Your job contains 1 sequence.
>002714
MMGLTYFMLDQSRKEAEYCMENAFTTYAKIGSSGQQNATRCGLWWVEMLKARHQYKDAAT
VYFRICGEEPLHSAVMLEQASYCYLLSKPPMLHKYGFHLVLSGDRYKKCDQINHAIRTYR
SAVSVYKGSTWSHIKDHVHFHIGQWYAVLGMHDIAVAHMLEKTGKTFEVVKPRLPIINIS
SLKVIFEDHRTYASAEAANVRESLWRSLEEDMIPSLSTARSNWLELQSKLIMKKFEESNI
CVAGEPVKVDIEFKNPLQIPISISNISLICELSTRSDEMESDSNSSTTELQNDEESKLLT
TTGEMNSDTSSFTLSEVDISLGGAETILVQLMVTPKVEGILKIVGVRWRLSGSLVGVYNF
ESNLVKKKIAKGRRKVKSSPSNDLKFIVIKSLPKLEGLIHPLPERAYAGDLRHLVLELKN
QSDFSVKNLKMKVSHPRFLSIGNRDDMTKEFPACLQKMTNAEQSVAGGNFNKMPQAVFSF
PEGISIQGETPLLWPLWYRAAVPGKISLSITIYYEMGDVSSVIKYRLLRMHYNLEVLPSL
NVSFQISPWSSRLQQYLVRMDVVNQTSSENFQIHQLSSVGHQWEISLLQPFDSIFPSESL
FAGQALSCFFMLKNRGESSTSSDDTSSPSRLLGSDVSLQGTADTLFDISGSPLADFHAHE
RLLQRVSQDDTNTVDFIFISQPSKSDSDSGISDPQHLFSHHACHCSILGKTPITWLVDGP
RTLHHNFNASFCEVNLKMTIYNSSDAAMFVRVNTFDSPSSSGQTSEATSPRSAVPSGNQA
GWHDVPVLTDIKVTSQLPLNQVKRSSLLESVSPFIWSGSSASSVRLQPMSTTDIAMKVCL
FSPGTYDLSNYALNWKLLTISGQGNEGETRQSSGSCPGYPYFLTVLQAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002714
(889 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260655 - symbol:l(3)76BDm "lethal (3) 76BDm" spec... 278 1.4e-38 2
UNIPROTKB|Q9Y2L5 - symbol:TRAPPC8 "Trafficking protein pa... 278 1.2e-33 4
>FB|FBgn0260655 [details] [associations]
symbol:l(3)76BDm "lethal (3) 76BDm" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR011990 EMBL:AE014296
Gene3D:1.25.40.10 InterPro:IPR013935 Pfam:PF08626
InterPro:IPR024420 PANTHER:PTHR12975 Pfam:PF12739
GeneTree:ENSGT00390000000568 FlyBase:FBgn0260655 EMBL:BT133116
RefSeq:NP_649135.2 IntAct:Q9VW22 MINT:MINT-311414
EnsemblMetazoa:FBtr0074966 EnsemblMetazoa:FBtr0333896 GeneID:40140
KEGG:dme:Dmel_CG8793 UCSC:CG8793-RA InParanoid:Q9VW22 OMA:LEQASYC
GenomeRNAi:40140 NextBio:817202 Uniprot:Q9VW22
Length = 1319
Score = 278 (102.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 65/165 (39%), Positives = 95/165 (57%)
Query: 1 MMGLTYFMLDQS-RKEAEYCMENAFTTYAKIGSSGQQNATRCGLWWVEMLKARHQYKDAA 59
M L+ FML + RK +Y ME+A Y + QQ ATR L +E LK Y + A
Sbjct: 470 MAALSAFMLGTAQRKTYDY-MEDAIVCYLTVCKL-QQFATRATLLSMECLKTARLYSEVA 527
Query: 60 TVYFRICGEEP-LHSAVMLEQASYCYLLSKPPMLHKYGFHLVLSGDRYKKCDQINHAIRT 118
R+ EE L SA++LEQA+YC+L+++PPM KY FH+VL+G+RY + Q HA R
Sbjct: 528 KQLIRMTNEESDLRSALLLEQAAYCFLVTQPPMHRKYAFHIVLAGNRYSRAGQRKHAYRC 587
Query: 119 YRSAVSVYKGSTWSHIKDHVHFHIG-QWYAVLGMHDIA--VAHML 160
YR A V++ WS +DH+ + + Q Y + + + + AH+L
Sbjct: 588 YRQAYQVFQKREWSLAEDHIQYTVAKQAYMLKQLEEASRSFAHLL 632
Score = 229 (85.7 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 99/420 (23%), Positives = 188/420 (44%)
Query: 202 ESLWRSLEEDMIPSLSTARSN--WLELQSKLIMKKFE---ESNICVAGEPVKVDIEFKNP 256
E +W +EE ++ TA +N ++ S+ + K + E+ + V GEP+++ + N
Sbjct: 710 EPIWNKIEEMLV---ITAANNKPFVFKPSRYLYTKQQPALETPVAVQGEPIELAVTLSNS 766
Query: 257 LQIPISISNISLICELSTRSDEMESDSNSSTTELQNDEESKLLTTTGEMNSDTSSFTLSE 316
+Q I++S I L+ +L+ +DE+ S N+ T E +D +K+ S +S L+E
Sbjct: 767 VQCRIALSEIDLLWKLTLDNDEVLS--NACTYEESSDSANKIAVGAAIKTSCMASIKLAE 824
Query: 317 VDISLGGAETILVQLMVTPKVEGILKIVGVRWRLSG------SLVGVYNFESNLXXXXXX 370
ET+ +L TPK+ G L I+GV R++ SL+G FE+
Sbjct: 825 Q-----AEETLHFKL--TPKLTGRLSILGVVCRVAAGADPAASLLGTLQFETQKIRPHNA 877
Query: 371 XXXXXXXSSPSNDLKFIVIKSLPKLEGLIHPLPERAYAGDLRHLVLELKNQSDFSVKNLK 430
N L ++ LP + P+P R AG++ + + L+N ++ +
Sbjct: 878 KQSSQTVMD--NRLTIKLVPQLPAMNVSFTPVPNRLLAGEIVPVHVTLRNMGIAPIEEIY 935
Query: 431 MKVSHPRFLSI-GNRDDMTKEFPACLQKMTNAEQSVAGGNFN-KMPQAVFSFPEGISIQG 488
+ +PR +S+ M + L+ ++N ++ V + + + P ++
Sbjct: 936 LGCDNPRCVSLLDQHSQMPLAMMSSLRNLSN-DKLVKDKEIRGQRVYRLLNRPGLAALDA 994
Query: 489 ETPLLWPLWYRAA-VPGKISLSITIYYEMGDVS-SVIKYRLLRMHYNLEVLPSLNVSFQI 546
+ LW +A G +L + YY + V+ S IKYRL+R + L+V L
Sbjct: 995 QQVQTISLWVQAPHQAGPFTLRLLFYYSLPTVANSPIKYRLVRHIWQLQVESCLQADSTC 1054
Query: 547 SPWSSRLQQYLVRMDVVNQTSSENFQIHQLSSVG-HQWEISLLQPFDSIFPSESLFAGQA 605
++ + + ++V NQ + E +++ ++S+ + E L I S + GQA
Sbjct: 1055 VVSNAVTNELGLDVNVRNQHAVEGTEVY-INSISLYSTEFKLNPDRLHIMNSMGVSPGQA 1113
>UNIPROTKB|Q9Y2L5 [details] [associations]
symbol:TRAPPC8 "Trafficking protein particle complex
subunit 8" species:9606 "Homo sapiens" [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=NAS] [GO:0005801 "cis-Golgi network"
evidence=NAS] InterPro:IPR011990 GO:GO:0005794 Gene3D:1.25.40.10
GO:GO:0006888 GO:GO:0005801 EMBL:AC022960 EMBL:AB023229
EMBL:AL136749 EMBL:AC009831 EMBL:BC127109 EMBL:BC127110
EMBL:AK001662 IPI:IPI00007253 IPI:IPI00216617 RefSeq:NP_055754.2
UniGene:Hs.202001 ProteinModelPortal:Q9Y2L5 SMR:Q9Y2L5
DIP:DIP-48280N IntAct:Q9Y2L5 STRING:Q9Y2L5 PhosphoSite:Q9Y2L5
DMDM:296452850 PaxDb:Q9Y2L5 PRIDE:Q9Y2L5 DNASU:22878
Ensembl:ENST00000283351 GeneID:22878 KEGG:hsa:22878 UCSC:uc002kxb.4
CTD:22878 GeneCards:GC18M029409 H-InvDB:HIX0014382
H-InvDB:HIX0039822 HGNC:HGNC:29169 HPA:HPA041107 MIM:614136
neXtProt:NX_Q9Y2L5 PharmGKB:PA165429149 eggNOG:NOG330568
HOGENOM:HOG000046881 HOVERGEN:HBG036226 InParanoid:Q9Y2L5
OMA:LPGCHTG OrthoDB:EOG4RXXZB PhylomeDB:Q9Y2L5 ChiTaRS:TRAPPC8
GenomeRNAi:22878 NextBio:43445 PMAP-CutDB:Q9Y2L5 Bgee:Q9Y2L5
CleanEx:HS_KIAA1012 Genevestigator:Q9Y2L5
GermOnline:ENSG00000153339 InterPro:IPR024420 PANTHER:PTHR12975
Pfam:PF12739 Uniprot:Q9Y2L5
Length = 1435
Score = 278 (102.9 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 62/154 (40%), Positives = 90/154 (58%)
Query: 16 AEYCMENAFTTYAKIGSSGQQNATRCGLWWVEMLKARHQYKDAATVYFRICGEEP-LHSA 74
A Y M+ A TY I A RC L E+LK++ +Y +AA + R+ E+ L SA
Sbjct: 482 AHY-MDTAIQTYRDI-CKNMVLAERCVLLSAELLKSQSKYSEAAALLIRLTSEDSDLRSA 539
Query: 75 VMLEQASYCYLLSKPPMLHKYGFHLVLSGDRYKKCDQINHAIRTYRSAVSVYKGSTWSHI 134
++LEQA++C++ K PM+ KY FH++L+G R+ K Q HA+R Y A+ VYKG WS
Sbjct: 540 LLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLA 599
Query: 135 KDHVHFHIGQWYAVLGMHDIAVA---HMLEKTGK 165
+DH++F IG+ L D AV+ H+L K
Sbjct: 600 EDHINFTIGRQSYTLRQLDNAVSAFRHILINESK 633
Score = 129 (50.5 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 65/299 (21%), Positives = 121/299 (40%)
Query: 174 LPIINISSLKVIF-EDHR---------TYASAEAANVRESL--WRSLEEDMIPSLSTA-- 219
LP IN S+ +V F D R T+ S + ES WR LEE ++ ++
Sbjct: 667 LPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEQVVSVVNKGVI 726
Query: 220 RSNWLELQSKLIMKKFEESN---ICVAGEPVKVDIEFKNPLQIPISISNISLICELSTRS 276
SN+ Q + + +++ + V EP+ V++ F+NPL++ + ++++SL+ + +
Sbjct: 727 PSNFHPTQ--YCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVLLLLTDLSLLWKFHPK- 783
Query: 277 DEMESDSNSSTTELQNDEESKL-LTTTGE--MNSDTSSFTLSEV------DISLGGAETI 327
+ N +L E + E +N + S ++ ++ + G
Sbjct: 784 -DFSGKDNEEVKQLVTSEPEMIGAEVISEFLINGEESKVARLKLFPHHIGELHILGVVYN 842
Query: 328 LVQLMVTPKVEGILKIVGV---RWRLSGSLVGVYNFE-SNLXXXXXXXXXXXXXSSPSND 383
L + + V+GI + G ++ LS S+ G + E P
Sbjct: 843 LGTIQGSMTVDGIGALPGCHTGKYSLSMSVRGKQDLEIQGPRLNNTKEEKTSVKYGPDRR 902
Query: 384 LKFIVIKSLPKLEGLIHPLPERAYAGDLRHLVLELKNQSDFSVKNLKMKVSHPRFLSIG 442
L I+ + +P LE P G++R +E N S + LK+ P F + G
Sbjct: 903 LDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTFG 961
Score = 86 (35.3 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 38/151 (25%), Positives = 62/151 (41%)
Query: 447 MTKEFPACLQKMTNAEQSVAGGNFNKMPQAV-FSFPEGISIQGETPLLWPLWYRAA-VPG 504
+T C +++A G P+ + P+ + + G + L P+W R G
Sbjct: 985 VTDATSVCTALISSASSVDFGIGTGSQPEVIPVPLPDTVLLPGASVQL-PMWLRGPDEEG 1043
Query: 505 KISLSITIYYEMGDVSSVIKYRLLRMHYNLEVLPSLNVSFQISPWSS------RLQQYLV 558
++ YYE I++R+LR + SLNV + +S R LV
Sbjct: 1044 VHEINFLFYYESVKKQPKIRHRILRHTAIICTSRSLNVRATVCRSNSLENEEGRGGNMLV 1103
Query: 559 RMDVVNQTSSE----NFQIHQLSSVGHQWEI 585
+DV N +SE F I Q+SS W++
Sbjct: 1104 FVDVENTNTSEAGVKEFHIVQVSSSSKHWKL 1134
Score = 63 (27.2 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 25/94 (26%), Positives = 38/94 (40%)
Query: 784 DVPVLTDIKVTSQLPLNQVKRSSLLESVSPFIWSGSSASSVRLQPMSTTDIAMKVCLFSP 843
DV V+ D++ + P LE F W G + ++L+ + +K C
Sbjct: 1345 DVDVIVDLRHKTTSP-------EALEIHGSFTWLGQTQYKLQLKSQEIHSLQLKACFVHT 1397
Query: 844 GTYDLSNYALNWKLLTISGQGNEGETRQSSGSCP 877
G Y+L + KL S Q ET Q + S P
Sbjct: 1398 GVYNLGTPRVFAKL---SDQVTVFETSQQN-SMP 1427
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 889 864 0.00084 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 627 (67 KB)
Total size of DFA: 443 KB (2210 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 76.32u 0.12s 76.44t Elapsed: 00:00:03
Total cpu time: 76.32u 0.12s 76.44t Elapsed: 00:00:03
Start: Tue May 21 00:11:01 2013 End: Tue May 21 00:11:04 2013