Query         002713
Match_columns 889
No_of_seqs    562 out of 4452
Neff          7.8 
Searched_HMMs 29240
Date          Tue Mar 26 21:21:46 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m2/002713.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_95-98//hhsearch_pdb/002713hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3e7a_A PP-1A, serine/threonine   1.0       1       1  571.8  32.0  291  535-841     8-298 (299)
  2 1fjm_A Protein serine/threonin   1.0       1       1  553.1  32.0  318  535-878     9-327 (330)
  3 3icf_A PPT, serine/threonine-p   1.0       1       1  547.6  30.7  291  531-845    13-322 (335)
  4 3ll8_A Serine/threonine-protei   1.0       1       1  547.4  31.9  288  535-845    30-328 (357)
  5 3h63_A Serine/threonine-protei   1.0       1       1  543.3  32.1  292  530-845    11-308 (315)
  6 1aui_A Calcineurin, serine/thr   1.0       1       1  539.1  32.5  288  535-845    43-341 (521)
  7 2ie4_C PP2A-alpha;, serine/thr   1.0       1       1  522.9  31.4  287  534-844     9-295 (309)
  8 1wao_1 Serine/threonine protei   1.0       1       1  504.4  35.1  291  531-845   165-461 (477)
  9 2zwa_A Leucine carboxyl methyl   1.0       1       1  314.6  30.2  303   18-365   377-693 (695)
 10 1zgk_A Kelch-like ECH-associat   1.0       1       1  310.2  33.1  276   24-366     9-287 (308)

No 1  
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=1.00  E-value=1  Score=571.80  Aligned_cols=291  Identities=47%  Similarity=0.880  Sum_probs=276.2

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713          535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  614 (889)
Q Consensus       535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~  614 (889)
                      ++.+|++|++.+.+++..  ...++++++..||++|+++|.+||+++++++|++||||||||+.+|+++|+..++++.+ 
T Consensus         8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~-   84 (299)
T 3e7a_A            8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES-   84 (299)
T ss_dssp             HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred             HHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC-
T ss_conf             999999997322568875--56789999999999999999749873602897799951889999999999980999976-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713          615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  694 (889)
Q Consensus       615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  694 (889)
                           +|||||||||||++|+||+.+|+++|++||+++++||||||.+.++..|||++||..+|+    ..+|+.+.++|
T Consensus        85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f  155 (299)
T 3e7a_A           85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF  155 (299)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHH----HHHHHHHHHHH
T ss_conf             -----189688614778882999999999875479828998268501110123331178888755----89999999998


Q ss_pred             CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf             77752899908088733887788769777530248832599981122011389999887879654899991278299999
Q 002713          695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV  774 (889)
Q Consensus       695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~  774 (889)
                      ++||+++++++++|||||||+|.+.++++|+.+.||.+++..+ +++|||||||..  ...+|.+|+||.| +.||++++
T Consensus       156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~  231 (299)
T 3e7a_A          156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV  231 (299)
T ss_dssp             TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred             HHCCCEEEECCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCH-HHHHHHCCCCCC--CCCCCCCCCCCCC-EEECHHHH
T ss_conf             6298338987829998576686557899997364887688610-356643378644--5567565889860-21388999


Q ss_pred             HHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf             9999865970899800112466079549918999504566799897299999938721996992269
Q 002713          775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPL  841 (889)
Q Consensus       775 ~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~  841 (889)
                      ++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+++++|+|.
T Consensus       232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~  298 (299)
T 3e7a_A          232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  298 (299)
T ss_dssp             HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHHHHCCCEEEEECCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf             9999987982999857020046599069949999897542789885179999989984889995689


No 2  
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=1.00  E-value=1  Score=553.07  Aligned_cols=318  Identities=45%  Similarity=0.822  Sum_probs=288.6

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713          535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  614 (889)
Q Consensus       535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~  614 (889)
                      ++++|++|++.+.+++.  ....|+++++..||++++++|.+||+++++..|++||||||||+++|+++|+..++++.+ 
T Consensus         9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~-   85 (330)
T 1fjm_A            9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES-   85 (330)
T ss_dssp             HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred             HHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCC-
T ss_conf             99999999725356776--467789999999999999999749986852476588437878899999999985899866-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713          615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  694 (889)
Q Consensus       615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  694 (889)
                           +|||||||||||++|+||+.+|++||++||.++++||||||.+.++..|||.+||..+|+    ..+|+.+.++|
T Consensus        86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f  156 (330)
T 1fjm_A           86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF  156 (330)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHH
T ss_conf             -----289689867888876999999998655258855786077357665433212366654313----99999999999


Q ss_pred             CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf             77752899908088733887788769777530248832599981122011389999887879654899991278299999
Q 002713          695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV  774 (889)
Q Consensus       695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~  774 (889)
                      ++||++++++++++|||||++|.+.++++|+.+.||.+.+..+ +++|+|||||..  ...+|.+|.||.+ +.||++++
T Consensus       157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~  232 (330)
T 1fjm_A          157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV  232 (330)
T ss_dssp             TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred             HHCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC-HHHHHHHCCCCC--CCCCCCCCCCCCC-EEECHHHH
T ss_conf             8298559985829998067785547788876640676576522-477887528765--5578675568970-33373779


Q ss_pred             HHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             99998659708998001124660795499189995045667998972999999387219969922699999999999621
Q 002713          775 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPER  854 (889)
Q Consensus       775 ~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  854 (889)
                      .+||+++++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.++|++|+|.+... .       
T Consensus       233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~~-~-------  304 (330)
T 1fjm_A          233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNK-G-------  304 (330)
T ss_dssp             HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred             HHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC-C-------
T ss_conf             99998589864766664225875881699499981884103377876799998799857689962786443-3-------


Q ss_pred             CCHHHHHHHH-HCCCCCCCCCCCCC
Q ss_conf             1103588885-20799999999999
Q 002713          855 VIDDMWMQEL-NIQRPPTPTRGRPQ  878 (889)
Q Consensus       855 ~~~~~~~~~~-~~~~~~~~~~~~~~  878 (889)
                        ...|+.+. ...||+||||++++
T Consensus       305 --~~~~~~~~~~~~~~~~~~~~~~~  327 (330)
T 1fjm_A          305 --KYGQFSGLNPGGRPITPPRNSAK  327 (330)
T ss_dssp             -------------------------
T ss_pred             --CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             --32221100013589989987411


No 3  
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=1.00  E-value=1  Score=547.57  Aligned_cols=291  Identities=35%  Similarity=0.646  Sum_probs=270.7

Q ss_pred             CCHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC------EEEEECCCCCHHHHHHH
Q ss_conf             704799999-99949998889988432259999999999999998209954752598------58980678998999999
Q 002713          531 PQGLHKKII-STLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP------VKVFGDLHGQFGDLMRL  603 (889)
Q Consensus       531 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~------i~viGDiHG~~~~L~~~  603 (889)
                      +..+++++| +.+.+.+          .|+++++..||.+++++|.+||+++++..|      ++||||||||+++|+++
T Consensus        13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l   82 (335)
T 3icf_A           13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL   82 (335)
T ss_dssp             CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf             99999999999998289----------99999999999999999984998688437766672489980577799999999


Q ss_pred             HHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             99809999999963014999524368999819999999997660899489952787300012102894899988278875
Q 002713          604 FDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG  683 (889)
Q Consensus       604 l~~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~  683 (889)
                      |+..++++...     +|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||.+||..+|.    
T Consensus        83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~----  153 (335)
T 3icf_A           83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS----  153 (335)
T ss_dssp             HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred             HHHCCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHCC----
T ss_conf             99708999896-----899958833777571999999999744178827996575365332110242067675404----


Q ss_pred             HHHHHHHHHHCCCCCEEEEECCEEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             0234455121277752899908088733887-788769777530248832599981122011389999887879654899
Q 002713          684 IWAWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNAR  762 (889)
Q Consensus       684 ~~~~~~~~~~f~~lP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~r  762 (889)
                      ..+|+.+.++|++||+++++++++||||||| +|.+.++++|+.+.|+.+.+..+ +++|||||||..   ..+|.+|+|
T Consensus       154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R  229 (335)
T 3icf_A          154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR  229 (335)
T ss_dssp             HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred             HHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC-CHHHHHCCCCCC---CCCCCCCCC
T ss_conf             8999999999863510279768089964786887657789997576654431123-212210368877---687563778


Q ss_pred             CCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECC-----------CC
Q ss_conf             9912782999999999865970899800112466079549918999504566799897299999938-----------72
Q 002713          763 GPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGR-----------GL  831 (889)
Q Consensus       763 g~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~-----------~~  831 (889)
                      |.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++           ++
T Consensus       230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~  308 (335)
T 3icf_A          230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ  308 (335)
T ss_dssp             C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred             CCC-EEECHHHHHHHHHHCCCEEEEECCCEECCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf             875-0248899999999889848997474004738996699389997786437788972699998065454333455667


Q ss_pred             EEEEEEECCCCCCC
Q ss_conf             19969922699999
Q 002713          832 VVVPKLIHPLPPPL  845 (889)
Q Consensus       832 ~~~~~~~~~~~~~~  845 (889)
                      .+.+++|.+.|...
T Consensus       309 ~~~~~~f~~~~~~~  322 (335)
T 3icf_A          309 NLIIETFEAVEHPD  322 (335)
T ss_dssp             TEEEEEECCCCCCS
T ss_pred             CEEEEEEECCCCCC
T ss_conf             52389974589999


No 4  
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=1.00  E-value=1  Score=547.36  Aligned_cols=288  Identities=36%  Similarity=0.624  Sum_probs=266.6

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713          535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  614 (889)
Q Consensus       535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~  614 (889)
                      ++.+++++.+.+          .++++++..||++++++|.+||+++++++|++||||||||+.+|+++|+..+.++.+ 
T Consensus        30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~-   98 (357)
T 3ll8_A           30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT-   98 (357)
T ss_dssp             HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred             HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCC-
T ss_conf             999999998579----------899999999999999999849986876364005316888899999999962899986-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713          615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  694 (889)
Q Consensus       615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  694 (889)
                           +|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||++||..+|+    ..+|+.+.++|
T Consensus        99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f  169 (357)
T 3ll8_A           99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF  169 (357)
T ss_dssp             -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCHHHHHHCCC----HHHHHHHHHHH
T ss_conf             -----799888705788675999999998665469848998276565432112672356553133----36899999999


Q ss_pred             CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCC----CCCCCC-CCCCCCEEEE
Q ss_conf             77752899908088733887788769777530248832599981122011389999887----879654-8999912782
Q 002713          695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRP-NARGPGLVTF  769 (889)
Q Consensus       695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~----~~~~~~-n~rg~~~~~f  769 (889)
                      ++||+++++++++|||||||+|.+.++++|+.+.|+.+++..+ +++|||||||.....    ..+|.+ ++||+| +.|
T Consensus       170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F  247 (357)
T 3ll8_A          170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY  247 (357)
T ss_dssp             HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred             HHCCCCEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCC-CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-EEE
T ss_conf             7388205972528999267685547798875244665577667-16676605863224666655424457778872-388


Q ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC------EEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             9999999998659708998001124660795499------1899950456679989729999993872199699226999
Q 002713          770 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP  843 (889)
Q Consensus       770 g~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~  843 (889)
                      |++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.+++++ ..+++|.+.|-
T Consensus       248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h  326 (357)
T 3ll8_A          248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH  326 (357)
T ss_dssp             CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC-CEEEEECCCCC
T ss_conf             95899999998799599980313116048845886789985899979986589888537999998996-35999568899


Q ss_pred             CC
Q ss_conf             99
Q 002713          844 PL  845 (889)
Q Consensus       844 ~~  845 (889)
                      .+
T Consensus       327 p~  328 (357)
T 3ll8_A          327 PY  328 (357)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             88


No 5  
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=1.00  E-value=1  Score=543.33  Aligned_cols=292  Identities=32%  Similarity=0.583  Sum_probs=271.7

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC----EEEEECCCCCHHHHHHHHH
Q ss_conf             970479999999949998889988432259999999999999998209954752598----5898067899899999999
Q 002713          530 SPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFD  605 (889)
Q Consensus       530 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~L~~~l~  605 (889)
                      -...+++++|+.+.+.+          .|++.++..||.+++++|.+||++++++.|    ++||||||||+.+|+++|+
T Consensus        11 ~~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~   80 (315)
T 3h63_A           11 VTISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFE   80 (315)
T ss_dssp             CCHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             89999999999998079----------99999999999999999985998478724888427998058878999999999


Q ss_pred             HHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHH
Q ss_conf             80999999996301499952436899981999999999766089948995278730001210289489998827887502
Q 002713          606 EYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW  685 (889)
Q Consensus       606 ~~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~  685 (889)
                      ..++++...     .|||||||||||++|+||+.+|++||+++|+++++||||||.+.++..|||.+||..+|+    ..
T Consensus        81 ~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~  151 (315)
T 3h63_A           81 LNGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQ  151 (315)
T ss_dssp             HHCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HH
T ss_pred             HHCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH----HH
T ss_conf             747998887-----899968842778572999999998413269847998367511000101330078898740----67


Q ss_pred             HHHHHHHHCCCCCEEEEECCEEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             34455121277752899908088733887-78876977753024883259998112201138999988787965489999
Q 002713          686 AWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGP  764 (889)
Q Consensus       686 ~~~~~~~~f~~lP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~  764 (889)
                      +|+.+.++|++||+++++++++||||||| +|.+.++++|+.+.|+.+.+..+ +++|||||||..   ..+|.+|+||.
T Consensus       152 l~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~  227 (315)
T 3h63_A          152 MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGV  227 (315)
T ss_dssp             HHHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSS
T ss_pred             HHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHEECCCCC---CCCCCCCCCCC
T ss_conf             89999999852983899869789967987876668899998474666543344-055403068987---78857489985


Q ss_pred             CEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEC-CCCEEEEEEECCCCC
Q ss_conf             1278299999999986597089980011246607954991899950456679989729999993-872199699226999
Q 002713          765 GLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG-RGLVVVPKLIHPLPP  843 (889)
Q Consensus       765 ~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~-~~~~~~~~~~~~~~~  843 (889)
                      | +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.++ +++...+++|.+.|.
T Consensus       228 g-~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~  306 (315)
T 3h63_A          228 S-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPH  306 (315)
T ss_dssp             S-EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCC
T ss_pred             E-EEECHHHHHHHHHHCCCCEEEEECEEECCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCC
T ss_conf             2-787889999999986991899826240388599359939999898653778886379999987987074699746899


Q ss_pred             CC
Q ss_conf             99
Q 002713          844 PL  845 (889)
Q Consensus       844 ~~  845 (889)
                      ..
T Consensus       307 ~~  308 (315)
T 3h63_A          307 PN  308 (315)
T ss_dssp             CS
T ss_pred             CC
T ss_conf             98


No 6  
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=1.00  E-value=1  Score=539.05  Aligned_cols=288  Identities=37%  Similarity=0.629  Sum_probs=266.8

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999982099547525985898067899899999999809999999
Q 002713          535 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  614 (889)
Q Consensus       535 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~~  614 (889)
                      ++.++++|.+.+          .|+++++..||++++++|.+||+++++..|++|||||||||++|+++|+..+.++.+ 
T Consensus        43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d-  111 (521)
T 1aui_A           43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT-  111 (521)
T ss_dssp             HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred             HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCC-
T ss_conf             999999997079----------899999999999999999868985764363023047877799999999960799765-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96301499952436899981999999999766089948995278730001210289489998827887502344551212
Q 002713          615 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  694 (889)
Q Consensus       615 ~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  694 (889)
                           +|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||.+||..+|+    ..+|+.+.++|
T Consensus       112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f  182 (521)
T 1aui_A          112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF  182 (521)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHH
T ss_conf             -----699717757888787999999999750178808996377508999877175378888640----58899999999


Q ss_pred             CCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCC----CCCCCCC-CCCCCEEEE
Q ss_conf             77752899908088733887788769777530248832599981122011389999887----8796548-999912782
Q 002713          695 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRPN-ARGPGLVTF  769 (889)
Q Consensus       695 ~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~----~~~~~~n-~rg~~~~~f  769 (889)
                      ++||+++++++++|||||||+|.+.++++|+.+.|+.+.+..+ +++|||||||.....    ..+|.+| .||++ +.|
T Consensus       183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F  260 (521)
T 1aui_A          183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY  260 (521)
T ss_dssp             TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred             HHCCCEEEECCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHEECCCCCCCCCCCCCCCEECCCCCCCC-CCC
T ss_conf             8588027964872687777675657777764225776787412-13431234752124655567640026677866-544


Q ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC------EEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             9999999998659708998001124660795499------1899950456679989729999993872199699226999
Q 002713          770 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP  843 (889)
Q Consensus       770 g~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~  843 (889)
                      |++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.++++ .+.+++|.+.+.
T Consensus       261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~  339 (521)
T 1aui_A          261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH  339 (521)
T ss_dssp             CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred             CHHHHHHHHHHCCCCEEEECCCHHCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECC-CCEEEEECCCCC
T ss_conf             8899999999869938997662020640541488678898289991886647788843899998089-634899558898


Q ss_pred             CC
Q ss_conf             99
Q 002713          844 PL  845 (889)
Q Consensus       844 ~~  845 (889)
                      .+
T Consensus       340 p~  341 (521)
T 1aui_A          340 PY  341 (521)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             87


No 7  
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=1.00  E-value=1  Score=522.93  Aligned_cols=287  Identities=40%  Similarity=0.717  Sum_probs=270.5

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             79999999949998889988432259999999999999998209954752598589806789989999999980999999
Q 002713          534 LHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTA  613 (889)
Q Consensus       534 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~L~~~l~~~g~~~~~  613 (889)
                      .++.+|+.|++.+          .++++++..||++|+++|.+||+++++..|++||||||||+++|.++|+..+.++.+
T Consensus         9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~   78 (309)
T 2ie4_C            9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT   78 (309)
T ss_dssp             HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred             HHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf             9999999997379----------989999999999999999758987733687799815778899999999974999998


Q ss_pred             CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             99630149995243689998199999999976608994899527873000121028948999882788750234455121
Q 002713          614 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQL  693 (889)
Q Consensus       614 ~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~  693 (889)
                            .|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||.+||..+|+..   .+|+.+.++
T Consensus        79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~  149 (309)
T 2ie4_C           79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL  149 (309)
T ss_dssp             ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred             ------EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHH
T ss_conf             ------89991886688877099999999987637883799847888888744644428877631417---899999999


Q ss_pred             CCCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHH
Q ss_conf             27775289990808873388778876977753024883259998112201138999988787965489999127829999
Q 002713          694 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDR  773 (889)
Q Consensus       694 f~~lP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~  773 (889)
                      |++||++++++++++|||||++|.+.++++|+.+.|+.+.+..+ .++|+|||||..   ..+|.+++||.| +.||+++
T Consensus       150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~  224 (309)
T 2ie4_C          150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI  224 (309)
T ss_dssp             TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred             HHHCCCEEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHH-HHHHHHHCCCCC---CCCCCCCCCCCC-CCCCHHH
T ss_conf             98398159986819997888887666788887530566687167-789874179754---555445778862-1338899


Q ss_pred             HHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             99999865970899800112466079549918999504566799897299999938721996992269999
Q 002713          774 VSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP  844 (889)
Q Consensus       774 ~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~~  844 (889)
                      +++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+.+++|+|.+..
T Consensus       225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~  295 (309)
T 2ie4_C          225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR  295 (309)
T ss_dssp             HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred             HHHHHHHCCCEEEEECCCCEECCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf             99999984972898168012387799429939999798640357787079999878985768998578986


No 8  
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=1.00  E-value=1  Score=504.40  Aligned_cols=291  Identities=33%  Similarity=0.595  Sum_probs=268.4

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC----EEEEECCCCCHHHHHHHHHH
Q ss_conf             70479999999949998889988432259999999999999998209954752598----58980678998999999998
Q 002713          531 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE  606 (889)
Q Consensus       531 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~L~~~l~~  606 (889)
                      ....++.++..+.+.+          .+++.++..||.++.++|.+||++++++.|    ++||||||||+.+|+++|+.
T Consensus       165 tl~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~  234 (477)
T 1wao_1          165 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL  234 (477)
T ss_dssp             CHHHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             1799999999997679----------899999999999999997269975973058876069981787877999999997


Q ss_pred             HCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCHHH
Q ss_conf             09999999963014999524368999819999999997660899489952787300012102894899988278875023
Q 002713          607 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA  686 (889)
Q Consensus       607 ~g~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~  686 (889)
                      .+.++...     .|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||..||..+|+.    .+
T Consensus       235 ~~~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~  305 (477)
T 1wao_1          235 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QM  305 (477)
T ss_dssp             HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----TH
T ss_pred             CCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHH----HH
T ss_conf             59998767-----4898366457783629999999999864899668605774077775306839999998629----99


Q ss_pred             HHHHHHHCCCCCEEEEECCEEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             4455121277752899908088733887-788769777530248832599981122011389999887879654899991
Q 002713          687 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPG  765 (889)
Q Consensus       687 ~~~~~~~f~~lP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~  765 (889)
                      |..+.++|++||+++++++++||||||+ +|...++++|+.+.|+.+.+..+ +++|+|||||..   ..+|.+|+||.+
T Consensus       306 ~~~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~  381 (477)
T 1wao_1          306 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS  381 (477)
T ss_dssp             HHHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS
T ss_pred             HHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHH-HHHHHCCCCCCC---CCCCCCCCCCCC
T ss_conf             9999998602883799748289977997866668988997366878895255-554311378876---678685888875


Q ss_pred             EEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEE-CCCCEEEEEEECCCCCC
Q ss_conf             27829999999998659708998001124660795499189995045667998972999999-38721996992269999
Q 002713          766 LVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVV-GRGLVVVPKLIHPLPPP  844 (889)
Q Consensus       766 ~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~-~~~~~~~~~~~~~~~~~  844 (889)
                       +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+ ++++.+.+++|.+.+..
T Consensus       382 -~~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~  460 (477)
T 1wao_1          382 -CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP  460 (477)
T ss_dssp             -EEECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCC
T ss_pred             -EEECHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCC
T ss_conf             -5678899999999849769998998873986991599499996786214688865799999879872778998478999


Q ss_pred             C
Q ss_conf             9
Q 002713          845 L  845 (889)
Q Consensus       845 ~  845 (889)
                      .
T Consensus       461 ~  461 (477)
T 1wao_1          461 N  461 (477)
T ss_dssp             S
T ss_pred             C
T ss_conf             9


No 9  
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=1.00  E-value=1  Score=314.60  Aligned_cols=303  Identities=13%  Similarity=0.147  Sum_probs=241.0

Q ss_pred             CEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEC-C--CC
Q ss_conf             21544899998753534899643368899999995997999998789987544455794899997999599965-8--99
Q 002713           18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR-P--AG   94 (889)
Q Consensus        18 ~~w~~~~~~P~pR~ghs~~~i~~~~~~~~kiyvfGG~~~~~~~~~~~~~~~~~~~~~~di~~yD~~t~~W~~l~-~--~g   94 (889)
                      .+|...+..|..|++|+++ +      +++||||||... .              ..+++|+||+.+++|+.+. +  .+
T Consensus       377 ~~~~~~~~~p~rr~g~~~~-~------~~~iyv~GG~~~-~--------------~~~~v~~yd~~~~~W~~~~~~~p~~  434 (695)
T 2zwa_A          377 YQLLECECPINRKFGDVDV-A------GNDVFYMGGSNP-Y--------------RVNEILQLSIHYDKIDMKNIEVSSS  434 (695)
T ss_dssp             EEEEECCCTTCCBSCEEEE-C------SSCEEEECCBSS-S--------------BCCCEEEEEECSSCEEEEECCCCCS
T ss_pred             EEEECCCCCCCCCEEEEEE-E------CCEEEEECCCCC-C--------------CCCCEEEEECCCCEEEEECCCCCCC
T ss_conf             3675168899883568998-7------999999899898-8--------------7676799988999399812578778


Q ss_pred             CCCCCCCCCEEEEE--CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECC
Q ss_conf             99953474379999--9999999675999986473899993699127999853599999851228999789699999348
Q 002713           95 EPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN  172 (889)
Q Consensus        95 ~~P~~R~~hsa~~i--~~~Iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~  172 (889)
                      .+|.+|.+|+++++  +++||++||.+.....++++|+||+.+++  |+.+   +++|.+|++|+++++.++.+|++||.
T Consensus       435 ~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~--W~~~---~~~p~~R~~h~~~~~~~~~iyv~GG~  509 (695)
T 2zwa_A          435 EVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE--WSMI---KSLSHTRFRHSACSLPDGNVLILGGV  509 (695)
T ss_dssp             CCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE--EEEC---CCCSBCCBSCEEEECTTSCEEEECCB
T ss_pred             CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCC--EEEC---CCCCCCCCCCEEEEECCCEEEEECCC
T ss_conf             999654511789986599899985888999854637997489881--8989---99998750344799769989998887


Q ss_pred             CCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEC-C-CEEEEECCCCCCC-CCCCCEEEEECCCCCEE---
Q ss_conf             9986558589995589973289926899999866410899965-9-7999991489999-95233389962668826---
Q 002713          173 DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-D-GMFLLCGGRDASG-APLADAYGLLMHRNGQW---  246 (889)
Q Consensus       173 ~~~~~l~dv~~yd~~t~~~~W~~i~~~~~~P~~r~~~sa~~~~-d-~~l~v~GG~~~~~-~~l~d~~~ld~~~~~~W---  246 (889)
                      +...   ++|+||+.++  +|+.+...+..|.+|.+|+++++. + ++||++||...++ ..++++|.|++.++ .|   
T Consensus       510 ~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~-~w~~~  583 (695)
T 2zwa_A          510 TEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE-NATEP  583 (695)
T ss_dssp             CSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT-CSSCC
T ss_pred             CCCC---CEEEEECCCC--CEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEECCEEEEECCCC-CCCCC
T ss_conf             7999---8999988999--5688467899997643136899917999899987767999806175799983588-65331


Q ss_pred             -EEEECCCCCCCCCCEEEEEEEC-CEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -9982899999844001899979-99999947789999866888299998999908964577456678899999999647
Q 002713          247 -EWTLAPGVAPSPRYQHAAVFVG-ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLE  324 (889)
Q Consensus       247 -~w~~~~~~~p~~R~~hs~~~~~-~~LyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~  324 (889)
                       +|..+...++.+|++|++++++ ++|||+||...... ....+++++||+.+++|+.+. ++.....         .+.
T Consensus       584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~-~p~~~~~---------~~~  652 (695)
T 2zwa_A          584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIP-ISRRIWE---------DHS  652 (695)
T ss_dssp             EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECC-CCHHHHH---------HSC
T ss_pred             EEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCC-CCCCCEEEEEECCCCEEEEEE-CCCCCCC---------CCC
T ss_conf             57877678999886545699968997999888367788-787780899989999399863-4654457---------878


Q ss_pred             CCCCCCEEEEEECC-EEEEECCCCCCCCCCCCCCCEEECCCC
Q ss_conf             43443328899799-999994788987864323527990389
Q 002713          325 LMRRCRHASASIGV-RIYIYGGLKGAFCADILLDDFLVAENS  365 (889)
Q Consensus       325 p~~R~~h~~~~~~~-~Lyi~GG~~~~~~~~~~~~d~~~l~~~  365 (889)
                      | .+.+|+++++++ +|||+||......+....+++|.++..
T Consensus       653 p-~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~  693 (695)
T 2zwa_A          653 L-MLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI  693 (695)
T ss_dssp             C-CCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred             C-CCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEE
T ss_conf             6-2001368994899899995996475755613651999997


No 10 
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=1.00  E-value=1  Score=310.24  Aligned_cols=276  Identities=18%  Similarity=0.284  Sum_probs=236.4

Q ss_pred             CCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             99998753534899643368899999995997999998789987544455794899997999599965899999534743
Q 002713           24 EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAH  103 (889)
Q Consensus        24 ~~~P~pR~ghs~~~i~~~~~~~~kiyvfGG~~~~~~~~~~~~~~~~~~~~~~di~~yD~~t~~W~~l~~~g~~P~~R~~h  103 (889)
                      .+.|.+|.+|+++.+      +++||+|||.. ..              .++++++||+.+++|+.+.   .+|.+|..|
T Consensus         9 ~~~~~~~~~~~~~~~------~~~i~v~GG~~-~~--------------~~~~~~~~d~~~~~W~~~~---~~p~~r~~~   64 (308)
T 1zgk_A            9 HSSGLVPRGSHAPKV------GRLIYTAGGYF-RQ--------------SLSYLEAYNPSNGTWLRLA---DLQVPRSGL   64 (308)
T ss_dssp             ------------CCC------CCCEEEECCBS-SS--------------BCCCEEEEETTTTEEEECC---CCSSCCBSC
T ss_pred             CCCCEEECCCCCCCC------CCEEEEEECCC-CC--------------CCCEEEEECCCCCEEEECC---CCCCCCCCC
T ss_conf             458703577335677------99899990757-98--------------7632899868999072898---897240113


Q ss_pred             EEEEECCEEEEECCCC---CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf             7999999999996759---9998647389999369912799985359999985122899978969999934899865585
Q 002713          104 AAAAVGTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD  180 (889)
Q Consensus       104 sa~~i~~~Iyv~GG~~---~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~l~d  180 (889)
                      ++++++++||++||..   .....++++|+||+.+++  |+.+   .++|.+|..|+++++++ .+|++||.++...+++
T Consensus        65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~  138 (308)
T 1zgk_A           65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--WSPC---APMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNS  138 (308)
T ss_dssp             EEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE--EEEC---CCCSSCCBTCEEEEETT-EEEEECCEETTEECCC
T ss_pred             EEEEECCEEEEECCCCCCCCCCEECCEEEEECCCCCE--EEEC---CCCCCCCCCCEEEEECC-EEEEECCCCCCCCCCC
T ss_conf             6999999999987976779998111429999899993--8587---98776763218999899-9999858779864553


Q ss_pred             EEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCC
Q ss_conf             89995589973289926899999866410899965979999914899999523338996266882699828999998440
Q 002713          181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY  260 (889)
Q Consensus       181 v~~yd~~t~~~~W~~i~~~~~~P~~r~~~sa~~~~d~~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~w~~~~~~~p~~R~  260 (889)
                      +|+||+.++  +|+.++.+   |.+|..|++++. +++||++||.+.... +++++.|++.++   +|..++.+ |.+|+
T Consensus       139 ~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~~-~~~~~~yd~~~~---~W~~~~~~-p~~r~  207 (308)
T 1zgk_A          139 VERYEPERD--EWHLVAPM---LTRRIGVGVAVL-NRLLYAVGGFDGTNR-LNSAECYYPERN---EWRMITAM-NTIRS  207 (308)
T ss_dssp             EEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSSCB-CCCEEEEETTTT---EEEECCCC-SSCCB
T ss_pred             EEEECCCCC--EEEECCCC---CCCCCCEEEEEE-CCEEEEEECCCCCCC-CCEEEEEECCCC---EEEECCCC-CCCCC
T ss_conf             899889999--18677987---764324079999-999999928789975-762899908999---59668988-77663


Q ss_pred             EEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEE
Q ss_conf             01899979999999477899998668882999989999089645774566788999999996474344332889979999
Q 002713          261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI  340 (889)
Q Consensus       261 ~hs~~~~~~~LyV~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~L  340 (889)
                      .|++++++++|||+||......    .+++++||+.+++|+.+..++.                  +|..|++++++++|
T Consensus       208 ~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i  265 (308)
T 1zgk_A          208 GAGVCVLHNCIYAAGGYDGQDQ----LNSVERYDVETETWTFVAPMKH------------------RRSALGITVHQGRI  265 (308)
T ss_dssp             SCEEEEETTEEEEECCBCSSSB----CCCEEEEETTTTEEEECCCCSS------------------CCBSCEEEEETTEE
T ss_pred             CCEEEEECCEEEEEECCCCCCC----CCEEEEEECCCCCEEECCCCCC------------------CCCCEEEEEECCEE
T ss_conf             0369998999999808789975----6128999089992888998998------------------86320899999999


Q ss_pred             EEECCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             99947889878643235279903898
Q 002713          341 YIYGGLKGAFCADILLDDFLVAENSP  366 (889)
Q Consensus       341 yi~GG~~~~~~~~~~~~d~~~l~~~~  366 (889)
                      |++||.++    ...+++++.++...
T Consensus       266 ~v~GG~~~----~~~~~~v~~yd~~~  287 (308)
T 1zgk_A          266 YVLGGYDG----HTFLDSVECYDPDT  287 (308)
T ss_dssp             EEECCBCS----SCBCCEEEEEETTT
T ss_pred             EEECCCCC----CCCCCEEEEECCCC
T ss_conf             99908588----86353389980899


Done!