRIDNQLRGR+GRQGDPG ++F +SLQD++ + F D ++ +
Sbjct: 548 GGLYVLATERHESRRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSDRMDG--MLQK 605
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ ED I I + L Q E F IRK+L+++D+V+ QRK V++ R ++ G
Sbjct: 606 LGLKEDEAIVHPWINKALEKAQKKVEARNFDIRKNLLKYDDVMNDQRKVVFEQRLELMDG 665
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
N S+ + + + V+D+++ N+ + W + +L
Sbjct: 666 HN--LSETVAEMRRDVIDDLVERNIPERAYAEQWKVQEL 702
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 801 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFI 860
R+ M VE++VL++TLD WR+HL+N++ L S + R + R+PL EYK + F
Sbjct: 748 RFGPEIMTYVEKSVLLQTLDHLWREHLVNLDHLRSVIGFRGYAQRDPLNEYKSEAFELFQ 807
Query: 861 SMLSATRRLTVESLVQ 876
+ML R++ L++
Sbjct: 808 AMLGNLRQVVTSQLMR 823
>gi|357413099|ref|YP_004924835.1| Preprotein translocase subunit SecA [Streptomyces flavogriseus ATCC
33331]
gi|320010468|gb|ADW05318.1| preprotein translocase, SecA subunit [Streptomyces flavogriseus
ATCC 33331]
Length = 941
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/450 (45%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQMMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLEVGCIVANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTRGEAGNPLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G++ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHEPGVSKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 SKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 15/218 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAEQAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E QI +M +D+ I W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLEG--EDLQDQIRHFMDDTIDDYIRQET-AEGFAEEWDLDRL 712
Query: 694 LKEF-----IAIAGKILDDL---FAGISGDTLLKSIEE 723
F + + + L++ AG++ D + +S+++
Sbjct: 713 WGAFKQLYPVKVTVEELEEAAGDLAGVTADFIAESVKD 750
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 775 RATTNLLRKYLGDILIASYLNVVQESRYDDVY--------------MKEVERAVLVKTLD 820
+ T L + GD L + + ES DD++ M+E+ER V++ LD
Sbjct: 723 KVTVEELEEAAGD-LAGVTADFIAESVKDDIHEQYAEREKTLGSDIMRELERRVVLSVLD 781
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
WR+HL M+ L + +R+ ++PL EY+ +G F +M+ + +V
Sbjct: 782 RKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGIKEESV 832
>gi|402824720|ref|ZP_10874062.1| preprotein translocase subunit SecA [Sphingomonas sp. LH128]
gi|402261738|gb|EJU11759.1| preprotein translocase subunit SecA [Sphingomonas sp. LH128]
Length = 916
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 276/432 (63%), Gaps = 38/432 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMIGGMVLHRGEIAEMRTGEGKTLVATAPTYLNALEGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E ME++H FLGL+VG+I + ERR Y DITY N+E GFDYLRDN+ Q+V
Sbjct: 141 EQMEKLHGFLGLTVGVIVPNLNEWERRDAYGADITYGTNNEFGFDYLRDNMKHERSQMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLHYTVEL 156
R PF+FAIVDEVDS+LIDE R PL+ISG Y V A V +LL + Y +
Sbjct: 201 R---PFNFAIVDEVDSILIDEARTPLIISGPTDDKSELYVQVDAIVKQLLPE--DYEADE 255
Query: 157 KNNSVELTEEGIALAEMALET------NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K ++ LTE+G+ AE LE ++L+D EN + ALKA ++RD YIV
Sbjct: 256 KTKNISLTEDGVEKAERMLEAAGLLEGSNLYDVENTQVVHHLDQALKAVMMFKRDTDYIV 315
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
++ K +II+E TGR+ + RRWS G+HQAVEAKEG+KI+ ++ +A IT+Q+ F++YPKLS
Sbjct: 316 KDEKVVIIDEFTGRMMDGRRWSNGLHQAVEAKEGVKIEPENQTLASITFQNYFRMYPKLS 375
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE EF +++M V+ +PTN+P RVD + + K+ + + +
Sbjct: 376 GMTGTAATEAPEFYDIYKMNVVTIPTNVPVQRVDEEDEFYKNTLDKFAAIAKLIREKYET 435
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 389
G+PVLVG+ S+E SE LSD L ++G+ H+VLNAR + EA VAQAG A+TI+TNM
Sbjct: 436 GQPVLVGTVSIEKSELLSDFLNKEGVKHSVLNAR--FHEMEAHIVAQAGSLGAVTIATNM 493
Query: 390 AGRGTDIILGGN 401
AGRGTDI LGGN
Sbjct: 494 AGRGTDIQLGGN 505
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 527 EGSEVKRL----GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 582
E E KRL GGL VIGT HESRRIDNQLRGR+GRQGDPG ++F + L+D++ + F
Sbjct: 533 EVGEQKRLVLEAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFYLCLEDDLLRIFG 592
Query: 583 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 642
DT ++ + S + + E I + + + Q E + +RK +VE+D+V+ QRK
Sbjct: 593 PDTLFSKMMNSNLADGE--AIGSKWLSKAIETAQKKVEARNYEVRKQVVEYDDVMNDQRK 650
Query: 643 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFI 698
+Y+ R I+ E+ + ++ ++ +P +W++ +LKE +
Sbjct: 651 VIYEQRSDIMDA--EAVDDVVVDMRHDTINSLVADACPAGSYPEHWNI-AVLKEKV 703
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 800 SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
S+ D ++VE+++L+ LD +W++HL ++ L V +R++ + P+ EYK + F
Sbjct: 744 SQDDPAIWRQVEKSILLDRLDHYWKEHLATLDALRQVVFLRAYAQKQPINEYKQEAFGLF 803
Query: 860 ISMLSATR 867
ML R
Sbjct: 804 ERMLDGIR 811
>gi|326804106|ref|YP_004321924.1| Preprotein translocase subunit SecA [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651116|gb|AEA01299.1| preprotein translocase, SecA subunit [Aerococcus urinae
ACS-120-V-Col10a]
Length = 790
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/427 (46%), Positives = 278/427 (65%), Gaps = 29/427 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+GG LH G+IAEMKT VVTVNDYLA+RD+ M
Sbjct: 82 YHVQIVGGLALHYGNIAEMKTGEGKTLTETMPVYLNALEGKGVHVVTVNDYLARRDSVDM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
V+RFLGL+VGL + EE+R+ Y CD+TY+ N+ELGFDYLRDN+ EQ+V R
Sbjct: 142 GEVYRFLGLTVGLNTNDLTAEEKRAAYHCDVTYSTNNELGFDYLRDNMVVYKEQMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P H+AIVDEVDS+LIDE R PL+ISG+A + A Y A + L + Y +++++ +
Sbjct: 200 -PLHYAIVDEVDSILIDEARTPLIISGQAEQSTALYQRADYFVKSLKEEEDYVIDIESKT 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ LTE+G+ AE ++L+D EN P + AL+A RD+ Y+V++ + I++
Sbjct: 259 ISLTEQGVDKAESVFHLDNLYDVENGPLIHHIDTALRANYIMIRDIDYVVQDDEVKIVDG 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ E R +S+G+HQ +EAKE + IQ +S +A IT+Q+ F++Y KL+GMTGTAKTEE
Sbjct: 319 FTGRIMEGRHYSDGLHQGIEAKENVPIQNESKTMATITFQNYFRMYDKLAGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF +++ M VI++PTN P R D + + K+ E+E+ + G+PVLVG+ +
Sbjct: 379 QEFREIYDMDVIQIPTNRPVQREDALDKIYPNLMTKFRAVADEIETRHKKGQPVLVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE LS +L ++ IPHNVLNA K AREAE +AQAG++ A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELLSRMLSERNIPHNVLNA--KNHAREAEIIAQAGQEGAVTIATNMAGRGTDIKLG 496
Query: 400 GNPKMLA 406
K L
Sbjct: 497 PGVKDLG 503
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL VIGT HESRRID+QLRGR+GRQGDPG +RF +SL+D++ ++F D
Sbjct: 496 GPGVKDLGGLAVIGTERHESRRIDDQLRGRSGRQGDPGFSRFYLSLEDDLMRRFGSDRVK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A+ + D+D+ IE + RQ+ Q E + RKS++E+DEV+ QR+ +Y
Sbjct: 556 AI-WENLHLEDDDVSIENPMLTRQVESAQKRVEGNNYDTRKSVLEYDEVMREQREIIYSQ 614
Query: 648 RQSIL 652
RQ I+
Sbjct: 615 RQQII 619
>gi|395774513|ref|ZP_10455028.1| preprotein translocase subunit SecA [Streptomyces acidiscabies
84-104]
Length = 946
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/460 (45%), Positives = 287/460 (62%), Gaps = 51/460 (11%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RHYDVQIMGGAALHMGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVHRFLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHRFLGLEVGCILANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVLRLKKGEAGNPLKGL 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHESGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVMDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PK----------LSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
+ LSGMTGTA TE EF +++++ V+ +PTN P +R D + T K
Sbjct: 377 KRADHSGKDVAGLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAK 436
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
+E ++ G+P+LVG+TSVE SEYLS L ++GI H VLNA K+ REA VA
Sbjct: 437 FEAVVDDIAEKHEKGQPILVGTTSVEKSEYLSQQLSKRGIQHEVLNA--KHHEREASIVA 494
Query: 376 QAGRKYAITISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
QAGRK A+T++TNMAGRGTDI LGGNP+ LA+ + R L
Sbjct: 495 QAGRKGAVTVATNMAGRGTDIKLGGNPEDLAEAELRQRGL 534
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 15/218 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ + E EV+ GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 549 AALEKATLAVKAEKDEVESAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 608
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 609 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 665
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E +Q+ +M +D + W LD+L
Sbjct: 666 DEVLNRQREVIYGERRRVLEG--EDLQEQVVHFMDDTIDAYVSAET-AEGFAEDWDLDRL 722
Query: 694 LKEF-----IAIAGKILDDLF---AGISGDTLLKSIEE 723
F + I + L+D AG++ + L +SI++
Sbjct: 723 WGAFKQLYPVKITVEELEDAAGDRAGLTAEFLAESIKD 760
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T L + + D + A Y + +E++ M+E+ER V++ LD WR+HL M+ L
Sbjct: 750 TAEFLAESIKDDIHAQYED--RETQLGSEIMRELERRVVLSVLDRKWREHLYEMDYLQEG 807
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
+ +R+ ++PL EY+ +G F +M+ + +V
Sbjct: 808 IGLRAMAQKDPLVEYQREGFDMFTAMMDGIKEESV 842
>gi|334344372|ref|YP_004552924.1| protein translocase subunit secA [Sphingobium chlorophenolicum L-1]
gi|334100994|gb|AEG48418.1| Protein translocase subunit secA [Sphingobium chlorophenolicum L-1]
Length = 910
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 274/441 (62%), Gaps = 36/441 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQ++GG VLH G IAEM+T VVTVNDYLA RD E
Sbjct: 82 RHYDVQMVGGIVLHRGEIAEMRTGEGKTLVATLATYLNALEGKGVHVVTVNDYLASRDCE 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM +V+RFLGL+ G+I + ++RR Y DITY N+ELGFDYLRDN+ + +V R
Sbjct: 142 WMGQVYRFLGLTTGVIVPNLSEDQRREAYNADITYATNNELGFDYLRDNMKYDRASMVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF+FAIVDEVDS+LIDE R PL+ISG Y + + L + Y + K
Sbjct: 202 ---PFNFAIVDEVDSILIDEARTPLIISGPTDDKSELYVAVDAIVKRLDEA-DYEKDEKQ 257
Query: 159 NSVELTEEGIALAEMALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V LTE+G E LE +L+D EN V AL+A +RRD+ YIV++
Sbjct: 258 RTVTLTEDGTEKIERMLEEAGLLQGANLYDFENTAVVHHVNQALRANAMFRRDIDYIVKD 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
GK +II+E TGR+ + RRWS+G+HQAVEAKEG+ I+ ++ +A IT+Q+ F++YPKL GM
Sbjct: 318 GKVIIIDEFTGRMMDGRRWSDGLHQAVEAKEGVNIEPENQTLASITFQNYFRMYPKLGGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF ++++M V+ +PTN P RVD + K+ + + G+
Sbjct: 378 TGTAATEATEFFEIYKMNVVTIPTNRPVQRVDEEDSFYKNLEDKFRGIARTIREHQEKGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+ S+E SE LS+ L Q+G+ H VLNAR + EA VAQAGRK A+TI+TNMAG
Sbjct: 438 PVLVGTVSIEKSEMLSEFLNQEGVKHAVLNAR--FHESEAHIVAQAGRKGAVTIATNMAG 495
Query: 392 RGTDIILGGNPKMLAKKIIED 412
RGTDI LGGN +M + + D
Sbjct: 496 RGTDIKLGGNLEMRVEDELRD 516
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Query: 521 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 580
E E EV GGL V+ T HESRRIDNQLRGR+GRQGDPG +RF +SL D++ +
Sbjct: 531 EAEIEAEKQEVLAAGGLFVLATERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDDLMRI 590
Query: 581 FSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 640
F DT +A + S + + E +P + + + Q E + IRK +VE+D+V+ Q
Sbjct: 591 FGPDTMFAKMIRSNLEDGEALP-PSKWLSKAIETAQKKVEARNYDIRKQVVEYDDVMNDQ 649
Query: 641 RKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
RK +Y+ R I+ E+ + V++++ + P +P W +D+L
Sbjct: 650 RKVIYEQRSDIMDA--ETVDDVVTDMRHETVNDLVGASCPPGTYPEQWDMDRL 700
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 39/67 (58%)
Query: 810 VERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 869
+E+++L+++LD W++HL ++ L V++R++ + P+ EYK + F ML R
Sbjct: 755 IEKSILLQSLDHHWKEHLSTLDALRQVVHLRAYAQKTPINEYKQEAFALFERMLGNIRED 814
Query: 870 TVESLVQ 876
S+ +
Sbjct: 815 VTGSIAR 821
>gi|408374348|ref|ZP_11172036.1| preprotein translocase subunit SecA [Alcanivorax hongdengensis
A-11-3]
gi|407765806|gb|EKF74255.1| preprotein translocase subunit SecA [Alcanivorax hongdengensis
A-11-3]
Length = 903
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/440 (47%), Positives = 273/440 (62%), Gaps = 42/440 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH+G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMLGGMSLHEGRIAEMRTGEGKTLTATLPAYLNALSGEGVHVVTVNDYLAERDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
WM ++ FLGL+VG+I E +R Y DITY N+E GFDYLRDN+A + V
Sbjct: 141 NWMRPLYEFLGLTVGVILSQQPAEMKREAYNADITYGTNNEFGFDYLRDNMAFRLDDRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLV------QGLH 151
R ++AIVDEVDS+LIDE R PL+ISG A+ Y K+ L +G H
Sbjct: 201 RG---LNYAIVDEVDSILIDEARTPLIISGPAADSSELYQAVNKLMPQLQPQPKDEEGGH 257
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDE--------NDPWARFVMNALKAKEFYRR 203
Y V+ K VELTEEG L E L +N L +E N V ALKA + +
Sbjct: 258 YFVDEKQRQVELTEEGHQLIESLLVSNGLLEEGESLYAAHNLALLHHVHAALKAHALFHK 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D YIV+ G+ +I++E TGR RRWSEGIHQAVEAKEG+ IQ ++ +A T+Q+ F+
Sbjct: 318 DRDYIVQGGQIVIVDEHTGRTMPGRRWSEGIHQAVEAKEGVNIQQENQTLASTTFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KL+GMTGTA TE EF +++ M V+ VPTN P +RVD Q + + + K++ E+
Sbjct: 378 LYNKLAGMTGTADTEAAEFRQIYGMDVVVVPTNRPMVRVDANDQVYLSLQEKFDAIAGEI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
+ + G PVLVG+ ++E SEYLS LK+ IPH VLNA K+ REA+ +AQAGR A+
Sbjct: 438 KGIVEKGAPVLVGTATIEASEYLSQRLKKDKIPHEVLNA--KFHEREAQIIAQAGRPGAV 495
Query: 384 TISTNMAGRGTDIILGGNPK 403
TI+TNMAGRGTDI+LGGNP+
Sbjct: 496 TIATNMAGRGTDIMLGGNPE 515
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+V GGLH+IGT HESRRIDNQLRGRAGRQGDPG TRF +S++D++ + F+ D
Sbjct: 542 QVLEAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGYTRFFLSMEDDLMRIFASDK--IR 599
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+L+ + + IE + R + Q E F IRK+L+E+D+V QR+ +Y R
Sbjct: 600 NLMRSLGLENGEAIEHRWVTRAIENAQRKVEGRNFDIRKNLLEYDDVANDQRRVIYSQRD 659
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIA 699
IL ES + I + VV+E++ + P W + L K A
Sbjct: 660 QILEA--ESLASSIASIREDVVEELVHNYMQPGTVEDQWDVPGLEKTLDA 707
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 43/67 (64%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E++ + ++++E+ ++++ LD W++HL +M+ L +++R + +NP +EYK +
Sbjct: 745 KEAQIGEDTLRQIEKHLMLQILDRHWKEHLASMDHLRQGIHLRGYAQKNPKQEYKKEAFT 804
Query: 858 FFISMLS 864
F ML+
Sbjct: 805 LFQEMLN 811
>gi|254724387|ref|ZP_05186171.1| preprotein translocase subunit SecA [Bacillus anthracis str. A1055]
Length = 810
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/434 (45%), Positives = 282/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQ++GG LH+G+I+EMKT VVTVN+YLAQRDA
Sbjct: 79 MRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLAQRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M ++H FLGL+VG+ M EE++ Y DITY+ N+ELGFDYLRDN+ EQ V
Sbjct: 139 NEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYLRDNMVLYKEQCVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A L Y+ ++K
Sbjct: 199 R---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I
Sbjct: 256 TKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 316 VDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P IR D F + +GK+ +++ + + G+PVLVG
Sbjct: 376 TEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMKGKFNAVVEDIVNRHKQGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE +S +L ++G+ HN+LNA K AREA+ +A+AG K A+TI+TNMAGRGTDI
Sbjct: 436 TVAIETSELISKMLTRKGVRHNILNA--KNHAREADIIAEAGMKGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKII 410
LG + K + +I
Sbjct: 494 KLGDDIKNIGLAVI 507
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G ++K +G L VIGT HESRRIDNQLRGRAGRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GDDIKNIG-LAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PIE + R + Q E + RK L+++D+VL QR+ +Y
Sbjct: 555 A--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQ 612
Query: 648 RQSILTGAN 656
RQ ++ N
Sbjct: 613 RQEVMESEN 621
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ V+ + +D W +H+ M+ L +++R++G +PL EY+++G F SM+++
Sbjct: 706 MREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFAMFESMIAS 764
>gi|393778134|ref|ZP_10366416.1| preprotein translocase subunit SecA [Ralstonia sp. PBA]
gi|392714869|gb|EIZ02461.1| preprotein translocase subunit SecA [Ralstonia sp. PBA]
Length = 932
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/446 (46%), Positives = 278/446 (62%), Gaps = 50/446 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLAQRDA
Sbjct: 81 MRHFDVQMIGGMVLHHGKIAEMRTGEGKTLTATLAVYLNALAGEGVHVVTVNDYLAQRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R++ FLGL+VG+ M +++++ Y DITY N+E GFDYLRDN+ + Q V
Sbjct: 141 EWMGRLYNFLGLTVGINLSSMSHDQKQAAYASDITYGTNNEFGFDYLRDNMVYDPGQRVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R P H+AIVDEVDS+LIDE R PL+ISG+A Y + L + +
Sbjct: 201 R---PLHYAIVDEVDSILIDEARTPLIISGQAENQTDLYRRMNGIPAFLERQIGEEKADG 257
Query: 151 -------HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----PWARFVMN----AL 195
Y V+ K++ V +TE G AE L L E + P +M+ AL
Sbjct: 258 TGVEKPGDYYVDEKSHQVYMTERGHERAETLLVEQGLLAEGESLYAPQNISLMHHLYAAL 317
Query: 196 KAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQ 255
+A + RD Y+V+NG+ +I++E TGR+ RRWS+G+HQAVEAKEG++IQ ++ +A
Sbjct: 318 RAHSLFHRDQHYVVQNGEIVIVDEFTGRLMSGRRWSDGLHQAVEAKEGVQIQQENQTLAT 377
Query: 256 ITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGK 315
IT+Q+ F++Y KL+GMTGTA TE EF +++ + + +PTN N R DL Q + T + +
Sbjct: 378 ITFQNYFRMYGKLAGMTGTADTEAYEFQEIYGLETVVIPTNRANQRKDLQDQIYKTGKER 437
Query: 316 WEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVA 375
++ +++ + G+PVLVG+TS+ENSEYLS LL + G+PH VLNA K REAE +A
Sbjct: 438 YDAVIKDIRDCYERGQPVLVGTTSIENSEYLSALLNKAGLPHQVLNA--KQHEREAEIIA 495
Query: 376 QAGRKYAITISTNMAGRGTDIILGGN 401
QAGR ITI+TNMAGRGTDI+LGGN
Sbjct: 496 QAGRPKMITIATNMAGRGTDIVLGGN 521
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
+VK GGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF +SL D++ + F+ D A+
Sbjct: 557 QVKAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDQLLRIFAGDRVRAI 616
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ R+ E PIE + R + Q E F IRK L+++D+V QRK +Y LR
Sbjct: 617 --MDRLKMPEGEPIEAGIVTRSIESAQRKVEGRNFDIRKQLLQYDDVANDQRKEIYKLRN 674
Query: 650 SIL 652
IL
Sbjct: 675 EIL 677
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%)
Query: 811 ERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATR 867
ER+V++++LD WR+HL ++ L +++R + ++P +EYK + F ++L +
Sbjct: 773 ERSVMLQSLDTHWREHLAALDHLRQGIHLRGYAQKDPKQEYKRESFELFSALLDTIK 829
>gi|346315467|ref|ZP_08856980.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
2_2_44A]
gi|345904443|gb|EGX74190.1| preprotein translocase, SecA subunit [Erysipelotrichaceae bacterium
2_2_44A]
Length = 782
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 281/431 (65%), Gaps = 30/431 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQI+G +H G IAEMKT VVTVNDYLA RDAEWM
Sbjct: 82 YKVQIMGAVAMHQGDIAEMKTGEGKTLTSTMCVYLNALSGKGVHVVTVNDYLAGRDAEWM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
+++RFLGL+VG+ R + P ++R + CDITYT NSELGFDYLRDN+ + + V+R
Sbjct: 142 GQIYRFLGLTVGVNSRPLTPSQKRDAFNCDITYTTNSELGFDYLRDNMVTDVKDRVLRG- 200
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
H AIVDEVDS+L+DE R PL+ISG A K Y A A+ L +G + ++ K
Sbjct: 201 --LHVAIVDEVDSILVDESRTPLIISGGAKKTANLYLQADAFAKRL-KGDDFEIDEKTRQ 257
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
+ L+E+G+++AE + +L+D ++ + ALKA + +V+Y+V++ + +I+++
Sbjct: 258 IMLSEKGVSVAERYFKIKNLYDVDHTQLVHHITQALKANYIMKNEVEYVVQDDEIVIVDQ 317
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR R +S+G+HQA+EAKEG+ I+ ++ +A ITYQ+ F+LY KL+GMTGTAKTEE
Sbjct: 318 FTGRTMPGRAYSDGLHQAIEAKEGVSIKEETSTLATITYQNFFRLYDKLAGMTGTAKTEE 377
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EFL ++ M VIE+PTN P R+D P FA R K+ +EV+ ++ G+PVLVG+ S
Sbjct: 378 EEFLDIYNMRVIEIPTNRPVQRIDYPDAIFANPRLKFAALVKEVKELYEKGQPVLVGTIS 437
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE + +LL+++ IPH VLNA K AREAE +A+AGR ++TI+TNMAGRGTDI L
Sbjct: 438 VETSELVHELLRKERIPHEVLNA--KNHAREAEIIAKAGRPKSVTIATNMAGRGTDIKLT 495
Query: 400 GNPKMLAKKII 410
+ L ++
Sbjct: 496 DESRALGGLVV 506
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
E + LGGL V+G+ HESRRIDNQLRGR+GRQGDPG +RF VSL+DE+ +F D +
Sbjct: 497 ESRALGGLVVLGSERHESRRIDNQLRGRSGRQGDPGYSRFYVSLKDELMIRFGGDKFEKL 556
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
+ D IE + + + Q E Y + +RK L+++D+VL QR+ +Y+ R
Sbjct: 557 -----FESMGDAQIESKMVTKSISQAQKRVEGYNYDVRKQLLDYDDVLRKQREIMYEQRN 611
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH 684
+L NE + + V+D ++ NVD +H
Sbjct: 612 FVL--ENEDVHGIVRDMIDRVIDSVVDANVDHTRH 644
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
K+ E+ ++++ +D W +H+ M++L + +++RS+ NPL+ Y +G F M +
Sbjct: 704 FKQFEKTIVLRNMDRNWIEHIDMMDKLRNGIHLRSYAQNNPLQAYIQEGYEMFEEMQARI 763
Query: 867 RRLTV 871
R V
Sbjct: 764 AREVV 768
>gi|421551143|ref|ZP_15997143.1| preprotein translocase, SecA subunit [Neisseria meningitidis 69166]
gi|433471860|ref|ZP_20429243.1| preprotein translocase, SecA subunit [Neisseria meningitidis 68094]
gi|433477987|ref|ZP_20435304.1| preprotein translocase, SecA subunit [Neisseria meningitidis 70012]
gi|433526444|ref|ZP_20483073.1| preprotein translocase, SecA subunit [Neisseria meningitidis 69096]
gi|433539305|ref|ZP_20495779.1| preprotein translocase, SecA subunit [Neisseria meningitidis 70030]
gi|402328677|gb|EJU64044.1| preprotein translocase, SecA subunit [Neisseria meningitidis 69166]
gi|432207817|gb|ELK63805.1| preprotein translocase, SecA subunit [Neisseria meningitidis 68094]
gi|432214392|gb|ELK70293.1| preprotein translocase, SecA subunit [Neisseria meningitidis 70012]
gi|432260204|gb|ELL15464.1| preprotein translocase, SecA subunit [Neisseria meningitidis 69096]
gi|432272797|gb|ELL27903.1| preprotein translocase, SecA subunit [Neisseria meningitidis 70030]
Length = 916
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/452 (46%), Positives = 280/452 (61%), Gaps = 42/452 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
ME ++ FLGL+VG+I M P +R++ Y DITY N+E GFDYLRDN+ N V
Sbjct: 141 GIMEPLYNFLGLTVGVIISDMQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTNQYDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R +FA+VDEVDS+LIDE R PL+ISG+A ++ Y + V LV+
Sbjct: 201 R---ELNFAVVDEVDSILIDEARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDEND--------PWARFVMNALKAKEFYRR 203
Y V+ K + V L+E G AE L L END +M AL+A + +
Sbjct: 258 YWVDEKAHQVILSEAGHEHAEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHK 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D Y++++G+ +I++E TGR+ RRWSEG+HQAVEAKEG++I+ ++ +A IT+Q+ F+
Sbjct: 318 DQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KLSGMTGTA TE EF ++ + + +PTN P R D Q F +A K+E +++
Sbjct: 378 LYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPIQRKDFNDQIFRSAEEKFEAVVKDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
E + G+PVLVG+TS+ENSE +S LL++ G+PHNVLNA K REA VAQAG+ AI
Sbjct: 438 EECHKRGQPVLVGTTSIENSELVSHLLQKAGLPHNVLNA--KEHEREALIVAQAGKVGAI 495
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
T++TNMAGRGTDI+LGGN K I D L
Sbjct: 496 TVATNMAGRGTDIVLGGNLKHQTDAIRADEAL 527
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 154/343 (44%), Gaps = 85/343 (24%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S +D + + F+ D +
Sbjct: 546 EHDKVMEAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRA 605
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A+ ++R+ + + IE + + RQ+ G Q E F +RK ++E+D+V QRK +Y
Sbjct: 606 AAI--LNRLAPERGVAIEHNLLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYS 663
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R ILT S+ I MQ + +++ VD Y D + +++
Sbjct: 664 QRNEILT------SKDISDLMQEIRSDVVSDLVDT-----YMPPDSMEEQW--------- 703
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL----A 762
D+P N R ++ WL A
Sbjct: 704 --------------------------------DIPTLENRLAAEFRLHEDIQSWLKADNA 731
Query: 763 ICSDDLTK------NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
I D+ + Y A T L+ K M + ER V++
Sbjct: 732 IDGQDIKERLIERIENEYAAKTELVGKQA---------------------MADFERNVML 770
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ +D WR+HL M+ L +++RS+ +NP +EYK + F
Sbjct: 771 QVIDNQWREHLAAMDYLRQGIHLRSYAQKNPKQEYKREAFTMF 813
>gi|269219803|ref|ZP_06163657.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
848 str. F0332]
gi|269210708|gb|EEZ77048.1| preprotein translocase, SecA subunit [Actinomyces sp. oral taxon
848 str. F0332]
Length = 945
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 284/439 (64%), Gaps = 30/439 (6%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQI+GGA LH G+IAEMKT VVTVNDYLA +E
Sbjct: 81 RPYDVQIMGGAALHLGNIAEMKTGEGKTLVATLPSYLNALTGKGVHVVTVNDYLASYQSE 140
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M R+HRFLGL+ G I G +ERR Y DITY N+E GFDYLRDN+A + LV R
Sbjct: 141 LMGRIHRFLGLTTGCILTGQDSDERRKEYAADITYGTNNEFGFDYLRDNMAWQTSDLVQR 200
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELK 157
+F IVDEVDS+LIDE R PL+ISG A D + Y A++A + + Y V+ K
Sbjct: 201 G---HNFVIVDEVDSILIDEARTPLIISGPAEGDADKWYSEFARLALRMRKDTDYEVDEK 257
Query: 158 NNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V + E GI E L ++L++ N P ++ NA+KAKE + RD YIVR+G+ LI
Sbjct: 258 KRTVGILEPGIDKVEDLLGIDNLYESLNTPLIGYLNNAIKAKELFVRDKDYIVRDGEVLI 317
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
++E TGRV RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KLSGMTGTA+
Sbjct: 318 VDEHTGRVLPGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYDKLSGMTGTAE 377
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EF +++ V+ +PTN+P IR D F + + K + ++++ + +G+PVLVG
Sbjct: 378 TEAEEFASTYKLGVVPIPTNMPMIREDKVDYVFPSRKSKLKAIVEDIKERYEVGQPVLVG 437
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+TSVE SE LS LL +PH VLNA K REA VA+AGRK ++T++TNMAGRGTDI
Sbjct: 438 TTSVEKSEELSKLLCDARVPHQVLNA--KQHEREAAVVAEAGRKGSVTVATNMAGRGTDI 495
Query: 397 ILGGNPKMLAKKIIEDRLL 415
+LGGNP+ A ++ R L
Sbjct: 496 MLGGNPEHRAVAALKSRGL 514
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 8/209 (3%)
Query: 530 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 589
EV LGGL+V+G+ HESRRIDNQLRGR+GRQGDPG +RF +SL+D++ + F+ T A
Sbjct: 544 EVVELGGLYVLGSERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFA--TGIAQ 601
Query: 590 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 649
++ ED P+E I + + Q S E IRK+++++D+V+ QR VY R+
Sbjct: 602 RALNPSIYPEDEPLEFKIISKSIERAQTSIESRNAEIRKNVLKYDDVMNEQRNVVYAERR 661
Query: 650 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI--AGKILDD 707
IL G E + ++ VV++I+ G P W LDK E G +++
Sbjct: 662 RILEG--EDLEAMVEGFLDYVVEDIV-GVHTQSDAPDEWDLDKAWIELKGFYRPGFTVEE 718
Query: 708 LFAGISGDTLLKSIEELPELNSIDINNFY 736
L + G + L+ L EL + DI+ Y
Sbjct: 719 LIDEVGGVSKLEREHVLDELKT-DIHTNY 746
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ R+PL EYK +G F +M
Sbjct: 758 MRELERQVILNVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYKSEGYDMFQAMNDGI 817
Query: 867 RRLTVESLVQYWSSPMESQE 886
+ +V L + P E +E
Sbjct: 818 KEESVRYLFNF-ELPSEREE 836
>gi|347525096|ref|YP_004831844.1| protein translocase subunit SecA [Lactobacillus ruminis ATCC 27782]
gi|345284055|gb|AEN77908.1| Protein translocase subunit SecA [Lactobacillus ruminis ATCC 27782]
Length = 787
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/420 (47%), Positives = 277/420 (65%), Gaps = 29/420 (6%)
Query: 4 FDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAEWM 40
+ VQIIGG VLH+G+IAEMKT VVTVN+YL+ RDA M
Sbjct: 82 YHVQIIGGIVLHEGNIAEMKTGEGKTLTATMPVYLNALAGEGVHVVTVNEYLSSRDATEM 141
Query: 41 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 100
++ +LGLSVGL G PEE+R Y CDITY+ NSELGFDYLRDN+ E++V R
Sbjct: 142 GELYNWLGLSVGLNITGKTPEEKREAYNCDITYSTNSELGFDYLRDNMVVYREEMVQR-- 199
Query: 101 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNS 160
P +F IVDEVDS+LIDE R PL+ISG++S Y + A+ L + + ++L++ +
Sbjct: 200 -PLNFCIVDEVDSILIDEARTPLIISGQSSGTTLDYTRTDRFAKTLEKDTDFKIDLESKT 258
Query: 161 VELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINE 219
V LTE+GI E T +L+D +N + NAL+A RD Y+V++GK LI+++
Sbjct: 259 VSLTEKGIRKGEQYFGTQNLFDPDNTALNHHLDNALRANYIMIRDKDYVVQDGKVLIVDQ 318
Query: 220 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEE 279
TGR+ + RR+S+G+HQA+EAKE ++I+ ++ +A ITYQ+ F++Y KLSGMTGTAKTEE
Sbjct: 319 FTGRIMDGRRYSDGLHQAIEAKEHVEIEEETKTMANITYQNFFRMYKKLSGMTGTAKTEE 378
Query: 280 KEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTS 339
+EF +++ M VI +PTN P IR D P + + K++ ++++ G+P+LVG+ +
Sbjct: 379 EEFREIYNMEVISIPTNKPVIRDDRPDILYPNLKSKFKAVVEDIKERHAKGQPILVGTVA 438
Query: 340 VENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILG 399
VE SE LS +L Q G+PH VLNA K A+EAE + AG++ A+TI+TNMAGRGTDI LG
Sbjct: 439 VETSELLSAMLDQAGVPHAVLNA--KNHAKEAEIIMNAGQRGAVTIATNMAGRGTDIKLG 496
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+D++ +F D
Sbjct: 496 GPGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDDLMLRFGTDRVK 555
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
L + +DED I+ I +Q+ Q E + +RK ++++D+V+ QR+ +Y
Sbjct: 556 RF-LETMNLDDEDAVIQSKMITKQVESAQKRVEGNNYDMRKQVLQYDDVMRAQREVIYKQ 614
Query: 648 RQSIL 652
RQ ++
Sbjct: 615 RQQVI 619
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 777 TTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSA 836
T + + YL D A+Y ++ YD M E E+ V+++ +D W DH+ M++L +
Sbjct: 680 TVDEMVSYLMDRAEANY-KTKEKQLYDASQMLEFEKVVILRVVDSHWTDHIDEMDQLRQS 738
Query: 837 VNVRSFGHRNPLEEYKIDGCRFFISMLS 864
+ +R +G NPL EY+ DG + F M+
Sbjct: 739 IGLRGYGQLNPLVEYQSDGFKMFEQMIG 766
>gi|433522252|ref|ZP_20478938.1| preprotein translocase, SecA subunit [Neisseria meningitidis 61103]
gi|432258442|gb|ELL13726.1| preprotein translocase, SecA subunit [Neisseria meningitidis 61103]
Length = 916
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/452 (46%), Positives = 280/452 (61%), Gaps = 42/452 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
ME ++ FLGL+VG+I M P +R++ Y DITY N+E GFDYLRDN+ N V
Sbjct: 141 GIMEPLYNFLGLTVGVIISDMQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTNQYDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R +FA+VDEVDS+LIDE R PL+ISG+A ++ Y + V LV+
Sbjct: 201 R---ELNFAVVDEVDSILIDEARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDEND--------PWARFVMNALKAKEFYRR 203
Y V+ K + V L+E G AE L L END +M AL+A + +
Sbjct: 258 YWVDEKAHQVILSEAGHEHAEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHK 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D Y++++G+ +I++E TGR+ RRWSEG+HQAVEAKEG++I+ ++ +A IT+Q+ F+
Sbjct: 318 DQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KLSGMTGTA TE EF ++ + + +PTN P R D Q F +A K+E +++
Sbjct: 378 LYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
E + G+PVLVG+TS+ENSE +S LL++ G+PHNVLNA K REA VAQAG+ AI
Sbjct: 438 EECHKRGQPVLVGTTSIENSELVSHLLQKAGLPHNVLNA--KEHEREALIVAQAGKVGAI 495
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
T++TNMAGRGTDI+LGGN K I D L
Sbjct: 496 TVATNMAGRGTDIVLGGNLKHQTDAIRADETL 527
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 8/159 (5%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S +D + + F+ D +
Sbjct: 546 EHDKVMEAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRA 605
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A+ ++R+ + + I+ + + RQ+ G Q E F +RK ++E+D+V QRK +Y
Sbjct: 606 AAI--LNRLAPERGVAIKHNLLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYS 663
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHP 685
R ILT S+ I M+ + ++I G VD P
Sbjct: 664 QRNEILT------SKDISDLMKEIRFDVIGGLVDIYMPP 696
>gi|291522079|emb|CBK80372.1| protein translocase subunit secA [Coprococcus catus GD/7]
Length = 867
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 283/455 (62%), Gaps = 50/455 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRH+ VQ+IGG +LH G IAEMKT +VTVNDYLA RDA
Sbjct: 79 MRHYRVQLIGGVILHQGRIAEMKTGEGKTLVSTLPAYLNALEGKGVHIVTVNDYLANRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM VHRFLGLSVG+I M P+ERR+ Y+CDITY N+ELGFDYLRDN+A +QLV
Sbjct: 139 EWMGEVHRFLGLSVGVILNSMNPDERRAAYQCDITYATNNELGFDYLRDNMAVYEKQLVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R ++AI+DEVDSVLIDE R PL+ISG++ K A Y +A+ + +G
Sbjct: 199 R---ELNYAIIDEVDSVLIDEARTPLIISGQSGKSTALYNTCDYLAKRMTKGERKGEINK 255
Query: 152 --------------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-ALK 196
+ V K V LTE+G+ E N+L D ++ + VM AL+
Sbjct: 256 MTVMMGEEIEETGDFIVNEKEKHVVLTEQGVKKVEEYFHLNNLADADNLEIQHVMTLALR 315
Query: 197 AKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI 256
A RD Y+V++G+ LI++E TGR+ RR+S+G+HQA+EAKEG++++ +S +A I
Sbjct: 316 ANYLMFRDKNYVVKDGEVLIVDEFTGRIMPGRRYSDGLHQAIEAKEGVEVKRESRTLATI 375
Query: 257 TYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKW 316
T Q+ F Y K +GMTGTA TEE+EF +++ + VIE+P N IRVD F T R K
Sbjct: 376 TLQNFFNKYNKTAGMTGTALTEEEEFREIYGLDVIEIPPNKKVIRVDHDDLVFGTHREKI 435
Query: 317 EYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQ 376
+E+ + G+PVLVG+ ++E SE +S+ L+++GIPH VLNA K+ +EAE VA
Sbjct: 436 NAIVEEIIETHKKGQPVLVGTITIEGSEEISNRLRKEGIPHTVLNA--KFHEKEAEIVAH 493
Query: 377 AGRKYAITISTNMAGRGTDIILG-GNPKMLAKKII 410
AG + A+TI+TNMAGRGTDI LG G ++ KII
Sbjct: 494 AGERGAVTIATNMAGRGTDIKLGDGVAELGGLKII 528
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL +IGT HESRRIDNQLRGRAGRQGDPG TRF +SL+D++ + F D
Sbjct: 516 GDGVAELGGLKIIGTERHESRRIDNQLRGRAGRQGDPGDTRFFISLEDDLMRLFGSDKMM 575
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
V + +++++ M IE + + Q E F IRK+L+E+D+V QR+ +Y+
Sbjct: 576 KV--FNALSHEDGMAIEHKMLSNAVEKAQKKIESNNFAIRKNLLEYDQVNNEQRELIYEE 633
Query: 648 RQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYW 688
R+ +L G ES +I + + VV I +D + P W
Sbjct: 634 RRRVLKG--ESMHDEIVRMIGDVVKAEINDVIDEGQTPAEW 672
>gi|345000046|ref|YP_004802900.1| preprotein translocase subunit SecA [Streptomyces sp. SirexAA-E]
gi|344315672|gb|AEN10360.1| preprotein translocase, SecA subunit [Streptomyces sp. SirexAA-E]
Length = 942
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 282/450 (62%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RH+DVQI+GGA LH G +AEMKT ++TVNDYLA RD+E
Sbjct: 80 RHYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPAYLNALSGEGVHLITVNDYLASRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL VG I M P +RR Y CDITY N+E GFDYLRDN+A + E+LV R
Sbjct: 140 MMGRVHKFLGLEVGCIIANMTPAQRREQYACDITYGTNNEFGFDYLRDNMAWSQEELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FAIVDEVDS+L+DE R PL+ISG A + Y AK+ L +G
Sbjct: 200 G---HNFAIVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVTRLTKGEAGNPLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G++ E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVAIHEPGVSKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P R D + T K+ ++
Sbjct: 377 NKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMQRADQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHDKGQPILVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREATIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 15/218 (6%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEEAVRAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ F RK+++++
Sbjct: 599 DDLMRLFK---AQMVERVMSMANVPDDVPIENKMVTRAIASAQSQVEQQNFETRKNVLKY 655
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR+ +Y R+ +L G E QI +M +D+ I W LD+L
Sbjct: 656 DEVLNRQREVIYGERRRVLAG--EDLQDQIRHFMDDTIDDYIRQET-AEGFSEEWDLDRL 712
Query: 694 LKEF-----IAIAGKILDDL---FAGISGDTLLKSIEE 723
F + + + L++ AG++ D + +S+++
Sbjct: 713 WSAFKQLYPVKVTVEELEEAAGDLAGVTADFIAESVKD 750
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 775 RATTNLLRKYLGDILIASYLNVVQESRYDDVY--------------MKEVERAVLVKTLD 820
+ T L + GD L + + ES DD++ M+E+ER V++ LD
Sbjct: 723 KVTVEELEEAAGD-LAGVTADFIAESVKDDIHAQYEEREKTLGSEIMRELERRVVLSVLD 781
Query: 821 CFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
WR+HL M+ L + +R+ ++PL EY+ +G F +M+ + +V
Sbjct: 782 RKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGIKEESV 832
>gi|407795336|ref|ZP_11142295.1| preprotein translocase subunit SecA [Salimicrobium sp. MJ3]
gi|407020221|gb|EKE32934.1| preprotein translocase subunit SecA [Salimicrobium sp. MJ3]
Length = 837
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 273/423 (64%), Gaps = 29/423 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQI+G +H+G+IAEMKT +VTVNDYLA RD+
Sbjct: 80 MRPFPVQIMGAISMHEGNIAEMKTGEGKTLASTMPAYLNALSGEGVHIVTVNDYLASRDS 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M ++ FLGL+ GL G+ EE+R+ Y DITY N+E GFDYLRDN+ EQ+V
Sbjct: 140 EDMGELYDFLGLTTGLNANGLSKEEKRAAYNADITYGTNNEYGFDYLRDNMVLYKEQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P FAI+DEVDS+LIDE R PL+ISG A K Y A LL +T + K
Sbjct: 200 R---PLPFAIIDEVDSILIDEARTPLIISGTAKKSADMYNAANAFVRLLKIDEDFTYDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V+LTE+GI AE + +L+D N + LKA+E RD Y+V++G+ +I
Sbjct: 257 TKNVQLTEDGIDKAERYFKIENLFDLGNVALIHHINQGLKAQETMHRDADYVVQDGEVVI 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+S+G+HQA+EAKEGL IQ +S+ +A IT+Q+ F++Y K++GMTGTAK
Sbjct: 317 VDQFTGRLMQGRRYSDGLHQAIEAKEGLPIQNESMTLASITFQNFFRMYDKIAGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TE +EFL ++ M V+++PTN P IR D + T GK+ +E++ + G+PVLVG
Sbjct: 377 TEAEEFLSIYNMHVVQIPTNKPIIREDHADLVYKTTDGKFRAVVEEIKERYEKGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S LK+ G+PHNVLNA+ + REAE + AG+K AITI+TNMAGRGTDI
Sbjct: 437 TVAVETSEIISRYLKKAGVPHNVLNAKNHF--REAEIIENAGQKGAITIATNMAGRGTDI 494
Query: 397 ILG 399
LG
Sbjct: 495 KLG 497
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G V LGGL VIGT HESRRIDNQLRGR+GRQGDPG +RF +S DE+ ++F+ D
Sbjct: 497 GEGVVDLGGLAVIGTERHESRRIDNQLRGRSGRQGDPGMSRFYLSTDDELMRRFASDNVR 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
+ ++ R+ D+ PIE I R + Q E F RK+++ FD+VL QR+ +Y
Sbjct: 557 S--MMERLGMDDSQPIESKMISRAVESAQRRVEGNNFDARKTILSFDDVLRQQREVIYKQ 614
Query: 648 RQSILTGAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAG 702
R +LT N E Q I + + V VD W +D + L+ + + G
Sbjct: 615 RYEVLTSENLREIVEQMIARTVARTVQAHTADEVD-----ENWEIDAIVNYLRSNLLMEG 669
Query: 703 KILDDLFAGISGDTLLKSIEELPEL 727
I +D G K EE+ EL
Sbjct: 670 DISEDDLKG-------KEPEEMEEL 687
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 42/59 (71%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ +L++T+D W DH+ M++L +++R++G +PL+EY+++G R F M+ A
Sbjct: 708 MREFEKVILLRTVDQKWMDHIDQMDQLRQGIHLRAYGQNDPLQEYQMEGFRMFEEMVQA 766
>gi|296329303|ref|ZP_06871804.1| preprotein translocase subunit SecA [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153659|gb|EFG94476.1| preprotein translocase subunit SecA [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 869
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/453 (45%), Positives = 287/453 (63%), Gaps = 52/453 (11%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
+RH+DVQ+IGG VLH G I EMKT V+TVNDYLA+RD
Sbjct: 81 LRHYDVQLIGGMVLHQGKITEMKTGEGKTLVATCPVYLNALAGHGIHVITVNDYLAKRDR 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M R++ FLGLS G+I G+ ++R+ +Y DITY NSE GFDYLRDN+ ++ +Q V
Sbjct: 141 DQMSRLYGFLGLSSGVILNGLPTDQRKKSYNSDITYGTNSEFGFDYLRDNMVSSLDQKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------ 151
R +F IVDEVDS+LIDE R PL+ISG A + Y ++ +V +L +
Sbjct: 201 R---ELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQISFQVVSMLNRSYETEKIKN 257
Query: 152 ----------------YTVELKNNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNA 194
Y V+ K+ + TE+G+ E L+ ++L+ E F+ A
Sbjct: 258 IKEKKAMNIPDEKWGDYEVDEKSRVIVFTEKGVKRVEEILKIDNLYAPEYVELTHFLNQA 317
Query: 195 LKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVV 253
LKAKE ++RD Y+VR NG+ +II+E TGR E RR+S+G+HQA+EAKEG+KI +++ +
Sbjct: 318 LKAKELFKRDRDYLVRDNGEVVIIDEFTGRAMEGRRYSDGLHQAIEAKEGVKIASENQTL 377
Query: 254 AQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATAR 313
A IT Q+ F++Y KLSGMTGTA+TE EF+ + + V+ +PTNLP IR D + T +
Sbjct: 378 ATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVVVIPTNLPVIRKDDADLVYKTKK 437
Query: 314 GKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAET 373
K ++ ++ G+PVL+G+ S+++SE LS+LLK++ I HNVLNA KY A+EAE
Sbjct: 438 EKINSIIDRIQGLYEKGQPVLIGTISIKSSEELSELLKKRKISHNVLNA--KYHAKEAEI 495
Query: 374 VAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
VAQAGR A+TI+TNMAGRGTDI+LGGNP+ +A
Sbjct: 496 VAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMA 528
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 160/365 (43%), Gaps = 69/365 (18%)
Query: 501 AMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGR 560
A+ +G + V + C+ E +V LGGL ++GT HESRRIDNQLRGR+GR
Sbjct: 528 ALAEVGSRDDEKFSEVFSKYQEQCAIEKEQVLALGGLFILGTERHESRRIDNQLRGRSGR 587
Query: 561 QGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAE 620
QGDPG + F +SL+D++ + F + + + R+ E PI I + Q E
Sbjct: 588 QGDPGESEFYLSLEDDLMRLFG--SERVMIWMDRLKLPEGEPITHRMINSAIEKAQKKIE 645
Query: 621 KYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVD 680
FGIRK+L+EFD+V+ Q R +I NE+ + +D
Sbjct: 646 ARNFGIRKNLLEFDDVMNKQ-------RTAIYESRNEALA------------------ID 680
Query: 681 PLKHPRYWSLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDL 740
LK +IL L I+ K E+ E ID N Y D
Sbjct: 681 NLKD------------------RILGMLQRNITEKVYEKFAPEMREDWDIDGLNEYLKDF 722
Query: 741 PKPPNLFRGIRRKSSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQES 800
++ DD R+T + + + L+ Y N +E+
Sbjct: 723 -------------------YVYEERDD---KAYLRSTKEEYIERIYNALVEQYNN--KEA 758
Query: 801 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFI 860
M+++E+ +L +D WR HL +++ L ++ +R++G R+P+ EYK+ + F
Sbjct: 759 ELGSDLMRKLEKHILFDVVDNRWRGHLKSLDALRESIYLRAYGQRDPVTEYKLISSQIFE 818
Query: 861 SMLSA 865
M++
Sbjct: 819 EMIAT 823
>gi|294812925|ref|ZP_06771568.1| Protein translocase subunit secA [Streptomyces clavuligerus ATCC
27064]
gi|294325524|gb|EFG07167.1| Protein translocase subunit secA [Streptomyces clavuligerus ATCC
27064]
Length = 928
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/450 (46%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQI+GGA LH G +AEMKT ++TVNDYLAQRD+E
Sbjct: 73 RPYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLAQRDSE 132
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + E+LV R
Sbjct: 133 VMGRVHKFLGLSVGCILANMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSQEELVQR 192
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ + L +G
Sbjct: 193 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVKRLTRGEPGNHLKGI 249
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 250 EETGDYEVDEKKRTVGIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 309
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F LY
Sbjct: 310 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFLLY 369
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 370 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAKFAAVVDDIAE 429
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+PVLVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 430 KHEKGQPVLVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREAVIVAQAGRKGAVTV 487
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 488 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 517
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 532 AALEKAEQAVKAEFEEVKSLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 591
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 592 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 649
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDKL 693
+VL QRK +Y R+ +L G E +QI +M +D I V+ W LD+L
Sbjct: 650 DVLNRQRKVIYAERRRVLEG--EDLHEQIQHFMDDTIDAYIQAETVEGFAEE--WDLDRL 705
Query: 694 LKEF 697
F
Sbjct: 706 WGAF 709
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 761 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMDGI 820
Query: 867 RRLTV 871
+ +V
Sbjct: 821 KEESV 825
>gi|340778142|ref|ZP_08698085.1| preprotein translocase subunit SecA [Acetobacter aceti NBRC 14818]
Length = 906
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 277/435 (63%), Gaps = 36/435 (8%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLH G IAEM+T VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHSGKIAEMRTGEGKTLVATLAVYLNALSGKGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
E M R++ FLGL+ G I + E RR+ Y CDITY N+E GFDYLRDN+ +++V
Sbjct: 141 EEMSRLYSFLGLTTGTIVPNLPDEARRAAYACDITYGTNNEFGFDYLRDNMKYRLDEMVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLHYTVEL 156
R PF+ AIVDEVDS+LIDE R PL+ISG A Y V A +AEL+ Y +
Sbjct: 201 R---PFNHAIVDEVDSILIDEARTPLIISGPAEDSSELYRAVDAVMAELVRDPTTYDKDE 257
Query: 157 KNNSVELTEEG------IALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 209
K + LTE G + A L L+D +N VM +L+A + RDV YIV
Sbjct: 258 KLRTAILTEAGSDKVEELLRASGVLSDGGLYDVQNVAVVHHVMQSLRAHTLFSRDVDYIV 317
Query: 210 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 269
R+GK II+E TGR+ + RR+S+G+HQA+EAKE +++Q ++ +A IT+Q+ F+LYPKLS
Sbjct: 318 RDGKVTIIDEFTGRMMDGRRYSDGLHQALEAKEHVEVQQENQTLASITFQNYFRLYPKLS 377
Query: 270 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 329
GMTGTA TE EF +++++ V+E+PTNLP R D + + K+ + VE + +
Sbjct: 378 GMTGTAMTEADEFAEIYKLDVVEIPTNLPVARKDTDDEIYLDEPQKFAAVVKLVEEVHKG 437
Query: 330 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 389
G+P+LVG+TSVE SE LS LLK+ IPHNVLNAR + EA VAQAG AITI+TNM
Sbjct: 438 GQPILVGTTSVEKSEALSALLKRNNIPHNVLNAR--FHEMEAAIVAQAGAPGAITIATNM 495
Query: 390 AGRGTDIILGGNPKM 404
AGRGTDI LGGN +M
Sbjct: 496 AGRGTDIKLGGNVEM 510
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 12/127 (9%)
Query: 531 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 590
VK GGL+VIGT HESRRIDNQLRGRAGRQGDPG++RF VSLQD++ + F D
Sbjct: 543 VKSAGGLYVIGTERHESRRIDNQLRGRAGRQGDPGNSRFFVSLQDDLMRIFGSDRMTG-- 600
Query: 591 LISRITNDEDMPIEGDAIVRQLLG-----LQISAEKYYFGIRKSLVEFDEVLEVQRKHVY 645
++ ++ +G+AIV L Q E F +RK+ +++D+V+ QRK VY
Sbjct: 601 MLQKMGMQ-----DGEAIVHPWLNKALERAQKKVEARNFDMRKNTLKYDDVMNDQRKEVY 655
Query: 646 DLRQSIL 652
R+ +
Sbjct: 656 AQRREFM 662
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 791 ASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEE 850
A+ V+ + + M+ +E+ +L+ T D W++HL +++L + +R++G ++PL E
Sbjct: 737 AAQAQAVRTTNFGPEIMRYLEKQILLTTFDSVWKEHLHALDQLRQGIGLRAYGQKDPLNE 796
Query: 851 YKIDGCRFFISMLSATRRLTVESLVQYWSSP 881
YK + + F ML R + L + +P
Sbjct: 797 YKHEAFQLFTFMLDEMRERVITLLARVEMAP 827
>gi|254392870|ref|ZP_05008039.1| preprotein translocase subunit secA [Streptomyces clavuligerus ATCC
27064]
gi|326441396|ref|ZP_08216130.1| preprotein translocase subunit SecA [Streptomyces clavuligerus ATCC
27064]
gi|197706526|gb|EDY52338.1| preprotein translocase subunit secA [Streptomyces clavuligerus ATCC
27064]
Length = 935
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/450 (46%), Positives = 284/450 (63%), Gaps = 41/450 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQI+GGA LH G +AEMKT ++TVNDYLAQRD+E
Sbjct: 80 RPYDVQIMGGAALHLGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLAQRDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGLSVG I M P +RR Y CDITY N+E GFDYLRDN+A + E+LV R
Sbjct: 140 VMGRVHKFLGLSVGCILANMTPAQRREQYGCDITYGTNNEFGFDYLRDNMAWSQEELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A + Y AK+ + L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADQATKWYGDFAKLVKRLTRGEPGNHLKGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G+A E L ++L++ N P ++ NA+KAKE +++D
Sbjct: 257 EETGDYEVDEKKRTVGIHEAGVAKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKKDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG+ I+ ++ +A IT Q+ F LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVDIKDENQTLATITLQNFFLLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R D + T K+ ++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRKDQSDLIYRTEVAKFAAVVDDIAE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+PVLVG+TSVE SEYLS L ++G+ H VLNA K REA VAQAGRK A+T+
Sbjct: 437 KHEKGQPVLVGTTSVEKSEYLSQQLSKRGVQHEVLNA--KQHDREAVIVAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
+TNMAGRGTDI LGGNP LA+ + R L
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAEAELRQRGL 524
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALEKAEQAVKAEFEEVKSLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDKL 693
+VL QRK +Y R+ +L G E +QI +M +D I V+ W LD+L
Sbjct: 657 DVLNRQRKVIYAERRRVLEG--EDLHEQIQHFMDDTIDAYIQAETVEGFAEE--WDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WGAF 716
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMDGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|29829107|ref|NP_823741.1| preprotein translocase subunit SecA [Streptomyces avermitilis
MA-4680]
gi|81838438|sp|Q82K39.1|SECA2_STRAW RecName: Full=Protein translocase subunit SecA 2
gi|29606213|dbj|BAC70276.1| putative preprotein translocase SecA subunit [Streptomyces
avermitilis MA-4680]
Length = 920
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/459 (45%), Positives = 286/459 (62%), Gaps = 58/459 (12%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GGA LH G+IAEM+T +VTVNDYLA+RDA
Sbjct: 85 MRHFDVQLMGGAALHFGNIAEMQTGEGKTLVGTLPVYLNALTGKGVHLVTVNDYLAERDA 144
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM R +RFLGL+VG+I+ P ERR+ Y CDITY N+E GFDYLRDN+A + ++LV
Sbjct: 145 EWMGRAYRFLGLTVGVIKSQSTPAERRAQYACDITYGTNTEFGFDYLRDNMAWSQDELVQ 204
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------- 146
R HFAIVDE DS+LIDE R PL+ISG A + Y AK+ +
Sbjct: 205 RG---HHFAIVDEADSILIDEARTPLIISGPADQPTQWYGAFAKLVTRMRGVRVQEEQFV 261
Query: 147 ----------VQGLH-YTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNA 194
++ H Y + K +V + + G+ + L L++ E+ + NA
Sbjct: 262 TPADKDRLAHLRTTHDYEYDPKKRTVAILDRGVEYLQDQLGIESLYESEHTSLIGHLNNA 321
Query: 195 LKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKE-------GLKIQ 247
LKAKE +R+D Y+V +G+ LI++E TGR+ RR++EG+HQA+EAKE G+ ++
Sbjct: 322 LKAKEHFRKDKDYVVVDGEVLIVDEHTGRILAGRRYNEGLHQAIEAKEAEEGTEAGVTVR 381
Query: 248 ADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQ 307
++ +A IT Q+ F+LY KL+GMTGTA TE EF +++Q+ V+ +P+N P IR D P Q
Sbjct: 382 NENQTLATITLQNFFRLYEKLAGMTGTAMTEAAEFHQIYQLNVVPIPSNRPMIRRDDPDQ 441
Query: 308 SFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYA 367
+ T K+ ++ G+P+LVG+TSVE SE LS LL++QGI H VLNA K
Sbjct: 442 IYRTEEAKYAAILADIAERHETGQPILVGTTSVEKSELLSGLLRKQGIRHEVLNA--KNH 499
Query: 368 AREAETVAQAGRKYAITISTNMAGRGTDIILGGNPKMLA 406
REA+ VAQAGR+ A+T++TNMAGRGTDI+LGGNP+ +A
Sbjct: 500 QREAQIVAQAGRRGAVTVATNMAGRGTDIMLGGNPEAMA 538
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 167/358 (46%), Gaps = 65/358 (18%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+VL + E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG++RF +SL
Sbjct: 553 AVLDRVGRAAAAEHEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGASRFYLSLG 612
Query: 575 DEMFQKFSFDTSWAVDLISRITN-DEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEF 633
D++ + F + V+ + + N +D+PIE + R + Q E+ +F RK +++F
Sbjct: 613 DDLMRLFR---AQVVERVMSMANVPDDVPIENKMVTRAIASAQSQLEQQHFESRKDVLKF 669
Query: 634 DEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
DEVL QR +Y R+ +L G E +Q+ +M ++ I P W L++L
Sbjct: 670 DEVLNRQRTLIYAERRRVLAG--EDLREQVRHFMDDTIEAYIRQETGE-GFPEEWDLERL 726
Query: 694 LKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRK 753
F + GI+ + L S+ P+L D+
Sbjct: 727 WGAFRQL-------YPVGITIEDLEDSVGGRPDLTVDDL--------------------- 758
Query: 754 SSSLKRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERA 813
+A ++D+ + RY +E+ ++++ER
Sbjct: 759 -------VAAVTEDV--HDRY---------------------ARREAELGADALRDLERL 788
Query: 814 VLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 871
V++ LD WR+HL M+ L + +R R P+ EY+ +G F +M A + +V
Sbjct: 789 VVLSVLDRKWREHLYEMDYLRDGIGLRWTLGREPIVEYEREGFDMFGAMTEAIKEESV 846
>gi|15677388|ref|NP_274543.1| preprotein translocase subunit SecA [Neisseria meningitidis MC58]
gi|385852859|ref|YP_005899373.1| Preprotein translocase subunit SecA [Neisseria meningitidis H44/76]
gi|416195946|ref|ZP_11617952.1| preprotein translocase, SecA subunit [Neisseria meningitidis CU385]
gi|427826101|ref|ZP_18993162.1| preprotein translocase, SecA subunit [Neisseria meningitidis
H44/76]
gi|433465518|ref|ZP_20422997.1| preprotein translocase, SecA subunit [Neisseria meningitidis NM422]
gi|433487871|ref|ZP_20445040.1| preprotein translocase, SecA subunit [Neisseria meningitidis
M13255]
gi|433490905|ref|ZP_20448024.1| preprotein translocase, SecA subunit [Neisseria meningitidis NM418]
gi|433505314|ref|ZP_20462252.1| preprotein translocase, SecA subunit [Neisseria meningitidis 9506]
gi|433507530|ref|ZP_20464435.1| preprotein translocase, SecA subunit [Neisseria meningitidis 9757]
gi|81784412|sp|Q9JYK8.1|SECA_NEIMB RecName: Full=Protein translocase subunit SecA
gi|7226781|gb|AAF41891.1| preprotein translocase SecA subunit [Neisseria meningitidis MC58]
gi|316985998|gb|EFV64935.1| preprotein translocase, SecA subunit [Neisseria meningitidis
H44/76]
gi|325140676|gb|EGC63192.1| preprotein translocase, SecA subunit [Neisseria meningitidis CU385]
gi|325199863|gb|ADY95318.1| preprotein translocase, SecA subunit [Neisseria meningitidis
H44/76]
gi|432202173|gb|ELK58238.1| preprotein translocase, SecA subunit [Neisseria meningitidis NM422]
gi|432224902|gb|ELK80664.1| preprotein translocase, SecA subunit [Neisseria meningitidis
M13255]
gi|432226671|gb|ELK82397.1| preprotein translocase, SecA subunit [Neisseria meningitidis NM418]
gi|432240547|gb|ELK96082.1| preprotein translocase, SecA subunit [Neisseria meningitidis 9757]
gi|432240606|gb|ELK96140.1| preprotein translocase, SecA subunit [Neisseria meningitidis 9506]
Length = 916
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/452 (46%), Positives = 279/452 (61%), Gaps = 42/452 (9%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ+IGG VLHDG IAEM+T VVTVNDYLA RDA
Sbjct: 81 MRHFDVQLIGGMVLHDGKIAEMRTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
ME ++ FLGL+VG+I M P +R++ Y DITY N+E GFDYLRDN+ + V
Sbjct: 141 GIMEPLYNFLGLTVGVIISDMQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------H 151
R +FA+VDEVDS+LIDE R PL+ISG+A ++ Y + V LV+
Sbjct: 201 R---ELNFAVVDEVDSILIDEARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGD 257
Query: 152 YTVELKNNSVELTEEGIALAEMALETNDLWDEND--------PWARFVMNALKAKEFYRR 203
Y V+ K + V L+E G AE L L END +M AL+A + +
Sbjct: 258 YWVDEKAHQVILSEAGHEHAEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHK 317
Query: 204 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 263
D Y++++G+ +I++E TGR+ RRWSEG+HQAVEAKEG++I+ ++ +A IT+Q+ F+
Sbjct: 318 DQHYVIQDGEIVIVDEFTGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFR 377
Query: 264 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 323
LY KLSGMTGTA TE EF ++ + + +PTN P R D Q F +A K+E +++
Sbjct: 378 LYTKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDI 437
Query: 324 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 383
E + G+PVLVG+TS+ENSE +S LL Q G+PHNVLNA K REA VAQAG+ AI
Sbjct: 438 EECHKRGQPVLVGTTSIENSELVSKLLTQAGLPHNVLNA--KEHEREALIVAQAGKVGAI 495
Query: 384 TISTNMAGRGTDIILGGNPKMLAKKIIEDRLL 415
T++TNMAGRGTDI+LGGN K I D L
Sbjct: 496 TVATNMAGRGTDIVLGGNLKHQTDAIRADETL 527
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 154/343 (44%), Gaps = 85/343 (24%)
Query: 527 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTS 586
E +V GGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S +D + + F+ D +
Sbjct: 546 EHDKVMEAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRA 605
Query: 587 WAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 646
A+ ++R+ + + IE + + RQ+ G Q E F +RK ++E+D+V QRK +Y
Sbjct: 606 AAI--LNRLAPERGVAIEHNLLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYS 663
Query: 647 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAGKILD 706
R ILT S+ I MQ + +++ VD Y D + +++
Sbjct: 664 QRNEILT------SKDISDLMQEIRSDVVSDLVDT-----YMPPDSMEEQW--------- 703
Query: 707 DLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSLKRWL----A 762
D+P N R ++ WL A
Sbjct: 704 --------------------------------DIPTLENRLAAEFRLHEDIQSWLKADNA 731
Query: 763 ICSDDLTK------NGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLV 816
I D+ + Y A T L+ K M + ER V++
Sbjct: 732 IDGQDIKERLIERIENEYAAKTELVGKQA---------------------MADFERNVML 770
Query: 817 KTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFF 859
+ +D WR+HL M+ L +++RS+ +NP +EYK + F
Sbjct: 771 QVIDNQWREHLAAMDYLRQGIHLRSYAQKNPKQEYKREAFTMF 813
>gi|398785443|ref|ZP_10548447.1| preprotein translocase subunit SecA [Streptomyces auratus AGR0001]
gi|396994423|gb|EJJ05460.1| preprotein translocase subunit SecA [Streptomyces auratus AGR0001]
Length = 941
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/442 (45%), Positives = 285/442 (64%), Gaps = 41/442 (9%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
R +DVQ++GGA LH G +AEMKT ++TVNDYLA+RD+E
Sbjct: 80 RPYDVQLMGGAALHMGYVAEMKTGEGKTLVGTLPTYLNALSGKGVHLITVNDYLAERDSE 139
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
M RVH+FLGL+VG I M P +RR Y CDITY N+E GFDYLRDN+A + ++LV R
Sbjct: 140 MMGRVHKFLGLTVGCILADMTPAQRREQYNCDITYGTNNEFGFDYLRDNMAWSQDELVQR 199
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL-------- 150
+FA+VDEVDS+L+DE R PL+ISG A Y AK+ + L +G
Sbjct: 200 G---HNFAVVDEVDSILVDEARTPLIISGPADSATKWYGDFAKLVQRLKRGEAANPQRGI 256
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDV 205
Y V+ K +V + E G++ E L ++L++ N P ++ NA+KAKE ++ D
Sbjct: 257 EETGDYDVDEKKRTVGIHESGVSKVEDWLGIDNLYESVNTPLVGYLNNAIKAKELFKNDK 316
Query: 206 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 265
Y+V +G+ +I++E TGR+ RR++EG+HQA+EAKEG++I+ ++ +A IT Q+ F+LY
Sbjct: 317 DYVVIDGEVMIVDEHTGRILAGRRYNEGMHQAIEAKEGVEIKDENQTLATITLQNFFRLY 376
Query: 266 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 325
KLSGMTGTA TE EF +++++ V+ +PTN P +R+D + T K++ +++
Sbjct: 377 DKLSGMTGTAMTEAAEFHQIYKLGVVPIPTNRPMVRMDQADLIYRTEPAKFDAVVEDIVE 436
Query: 326 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 385
G+P+LVG+TSVE SEYLS L ++G+PH VLNA K REA +AQAGRK A+T+
Sbjct: 437 KHGKGQPILVGTTSVEKSEYLSQQLNKRGVPHEVLNA--KQHDREAPIIAQAGRKGAVTV 494
Query: 386 STNMAGRGTDIILGGNPKMLAK 407
+TNMAGRGTDI LGGNP LA+
Sbjct: 495 ATNMAGRGTDIKLGGNPDDLAE 516
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 7/184 (3%)
Query: 515 SVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQ 574
+ L+ E E EVK LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 539 AALERAEAAVKAEFEEVKELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLG 598
Query: 575 DEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFD 634
D++ + F V ++ + + D+PIE + R + Q E+ F RK+++++D
Sbjct: 599 DDLMRLFKAQMVERVMAMANVPD--DVPIENKMVTRAIASAQSQVEQQNFETRKNVLKYD 656
Query: 635 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFG-NVDPLKHPRYWSLDKL 693
EVL QR+ +Y R+ +L G E QI +M +D I V+ W LD+L
Sbjct: 657 EVLNRQREVIYGERRRVLEG--EDLQDQIKHFMDDTIDAYIQAETVEGFAEE--WDLDRL 712
Query: 694 LKEF 697
F
Sbjct: 713 WGAF 716
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 866
M+E+ER V++ LD WR+HL M+ L + +R+ ++PL EY+ +G F +M+
Sbjct: 768 MRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFTAMMEGI 827
Query: 867 RRLTV 871
+ +V
Sbjct: 828 KEESV 832
>gi|399910305|ref|ZP_10778619.1| preprotein translocase subunit SecA [Halomonas sp. KM-1]
Length = 912
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/451 (47%), Positives = 278/451 (61%), Gaps = 47/451 (10%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MRHFDVQ++GG LH G IAEMKT VVTVNDYLA+RDA
Sbjct: 81 MRHFDVQMVGGMTLHRGRIAEMKTGEGKTLVATLAVYLNALPGEGVHVVTVNDYLARRDA 140
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
EWM ++ FLGLSVG+I G EE+R+ Y CDITY N+E GFDYLRDN+A + E V
Sbjct: 141 EWMRPLYEFLGLSVGIIFAGQTSEEKRAAYACDITYGTNNEYGFDYLRDNMAFSLEDKVQ 200
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------- 150
R FAI+DEVDS+LIDE R PL+ISG ++ Y V ++A L +G
Sbjct: 201 RG---LSFAIIDEVDSILIDEARTPLIISGAVDENTELYKVVDRLAAQLERGEVSEDADA 257
Query: 151 ----HYTVELKNNSVELTEEGIALAEMALETNDLWDENDP-WARFVMN-------ALKAK 198
+ +E K VE+TE G E + L +D +A +N AL+A+
Sbjct: 258 PIEGDFVLEEKQKQVEITEAGHNKVEELMRAEGLLGADDSLYAAQNLNLLHHMHSALRAR 317
Query: 199 EFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITY 258
Y RDV YIV N + +I++E TGR RRWSEG+HQAVEAKEG+ +Q +S +A T+
Sbjct: 318 HLYHRDVDYIVANNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVPVQRESQTLASTTF 377
Query: 259 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEY 318
Q+ F+LY KL+GMTGTA TE EF +++ + VI +PTN P +R DL + T K+E
Sbjct: 378 QNYFRLYDKLAGMTGTADTEAFEFRQIYGLDVIVIPTNRPLVRRDLNDLVYLTGEEKYEA 437
Query: 319 ARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAG 378
+V++ GRPVLVG+ S+E SEYL+ L+KQ G+ NVLNA+ + EAE +AQAG
Sbjct: 438 IINDVKAETEAGRPVLVGTASIETSEYLAGLMKQAGLNFNVLNAKQHQS--EAEIIAQAG 495
Query: 379 RKYAITISTNMAGRGTDIILGGNPKMLAKKI 409
R AITI+TNMAGRGTDI+LGGN + A K+
Sbjct: 496 RPGAITIATNMAGRGTDIVLGGNWEAEAAKL 526
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Query: 535 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 594
GGLHVIG+ HESRRIDNQLRGRAGRQGDPGSTRF +S++D + + F D ++
Sbjct: 552 GGLHVIGSERHESRRIDNQLRGRAGRQGDPGSTRFFLSMEDSLMRLFGSDRVQR--MMKA 609
Query: 595 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 654
+ + IE + + Q E F IRK L+E+D+V QR+ +Y+ R IL
Sbjct: 610 LGLERGEAIEHKMVTNAVERAQKKVESRNFDIRKQLLEYDDVANDQRRVIYEQRNEIL-- 667
Query: 655 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 693
A E SQ + V+D + V P P W L L
Sbjct: 668 AAEDVSQNVLGIRDEVLDLAVSEFVPPQSLPEQWDLAGL 706
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 37/58 (63%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 864
++ E+ ++++ LD W++HL +M+ L +++R + +NP +EYK + F ++L+
Sbjct: 759 IRRFEKQIMLQVLDTRWKEHLQSMDHLRRGIHLRGYAQKNPKQEYKRESFELFQTLLT 816
>gi|403068169|ref|ZP_10909501.1| preprotein translocase subunit SecA [Oceanobacillus sp. Ndiop]
Length = 837
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 270/430 (62%), Gaps = 29/430 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR F VQI+G LH+G+IAEMKT ++TVN+YLA RDA
Sbjct: 80 MRPFQVQIMGAIALHEGNIAEMKTGEGKTLASTMPAYLNALSGNGVHIITVNEYLADRDA 139
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
+ M +++ FLG++VGL G+ EE+R Y CDITY N+E GFDYLRDN+ Q+V
Sbjct: 140 KEMGKLYDFLGMTVGLNGNGLSKEEKREAYNCDITYGTNNEFGFDYLRDNMVLYKNQMVQ 199
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P +FAI+DEVDS+LIDE R PL+ISG A K + Y A L + YT + K
Sbjct: 200 R---PLNFAIIDEVDSILIDEARTPLIISGSAKKSASLYQQADSFVATLNKQTDYTYDEK 256
Query: 158 NNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
V+LTEEGI AE +L+D N+ + ALKA RD Y+V G+ +I
Sbjct: 257 TKGVQLTEEGINKAERYFSIENLFDLNNVSLTHHINQALKAHASMHRDDDYMVEEGEVII 316
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
I++ TGR + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 317 IDQFTGRKMKGRRYSDGLHQAIEAKEGLQIQNESMTLASITFQNFFRMYNKLSGMTGTAK 376
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P R D P + + GK+ + ++ G+PVLVG
Sbjct: 377 TEEEEFRNIYNMYVIAIPTNKPITRDDRPDLIYKSMEGKFRAVVENIKERHAAGQPVLVG 436
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ +VE SE +S LLK+ G+ H VLNA+ Y REAE + AG+K A+TI+TNMAGRGTDI
Sbjct: 437 TVAVETSELISKLLKKAGVRHEVLNAKNHY--REAEIIENAGQKNAVTIATNMAGRGTDI 494
Query: 397 ILGGNPKMLA 406
LG K L
Sbjct: 495 KLGEGVKELG 504
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G VK LGGL V+GT HESRRIDNQLRGR+GRQGDPG T+F +S++DE+ ++F D
Sbjct: 497 GEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNLK 556
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D++ PIE + R + Q E F RK+++ +D+VL QR+ +Y
Sbjct: 557 A--MMERLGMDDNQPIESKMVSRAVESAQKRVEGNNFDARKTVLSYDDVLREQREIIYKQ 614
Query: 648 RQSIL 652
R ++
Sbjct: 615 RFEVI 619
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 40/58 (68%)
Query: 808 KEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
+E E+ +L++T+D W DH+ M++L +++R++G +PL EY+++G F M+++
Sbjct: 710 REFEKVILLRTVDSKWMDHIDQMDQLRQGIHLRAYGQNDPLREYQMEGYAMFEEMVAS 767
>gi|30265213|ref|NP_847590.1| preprotein translocase subunit SecA [Bacillus anthracis str. Ames]
gi|47530734|ref|YP_022083.1| preprotein translocase subunit SecA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188024|ref|YP_031277.1| preprotein translocase subunit SecA [Bacillus anthracis str.
Sterne]
gi|65317160|ref|ZP_00390119.1| COG0653: Preprotein translocase subunit SecA (ATPase, RNA helicase)
[Bacillus anthracis str. A2012]
gi|165870035|ref|ZP_02214692.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0488]
gi|167635257|ref|ZP_02393572.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0442]
gi|167640465|ref|ZP_02398728.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0193]
gi|170687975|ref|ZP_02879188.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0465]
gi|170707786|ref|ZP_02898237.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0389]
gi|177652963|ref|ZP_02935290.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0174]
gi|190567744|ref|ZP_03020656.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
Tsiankovskii-I]
gi|227817947|ref|YP_002817956.1| preprotein translocase subunit SecA [Bacillus anthracis str. CDC
684]
gi|229603119|ref|YP_002869407.1| preprotein translocase subunit SecA [Bacillus anthracis str. A0248]
gi|254686388|ref|ZP_05150247.1| preprotein translocase subunit SecA [Bacillus anthracis str.
CNEVA-9066]
gi|254735593|ref|ZP_05193300.1| preprotein translocase subunit SecA [Bacillus anthracis str.
Western North America USA6153]
gi|254744319|ref|ZP_05201999.1| preprotein translocase subunit SecA [Bacillus anthracis str. Kruger
B]
gi|254755617|ref|ZP_05207650.1| preprotein translocase subunit SecA [Bacillus anthracis str.
Vollum]
gi|254757072|ref|ZP_05209100.1| preprotein translocase subunit SecA [Bacillus anthracis str.
Australia 94]
gi|386739042|ref|YP_006212223.1| Protein translocase subunit secA 1 [Bacillus anthracis str. H9401]
gi|421508938|ref|ZP_15955848.1| preprotein translocase subunit SecA [Bacillus anthracis str. UR-1]
gi|421640939|ref|ZP_16081511.1| preprotein translocase subunit SecA [Bacillus anthracis str. BF1]
gi|81837850|sp|Q81X26.1|SECA1_BACAN RecName: Full=Protein translocase subunit SecA 1
gi|30259890|gb|AAP29076.1| preprotein translocase, SecA subunit [Bacillus anthracis str. Ames]
gi|47505882|gb|AAT34558.1| preprotein translocase, SecA subunit [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181951|gb|AAT57327.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
Sterne]
gi|164714358|gb|EDR19878.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0488]
gi|167511508|gb|EDR86891.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0193]
gi|167529300|gb|EDR92052.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0442]
gi|170127343|gb|EDS96219.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0389]
gi|170668084|gb|EDT18834.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0465]
gi|172081738|gb|EDT66808.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0174]
gi|190561160|gb|EDV15133.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
Tsiankovskii-I]
gi|227004123|gb|ACP13866.1| preprotein translocase, SecA subunit [Bacillus anthracis str. CDC
684]
gi|229267527|gb|ACQ49164.1| preprotein translocase, SecA subunit [Bacillus anthracis str.
A0248]
gi|384388894|gb|AFH86555.1| Protein translocase subunit secA 1 [Bacillus anthracis str. H9401]
gi|401821114|gb|EJT20274.1| preprotein translocase subunit SecA [Bacillus anthracis str. UR-1]
gi|403391933|gb|EJY89197.1| preprotein translocase subunit SecA [Bacillus anthracis str. BF1]
Length = 835
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/434 (45%), Positives = 282/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQ++GG LH+G+I+EMKT VVTVN+YLAQRDA
Sbjct: 79 MRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLAQRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M ++H FLGL+VG+ M EE++ Y DITY+ N+ELGFDYLRDN+ EQ V
Sbjct: 139 NEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYLRDNMVLYKEQCVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A L Y+ ++K
Sbjct: 199 R---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I
Sbjct: 256 TKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 316 VDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P IR D F + +GK+ +++ + + G+PVLVG
Sbjct: 376 TEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMKGKFNAVVEDIVNRHKQGQPVLVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE +S +L ++G+ HN+LNA K AREA+ +A+AG K A+TI+TNMAGRGTDI
Sbjct: 436 TVAIETSELISKMLTRKGVRHNILNA--KNHAREADIIAEAGMKGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKII 410
LG + K + +I
Sbjct: 494 KLGDDIKNIGLAVI 507
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G ++K +G L VIGT HESRRIDNQLRGRAGRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GDDIKNIG-LAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PIE + R + Q E + RK L+++D+VL QR+ +Y
Sbjct: 555 A--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQ 612
Query: 648 RQSILTGAN 656
RQ ++ N
Sbjct: 613 RQEVMESEN 621
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ V+ + +D W +H+ M+ L +++R++G +PL EY+++G F SM+++
Sbjct: 706 MREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFAMFESMIAS 764
>gi|288959404|ref|YP_003449745.1| preprotein translocase subunit SecA [Azospirillum sp. B510]
gi|288911712|dbj|BAI73201.1| preprotein translocase SecA subunit [Azospirillum sp. B510]
Length = 911
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 279/433 (64%), Gaps = 36/433 (8%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDAE 38
RHFDVQ++GG VLH G IAEM+T VVTVNDYLA RD+
Sbjct: 82 RHFDVQLMGGMVLHGGKIAEMRTGEGKTLVATLAVYLNALEGKGVHVVTVNDYLASRDSG 141
Query: 39 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 98
WM RV+ FLGL+ G I G+ +ERR+ Y DITY N+E GFDYLRDN+ E+LV R
Sbjct: 142 WMARVYGFLGLTTGCIVHGLDDDERRAAYAADITYGTNNEFGFDYLRDNMKFRLEELVQR 201
Query: 99 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 158
PF++AIVDEVDS+LIDE R PL+ISG ++ Y ++ LLV Y + K+
Sbjct: 202 ---PFNYAIVDEVDSILIDEARTPLIISGPSTDSSEMYVQVDRLIPLLV-AEDYEKDEKH 257
Query: 159 NSVELTEEGIALAEMAL------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRN 211
+V TE G E L ++ L+D +N AL+A ++RD YIV++
Sbjct: 258 RTVSFTEAGQEHMEQLLGQAGLLKSGGLYDIQNVALVHHAQQALRAHMLFQRDKDYIVKD 317
Query: 212 GKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGM 271
K +II+E TGR+ E RR+SEG+HQA+EAKE + IQ ++ +A IT+Q+ F++YPKL+GM
Sbjct: 318 DKVVIIDEFTGRMMEGRRFSEGLHQALEAKEKVTIQRENQTLASITFQNYFRIYPKLAGM 377
Query: 272 TGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGR 331
TGTA TE EF +++ + V+++PTNLP R+D + + TA K+ +E + G+
Sbjct: 378 TGTALTEAAEFGEIYGLEVVDMPTNLPVKRIDHDDEVYRTAAEKYHAMTDLIEDARKRGQ 437
Query: 332 PVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAG 391
PVLVG+TS+E SE LSDLL ++GIPHNVLNAR + +EA VAQAGR A+T++TNMAG
Sbjct: 438 PVLVGTTSIEKSELLSDLLNKRGIPHNVLNAR--HHEQEAYIVAQAGRAGAVTVATNMAG 495
Query: 392 RGTDIILGGNPKM 404
RGTDI LGGN +M
Sbjct: 496 RGTDIQLGGNLQM 508
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Query: 492 LQKLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRID 551
LQ I+ + A P GP + +K E + VK GGL+VIGT HESRRID
Sbjct: 506 LQMRIEVELADLPEGPERD----ARIKRIEAEIAEARETVKAAGGLYVIGTERHESRRID 561
Query: 552 NQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQ 611
NQLRGR+GRQGDPG+++F +SL+D++ + F + ++ R+ E I I +
Sbjct: 562 NQLRGRSGRQGDPGTSKFFLSLEDDLMRIFG--SERMDSMLQRLGLKEGEAIIHPWINKA 619
Query: 612 LLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVV 671
L Q E ++F +RK+L++FD V+ QRK VY+ R ++ +E +++I + ++
Sbjct: 620 LEKAQQKVEAHHFEVRKNLLKFDNVMNDQRKVVYEQRHEVME--SEDIAEEIREMRHQII 677
Query: 672 DEIIFGNVDPLKHPRYWSLDKL 693
++ + + W +D L
Sbjct: 678 ANMVSTAIPANSYSEQWDIDGL 699
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 798 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCR 857
+E Y M+ VE+++L++ LD W+DHL+ ++ L +N+R++ ++PL EYK +
Sbjct: 742 KEEAYGAQTMRHVEKSILLQILDQEWKDHLLQLDHLRQGINLRAYAQKDPLNEYKREAFE 801
Query: 858 FFISMLSATRR--LTVESLVQYWSSPMESQELF 888
F SML A R T+ V+ +P ++ELF
Sbjct: 802 LFDSMLMALREQVTTILMHVEIRMAP-SAEELF 833
>gi|228942323|ref|ZP_04104862.1| Protein translocase subunit secA 1 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228975252|ref|ZP_04135810.1| Protein translocase subunit secA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981890|ref|ZP_04142185.1| Protein translocase subunit secA 1 [Bacillus thuringiensis Bt407]
gi|384189266|ref|YP_005575162.1| preprotein translocase subunit SecA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410677596|ref|YP_006929967.1| protein translocase subunit SecA [Bacillus thuringiensis Bt407]
gi|423386668|ref|ZP_17363923.1| protein translocase subunit secA [Bacillus cereus BAG1X1-2]
gi|423527005|ref|ZP_17503450.1| protein translocase subunit secA [Bacillus cereus HuB1-1]
gi|452201677|ref|YP_007481758.1| Protein export cytoplasm protein SecA ATPase RNA helicase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|228778002|gb|EEM26274.1| Protein translocase subunit secA 1 [Bacillus thuringiensis Bt407]
gi|228784531|gb|EEM32552.1| Protein translocase subunit secA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817367|gb|EEM63453.1| Protein translocase subunit secA 1 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326942975|gb|AEA18871.1| preprotein translocase subunit SecA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401632089|gb|EJS49879.1| protein translocase subunit secA [Bacillus cereus BAG1X1-2]
gi|402454168|gb|EJV85961.1| protein translocase subunit secA [Bacillus cereus HuB1-1]
gi|409176725|gb|AFV21030.1| protein translocase subunit SecA [Bacillus thuringiensis Bt407]
gi|452107070|gb|AGG04010.1| Protein export cytoplasm protein SecA ATPase RNA helicase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 835
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/434 (45%), Positives = 281/434 (64%), Gaps = 29/434 (6%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKT-----------------------VVTVNDYLAQRDA 37
MR + VQ++GG LH+G+I+EMKT VVTVN+YLAQRDA
Sbjct: 79 MRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLAQRDA 138
Query: 38 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 97
M ++H FLGL+VG+ M EE++ Y DITY+ N+ELGFDYLRDN+ EQ V
Sbjct: 139 NEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYLRDNMVLYKEQCVQ 198
Query: 98 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 157
R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A L Y+ ++K
Sbjct: 199 R---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKEYSFDVK 255
Query: 158 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 216
+V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I
Sbjct: 256 TKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVI 315
Query: 217 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 276
+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 316 VDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAK 375
Query: 277 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 336
TEE+EF ++ M VI +PTN P IR D F + GK+ +++ + + G+P+LVG
Sbjct: 376 TEEEEFRSIYNMNVIVIPTNKPIIRDDRADLIFKSMEGKFNAVVEDIVNRHKQGQPILVG 435
Query: 337 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 396
+ ++E SE +S +L ++G+ HN+LNA K AREA+ +A+AG K A+TI+TNMAGRGTDI
Sbjct: 436 TVAIETSELISKMLTRKGVRHNILNA--KNHAREADIIAEAGMKGAVTIATNMAGRGTDI 493
Query: 397 ILGGNPKMLAKKII 410
LG + K+ +I
Sbjct: 494 KLGDDVKIFGLAVI 507
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Query: 528 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 587
G +VK + GL VIGT HESRRIDNQLRGRAGRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GDDVK-IFGLAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMK 554
Query: 588 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 647
A ++ R+ D+ PIE + R + Q E + RK L+++D+VL QR+ +Y
Sbjct: 555 A--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQ 612
Query: 648 RQSILTGAN 656
RQ ++ N
Sbjct: 613 RQEVMESEN 621
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%)
Query: 807 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 865
M+E E+ V+ + +D W +H+ M+ L +++R++G +PL EY+++G F SM+++
Sbjct: 706 MREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFAMFESMVAS 764
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,231,776,133
Number of Sequences: 23463169
Number of extensions: 544637508
Number of successful extensions: 1499838
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5474
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1457080
Number of HSP's gapped (non-prelim): 16071
length of query: 890
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 738
effective length of database: 8,792,793,679
effective search space: 6489081735102
effective search space used: 6489081735102
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)