BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002718
(888 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/877 (59%), Positives = 644/877 (73%), Gaps = 29/877 (3%)
Query: 21 IASFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPT 80
+ SFS FT + T FS +F+E A GKQAHA +I+SGF+PT
Sbjct: 30 VPSFSYFTDFLNQVNSVS-------TTNFSFVFKECAKQGALELGKQAHAHMIISGFRPT 82
Query: 81 IFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPE 140
FV NCL+Q+Y + SA VFDKMP RDVVSWN +I GY+ +M A + F MP
Sbjct: 83 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 141 RDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQL 200
RDV+SWNS+LSGYL G+ K+I+VFV+MGR D R+FA+ LK CS LED G+Q+
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 201 HCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKF 260
H +++G D DVV SAL+DMYAK K+ +S+ +F + E+N VSW+ +IAGCVQN
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 261 IEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTAT 320
ALK FK MQK+ G+SQS YAS+LRSCAALS L+LG QLHAHALK+DF D IV TAT
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 321 LDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNE 380
LDMYAKC+NM DAQ +F++ N QSYNA+I GY+Q G +AL LF L SGLGF+E
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 381 ITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDE 440
I+LSG F ACA++ G EGLQ++GLAIKS+L ++CVAN+ +DMYGKCQ + EA VFDE
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 441 MERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYG 500
M RRDAVSWNAIIA QNG ETLF F+SML + +EPDEFT+GS+LKAC G +L YG
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 501
Query: 501 MQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERD-------------- 546
M+IHS I+KSGM SN VG +LIDMY KCGM+EEA+KI R +R
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 561
Query: 547 ------VVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGL 600
VSWN+IISG+ ++SEDA F+ M++MG+ PD FTYAT+LDTC NLA+ GL
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 601 GMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAH 660
G Q+HAQ+IK+E+QSDVYI STLVDMYSKCG++ DSR+MFEKS +RDFVTWNAMICGYAH
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 661 HGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLE 720
HG GEEA+++FE M LEN+KPNH TFIS+LRACAH+GL++KGL YF +M DY L PQL
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP 741
Query: 721 HYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIH-GNVEVAEEAASSLLQ 779
HYS MVDILG+SG++ +AL+LI+EMPFEADDVIWRTLL +C IH NVEVAEEA ++LL+
Sbjct: 742 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 801
Query: 780 LDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDK 839
LDPQDSS Y LLSN+YADAGMW+K+S RR MR K++KEPGCSW+ + D++H FLV DK
Sbjct: 802 LDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDK 861
Query: 840 DHPKCEEIYEKLGLLIGEMKWRGCASDVNYEKVEEHE 876
HP+ EEIYE+LGL+ EMK +S V +VEE +
Sbjct: 862 AHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEED 898
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 534 EAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKM-GVKPDDFTYATLLDTC 592
E+ ++L T R VVS+N ++ +R F ++ ++ V +F++ + C
Sbjct: 3 ESLRLLHMT--RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSF--VFKEC 58
Query: 593 GNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWN 652
+ LG Q HA +I + ++ + L+ +Y+ + + ++F+K P RD V+WN
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 118
Query: 653 AMICGYA-------------------------------HHGLGEEALKVFENMELENVKP 681
MI GY+ +G ++++VF +M E ++
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 682 NHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKL 741
+ TF +L+ C+ + G+ +++ + S ++D+ + + ++L++
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 742 IQEMPFEADDVIWRTLLSIC 761
Q +P E + V W +++ C
Sbjct: 238 FQGIP-EKNSVSWSAIIAGC 256
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 298/828 (35%), Positives = 472/828 (57%), Gaps = 44/828 (5%)
Query: 44 PKTI------TFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNL 97
P TI F+R+ Q D + H ++IV G + ++SN LI LY +
Sbjct: 36 PSTIGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRA--- 92
Query: 98 KSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVG 157
G M AR +FE MPER+++SW++++S G
Sbjct: 93 ----------------------------GGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 158 DFSKAIDVFVEMGRLSGMVDNRSFAVA-LKACSILED-GDFGV-QLHCFAMKMGFDKDVV 214
+ +++ VF+E R N + ++ACS L+ G + V QL F +K GFD+DV
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 215 TGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIG 274
G+ L+D Y K +D + +F+ + E++ V+W T+I+GCV+ + +L+LF + +
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 275 VGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQ 334
V +++L +C+ L L+ G Q+HAH L+ EMD + +D Y KC + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 335 KVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIA 394
K+FN +PN + S+ ++ GY QN EA++LF + K GL + S ++CA +
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 395 GYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIA 454
G QVH IK+NL ++ V NS++DMY KC + +A VFD D V +NA+I
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 455 VQAQNGNE---EETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSG 511
++ G + E L F M ++ P T+ S+L+A A +L QIH + K G
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 512 MGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFS 571
+ ++F GSALID+Y C +++++ + + +D+V WN++ +G+ +E+A F
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 572 YMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCG 631
+ +PD+FT+A ++ GNLA+V LG + H Q++K+ ++ + YI++ L+DMY+KCG
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 632 NVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLR 691
+ +D+ F+ + RD V WN++I YA+HG G++AL++ E M E ++PN+ TF+ VL
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 692 ACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADD 751
AC+H GLVE GL F +ML + + P+ EHY CMV +LGR+G+LNKA +LI++MP +
Sbjct: 665 ACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 752 VIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLM 811
++WR+LLS C GNVE+AE AA + DP+DS ++ +LSNIYA GMW + R M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 812 RQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMK 859
+ V KEPG SWIG+N +VH FL +DK H K +IYE L L+ +++
Sbjct: 784 KVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/683 (27%), Positives = 341/683 (49%), Gaps = 21/683 (3%)
Query: 208 GFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLF 267
G + D + L+++Y++ + + +F +M ERN VSW+T+++ C + + E+L +F
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 268 -KIMQKIGVGISQSTYASILRSCAALSNLK--LGTQLHAHALKTDFEMDVIVGTATLDMY 324
+ + ++ +S +++C+ L + QL + +K+ F+ DV VGT +D Y
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 325 AKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLS 384
K N+ A+ VF++LP ++ +I G + G+ +LQLF L + + + LS
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 385 GAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERR 444
SAC+++ G Q+H ++ L + + N ++D Y KC VI A +F+ M +
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 445 DAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIH 504
+ +SW +++ QN +E + F SM ++PD + S+L +CA AL +G Q+H
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 505 SRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSE 564
+ IK+ +G++ +V ++LIDMY KC + +A+K+ DVV +NA+I G+S
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQW 433
Query: 565 DAHK---FFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISS 621
+ H+ F M ++P T+ +LL +L ++GL Q+H + K + D++ S
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 622 TLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKP 681
L+D+YS C ++DSR++F++ +D V WN+M GY EEAL +F ++L +P
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Query: 682 NHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKL 741
+ TF +++ A ++ V+ G F+ L L + ++D+ + G A K
Sbjct: 554 DEFTFANMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKA 612
Query: 742 IQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQ--LDPQDSSTYILLSNIYADAG 799
D V W +++S HG + A + ++ ++P + T++ + + + AG
Sbjct: 613 FDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP-NYITFVGVLSACSHAG 670
Query: 800 MWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMK 859
+ + LM + + E V + L R K E+ EK+ +
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMV-----SLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 860 WR----GCASDVNYEKVEEHESQ 878
WR GCA N E + EH ++
Sbjct: 726 WRSLLSGCAKAGNVE-LAEHAAE 747
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 201/430 (46%), Gaps = 29/430 (6%)
Query: 35 TTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKC 94
T+ KP S I A G Q HA I + +V+N LI +Y KC
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 95 SNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYL 154
L A KVFD DVV +NA+I GY+ G W
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLG-----------------TQW-------- 433
Query: 155 LVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVV 214
+ +A+++F +M +F L+A + L Q+H K G + D+
Sbjct: 434 ---ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 215 TGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIG 274
GSAL+D+Y+ C L DS +F+ M ++ V WN++ AG VQ + EAL LF +Q
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 275 VGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQ 334
+ T+A+++ + L++++LG + H LK E + + A LDMYAKC + DA
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 335 KVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIA 394
K F+S + + +N++I YA +G+G +ALQ+ + G+ N IT G SAC+
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 395 GYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRD-AVSWNAII 453
+GL+ L ++ + ++ + G+ + +A + ++M + A+ W +++
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLL 730
Query: 454 AVQAQNGNEE 463
+ A+ GN E
Sbjct: 731 SGCAKAGNVE 740
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/784 (35%), Positives = 432/784 (55%), Gaps = 31/784 (3%)
Query: 66 KQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVR 125
+Q HAR++ G + + V N LI LY +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSR-------------------------------N 235
Query: 126 GEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVAL 185
G + +AR +F+ + +D SW +++SG ++AI +F +M L M +F+ L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 186 KACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWV 245
AC +E + G QLH +K+GF D +ALV +Y L + +F+ MS+R+ V
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 246 SWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHA 305
++NT+I G Q +A++LFK M G+ +T AS++ +C+A L G QLHA+
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 306 LKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEAL 365
K F + + A L++YAKC ++ A F + +N ++V Y +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 366 QLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMY 425
++FR +Q + N+ T C + G Q+H IK+N N V + ++DMY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 426 GKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYG 485
K + A + +D VSW +IA Q +++ L F ML + DE
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 486 SVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEER 545
+ + ACAG QAL G QIH++ SG S+L +AL+ +Y +CG +EE+ ++TE
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG 655
Query: 546 DVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLH 605
D ++WNA++SGF + +E+A + F M + G+ ++FT+ + + A + G Q+H
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 606 AQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGE 665
A I K S+ + + L+ MY+KCG++ D+ F + ++ V+WNA+I Y+ HG G
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775
Query: 666 EALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCM 725
EAL F+ M NV+PNH T + VL AC+HIGLV+KG+ YF M S+Y L P+ EHY C+
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835
Query: 726 VDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDS 785
VD+L R+G L++A + IQEMP + D ++WRTLLS C +H N+E+ E AA LL+L+P+DS
Sbjct: 836 VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDS 895
Query: 786 STYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCE 845
+TY+LLSN+YA + WD TR+ M++ V+KEPG SWI V + +H+F V D++HP +
Sbjct: 896 ATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLAD 955
Query: 846 EIYE 849
EI+E
Sbjct: 956 EIHE 959
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 212/800 (26%), Positives = 379/800 (47%), Gaps = 36/800 (4%)
Query: 1 MAYYLWLIRFLSNPQCKTFLIASFSTFTTLK------EGKTTAPAITTKPKT-------- 46
M Y+WL+R + + FL + S+F + + +T P + +
Sbjct: 1 MNKYIWLVRLWHSKEEPMFLRSVSSSFIFIHGVPRKLKTRTVFPTLCGTRRASFAAISVY 60
Query: 47 ITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCS-NLKSALKVFD 105
I+ FQE D +N G +P L++ +K + +L K+
Sbjct: 61 ISEDESFQEKRIDSVEN-----------RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHS 109
Query: 106 KMPQRDVVSWNAL---IFG-YAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
++ + + S L +F Y +G++ A +F+ MPER + +WN ++ +
Sbjct: 110 QILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGE 169
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDG-DFGVQLHCFAMKMGFDKDVVTGSALV 220
+FV M + + +F+ L+AC D Q+H + G V + L+
Sbjct: 170 VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
D+Y++ +D + +F+ + ++ SW +I+G +N EA++LF M +G+ +
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
++S+L +C + +L++G QLH LK F D V A + +Y N+ A+ +F+++
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
+YN +I G +Q G G +A++LF+ + GL + TL+ AC+ G
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
Q+H K SN + ++L++Y KC D+ A F E E + V WN ++
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGS 520
+ + F M + P+++TY S+LK C L G QIHS+IIK+ N +V S
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 521 ALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
LIDMY K G ++ A IL R +DVVSW +I+G++ + A F ML G++
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 581 DDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMF 640
D+ + C L + G Q+HAQ SD+ + LV +YS+CG +++S + F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 641 EKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVE 700
E++ D + WNA++ G+ G EEAL+VF M E + N+ TF S ++A + ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 701 KGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSI 760
+G + +++ + E + ++ + + G ++ A K E+ + ++V W +++
Sbjct: 710 QGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINA 767
Query: 761 CKIHGNVEVAEEAASSLLQL 780
HG EA S Q+
Sbjct: 768 YSKHG---FGSEALDSFDQM 784
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 256/551 (46%), Gaps = 39/551 (7%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+P + T + + + D G+Q HA GF + L+ LY KC+++++AL
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
F + +VV WN ++ Y L+ D +
Sbjct: 446 YFLETEVENVVLWNVMLVAYG-------------------------------LLDDLRNS 474
Query: 163 IDVFVEMGRLSGMVDNR-SFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
+F +M ++ +V N+ ++ LK C L D + G Q+H +K F + S L+D
Sbjct: 475 FRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIE-ALKLFKIMQKIGVGISQS 280
MYAK KLD + + R + ++ VSW T+IAG Q Y F + AL F+ M G+ +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-YNFDDKALTTFRQMLDRGIRSDEV 592
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
+ + +CA L LK G Q+HA A + F D+ A + +Y++C + ++ F
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
++NA++ G+ Q+G EAL++F + + G+ N T A A + A +G
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
QVH + K+ S V N+++ MY KC + +A F E+ ++ VSWNAII +++G
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQ-IHSRIIKSGMGSNLFVG 519
E L F M+H+ + P+ T VL AC+ ++ G+ S + G+
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHY 832
Query: 520 SALIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGV 578
++DM + G++ AK+ ++ + D + W ++S K E ++L++
Sbjct: 833 VCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL-- 890
Query: 579 KPDDFTYATLL 589
+P+D LL
Sbjct: 891 EPEDSATYVLL 901
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 248/508 (48%), Gaps = 42/508 (8%)
Query: 333 AQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRL--LQKSGLGFNEITLSGAFSAC 390
+ VF +L S+ AI V +++ E+ Q R+ ++ G+ N TL C
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISED----ESFQEKRIDSVENRGIRPNHQTLKWLLEGC 94
Query: 391 AVIAGYL-EGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSW 449
G L EG ++H +K L SN C++ + D Y D+ A VFDEM R +W
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 450 NAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKAC-AGQQALNYGMQIHSRII 508
N +I A E F+ M+ + P+E T+ VL+AC G A + QIH+RI+
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214
Query: 509 KSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHK 568
G+ + V + LID+Y + G V+ A+++ +D SW A+ISG S + +A +
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 569 FFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYS 628
F M +G+ P + ++++L C + ++ +G QLH ++K SD Y+ + LV +Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 629 KCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFIS 688
GN+ + +F +RD VT+N +I G + G GE+A+++F+ M L+ ++P+ T S
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 689 VLRACAHIGLVEKG--LHYFNVMLS-------------------------DYSLHPQLEH 721
++ AC+ G + +G LH + L DY L ++E+
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 722 ---YSCMVDILGRSGQLNKALKLIQEMPFE---ADDVIWRTLLSICKIHGNVEVAEEAAS 775
++ M+ G L + ++ ++M E + + ++L C G++E+ E+ S
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 776 SLLQLDPQ-DSSTYILLSNIYADAGMWD 802
+++ + Q ++ +L ++YA G D
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/842 (33%), Positives = 448/842 (53%), Gaps = 39/842 (4%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P TFS + + G+Q H +I G + + L+ +Y KC + A +V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 104 FDKMPQRDVVSWNALIFGYA----------------------------------VR-GEM 128
F+ + + V W L GY +R G++
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 129 GIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKAC 188
AR LF M DV++WN ++SG+ G + AI+ F M + S + L A
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 189 SILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWN 248
I+ + D G+ +H A+K+G ++ GS+LV MY+KC+K++ + +F + E+N V WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 249 TVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKT 308
+I G N + + ++LF M+ G I T+ S+L +CAA +L++G+Q H+ +K
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 309 DFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLF 368
++ VG A +DMYAKC + DA+++F + + ++N II Y Q+ EA LF
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 369 RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKC 428
+ + G+ + L+ AC + G +G QVH L++K L ++ +S++DMY KC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 429 QDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVL 488
+ +A VF + VS NA+IA +QN N EE + F ML + P E T+ +++
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 489 KACAGQQALNYGMQIHSRIIKSGMGSN-LFVGSALIDMYCKC-GMVEEAKKILKRTEERD 546
+AC ++L G Q H +I K G S ++G +L+ MY GM E + + +
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 547 VVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHA 606
+V W ++SG S E+A KF+ M GV PD T+ T+L C L+++ G +H+
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 607 QIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKR-DFVTWNAMICGYAHHGLGE 665
I D S+TL+DMY+KCG+++ S +F++ +R + V+WN++I GYA +G E
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 666 EALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCM 725
+ALK+F++M ++ P+ TF+ VL AC+H G V G F +M+ Y + +++H +CM
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 726 VDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDS 785
VD+LGR G L +A I+ + D +W +LL C+IHG+ E +A L++L+PQ+S
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 786 STYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCE 845
S Y+LLSNIYA G W+K + R++MR V+K PG SWI V + H F DK H +
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIG 996
Query: 846 EI 847
+I
Sbjct: 997 KI 998
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 226/779 (29%), Positives = 371/779 (47%), Gaps = 98/779 (12%)
Query: 93 KCSNLKSALKVFDKMPQR--------DVVSWNALIFGYAVRGEMG--------------I 130
+C KS KVFD+MPQR V +LI G G +G
Sbjct: 55 QCKLFKSR-KVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSY 113
Query: 131 ARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSI 190
A F+ + E+DV +WNS+LS Y +G K + FV + + +F++ L C+
Sbjct: 114 AEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR 172
Query: 191 LEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTV 250
+ +FG Q+HC +KMG +++ G ALVDMYAKC ++ D+ +F + + N V W +
Sbjct: 173 ETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCL 232
Query: 251 IAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLK-------------- 296
+G V+ EA+ +F+ M+ G + +++ + L LK
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 297 -------------------------------------LGTQLHAHALKTDFEMDVIV--- 316
LG+ L A + + ++ ++V
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 317 ------------GTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEA 364
G++ + MY+KC M A KVF +L +NA+I GYA NG+ +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 365 LQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDM 424
++LF ++ SG ++ T + S CA G Q H + IK L N+ V N+++DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 425 YGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTY 484
Y KC + +A +F+ M RD V+WN II Q+ NE E F M + D
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 485 GSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEE 544
S LKAC L G Q+H +K G+ +L GS+LIDMY KCG++++A+K+ E
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE 592
Query: 545 RDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQL 604
VVS NA+I+G+S E+A F ML GV P + T+AT+++ C ++ LG Q
Sbjct: 593 WSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 605 HAQIIKQEMQSD-VYISSTLVDMYSKCGNVQDSRIMF-EKSPKRDFVTWNAMICGYAHHG 662
H QI K+ S+ Y+ +L+ MY + ++ +F E S + V W M+ G++ +G
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 663 LGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHY 722
EEALK ++ M + V P+ ATF++VLR C+ + + +G +++ + L L+
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI---FHLAHDLDEL 768
Query: 723 S--CMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQ 779
+ ++D+ + G + + ++ EM ++ V W +L++ +G E A + S+ Q
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/752 (35%), Positives = 428/752 (56%), Gaps = 6/752 (0%)
Query: 120 FGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNR 179
FG + A LF+ P RD S+ SLL G+ G +A +F+ + RL +D
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 180 SFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRM 239
F+ LK + L D FG QLHC +K GF DV G++LVD Y K D +F+ M
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 240 SERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGT 299
ERN V+W T+I+G +N E L LF MQ G + T+A+ L A G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 300 QLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNG 359
Q+H +K + + V + +++Y KC N+ A+ +F+ + ++N++I GYA NG
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 360 QGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVAN 419
+EAL +F ++ + + +E + + CA + Q+H +K + +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 420 SILDMYGKCQDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIME 478
+++ Y KC +++A +F E+ + VSW A+I+ QN +EE + F M +
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 479 PDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKI 538
P+EFTY +L A + ++H++++K+ + VG+AL+D Y K G VEEA K+
Sbjct: 395 PNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 539 LKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNL-AT 597
+++D+V+W+A+++G++ +E A K F + K G+KP++FT++++L+ C A+
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 598 VGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICG 657
+G G Q H IK + S + +SS L+ MY+K GN++ + +F++ ++D V+WN+MI G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 658 YAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHP 717
YA HG +AL VF+ M+ VK + TFI V AC H GLVE+G YF++M+ D + P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 718 QLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSL 777
EH SCMVD+ R+GQL KA+K+I+ MP A IWRT+L+ C++H E+ AA +
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 778 LQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVR 837
+ + P+DS+ Y+LLSN+YA++G W + + R+LM + V+KEPG SWI V +K ++FL
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Query: 838 DKDHPKCEEIYEKLGLLIGEMKWRGCASDVNY 869
D+ HP ++IY KL L +K G D +Y
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 782
Score = 292 bits (747), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 302/583 (51%), Gaps = 38/583 (6%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
G+Q H + I GF + V L+ Y+K SN K KVFD+M +R+VV+W LI GYA
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA- 170
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
R M + + +F+ M ++ +FA A
Sbjct: 171 RNSMN------------------------------DEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNW 244
L + G G+Q+H +K G DK + ++L+++Y KC + + LF++ ++
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 245 VSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAH 304
V+WN++I+G N +EAL +F M+ V +S+S++AS+++ CA L L+ QLH
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 305 ALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCG-LQSYNAIIVGYAQNGQGVE 363
+K F D + TA + Y+KC M DA ++F + G + S+ A+I G+ QN E
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 364 ALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILD 423
A+ LF +++ G+ NE T S +A VI+ +VH +K+N + V ++LD
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLD 436
Query: 424 MYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFT 483
Y K V EA VF ++ +D V+W+A++A AQ G E + F + ++P+EFT
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFT 496
Query: 484 YGSVLKACAGQQA-LNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRT 542
+ S+L CA A + G Q H IKS + S+L V SAL+ MY K G +E A+++ KR
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 543 EERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGM 602
E+D+VSWN++ISG++ ++ A F M K VK D T+ + C + V G
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 603 QLHAQIIKQ-EMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSP 644
+ +++ ++ +S +VD+YS+ G ++ + + E P
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 276/552 (50%), Gaps = 41/552 (7%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
T+P + TF+ L + G Q H ++ +G TI VSN LI LY+KC N++ A
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
+FDK + VV+WN++I GYA G A +F +M V
Sbjct: 250 ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV------------------ 291
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
RLS SFA +K C+ L++ F QLHC +K GF D +AL+
Sbjct: 292 ---------RLS----ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 222 MYAKCKKLDDSVSLFNRMS-ERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
Y+KC + D++ LF + N VSW +I+G +QN EA+ LF M++ GV ++
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
TY+ IL + +S +++HA +KT++E VGTA LD Y K + +A KVF+ +
Sbjct: 399 TYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVI-AGYLEG 399
+ + +++A++ GYAQ G+ A+++F L K G+ NE T S + CA A +G
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 400 LQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
Q HG AIKS L S++CV++++L MY K ++ A VF +D VSWN++I+ AQ+
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQH 574
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFV 518
G + L F M ++ D T+ V AC + G + +++ +
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 519 GSALIDMYCKCGMVEEAKKILKR-TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMG 577
S ++D+Y + G +E+A K+++ W I++ K++E ++ M
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM- 693
Query: 578 VKPDDFTYATLL 589
KP+D LL
Sbjct: 694 -KPEDSAAYVLL 704
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/753 (35%), Positives = 427/753 (56%), Gaps = 21/753 (2%)
Query: 146 WNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAM 205
W LL + +A+ +V+M L DN +F LKA + L+D + G Q+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 206 KMGFDKDVVT-GSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEAL 264
K G+ D VT + LV++Y KC +F+R+SERN VSWN++I+ K+ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 265 KLFKIMQKIGVGISQSTYASILRSCAALS---NLKLGTQLHAHALKTDFEMDVIVGTATL 321
+ F+ M V S T S++ +C+ L L +G Q+HA+ L+ E++ + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 322 DMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEI 381
MY K ++ ++ + S L ++N ++ QN Q +EAL+ R + G+ +E
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 382 TLSGAFSACAVIAGYLEGLQVHGLAIKS-NLWSNICVANSILDMYGKCQDVIEACHVFDE 440
T+S AC+ + G ++H A+K+ +L N V ++++DMY C+ V+ VFD
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 441 MERRDAVSWNAIIAVQAQNGNEEETLFYFISMLH-AIMEPDEFTYGSVLKACAGQQALNY 499
M R WNA+IA +QN +++E L FI M A + + T V+ AC A +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 500 GMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSG 559
IH ++K G+ + FV + L+DMY + G ++ A +I + E+RD+V+WN +I+G+
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 560 AKRSEDA----HKFFSYMLKMG-------VKPDDFTYATLLDTCGNLATVGLGMQLHAQI 608
++ EDA HK + K+ +KP+ T T+L +C L+ + G ++HA
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 609 IKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEAL 668
IK + +DV + S LVDMY+KCG +Q SR +F++ P+++ +TWN +I Y HG G+EA+
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 669 KVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDI 728
+ M ++ VKPN TFISV AC+H G+V++GL F VM DY + P +HY+C+VD+
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 729 LGRSGQLNKALKLIQEMPFEADDV-IWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSST 787
LGR+G++ +A +L+ MP + + W +LL +IH N+E+ E AA +L+QL+P +S
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 723
Query: 788 YILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEI 847
Y+LL+NIY+ AG+WDK + RR M++ VRKEPGCSWI D+VH F+ D HP+ E++
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Query: 848 YEKLGLLIGEMKWRGCASDVN--YEKVEEHESQ 878
L L M+ G D + VEE E +
Sbjct: 784 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816
Score = 276 bits (705), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 193/677 (28%), Positives = 332/677 (49%), Gaps = 72/677 (10%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFK-PTIFVSNCLIQLYIKCSNLKSAL 101
KP F + + + Q GKQ HA + G+ ++ V+N L+ LY KC + +
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
KVFD+ + ER+ +SWNSL+S +
Sbjct: 154 KVFDR-------------------------------ISERNQVSWNSLISSLCSFEKWEM 182
Query: 162 AIDVFVEMGRLSGMVDNRSFAV--ALKACSIL---EDGDFGVQLHCFAMKMGFDKDVVTG 216
A++ F M L V+ SF + + ACS L E G Q+H + ++ G +
Sbjct: 183 ALEAFRCM--LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN 240
Query: 217 SALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVG 276
+ LV MY K KL S L R+ V+WNTV++ QN + +EAL+ + M GV
Sbjct: 241 T-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 277 ISQSTYASILRSCAALSNLKLGTQLHAHALKT-DFEMDVIVGTATLDMYAKCNNMSDAQK 335
+ T +S+L +C+ L L+ G +LHA+ALK + + VG+A +DMY C + ++
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 336 VFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKS-GLGFNEITLSGAFSACAVIA 394
VF+ + + + +NA+I GY+QN EAL LF +++S GL N T++G AC
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 395 GYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIA 454
+ +HG +K L + V N+++DMY + + A +F +ME RD V+WN +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 455 VQAQNGNEEETLFYFISMLH-----------AIMEPDEFTYGSVLKACAGQQALNYGMQI 503
+ + E+ L M + ++P+ T ++L +CA AL G +I
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 504 HSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRS 563
H+ IK+ + +++ VGSAL+DMY KCG ++ ++K+ + +++V++WN II +
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 564 EDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQ----EMQSDVYI 619
++A M+ GVKP++ T+ ++ C + V G+++ ++K E SD Y
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHY- 657
Query: 620 SSTLVDMYSKCGNVQDSRIMFEKSPKRDFV---TWNAMICGYAHHG---LGEEALKVFEN 673
+ +VD+ + G ++++ + P RDF W++++ H +GE A +
Sbjct: 658 -ACVVDLLGRAGRIKEAYQLMNMMP-RDFNKAGAWSSLLGASRIHNNLEIGEIAAQ---- 711
Query: 674 MELENVKPNHATFISVL 690
L ++PN A+ +L
Sbjct: 712 -NLIQLEPNVASHYVLL 727
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 37 APAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSN 96
A ++ KP +IT I A GK+ HA I + + V + L+ +Y KC
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 97 LKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAM 138
L+ + KVFD++PQ++V++WN +I Y + G A L M
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/779 (33%), Positives = 423/779 (54%), Gaps = 49/779 (6%)
Query: 59 DQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNAL 118
++ + GK H ++ G K ++ N L+ LYI+C + A KVFD+M RDV SWNA
Sbjct: 19 ERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAF 78
Query: 119 IFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDN 178
+ G++G A +F+ MPERDV+SWN+++S + G KA+ V+ M G + +
Sbjct: 79 LTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM-VCDGFLPS 137
Query: 179 R-SFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKL-DDSVSLF 236
R + A L ACS + DG FG++ H A+K G DK++ G+AL+ MYAKC + D V +F
Sbjct: 138 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 237 NRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASIL------RSCA 290
+S+ N VS+ VI G + K +EA+++F++M + GV + ++IL C
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 291 ALSNL---KLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQS 347
+LS + +LG Q+H AL+ F D+ + + L++YAK +M+ A+ +F +P + S
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 348 YNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAI 407
+N +IVG+ Q + ++++ ++ SG NE+T AC
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF---------------- 361
Query: 408 KSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLF 467
+ DV +F + + +WNA+++ + + EE +
Sbjct: 362 -------------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 468 YFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYC 527
F M ++PD+ T +L +CA + L G QIH +I++ + N + S LI +Y
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS 462
Query: 528 KCGMVEEAKKILKR-TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK-PDDFTY 585
+C +E ++ I E D+ WN++ISGF A F M + V P++ ++
Sbjct: 463 ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 586 ATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPK 645
AT+L +C L ++ G Q H ++K SD ++ + L DMY KCG + +R F+ +
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 646 RDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHY 705
++ V WN MI GY H+G G+EA+ ++ M KP+ TF+SVL AC+H GLVE GL
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 706 FNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHG 765
+ M + + P+L+HY C+VD LGR+G+L A KL + P+++ V+W LLS C++HG
Sbjct: 643 LSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
Query: 766 NVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSW 824
+V +A A L++LDPQ S+ Y+LLSN Y+ WD + + LM +N+V K PG SW
Sbjct: 703 DVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 42/306 (13%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
KP T S I + GKQ H +I + + + LI +Y +C ++ +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 103 VFDK-MPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
+FD + + D+ WN++I G+ +++L +K
Sbjct: 473 IFDDCINELDIACWNSMISGFR-----------------------HNMLD--------TK 501
Query: 162 AIDVFVEMGRLSGMVDNR-SFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
A+ +F M + + + N SFA L +CS L G Q H +K G+ D +AL
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
DMY KC ++D + F+ + +N V WN +I G N + EA+ L++ M G
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 621
Query: 281 TYASILRSCAALSNLKLGTQL-----HAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQK 335
T+ S+L +C+ ++ G ++ H ++ + + + + +D + + DA+K
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI----VDCLGRAGRLEDAEK 677
Query: 336 VFNSLP 341
+ + P
Sbjct: 678 LAEATP 683
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 167/403 (41%), Gaps = 76/403 (18%)
Query: 486 SVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEER 545
S+L+ ++ G IH I++ GM S+ ++ + L+D+Y +CG + A+K+ R
Sbjct: 11 SLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR 70
Query: 546 DVVSWNAIIS-------------GFSGAKR------------------SEDAHKFFSYML 574
DV SWNA ++ F G E A + M+
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 575 KMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQ 634
G P FT A++L C + GM+ H +K + ++++ + L+ MY+KCG +
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 635 DSRI-MFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRAC 693
D + +FE + + V++ A+I G A EA+++F M + V+ + ++L
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 694 A--------------------HIGLVEKG----LHYFNVMLSDYSLH------------- 716
A H + G LH N +L Y+ +
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 717 PQLEHYSCMVDILG-----RSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAE 771
P++ S + I+G RS + + L +++ F+ ++V ++L C G+VE
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 772 EAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQN 814
SS+ Q P S+ +LS + +S R++ QN
Sbjct: 371 RIFSSIPQ--PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/690 (36%), Positives = 395/690 (57%), Gaps = 9/690 (1%)
Query: 178 NRSFAVALK-------ACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLD 230
N SF + L+ ACS G ++H + D + + ++ MY KC L
Sbjct: 60 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLR 119
Query: 231 DSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCA 290
D+ +F+ M ERN VS+ +VI G QN + EA++L+ M + + Q + SI+++CA
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 291 ALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNA 350
+ S++ LG QLHA +K + +I A + MY + N MSDA +VF +P L S+++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 351 IIVGYAQNGQGVEALQLFRLLQKSGLGF-NEITLSGAFSACAVIAGYLEGLQVHGLAIKS 409
II G++Q G EAL + + G+ NE + AC+ + G Q+HGL IKS
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 410 NLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYF 469
L N S+ DMY +C + A VFD++ER D SWN IIA A NG +E + F
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359
Query: 470 ISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKC 529
M + PD + S+L A AL+ GMQIHS IIK G ++L V ++L+ MY C
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC 419
Query: 530 GMVEEAKKILKRTEER-DVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATL 588
+ + + D VSWN I++ ++ + + F ML +PD T L
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 589 LDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDF 648
L C ++++ LG Q+H +K + + +I + L+DMY+KCG++ +R +F+ RD
Sbjct: 480 LRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV 539
Query: 649 VTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNV 708
V+W+ +I GYA G GEEAL +F+ M+ ++PNH TF+ VL AC+H+GLVE+GL +
Sbjct: 540 VSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 709 MLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVE 768
M +++ + P EH SC+VD+L R+G+LN+A + I EM E D V+W+TLLS CK GNV
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
Query: 769 VAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVN 828
+A++AA ++L++DP +S+ ++LL +++A +G W+ + R M+++ V+K PG SWI +
Sbjct: 660 LAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Query: 829 DKVHTFLVRDKDHPKCEEIYEKLGLLIGEM 858
DK+H F D HP+ ++IY L + +M
Sbjct: 720 DKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 293 bits (749), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 179/619 (28%), Positives = 313/619 (50%), Gaps = 45/619 (7%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
G++ H ++ S K ++N ++ +Y KC +L+ A +VFD MP+R++VS+ ++I GY+
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
G+ A L+ M + D++ D +F
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVP-------------------------------DQFAFGSI 174
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNW 244
+KAC+ D G QLH +K+ ++ +AL+ MY + ++ D+ +F + ++
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 245 VSWNTVIAGCVQNYKFIEALKLFKIMQKIGV-GISQSTYASILRSCAALSNLKLGTQLHA 303
+SW+++IAG Q EAL K M GV ++ + S L++C++L G+Q+H
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 304 HALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVE 363
+K++ + I G + DMYA+C ++ A++VF+ + S+N II G A NG E
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 364 ALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILD 423
A+ +F ++ SG + I+L A +G+Q+H IK +++ V NS+L
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 424 MYGKCQDVIEACHVFDEMERR-DAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEF 482
MY C D+ ++F++ D+VSWN I+ Q+ E L F ML + EPD
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 483 TYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRT 542
T G++L+ C +L G Q+H +K+G+ F+ + LIDMY KCG + +A++I
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 543 EERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGM 602
+ RDVVSW+ +I G++ + E+A F M G++P+ T+ +L C ++ V G+
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 603 QLHAQIIKQEMQSDVYISST------LVDMYSKCGNVQDS-RIMFEKSPKRDFVTWNAMI 655
+L+A MQ++ IS T +VD+ ++ G + ++ R + E + D V W ++
Sbjct: 595 KLYAT-----MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLL 649
Query: 656 CGYAHHGLGEEALKVFENM 674
G A K EN+
Sbjct: 650 SACKTQGNVHLAQKAAENI 668
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 263/559 (47%), Gaps = 37/559 (6%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P F I + GKQ HA++I + N LI +Y++ + + A +V
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F +P +D++SW+++I G++ ++G FEA+ S L L G F
Sbjct: 226 FYGIPMKDLISWSSIIAGFS---QLGFE---FEAL---------SHLKEMLSFGVFHP-- 268
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
+ F +LKACS L D+G Q+H +K + + G +L DMY
Sbjct: 269 -------------NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
A+C L+ + +F+++ + SWN +IAG N EA+ +F M+ G +
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S+L + L G Q+H++ +K F D+ V + L MY C+++ +F N
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 344 GLQ-SYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQV 402
S+N I+ Q+ Q VE L+LF+L+ S + IT+ C I+ G QV
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 403 HGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNE 462
H ++K+ L + N ++DMY KC + +A +FD M+ RD VSW+ +I AQ+G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555
Query: 463 EETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRI-IKSGMGSNLFVGSA 521
EE L F M A +EP+ T+ VL AC+ + G+++++ + + G+ S
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615
Query: 522 LIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
++D+ + G + EA++ + + E DVV W ++S A K +LK + P
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK--IDP 673
Query: 581 DDFTYATLLDTCGNLATVG 599
+ T LL C A+ G
Sbjct: 674 FNSTAHVLL--CSMHASSG 690
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+P IT + + + G Q H + +G P F+ N LI +Y KC +L A +
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMP----ERDVISWNSLLSGYLLVGD 158
+FD M RDVVSW+ LI GYA G A LF+ M E + +++ +L+ VG
Sbjct: 530 IFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 159 FSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSA 218
+ + ++ M G+ + HC S
Sbjct: 590 VEEGLKLYATMQTEHGISPTKE--------------------HC--------------SC 615
Query: 219 LVDMYAKCKKLDDSVSLFNRMS-ERNWVSWNTVIAGC 254
+VD+ A+ +L+++ + M E + V W T+++ C
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/820 (32%), Positives = 430/820 (52%), Gaps = 33/820 (4%)
Query: 46 TITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFD 105
TF + + + + GK H ++V G++ F++ L+ +Y+KC L A++VFD
Sbjct: 60 VFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD 119
Query: 106 KMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDV 165
Q + RDV WNS++ GY F + +
Sbjct: 120 GWSQSQ------------------------SGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 166 FVEMGRLSGMVDNRSFAVALKACSILEDGDF----GVQLHCFAMKMGFDKDVVTGSALVD 221
F M L V +F++++ + ++G+F G Q+H F ++ D D +AL+D
Sbjct: 156 FRRM--LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 222 MYAKCKKLDDSVSLFNRMSER-NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
MY K D+ +F + ++ N V WN +I G + +L L+ + + V + +
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
++ L +C+ N G Q+H +K D V T+ L MY+KC + +A+ VF+ +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
+ L+ +NA++ YA+N G AL LF +++ + + TLS S C+V+ Y G
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
VH K + S + +++L +Y KC +A VF ME +D V+W ++I+ +NG
Sbjct: 394 SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNG 453
Query: 461 NEEETLFYFISMLHA--IMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFV 518
+E L F M ++PD SV ACAG +AL +G+Q+H +IK+G+ N+FV
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFV 513
Query: 519 GSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGV 578
GS+LID+Y KCG+ E A K+ ++V+WN++IS +S E + F+ ML G+
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI 573
Query: 579 KPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRI 638
PD + ++L + A++ G LH ++ + SD ++ + L+DMY KCG + +
Sbjct: 574 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 639 MFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGL 698
+F+K + +TWN MI GY HG AL +F+ M+ P+ TF+S++ AC H G
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693
Query: 699 VEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLL 758
VE+G + F M DY + P +EHY+ MVD+LGR+G L +A I+ MP EAD IW LL
Sbjct: 694 VEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLL 753
Query: 759 SICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRK 818
S + H NVE+ +A LL+++P+ STY+ L N+Y +AG+ ++ + LM++ + K
Sbjct: 754 SASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHK 813
Query: 819 EPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEM 858
+PGCSWI V+D+ + F P EI+ L L M
Sbjct: 814 QPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 272/527 (51%), Gaps = 15/527 (2%)
Query: 246 SWNTVIAGCVQNYKFIEALKLF-KIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAH 304
S N+ I +Q ++++AL L+ K S T+ S+L++C+AL+NL G +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 305 ALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN--SLPNCGLQS-----YNAIIVGYAQ 357
+ + D + T+ ++MY KC + A +VF+ S G+ + +N++I GY +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 358 NGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYL--EGLQVHGLAIKSNLWSNI 415
+ E + FR + G+ + +LS S + EG Q+HG ++++L ++
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 416 CVANSILDMYGKCQDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGNEEETLFYFISMLH 474
+ +++DMY K I+A VF E+E + + V WN +I +G E +L ++ +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 475 AIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEE 534
++ ++ L AC+ + +G QIH ++K G+ ++ +V ++L+ MY KCGMV E
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 535 AKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGN 594
A+ + ++ + WNA+++ ++ A F +M + V PD FT + ++ C
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 595 LATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAM 654
L G +HA++ K+ +QS I S L+ +YSKCG D+ ++F+ ++D V W ++
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 655 ICGYAHHGLGEEALKVFENM--ELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSD 712
I G +G +EALKVF +M + +++KP+ SV ACA + + GL M+
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 713 YSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLS 759
L + S ++D+ + G ALK+ M E + V W +++S
Sbjct: 506 -GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS 550
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 195/440 (44%), Gaps = 33/440 (7%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P + T S + + N GK HA L + T + + L+ LY KC A V
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F M ++D+V+W +LI G G+ A +F M + D +SL
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD----DSLKP------------ 474
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
D+ AC+ LE FG+Q+H +K G +V GS+L+D+Y
Sbjct: 475 -------------DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
+KC + ++ +F MS N V+WN++I+ +N ++ LF +M G+ +
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S+L + ++ ++L G LH + L+ D + A +DMY KC A+ +F + +
Sbjct: 582 SVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
L ++N +I GY +G + AL LF ++K+G +++T SAC EG +
Sbjct: 642 SLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF 701
Query: 404 GLAIKS-NLWSNICVANSILDMYGKCQDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGN 461
+ + N+ +++D+ G+ + EA M D+ W +++ + N
Sbjct: 702 EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHN 761
Query: 462 EEETLFYFISMLHAIMEPDE 481
E + +L MEP+
Sbjct: 762 VELGILSAEKLLR--MEPER 779
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 31/249 (12%)
Query: 41 TTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSA 100
+ KP + + + +A G Q H +I +G +FV + LI LY KC + A
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 101 LKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFS 160
LKVF M ++V+WN++I Y+ +PE + +N +LS G F
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNN-----------LPELSIDLFNLMLSQ----GIFP 575
Query: 161 KAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
++ + S VA+ + + L G LH + +++G D +AL+
Sbjct: 576 DSVSI-------------TSVLVAISSTASLLKGK---SLHGYTLRLGIPSDTHLKNALI 619
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
DMY KC + ++F +M ++ ++WN +I G + I AL LF M+K G
Sbjct: 620 DMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 281 TYASILRSC 289
T+ S++ +C
Sbjct: 680 TFLSLISAC 688
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/665 (34%), Positives = 375/665 (56%), Gaps = 72/665 (10%)
Query: 266 LFKIMQKIGVGISQSTYASILRSC--AALSNLKLGTQLHAHALKTDFEMDVIVGTATLDM 323
K+ + S +A +L SC + LS + + +HA +K+ F ++ + +D
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 324 YAKCNNMSDAQKVFNSLPNCGLQSYNAIIVG----------------------------- 354
Y+KC ++ D ++VF+ +P + ++N+++ G
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 355 --YAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLW 412
+AQ+ + EAL F ++ K G NE + + SAC+ + +G+QVH L KS
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 413 SNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISM 472
S++ + ++++DMY KC +V +A VFDEM R+ VSWN++I QNG E L F M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 473 LHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSG-MGSNLFVGSALIDMYCKCGM 531
L + +EPDE T SV+ ACA A+ G ++H R++K+ + +++ + +A +DMY KC
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 532 VEEAKKILK-------------------------------RTEERDVVSWNAIISGFSGA 560
++EA+ I + ER+VVSWNA+I+G++
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 561 KRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEM------Q 614
+E+A F + + V P +++A +L C +LA + LGMQ H ++K +
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 615 SDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM 674
D+++ ++L+DMY KCG V++ ++F K +RD V+WNAMI G+A +G G EAL++F M
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 675 ELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQ 734
KP+H T I VL AC H G VE+G HYF+ M D+ + P +HY+CMVD+LGR+G
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 735 LNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNI 794
L +A +I+EMP + D VIW +LL+ CK+H N+ + + A LL+++P +S Y+LLSN+
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNM 604
Query: 795 YADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLL 854
YA+ G W+ + R+ MR+ V K+PGCSWI + H F+V+DK HP+ ++I+ L +L
Sbjct: 605 YAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Query: 855 IGEMK 859
I EM+
Sbjct: 665 IAEMR 669
Score = 317 bits (812), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 205/625 (32%), Positives = 318/625 (50%), Gaps = 77/625 (12%)
Query: 66 KQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVR 125
+ HA +I SGF IF+ N LI Y KC +L+ +VFDKMPQR++ +WN+++ G
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 126 GEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVAL 185
G + A +LF +MPERD +WNS++SG+ +A+ F M + +++ SFA L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 186 KACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWV 245
ACS L D + GVQ+H K F DV GSALVDMY+KC ++D+ +F+ M +RN V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 246 SWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHA 305
SWN++I QN +EAL +F++M + V + T AS++ +CA+LS +K+G ++H
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 306 LKTD-FEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP----------------------- 341
+K D D+I+ A +DMYAKC+ + +A+ +F+S+P
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 342 --------NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVI 393
+ S+NA+I GY QNG+ EAL LF LL++ + + + ACA +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 394 AGYLEGLQV------HGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAV 447
A G+Q HG +S +I V NS++DMY KC V E VF +M RD V
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 448 SWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRI 507
SWNA+I AQNG E L F ML + +PD T VL AC + G S +
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 508 IKS-GMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDA 566
+ G+ + ++D+ + G +EEAK +++
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE-------------------------- 553
Query: 567 HKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQE-MQSDVYISSTLVD 625
+M ++PD + +LL C + LG + ++++ E S Y+ L +
Sbjct: 554 --------EMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV--LLSN 603
Query: 626 MYSKCGNVQDSRIMFEKSPKRDFVT 650
MY++ G +D + KS +++ VT
Sbjct: 604 MYAELGKWEDV-MNVRKSMRKEGVT 627
Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 242/545 (44%), Gaps = 115/545 (21%)
Query: 48 TFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKM 107
+F+ + + N G Q H+ + S F +++ + L+ +Y KC N+ A +VFD+M
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 108 PQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFV 167
R+VVSWN+LI T FE G +A+DVF
Sbjct: 214 GDRNVVSWNSLI-------------TCFEQN------------------GPAVEALDVFQ 242
Query: 168 EMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMG-FDKDVVTGSALVDMYAKC 226
M D + A + AC+ L G ++H +K D++ +A VDMYAKC
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 302
Query: 227 KKLD------DSVS-------------------------LFNRMSERNWVSWNTVIAGCV 255
++ DS+ +F +M+ERN VSWN +IAG
Sbjct: 303 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 362
Query: 256 QNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDF----- 310
QN + EAL LF ++++ V + ++A+IL++CA L+ L LG Q H H LK F
Sbjct: 363 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 422
Query: 311 -EMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFR 369
E D+ VG + +DMY KC + + VF + S+NA+I+G+AQNG G EAL+LFR
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 370 LLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQ 429
+ +SG + IT+ G SAC AG++E
Sbjct: 483 EMLESGEKPDHITMIGVLSACG-HAGFVE------------------------------- 510
Query: 430 DVIEACHVFDEMERRDAVS-----WNAIIAVQAQNGNEEETLFYFISMLHAI-MEPDEFT 483
E H F M R V+ + ++ + + G EE SM+ + M+PD
Sbjct: 511 ---EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK----SMIEEMPMQPDSVI 563
Query: 484 YGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTE 543
+GS+L AC + + G + ++++ SN L +MY + G E+ + K
Sbjct: 564 WGSLLAACKVHRNITLGKYVAEKLLEVE-PSNSGPYVLLSNMYAELGKWEDVMNVRKSMR 622
Query: 544 ERDVV 548
+ V
Sbjct: 623 KEGVT 627
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFK------PTIFVSNCLIQLYIKCSNL 97
P +F+ I + + G QAH ++ GFK IFV N LI +Y+KC +
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 98 KSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPER----DVISWNSLLSGY 153
+ VF KM +RD VSWNA+I G+A G A LF M E D I+ +LS
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 154 LLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
G FVE GR R F VA
Sbjct: 504 GHAG--------FVEEGRHYFSSMTRDFGVA 526
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 276/808 (34%), Positives = 435/808 (53%), Gaps = 44/808 (5%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
G+Q H + + VSN LI +Y KC
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCI----------------------------- 153
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSF-AV 183
G +G A F + ++ +SWNS++S Y GD A +F M +F ++
Sbjct: 154 -GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 184 ALKACSILE-DGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSER 242
ACS+ E D Q+ C K G D+ GS LV +AK L + +FN+M R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 243 NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALS-----NLKL 297
N V+ N ++ G V+ EA KLF M + + +S +Y +L S S LK
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKK 331
Query: 298 GTQLHAHALKTDF-EMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYA 356
G ++H H + T + V +G ++MYAKC +++DA++VF + + S+N++I G
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 357 QNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNIC 416
QNG +EA++ ++ +++ + TL + S+CA + G Q+HG ++K + N+
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 417 VANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNE-EETLFYFISMLHA 475
V+N+++ +Y + + E +F M D VSWN+II A++ E + F++ A
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 476 IMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEA 535
+ + T+ SVL A + G QIH +K+ + +ALI Y KCG ++
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 536 KKILKR-TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGN 594
+KI R E RD V+WN++ISG+ + A +ML+ G + D F YAT+L +
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 595 LATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAM 654
+AT+ GM++HA ++ ++SDV + S LVDMYSKCG + + F P R+ +WN+M
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 655 ICGYAHHGLGEEALKVFENMELE-NVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDY 713
I GYA HG GEEALK+FE M+L+ P+H TF+ VL AC+H GL+E+G +F M Y
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 751
Query: 714 SLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLL-SICKIHGN-VEVAE 771
L P++EH+SCM D+LGR+G+L+K I++MP + + +IWRT+L + C+ +G E+ +
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811
Query: 772 EAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKV 831
+AA L QL+P+++ Y+LL N+YA G W+ L R+ M+ V+KE G SW+ + D V
Sbjct: 812 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGV 871
Query: 832 HTFLVRDKDHPKCEEIYEKLGLLIGEMK 859
H F+ DK HP + IY+KL L +M+
Sbjct: 872 HMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 266 bits (681), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 207/744 (27%), Positives = 365/744 (49%), Gaps = 28/744 (3%)
Query: 83 VSNCLIQLYIK-CSNLKSALKVF-----DKMPQRDVVSWNALIFGYAVRGEMGIARTLFE 136
++NC+ +++ C + A + F +DV N LI Y G+ AR +F+
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 137 AMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGD- 195
MP R+ +SW ++SGY G+ +A+ +M + + +F L+AC E G
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQ--EIGSV 118
Query: 196 ---FGVQLHCFAMKMGFDKDVVTGSALVDMYAKC-KKLDDSVSLFNRMSERNWVSWNTVI 251
FG Q+H K+ + D V + L+ MY KC + ++ F + +N VSWN++I
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII 178
Query: 252 AGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALS--NLKLGTQLHAHALKTD 309
+ Q A ++F MQ G ++ T+ S++ + +L+ +++L Q+ K+
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG 238
Query: 310 FEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLF- 368
D+ VG+ + +AK ++S A+KVFN + + N ++VG + G EA +LF
Sbjct: 239 LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFM 298
Query: 369 ---RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWS-NICVANSILDM 424
++ S + + S + A G +G +VHG I + L + + N +++M
Sbjct: 299 DMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 425 YGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTY 484
Y KC + +A VF M +D+VSWN++I QNG E + + SM + P FT
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 485 GSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEE 544
S L +CA + G QIH +K G+ N+ V +AL+ +Y + G + E +KI E
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 545 RDVVSWNAIISGFSGAKRS-EDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQ 603
D VSWN+II + ++RS +A F + G K + T++++L +L+ LG Q
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 604 LHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEK-SPKRDFVTWNAMICGYAHHG 662
+H +K + + + L+ Y KCG + +F + + +RD VTWN+MI GY H+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 663 LGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHY 722
L +AL + M + + + +VL A A + +E+G+ + L +
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVG 657
Query: 723 SCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLD- 781
S +VD+ + G+L+ AL+ MP + W +++S HG E A + + ++LD
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFET-MKLDG 715
Query: 782 --PQDSSTYILLSNIYADAGMWDK 803
P D T++ + + + AG+ ++
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEE 739
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 268/552 (48%), Gaps = 44/552 (7%)
Query: 56 LTHDQAQNPGKQAHARLIVSGFKP-TIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVS 114
L + G++ H +I +G + + N L+ +Y KC ++ A +VF M +D VS
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 115 WNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSG 174
WN++I G G A +++M D+ L G F
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDI-----------LPGSF--------------- 416
Query: 175 MVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVS 234
+ +L +C+ L+ G Q+H ++K+G D +V +AL+ +YA+ L++
Sbjct: 417 -----TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 235 LFNRMSERNWVSWNTVIAGCVQNYKFI-EALKLFKIMQKIGVGISQSTYASILRSCAALS 293
+F+ M E + VSWN++I ++ + + EA+ F Q+ G +++ T++S+L + ++LS
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 294 NLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQ-SYNAII 352
+LG Q+H ALK + + A + Y KC M +K+F+ + ++N++I
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 353 VGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLW 412
GY N +AL L + ++G + + SA A +A G++VH ++++ L
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 413 SNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISM 472
S++ V ++++DMY KC + A F+ M R++ SWN++I+ A++G EE L F +M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 473 -LHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSALIDMYCKCG 530
L PD T+ VL AC+ L G + + S G+ + S + D+ + G
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAG 771
Query: 531 MVEEAKKILKRTEER-DVVSWNAIISG--FSGAKRSEDAHKFFSYMLKMGVKPDDFTYAT 587
+++ + +++ + +V+ W ++ + +++E K + ++ +P++
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL--EPENAVNYV 829
Query: 588 LLDTCGNLATVG 599
LL GN+ G
Sbjct: 830 LL---GNMYAAG 838
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 208/418 (49%), Gaps = 24/418 (5%)
Query: 403 HGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNE 462
H K+ L ++ + N++++ Y + D + A VFDEM R+ VSW I++ ++NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 463 EETLFYFISMLHAIMEPDEFTYGSVLKACA--GQQALNYGMQIHSRIIKSGMGSNLFVGS 520
+E L + M+ + +++ + SVL+AC G + +G QIH + K + V +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 521 ALIDMYCKC-GMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK 579
LI MY KC G V A E ++ VSWN+IIS +S A A + FS M G +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 580 PDDFTYATLLDTCGNLAT--VGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSR 637
P ++T+ +L+ T +L V L Q+ I K + +D+++ S LV ++K G++ +R
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 638 IMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM-ELENVKPNHATFISVLRACAHI 696
+F + R+ VT N ++ G GEEA K+F +M + +V P +++ +L +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEY 321
Query: 697 GLVEK-GL--------HYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPF 747
L E+ GL H L D+ + + +V++ + G + A ++ M
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIG----NGLVNMYAKCGSIADARRVFYFMT- 376
Query: 748 EADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGM-WDKL 804
+ D V W ++++ +G A E S+ + D S + L+S++ + A + W KL
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS-FTLISSLSSCASLKWAKL 433
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 395/667 (59%), Gaps = 9/667 (1%)
Query: 201 HCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKF 260
HC+A+K G D+ + ++D Y K L + LF+ M +R+ VSWNT+I+G K
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 261 IEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTAT 320
+A LF M++ G + +++ +L+ A++ LG Q+H +K +E +V VG++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 321 LDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQ-KSGLGFN 379
+DMYAKC + DA + F + S+NA+I G+ Q A L L++ K+ + +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 380 EITLSGAFSAC--AVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHV 437
T + + + L+ QVH +K L I + N+++ Y C V +A V
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLK--QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 438 FDEME-RRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQA 496
FD + +D +SWN++IA +++ +E FI M +E D +TY +L AC+G++
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 497 LNYGMQIHSRIIKSGMGSNLFVGSALIDMYCK--CGMVEEAKKILKRTEERDVVSWNAII 554
+G +H +IK G+ +ALI MY + G +E+A + + + +D++SWN+II
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380
Query: 555 SGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQ 614
+GF+ SEDA KFFSY+ +K DD+ ++ LL +C +LAT+ LG Q+HA K
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV 440
Query: 615 SDVYISSTLVDMYSKCGNVQDSRIMFEK-SPKRDFVTWNAMICGYAHHGLGEEALKVFEN 673
S+ ++ S+L+ MYSKCG ++ +R F++ S K V WNAMI GYA HGLG+ +L +F
Sbjct: 441 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQ 500
Query: 674 MELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSG 733
M +NVK +H TF ++L AC+H GL+++GL N+M Y + P++EHY+ VD+LGR+G
Sbjct: 501 MCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAG 560
Query: 734 QLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSN 793
+NKA +LI+ MP D ++ +T L +C+ G +E+A + A+ LL+++P+D TY+ LS+
Sbjct: 561 LVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSH 620
Query: 794 IYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGL 853
+Y+D W++ + +++M++ V+K PG SWI + ++V F D+ +P C++IY +
Sbjct: 621 MYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKD 680
Query: 854 LIGEMKW 860
L EM+W
Sbjct: 681 LTQEMQW 687
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 292/545 (53%), Gaps = 16/545 (2%)
Query: 111 DVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMG 170
D+ N ++ Y G +G A LF+ MP+RD +SWN+++SGY G A +F M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 171 RLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLD 230
R VD SF+ LK + ++ D G Q+H +K G++ +V GS+LVDMYAKC++++
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 231 DSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQ-KIGVGISQSTYASILRSC 289
D+ F +SE N VSWN +IAG VQ A L +M+ K V + T+A +L
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 290 AALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC-GLQSY 348
L Q+HA LK + ++ + A + YA C ++SDA++VF+ L L S+
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 349 NAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIK 408
N++I G++++ A +LF +Q+ + + T +G SAC+ + G +HG+ IK
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 409 SNLWSNICVANSILDMY-----GKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEE 463
L N+++ MY G +D A +F+ ++ +D +SWN+II AQ G E
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMED---ALSLFESLKSKDLISWNSIITGFAQKGLSE 390
Query: 464 ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALI 523
+ + +F + + ++ D++ + ++L++C+ L G QIH+ KSG SN FV S+LI
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 524 DMYCKCGMVEEAKKILKR-TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDD 582
MY KCG++E A+K ++ + + V+WNA+I G++ + + FS M VK D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 583 FTYATLLDTCGNLATVGLGMQ---LHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIM 639
T+ +L C + + G++ L + K + + + Y ++ VD+ + G V ++ +
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA--VDLLGRAGLVNKAKEL 568
Query: 640 FEKSP 644
E P
Sbjct: 569 IESMP 573
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 274/555 (49%), Gaps = 53/555 (9%)
Query: 48 TFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKM 107
+FSR+ + + + + G+Q H +I G++ ++V + L+ +Y KC ++ A + F ++
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 108 PQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFV 167
+ + VSWNALI G+ ++ A L M + ++ ++ G F+
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDA--------GTFAP------ 208
Query: 168 EMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCK 227
L ++D+ F C++L+ Q+H +K+G ++ +A++ YA C
Sbjct: 209 ----LLTLLDDPMF------CNLLK------QVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 228 KLDDSVSLFNRM-SERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASIL 286
+ D+ +F+ + ++ +SWN++IAG ++ A +LF MQ+ V TY +L
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 287 RSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAK--CNNMSDAQKVFNSLPNCG 344
+C+ + G LH +K E A + MY + M DA +F SL +
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 345 LQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHG 404
L S+N+II G+AQ G +A++ F L+ S + ++ S +C+ +A G Q+H
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Query: 405 LAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEM-ERRDAVSWNAIIAVQAQNGNEE 463
LA KS SN V +S++ MY KC + A F ++ + V+WNA+I AQ+G +
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 464 ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRI-----IKSGMGSNLFV 518
+L F M + ++ D T+ ++L AC+ + G+++ + + I+ M
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY--- 549
Query: 519 GSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRS----EDAHKFFSYML 574
+A +D+ + G+V +AK+++ E + ++ F G R+ E A + +++L
Sbjct: 550 -AAAVDLLGRAGLVNKAKELI---ESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 605
Query: 575 KMGVKPDD-FTYATL 588
+ ++P+D FTY +L
Sbjct: 606 E--IEPEDHFTYVSL 618
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/694 (35%), Positives = 394/694 (56%), Gaps = 5/694 (0%)
Query: 197 GVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQ 256
G +H ++ G + + LV+ YAKC KL + S+FN + ++ VSWN++I G Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 257 NYKFIEA---LKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMD 313
N + ++LF+ M+ + + T A I ++ ++L + +G Q HA +K D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 314 VIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLL-- 371
+ V T+ + MY K + D KVF +P +++ ++ GYA G+ EA+++F L
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 372 QKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDV 431
+K ++ + S+ A G Q+H + IK+ L + ++N+++ MY KC+ +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 432 IEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKAC 491
EAC +FD R++++W+A++ +QNG E + F M A ++P E+T VL AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 492 AGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWN 551
+ L G Q+HS ++K G +LF +AL+DMY K G + +A+K +ERDV W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 552 AIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQ 611
++ISG+ +E+A + M G+ P+D T A++L C +LAT+ LG Q+H IK
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 612 EMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVF 671
+V I S L MYSKCG+++D ++F ++P +D V+WNAMI G +H+G G+EAL++F
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 672 ENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGR 731
E M E ++P+ TF++++ AC+H G VE+G YFN+M L P+++HY+CMVD+L R
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 732 SGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILL 791
+GQL +A + I+ + +WR LLS CK HG E+ A L+ L ++SSTY+ L
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQL 632
Query: 792 SNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKL 851
S IY G + + MR N V KE GCSWI + ++ H F+V D HP EE + +
Sbjct: 633 SGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLV 692
Query: 852 GLLIGEMKWRGCASDVNYEKVEEHESQDGSSSCI 885
L+ +M G + ++ VEE E S+S I
Sbjct: 693 CLVSRQMIEEGFVTVLDSSFVEEEEGTQLSTSFI 726
Score = 306 bits (783), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 318/625 (50%), Gaps = 45/625 (7%)
Query: 50 SRIFQELTHDQAQN---PGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDK 106
S + ++LTH Q G+ H ++I +G I +N L+ Y KC L A +F+
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 107 MPQRDVVSWNALIFGYAVRGEMGIART---LFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
+ +DVVSWN+LI GY+ G + + T LF M +D+ L + Y L G F
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI-----LPNAYTLAGIF---- 125
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
KA S L+ G Q H +KM D+ ++LV MY
Sbjct: 126 ----------------------KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMY 163
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTY- 282
K ++D + +F M ERN +W+T+++G + EA+K+F + + S S Y
Sbjct: 164 CKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV 223
Query: 283 -ASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
++L S AA + LG Q+H +K V + A + MY+KC ++++A K+F+S
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG 283
Query: 342 NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ 401
+ +++A++ GY+QNG+ +EA++LF + +G+ +E T+ G +AC+ I EG Q
Sbjct: 284 DRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ 343
Query: 402 VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGN 461
+H +K ++ +++DMY K + +A FD ++ RD W ++I+ QN +
Sbjct: 344 LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD 403
Query: 462 EEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSA 521
EE L + M A + P++ T SVLKAC+ L G Q+H IK G G + +GSA
Sbjct: 404 NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 463
Query: 522 LIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPD 581
L MY KCG +E+ + +RT +DVVSWNA+ISG S + ++A + F ML G++PD
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Query: 582 DFTYATLLDTCGNLATVGLG---MQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRI 638
D T+ ++ C + V G + + I + + D Y + +VD+ S+ G +++++
Sbjct: 524 DVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY--ACMVDLLSRAGQLKEAKE 581
Query: 639 MFEKSP-KRDFVTWNAMICGYAHHG 662
E + W ++ +HG
Sbjct: 582 FIESANIDHGLCLWRILLSACKNHG 606
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 265/517 (51%), Gaps = 37/517 (7%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P T + IF+ + Q+ G+QAHA ++ I+V L+ +Y K ++ LKV
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV 175
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEA-MPERDVISWNSLLSGYLLVGDFSK- 161
F MP+R+ +W+ ++ GYA RG + A +F + E++ S S Y+ S
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGS----DSDYVFTAVLSSL 231
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
A ++V +GR Q+HC +K G V +ALV
Sbjct: 232 AATIYVGLGR---------------------------QIHCITIKNGLLGFVALSNALVT 264
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
MY+KC+ L+++ +F+ +RN ++W+ ++ G QN + +EA+KLF M G+ S+ T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
+L +C+ + L+ G QLH+ LK FE + TA +DMYAK ++DA+K F+ L
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 342 NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ 401
+ + ++I GY QN EAL L+R ++ +G+ N+ T++ AC+ +A G Q
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 402 VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGN 461
VHG IK + + +++ MY KC + + VF +D VSWNA+I+ + NG
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 462 EEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVG-- 519
+E L F ML MEPD+ T+ +++ AC+ + + G + ++ +G + V
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHY 563
Query: 520 SALIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIIS 555
+ ++D+ + G ++EAK+ ++ + + W ++S
Sbjct: 564 ACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/687 (34%), Positives = 388/687 (56%), Gaps = 3/687 (0%)
Query: 182 AVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSE 241
A+ L+ CS L++ Q+ K G ++ + LV ++ + +D++ +F +
Sbjct: 41 ALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 242 RNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQL 301
+ V ++T++ G + +AL+ F M+ V + +L+ C + L++G ++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 302 HAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQG 361
H +K+ F +D+ T +MYAKC +++A+KVF+ +P L S+N I+ GY+QNG
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 362 VEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSI 421
AL++ + + + L + IT+ A + + G ++HG A++S S + ++ ++
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 422 LDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDE 481
+DMY KC + A +FD M R+ VSWN++I QN N +E + F ML ++P +
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 482 FTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKR 541
+ L ACA L G IH ++ G+ N+ V ++LI MYCKC V+ A + +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 542 TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLG 601
+ R +VSWNA+I GF+ R DA +FS M VKPD FTY +++ L+
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 602 MQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHH 661
+H +++ + +V++++ LVDMY+KCG + +R++F+ +R TWNAMI GY H
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 517
Query: 662 GLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEH 721
G G+ AL++FE M+ +KPN TF+SV+ AC+H GLVE GL F +M +YS+ ++H
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
Query: 722 YSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLD 781
Y MVD+LGR+G+LN+A I +MP + ++ +L C+IH NV AE+AA L +L+
Sbjct: 578 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637
Query: 782 PQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDH 841
P D ++LL+NIY A MW+K+ R M + +RK PGCS + + ++VH+F H
Sbjct: 638 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 697
Query: 842 PKCEEIYEKLGLLIGEMKWRGCASDVN 868
P ++IY L LI +K G D N
Sbjct: 698 PDSKKIYAFLEKLICHIKEAGYVPDTN 724
Score = 293 bits (749), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 322/616 (52%), Gaps = 14/616 (2%)
Query: 50 SRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK----VFD 105
S++ Q T Q NP + L + P + L +CS+LK + VF
Sbjct: 3 SQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFK 62
Query: 106 KMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDV 165
++ L+ + G + A +FE + + + ++++L G+ V D KA+
Sbjct: 63 NGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQF 122
Query: 166 FVEM--GRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
FV M + +V N F LK C + G ++H +K GF D+ + L +MY
Sbjct: 123 FVRMRYDDVEPVVYN--FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMY 180
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
AKC++++++ +F+RM ER+ VSWNT++AG QN AL++ K M + + S T
Sbjct: 181 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S+L + +AL + +G ++H +A+++ F+ V + TA +DMYAKC ++ A+++F+ +
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
+ S+N++I Y QN EA+ +F+ + G+ ++++ GA ACA + G +H
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 404 GLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEE 463
L+++ L N+ V NS++ MY KC++V A +F +++ R VSWNA+I AQNG
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 464 ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALI 523
+ L YF M ++PD FTY SV+ A A ++ IH +++S + N+FV +AL+
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 524 DMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDF 583
DMY KCG + A+ I ER V +WNA+I G+ + A + F M K +KP+
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 584 TYATLLDTCGNLATVGLGMQLHAQIIKQ---EMQSDVYISSTLVDMYSKCGNVQDSRIMF 640
T+ +++ C + V G++ + + E+ D Y +VD+ + G + ++
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY--GAMVDLLGRAGRLNEAWDFI 598
Query: 641 EKSPKRDFV-TWNAMI 655
+ P + V + AM+
Sbjct: 599 MQMPVKPAVNVYGAML 614
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 266/551 (48%), Gaps = 37/551 (6%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
+P F+ + + + GK+ H L+ SGF +F L +Y KC + A
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
KVFD+MP+RD+VSWN ++ GY+ G +A + ++M E + L F
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN------------LKPSFIT 238
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
+ V L A S L G ++H +AM+ GFD V +ALVD
Sbjct: 239 IVSV-------------------LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
MYAKC L+ + LF+ M ERN VSWN++I VQN EA+ +F+ M GV + +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
L +CA L +L+ G +H +++ + +V V + + MY KC + A +F L
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 342 NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ 401
+ L S+NA+I+G+AQNG+ ++AL F ++ + + T +A A ++
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 402 VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGN 461
+HG+ ++S L N+ V +++DMY KC ++ A +FD M R +WNA+I +G
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 462 EEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVG-- 519
+ L F M ++P+ T+ SV+ AC+ + G++ ++K L +
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHY 578
Query: 520 SALIDMYCKCGMVEEAKKILKRTEERDVVS-WNAIISGFSGAKRSEDAHKFFSYMLKMGV 578
A++D+ + G + EA + + + V+ + A++ K A K + ++
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL-- 636
Query: 579 KPDDFTYATLL 589
PDD Y LL
Sbjct: 637 NPDDGGYHVLL 647
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%)
Query: 41 TTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSA 100
T KP T T+ + + + K H ++ S +FV+ L+ +Y KC + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 101 LKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAM 138
+FD M +R V +WNA+I GY G A LFE M
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/811 (31%), Positives = 436/811 (53%), Gaps = 43/811 (5%)
Query: 48 TFSRIFQELTHDQAQNPGKQAHARLIVSGFK--PTI---FVSNCLIQLYIKCSNLKSALK 102
F+ + + +A + G+Q H+R+ FK P+ F++ L+ +Y KC +L A K
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRI----FKTFPSFELDFLAGKLVFMYGKCGSLDDAEK 137
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
VFD+MP R +WN +I Y GE A L+ WN + G
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEG---------- 177
Query: 163 IDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDM 222
V +G LS SF LKAC+ L D G +LH +K+G+ +ALV M
Sbjct: 178 ----VPLG-LS------SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSM 226
Query: 223 YAKCKKLDDSVSLFNRMSER-NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
YAK L + LF+ E+ + V WN++++ + K +E L+LF+ M G + T
Sbjct: 227 YAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYT 286
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTD-FEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
S L +C S KLG ++HA LK+ ++ V A + MY +C M A+++ +
Sbjct: 287 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
N + ++N++I GY QN EAL+ F + +G +E++++ +A ++ L G+
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
++H IK SN+ V N+++DMY KC F M +D +SW +IA AQN
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGS 520
E L F + ME DE GS+L+A + +++ +IH I++ G+ + + +
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQN 525
Query: 521 ALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
L+D+Y KC + A ++ + + +DVVSW ++IS + +A + F M++ G+
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 581 DDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMF 640
D +L +L+ + G ++H ++++ + I+ +VDMY+ CG++Q ++ +F
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVF 645
Query: 641 EKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVE 700
++ ++ + + +MI Y HG G+ A+++F+ M ENV P+H +F+++L AC+H GL++
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Query: 701 KGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSI 760
+G + +M +Y L P EHY C+VD+LGR+ + +A + ++ M E +W LL+
Sbjct: 706 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Query: 761 CKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEP 820
C+ H E+ E AA LL+L+P++ +L+SN++A+ G W+ + R M+ + + K P
Sbjct: 766 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Query: 821 GCSWIGVNDKVHTFLVRDKDHPKCEEIYEKL 851
GCSWI ++ KVH F RDK HP+ +EIYEKL
Sbjct: 826 GCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/734 (33%), Positives = 405/734 (55%), Gaps = 15/734 (2%)
Query: 147 NSLLSGYLLVGDFSKAIDVFVEMGRLSGM--VDNRSFAVALKACSILEDGDFGVQLHCFA 204
+ L+ +L GD A+ M R G+ +D+ +F+ LK+C D G +H
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMAR-DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARL 88
Query: 205 MKMGFDKDVVTGSALVDMYAKC---KKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFI 261
++ + D V ++L+ +Y+K K +D R +R+ VSW+ ++A N + +
Sbjct: 89 IEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 262 EALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKT-DFEMDVIVGTAT 320
+A+K+F ++G+ + Y +++R+C+ + +G +KT FE DV VG +
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 321 LDMYAKC-NNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFN 379
+DM+ K N+ +A KVF+ + + ++ +I Q G EA++ F + SG +
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 380 EITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQ--DVIEACH- 436
+ TLS FSACA + G Q+H AI+S L + V S++DMY KC ++ C
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRK 326
Query: 437 VFDEMERRDAVSWNAIIAVQAQNGN-EEETLFYFISML-HAIMEPDEFTYGSVLKACAGQ 494
VFD ME +SW A+I +N N E + F M+ +EP+ FT+ S KAC
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 495 QALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAII 554
G Q+ + K G+ SN V +++I M+ K +E+A++ + E+++VS+N +
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL 446
Query: 555 SGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQ 614
G E A K S + + + FT+A+LL N+ ++ G Q+H+Q++K +
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 615 SDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM 674
+ + + L+ MYSKCG++ + +F R+ ++W +MI G+A HG L+ F M
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 675 ELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQ 734
E VKPN T++++L AC+H+GLV +G +FN M D+ + P++EHY+CMVD+L R+G
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 735 LNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNI 794
L A + I MPF+AD ++WRT L C++H N E+ + AA +L+LDP + + YI LSNI
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNI 686
Query: 795 YADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLL 854
YA AG W++ + RR M++ + KE GCSWI V DK+H F V D HP +IY++L L
Sbjct: 687 YACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
Query: 855 IGEMKWRGCASDVN 868
I E+K G D +
Sbjct: 747 ITEIKRCGYVPDTD 760
Score = 270 bits (691), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 196/664 (29%), Positives = 327/664 (49%), Gaps = 50/664 (7%)
Query: 46 TITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFD 105
++TFS + + + GK HARLI +P + N LI LY K + A VF+
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 106 KMPQ---RDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
M + RDVVSW+A++ Y G E D A
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGR------------ELD-------------------A 150
Query: 163 IDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMG-FDKDVVTGSALVD 221
I VFVE L + ++ + ++ACS + G F MK G F+ DV G +L+D
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 222 MYAKCKK-LDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
M+ K + +++ +F++MSE N V+W +I C+Q EA++ F M G +
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCN---NMSDAQKVF 337
T +S+ +CA L NL LG QLH+ A+++ D V + +DMYAKC+ ++ D +KVF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 338 NSLPNCGLQSYNAIIVGYAQN-GQGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAG 395
+ + + + S+ A+I GY +N EA+ LF ++ + + N T S AF AC ++
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 396 YLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAV 455
G QV G A K L SN VANS++ M+ K + +A F+ + ++ VS+N +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 456 QAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSN 515
+N N E+ + + FT+ S+L A ++ G QIHS+++K G+ N
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 516 LFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLK 575
V +ALI MY KCG ++ A ++ E R+V+SW ++I+GF+ + + F+ M++
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 576 MGVKPDDFTYATLLDTCGNLATVGLGMQ-LHAQIIKQEMQSDVYISSTLVDMYSKCGNVQ 634
GVKP++ TY +L C ++ V G + ++ +++ + + +VD+ + G +
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 635 DSRIMFEKSP-KRDFVTWNAMICGYAHHG---LGEEALKVFENMELENVKPNHATFISVL 690
D+ P + D + W + H LG+ A + +EL+ +P +S +
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKI--LELDPNEPAAYIQLSNI 686
Query: 691 RACA 694
ACA
Sbjct: 687 YACA 690
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 42/305 (13%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+P TFS F+ + GKQ + G V+N +I +++K ++ A +
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDV----ISWNSLLSGYLLVGD 158
F+ + ++++VS+N + G A L + ER++ ++ SLLSG VG
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGS 489
Query: 159 FSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSA 218
K G Q+H +K+G + +A
Sbjct: 490 IRK-----------------------------------GEQIHSQVVKLGLSCNQPVCNA 514
Query: 219 LVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGIS 278
L+ MY+KC +D + +FN M RN +SW ++I G ++ I L+ F M + GV +
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 279 QSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVG--TATLDMYAKCNNMSDAQKV 336
+ TY +IL +C+ + + G + H +++ D ++ + +D+ + ++DA +
Sbjct: 575 EVTYVAILSACSHVGLVSEGWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 337 FNSLP 341
N++P
Sbjct: 634 INTMP 638
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 293/891 (32%), Positives = 444/891 (49%), Gaps = 109/891 (12%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
GK HAR++ P F+ N LI +Y KC +L A +VFDKMP RD+VSWN+++ YA
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
E + ++ +LL + + V+ LS M
Sbjct: 118 SSECVV----------------ENIQQAFLLFRILRQDV-VYTSRMTLSPM--------- 151
Query: 185 LKACSILEDGDF--GVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSER 242
LK C L G H +A K+G D D ALV++Y K K+ + LF M R
Sbjct: 152 LKLC--LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
Query: 243 NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILR--------------- 287
+ V WN ++ ++ EA+ L G+ ++ T + R
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFA 269
Query: 288 --------SCAALSNLKLGTQLH-----------AHALKTDFEMDVIVGTATLDMYAKCN 328
S N L LH A +++D E D + L K +
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329
Query: 329 NMSDAQKVF---------------NSLPN--CGLQ------------------SYNAIIV 353
+++ Q+V NSL N C L+ S+N++I
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 354 GYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL----QVHGLAIKS 409
G AQNG VEA+ LF L + GL ++ T++ A + + EGL QVH AIK
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSLSKQVHVHAIKI 446
Query: 410 NLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYF 469
N S+ V+ +++D Y + + + EA +F E D V+WNA++A Q+ + +TL F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 470 ISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKC 529
M D+FT +V K C A+N G Q+H+ IKSG +L+V S ++DMY KC
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 530 GMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLL 589
G + A+ D V+W +ISG E A FS M MGV PD+FT ATL
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625
Query: 590 DTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFV 649
L + G Q+HA +K +D ++ ++LVDMY+KCG++ D+ +F++ +
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 650 TWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVM 709
WNAM+ G A HG G+E L++F+ M+ +KP+ TFI VL AC+H GLV + + M
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Query: 710 LSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEV 769
DY + P++EHYSC+ D LGR+G + +A LI+ M EA ++RTLL+ C++ G+ E
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 770 AEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVND 829
+ A+ LL+L+P DSS Y+LLSN+YA A WD++ R +M+ +KV+K+PG SWI V +
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Query: 830 KVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASDVNYE--KVEEHESQ 878
K+H F+V D+ + + E IY K+ +I ++K G + ++ VEE E +
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKE 916
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 237/485 (48%), Gaps = 51/485 (10%)
Query: 286 LRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGL 345
LR+ S+L LG HA L + + + + MY+KC +++ A++VF+ +P+ L
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 346 QSYNAIIVGYAQNGQGV-----EALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
S+N+I+ YAQ+ + V +A LFR+L++ + + +TLS C + +GY+
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC-LHSGYVWAS 164
Query: 401 Q-VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
+ HG A K L + VA +++++Y K V E +F+EM RD V WN ++ +
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVG 519
G +EE + + + + P+E T +++ +RI SG S+
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEIT-----------------LRLLARI--SGDDSD---- 261
Query: 520 SALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK 579
G V+ + +++ N +S + + + K F+ M++ V+
Sbjct: 262 ---------AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 580 PDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIM 639
D T+ +L T + ++ LG Q+H +K + + +S++L++MY K +R +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 640 FEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHI--G 697
F+ +RD ++WN++I G A +GL EA+ +F + +KP+ T SVL+A + + G
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 698 L-VEKGLHYFNVMLSDYSLHPQLEHY--SCMVDILGRSGQLNKALKLIQEMPFEADDVIW 754
L + K +H + +++ S + + + ++D R+ + +A L + F D V W
Sbjct: 433 LSLSKQVHVHAIKINNVS-----DSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAW 485
Query: 755 RTLLS 759
+++
Sbjct: 486 NAMMA 490
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 31/248 (12%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+ T + +F+ A N GKQ HA I SG+ ++VS+ ++ +Y+KC ++ +A
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
FD +P D V+W +I SG + G+ +A
Sbjct: 574 AFDSIPVPDDVAWTTMI-------------------------------SGCIENGEEERA 602
Query: 163 IDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDM 222
VF +M + + D + A KA S L + G Q+H A+K+ D G++LVDM
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Query: 223 YAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTY 282
YAKC +DD+ LF R+ N +WN ++ G Q+ + E L+LFK M+ +G+ + T+
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 283 ASILRSCA 290
+L +C+
Sbjct: 723 IGVLSACS 730
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/846 (29%), Positives = 434/846 (51%), Gaps = 45/846 (5%)
Query: 33 GKTTAPAITTKPKTITF---SRIFQE-------LTHDQAQNP-----GKQAHARLIVSGF 77
K APAI K++ SR +E L NP GKQ HA LIV+
Sbjct: 7 AKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSI 66
Query: 78 KPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEA 137
+ ++ +Y C + K+F ++ R
Sbjct: 67 SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR--------------------------- 99
Query: 138 MPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFG 197
+ WNS++S ++ G ++A+ + +M D +F +KAC L++
Sbjct: 100 --RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 198 VQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQN 257
L +G D + S+L+ Y + K+D LF+R+ +++ V WN ++ G +
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 258 YKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVG 317
+K F +M+ + + T+ +L CA+ + LG QLH + + + + +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 318 TATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLG 377
+ L MY+KC DA K+F + ++N +I GY Q+G E+L F + SG+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 378 FNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHV 437
+ IT S + + Q+H ++ ++ +I + ++++D Y KC+ V A ++
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 438 FDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQAL 497
F + D V + A+I+ NG ++L F ++ + P+E T S+L AL
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 498 NYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGF 557
G ++H IIK G + +G A+IDMY KCG + A +I +R +RD+VSWN++I+
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 558 SGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDV 617
+ + A F M G+ D + + L C NL + G +H +IK + SDV
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 618 YISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM-EL 676
Y STL+DMY+KCGN++ + +F+ +++ V+WN++I +HG +++L +F M E
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 677 ENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLN 736
++P+ TF+ ++ +C H+G V++G+ +F M DY + PQ EHY+C+VD+ GR+G+L
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697
Query: 737 KALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYA 796
+A + ++ MPF D +W TLL C++H NVE+AE A+S L+ LDP +S Y+L+SN +A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757
Query: 797 DAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIG 856
+A W+ ++ R LM++ +V+K PG SWI +N + H F+ D +HP+ IY L L+G
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Query: 857 EMKWRG 862
E++ G
Sbjct: 818 ELRLEG 823
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/780 (31%), Positives = 435/780 (55%), Gaps = 13/780 (1%)
Query: 109 QRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVE 168
+ D V +I YA+ G +R +F+A+ +++ WN+++S Y + + ++ F+E
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 169 MGRLSGMV-DNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCK 227
M + ++ D+ ++ +KAC+ + D G+ +H +K G +DV G+ALV Y
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 228 KLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLF-KIMQKIGVGI---SQSTYA 283
+ D++ LF+ M ERN VSWN++I N E+ L ++M++ G G +T
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
++L CA + LG +H A+K + ++++ A +DMY+KC +++AQ +F N
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSG--LGFNEITLSGAFSACAVIAGYLEGL- 400
+ S+N ++ G++ G + R + G + +E+T+ A C +L L
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC-FHESFLPSLK 415
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
++H ++K N VAN+ + Y KC + A VF + + SWNA+I AQ+
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGS 520
+ +L + M + + PD FT S+L AC+ ++L G ++H II++ + +LFV
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 521 ALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
+++ +Y CG + + + E++ +VSWN +I+G+ + A F M+ G++
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 581 DDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMF 640
+ + C L ++ LG + HA +K ++ D +I+ +L+DMY+K G++ S +F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 641 EKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVE 700
++ +WNAMI GY HGL +EA+K+FE M+ P+ TF+ VL AC H GL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 701 KGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLI-QEMPFEADDVIWRTLLS 759
+GL Y + M S + L P L+HY+C++D+LGR+GQL+KAL+++ +EM EAD IW++LLS
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 760 ICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKE 819
C+IH N+E+ E+ A+ L +L+P+ Y+LLSN+YA G W+ + R+ M + +RK+
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 820 PGCSWIGVNDKVHTFLVRDKDHPKCEEI---YEKLGLLIGEMKWRGCASDVNYEKVEEHE 876
GCSWI +N KV +F+V ++ EEI + L + I +M +R V ++ EE +
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEK 895
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 176/637 (27%), Positives = 313/637 (49%), Gaps = 39/637 (6%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
G H ++ +G +FV N L+ Y + AL++FD MP+R++VSWN++I ++
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
G S S +LL+G+ + E G + M D +
Sbjct: 266 NG-----------------FSEES----FLLLGEMME------ENGDGAFMPDVATLVTV 298
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNW 244
L C+ + G +H +A+K+ DK++V +AL+DMY+KC + ++ +F + +N
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 245 VSWNTVIAGCVQNYKFIEALKLFKIMQKIG--VGISQSTYASILRSCAALSNLKLGTQLH 302
VSWNT++ G + + M G V + T + + C S L +LH
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 303 AHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGV 362
++LK +F + +V A + YAKC ++S AQ+VF+ + + + S+NA+I G+AQ+
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 363 EALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSIL 422
+L ++ SGL + T+ SAC+ + G +VHG I++ L ++ V S+L
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538
Query: 423 DMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEF 482
+Y C ++ +FD ME + VSWN +I QNG + L F M+ ++
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598
Query: 483 TYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRT 542
+ V AC+ +L G + H+ +K + + F+ +LIDMY K G + ++ K+
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 543 EERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGM 602
+E+ SWNA+I G+ +++A K F M + G PDD T+ +L C + + G+
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718
Query: 603 QLHAQIIKQ-EMQSDVYISSTLVDMYSKCGNVQDS-RIMFEK-SPKRDFVTWNAMICGYA 659
+ Q+ ++ ++ + ++DM + G + + R++ E+ S + D W +++
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 660 HHG---LGEE-ALKVFENMELENVKPNHATFISVLRA 692
H +GE+ A K+F ELE KP + +S L A
Sbjct: 779 IHQNLEMGEKVAAKLF---ELEPEKPENYVLLSNLYA 812
Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 237/484 (48%), Gaps = 12/484 (2%)
Query: 285 ILRSCAALSNLKLGTQLHAH-ALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
+L++ ++++G ++H + T D ++ T + MYA C + D++ VF++L +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQV 402
L +NA+I Y++N E L+ F ++ + L + T ACA ++ GL V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 403 HGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNE 462
HGL +K+ L ++ V N+++ YG V +A +FD M R+ VSWN++I V + NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 463 EETLFYFISMLH-----AIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLF 517
EE+ M+ A M PD T +VL CA ++ + G +H +K + L
Sbjct: 270 EESFLLLGEMMEENGDGAFM-PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 518 VGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMG 577
+ +AL+DMY KCG + A+ I K ++VVSWN ++ GFS + ML G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 578 --VKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQD 635
VK D+ T + C + + + +LH +KQE + +++ V Y+KCG++
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 636 SRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAH 695
++ +F + +WNA+I G+A +L M++ + P+ T S+L AC+
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 696 IGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWR 755
+ + G ++ ++ L L Y ++ + G+L L M + V W
Sbjct: 509 LKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELCTVQALFDAME-DKSLVSWN 566
Query: 756 TLLS 759
T+++
Sbjct: 567 TVIT 570
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/575 (24%), Positives = 269/575 (46%), Gaps = 40/575 (6%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P T + ++ GK H + + ++N L+ +Y KC + +A +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F ++VVSWN ++ G++ G+ F+ + + +L+G G+ KA
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGD---THGTFDVLRQ--------MLAG----GEDVKAD 394
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
+V + + + SF +LK +LHC+++K F + + +A V Y
Sbjct: 395 EVTIL--NAVPVCFHESFLPSLK------------ELHCYSLKQEFVYNELVANAFVASY 440
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
AKC L + +F+ + + SWN +I G Q+ +L M+ G+ T
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S+L +C+ L +L+LG ++H ++ E D+ V + L +Y C + Q +F+++ +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
L S+N +I GY QNG AL +FR + G+ I++ F AC+++ G + H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 404 GLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEE 463
A+K L + +A S++DMY K + ++ VF+ ++ + SWNA+I +G +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 464 ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSAL 522
E + F M PD+ T+ VL AC ++ G++ ++ S G+ NL + +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 523 IDMYCKCGMVEEAKKIL--KRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGV-K 579
IDM + G +++A +++ + +EE DV W +++S + E K + + ++ K
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
Query: 580 PDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQ 614
P+++ + L GLG + ++Q M
Sbjct: 801 PENYVLLSNL-------YAGLGKWEDVRKVRQRMN 828
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 588 LLDTCGNLATVGLGMQLHAQII-KQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKR 646
LL G + +G ++H + +++D + + ++ MY+ CG+ DSR +F+ +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 647 DFVTWNAMICGYAHHGLGEEALKVF-ENMELENVKPNHATFISVLRACAHIGLVEKGLHY 705
+ WNA+I Y+ + L +E L+ F E + ++ P+H T+ V++ACA + V GL
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 706 FNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHG 765
+++ L + + +V G G + AL+L MP E + V W +++ + +G
Sbjct: 210 HGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVFSDNG 267
Query: 766 NVE 768
E
Sbjct: 268 FSE 270
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/746 (31%), Positives = 404/746 (54%), Gaps = 3/746 (0%)
Query: 140 ERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQ 199
+R V N+ L + G+ A+ + G+ +D R+ L+ C+ + G +
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWD--IDPRTLCSVLQLCADSKSLKDGKE 115
Query: 200 LHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYK 259
+ F GF D GS L MY C L ++ +F+ + + WN ++ ++
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 260 FIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTA 319
F ++ LFK M GV + T++ + +S ++L ++ G QLH LK+ F VG +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 320 TLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFN 379
+ Y K + A+KVF+ + + S+N+II GY NG + L +F + SG+ +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 380 EITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFD 439
T+ F+ CA G VH + +K+ N++LDMY KC D+ A VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 440 EMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNY 499
EM R VS+ ++IA A+ G E + F M + PD +T +VL CA + L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 500 GMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSG 559
G ++H I ++ +G ++FV +AL+DMY KCG ++EA+ + +D++SWN II G+S
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 560 AKRSEDAHKFFSYMLK-MGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVY 618
+ +A F+ +L+ PD+ T A +L C +L+ G ++H I++ SD +
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 619 ISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELEN 678
++++LVDMY+KCG + + ++F+ +D V+W MI GY HG G+EA+ +F M
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 679 VKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKA 738
++ + +F+S+L AC+H GLV++G +FN+M + + P +EHY+C+VD+L R+G L KA
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 739 LKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADA 798
+ I+ MP D IW LL C+IH +V++AE+ A + +L+P+++ Y+L++NIYA+A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 799 GMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEM 858
W+++ R+ + Q +RK PGCSWI + +V+ F+ D +P+ E I L + M
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Query: 859 KWRGCASDVNYEKVEEHESQDGSSSC 884
G + Y ++ E + + C
Sbjct: 776 IEEGYSPLTKYALIDAEEMEKEEALC 801
Score = 282 bits (721), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 323/644 (50%), Gaps = 43/644 (6%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P+T+ + Q ++ GK+ + +GF + + L +Y C +LK A +V
Sbjct: 94 PRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
FD E+ I + LF WN L++ GDFS +I
Sbjct: 152 FD---------------------EVKIEKALF----------WNILMNELAKSGDFSGSI 180
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
+F +M +D+ +F+ K+ S L G QLH F +K GF + G++LV Y
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
K +++D + +F+ M+ER+ +SWN++I G V N + L +F M G+ I +T
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S+ CA + LG +H+ +K F + LDMY+KC ++ A+ VF + +
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
+ SY ++I GYA+ G EA++LF +++ G+ + T++ + CA EG +VH
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 404 GLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEE 463
+++L +I V+N+++DMY KC + EA VF EM +D +SWN II ++N
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 464 ETLFYFISML-HAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSAL 522
E L F +L PDE T VL ACA A + G +IH I+++G S+ V ++L
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 523 IDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDD 582
+DMY KCG + A + +D+VSW +I+G+ ++A F+ M + G++ D+
Sbjct: 541 VDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 583 FTYATLLDTCGNLATVGLGMQLHAQIIKQE--MQSDVYISSTLVDMYSKCGNVQDSRIMF 640
++ +LL C + V G + I++ E ++ V + +VDM ++ G++ +
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 641 EKSP-KRDFVTWNAMICG-YAHHG--LGEE-ALKVFENMELENV 679
E P D W A++CG HH L E+ A KVFE +E EN
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE-LEPENT 702
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/685 (35%), Positives = 375/685 (54%), Gaps = 50/685 (7%)
Query: 217 SALVDMYAKCKKLDDSVSLFNRM--SERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIG 274
S L+ Y L +VSL R S+ WN++I N + L LF +M +
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 275 VGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQ 334
T+ + ++C +S+++ G HA +L T F +V VG A + MY++C ++SDA+
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 335 KVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVI 393
KVF+ + + S+N+II YA+ G+ AL++F R+ + G + ITL CA +
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 394 AGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAII 453
+ G Q+H A+ S + N+ V N ++DMY KC + EA VF M +D VSWNA++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 454 AVQAQNGNEEETLFYF------------------IS-----------------MLHAIME 478
A +Q G E+ + F IS ML + ++
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 479 PDEFTYGSVLKACAGQQALNYGMQIHSRIIK-------SGMGSNLFVGSALIDMYCKCGM 531
P+E T SVL CA AL +G +IH IK +G G V + LIDMY KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 532 VEEAKKILKR--TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMG--VKPDDFTYAT 587
V+ A+ + +ERDVV+W +I G+S + A + S M + +P+ FT +
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 588 LLDTCGNLATVGLGMQLHAQIIK-QEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKR 646
L C +LA + +G Q+HA ++ Q+ +++S+ L+DMY+KCG++ D+R++F+ +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 647 DFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYF 706
+ VTW +++ GY HG GEEAL +F+ M K + T + VL AC+H G++++G+ YF
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 707 NVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGN 766
N M + + + P EHY+C+VD+LGR+G+LN AL+LI+EMP E V+W LS C+IHG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 767 VEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIG 826
VE+ E AA + +L +Y LLSN+YA+AG W ++ R LMR V+K PGCSW+
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 827 VNDKVHTFLVRDKDHPKCEEIYEKL 851
TF V DK HP +EIY+ L
Sbjct: 723 GIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 295/638 (46%), Gaps = 68/638 (10%)
Query: 93 KCSNLKSALKVFDKMPQRDVVSWNA---LIFGYAVRGEMGIARTLFEAMPERD--VISWN 147
KC + + K+ +++ N LI Y G + A +L P D V WN
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 148 SLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKM 207
SL+ Y G +K + +F M LS DN +F KAC + G H ++
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 208 GFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLF 267
GF +V G+ALV MY++C+ L D+ +F+ MS + VSWN++I + K AL++F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 268 -KIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAK 326
++ + G T ++L CA+L LG QLH A+ ++ ++ VG +DMYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 327 CNNMSDAQKVFNSLPNCGLQSYNAIIV--------------------------------- 353
C M +A VF+++ + S+NA++
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 354 --GYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKS-- 409
GYAQ G G EAL + R + SG+ NE+TL S CA + + G ++H AIK
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 410 NLWSN-----ICVANSILDMYGKCQDVIEACHVFDEM--ERRDAVSWNAIIAVQAQNGNE 462
+L N V N ++DMY KC+ V A +FD + + RD V+W +I +Q+G+
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 463 EETLFYFISMLH--AIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGS-NLFVG 519
+ L M P+ FT L ACA AL G QIH+ +++ + LFV
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 520 SALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK 579
+ LIDMY KCG + +A+ + ++ V+W ++++G+ E+A F M ++G K
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 580 PDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYIS------STLVDMYSKCGNV 633
D T +L C + + GM+ M++ +S + LVD+ + G +
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYF-----NRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 634 QDSRIMFEKSP-KRDFVTWNAMICGYAHHG---LGEEA 667
+ + E+ P + V W A + HG LGE A
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 266/567 (46%), Gaps = 81/567 (14%)
Query: 39 AITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLK 98
+++ P TF +F+ + G+ AHA +V+GF +FV N L+ +Y +C +L
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 99 SALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGD 158
A KV F+ M DV+SWNS++ Y +G
Sbjct: 180 DARKV-------------------------------FDEMSVWDVVSWNSIIESYAKLGK 208
Query: 159 FSKAIDVFVEMGRLSG-MVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGS 217
A+++F M G DN + L C+ L G QLHCFA+ +++ G+
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 218 ALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQK----- 272
LVDMYAKC +D++ ++F+ MS ++ VSWN ++AG Q +F +A++LF+ MQ+
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 273 ------------------------------IGVGISQSTYASILRSCAALSNLKLGTQLH 302
G+ ++ T S+L CA++ L G ++H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 303 AHALKTDFEM-------DVIVGTATLDMYAKCNNMSDAQKVFNSLP--NCGLQSYNAIIV 353
+A+K ++ + +V +DMYAKC + A+ +F+SL + ++ +I
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 354 GYAQNGQGVEALQLFRLL--QKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNL 411
GY+Q+G +AL+L + + N T+S A ACA +A G Q+H A+++
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 412 WS-NICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFI 470
+ + V+N ++DMY KC + +A VFD M ++ V+W +++ +G EE L F
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 471 SMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSALIDMYCKC 529
M + D T VL AC+ ++ GM+ +R+ G+ + L+D+ +
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 530 GMVEEAKKILKRTE-ERDVVSWNAIIS 555
G + A ++++ E V W A +S
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLS 655
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/815 (31%), Positives = 419/815 (51%), Gaps = 31/815 (3%)
Query: 52 IFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRD 111
I + L+ N ++ HA +I G + F S LI Y S+L VF ++
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS--- 66
Query: 112 VVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGR 171
P ++V WNS++ + G F +A++ + ++
Sbjct: 67 ---------------------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99
Query: 172 LSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDD 231
D +F +KAC+ L D + G ++ + MGF+ D+ G+ALVDMY++ L
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 232 SVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAA 291
+ +F+ M R+ VSWN++I+G + + EAL+++ ++ + T +S+L +
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 292 LSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAI 351
L +K G LH ALK+ V+V + MY K +DA++VF+ + SYN +
Sbjct: 220 LLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 352 IVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNL 411
I GY + E++++F L + +T+S AC + ++ +K+
Sbjct: 280 ICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 412 WSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFIS 471
V N ++D+Y KC D+I A VF+ ME +D VSWN+II+ Q+G+ E + F
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 472 MLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGM 531
M+ + D TY ++ L +G +HS IKSG+ +L V +ALIDMY KCG
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 532 VEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDT 591
V ++ KI D V+WN +IS + + M K V PD T+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 592 CGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTW 651
C +LA LG ++H +++ +S++ I + L++MYSKCG +++S +FE+ +RD VTW
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTW 578
Query: 652 NAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLS 711
MI Y +G GE+AL+ F +ME + P+ FI+++ AC+H GLV++GL F M +
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Query: 712 DYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAE 771
Y + P +EHY+C+VD+L RS +++KA + IQ MP + D IW ++L C+ G++E AE
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 772 EAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKV 831
+ +++L+P D IL SN YA WDK+S R+ ++ + K PG SWI V V
Sbjct: 699 RVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNV 758
Query: 832 HTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASD 866
H F D P+ E IY+ L +L M G D
Sbjct: 759 HVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 198/714 (27%), Positives = 335/714 (46%), Gaps = 61/714 (8%)
Query: 4 YLW--LIRFLSN----PQCKTFLIASFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELT 57
YLW +IR S P+ F + L+E K + P TF + +
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEF-------YGKLRESKVS-------PDKYTFPSVIKACA 117
Query: 58 HDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNA 117
G + +++ GF+ +FV N L+ +Y + L A +VFD+MP RD+VSWN+
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 118 LIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVD 177
LI GY+ G + +A++++ E+ + D
Sbjct: 178 LISGYSSHGY-------------------------------YEEALEIYHELKNSWIVPD 206
Query: 178 NRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFN 237
+ + + L A L G LH FA+K G + VV + LV MY K ++ D+ +F+
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 238 RMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKL 297
M R+ VS+NT+I G ++ E++++F + T +S+LR+C L +L L
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSL 325
Query: 298 GTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQ 357
++ + LK F ++ V +D+YAKC +M A+ VFNS+ S+N+II GY Q
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 358 NGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICV 417
+G +EA++LF+++ + IT S +A G +H IKS + ++ V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 418 ANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIM 477
+N+++DMY KC +V ++ +F M D V+WN +I+ + G+ L M + +
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 478 EPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKK 537
PD T+ L CA A G +IH +++ G S L +G+ALI+MY KCG +E + +
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 538 ILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLAT 597
+ +R RDVV+W +I + E A + F+ M K G+ PD + ++ C +
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 598 VGLGMQLHAQIIKQEMQSDVYIS--STLVDMYSKCGNVQDSRIMFEKSP-KRDFVTWNAM 654
V G+ + +K + D I + +VD+ S+ + + + P K D W ++
Sbjct: 626 VDEGLACFEK-MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 655 ICGYAHHGLGEEALKVFEN-MELENVKPNHATFIS----VLRACAHIGLVEKGL 703
+ G E A +V +EL P ++ S LR + L+ K L
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/663 (33%), Positives = 382/663 (57%), Gaps = 3/663 (0%)
Query: 200 LHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVS-WNTVIAGCVQNY 258
+H + +G +DVV +L+++Y CK + +F R+ V WN++++G +N
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 259 KFIEALKLFKIMQKIGVGISQS-TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVG 317
F + L++FK + + + S T+ +++++ AL LG +H +K+ + DV+V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 318 TATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLG 377
++ + MYAK N ++ +VF+ +P + S+N +I + Q+G+ +AL+LF ++ SG
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 378 FNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHV 437
N ++L+ A SAC+ + G ++H +K + V ++++DMYGKC + A V
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 438 FDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQAL 497
F +M R+ V+WN++I G+ + + M+ P + T S+L AC+ + L
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 498 NYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGF 557
+G IH +I+S + ++++V +LID+Y KCG A+ + +T++ SWN +IS +
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY 385
Query: 558 SGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDV 617
A + + M+ +GVKPD T+ ++L C LA + G Q+H I + +++D
Sbjct: 386 ISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDE 445
Query: 618 YISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELE 677
+ S L+DMYSKCGN +++ +F PK+D V+W MI Y HG EAL F+ M+
Sbjct: 446 LLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF 505
Query: 678 NVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNK 737
+KP+ T ++VL AC H GL+++GL +F+ M S Y + P +EHYSCM+DILGR+G+L +
Sbjct: 506 GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Query: 738 ALKLIQEMPFEADDV-IWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYA 796
A ++IQ+ P +D+ + TL S C +H + + A L++ P D+STY++L N+YA
Sbjct: 566 AYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYA 625
Query: 797 DAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIG 856
WD R M++ +RK+PGCSWI ++DKV F D+ H + E +YE L LL G
Sbjct: 626 SGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSG 685
Query: 857 EMK 859
M+
Sbjct: 686 HME 688
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 318/620 (51%), Gaps = 20/620 (3%)
Query: 84 SNCLIQLYIKCSNLKSALKVFDKMPQR--------DVVSWNALIFGYAVRGEMGIARTLF 135
S+ L+ L +C+N +L+ + QR DVV +LI Y + AR +F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 136 EAMPER-DVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMV-DNRSFAVALKACSILED 193
E R DV WNSL+SGY F ++VF + S V D+ +F +KA L
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 194 GDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAG 253
G +H +K G+ DVV S+LV MYAK ++S+ +F+ M ER+ SWNTVI+
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 254 CVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMD 313
Q+ + +AL+LF M+ G + + + +C+ L L+ G ++H +K FE+D
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 314 VIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQK 373
V +A +DMY KC+ + A++VF +P L ++N++I GY G +++ +
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 374 SGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIE 433
G ++ TL+ AC+ L G +HG I+S + ++I V S++D+Y KC +
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 434 ACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAG 493
A VF + ++ A SWN +I+ GN + + + M+ ++PD T+ SVL AC+
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 494 QQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAI 553
AL G QIH I +S + ++ + SAL+DMY KCG +EA +I ++DVVSW +
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 554 ISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQI-IKQE 612
IS + + +A F M K G+KPD T +L CG+ + G++ +Q+ K
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYG 542
Query: 613 MQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRD-----FVTWNAMICGYAHHGLGEEA 667
++ + S ++D+ + G + ++ + +++P+ T + C + H LG+
Sbjct: 543 IEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRI 602
Query: 668 LKVFENMELENVKPNHATFI 687
++ +EN + +T++
Sbjct: 603 ARLL----VENYPDDASTYM 618
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 252/502 (50%), Gaps = 32/502 (6%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P + TF + + + G+ H ++ SG+ + V++ L+ +Y K + +++L+V
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
FD+MP+RDV SWN +I S + G+ KA+
Sbjct: 165 FDEMPERDVASWNTVI-------------------------------SCFYQSGEAEKAL 193
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
++F M ++ S VA+ ACS L + G ++H +K GF+ D SALVDMY
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
KC L+ + +F +M ++ V+WN++I G V +++ M G SQ+T
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
SIL +C+ NL G +H + +++ D+ V + +D+Y KC + A+ VF+
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
+S+N +I Y G +A++++ + G+ + +T + AC+ +A +G Q+H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 404 GLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEE 463
+S L ++ + +++LDMY KC + EA +F+ + ++D VSW +I+ +G
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 464 ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRI-IKSGMGSNLFVGSAL 522
E L+ F M ++PD T +VL AC ++ G++ S++ K G+ + S +
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 523 IDMYCKCGMVEEAKKILKRTEE 544
ID+ + G + EA +I+++T E
Sbjct: 554 IDILGRAGRLLEAYEIIQQTPE 575
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 34/302 (11%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
T+P T + I + + GK H +I S I+V+ LI LY KC A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
VF K Q+DV SWN ++S Y+ VG++ K
Sbjct: 365 TVFSK-TQKDVAE------------------------------SWNVMISSYISVGNWFK 393
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
A++V+ +M + D +F L ACS L + G Q+H + + D + SAL+D
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
MY+KC ++ +FN + +++ VSW +I+ + + EAL F MQK G+ T
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVG--TATLDMYAKCNNMSDAQKVFNS 339
++L +C + G + + +++ + ++ I+ + +D+ + + +A ++
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQ-MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Query: 340 LP 341
P
Sbjct: 573 TP 574
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 39 AITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLK 98
++ KP +TF+ + + A GKQ H + S + + + L+ +Y KC N K
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 99 SALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAM 138
A ++F+ +P++DVVSW +I Y G+ A F+ M
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/623 (35%), Positives = 356/623 (57%), Gaps = 2/623 (0%)
Query: 235 LFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST--YASILRSCAAL 292
+F++M + VSW ++I V EAL LF M+ + +S T + +L++C
Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 293 SNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAII 352
SN+ G LHA+A+KT V VG++ LDMY + + + +VF+ +P ++ AII
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 353 VGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLW 412
G G+ E L F + +S + T + A ACA + G +H I
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 413 SNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISM 472
+ +CVANS+ MY +C ++ + +F+ M RD VSW ++I + G E + + FI M
Sbjct: 242 TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM 301
Query: 473 LHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMV 532
++ + P+E T+ S+ ACA L +G Q+H ++ G+ +L V ++++ MY CG +
Sbjct: 302 RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNL 361
Query: 533 EEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTC 592
A + + RD++SW+ II G+ A E+ K+FS+M + G KP DF A+LL
Sbjct: 362 VSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVS 421
Query: 593 GNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWN 652
GN+A + G Q+HA + ++ + + S+L++MYSKCG+++++ ++F ++ + D V+
Sbjct: 422 GNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLT 481
Query: 653 AMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSD 712
AMI GYA HG +EA+ +FE +P+ TFISVL AC H G ++ G HYFN+M
Sbjct: 482 AMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQET 541
Query: 713 YSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEE 772
Y++ P EHY CMVD+L R+G+L+ A K+I EM ++ DDV+W TLL CK G++E
Sbjct: 542 YNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRR 601
Query: 773 AASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVH 832
AA +L+LDP ++ + L+NIY+ G ++ + R+ M+ V KEPG S I + D V
Sbjct: 602 AAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVS 661
Query: 833 TFLVRDKDHPKCEEIYEKLGLLI 855
F+ D+ HP+ E+IY L L +
Sbjct: 662 AFVSGDRFHPQSEDIYNILELAV 684
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 288/572 (50%), Gaps = 12/572 (2%)
Query: 126 GEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMV--DNRSFAV 183
G + AR +F+ MP D++SW S++ Y+ + +A+ +F M + V D +V
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 184 ALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERN 243
LKAC + +G LH +A+K V GS+L+DMY + K+D S +F+ M RN
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 244 WVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHA 303
V+W +I G V ++ E L F M + T+A L++CA L +K G +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 304 HALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVE 363
H + F + V + MY +C M D +F ++ + S+ ++IV Y + GQ V+
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 364 ALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILD 423
A++ F ++ S + NE T + FSACA ++ + G Q+H + L ++ V+NS++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 424 MYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFT 483
MY C +++ A +F M RD +SW+ II Q G EE YF M + +P +F
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 484 YGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTE 543
S+L + G Q+H+ + G+ N V S+LI+MY KCG ++EA I T+
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 544 ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQ 603
D+VS A+I+G++ +S++A F LK+G +PD T+ ++L C + + LG
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG-- 531
Query: 604 LHAQIIKQE---MQSDVYISSTLVDMYSKCGNVQDSRIMF-EKSPKRDFVTWNAMICGYA 659
H + QE M+ +VD+ + G + D+ M E S K+D V W ++
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 660 HHGLGEEALKVFEN-MELENVKPNHATFISVL 690
G E + E +EL+ P AT + L
Sbjct: 592 AKGDIERGRRAAERILELD---PTCATALVTL 620
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/594 (25%), Positives = 268/594 (45%), Gaps = 67/594 (11%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P T S + + G+ HA + + +++V + L+ +Y + + + +V
Sbjct: 106 PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F +MP R+ ++W ++++G + G + + +
Sbjct: 166 FSEMPF-------------------------------RNAVTWTAIITGLVHAGRYKEGL 194
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
F EM R + D +FA+ALKAC+ L +G +H + GF + ++L MY
Sbjct: 195 TYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
+C ++ D + LF MSER+ VSW ++I + + ++A++ F M+ V ++ T+A
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFA 314
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S+ +CA+LS L G QLH + L + V + + MY+ C N+ A +F +
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
+ S++ II GY Q G G E + F +++SG + L+ S +A G QVH
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH 434
Query: 404 GLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEE 463
LA+ L N V +S+++MY KC + EA +F E +R D VS A+I A++G +
Sbjct: 435 ALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSK 494
Query: 464 ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSAL 522
E + F L PD T+ SVL AC L+ G + + ++ M +
Sbjct: 495 EAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCM 554
Query: 523 IDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDD 582
+D+ C+ G + +A+K++ +SW K DD
Sbjct: 555 VDLLCRAGRLSDAEKMINE------MSW----------------------------KKDD 580
Query: 583 FTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDS 636
+ TLL C + G + +I++ + + TL ++YS GN++++
Sbjct: 581 VVWTTLLIACKAKGDIERGRRAAERILELDPTCATAL-VTLANIYSSTGNLEEA 633
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
TKP + + + G+Q HA + G + V + LI +Y KC ++K A
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
+F + + D+VS A+I GYA G+ +
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKS-------------------------------KE 495
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAM-----KMGFDKDVVTG 216
AID+F + ++ D+ +F L AC+ G + H F M M K+
Sbjct: 496 AIDLFEKSLKVGFRPDSVTFISVLTACT--HSGQLDLGFHYFNMMQETYNMRPAKEHY-- 551
Query: 217 SALVDMYAKCKKLDDSVSLFNRMS-ERNWVSWNTVIAGC 254
+VD+ + +L D+ + N MS +++ V W T++ C
Sbjct: 552 GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/731 (32%), Positives = 394/731 (53%), Gaps = 10/731 (1%)
Query: 150 LSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGF 209
L G G +A+ + M L VD F ++ C + G +++ A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 210 DKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKI 269
V G+A + M+ + L D+ +F +MSERN SWN ++ G + F EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 270 MQKIG-VGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCN 328
M +G V T+ +LR+C + +L G ++H H ++ +E+D+ V A + MY KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 329 NMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFS 388
++ A+ +F+ +P + S+NA+I GY +NG E L+LF ++ + + +TL+ S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 389 ACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVS 448
AC ++ G +H I + +I V NS+ MY EA +F MER+D VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 449 WNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRII 508
W +I+ N ++ + + M ++PDE T +VL ACA L+ G+++H I
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 509 KSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHK 568
K+ + S + V + LI+MY KC +++A I ++V+SW +II+G R +A
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 569 FFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYS 628
F M KM ++P+ T L C + + G ++HA +++ + D ++ + L+DMY
Sbjct: 486 FLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 629 KCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFIS 688
+CG + + F S K+D +WN ++ GY+ G G +++F+ M V+P+ TFIS
Sbjct: 545 RCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFIS 603
Query: 689 VLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFE 748
+L C+ +V +GL YF+ M DY + P L+HY+C+VD+LGR+G+L +A K IQ+MP
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 749 ADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTR 808
D +W LL+ C+IH +++ E +A + +LD + YILL N+YAD G W +++ R
Sbjct: 663 PDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVR 722
Query: 809 RLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASDVN 868
R+M++N + + GCSW+ V KVH FL DK HP+ +EI L +M S+V
Sbjct: 723 RMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM------SEVG 776
Query: 869 YEKVEEHESQD 879
K+ E S D
Sbjct: 777 LTKISESSSMD 787
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 304/563 (53%), Gaps = 8/563 (1%)
Query: 116 NALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGM 175
NA + + G + A +F M ER++ SWN L+ GY G F +A+ ++ M + G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 176 -VDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVS 234
D +F L+ C + D G ++H ++ G++ D+ +AL+ MY KC + +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 235 LFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSN 294
LF+RM R+ +SWN +I+G +N E L+LF M+ + V T S++ +C L +
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 295 LKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVG 354
+LG +HA+ + T F +D+ V + MY + +A+K+F+ + + S+ +I G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 355 YAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSN 414
Y N +A+ +R++ + + +EIT++ SACA + G+++H LAIK+ L S
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 415 ICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLH 474
+ VAN++++MY KC+ + +A +F + R++ +SW +IIA N E L F+ +
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FLRQMK 491
Query: 475 AIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEE 534
++P+ T + L ACA AL G +IH+ ++++G+G + F+ +AL+DMY +CG +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 535 AKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGN 594
A ++++DV SWN +++G+S + + F M+K V+PD+ T+ +LL C
Sbjct: 552 AWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 595 LATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSP-KRDFVTWNA 653
V G+ +++ + ++ + +VD+ + G +Q++ +K P D W A
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 654 MI--CGYAHH-GLGE-EALKVFE 672
++ C H LGE A +FE
Sbjct: 671 LLNACRIHHKIDLGELSAQHIFE 693
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/594 (27%), Positives = 279/594 (46%), Gaps = 68/594 (11%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
KP TF + + GK+ H ++ G++ I V N LI +Y+KC ++KS
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS-- 249
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
AR LF+ MP RD+ISWN+++SGY G +
Sbjct: 250 -----------------------------ARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
+++F M LS D + + AC +L D G +H + + GF D+ ++L
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
MY ++ LF+RM ++ VSW T+I+G N+ +A+ +++M + V + T
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
A++L +CA L +L G +LH A+K VIV ++MY+KC + A +F+++P
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 342 NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ 401
+ S+ +II G N + EAL R + K L N ITL+ A +ACA I + G +
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKE 519
Query: 402 VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGN 461
+H +++ + + + N++LDMY +C + A F+ +++D SWN ++ ++ G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQ 578
Query: 462 EEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSA 521
+ F M+ + + PDE T+ S+L C+ Q + G+ S++ G+ NL +
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYAC 638
Query: 522 LIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPD 581
++D+ + G ++E AHKF KM V PD
Sbjct: 639 VVDLLGRAGELQE-------------------------------AHKFIQ---KMPVTPD 664
Query: 582 DFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQD 635
+ LL+ C + LG +L AQ I + + V L ++Y+ CG ++
Sbjct: 665 PAVWGALLNACRIHHKIDLG-ELSAQHIFELDKKSVGYYILLCNLYADCGKWRE 717
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 127/301 (42%), Gaps = 33/301 (10%)
Query: 41 TTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSA 100
+ KP IT + + + G + H I + + V+N LI +Y KC + A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 101 LKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFS 160
L +F +P+++V+SW ++I G + + FEA+
Sbjct: 453 LDIFHNIPRKNVISWTSIIAG------LRLNNRCFEAL---------------------- 484
Query: 161 KAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
+F+ +++ + + AL AC+ + G ++H ++ G D +AL+
Sbjct: 485 ----IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALL 540
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
DMY +C +++ + S FN +++ SWN ++ G + + ++LF M K V +
Sbjct: 541 DMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
T+ S+L C+ ++ G + ++ +D+ + + +A K +
Sbjct: 600 TFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
Query: 341 P 341
P
Sbjct: 660 P 660
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/663 (33%), Positives = 366/663 (55%), Gaps = 5/663 (0%)
Query: 211 KDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIM 270
K+ V+ + ++ + K + + LF+ M +R V+W ++ +N F EA KLF+ M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 271 QKIGVGI--SQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMD--VIVGTATLDMYAK 326
+ T+ ++L C Q+HA A+K F+ + + V L Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 327 CNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGA 386
+ A +F +P ++N +I GY ++G E++ LF +++SG ++ T SG
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 387 FSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDA 446
A + + G Q+H L++ + + V N ILD Y K V+E +FDEM D
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 447 VSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSR 506
VS+N +I+ +Q E +L +F M + F + ++L A +L G Q+H +
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 507 IIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDA 566
+ + S L VG++L+DMY KC M EEA+ I K +R VSW A+ISG+
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 567 HKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDM 626
K F+ M ++ D T+AT+L + A++ LG QLHA II+ +V+ S LVDM
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 627 YSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATF 686
Y+KCG+++D+ +FE+ P R+ V+WNA+I +A +G GE A+ F M ++P+ +
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 687 ISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMP 746
+ VL AC+H G VE+G YF M Y + P+ +HY+CM+D+LGR+G+ +A KL+ EMP
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 747 FEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDP-QDSSTYILLSNIYADAGMWDKLS 805
FE D+++W ++L+ C+IH N +AE AA L ++ +D++ Y+ +SNIYA AG W+K+
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 806 YTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCAS 865
++ MR+ ++K P SW+ VN K+H F D+ HP +EI K+ L E++ G
Sbjct: 677 DVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKP 736
Query: 866 DVN 868
D +
Sbjct: 737 DTS 739
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 335/642 (52%), Gaps = 18/642 (2%)
Query: 50 SRIFQELTHDQAQNPG-----KQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVF 104
SR L + +P ++ AR+I +GF SN +++ ++ + +A KV+
Sbjct: 12 SRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVY 71
Query: 105 DKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAID 164
D+MP ++ VS N +I G+ G++ AR LF+AMP+R V++W L+ Y F +A
Sbjct: 72 DEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFK 131
Query: 165 VFVEMGRLSG--MVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKD--VVTGSALV 220
+F +M R S + D+ +F L C+ + Q+H FA+K+GFD + + + L+
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
Y + ++LD + LF + E++ V++NT+I G ++ + E++ LF M++ G S
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF 251
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
T++ +L++ L + LG QLHA ++ T F D VG LD Y+K + + + + +F+ +
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
P SYN +I Y+Q Q +L FR +Q G + S A ++ G
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
Q+H A+ + S + V NS++DMY KC+ EA +F + +R VSW A+I+ Q G
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG 431
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGS 520
L F M + + D+ T+ +VLKA A +L G Q+H+ II+SG N+F GS
Sbjct: 432 LHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGS 491
Query: 521 ALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
L+DMY KCG +++A ++ + +R+ VSWNA+IS + E A F+ M++ G++P
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 581 DDFTYATLLDTCGNLATVGLG---MQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSR 637
D + +L C + V G Q + I + Y + ++D+ + G ++
Sbjct: 552 DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY--ACMLDLLGRNGRFAEAE 609
Query: 638 IMFEKSP-KRDFVTWNAMICG---YAHHGLGEEALKVFENME 675
+ ++ P + D + W++++ + + L E A + +ME
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 263/522 (50%), Gaps = 41/522 (7%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGF--KPTIFVSNCLIQLYIKCSNLKS 99
T P +TF+ + QN Q HA + GF P + VSN L++ Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD- 201
Query: 100 ALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDF 159
+A LFE +PE+D +++N+L++GY G +
Sbjct: 202 ------------------------------LACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 160 SKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSAL 219
+++I +F++M + + +F+ LKA L D G QLH ++ GF +D G+ +
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI 291
Query: 220 VDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQ 279
+D Y+K ++ ++ LF+ M E ++VS+N VI+ Q ++ +L F+ MQ +G
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN 351
Query: 280 STYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNS 339
+A++L A LS+L++G QLH AL + + VG + +DMYAKC +A+ +F S
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 340 LPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEG 399
LP S+ A+I GY Q G L+LF ++ S L ++ T + A A A L G
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 400 LQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
Q+H I+S N+ + ++DMY KC + +A VF+EM R+AVSWNA+I+ A N
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAG----QQALNYGMQIHSRIIKSGMGSN 515
G+ E + F M+ + ++PD + VL AC+ +Q Y Q S I G+
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY-FQAMSPIY--GITPK 588
Query: 516 LFVGSALIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISG 556
+ ++D+ + G EA+K++ E D + W+++++
Sbjct: 589 KKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/700 (33%), Positives = 391/700 (55%), Gaps = 13/700 (1%)
Query: 131 ARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSI 190
A +F +V WN++++G L ++ D+F EM D+ +++ L AC+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 191 LEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTV 250
LE FG + +K G +DV +A+VD+YAKC + +++ +F+R+ + VSW +
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 251 IAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDF 310
++G ++ AL++FK M+ GV I+ T S++ +C S + +Q+HA K+ F
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 311 EMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQS-YNAIIVGYAQNGQGVEALQLFR 369
+D V A + MY+K ++ +++VF L + Q+ N +I ++Q+ + +A++LF
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFT 442
Query: 370 LLQKSGLGFNEITLSGAFSACAVIAGYLE----GLQVHGLAIKSNLWSNICVANSILDMY 425
+ + GL +E FS C++++ L+ G QVHG +KS L ++ V +S+ +Y
Sbjct: 443 RMLQEGLRTDE------FSVCSLLS-VLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLY 495
Query: 426 GKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYG 485
KC + E+ +F + +D W ++I+ + G E + F ML PDE T
Sbjct: 496 SKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA 555
Query: 486 SVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEER 545
+VL C+ +L G +IH +++G+ + +GSAL++MY KCG ++ A+++ R E
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 546 DVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLH 605
D VS +++ISG+S +D F M+ G D F +++L LG Q+H
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 606 AQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGE 665
A I K + ++ + S+L+ MYSK G++ D F + D + W A+I YA HG
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 666 EALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCM 725
EAL+V+ M+ + KP+ TF+ VL AC+H GLVE+ + N M+ DY + P+ HY CM
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 795
Query: 726 VDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDS 785
VD LGRSG+L +A I M + D ++W TLL+ CKIHG VE+ + AA ++L+P D+
Sbjct: 796 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDA 855
Query: 786 STYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWI 825
YI LSNI A+ G WD++ TR+LM+ V+KEPG S +
Sbjct: 856 GAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 211/711 (29%), Positives = 366/711 (51%), Gaps = 54/711 (7%)
Query: 97 LKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLV 156
L+ L FD + ++SW Y+ G M A LF+ +P+ DV+S N ++SGY
Sbjct: 75 LRRYLLPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 157 GDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTG 216
F +++ F +M L + S+ + ACS L+ F + C +KMG+ V
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 217 SALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVG 276
SAL+D+++K + +D+ +F N WNT+IAG ++N + LF ++ VG
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF---HEMCVG 245
Query: 277 ISQS---TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDA 333
+ TY+S+L +CA+L L+ G + A +K E DV V TA +D+YAKC +M++A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEA 304
Query: 334 QKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVI 393
+VF+ +PN + S+ ++ GY ++ AL++F+ ++ SG+ N T++ SAC
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 394 AGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVF---DEMERRDAVSWN 450
+ E QVH KS + + VA +++ MY K D+ + VF D+++R++ V N
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--N 422
Query: 451 AIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS 510
+I +Q+ + + F ML + DEF+ S+L LN G Q+H +KS
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKS 479
Query: 511 GMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFF 570
G+ +L VGS+L +Y KCG +EE+ K+ + +D W ++ISGF+ +A F
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 571 SYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKC 630
S ML G PD+ T A +L C + ++ G ++H ++ + + + S LV+MYSKC
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 631 GNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVL 690
G+++ +R ++++ P+ D V+ +++I GY+ HGL ++ +F +M + + S+L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 691 RACA-----------HIGLVEKGL----HYFNVMLSDYSLH---------------PQLE 720
+A A H + + GL + +L+ YS P L
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 721 HYSCMVDILGRSGQLNKALK---LIQEMPFEADDVIWRTLLSICKIHGNVE 768
++ ++ + G+ N+AL+ L++E F+ D V + +LS C G VE
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 171/665 (25%), Positives = 319/665 (47%), Gaps = 53/665 (7%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
KP + T+S + + GK AR+I G + +FV ++ LY KC ++ A++
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAME 306
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
VF ++P VVSW +LSGY D A
Sbjct: 307 VFSRIPNPSVVSWTV-------------------------------MLSGYTKSNDAFSA 335
Query: 163 IDVFVEMGRLSGM-VDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
+++F EM R SG+ ++N + + AC Q+H + K GF D +AL+
Sbjct: 336 LEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALIS 394
Query: 222 MYAKCKKLDDSVSLFNRMSE---RNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGIS 278
MY+K +D S +F + + +N V N +I Q+ K +A++LF M + G+
Sbjct: 395 MYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTD 452
Query: 279 QSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN 338
+ + S+L + L L LG Q+H + LK+ +D+ VG++ +Y+KC ++ ++ K+F
Sbjct: 453 EFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQ 509
Query: 339 SLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLE 398
+P + ++I G+ + G EA+ LF + G +E TL+ + C+
Sbjct: 510 GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR 569
Query: 399 GLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQ 458
G ++HG +++ + + + +++++MY KC + A V+D + D VS +++I+ +Q
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 459 NGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFV 518
+G ++ F M+ + D F S+LKA A + G Q+H+ I K G+ + V
Sbjct: 630 HGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSV 689
Query: 519 GSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGV 578
GS+L+ MY K G +++ K + D+++W A+I+ ++ ++ +A + ++ M + G
Sbjct: 690 GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 579 KPDDFTYATLLDTCGNLATVGLG-MQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSR 637
KPD T+ +L C + V L++ + ++ + +VD + G ++++
Sbjct: 750 KPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAE 809
Query: 638 IMFEK-SPKRDFVTWNAMICGYAHHG---LGEEALKVFENMELENVKPNHA-TFISVLRA 692
K D + W ++ HG LG+ A K + +ELE P+ A +IS+
Sbjct: 810 SFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAK--KAIELE---PSDAGAYISLSNI 864
Query: 693 CAHIG 697
A +G
Sbjct: 865 LAEVG 869
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 237/478 (49%), Gaps = 14/478 (2%)
Query: 287 RSCAALSNLKLGTQLHAHALKTDF-EMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGL 345
+S + L NL+ L AH L+ DV + + L Y+ +M+DA K+F+++P +
Sbjct: 56 QSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDV 115
Query: 346 QSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGL 405
S N +I GY Q+ E+L+ F + G NEI+ SAC+ + L V
Sbjct: 116 VSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCH 175
Query: 406 AIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEET 465
IK + V ++++D++ K +A VF + + WN IIA +N N
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 466 LFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDM 525
F M +PD +TY SVL ACA + L +G + +R+IK G ++FV +A++D+
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDL 294
Query: 526 YCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTY 585
Y KCG + EA ++ R VVSW ++SG++ + + A + F M GV+ ++ T
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 586 ATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFE--KS 643
+++ CG + V Q+HA + K D +++ L+ MYSK G++ S +FE
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 644 PKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRA--CAHIGLVEK 701
+R + N MI ++ +A+++F M E ++ + + S+L C ++G K
Sbjct: 415 IQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG---K 470
Query: 702 GLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLS 759
+H + + L L S + + + G L ++ KL Q +PF+ D+ W +++S
Sbjct: 471 QVHGYTL---KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMIS 524
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 228/494 (46%), Gaps = 68/494 (13%)
Query: 63 NPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGY 122
N GKQ H + SG + V + L LY KC +L+ + K
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK-------------------- 506
Query: 123 AVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFA 182
LF+ +P +D W S++SG+ G +AI +F EM D + A
Sbjct: 507 -----------LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA 555
Query: 183 VALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSER 242
L CS G ++H + ++ G DK + GSALV+MY+KC L + +++R+ E
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 243 NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLH 302
+ VS +++I+G Q+ + LF+ M G + +SIL++ A LG Q+H
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 303 AHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGV 362
A+ K + VG++ L MY+K ++ D K F+ + L ++ A+I YAQ+G+
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 363 EALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSIL 422
EALQ++ L+++ G +++T G SAC+ HG ++ + + NS++
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACS-----------HGGLVEESYFH----LNSMV 780
Query: 423 DMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEF 482
YG E E R V ++ ++G E FI+ +H ++PD
Sbjct: 781 KDYGI------------EPENRHYV---CMVDALGRSGRLREAE-SFINNMH--IKPDAL 822
Query: 483 TYGSVLKACAGQQALNYGMQIHSRIIK---SGMGSNLFVGSALIDMYCKCGMVEEAKKIL 539
+G++L AC + G + I+ S G+ + + + L ++ + VEE +K++
Sbjct: 823 VWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEV-GEWDEVEETRKLM 881
Query: 540 KRTEERDVVSWNAI 553
K T + W+++
Sbjct: 882 KGTGVQKEPGWSSV 895
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 34/278 (12%)
Query: 16 CKTFLIASFSTFTTLKEGKTTAPAIT---TKPKTITFSRIFQELTHDQAQNPGKQAHARL 72
C +I+ F+ + L+E + T P T + + + + GK+ H
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 73 IVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIAR 132
+ +G + + + L+ +Y KC +LK A +V+D++P+ D VS ++LI GY+ G +
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 133 TLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILE 192
LF RD++ +SG+ + D+ + + LKA ++ +
Sbjct: 638 LLF-----RDMV-----MSGFTM---------------------DSFAISSILKAAALSD 666
Query: 193 DGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIA 252
+ G Q+H + K+G + GS+L+ MY+K +DD F++++ + ++W +IA
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 253 GCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCA 290
Q+ K EAL+++ +M++ G + T+ +L +C+
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/748 (32%), Positives = 407/748 (54%), Gaps = 29/748 (3%)
Query: 130 IARTLFEAMPERD-VISWNSLLSGYLLVGDFSKAIDVFVE---MGRLSGMVDNRSFAVAL 185
IA LF+ +R+ S N +S L ++A+ +F E +G +D + +AL
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 186 KACSILEDGDF--GVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERN 243
KAC GD G Q+H F+ GF V +A++ MY K + D+++ +F + + +
Sbjct: 86 KACR----GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 244 WVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHA 303
VSWNT+++G N AL M+ GV TY++ L C LG QL +
Sbjct: 142 VVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 304 HALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQ-GV 362
+KT E D++VG + + MY++ + A++VF+ + + S+N+++ G +Q G G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 363 EALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSIL 422
EA+ +FR + + G+ + ++ + + C Q+HGL IK S + V N ++
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 423 DMYGKCQDVIEACH-VFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDE 481
Y KC V+EA VF +M R+ VSW +I+ N+++ + F++M + P+E
Sbjct: 319 SRYSKC-GVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNE 372
Query: 482 FTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKR 541
T+ ++ A + + G++IH IK+G S VG++ I +Y K +E+AKK +
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFED 432
Query: 542 TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGL- 600
R+++SWNA+ISGF+ S +A K F P+++T+ ++L+ + +
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVK 491
Query: 601 -GMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYA 659
G + HA ++K + S +SS L+DMY+K GN+ +S +F + +++ W ++I Y+
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS 551
Query: 660 HHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQL 719
HG E + +F M ENV P+ TF+SVL AC G+V+KG FN+M+ Y+L P
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 720 EHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQ 779
EHYSCMVD+LGR+G+L +A +L+ E+P + + +++L C++HGNV++ + A ++
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 780 LDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVND-----KVHTF 834
+ P+ S +Y+ + NIYA+ WDK + R+ MR+ V KE G SWI V D + F
Sbjct: 672 MKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGF 731
Query: 835 LVRDKDHPKCEEIYEKLGLLIGEMKWRG 862
DK HPK +EIY + ++ EM G
Sbjct: 732 SSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 254 bits (648), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 287/584 (49%), Gaps = 44/584 (7%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
G Q H SGF + VSN ++ +Y K +AL +F+ + DVVSWN ++ G+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF-- 152
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
D A++ V M + D +++ A
Sbjct: 153 --------------------------------DDNQIALNFVVRMKSAGVVFDAFTYSTA 180
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNW 244
L C E G+QL +K G + D+V G++ + MY++ + +F+ MS ++
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM 240
Query: 245 VSWNTVIAGCVQNYKF-IEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHA 303
+SWN++++G Q F EA+ +F+ M + GV + ++ S++ +C ++LKL Q+H
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 304 HALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVE 363
+K +E + VG + Y+KC + + VF+ + + S+ +I + +
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDD 355
Query: 364 ALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILD 423
A+ +F ++ G+ NE+T G +A EGL++HGL IK+ S V NS +
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFIT 415
Query: 424 MYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFT 483
+Y K + + +A F+++ R+ +SWNA+I+ AQNG E L F+S M P+E+T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYT 474
Query: 484 YGSVLKACAGQQ--ALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKR 541
+GSVL A A + ++ G + H+ ++K G+ S V SAL+DMY K G ++E++K+
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNE 534
Query: 542 TEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLG 601
+++ W +IIS +S E F M+K V PD T+ ++L C V G
Sbjct: 535 MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 602 MQLHAQIIK-QEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSP 644
++ +I+ ++ S +VDM + G ++++ + + P
Sbjct: 595 YEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 181/399 (45%), Gaps = 42/399 (10%)
Query: 47 ITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDK 106
++F+ + H+ +Q H I G++ + V N L+ Y KC L++ VF +
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 107 MPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVF 166
M +R+VVSW + IS N A+ +F
Sbjct: 337 MSERNVVSWTTM-------------------------ISSNK-----------DDAVSIF 360
Query: 167 VEMGRLSGMVDNR-SFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAK 225
+ M R G+ N +F + A E G+++H +K GF + G++ + +YAK
Sbjct: 361 LNM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 226 CKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASI 285
+ L+D+ F ++ R +SWN +I+G QN EALK+F + ++ T+ S+
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSV 478
Query: 286 LRSCAALSNL--KLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
L + A ++ K G + HAH LK +V +A LDMYAK N+ +++KVFN +
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVH 403
+ +II Y+ +G + LF + K + + +T +AC +G ++
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIF 598
Query: 404 GLAIKS-NLWSNICVANSILDMYGKCQDVIEACHVFDEM 441
+ I+ NL + + ++DM G+ + EA + E+
Sbjct: 599 NMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 35/301 (11%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P +TF + + ++ G + H I +GF V N I LY K L+ A K
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F+ + R+++SWNA+I G+A G A +F S A
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMF-----------------------LSAAA 466
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDF--GVQLHCFAMKMGFDKDVVTGSALVD 221
+ M + +F L A + ED G + H +K+G + V SAL+D
Sbjct: 467 ET---------MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
MYAK +D+S +FN MS++N W ++I+ + F + LF M K V T
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 282 YASILRSCAALSNLKLGTQLHAHALKT-DFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
+ S+L +C + G ++ ++ + E + +DM + + +A+++ + +
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 341 P 341
P
Sbjct: 638 P 638
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/685 (32%), Positives = 376/685 (54%), Gaps = 11/685 (1%)
Query: 176 VDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSL 235
+D+ ++ L+ C D +HC +K G D+ + L++ Y K D+++L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 236 FNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNL 295
F+ M ERN VS+ T+ Q Y + + L+ + + G ++ + S L+ +L
Sbjct: 107 FDEMPERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 296 KLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGY 355
++ LH+ +K ++ + VG A ++ Y+ C ++ A+ VF + + + I+ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 356 AQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNI 415
+NG ++L+L ++ +G N T A A + + VHG +K+ +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 416 CVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHA 475
V +L +Y + D+ +A VF+EM + D V W+ +IA QNG E + FI M A
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 476 IMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEA 535
+ P+EFT S+L CA + G Q+H ++K G +++V +ALID+Y KC ++ A
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 536 KKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNL 595
K+ ++ VSWN +I G+ A F L+ V + T+++ L C +L
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 596 ATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMI 655
A++ LG+Q+H IK V +S++L+DMY+KCG+++ ++ +F + D +WNA+I
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522
Query: 656 CGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSL 715
GY+ HGLG +AL++ + M+ + KPN TF+ VL C++ GL+++G F M+ D+ +
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 716 HPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAAS 775
P LEHY+CMV +LGRSGQL+KA+KLI+ +P+E +IWR +LS N E A +A
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAE 642
Query: 776 SLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFL 835
+L+++P+D +TY+L+SN+YA A W ++ R+ M++ V+KEPG SWI VH F
Sbjct: 643 EILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFS 702
Query: 836 VRDKDHPKCEEIYEKLGLLIGEMKW 860
V DHP + L+ G ++W
Sbjct: 703 VGLSDHP-------DMKLINGMLEW 720
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 182/674 (27%), Positives = 321/674 (47%), Gaps = 42/674 (6%)
Query: 111 DVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMG 170
D+ + N L+ Y G A LF+ MPER+ +S+ +L GY I ++ +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLH 138
Query: 171 RLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLD 230
R ++ F LK L+ + LH +K+G+D + G+AL++ Y+ C +D
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 231 DSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCA 290
+ ++F + ++ V W +++ V+N F ++LKL M+ G + T+ + L++
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 291 ALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNA 350
L +H LKT + +D VG L +Y + +MSDA KVFN +P + ++
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF 318
Query: 351 IIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSN 410
+I + QNG EA+ LF ++++ + NE TLS + CA+ G Q+HGL +K
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 411 LWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFI 470
+I V+N+++D+Y KC+ + A +F E+ ++ VSWN +I G + F
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 471 SMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCG 530
L + E T+ S L ACA +++ G+Q+H IK+ + V ++LIDMY KCG
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 531 MVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLD 590
++ A+ + E DV SWNA+ISG+S A + M KP+ T+ +L
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 591 TCGNLATVGLGMQLHAQIIKQE-MQSDVYISSTLVDMYSKCGNVQDSRIMFEKSP-KRDF 648
C N + G + +I+ ++ + + +V + + G + + + E P +
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 618
Query: 649 VTWNAMICGYAHHGLGEEALKVFENMELENVKP-NHATFI----------------SVLR 691
+ W AM+ + E A + E E+ + P + AT++ S+ +
Sbjct: 619 MIWRAMLSASMNQNNEEFARRSAE--EILKINPKDEATYVLVSNMYAGAKQWANVASIRK 676
Query: 692 ACAHIGL-VEKGL---------HYFNVMLSDYSLHPQLEHYSCMVDILG----RSGQLNK 737
+ +G+ E GL HYF+V LSD HP ++ + M++ L R+G +
Sbjct: 677 SMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD---HPDMKLINGMLEWLNMKATRAGYVPD 733
Query: 738 ALKLIQEMPFEADD 751
++ +M E D
Sbjct: 734 RNAVLLDMDDEEKD 747
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/596 (29%), Positives = 281/596 (47%), Gaps = 71/596 (11%)
Query: 60 QAQNP--GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNA 117
Q +P K H ++ G +F +N L+ Y+K K AL +FD+MP+R+ VS+
Sbjct: 61 QKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVT 120
Query: 118 LIFGYAVRGEMGIAR------------------TLFEAMPERDVISW------------- 146
L GYA + +G+ LF ++ + ++ W
Sbjct: 121 LAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSN 180
Query: 147 ----NSLLSGYLLVGDFSKAIDVF------------------VEMG------------RL 172
+L++ Y + G A VF VE G R+
Sbjct: 181 AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM 240
Query: 173 SG-MVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDD 231
+G M +N +F ALKA L DF +H +K + D G L+ +Y + + D
Sbjct: 241 AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSD 300
Query: 232 SVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAA 291
+ +FN M + + V W+ +IA QN EA+ LF M++ V ++ T +SIL CA
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360
Query: 292 LSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAI 351
LG QLH +K F++D+ V A +D+YAKC M A K+F L + S+N +
Sbjct: 361 GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 352 IVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNL 411
IVGY G+G +A +FR ++ + E+T S A ACA +A G+QVHGLAIK+N
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480
Query: 412 WSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFIS 471
+ V+NS++DMY KC D+ A VF+EME D SWNA+I+ + +G + L
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540
Query: 472 MLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSALIDMYCKCG 530
M +P+ T+ VL C+ ++ G + +I+ G+ L + ++ + + G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600
Query: 531 MVEEAKKILKRTE-ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTY 585
+++A K+++ E V+ W A++S E A + +LK+ K D+ TY
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK-DEATY 655
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 223/459 (48%), Gaps = 44/459 (9%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P TF + A + K H +++ + + V L+QLY + ++ A KV
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F++MP+ DVV W+ +I + G ++A+
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFC-------------------------------NEAV 333
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
D+F+ M + + + + L C+I + G QLH +K+GFD D+ +AL+D+Y
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
AKC+K+D +V LF +S +N VSWNTVI G + +A +F+ + V +++ T++
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Query: 284 SILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNC 343
S L +CA+L+++ LG Q+H A+KT+ V V + +DMYAKC ++ AQ VFN +
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513
Query: 344 GLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ-- 401
+ S+NA+I GY+ +G G +AL++ +++ N +T G S C+ AG ++ Q
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN-AGLIDQGQEC 572
Query: 402 ----VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVS-WNAIIAVQ 456
+ I+ L C ++ + G+ + +A + + + +V W A+++
Sbjct: 573 FESMIRDHGIEPCLEHYTC----MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA- 627
Query: 457 AQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQ 495
+ N N EE + I DE TY V AG +
Sbjct: 628 SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 224/491 (45%), Gaps = 8/491 (1%)
Query: 276 GISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQK 335
G+ Y ++LR C ++ +H LK +D+ L+ Y K DA
Sbjct: 46 GLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 336 VFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAG 395
+F+ +P S+ + GYA + + L+ L + G N + +
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 396 YLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAV 455
+H +K SN V ++++ Y C V A VF+ + +D V W I++
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 456 QAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSN 515
+NG E++L M A P+ +T+ + LKA G A ++ +H +I+K+ +
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 516 LFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLK 575
VG L+ +Y + G + +A K+ + DVV W+ +I+ F +A F M +
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 576 MGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQD 635
V P++FT +++L+ C GLG QLH ++K D+Y+S+ L+D+Y+KC +
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 636 SRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAH 695
+ +F + ++ V+WN +I GY + G G +A +F V TF S L ACA
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 696 IGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVI-W 754
+ ++ G+ + + + ++ + ++D+ + G + A + EM E DV W
Sbjct: 462 LASMDLGVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEM--ETIDVASW 518
Query: 755 RTLLSICKIHG 765
L+S HG
Sbjct: 519 NALISGYSTHG 529
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 26 TFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSN 85
F+ +E ++T +TFS + + G Q H I + + VSN
Sbjct: 433 AFSMFREALRNQVSVTE----VTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 86 CLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDV-- 143
LI +Y KC ++K A VF++M DV SWNALI GY+ G A + + M +RD
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 144 --ISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGM 175
+++ +LSG G + + F M R G+
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 354/613 (57%), Gaps = 5/613 (0%)
Query: 246 SWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHA 305
+WN I V +E+L LF+ M++ G + T+ + ++CA L+++ +HAH
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 306 LKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEAL 365
+K+ F DV VGTAT+DM+ KCN++ A KVF +P ++NA++ G+ Q+G +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 366 QLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ-VHGLAIKSNLWSNICVANSILDM 424
LFR ++ + + + +T+ + A L+ L+ +H + I+ + + VAN+ +
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQS-ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 425 YGKCQDVIEACHVFDEMER--RDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEF 482
YGKC D+ A VF+ ++R R VSWN++ + G + + ML +PD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 483 TYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRT 542
T+ ++ +C + L G IHS I G ++ + I MY K A+ +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 543 EERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGM 602
R VSW +ISG++ ++A F M+K G KPD T +L+ CG ++ G
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 603 QLHAQI-IKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHH 661
+ A+ I + +V I + L+DMYSKCG++ ++R +F+ +P++ VTW MI GYA +
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 662 GLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEH 721
G+ EALK+F M + KPNH TF++VL+ACAH G +EKG YF++M Y++ P L+H
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH 497
Query: 722 YSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLD 781
YSCMVD+LGR G+L +AL+LI+ M + D IW LL+ CKIH NV++AE+AA SL L+
Sbjct: 498 YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLE 557
Query: 782 PQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDH 841
PQ ++ Y+ ++NIYA AGMWD + R +M+Q ++K PG S I VN K H+F V + H
Sbjct: 558 PQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Query: 842 PKCEEIYEKLGLL 854
+ E IY L L
Sbjct: 618 VENEVIYFTLNGL 630
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 272/561 (48%), Gaps = 10/561 (1%)
Query: 130 IARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACS 189
I R L+ V +WN + + D +++ +F EM R +N +F KAC+
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 190 ILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNT 249
L D +H +K F DV G+A VDM+ KC +D + +F RM ER+ +WN
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 250 VIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTD 309
+++G Q+ +A LF+ M+ + T ++++S + +LKL +HA ++
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 310 FEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP--NCGLQSYNAIIVGYAQNGQGVEALQL 367
++ V V + Y KC ++ A+ VF ++ + + S+N++ Y+ G+ +A L
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 368 FRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGK 427
+ L+ + + T ++C +G +H AI +I N+ + MY K
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 303
Query: 428 CQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSV 487
+D A +FD M R VSW +I+ A+ G+ +E L F +M+ + +PD T S+
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 488 LKACAGQQALNYGMQIHSRI-IKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERD 546
+ C +L G I +R I N+ + +ALIDMY KCG + EA+ I T E+
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 547 VVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHA 606
VV+W +I+G++ +A K FS M+ + KP+ T+ +L C + ++ G + +
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YF 482
Query: 607 QIIKQ--EMQSDVYISSTLVDMYSKCGNVQDS-RIMFEKSPKRDFVTWNAMICGYAHH-- 661
I+KQ + + S +VD+ + G ++++ ++ S K D W A++ H
Sbjct: 483 HIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRN 542
Query: 662 -GLGEEALKVFENMELENVKP 681
+ E+A + N+E + P
Sbjct: 543 VKIAEQAAESLFNLEPQMAAP 563
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 237/520 (45%), Gaps = 38/520 (7%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+P TF + + + HA LI S F +FV + +++KC+++ A K
Sbjct: 49 EPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAK 108
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
VF++MP+RD +WNA++ G+ G A +LF M ++ +
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT---------------PDS 153
Query: 163 IDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDM 222
+ V ++ + SF +LK +LE +H +++G D V + +
Sbjct: 154 VTVMT-------LIQSASFEKSLK---LLE------AMHAVGIRLGVDVQVTVANTWIST 197
Query: 223 YAKCKKLDDSVSLFNRMS--ERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
Y KC LD + +F + +R VSWN++ + +A L+ +M + S
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
T+ ++ SC L G +H+HA+ + D+ + MY+K + A+ +F+ +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
+ S+ +I GYA+ G EAL LF + KSG + +TL S C G
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 401 QVHGLA-IKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
+ A I N+ + N+++DMY KC + EA +FD + V+W +IA A N
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS--GMGSNLF 517
G E L F M+ +P+ T+ +VL+ACA +L G + + I+K + L
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLD 496
Query: 518 VGSALIDMYCKCGMVEEAKKILKRTEER-DVVSWNAIISG 556
S ++D+ + G +EEA ++++ + D W A+++
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 194/436 (44%), Gaps = 43/436 (9%)
Query: 23 SFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIF 82
+FS F ++ + T P ++T + Q + +++ + HA I G +
Sbjct: 137 AFSLFREMRLNEIT-------PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 83 VSNCLIQLYIKCSNLKSALKVFDKMPQ--RDVVSWNALIFGYAVRGEMGIARTLFEAMPE 140
V+N I Y KC +L SA VF+ + + R VVSWN++ Y+V GE A L+ M
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM-- 247
Query: 141 RDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQL 200
L +F + F+ + +C E G +
Sbjct: 248 --------------LREEFKPDLSTFINLA---------------ASCQNPETLTQGRLI 278
Query: 201 HCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKF 260
H A+ +G D+D+ + + MY+K + + LF+ M+ R VSW +I+G +
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 261 IEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMD-VIVGTA 319
EAL LF M K G T S++ C +L+ G + A A + D V++ A
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 320 TLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFN 379
+DMY+KC ++ +A+ +F++ P + ++ +I GYA NG +EAL+LF + N
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 380 EITLSGAFSACAVIAGYLEGLQ-VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVF 438
IT ACA +G + H + N+ + + ++D+ G+ + EA +
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 439 DEME-RRDAVSWNAII 453
M + DA W A++
Sbjct: 519 RNMSAKPDAGIWGALL 534
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 547 VVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHA 606
V +WN I ++ F M + G +P++FT+ + C LA VG +HA
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 607 QIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEE 666
+IK SDV++ + VDM+ KC +V + +FE+ P+RD TWNAM+ G+ G ++
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 667 ALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLS---DYSLHPQLEHYS 723
A +F M L + P+ T ++++++ + EK L M + + Q+ +
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 724 CMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLS 759
+ G+ G L+ A KL+ FEA D RT++S
Sbjct: 193 TWISTYGKCGDLDSA-KLV----FEAIDRGDRTVVS 223
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/775 (30%), Positives = 420/775 (54%), Gaps = 12/775 (1%)
Query: 88 IQLYIKCSNLK------SALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPER 141
+ L+ CS+L+ + L V ++ +RD + LI YA G +R +FEA P
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRL-RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 142 DVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACS-ILEDGDFGVQL 200
D + L+ + AID++ + + + F L+AC+ E G ++
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 201 HCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKF 260
H +K G D D V ++L+ MY + L D+ +F+ M R+ V+W+T+++ C++N +
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 261 IEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTAT 320
++AL++FK M GV T S++ CA L L++ +H + F++D + +
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 321 LDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNE 380
L MY+KC ++ ++++F + S+ A+I Y + +AL+ F + KSG+ N
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 381 ITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNI-CVANSILDMYGKCQDVIEACHVFD 439
+TL S+C +I EG VHG A++ L N ++ +++++Y +C + + V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 440 EMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNY 499
+ R+ V+WN++I++ A G + L F M+ ++PD FT S + AC +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 500 GMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSG 559
G QIH +I++ + S+ FV ++LIDMY K G V+ A + + + R VV+WN+++ GFS
Sbjct: 424 GKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 560 AKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYI 619
S +A F YM ++ ++ T+ ++ C ++ ++ G +H ++I ++ D++
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFT 541
Query: 620 SSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENV 679
+ L+DMY+KCG++ + +F R V+W++MI Y HG A+ F M
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 680 KPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKAL 739
KPN F++VL AC H G VE+G +YFN+M S + + P EH++C +D+L RSG L +A
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 740 KLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAG 799
+ I+EMPF AD +W +L++ C+IH +++ + + L + D+ Y LLSNIYA+ G
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 800 MWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLL 854
W++ R M+ + ++K PG S I ++ KV F +++ + +EIY LG L
Sbjct: 721 EWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 245/494 (49%), Gaps = 17/494 (3%)
Query: 280 STYASILRSCAALSNLKLGTQLHAHALKTD-FEMDVIVGTATLDMYAKCNNMSDAQKVFN 338
+ Y + RSC S+L+L +QLHAH L T D + T ++ YA + ++ VF
Sbjct: 2 TQYMPLFRSC---SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFE 58
Query: 339 SLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLE 398
+ P Y +I A+ L+ L ++ ACA +L
Sbjct: 59 AFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS 118
Query: 399 -GLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQA 457
G +VHG IK + + + S+L MYG+ ++ +A VFD M RD V+W+ +++
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 458 QNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLF 517
+NG + L F M+ +EPD T SV++ CA L +H +I + +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 518 VGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMG 577
+ ++L+ MY KCG + +++I ++ +++ VSW A+IS ++ + SE A + FS M+K G
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 578 VKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDV-YISSTLVDMYSKCGNVQDS 636
++P+ T ++L +CG + + G +H +++E+ + +S LV++Y++CG + D
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 637 RIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHI 696
+ R+ V WN++I YAH G+ +AL +F M + +KP+ T S + AC +
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 697 GLVEKGL----HYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDV 752
GLV G H +SD + L +D+ +SG ++ A + ++ + V
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQNSL------IDMYSKSGSVDSASTVFNQIKHRS-VV 471
Query: 753 IWRTLLSICKIHGN 766
W ++L +GN
Sbjct: 472 TWNSMLCGFSQNGN 485
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/589 (26%), Positives = 266/589 (45%), Gaps = 75/589 (12%)
Query: 41 TTKPKTITFSRIFQELTHDQAQ-NPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKS 99
TT+ F + + + + G + H R+I G + L+ +Y + NL
Sbjct: 95 TTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSD 154
Query: 100 ALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAM----PERDVISW--------- 146
A KVFD MP RD+V+W+ L+ GE+ A +F+ M E D ++
Sbjct: 155 AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 147 --------------------------NSLLSGYLLVGDFSKAIDVFVEMGR-----LSGM 175
NSLL+ Y GD + +F ++ + + M
Sbjct: 215 LGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAM 274
Query: 176 VDN-----------RSFAVALK---------------ACSILEDGDFGVQLHCFAMKMGF 209
+ + RSF+ +K +C ++ G +H FA++
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 210 DKDVVTGS-ALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFK 268
D + + S ALV++YA+C KL D ++ +S+RN V+WN++I+ I+AL LF+
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 269 IMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCN 328
M + T AS + +C + LG Q+H H ++TD D V + +DMY+K
Sbjct: 395 QMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSG 453
Query: 329 NMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFS 388
++ A VFN + + + ++N+++ G++QNG VEA+ LF + S L NE+T
Sbjct: 454 SVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQ 513
Query: 389 ACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVS 448
AC+ I +G VH I S L ++ +++DMY KC D+ A VF M R VS
Sbjct: 514 ACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVS 572
Query: 449 WNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRII 508
W+++I +G + F M+ + +P+E + +VL AC ++ G + +
Sbjct: 573 WSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK 632
Query: 509 KSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISG 556
G+ N + ID+ + G ++EA + +K D W ++++G
Sbjct: 633 SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 22 ASFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTI 81
++ STF + E T KP + F + H + GK + G P
Sbjct: 588 SAISTFNQMVESGT-------KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNS 640
Query: 82 FVSNCLIQLYIKCSNLKSALKVFDKMP-QRDVVSWNALIFGYAVRGEMGIARTL 134
C I L + +LK A + +MP D W +L+ G + +M I + +
Sbjct: 641 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAI 694
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/819 (30%), Positives = 419/819 (51%), Gaps = 75/819 (9%)
Query: 49 FSRIFQELTHDQAQNPGKQAHARLIVSG--FKPTIFVSNCLIQLYIKCSNLKSALKVFDK 106
+ I Q +++ + GKQ HAR++ +G + ++ L+ Y KC L+
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALE-------- 124
Query: 107 MPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVF 166
IA LF + R+V SW +++ +G A+ F
Sbjct: 125 -----------------------IAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 167 VEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKC 226
VEM DN KAC L+ FG +H + +K G + V S+L DMY KC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 227 KKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASIL 286
LDD+ +F+ + +RN V+WN ++ G VQN K EA++LF M+K GV ++ T ++ L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 287 RSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQ 346
+ A + ++ G Q HA A+ E+D I+GT+ L+ Y K + A+ VF+ + +
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 347 SYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLA 406
++N II GY Q G +A+ + +L++ L ++ +TL+ SA A G +V
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 407 IKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETL 466
I+ + S+I +A++++DMY KC +++A VFD +D + WN ++A A++G E L
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 467 FYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMY 526
F YGMQ+ G+ N+ + +I
Sbjct: 462 RLF-----------------------------YGMQLE------GVPPNVITWNLIILSL 486
Query: 527 CKCGMVEEAKKILKRTEER----DVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDD 582
+ G V+EAK + + + +++SW +++G SE+A F M + G++P+
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 583 FTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSD-VYISSTLVDMYSKCGNVQDSRIMFE 641
F+ L C +LA++ +G +H II+ S V I ++LVDMY+KCG++ + +F
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 642 KSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEK 701
+ NAMI YA +G +EA+ ++ ++E +KP++ T +VL AC H G + +
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 702 GLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSIC 761
+ F ++S S+ P LEHY MVD+L +G+ KAL+LI+EMPF+ D + ++L++ C
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 762 KIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPG 821
E+ + + LL+ +P++S Y+ +SN YA G WD++ R +M+ ++K+PG
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 822 CSWIGVN--DKVHTFLVRDKDHPKCEEIYEKLGLLIGEM 858
CSWI + + VH F+ DK H + EI L LL+ +M
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 259/497 (52%), Gaps = 3/497 (0%)
Query: 251 IAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTD- 309
++ +N + EAL L M + I Y IL+ C +L G Q+HA LK
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 310 -FEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLF 368
+ + + T + YAKC+ + A+ +F+ L + S+ AII + G AL F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 369 RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKC 428
+ ++ + + + AC + G VHG +KS L + VA+S+ DMYGKC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 429 QDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVL 488
+ +A VFDE+ R+AV+WNA++ QNG EE + F M +EP T + L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 489 KACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVV 548
A A + G Q H+ I +GM + +G++L++ YCK G++E A+ + R E+DVV
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 549 SWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQI 608
+WN IISG+ EDA M +K D T ATL+ + LG ++
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 609 IKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEAL 668
I+ +SD+ ++ST++DMY+KCG++ D++ +F+ + ++D + WN ++ YA GL EAL
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 669 KVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDI 728
++F M+LE V PN T+ ++ + G V++ F M S + P L ++ M++
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNG 520
Query: 729 LGRSGQLNKALKLIQEM 745
+ ++G +A+ +++M
Sbjct: 521 MVQNGCSEEAILFLRKM 537
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 233/503 (46%), Gaps = 66/503 (13%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
+P +T S + GKQ+HA IV+G + + L+ Y K ++ A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
VFD+M ++DVV+WN +I GY +G LV D
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQG----------------------------LVED--- 358
Query: 162 AIDVFVEMGRLSGM-VDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
AI ++ RL + D + A + A + E+ G ++ C+ ++ F+ D+V S ++
Sbjct: 359 AI-YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
DMYAKC + D+ +F+ E++ + WNT++A ++ EAL+LF MQ GV +
Sbjct: 418 DMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVI 477
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
T+ I+ LS L+ G A DM+ + + +
Sbjct: 478 TWNLII-----LSLLRNGQVDEAK-----------------DMFLQMQSSG-------II 508
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
PN L S+ ++ G QNG EA+ R +Q+SGL N +++ A SACA +A G
Sbjct: 509 PN--LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGR 566
Query: 401 QVHGLAIKSNLWSN-ICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
+HG I++ S+ + + S++DMY KC D+ +A VF + NA+I+ A
Sbjct: 567 TIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALY 626
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRII-KSGMGSNLFV 518
GN +E + + S+ ++PD T +VL AC +N ++I + I+ K M L
Sbjct: 627 GNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEH 686
Query: 519 GSALIDMYCKCGMVEEAKKILKR 541
++D+ G E+A ++++
Sbjct: 687 YGLMVDLLASAGETEKALRLIEE 709
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/752 (31%), Positives = 416/752 (55%), Gaps = 21/752 (2%)
Query: 126 GEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMV--DNRSFAV 183
G +AR LF+A+P+ + WN+++ G++ +A+ + M + + D +++
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 184 ALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVS------LFN 237
LKAC+ ++ G +HC ++ + V ++L++MY C D +F+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 238 RMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKL 297
M +N V+WNT+I+ V+ + EA + F IM ++ V S ++ ++ + + ++K
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 298 GTQLHAHALK--TDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGY 355
+ LK ++ D+ V ++ + MYA+ ++ +++VF+S ++ +N +I Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 356 AQNGQGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSN 414
QN VE+++LF + + +E+T A SA + + G Q HG K+
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 415 ICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLH 474
I + NS++ MY +C V ++ VF M RD VSWN +I+ QNG ++E L M
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 475 AIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVG--SALIDMYCKCGMV 532
+ D T ++L A + + G Q H+ +I+ G+ F G S LIDMY K G++
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLI 469
Query: 533 EEAKKILKRT--EERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLD 590
++K+ + + ERD +WN++ISG++ +E F ML+ ++P+ T A++L
Sbjct: 470 RISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILP 529
Query: 591 TCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVT 650
C + +V LG QLH I+Q + +V+++S LVDMYSK G ++ + MF ++ +R+ VT
Sbjct: 530 ACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVT 589
Query: 651 WNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVML 710
+ MI GY HG+GE A+ +F +M+ +KP+ TF++VL AC++ GL+++GL F M
Sbjct: 590 YTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMR 649
Query: 711 SDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDV-IWRTLLSICKIHGNVEV 769
Y++ P EHY C+ D+LGR G++N+A + ++ + E + +W +LL CK+HG +E+
Sbjct: 650 EVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELEL 709
Query: 770 AEEAASSLLQLDP-QDSSTY-ILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGV 827
AE + L + D ++ S Y +LLSN+YA+ W + RR MR+ ++KE G S I +
Sbjct: 710 AETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Query: 828 NDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMK 859
V+ F+ RD++HP EIY+ + L +M+
Sbjct: 770 AGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 254/523 (48%), Gaps = 46/523 (8%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSG--FKPTIFVSNCLIQLYIKCSNLKSA 100
KP ++F +F ++ ++ + ++ G + +FV + I +Y + +++S+
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 101 LKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLF-EAMPERDVISWNSLLSGYLLVGDF 159
+VFD +R++ WN +I Y + + LF EA+ ++++S
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS-------------- 316
Query: 160 SKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSAL 219
D ++ +A A S L+ + G Q H F K + +V ++L
Sbjct: 317 -----------------DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSL 359
Query: 220 VDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQ 279
+ MY++C + S +F M ER+ VSWNT+I+ VQN E L L MQK G I
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 419
Query: 280 STYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVF-- 337
T ++L + + L N ++G Q HA ++ + + + + +DMY+K + +QK+F
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFEG 478
Query: 338 NSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYL 397
+ ++N++I GY QNG + +FR + + + N +T++ AC+ I
Sbjct: 479 SGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVD 538
Query: 398 EGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQA 457
G Q+HG +I+ L N+ VA++++DMY K + A +F + + R++V++ +I
Sbjct: 539 LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYG 598
Query: 458 QNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLF 517
Q+G E + F+SM + ++PD T+ +VL AC+ ++ G++I + + N+
Sbjct: 599 QHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV---YNIQ 655
Query: 518 VGSA----LIDMYCKCGMVEEAKKILKRTEERDVVS--WNAII 554
S + DM + G V EA + +K E ++ W +++
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 527 CKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMG--VKPDDFT 584
C+ G + A+++ + V WN II GF +A F+S M K D +T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 585 YATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDS------RI 638
Y++ L C + G +H +I+ S + ++L++MY C N D R
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 639 MFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGL 698
+F+ +++ V WN +I Y G EA + F M VKP+ +F++V A +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 699 VEKGLHYFNVML 710
++K ++ +ML
Sbjct: 230 IKKANVFYGLML 241
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/608 (36%), Positives = 331/608 (54%), Gaps = 5/608 (0%)
Query: 256 QNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVI 315
++ K EA + + M K GV +S +Y + +C L +L G LH V+
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 316 VGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSG 375
+ L MY +C ++ DA K+F+ + S +I YA+ G +A+ LF + SG
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 376 LGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEAC 435
+ + G Q+H I++ L SN + I++MY KC ++ A
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 436 HVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQ 495
VFD+M + V+ ++ Q G + L F+ ++ +E D F + VLKACA +
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 496 ALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIIS 555
LN G QIH+ + K G+ S + VG+ L+D Y KC E A + + E + VSW+AIIS
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 556 GFSGAKRSEDAHKFF-SYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQ 614
G+ + E+A K F S K + FTY ++ C LA +G Q+HA IK+ +
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 615 SDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM 674
Y S L+ MYSKCG + D+ +FE D V W A I G+A++G EAL++FE M
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 675 ELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQ 734
+KPN TFI+VL AC+H GLVE+G H + ML Y++ P ++HY CM+DI RSG
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 735 LNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNI 794
L++ALK ++ MPFE D + W+ LS C H N+E+ E A L QLDP+D++ Y+L N+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 795 YADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKL--- 851
Y AG W++ + +LM + ++KE CSWI K+H F+V DK HP+ +EIYEKL
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Query: 852 -GLLIGEM 858
G + G+M
Sbjct: 660 DGFMEGDM 667
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 258/530 (48%), Gaps = 12/530 (2%)
Query: 159 FSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDK-DVVTGS 217
++A + EM + V + S+ +AC L G LH M+MG + V+ +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQN 122
Query: 218 ALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGI 277
++ MY +C+ L+D+ LF+ MSE N VS T+I+ + +A+ LF M G
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 278 SQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVF 337
S Y ++L+S L G Q+HAH ++ + + T ++MY KC + A++VF
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 338 NSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYL 397
+ + + ++VGY Q G+ +AL+LF L G+ ++ S ACA +
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 398 EGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQA 457
G Q+H K L S + V ++D Y KC AC F E+ + VSW+AII+
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 458 QNGNEEETLFYFISMLH---AIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGS 514
Q EE + F S+ +I+ + FTY S+ +AC+ N G Q+H+ IK +
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASIL--NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 515 NLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYML 574
+ + SALI MY KCG +++A ++ + + D+V+W A ISG + + +A + F M+
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 575 KMGVKPDDFTYATLLDTCGNLATVGLGMQ-LHAQIIKQEMQSDVYISSTLVDMYSKCGNV 633
G+KP+ T+ +L C + V G L + K + + ++D+Y++ G +
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 634 QDSRIMFEKSP-KRDFVTWNAMICGYAHHG---LGEEALKVFENMELENV 679
++ + P + D ++W + G H LGE A + ++ E+
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDT 590
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 259/514 (50%), Gaps = 34/514 (6%)
Query: 46 TITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFD 105
+ ++ +F+ ++ + G+ H R+ + P++ + NC++Q+Y +C +L+ A K+FD
Sbjct: 83 SYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 106 KMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDV 165
+M + + VS +I YA +G + A LF SG L GD + +
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLF---------------SGMLASGDKPPS-SM 186
Query: 166 FVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAK 225
+ + L +V+ R+ DFG Q+H ++ G + + +V+MY K
Sbjct: 187 YTTL--LKSLVNPRAL-------------DFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 226 CKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASI 285
C L + +F++M+ + V+ ++ G Q + +ALKLF + GV ++ +
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 286 LRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGL 345
L++CA+L L LG Q+HA K E +V VGT +D Y KC++ A + F +
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351
Query: 346 QSYNAIIVGYAQNGQGVEALQLFRLLQ-KSGLGFNEITLSGAFSACAVIAGYLEGLQVHG 404
S++AII GY Q Q EA++ F+ L+ K+ N T + F AC+V+A G QVH
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 405 LAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEE 464
AIK +L + ++++ MY KC + +A VF+ M+ D V+W A I+ A GN E
Sbjct: 412 DAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 465 TLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQ-IHSRIIKSGMGSNLFVGSALI 523
L F M+ M+P+ T+ +VL AC+ + G + + + K + + +I
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531
Query: 524 DMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISG 556
D+Y + G+++EA K +K E D +SW +SG
Sbjct: 532 DIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 233/458 (50%), Gaps = 6/458 (1%)
Query: 346 QSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGL 405
Q N +V +++ + EA + + + K+G+ + + F AC + G +H
Sbjct: 49 QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR 108
Query: 406 AIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEET 465
++ + N +L MY +C+ + +A +FDEM +AVS +I+ A+ G ++
Sbjct: 109 MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168
Query: 466 LFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDM 525
+ F ML + +P Y ++LK+ +AL++G QIH+ +I++G+ SN + + +++M
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 526 YCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTY 585
Y KCG + AK++ + + V+ ++ G++ A R+ DA K F ++ GV+ D F +
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 586 ATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPK 645
+ +L C +L + LG Q+HA + K ++S+V + + LVD Y KC + + + F++ +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 646 RDFVTWNAMICGYAHHGLGEEALKVFENMELENVKP-NHATFISVLRACAHIGLVEKGLH 704
+ V+W+A+I GY EEA+K F+++ +N N T+ S+ +AC+ + G
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 705 YFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIH 764
+ + Q S ++ + + G L+ A ++ + M D V W +S +
Sbjct: 409 VHADAIKRSLIGSQYGE-SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYY 466
Query: 765 GNVEVAEEAASSLLQ--LDPQDSSTYILLSNIYADAGM 800
GN A ++ + P +S T+I + + AG+
Sbjct: 467 GNASEALRLFEKMVSCGMKP-NSVTFIAVLTACSHAGL 503
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/638 (33%), Positives = 346/638 (54%), Gaps = 8/638 (1%)
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
MY KC++L + LF+RM ERN +S+N++I+G Q + +A++LF ++ + + + T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
YA L C +L LG LH + V + +DMY+KC + A +F+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 342 NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAV--IAGYLE- 398
S+N++I GY + G E L L + + GL L AC + G++E
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 399 GLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIA--VQ 456
G+ +H K + +I V ++LDMY K + EA +F M ++ V++NA+I+ +Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 457 AQNGNEE---ETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMG 513
+E E F+ M +EP T+ VLKAC+ + L YG QIH+ I K+
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 514 SNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYM 573
S+ F+GSALI++Y G E+ + T ++D+ SW ++I ++ E A F +
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 574 LKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNV 633
++P+++T + ++ C + A + G Q+ IK + + + ++ + MY+K GN+
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 634 QDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRAC 693
+ +F + D T++AMI A HG EAL +FE+M+ +KPN F+ VL AC
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 694 AHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVI 753
H GLV +GL YF M +DY ++P +H++C+VD+LGR+G+L+ A LI F+ V
Sbjct: 571 CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT 630
Query: 754 WRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQ 813
WR LLS C+++ + + + A L++L+P+ S +Y+LL NIY D+G+ R LMR
Sbjct: 631 WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRD 690
Query: 814 NKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKL 851
V+KEP SWI + ++ H+F V D HP + IY L
Sbjct: 691 RGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 276 bits (705), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 286/546 (52%), Gaps = 24/546 (4%)
Query: 127 EMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALK 186
E+G AR LF+ MPER++IS+NSL+SGY +G + +A+++F+E + +D ++A AL
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 187 ACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVS 246
C D D G LH + G + V + L+DMY+KC KLD ++SLF+R ER+ VS
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 247 WNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSN---LKLGTQLHA 303
WN++I+G V+ E L L M + G+ ++ S+L++C N ++ G +H
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 304 HALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQ-----N 358
+ K E D++V TA LDMYAK ++ +A K+F+ +P+ + +YNA+I G+ Q +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 359 GQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVA 418
EA +LF +Q+ GL + T S AC+ G Q+H L K+N S+ +
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 419 NSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIME 478
++++++Y + F ++D SW ++I QN E F + + +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 479 PDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKI 538
P+E+T ++ ACA AL+ G QI IKSG+ + V ++ I MY K G + A ++
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 539 LKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTC--GNLA 596
+ DV +++A+IS + + +A F M G+KP+ + +L C G L
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 597 TVGLGMQLHAQIIKQEMQSDVYIS------STLVDMYSKCGNVQDSRIMFEKSPKRDF-V 649
T GL Q M++D I+ + LVD+ + G + D+ + S +D V
Sbjct: 577 TQGLK-------YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 650 TWNAMI 655
TW A++
Sbjct: 630 TWRALL 635
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 263/550 (47%), Gaps = 45/550 (8%)
Query: 234 SLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALS 293
+ FN +++ + V+ T G Y+F+ +L Q + Y + ++ A
Sbjct: 9 TFFNNIAQDSLVTLITKRVGL--GYRFLSSL-----CQPKNTALDSEGYKILFQTAAKSG 61
Query: 294 NLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIV 353
++ LG H H +K+ + + L+MY KC + A+++F+ +P + S+N++I
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 354 GYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWS 413
GY Q G +A++LF +++ L ++ T +GA C G +HGL + + L
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 414 NICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISML 473
+ + N ++DMY KC + +A +FD + RD VSWN++I+ + G EE L M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 474 HAIMEPDEFTYGSVLKACA---GQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCG 530
+ + GSVLKAC + + GM IH K GM ++ V +AL+DMY K G
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 531 MVEEAKKILKRTEERDVVSWNAIISGFSGA-----KRSEDAHKFFSYMLKMGVKPDDFTY 585
++EA K+ ++VV++NA+ISGF + S +A K F M + G++P T+
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Query: 586 ATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPK 645
+ +L C T+ G Q+HA I K QSD +I S L+++Y+ G+ +D F + K
Sbjct: 362 SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK 421
Query: 646 RDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLH- 704
+D +W +MI + + E A +F + +++P T ++ ACA + G
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 705 -----------YFNVMLSDYSLH------------------PQLEHYSCMVDILGRSGQL 735
+ +V S S++ P + YS M+ L + G
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 736 NKALKLIQEM 745
N+AL + + M
Sbjct: 542 NEALNIFESM 551
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 152/285 (53%), Gaps = 5/285 (1%)
Query: 111 DVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDF-----SKAIDV 165
D+V AL+ YA G + A LF MP ++V+++N+++SG+L + + S+A +
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 166 FVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAK 225
F++M R +F+V LKACS + ++G Q+H K F D GSAL+++YA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 226 CKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASI 285
+D + F S+++ SW ++I VQN + A LF+ + + + T + +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 286 LRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGL 345
+ +CA + L G Q+ +A+K+ + V T+++ MYAK NM A +VF + N +
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDV 525
Query: 346 QSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSAC 390
+Y+A+I AQ+G EAL +F ++ G+ N+ G AC
Sbjct: 526 ATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 158/306 (51%), Gaps = 11/306 (3%)
Query: 480 DEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKIL 539
D Y + + A ++ G H +IKS + L++ + L++MYCKC + A+++
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 540 KRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVG 599
R ER+++S+N++ISG++ E A + F + +K D FTYA L CG +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 600 LGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYA 659
LG LH ++ + V++ + L+DMYSKCG + + +F++ +RD V+WN++I GY
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 660 HHGLGEEALKVFENMELENVKPNHATFISVLRACA---HIGLVEKGL--HYFNVMLSDYS 714
G EE L + M + + SVL+AC + G +EKG+ H + L
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL---G 282
Query: 715 LHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAA 774
+ + + ++D+ ++G L +A+KL MP + V + ++S E+ +EA+
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMIS--GFLQMDEITDEAS 339
Query: 775 SSLLQL 780
S +L
Sbjct: 340 SEAFKL 345
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 125/298 (41%), Gaps = 38/298 (12%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+P TFS + + + + G+Q HA + + F+ F+ + LI+LY
Sbjct: 355 EPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY----------- 403
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
A+ G F + ++D+ SW S++ ++ A
Sbjct: 404 --------------------ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA 443
Query: 163 IDVFVEMGRLSGMVDNRSFAVAL--KACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
D+F ++ S + + V+L AC+ G Q+ +A+K G D ++ +
Sbjct: 444 FDLFRQL--FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSI 501
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
MYAK + + +F + + +++ +I+ Q+ EAL +F+ M+ G+ +Q
Sbjct: 502 SMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQ 561
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVG--TATLDMYAKCNNMSDAQKV 336
+ +L +C + G + + +K D+ ++ T +D+ + +SDA+ +
Sbjct: 562 AFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/734 (29%), Positives = 400/734 (54%), Gaps = 3/734 (0%)
Query: 131 ARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSI 190
AR LF+ M R V +W ++S + +F+ A+ +F EM + +F+ +++C+
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 191 LEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTV 250
L D +G ++H +K GF+ + V GS+L D+Y+KC + ++ LF+ + + +SW +
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 251 IAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDF 310
I+ V K+ EAL+ + M K GV ++ T+ +L + + L L+ G +H++ +
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGI 255
Query: 311 EMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRL 370
++V++ T+ +D Y++ + M DA +V NS + + +++ G+ +N + EA+ F
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 371 LQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQ- 429
++ GL N T S S C+ + G Q+H IK + V N+++DMY KC
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 430 DVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLK 489
+EA VF M + VSW +I +G ++ + M+ +EP+ T VL+
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 490 ACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVS 549
AC+ + + ++IH+ +++ + + VG++L+D Y V+ A +++ + RD ++
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Query: 550 WNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQII 609
+ ++++ F+ + E A +YM G++ D + + NL + G LH +
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 610 KQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALK 669
K + ++LVDMYSKCG+++D++ +FE+ D V+WN ++ G A +G AL
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 670 VFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDIL 729
FE M ++ +P+ TF+ +L AC++ L + GL YF VM Y++ PQ+EHY +V IL
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGIL 675
Query: 730 GRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYI 789
GR+G+L +A +++ M + + +I++TLL C+ GN+ + E+ A+ L L P D + YI
Sbjct: 676 GRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYI 735
Query: 790 LLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDH-PKCEEIY 848
LL+++Y ++G + TR LM + ++ K+ G S + V KVH+F+ D K IY
Sbjct: 736 LLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIY 795
Query: 849 EKLGLLIGEMKWRG 862
++ + E+K G
Sbjct: 796 AEIESIKEEIKRFG 809
Score = 254 bits (648), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 191/703 (27%), Positives = 316/703 (44%), Gaps = 74/703 (10%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
T P TFS + + + + G + H +I +GF+ V + L LY KC K A
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
++F + D +SW +I +L A R+
Sbjct: 180 ELFSSLQNADTISWTMMI------------SSLVGARKWRE------------------- 208
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
A+ + EM + +G+ N V L S +FG +H + G +VV ++LVD
Sbjct: 209 ALQFYSEMVK-AGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQST 281
Y++ K++D+V + N E++ W +V++G V+N + EA+ F M+ +G+ + T
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCN-NMSDAQKVFNSL 340
Y++IL C+A+ +L G Q+H+ +K FE VG A +DMY KC+ + +A +VF ++
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
+ + S+ +I+G +G + L + K + N +TLSG AC+ + L
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
++H ++ ++ + V NS++D Y + V A +V M+RRD +++ +++ + G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGS 520
E L M + D+ + + A A AL G +H +KSG V +
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 521 ALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
+L+DMY KCG +E+AKK+ + DVVSWN ++SG + A F M +P
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 581 DDFTYATLLDTCGNLATVGLGM---QLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSR 637
D T+ LL C N LG+ Q+ +I E Q + Y+ LV + + G +
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVH--LVGILGRAGRL---- 681
Query: 638 IMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIG 697
EEA V E M L KPN F ++LRAC + G
Sbjct: 682 ---------------------------EEATGVVETMHL---KPNAMIFKTLLRACRYRG 711
Query: 698 LVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALK 740
+ G N L+ P L Y + D+ SG+ A K
Sbjct: 712 NLSLGEDMANKGLALAPSDPAL--YILLADLYDESGKPELAQK 752
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 255/498 (51%), Gaps = 7/498 (1%)
Query: 275 VGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQ 334
+G Q + IL C + S+ ++G +H +K ++ + L +Y K + + +A+
Sbjct: 20 LGNLQKSCIRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNAR 78
Query: 335 KVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIA 394
K+F+ + + + ++ +I + ++ + AL LF + SG NE T S +CA +
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 395 GYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIA 454
G +VHG IK+ N V +S+ D+Y KC EAC +F ++ D +SW +I+
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 455 VQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGS 514
E L ++ M+ A + P+EFT+ +L A + L +G IHS II G+
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPL 257
Query: 515 NLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYML 574
N+ + ++L+D Y + +E+A ++L + E+DV W +++SGF R+++A F M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 575 KMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKC--GN 632
+G++P++FTY+ +L C + ++ G Q+H+Q IK + + + LVDMY KC
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 633 VQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRA 692
V+ SR+ F + V+W +I G HG ++ + M V+PN T VLRA
Sbjct: 378 VEASRV-FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 693 CAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDV 752
C+ + V + L +L + + ++ + +VD S +++ A +I+ M D++
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNI 494
Query: 753 IWRTLLSICKIHGNVEVA 770
+ +L++ G E+A
Sbjct: 495 TYTSLVTRFNELGKHEMA 512
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/597 (36%), Positives = 330/597 (55%), Gaps = 11/597 (1%)
Query: 297 LGTQLHAHALKTD--FEM--------DVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQ 346
LG LHA +K FE ++V + L +YAKC + DA K+F+ +P +
Sbjct: 63 LGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVI 122
Query: 347 SYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLA 406
S N + G+ +N + L + + SG GF+ TL+ S C L +H LA
Sbjct: 123 SQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALA 181
Query: 407 IKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETL 466
I S I V N ++ Y KC + VFD M R+ ++ A+I+ +N E+ L
Sbjct: 182 ILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGL 241
Query: 467 FYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMY 526
F M ++ P+ TY S L AC+G Q + G QIH+ + K G+ S L + SAL+DMY
Sbjct: 242 RLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMY 301
Query: 527 CKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYA 586
KCG +E+A I + T E D VS I+ G + E+A +FF ML+ GV+ D +
Sbjct: 302 SKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS 361
Query: 587 TLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKR 646
+L ++GLG QLH+ +IK++ + ++++ L++MYSKCG++ DS+ +F + PKR
Sbjct: 362 AVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKR 421
Query: 647 DFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYF 706
++V+WN+MI +A HG G ALK++E M VKP TF+S+L AC+H+GL++KG
Sbjct: 422 NYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELL 481
Query: 707 NVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGN 766
N M + + P+ EHY+C++D+LGR+G L +A I +P + D IW+ LL C HG+
Sbjct: 482 NEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGD 541
Query: 767 VEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIG 826
EV E AA L Q P SS +IL++NIY+ G W + + T + M+ V KE G S I
Sbjct: 542 TEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIE 601
Query: 827 VNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASDVNYEKVEEHESQDGSSS 883
+ K H+F+V DK HP+ E IY+ L L M G D + + ++G+ S
Sbjct: 602 IEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRNGTVS 658
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 237/454 (52%), Gaps = 7/454 (1%)
Query: 213 VVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQK 272
+V ++L+ +YAKC KL D++ LF+ M R+ +S N V G ++N + L K M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 273 IGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSD 332
G G +T +L C + +HA A+ + ++ ++ VG + Y KC
Sbjct: 150 SG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 333 AQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAV 392
+ VF+ + + + + A+I G +N + L+LF L+++ + N +T A +AC+
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 393 IAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAI 452
+EG Q+H L K + S +C+ ++++DMY KC + +A +F+ D VS I
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 453 IAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGM 512
+ AQNG+EEE + +FI ML A +E D +VL +L G Q+HS +IK
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 513 GSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSY 572
N FV + LI+MY KCG + +++ + +R +R+ VSWN++I+ F+ A K +
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 573 MLKMGVKPDDFTYATLLDTCGNLATVGLGMQL---HAQIIKQEMQSDVYISSTLVDMYSK 629
M + VKP D T+ +LL C ++ + G +L ++ E +++ Y + ++DM +
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY--TCIIDMLGR 506
Query: 630 CGNVQDSRIMFEKSP-KRDFVTWNAMICGYAHHG 662
G +++++ + P K D W A++ + HG
Sbjct: 507 AGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 230/457 (50%), Gaps = 19/457 (4%)
Query: 112 VVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGR 171
+V WN+L+ YA G++ A LF+ MP RDVIS N + G+L + FV + R
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESG---FVLLKR 146
Query: 172 L--SGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKL 229
+ SG D+ + + L C E +H A+ G+DK++ G+ L+ Y KC
Sbjct: 147 MLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 230 DDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSC 289
+F+ MS RN ++ VI+G ++N + L+LF +M++ V + TY S L +C
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 290 AALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYN 349
+ + G Q+HA K E ++ + +A +DMY+KC ++ DA +F S S
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 350 AIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKS 409
I+VG AQNG EA+Q F + ++G+ + +S + G Q+H L IK
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR 386
Query: 410 NLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYF 469
N V N +++MY KC D+ ++ VF M +R+ VSWN++IA A++G+ L +
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 470 ISMLHAIMEPDEFTYGSVLKACA-------GQQALNYGMQIHSRIIKSGMGSNLFVGSAL 522
M ++P + T+ S+L AC+ G++ LN ++H G+ + +
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVH------GIEPRTEHYTCI 500
Query: 523 IDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISGFS 558
IDM + G+++EAK + + D W A++ S
Sbjct: 501 IDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 189/406 (46%), Gaps = 45/406 (11%)
Query: 66 KQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVR 125
K HA I+SG+ I V N LI Y KC S VFD M R+V++ A+I G
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 126 GEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVAL 185
LF M R ++ NS+ ++ AL
Sbjct: 235 ELHEDGLRLFSLM-RRGLVHPNSV------------------------------TYLSAL 263
Query: 186 KACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWV 245
ACS + G Q+H K G + ++ SAL+DMY+KC ++D+ ++F +E + V
Sbjct: 264 AACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 246 SWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHA 305
S ++ G QN EA++ F M + GV I + +++L ++L LG QLH+
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 306 LKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEAL 365
+K F + V ++MY+KC +++D+Q VF +P S+N++I +A++G G+ AL
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 366 QLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL-------QVHGLAIKSNLWSNICVA 418
+L+ + + ++T AC+ + +G +VHG+ ++ ++
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT----- 498
Query: 419 NSILDMYGKCQDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGNEE 463
I+DM G+ + EA D + + D W A++ + +G+ E
Sbjct: 499 -CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 40/303 (13%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P ++T+ + Q G+Q HA L G + + + + L+ +Y KC +++ A +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F+ + D VS ++ G A G +AI
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSE-------------------------------EEAI 342
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
F+ M + +D + L I G QLH +K F + + L++MY
Sbjct: 343 QFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMY 402
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYA 283
+KC L DS ++F RM +RN+VSWN++IA ++ + ALKL++ M + V + T+
Sbjct: 403 SKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFL 462
Query: 284 SILRSCAALSNLKLGTQL-----HAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN 338
S+L +C+ + + G +L H ++ E T +DM + + +A+ +
Sbjct: 463 SLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY----TCIIDMLGRAGLLKEAKSFID 518
Query: 339 SLP 341
SLP
Sbjct: 519 SLP 521
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/771 (30%), Positives = 410/771 (53%), Gaps = 37/771 (4%)
Query: 82 FVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNAL--IFGYAVRGEMGIARTLFEAMP 139
+ +N LI +Y++CS+L+ A KVFDKMPQR++V+ L +F Y G
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMG------------- 69
Query: 140 ERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQ 199
+SL S + +G F + F+ + ++ V + + C + Q
Sbjct: 70 -------SSLHSQIIKLGSFQ--MIFFMPLNEIASSVVELT-----RKCVSITVLKRARQ 115
Query: 200 LHCFAMKMGFDKDVVTGSA---LVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQ 256
+H + G + A L+ MY +C L+ + +F++M RN VS+N + + +
Sbjct: 116 IHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR 175
Query: 257 NYKFIE-ALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVI 315
N F A L M V + ST+ S+++ CA L ++ +G+ L++ +K + +V+
Sbjct: 176 NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV 235
Query: 316 VGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSG 375
V T+ L MY+ C ++ A+++F+ + N ++N +IVG +N + + L FR + SG
Sbjct: 236 VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 376 LGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEAC 435
+ + T S + C+ + Y G +H I S+ +++ + N++LDMY C D+ EA
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAF 355
Query: 436 HVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLH-AIMEPDEFTYGSVLKACAGQ 494
+VF + + VSWN+II+ ++NG E+ + + +L + PDE+T+ + + A A
Sbjct: 356 YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEP 415
Query: 495 QALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAII 554
+ +G +H ++ K G ++FVG+ L+ MY K E A+K+ +ERDVV W +I
Sbjct: 416 ERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475
Query: 555 SGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQ 614
G S SE A +FF M + + D F+ ++++ C ++A + G H I+
Sbjct: 476 VGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFD 535
Query: 615 SDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM 674
+ + LVDMY K G + + +F + D WN+M+ Y+ HG+ E+AL FE +
Sbjct: 536 CVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI 595
Query: 675 ELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQ 734
P+ T++S+L AC+H G +G +N M + + +HYSCMV+++ ++G
Sbjct: 596 LENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGL 654
Query: 735 LNKALKLIQEMPFEADDV-IWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSN 793
+++AL+LI++ P + +WRTLLS C N+++ AA +L+LDP+D++T+ILLSN
Sbjct: 655 VDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSN 714
Query: 794 IYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGV-NDKVHTFLVRDKDHPK 843
+YA G W+ ++ RR +R K+PG SWI V N+ F D+ +P+
Sbjct: 715 LYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 286 bits (731), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 295/584 (50%), Gaps = 34/584 (5%)
Query: 65 GKQAHARLIVSGF---KPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFG 121
+Q HA ++ +G + + +N LI +Y++C +L+ A KVFDKMP R+VVS+NAL
Sbjct: 113 ARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSA 172
Query: 122 YAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSF 181
Y+ + S A + M ++ +F
Sbjct: 173 YSRNPDFA------------------------------SYAFPLTTHMAFEYVKPNSSTF 202
Query: 182 AVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSE 241
++ C++LED G L+ +K+G+ +VV ++++ MY+ C L+ + +F+ ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 242 RNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQL 301
R+ V+WNT+I G ++N K + L F+ M GV +Q TY+ +L C+ L + LG +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 302 HAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQG 361
HA + +D D+ + A LDMY C +M +A VF + N L S+N+II G ++NG G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 362 VEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANS 420
+A+ ++ RLL+ S +E T S A SA A ++ G +HG K ++ V +
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 421 ILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPD 480
+L MY K ++ A VFD M+ RD V W +I ++ GN E + +FI M D
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSD 502
Query: 481 EFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILK 540
F+ SV+ AC+ L G H I++G + V AL+DMY K G E A+ I
Sbjct: 503 GFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFS 562
Query: 541 RTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGL 600
D+ WN+++ +S E A FF +L+ G PD TY +LL C + +
Sbjct: 563 LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQ 622
Query: 601 GMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSP 644
G L Q+ +Q +++ S +V++ SK G V ++ + E+SP
Sbjct: 623 GKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/603 (23%), Positives = 265/603 (43%), Gaps = 70/603 (11%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
KP + TF+ + Q + G ++++I G+ + V ++ +Y C +L+SA +
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
+FD + RD V+WN +I G ++ F M L+SG
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM----------LMSG---------- 295
Query: 163 IDVFVEMGRLSGMVDNRSF--AVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
VD F ++ L CS L G +H + D+ +AL+
Sbjct: 296 -------------VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALL 342
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVG-ISQ 279
DMY C + ++ +F R+ N VSWN++I+GC +N +A+ +++ + ++ +
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 280 STYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNS 339
T+++ + + A G LH K +E V VGT L MY K AQKVF+
Sbjct: 403 YTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDV 462
Query: 340 LPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEG 399
+ + + +IVG+++ G A+Q F + + + +LS AC+ +A +G
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 400 LQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
H LAI++ + V +++DMYGK A +F D WN+++ +Q+
Sbjct: 523 EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQH 582
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVG 519
G E+ L +F +L PD TY S+L AC+ + + G + +++ + G+ +
Sbjct: 583 GMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHY 642
Query: 520 SALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK 579
S ++++ K G+V+EA ++++++ G ++E
Sbjct: 643 SCMVNLVSKAGLVDEALELIEQSPP--------------GNNQAE--------------- 673
Query: 580 PDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIM 639
+ TLL C N + +G+ QI+K + + D L ++Y+ G +D M
Sbjct: 674 ----LWRTLLSACVNTRNLQIGLYAAEQILKLDPE-DTATHILLSNLYAVNGRWEDVAEM 728
Query: 640 FEK 642
K
Sbjct: 729 RRK 731
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 35/275 (12%)
Query: 41 TTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSA 100
T +P TFS + GK H ++ G++ ++FV L+ +Y K +SA
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 101 LKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFS 160
KVFD M +RDVV W +I G++ G NS L
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLG--------------------NSEL---------- 486
Query: 161 KAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
A+ F+EM R D S + + ACS + G HC A++ GFD + ALV
Sbjct: 487 -AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALV 545
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
DMY K K + + ++F+ S + WN+++ Q+ +AL F+ + + G
Sbjct: 546 DMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAV 605
Query: 281 TYASILRSC----AALSNLKLGTQLHAHALKTDFE 311
TY S+L +C + L L Q+ +K F+
Sbjct: 606 TYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/681 (31%), Positives = 373/681 (54%), Gaps = 28/681 (4%)
Query: 211 KDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKI- 269
++V + LV++Y + + F+ + R+ +WN +I+G + E ++ F +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 270 MQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNN 329
M G+ T+ S+L++C + + G ++H ALK F DV V + + +Y++
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 330 MSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSA 389
+ +A+ +F+ +P + S+NA+I GY Q+G EAL L L+ + +T+ SA
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSA 256
Query: 390 CAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSW 449
C + G+ +H +IK L S + V+N ++D+Y + + + VFD M RD +SW
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 450 NAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSV---------LKACAGQQALNYG 500
N+II N + F M + ++PD T S+ ++AC Q
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT-- 374
Query: 501 MQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGA 560
+ K ++ +G+A++ MY K G+V+ A+ + DV+SWN IISG++
Sbjct: 375 ------LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 561 KRSEDAHKFFSYMLKMG-VKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYI 619
+ +A + ++ M + G + + T+ ++L C + GM+LH +++K + DV++
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 620 SSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENV 679
++L DMY KCG ++D+ +F + P+ + V WN +I + HG GE+A+ +F+ M E V
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 680 KPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKAL 739
KP+H TF+++L AC+H GLV++G F +M +DY + P L+HY CMVD+ GR+GQL AL
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 740 KLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAG 799
K I+ M + D IW LLS C++HGNV++ + A+ L +++P+ ++LLSN+YA AG
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 800 MWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMK 859
W+ + R + +RK PG S + V++KV F ++ HP EE+Y +L L ++K
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 860 WRGCASDVNY--EKVEEHESQ 878
G D + + VE+ E +
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKE 749
Score = 270 bits (690), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 313/617 (50%), Gaps = 40/617 (6%)
Query: 90 LYIKCSNLKSA-----LKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVI 144
L+ C+NL+SA V K Q +S L+ Y G + +AR F+ + RDV
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCIS-AKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 145 SWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMV-DNRSFAVALKACSILEDGDFGVQLHCF 203
+WN ++SGY G+ S+ I F SG+ D R+F LKAC + DG+ ++HC
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGN---KIHCL 175
Query: 204 AMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEA 263
A+K GF DV ++L+ +Y++ K + ++ LF+ M R+ SWN +I+G Q+ EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 264 LKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDM 323
L L ++ + T S+L +C + G +H++++K E ++ V +D+
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 324 YAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITL 383
YA+ + D QKVF+ + L S+N+II Y N Q + A+ LF+ ++ S + + +TL
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 384 SGAFSACAVIAGYLEGLQVHGLAIKSNLW-SNICVANSILDMYGKCQDVIEACHVFDEME 442
S + + V G ++ + +I + N+++ MY K V A VF+ +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 443 RRDAVSWNAIIAVQAQNGNEEETL-FYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGM 501
D +SWN II+ AQNG E + Y I + ++ T+ SVL AC+ AL GM
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 502 QIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIIS--GFSG 559
++H R++K+G+ ++FV ++L DMY KCG +E+A + + + V WN +I+ GF G
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 560 AKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYI 619
E A F ML GVKPD T+ TLL C + V G Q + MQ+D I
Sbjct: 532 --HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-----QWCFEMMQTDYGI 584
Query: 620 SSTL------VDMYSKCGNVQDS-RIMFEKSPKRDFVTWNAMICGYAHHG---LGEEALK 669
+ +L VDMY + G ++ + + + S + D W A++ HG LG+ A
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA-- 642
Query: 670 VFENMELENVKPNHATF 686
+ L V+P H +
Sbjct: 643 ---SEHLFEVEPEHVGY 656
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 211/454 (46%), Gaps = 52/454 (11%)
Query: 20 LIASFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKP 79
+I+ + KE T + + ++T + T N G H+ I G +
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAM-DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 80 TIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMP 139
+FVSN LI LY + L+ KVFD+M RD++SWN++I Y + + A +LF+ M
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 140 ----ERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGD 195
+ D ++ SL S +GD ++AC ++
Sbjct: 341 LSRIQPDCLTLISLASILSQLGD--------------------------IRACRSVQG-- 372
Query: 196 FGVQLHCFAMKMG-FDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGC 254
F ++ G F +D+ G+A+V MYAK +D + ++FN + + +SWNT+I+G
Sbjct: 373 -------FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 255 VQNYKFIEALKLFKIMQKIG-VGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMD 313
QN EA++++ IM++ G + +Q T+ S+L +C+ L+ G +LH LK +D
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 314 VIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQK 373
V V T+ DMY KC + DA +F +P +N +I + +G G +A+ LF+ +
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 374 SGLGFNEITLSGAFSACAVIAGYLEG-----LQVHGLAIKSNLWSNICVANSILDMYGKC 428
G+ + IT SAC+ EG + I +L C ++DMYG+
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC----MVDMYGRA 601
Query: 429 QDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGN 461
+ A M + DA W A+++ +GN
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVS-GFKPTIFVSNCLIQLYIKCSNLKSA 100
KP ITF + +H + G+ + G P++ C++ +Y + L++A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 101 LKVFDKMP-QRDVVSWNALIFGYAVRGEMGIART----LFEAMPERDVISWNSLLSGYLL 155
LK M Q D W AL+ V G + + + LFE PE + ++ LLS
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH--VGYHVLLS---- 661
Query: 156 VGDFSKAIDVFVEMGRLSGMVDNRSFA 182
+++ G+ G+ + RS A
Sbjct: 662 --------NMYASAGKWEGVDEIRSIA 680
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/642 (33%), Positives = 351/642 (54%), Gaps = 9/642 (1%)
Query: 226 CKKLDDSV---SLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTY 282
C+K SV +F M++R+ WNT++ + ++ E L F M + T
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 283 ASILRSCAALSNLKLGTQLHAHALKTDFEM--DVIVGTATLDMYAKCNNMSDAQKVFNSL 340
L++C L + G +H +K D + D+ VG++ + MY KC M +A ++F+ L
Sbjct: 64 PVALKACGELREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFR-LLQKSGLGFNEITLSGAFSACAVIAGYLEG 399
+ ++++++ G+ +NG +A++ FR ++ S + + +TL SAC ++ G
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG 182
Query: 400 LQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQN 459
VHG I+ +++ + NS+L+ Y K + EA ++F + +D +SW+ +IA QN
Sbjct: 183 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 460 GNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVG 519
G E L F M+ EP+ T VL+ACA L G + H I+ G+ + + V
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 520 SALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYML-KMGV 578
+AL+DMY KC EEA + R +DVVSW A+ISGF+ + + + FS ML +
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 579 KPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRI 638
+PD +L +C L + H+ +IK S+ +I ++LV++YS+CG++ ++
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 639 MFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENM-ELENVKPNHATFISVLRACAHIG 697
+F +D V W ++I GY HG G +AL+ F +M + VKPN TF+S+L AC+H G
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 698 LVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTL 757
L+ +GL F +M++DY L P LEHY+ +VD+LGR G L+ A+++ + MPF I TL
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Query: 758 LSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVR 817
L C+IH N E+AE A L +L+ + Y+L+SN+Y G W+ + R ++Q ++
Sbjct: 543 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 602
Query: 818 KEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMK 859
K S I + KVH F+ D+ HP+ E +Y L L MK
Sbjct: 603 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 285/567 (50%), Gaps = 18/567 (3%)
Query: 131 ARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSI 190
AR +F M +R + WN+LL + + + F M R DN + VALKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 191 LEDGDFGVQLHCFAMK-MGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNT 249
L + ++G +H F K + D+ GS+L+ MY KC ++ +++ +F+ + + + V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 250 VIAGCVQNYKFIEALKLFKIM-QKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKT 308
+++G +N +A++ F+ M V + T +++ +C LSN +LG +H ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 309 DFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLF 368
F D+ + + L+ YAK +A +F + + S++ +I Y QNG EAL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 369 RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKC 428
+ G N T+ ACA +G + H LAI+ L + + V+ +++DMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 429 QDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYF-ISMLHAIMEPDEFTYGSV 487
EA VF + R+D VSW A+I+ NG ++ F I +L PD V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 488 LKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDV 547
L +C+ L HS +IK G SN F+G++L+++Y +CG + A K+ +D
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 548 VSWNAIISGFSGAKRSEDAHKFFSYMLKMG-VKPDDFTYATLLDTCGNLATVGLGMQLHA 606
V W ++I+G+ + A + F++M+K VKP++ T+ ++L C + + G+++
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 607 QIIKQ-EMQSDVYISSTLVDMYSKCGNVQDS-----RIMFEKSPKRDFVTWNAMICGYAH 660
++ + ++ + LVD+ + G++ + R+ F +P+ ++
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ----ILGTLLGACRI 548
Query: 661 HGLGEEALKVFENM-ELENVKPNHATF 686
H GE A V + + ELE+ NHA +
Sbjct: 549 HQNGEMAETVAKKLFELES---NHAGY 572
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 242/466 (51%), Gaps = 37/466 (7%)
Query: 81 IFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPE 140
++V + LI +YIKC + AL++FD++ + D+V+W++++ G+ G
Sbjct: 96 LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNG-------------- 141
Query: 141 RDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVAL-KACSILEDGDFGVQ 199
S Y +A++ F M S + +R + L AC+ L + G
Sbjct: 142 ----------SPY-------QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 200 LHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYK 259
+H F ++ GF D+ ++L++ YAK + ++V+LF ++E++ +SW+TVIA VQN
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 260 FIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTA 319
EAL +F M G + +T +L++CAA +L+ G + H A++ E +V V TA
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 320 TLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFR-LLQKSGLGF 378
+DMY KC + +A VF+ +P + S+ A+I G+ NG +++ F +L ++
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 379 NEITLSGAFSACAVIAGYLEGLQ-VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHV 437
+ I + +C+ + G+LE + H IK SN + S++++Y +C + A V
Sbjct: 365 DAILMVKVLGSCSEL-GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 438 FDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAI-MEPDEFTYGSVLKACAGQQA 496
F+ + +D V W ++I +G + L F M+ + ++P+E T+ S+L AC+
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483
Query: 497 LNYGMQIHSRIIKS-GMGSNLFVGSALIDMYCKCGMVEEAKKILKR 541
++ G++I ++ + NL + L+D+ + G ++ A +I KR
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKR 529
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 185/401 (46%), Gaps = 34/401 (8%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P +T + T G+ H +I GF + + N L+ Y K K A+ +
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F + ++DV+SW+ +I + Y+ G ++A+
Sbjct: 221 FKMIAEKDVISWSTVI-------------------------------ACYVQNGAAAEAL 249
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
VF +M + + L+AC+ D + G + H A++ G + +V +ALVDMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 224 AKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIM-QKIGVGISQSTY 282
KC +++ ++F+R+ ++ VSW +I+G N +++ F IM +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 283 ASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPN 342
+L SC+ L L+ H++ +K F+ + +G + +++Y++C ++ +A KVFN +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 343 CGLQSYNAIIVGYAQNGQGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ 401
+ ++I GY +G+G +AL+ F +++ S + NE+T SAC+ EGL+
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489
Query: 402 VHGLAIKS-NLWSNICVANSILDMYGKCQDVIEACHVFDEM 441
+ L + L N+ ++D+ G+ D+ A + M
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 45/340 (13%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
T+P T + Q G++ H I G + + VS L+ +Y+KC + + A
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
VF ++P++DVVSW ALI G+ + G + F M ++ N+ L+V
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM----LLENNTRPDAILMVK---- 371
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
L +CS L + H + +K GFD + G++LV+
Sbjct: 372 ----------------------VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIG-VGISQS 280
+Y++C L ++ +FN ++ ++ V W ++I G + K +AL+ F M K V ++
Sbjct: 410 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Query: 281 TYASILRSCAALSNLKLGTQL-----HAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQK 335
T+ SIL +C+ + G ++ + + L + E ++ +D+ + ++ A +
Sbjct: 470 TFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVL----VDLLGRVGDLDTAIE 525
Query: 336 VFNSLPNCGLQSYNAIIVGYA---QNGQGVE--ALQLFRL 370
+ +P ++G QNG+ E A +LF L
Sbjct: 526 ITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 565
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/480 (37%), Positives = 296/480 (61%), Gaps = 1/480 (0%)
Query: 390 CAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSW 449
C V ++G VH ++S +I + N++L+MY KC + EA VF++M +RD V+W
Sbjct: 70 CTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW 129
Query: 450 NAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIK 509
+I+ +Q+ + L +F ML P+EFT SV+KA A ++ G Q+H +K
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 510 SGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKF 569
G SN+ VGSAL+D+Y + G++++A+ + E R+ VSWNA+I+G + +E A +
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 570 FSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSK 629
F ML+ G +P F+YA+L C + + G +HA +IK + + +TL+DMY+K
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 630 CGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISV 689
G++ D+R +F++ KRD V+WN+++ YA HG G+EA+ FE M ++PN +F+SV
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 690 LRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEA 749
L AC+H GL+++G HY+ +M D + P+ HY +VD+LGR+G LN+AL+ I+EMP E
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 750 DDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRR 809
IW+ LL+ C++H N E+ AA + +LDP D +++L NIYA G W+ + R+
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 810 LMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASDVNY 869
M+++ V+KEP CSW+ + + +H F+ D+ HP+ EEI K ++ ++K G D ++
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 548
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 204/375 (54%), Gaps = 1/375 (0%)
Query: 282 YASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
Y ++L+ C L G +HAH L++ F D+++G L+MYAKC ++ +A+KVF +P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 342 NCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQ 401
++ +I GY+Q+ + +AL F + + G NE TLS A A G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 402 VHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGN 461
+HG +K SN+ V +++LD+Y + + +A VFD +E R+ VSWNA+IA A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 462 EEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSA 521
E+ L F ML P F+Y S+ AC+ L G +H+ +IKSG F G+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 522 LIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPD 581
L+DMY K G + +A+KI R +RDVVSWN++++ ++ ++A +F M ++G++P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 582 DFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFE 641
+ ++ ++L C + + G + + K + + + T+VD+ + G++ + E
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 642 KSP-KRDFVTWNAMI 655
+ P + W A++
Sbjct: 423 EMPIEPTAAIWKALL 437
Score = 206 bits (524), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 219/408 (53%), Gaps = 5/408 (1%)
Query: 177 DNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLF 236
D R + LK C++ + G +H ++ F D+V G+ L++MYAKC L+++ +F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 237 NRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLK 296
+M +R++V+W T+I+G Q+ + +AL F M + G ++ T +S++++ AA
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 297 LGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYA 356
G QLH +K F+ +V VG+A LD+Y + M DAQ VF++L + S+NA+I G+A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 357 QNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLE-GLQVHGLAIKSNLWSNI 415
+ +AL+LF+ + + G + + + F AC+ G+LE G VH IKS
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS-TGFLEQGKWVHAYMIKSGEKLVA 297
Query: 416 CVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHA 475
N++LDMY K + +A +FD + +RD VSWN+++ AQ+G +E +++F M
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 476 IMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEA 535
+ P+E ++ SVL AC+ L+ G + + K G+ + ++D+ + G + A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 536 KKILKRTE-ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDD 582
+ ++ E W A+++ K +E ++ ++ PDD
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL--DPDD 463
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 200/400 (50%), Gaps = 32/400 (8%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
G+ HA ++ S F+ I + N L+ +Y KC +L+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE------------------------- 113
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
AR +FE MP+RD ++W +L+SGY A+ F +M R + + +
Sbjct: 114 ------ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNW 244
+KA + G G QLH F +K GFD +V GSAL+D+Y + +DD+ +F+ + RN
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 245 VSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAH 304
VSWN +IAG + +AL+LF+ M + G S +YAS+ +C++ L+ G +HA+
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 305 ALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEA 364
+K+ ++ G LDMYAK ++ DA+K+F+ L + S+N+++ YAQ+G G EA
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 365 LQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDM 424
+ F +++ G+ NEI+ +AC+ EG + L K + +++D+
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 425 YGKCQDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGNEE 463
G+ D+ A +EM A W A++ + N E
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 165/288 (57%), Gaps = 6/288 (2%)
Query: 480 DEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKIL 539
D Y ++LK C + L G +H+ I++S ++ +G+ L++MY KCG +EEA+K+
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 540 KRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVG 599
++ +RD V+W +ISG+S R DA FF+ ML+ G P++FT ++++
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 600 LGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYA 659
G QLH +K S+V++ S L+D+Y++ G + D++++F+ R+ V+WNA+I G+A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 660 HHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQL 719
E+AL++F+ M + +P+H ++ S+ AC+ G +E+G M+ +L
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE---KL 295
Query: 720 EHYS--CMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHG 765
++ ++D+ +SG ++ A K+ + + D V W +LL+ HG
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 37/301 (12%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P T S + + ++ G Q H + GF + V + L+ LY + + A V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
FD + R+ VSWNALI G+A R SG KA+
Sbjct: 219 FDALESRNDVSWNALIAGHARR-------------------------SGT------EKAL 247
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACS---ILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
++F M R + S+A ACS LE G + +H + +K G G+ L+
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW---VHAYMIKSGEKLVAFAGNTLL 304
Query: 221 DMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
DMYAK + D+ +F+R+++R+ VSWN+++ Q+ EA+ F+ M+++G+ ++
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
++ S+L +C+ L G + K + +D+ + +++ A + +
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Query: 341 P 341
P
Sbjct: 425 P 425
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 66/308 (21%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
+P +++ +F + GK HA +I SG K F N L+ +Y K ++ A K
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
+FD++ +RDVVSWN+L+ YA G G ++ + W
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHG-FG-----------KEAVWW---------------- 350
Query: 163 IDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDM 222
F EM R+ + SF L ACS D G + K G + +VD+
Sbjct: 351 ---FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 223 YAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTY 282
+ L+ ++ +FIE ++ + + + +
Sbjct: 408 LGRAGDLNRAL-------------------------RFIE---------EMPIEPTAAIW 433
Query: 283 ASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPN 342
++L +C N +LG H + D + D ++YA +DA +V +
Sbjct: 434 KALLNACRMHKNTELGAYAAEHVFELDPD-DPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 343 CGLQSYNA 350
G++ A
Sbjct: 493 SGVKKEPA 500
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 337/608 (55%), Gaps = 20/608 (3%)
Query: 277 ISQSTYAS-----ILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMS 331
++ STY S + C LS + A + E +V + YAK + +
Sbjct: 39 VASSTYLSNHFVNLYSKCGRLSYARA-------AFYSTEEPNVFSYNVIVKAYAKDSKIH 91
Query: 332 DAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACA 391
A+++F+ +P SYN +I GYA + A+ LF+ ++K G + TLSG +AC
Sbjct: 92 IARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC 151
Query: 392 VIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEM-ERRDAVSWN 450
++ Q+H ++ S V N+ + Y K + EA VF M E RD VSWN
Sbjct: 152 DRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 451 AIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS 510
++I Q+ + L + M+ + D FT SVL A L G Q H ++IK+
Sbjct: 210 SMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA 269
Query: 511 GMGSNLFVGSALIDMYCKCGMVE---EAKKILKRTEERDVVSWNAIISGFS-GAKRSEDA 566
G N VGS LID Y KCG + +++K+ + D+V WN +ISG+S + SE+A
Sbjct: 270 GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEA 329
Query: 567 HKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSD-VYISSTLVD 625
K F M ++G +PDD ++ + C NL++ Q+H IK + S+ + +++ L+
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALIS 389
Query: 626 MYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHAT 685
+Y K GN+QD+R +F++ P+ + V++N MI GYA HG G EAL +++ M + PN T
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 686 FISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEM 745
F++VL ACAH G V++G YFN M + + P+ EHYSCM+D+LGR+G+L +A + I M
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 746 PFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLS 805
P++ V W LL C+ H N+ +AE AA+ L+ + P ++ Y++L+N+YADA W++++
Sbjct: 510 PYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMA 569
Query: 806 YTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCAS 865
R+ MR ++RK+PGCSWI V K H F+ D HP E+ E L ++ +MK G
Sbjct: 570 SVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVM 629
Query: 866 DVNYEKVE 873
D + V+
Sbjct: 630 DKKWAMVK 637
Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 279/521 (53%), Gaps = 10/521 (1%)
Query: 42 TKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSAL 101
T K TF + + ++ GK HA + S + ++SN + LY KC L A
Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 102 KVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSK 161
F + +V S+N ++ YA ++ IAR LF+ +P+ D +S+N+L+SGY +
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 162 AIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVD 221
A+ +F M +L VD + + + AC + D QLHCF++ GFD +A V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 222 MYAKCKKLDDSVSLFNRMSE-RNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQS 280
Y+K L ++VS+F M E R+ VSWN++I Q+ + +AL L+K M G I
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMF 241
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAK---CNNMSDAQKVF 337
T AS+L + +L +L G Q H +K F + VG+ +D Y+K C+ M D++KVF
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 338 NSLPNCGLQSYNAIIVGYAQNGQ-GVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGY 396
+ + L +N +I GY+ N + EA++ FR +Q+ G ++ + SAC+ ++
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 397 LEGLQVHGLAIKSNLWSN-ICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAV 455
+ Q+HGLAIKS++ SN I V N+++ +Y K ++ +A VFD M +AVS+N +I
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 456 QAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGS 514
AQ+G+ E L + ML + + P++ T+ +VL ACA ++ G + + + ++ +
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 515 NLFVGSALIDMYCKCGMVEEAKKILKRTEERD-VVSWNAII 554
S +ID+ + G +EEA++ + + V+W A++
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 152/344 (44%), Gaps = 46/344 (13%)
Query: 483 TYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRT 542
T+ +L ++ L G +H+ +KS + S+ ++ + +++Y KCG + A+ T
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 543 EE-------------------------------RDVVSWNAIISGFSGAKRSEDAHKFFS 571
EE D VS+N +ISG++ A+ + A F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 572 YMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCG 631
M K+G + D FT + L+ C + V L QLH + S +++ V YSK G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 632 NVQDS-RIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVL 690
++++ + + RD V+WN+MI Y H G +AL +++ M + K + T SVL
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 691 RACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSG---QLNKALKLIQEMPF 747
A + + G F+ L H S ++D + G + + K+ QE+
Sbjct: 248 NALTSLDHLIGGRQ-FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-L 305
Query: 748 EADDVIWRTLLSICKIHGNVEVAEEAASSLLQLD-----PQDSS 786
D V+W T++S + N E++EEA S Q+ P D S
Sbjct: 306 SPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGHRPDDCS 347
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/640 (33%), Positives = 349/640 (54%), Gaps = 40/640 (6%)
Query: 279 QSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCN--NMSDAQKV 336
+S + S++ C +L LK Q H H ++T D + M A + ++ A+KV
Sbjct: 30 RSRHISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKV 86
Query: 337 FNSLPNCGLQSYNAIIVGYAQNGQGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAG 395
F+ +P ++N +I YA V ++ F ++ +S N+ T A A ++
Sbjct: 87 FDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSS 146
Query: 396 YLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAV 455
G +HG+A+KS + S++ VANS++ Y C D+ AC VF ++ +D VSWN++I
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 456 QAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSN 515
Q G+ ++ L F M ++ T VL ACA + L +G Q+ S I ++ + N
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 516 LFVGSALIDMYCKCGMVEEAKKILKRTEERD----------------------------- 546
L + +A++DMY KCG +E+AK++ EE+D
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 547 --VVSWNAIISGFS-GAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQ 603
+V+WNA+IS + K +E F L+ +K + T + L C + + LG
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 604 LHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGL 663
+H+ I K ++ + +++S L+ MYSKCG+++ SR +F KRD W+AMI G A HG
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 664 GEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYS 723
G EA+ +F M+ NVKPN TF +V AC+H GLV++ F+ M S+Y + P+ +HY+
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 506
Query: 724 CMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQ 783
C+VD+LGRSG L KA+K I+ MP +W LL CKIH N+ +AE A + LL+L+P+
Sbjct: 507 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Query: 784 DSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPK 843
+ ++LLSNIYA G W+ +S R+ MR ++KEPGCS I ++ +H FL D HP
Sbjct: 567 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 626
Query: 844 CEEIYEKLGLLIGEMKWRGCASDVN--YEKVEEHESQDGS 881
E++Y KL ++ ++K G +++ + +EE E ++ S
Sbjct: 627 SEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQS 666
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 248/543 (45%), Gaps = 70/543 (12%)
Query: 131 ARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNR-SFAVALKACS 189
AR +F+ +P+ + +WN+L+ Y D +I F++M S N+ +F +KA +
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 190 ILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNT 249
+ G LH A+K DV ++L+ Y C LD + +F + E++ VSWN+
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 250 VIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTD 309
+I G VQ +AL+LFK M+ V S T +L +CA + NL+ G Q+ ++ +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 310 FEMDVIVGTATLDMYAKCNNMSDAQKVF-------------------------------N 338
+++ + A LDMY KC ++ DA+++F N
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 339 SLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQ-KSGLGFNEITLSGAFSACAVIAGYL 397
S+P + ++NA+I Y QNG+ EAL +F LQ + + N+ITL SACA +
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 398 EGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQA 457
G +H K + N V ++++ MY KC D+ ++ VF+ +E+RD W+A+I A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 458 QNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLF 517
+G E + F M A ++P+ T+ +V AC+ + G+ + + M SN
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS-----HTGLVDEAESLFHQMESNY- 496
Query: 518 VGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMG 577
G+V E K + I+ + E A KF M
Sbjct: 497 ------------GIVPEEKH------------YACIVDVLGRSGYLEKAVKFIE---AMP 529
Query: 578 VKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCG---NVQ 634
+ P + LL C A + L ++++ E ++D L ++Y+K G NV
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND-GAHVLLSNIYAKLGKWENVS 588
Query: 635 DSR 637
+ R
Sbjct: 589 ELR 591
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 63/380 (16%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P TF + + + + G+ H + S +FV+N LI Y C +L SA KV
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F + E+DV+SWNS+++G++ G KA+
Sbjct: 189 -------------------------------FTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMY 223
++F +M + + L AC+ + + +FG Q+ + + + ++ +A++DMY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 224 AKCKKLDDSVSLFNRMSERN---W----------------------------VSWNTVIA 252
KC ++D+ LF+ M E++ W V+WN +I+
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 253 GCVQNYKFIEALKLFKIMQ-KIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFE 311
QN K EAL +F +Q + + ++Q T S L +CA + L+LG +H++ K
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 312 MDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLL 371
M+ V +A + MY+KC ++ +++VFNS+ + ++A+I G A +G G EA+ +F +
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 372 QKSGLGFNEITLSGAFSACA 391
Q++ + N +T + F AC+
Sbjct: 458 QEANVKPNGVTFTNVFCACS 477
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/627 (33%), Positives = 333/627 (53%), Gaps = 4/627 (0%)
Query: 199 QLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNY 258
Q H G D+ + LV +Y D+ +F+++ E ++ W ++ N
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 259 KFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGT 318
+ +E +KL+ ++ K G ++ L++C L +L G ++H +K D +V T
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLT 180
Query: 319 ATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGF 378
LDMYAKC + A KVFN + + + ++I GY +N E L LF ++++ +
Sbjct: 181 GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 379 NEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVF 438
NE T AC ++ +G HG +KS + + C+ S+LDMY KC D+ A VF
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 439 DEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALN 498
+E D V W A+I NG+ E L F M ++P+ T SVL C + L
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLE 360
Query: 499 YGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFS 558
G +H IK G+ + V +AL+ MY KC +AK + + E+D+V+WN+IISGFS
Sbjct: 361 LGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 559 GAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEM--QSD 616
+A F M V P+ T A+L C +L ++ +G LHA +K S
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS 479
Query: 617 VYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMEL 676
V++ + L+D Y+KCG+ Q +R++F+ +++ +TW+AMI GY G +L++FE M
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Query: 677 ENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLN 736
+ KPN +TF S+L AC H G+V +G YF+ M DY+ P +HY+CMVD+L R+G+L
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 737 KALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYA 796
+AL +I++MP + D + L C +H ++ E +L L P D+S Y+L+SN+YA
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
Query: 797 DAGMWDKLSYTRRLMRQNKVRKEPGCS 823
G W++ R LM+Q + K G S
Sbjct: 660 SDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 203/655 (30%), Positives = 342/655 (52%), Gaps = 33/655 (5%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P+ ++F+ I +EL + +N G H S C + L KC+N+ S +
Sbjct: 17 PRCVSFTTI-KELILTE-ENDGSSLHYAA----------SSPCFL-LLSKCTNIDSLRQS 63
Query: 104 FDKMPQR----DVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDF 159
+ D+ L+ Y G AR +F+ +PE D W +L Y L +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 160 SKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKM-GFDKDVVTGSA 218
+ + ++ + + D+ F+ ALKAC+ L+D D G ++HC +K+ FD V+TG
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-- 181
Query: 219 LVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGIS 278
L+DMYAKC ++ + +FN ++ RN V W ++IAG V+N E L LF M++ V +
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 279 QSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN 338
+ TY +++ +C LS L G H +K+ E+ + T+ LDMY KC ++S+A++VFN
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 339 SLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLE 398
+ L + A+IVGY NG EAL LF+ ++ + N +T++ S C +I
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 399 GLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQ 458
G VHGL+IK +W + VAN+++ MY KC +A +VF+ +D V+WN+II+ +Q
Sbjct: 362 GRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 459 NGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGM--GSNL 516
NG+ E LF F M + P+ T S+ ACA +L G +H+ +K G S++
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 517 FVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKM 576
VG+AL+D Y KCG + A+ I EE++ ++W+A+I G+ + + + F MLK
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 577 GVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQ-EMQSDVYISSTLVDMYSKCGNVQD 635
KP++ T+ ++L CG+ V G + + + K + +VDM ++ G ++
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 636 SRIMFEKSP-KRDFVTWNAMICGYAHHG---LGEEALKVFENMELENVKPNHATF 686
+ + EK P + D + A + G H LGE +K ++ ++ P+ A++
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK-----KMLDLHPDDASY 650
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 254/547 (46%), Gaps = 39/547 (7%)
Query: 47 ITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDK 106
I FS+ + T Q + GK+ H +L+ K
Sbjct: 143 IVFSKALKACTELQDLDNGKKIHCQLV--------------------------------K 170
Query: 107 MPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVF 166
+P D V L+ YA GE+ A +F + R+V+ W S+++GY+ + + +F
Sbjct: 171 VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 167 VEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKC 226
M + + + ++ + AC+ L G H +K G + ++L+DMY KC
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC 290
Query: 227 KKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASIL 286
+ ++ +FN S + V W +I G N EAL LF+ M+ + + + T AS+L
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 287 RSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQ 346
C + NL+LG +H ++K D V A + MYAKC DA+ VF +
Sbjct: 351 SGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 347 SYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLA 406
++N+II G++QNG EAL LF + + N +T++ FSACA + G +H +
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 407 IKSNLW--SNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEE 464
+K S++ V ++LD Y KC D A +FD +E ++ ++W+A+I + G+
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIG 529
Query: 465 TLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSALI 523
+L F ML +P+E T+ S+L AC +N G + S + K + + ++
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMV 589
Query: 524 DMYCKCGMVEEAKKILKRTE-ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDD 582
DM + G +E+A I+++ + DV + A + G R + ML + PDD
Sbjct: 590 DMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDL--HPDD 647
Query: 583 FTYATLL 589
+Y L+
Sbjct: 648 ASYYVLV 654
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 344/658 (52%), Gaps = 52/658 (7%)
Query: 268 KIMQKIGVGI-SQSTY-----ASILRSCAALSNLKLGTQLHAHALKTDF----------- 310
+I Q IG+G +QS Y +I+R+ +HA+AL
Sbjct: 9 QIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIP 68
Query: 311 EMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRL 370
+ ++ L Y+K +S+ + F LP+ ++N +I GY+ +G A++ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 371 LQKS-GLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGK-- 427
+ + +TL + G Q+HG IK S + V + +L MY
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 428 -----------------------------CQDVIEACHVFDEMERRDAVSWNAIIAVQAQ 458
C + +A +F ME+ D+VSW A+I AQ
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQ 247
Query: 459 NGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFV 518
NG +E + F M ++ D++ +GSVL AC G A+N G QIH+ II++ +++V
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 519 GSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGV 578
GSALIDMYCKC + AK + R ++++VVSW A++ G+ R+E+A K F M + G+
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 579 KPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRI 638
PD +T + C N++++ G Q H + I + V +S++LV +Y KCG++ DS
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 639 MFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGL 698
+F + RD V+W AM+ YA G E +++F+ M +KP+ T V+ AC+ GL
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 699 VEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLL 758
VEKG YF +M S+Y + P + HYSCM+D+ RSG+L +A++ I MPF D + W TLL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 759 SICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRK 818
S C+ GN+E+ + AA SL++LDP + Y LLS+IYA G WD ++ RR MR+ V+K
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 819 EPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASDVNY--EKVEE 874
EPG SWI K+H+F D+ P ++IY KL L ++ G D ++ VEE
Sbjct: 608 EPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEE 665
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 274/525 (52%), Gaps = 37/525 (7%)
Query: 66 KQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVR 125
K H +I + P F+ N ++ Y + A +VFD++PQ ++ SWN L+ Y+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 126 GEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGR-LSGMVDNRSFAVA 184
G + + FE +P+RD ++WN L+ GY L G A+ + M R S + +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAK------------------- 225
LK S G Q+H +K+GF+ ++ GS L+ MYA
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 226 ------------CKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKI 273
C ++D++ LF M E++ VSW +I G QN EA++ F+ M+
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 274 GVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDA 333
G+ + Q + S+L +C L + G Q+HA ++T+F+ + VG+A +DMY KC + A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 334 QKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVI 393
+ VF+ + + S+ A++VGY Q G+ EA+++F +Q+SG+ + TL A SACA +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 394 AGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAII 453
+ EG Q HG AI S L + V+NS++ +YGKC D+ ++ +F+EM RDAVSW A++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 454 AVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMG 513
+ AQ G ET+ F M+ ++PD T V+ AC+ + G Q + +++ S G
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFKLMTSEYG 503
Query: 514 SNLFVG--SALIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIIS 555
+G S +ID++ + G +EEA + + D + W ++S
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 210/402 (52%), Gaps = 5/402 (1%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
GKQ H ++I GF+ + V + L+ +Y + A KVF + R+ V +N+L+ G
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVA 184
G + A LF M E+D +SW +++ G G +AI+ F EM +D F
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 185 LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNW 244
L AC L + G Q+H ++ F + GSAL+DMY KCK L + ++F+RM ++N
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 245 VSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAH 304
VSW ++ G Q + EA+K+F MQ+ G+ T + +CA +S+L+ G+Q H
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 305 ALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEA 364
A+ + V V + + +Y KC ++ D+ ++FN + S+ A++ YAQ G+ VE
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 365 LQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKS--NLWSNICVANSIL 422
+QLF + + GL + +TL+G SAC+ AG +E Q + + S + +I + ++
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSR-AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 423 DMYGKCQDVIEACHVFDEME-RRDAVSWNAIIAVQAQNGNEE 463
D++ + + EA + M DA+ W +++ GN E
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 34/283 (12%)
Query: 61 AQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIF 120
A N GKQ HA +I + F+ I+V + LI +Y KC L A VFD+M Q++VVSW A++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 121 GYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRS 180
GY G+ G A +A+ +F++M R D+ +
Sbjct: 345 GY---GQTGRAE----------------------------EAVKIFLDMQRSGIDPDHYT 373
Query: 181 FAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMS 240
A+ AC+ + + G Q H A+ G V ++LV +Y KC +DDS LFN M+
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 241 ERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQ 300
R+ VSW +++ Q + +E ++LF M + G+ T ++ +C+ ++ G Q
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-Q 492
Query: 301 LHAHALKTDFEMDVIVG--TATLDMYAKCNNMSDAQKVFNSLP 341
+ + +++ + +G + +D++++ + +A + N +P
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P T + + + G Q H + I SG + VSN L+ LY KC ++ + ++
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F++M RD VSW A++ YA G LF+ M + + L+G
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG----------- 477
Query: 164 DVFVEMGRLSGMVDNRSFAVALKACS---ILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
+ ACS ++E G +L + G + S ++
Sbjct: 478 --------------------VISACSRAGLVEKGQRYFKL--MTSEYGIVPSIGHYSCMI 515
Query: 221 DMYAKCKKLDDSVSLFNRMS-ERNWVSWNTVIAGC 254
D++++ +L++++ N M + + W T+++ C
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 342/652 (52%), Gaps = 72/652 (11%)
Query: 299 TQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQN 358
TQ HA LK+ + D + + Y+ N +DA V S+P+ + S++++I +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 359 GQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVA 418
+++ +F + GL + L F CA ++ + G Q+H ++ S L + V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 419 NSILDMYGKCQDVIEACHVFDEMERRDAV------------------------------- 447
S+ MY +C + +A VFD M +D V
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 448 ----SWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQI 503
SWN I++ ++G +E + F + H PD+ T SVL + + LN G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 504 HSRIIKSGMGSNLFVGSALIDMYCKCG-------------------------------MV 532
H +IK G+ + V SA+IDMY K G +V
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 533 EEAKKILK----RTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATL 588
++A ++ + +T E +VVSW +II+G + + +A + F M GVKP+ T ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 589 LDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDF 648
L CGN+A +G G H ++ + +V++ S L+DMY+KCG + S+I+F P ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 649 VTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVEKGLHYFNV 708
V WN+++ G++ HG +E + +FE++ +KP+ +F S+L AC +GL ++G YF +
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 709 MLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVE 768
M +Y + P+LEHYSCMV++LGR+G+L +A LI+EMPFE D +W LL+ C++ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 769 VAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVN 828
+AE AA L L+P++ TY+LLSNIYA GMW ++ R M ++K PGCSWI V
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 829 DKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGCASDVNY--EKVEEHESQ 878
++V+T L DK HP+ ++I EK+ + EM+ G ++++ VEE E +
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQE 686
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/594 (23%), Positives = 252/594 (42%), Gaps = 103/594 (17%)
Query: 34 KTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIK 93
K P I P++I + + QAHAR++ SG + ++S LI Y
Sbjct: 3 KQVLPLIEKIPQSIVGFLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASY-- 60
Query: 94 CSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGY 153
S F+ A + +++P+ + S++SL+
Sbjct: 61 -----SNYNCFND------------------------ADLVLQSIPDPTIYSFSSLIYAL 91
Query: 154 LLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDV 213
F+++I VF M + D+ K C+ L G Q+HC + G D D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 214 VTGSALVDMYAKCKKLDDSVSLFNRMSER------------------------------- 242
++ MY +C ++ D+ +F+RMS++
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 243 ----NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLG 298
N VSWN +++G ++ EA+ +F+ + +G Q T +S+L S L +G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 299 TQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN---------------SLPNC 343
+H + +K D V +A +DMY K ++ +FN L
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 344 GL--------------------QSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITL 383
GL S+ +II G AQNG+ +EAL+LFR +Q +G+ N +T+
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 384 SGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMER 443
AC IA G HG A++ +L N+ V ++++DMY KC + + VF+ M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 444 RDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQI 503
++ V WN+++ + +G +E + F S++ ++PD ++ S+L AC + G +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 504 HSRIIKS-GMGSNLFVGSALIDMYCKCGMVEEAKKILKRTE-ERDVVSWNAIIS 555
+ + G+ L S ++++ + G ++EA ++K E D W A+++
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/742 (30%), Positives = 367/742 (49%), Gaps = 102/742 (13%)
Query: 142 DVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLH 201
D+ WN +S Y+ G ++A+ VF M R S
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS--------------------------- 95
Query: 202 CFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFI 261
V+ + ++ Y + + + + LF+ M ER+ VSWN +I G V+N
Sbjct: 96 ------------VSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLG 143
Query: 262 EALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATL 321
+A +LF+IM E DV L
Sbjct: 144 KARELFEIMP---------------------------------------ERDVCSWNTML 164
Query: 322 DMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEI 381
YA+ + DA+ VF+ +P S+NA++ Y QN + EA LF+ + L
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 382 TLSGAFSACAVIAG--YLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFD 439
L G ++ + + + V ++ N+I+ Y + + EA +FD
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVR----------DVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 440 EMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKA-CAGQQALN 498
E +D +W A+++ QN EE F M E +E ++ ++L G++
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGER--- 327
Query: 499 YGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFS 558
M++ + N+ + +I Y +CG + EAK + + +RD VSW A+I+G+S
Sbjct: 328 --MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 559 GAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVY 618
+ S +A + F M + G + + ++++ L TC ++ + LG QLH +++K ++ +
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 619 ISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELEN 678
+ + L+ MY KCG+++++ +F++ +D V+WN MI GY+ HG GE AL+ FE+M+ E
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 679 VKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKA 738
+KP+ AT ++VL AC+H GLV+KG YF M DY + P +HY+CMVD+LGR+G L A
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 739 LKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADA 798
L++ MPFE D IW TLL ++HGN E+AE AA + ++P++S Y+LLSN+YA +
Sbjct: 566 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 625
Query: 799 GMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEM 858
G W + R MR V+K PG SWI + +K HTF V D+ HP+ +EI+ L L M
Sbjct: 626 GRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRM 685
Query: 859 KWRGCAS--DVNYEKVEEHESQ 878
K G S V VEE E +
Sbjct: 686 KKAGYVSKTSVVLHDVEEEEKE 707
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 298/605 (49%), Gaps = 72/605 (11%)
Query: 85 NCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVI 144
N I Y++ AL+VF +MP+ VS+N +I GY GE +AR LF+ MPERD++
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 145 SWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFA 204
SWN ++ GY+ + KA ++F M
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMP---------------------------------- 153
Query: 205 MKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEAL 264
++DV + + ++ YA+ +DD+ S+F+RM E+N VSWN +++ VQN K EA
Sbjct: 154 -----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC 208
Query: 265 KLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEM-DVIVGTATLDM 323
LFK S+ +A + +C +K + A + DV+ +
Sbjct: 209 MLFK---------SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITG 259
Query: 324 YAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITL 383
YA+ + +A+++F+ P + ++ A++ GY QN EA +LF + + NE++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSW 315
Query: 384 SGAFSACAVIAGYLEGLQVHGLAIKSNLWS-----NICVANSILDMYGKCQDVIEACHVF 438
+ A++AGY++G + + + L+ N+ N+++ Y +C + EA ++F
Sbjct: 316 N------AMLAGYVQGER---MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 439 DEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALN 498
D+M +RD VSW A+IA +Q+G+ E L F+ M + ++ S L CA AL
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 499 YGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFS 558
G Q+H R++K G + FVG+AL+ MYCKCG +EEA + K +D+VSWN +I+G+S
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 559 GAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQ-EMQSDV 617
E A +FF M + G+KPDD T +L C + V G Q + + + +
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 618 YISSTLVDMYSKCGNVQDSRIMFEKSP-KRDFVTWNAMICGYAHHG---LGEEALKVFEN 673
+ +VD+ + G ++D+ + + P + D W ++ HG L E A
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 606
Query: 674 MELEN 678
ME EN
Sbjct: 607 MEPEN 611
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 153/295 (51%), Gaps = 36/295 (12%)
Query: 81 IFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNA----------------------- 117
+F ++ YI+ ++ A ++FDKMP+R+ VSWNA
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 118 --------LIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEM 169
+I GYA G++ A+ LF+ MP+RD +SW ++++GY G +A+ +FV+M
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 170 GRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKL 229
R G ++ SF+ AL C+ + + G QLH +K G++ G+AL+ MY KC +
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 230 DDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIE-ALKLFKIMQKIGVGISQSTYASILRS 288
+++ LF M+ ++ VSWNT+IAG + F E AL+ F+ M++ G+ +T ++L +
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAG-YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 289 CAALSNLKLGTQLHAHALKTDFEM--DVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
C+ + G Q + + + D+ + + +D+ + + DA + ++P
Sbjct: 520 CSHTGLVDKGRQ-YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
GKQ H RL+ G++ FV N L+ +Y KC +++ A +F +M +D+VSWN +I GY+
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 125 RGEMGIARTLFEAMPER----DVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRS 180
G +A FE+M D + ++LS G K F M + G++ N
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 181 FAVA----LKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALV 220
L +LED H M F+ D L+
Sbjct: 548 HYACMVDLLGRAGLLEDA------HNLMKNMPFEPDAAIWGTLL 585
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 329/577 (57%), Gaps = 4/577 (0%)
Query: 279 QSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN 338
+ SILR C G Q+H + LK+ +++I +DMY KC A KVF+
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 339 SLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLE 398
S+P + S++A++ G+ NG +L LF + + G+ NE T S AC ++ +
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 399 GLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIA--VQ 456
GLQ+HG +K + V NS++DMY KC + EA VF + R +SWNA+IA V
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 457 AQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGM--GS 514
A G++ F + + PDEFT S+LKAC+ + G QIH +++SG S
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 515 NLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYML 574
+ + +L+D+Y KCG + A+K + +E+ ++SW+++I G++ +A F +
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 575 KMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQ 634
++ + D F ++++ + A + G Q+ A +K + + +++VDMY KCG V
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 635 DSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACA 694
++ F + +D ++W +I GY HGLG++++++F M N++P+ +++VL AC+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 695 HIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIW 754
H G++++G F+ +L + + P++EHY+C+VD+LGR+G+L +A LI MP + + IW
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 755 RTLLSICKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQN 814
+TLLS+C++HG++E+ +E LL++D ++ + Y+++SN+Y AG W++ R L
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 815 KVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKL 851
++KE G SW+ + +VH F + HP I E L
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETL 582
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 184/667 (27%), Positives = 334/667 (50%), Gaps = 57/667 (8%)
Query: 52 IFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRD 111
I + T + G Q H L+ SG + SN LI +Y KC A KVFD
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD------ 65
Query: 112 VVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGR 171
+MPER+V+SW++L+SG++L GD ++ +F EMGR
Sbjct: 66 -------------------------SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 100
Query: 172 LSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDD 231
+ +F+ LKAC +L + G+Q+H F +K+GF+ V G++LVDMY+KC ++++
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 232 SVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVG--ISQSTYASILRSC 289
+ +F R+ +R+ +SWN +IAG V +AL F +MQ+ + + T S+L++C
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 220
Query: 290 AALSNLKLGTQLHAHALKTDFE--MDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQS 347
++ + G Q+H +++ F + + +D+Y KC + A+K F+ + + S
Sbjct: 221 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 280
Query: 348 YNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAI 407
++++I+GYAQ G+ VEA+ LF+ LQ+ + LS A A +G Q+ LA+
Sbjct: 281 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 340
Query: 408 KSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLF 467
K V NS++DMY KC V EA F EM+ +D +SW +I ++G ++++
Sbjct: 341 KLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVR 400
Query: 468 YFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVGSALIDMY 526
F ML +EPDE Y +VL AC+ + G ++ S+++++ G+ + + ++D+
Sbjct: 401 IFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 460
Query: 527 CKCGMVEEAKKILKRTE-ERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK-PDDFT 584
+ G ++EAK ++ + +V W ++S E + +L++ K P ++
Sbjct: 461 GRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYV 520
Query: 585 YATLL-------DTCGNLATVG--LGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQD 635
+ L + GN +G G++ A + E++ +V+ + D + +Q+
Sbjct: 521 MMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQE 580
Query: 636 SRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAH 695
+ E+ + + GY +GL E + + + EN++ H+ +++ A A
Sbjct: 581 TLKEAERRLREEL--------GYV-YGLKHELHDIDDESKEENLRA-HSEKLAIGLALAT 630
Query: 696 IGLVEKG 702
GL +KG
Sbjct: 631 GGLNQKG 637
Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 203/433 (46%), Gaps = 51/433 (11%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P TFS + A G Q H + GF+ + V N L+ +Y KC + A KV
Sbjct: 105 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 164
Query: 104 FDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAI 163
F ++ R ++SWNA+I +G++ G SKA+
Sbjct: 165 FRRIVDRSLISWNAMI-------------------------------AGFVHAGYGSKAL 193
Query: 164 DVF--VEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGF---DKDVVTGSA 218
D F ++ + D + LKACS G Q+H F ++ GF +TGS
Sbjct: 194 DTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS- 252
Query: 219 LVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGIS 278
LVD+Y KC L + F+++ E+ +SW+++I G Q +F+EA+ LFK +Q++ I
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 279 QSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFN 338
+SI+ A + L+ G Q+ A A+K ++ V + +DMY KC + +A+K F
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 339 SLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLE 398
+ + S+ +I GY ++G G +++++F + + + +E+ SAC+ E
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 399 G-------LQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVS-WN 450
G L+ HG IK + CV +D+ G+ + EA H+ D M + V W
Sbjct: 433 GEELFSKLLETHG--IKPRVEHYACV----VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486
Query: 451 AIIAVQAQNGNEE 463
++++ +G+ E
Sbjct: 487 TLLSLCRVHGDIE 499
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 23 SFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGF--KPT 80
+ TF ++E I +P T + + + + GKQ H L+ SGF +
Sbjct: 192 ALDTFGMMQEAN-----IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 81 IFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPE 140
++ L+ LY+KC L SA K FD++ ++ ++SW++LI GYA GE A LF+ + E
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 141 RDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQL 200
NS + + L S I VF + L G Q+
Sbjct: 307 -----LNSQIDSFAL----SSIIGVFADFALLRQ----------------------GKQM 335
Query: 201 HCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKF 260
A+K+ + +++VDMY KC +D++ F M ++ +SW VI G ++
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 261 IEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTD-FEMDVIVGTA 319
+++++F M + + + Y ++L +C+ +K G +L + L+T + V
Sbjct: 396 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 320 TLDMYAKCNNMSDAQKVFNSLP 341
+D+ + + +A+ + +++P
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMP 477
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/640 (31%), Positives = 353/640 (55%), Gaps = 9/640 (1%)
Query: 223 YAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTY 282
+A + ++D++ LF+ M++ + WN +I G +IEA++ + M GV TY
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 283 ASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPN 342
+++S A +S+L+ G ++HA +K F DV V + + +Y K DA+KVF +P
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 343 CGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQV 402
+ S+N++I GY G G +L LF+ + K G + + A AC+ + G ++
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 403 HGLAIKSNLWS-NICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGN 461
H A++S + + ++ V SILDMY K +V A +F+ M +R+ V+WN +I A+NG
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 462 EEETLFYFISMLHAI-MEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGS 520
+ F M ++PD T ++L A A+ G IH ++ G ++ + +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 521 ALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKP 580
ALIDMY +CG ++ A+ I R E++V+SWN+II+ + ++ A + F + + P
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 581 DDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQSDVYISSTLVDMYSKCGNVQDSRIMF 640
D T A++L ++ G ++HA I+K S+ I ++LV MY+ CG+++D+R F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 641 EKSPKRDFVTWNAMICGYAHHGLGEEALKVFENMELENVKPNHATFISVLRACAHIGLVE 700
+D V+WN++I YA HG G ++ +F M V PN +TF S+L AC+ G+V+
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 701 KGLHYFNVMLSDYSLHPQLEHYSCMVDILGRSGQLNKALKLIQEMPFEADDVIWRTLLSI 760
+G YF M +Y + P +EHY CM+D++GR+G + A + ++EMPF IW +LL+
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609
Query: 761 CKIHGNVEVAEEAASSLLQLDPQDSSTYILLSNIYADAGMWDKLSYTRRLMRQNKVRKEP 820
+ H ++ +AE AA + +++ ++ Y+LL N+YA+AG W+ ++ + LM + +
Sbjct: 610 SRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTS 669
Query: 821 GCSWIGVNDKVHTFLVRDKDHPKCEEIYEKLGL---LIGE 857
S + K H F D+ H +IYE L + ++GE
Sbjct: 670 SRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGE 709
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 279/528 (52%), Gaps = 9/528 (1%)
Query: 121 GYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRS 180
G+A M A LF+ M + D WN ++ G+ G + +A+ + M D +
Sbjct: 73 GFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFT 132
Query: 181 FAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMS 240
+ +K+ + + + G ++H +K+GF DV ++L+ +Y K D+ +F M
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 241 ERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQ 300
ER+ VSWN++I+G + +L LFK M K G + + S L +C+ + + K+G +
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 301 LHAHALKTDFEM-DVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNG 359
+H HA+++ E DV+V T+ LDMY+K +S A+++FN + + ++N +I YA+NG
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 360 QGVEALQLF-RLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVA 418
+ +A F ++ +++GL + IT A A+ LEG +HG A++ ++ +
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI----LEGRTIHGYAMRRGFLPHMVLE 368
Query: 419 NSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIME 478
+++DMYG+C + A +FD M ++ +SWN+IIA QNG L F + + +
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 479 PDEFTYGSVLKACAGQQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKI 538
PD T S+L A A +L+ G +IH+ I+KS SN + ++L+ MY CG +E+A+K
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 539 LKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATV 598
+DVVSWN+II ++ + FS M+ V P+ T+A+LL C V
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 599 GLGMQLHAQIIKQEMQSDVYIS--STLVDMYSKCGNVQDSRIMFEKSP 644
G + + + +K+E D I ++D+ + GN ++ E+ P
Sbjct: 549 DEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 285/597 (47%), Gaps = 75/597 (12%)
Query: 43 KPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALK 102
K T T+ + + + + GK+ HA +I GF ++V N LI LY+K
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG------- 179
Query: 103 VFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKA 162
+W+A +FE MPERD++SWNS++SGYL +GD +
Sbjct: 180 ----------CAWDA--------------EKVFEEMPERDIVSWNSMISGYLALGDGFSS 215
Query: 163 IDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDK-DVVTGSALVD 221
+ +F EM + D S AL ACS + G ++HC A++ + DV+ ++++D
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 275
Query: 222 MYAKCKKLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLF-KIMQKIGVGISQS 280
MY+K ++ + +FN M +RN V+WN +I +N + +A F K+ ++ G+
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 281 TYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSL 340
T ++L + A L G +H +A++ F +++ TA +DMY +C + A+ +F+ +
Sbjct: 336 TSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 341 PNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGL 400
+ S+N+II Y QNG+ AL+LF+ L S L + T++ A A EG
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 401 QVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHVFDEMERRDAVSWNAIIAVQAQNG 460
++H +KS WSN + NS++ MY C D+ +A F+ + +D VSWN+II A +G
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 461 NEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS-GMGSNLFVG 519
+++ F M+ + + P++ T+ S+L AC+ ++ G + + + G+ +
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 520 SALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISGFSGAKRSEDAHKFFSYMLKMGVK 579
++D+ + G FS AKR ++ +M
Sbjct: 572 GCMLDLIGRTG-------------------------NFSAAKR---------FLEEMPFV 597
Query: 580 PDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEM-QSDVYISSTLVDMYSKCGNVQD 635
P + +LL+ N + + QI K E + Y+ L++MY++ G +D
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV--LLLNMYAEAGRWED 652
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 240/481 (49%), Gaps = 14/481 (2%)
Query: 318 TATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKSGLG 377
T L +A M DA ++F+ + +N +I G+ G +EA+Q + + +G+
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 378 FNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEACHV 437
+ T + A I+ EG ++H + IK S++ V NS++ +Y K +A V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 438 FDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAGQQAL 497
F+EM RD VSWN++I+ G+ +L F ML +PD F+ S L AC+ +
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 498 NYGMQIHSRIIKSGMGS-NLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAIISG 556
G +IH ++S + + ++ V ++++DMY K G V A++I +R++V+WN +I
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 557 FSGAKRSEDAHKFFSYMLKM-GVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEMQS 615
++ R DA F M + G++PD T LL L G +H +++
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLP 363
Query: 616 DVYISSTLVDMYSKCGNVQDSRIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFENME 675
+ + + L+DMY +CG ++ + ++F++ +++ ++WN++I Y +G AL++F+ +
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 676 LENVKPNHATFISVLRACAHIGLVEKG--LHYFNVMLSDYSLHPQLEHYSCMVDILGRSG 733
++ P+ T S+L A A + +G +H + V +S L + +V + G
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL---NSLVHMYAMCG 480
Query: 734 QLNKALKLIQEMPFEADDVIWRTLLSICKIHGNVEVAEEAASSLL--QLDPQDSSTYILL 791
L A K + + D V W +++ +HG ++ S ++ +++P S+ LL
Sbjct: 481 DLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLL 539
Query: 792 S 792
+
Sbjct: 540 A 540
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 46/322 (14%)
Query: 23 SFSTFTTLKEGKTTAPAITTKPKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIF 82
+F F + E P + T + S I + G+ H + GF P +
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAILE----------GRTIHGYAMRRGFLPHMV 366
Query: 83 VSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERD 142
+ LI +Y +C LKSA +FD+M +++V+SWN++I Y G+ A LF+ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL---- 422
Query: 143 VISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHC 202
W+S L + D+ + A L A + G ++H
Sbjct: 423 ---WDSSL------------------------VPDSTTIASILPAYAESLSLSEGREIHA 455
Query: 203 FAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRMSERNWVSWNTVI-AGCVQNYKFI 261
+ +K + + + ++LV MYA C L+D+ FN + ++ VSWN++I A V + I
Sbjct: 456 YIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRI 515
Query: 262 EALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLHAHALKTDFEMDVIVG--TA 319
++ LF M V ++ST+AS+L +C+ + G + + ++K ++ +D +
Sbjct: 516 -SVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGC 573
Query: 320 TLDMYAKCNNMSDAQKVFNSLP 341
LD+ + N S A++ +P
Sbjct: 574 MLDLIGRTGNFSAAKRFLEEMP 595
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 320/557 (57%), Gaps = 4/557 (0%)
Query: 315 IVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQSYNAIIVGYAQNGQGVEALQLFRLLQKS 374
I+ T + Y + + +A+ +F+ +P+ + ++ A+I GYA + A + F + K
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 375 GLGFNEITLSGAFSACAVIAGYLEGLQVHGLAIKSNLWSNICVANSILDMYGKCQDVIEA 434
G NE TLS +C + G VHG+ +K + ++ V N++++MY C +EA
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 435 -CHVFDEMERRDAVSWNAIIAVQAQNGNEEETLFYFISMLHAIMEPDEFTYGSVLKACAG 493
C +F +++ ++ V+W +I G+ L + ML E + ++A A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 494 QQALNYGMQIHSRIIKSGMGSNLFVGSALIDMYCKCGMVEEAKKILKRTEERDVVSWNAI 553
++ G QIH+ +IK G SNL V ++++D+YC+CG + EAK E++D+++WN +
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 554 ISGFSGAKRSEDAHKFFSYMLKMGVKPDDFTYATLLDTCGNLATVGLGMQLHAQIIKQEM 613
IS + SE A F G P+ +T+ +L+ C N+A + G QLH +I ++
Sbjct: 286 ISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 614 QSDVYISSTLVDMYSKCGNVQDS-RIMFEKSPKRDFVTWNAMICGYAHHGLGEEALKVFE 672
+V +++ L+DMY+KCGN+ DS R+ E +R+ V+W +M+ GY HG G EA+++F+
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 673 NMELENVKPNHATFISVLRACAHIGLVEKGLHYFNVMLSDYSLHPQLEHYSCMVDILGRS 732
M ++P+ F++VL AC H GLVEKGL YFNVM S+Y ++P + Y+C+VD+LGR+
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 733 GQLNKALKLIQEMPFEADDVIWRTLLSICKIHG-NVEVAEEAASSLLQLDPQDSSTYILL 791
G++ +A +L++ MPF+ D+ W +L CK H N ++ AA +++L P+ TY++L
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 792 SNIYADAGMWDKLSYTRRLMRQNKVRKEPGCSWIGVNDKVHTFLVRDKDHPKCEEIYEKL 851
S IYA G W + R++MR +KE G SWI V ++V +F V DK P +Y L
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Query: 852 GLLIGEMKWRGCASDVN 868
GLLI E + G +++
Sbjct: 585 GLLIEETREAGYVPELD 601
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 240/452 (53%), Gaps = 7/452 (1%)
Query: 108 PQRDVVSWNALIFGYAVRGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFV 167
P++ + LI Y +G + AR+LF+ MP+RDV++W ++++GY ++A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 168 EMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCK 227
EM + + + + LK+C ++ +G +H +K+G + + +A+++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 228 -KLDDSVSLFNRMSERNWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASIL 286
++ + +F + +N V+W T+I G I LK++K M ++ +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 287 RSCAALSNLKLGTQLHAHALKTDFEMDVIVGTATLDMYAKCNNMSDAQKVFNSLPNCGLQ 346
R+ A++ ++ G Q+HA +K F+ ++ V + LD+Y +C +S+A+ F+ + + L
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 347 SYNAIIVGYAQNGQGVEALQLFRLLQKSGLGFNEITLSGAFSACAVIAGYLEGLQVHGLA 406
++N +I + EAL +F+ + G N T + +ACA IA G Q+HG
Sbjct: 281 TWNTLI-SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 407 IKSNLWSNICVANSILDMYGKCQDVIEACHVFDEM-ERRDAVSWNAIIAVQAQNGNEEET 465
+ N+ +AN+++DMY KC ++ ++ VF E+ +RR+ VSW +++ +G E
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 466 LFYFISMLHAIMEPDEFTYGSVLKACAGQQALNYGMQIHSRIIKS--GMGSNLFVGSALI 523
+ F M+ + + PD + +VL AC + G++ + +++S G+ + + + ++
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVMESEYGINPDRDIYNCVV 458
Query: 524 DMYCKCGMVEEAKKILKRTE-ERDVVSWNAII 554
D+ + G + EA ++++R + D +W AI+
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 65 GKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKVFDKMPQRDVVSWNALIFGYAV 124
GKQ HA +I GF+ + V N ++ LY +C L A F +M +D+++WN LI
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI----- 286
Query: 125 RGEMGIARTLFEAMPERDVISWNSLLSGYLLVGDFSKAIDVFVEMGRLSGMVDN-RSFAV 183
E+ ER D S+A+ +F G V N +F
Sbjct: 287 -SEL-----------ERS---------------DSSEALLMFQRF-ESQGFVPNCYTFTS 318
Query: 184 ALKACSILEDGDFGVQLHCFAMKMGFDKDVVTGSALVDMYAKCKKLDDSVSLFNRM-SER 242
+ AC+ + + G QLH + GF+K+V +AL+DMYAKC + DS +F + R
Sbjct: 319 LVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRR 378
Query: 243 NWVSWNTVIAGCVQNYKFIEALKLFKIMQKIGVGISQSTYASILRSCAALSNLKLGTQLH 302
N VSW +++ G + EA++LF M G+ + + ++L +C ++ G + +
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-Y 437
Query: 303 AHALKTDFEM--DVIVGTATLDMYAKCNNMSDAQKVFNSLP 341
+ +++++ + D + +D+ + + +A ++ +P
Sbjct: 438 FNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 46/238 (19%)
Query: 44 PKTITFSRIFQELTHDQAQNPGKQAHARLIVSGFKPTIFVSNCLIQLYIKCSNLKSALKV 103
P TF+ + + A N G+Q H R+ GF + ++N LI +Y KC N+ + +V
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 104 FDKM-PQRDVVSWNALIFGYAVRGEMGIARTLFEAM------PERDVISWNSLLSGYLLV 156
F ++ +R++VSW +++ GY G A LF+ M P+R I + ++LS
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR--IVFMAVLSA---- 424
Query: 157 GDFSKAIDVFVEMGRLSGMVDNRSFAVALKACSILEDGDFGVQLHCFAMKMGFDKDVVTG 216
R +G+V+ LK +++E ++G+ D+D+
Sbjct: 425 -------------CRHAGLVEK-----GLKYFNVMES-EYGINP---------DRDIY-- 454
Query: 217 SALVDMYAKCKKLDDSVSLFNRMS-ERNWVSWNTVIAGCV--QNYKFIEALKLFKIMQ 271
+ +VD+ + K+ ++ L RM + + +W ++ C ++ I L K+M+
Sbjct: 455 NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVME 512
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 319,821,443
Number of Sequences: 539616
Number of extensions: 13147656
Number of successful extensions: 40471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 27435
Number of HSP's gapped (non-prelim): 3273
length of query: 888
length of database: 191,569,459
effective HSP length: 127
effective length of query: 761
effective length of database: 123,038,227
effective search space: 93632090747
effective search space used: 93632090747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)