BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002721
(888 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 243/482 (50%), Gaps = 54/482 (11%)
Query: 55 GIDCDLNQAFVVKLDLSRLQLRGNITLVSEL---KALKRLDLSNNA--FSGTIPSAFGNL 109
G C A + LDLSR L G +T ++ L LK L++S+N F G + L
Sbjct: 95 GFKC---SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KL 150
Query: 110 SELEFLDLSLNKFGG------VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDF 163
+ LE LDLS N G V+ G LK L IS N + G++ ++ LE
Sbjct: 151 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDV--DVSRCVNLEFL 205
Query: 164 QVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIP 223
VSSN + IPF +G+ + L+ N+L G+ + + +EL+LLN+ SNQ GPIP
Sbjct: 206 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Query: 224 KSIFASGKLEVLVLTQNRLTGDIPE-LVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTY 282
S L+ L L +N+ TG+IP+ L G C +L+ + + N G +P G+ S L
Sbjct: 265 PLPLKS--LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322
Query: 283 FEADNNNLSGEI-----------------VPEFSQ---------CSNLTLLNLASNGFTG 316
+NN SGE+ EFS ++L L+L+SN F+G
Sbjct: 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382
Query: 317 VIPPELGQ--LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMS 374
I P L Q LQEL L N G+IP ++ C L L LS N +GTIP+++ +S
Sbjct: 383 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442
Query: 375 RLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNH 434
+L+ L L N L+GEIP E+ L L + N LTG IP + + NL ++LS N
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW-ISLSNNR 501
Query: 435 LHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVPFQ 494
L G +P +G+L+ L +SNN SG IP+ L SLI ++ + NL G +P+ + F+
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM-FK 560
Query: 495 KS 496
+S
Sbjct: 561 QS 562
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 221/500 (44%), Gaps = 83/500 (16%)
Query: 68 LDLSRLQLRGNIT--LVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV 125
L L+ + G I L L LDLS N F G +P FG+ S LE L LS N F G
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 126 IPRE-LGSLKDLRFFNISNNVLVGEIPDELKSLE-------------------------- 158
+P + L ++ L+ ++S N GE+P+ L +L
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 159 -KLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQ 217
L++ + +N G IP + N + L N L G IP +LGS+S+L L L N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 218 LEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNV 277
LEG IP+ + LE L+L N LTG+IP + +C +L+ I + NN L G IP+ IG +
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513
Query: 278 SGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPEL--------GQLINLQ 329
L + NN+ SG I E C +L L+L +N F G IP + I +
Sbjct: 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGK 573
Query: 330 ELILYENSLFGEIPKSILACKNL-----------------NKLDLSNNRFNGTIPNAICD 372
+ +N + K NL N ++++ + G +
Sbjct: 574 RYVYIKND---GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630
Query: 373 MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSF 432
+ +L + N L G IP EIG+ L L++G N ++GSIP E+G +R L I L+LS
Sbjct: 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI-LDLSS 689
Query: 433 NHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVP 492
N L G +P + L L D+SNN LS GP+P
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLS------------------------GPIPEMGQ 725
Query: 493 FQKSPNSSFFGNKGLCGEPL 512
F+ P + F N GLCG PL
Sbjct: 726 FETFPPAKFLNNPGLCGYPL 745
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 243/513 (47%), Gaps = 59/513 (11%)
Query: 39 IVPGWGVNGTNFCNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLD----LS 94
++P W N N C + G+ C ++ V +DLS L + VS LS
Sbjct: 29 LLPDWSSN-KNPCTFDGVTCRDDK--VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85
Query: 95 NNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPR--ELGSLKDLRFFNISNNVL--VGEI 150
N+ +G++ S F + L LDLS N G + LGS L+F N+S+N L G++
Sbjct: 86 NSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 144
Query: 151 PDELKSLEKLEDFQVSSNKLNGS-IPFWV--GNLTNLRVFTAYENQLVGEIPDNLGSVSE 207
LK L LE +S+N ++G+ + WV L+ N++ G++ ++
Sbjct: 145 SGGLK-LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVN 201
Query: 208 LELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLV 267
LE L++ SN IP + L+ L ++ N+L+GD + C L + I +N V
Sbjct: 202 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Query: 268 GVIPRAIGNVSGLTYFEADNNNLSGEIVPEF--SQCSNLTLLNLASNGFTGVIPPELGQL 325
G IP + L Y N +GEI P+F C LT L+L+ N F G +PP G
Sbjct: 261 GPIPPLP--LKSLQYLSLAENKFTGEI-PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317
Query: 326 INLQELILYENSLFGEIP-KSILACKNLNKLDLSNNRFNGTIPNAICDMS-RLQYLLLGQ 383
L+ L L N+ GE+P ++L + L LDLS N F+G +P ++ ++S L L L
Sbjct: 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377
Query: 384 NSLKGEI-PHEIGNCMKLLQ-LHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLPP 441
N+ G I P+ N LQ L++ +N TG IPP + + L ++L+LSFN+L G++P
Sbjct: 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL-VSLHLSFNYLSGTIPS 436
Query: 442 ELGKLDKLVSFD------------------------VSNNQLSGTIPSALKGMLSLIEVN 477
LG L KL + N L+G IPS L +L ++
Sbjct: 437 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 496
Query: 478 FSNNLLTGPVPSFV------PFQKSPNSSFFGN 504
SNN LTG +P ++ K N+SF GN
Sbjct: 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 166/367 (45%), Gaps = 42/367 (11%)
Query: 62 QAFVVKLDLSRLQLRGNI--TLVSELK-ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLS 118
A ++ LDLS G I L K L+ L L NN F+G IP N SEL L LS
Sbjct: 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 119 LNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLE----DF----------- 163
N G IP LGSL LR + N+L GEIP EL ++ LE DF
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 164 ---------QVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLH 214
+S+N+L G IP W+G L NL + N G IP LG L L+L+
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546
Query: 215 SNQLEGPIPKSIFA-SGKLEVLVLTQNRLT-----GDIPELVGHCKSLSNIRIGNNDLVG 268
+N G IP ++F SGK+ + R G E G L I + L
Sbjct: 547 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 606
Query: 269 VIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINL 328
+ R N++ Y G P F ++ L+++ N +G IP E+G + L
Sbjct: 607 LSTRNPCNITSRVY--------GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 658
Query: 329 QELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKG 388
L L N + G IP + + LN LDLS+N+ +G IP A+ ++ L + L N+L G
Sbjct: 659 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718
Query: 389 EIPHEIG 395
IP E+G
Sbjct: 719 PIP-EMG 724
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 243/482 (50%), Gaps = 54/482 (11%)
Query: 55 GIDCDLNQAFVVKLDLSRLQLRGNITLVSEL---KALKRLDLSNNA--FSGTIPSAFGNL 109
G C A + LDLSR L G +T ++ L LK L++S+N F G + L
Sbjct: 92 GFKC---SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KL 147
Query: 110 SELEFLDLSLNKFGG------VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDF 163
+ LE LDLS N G V+ G LK L IS N + G++ ++ LE
Sbjct: 148 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDV--DVSRCVNLEFL 202
Query: 164 QVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIP 223
VSSN + IPF +G+ + L+ N+L G+ + + +EL+LLN+ SNQ GPIP
Sbjct: 203 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Query: 224 KSIFASGKLEVLVLTQNRLTGDIPE-LVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTY 282
S L+ L L +N+ TG+IP+ L G C +L+ + + N G +P G+ S L
Sbjct: 262 PLPLKS--LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 319
Query: 283 FEADNNNLSGEI-----------------VPEFSQ---------CSNLTLLNLASNGFTG 316
+NN SGE+ EFS ++L L+L+SN F+G
Sbjct: 320 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 379
Query: 317 VIPPELGQ--LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMS 374
I P L Q LQEL L N G+IP ++ C L L LS N +GTIP+++ +S
Sbjct: 380 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 439
Query: 375 RLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNH 434
+L+ L L N L+GEIP E+ L L + N LTG IP + + NL ++LS N
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW-ISLSNNR 498
Query: 435 LHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVPFQ 494
L G +P +G+L+ L +SNN SG IP+ L SLI ++ + NL G +P+ + F+
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM-FK 557
Query: 495 KS 496
+S
Sbjct: 558 QS 559
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 229/523 (43%), Gaps = 84/523 (16%)
Query: 68 LDLSRLQLRGNIT--LVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV 125
L L+ + G I L L LDLS N F G +P FG+ S LE L LS N F G
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 126 IPRE-LGSLKDLRFFNISNNVLVGEIPDELKSLE-------------------------- 158
+P + L ++ L+ ++S N GE+P+ L +L
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 159 -KLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQ 217
L++ + +N G IP + N + L N L G IP +LGS+S+L L L N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 218 LEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNV 277
LEG IP+ + LE L+L N LTG+IP + +C +L+ I + NN L G IP+ IG +
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 510
Query: 278 SGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPEL--------GQLINLQ 329
L + NN+ SG I E C +L L+L +N F G IP + I +
Sbjct: 511 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGK 570
Query: 330 ELILYENSLFGEIPKSILACKNL-----------------NKLDLSNNRFNGTIPNAICD 372
+ +N + K NL N ++++ + G +
Sbjct: 571 RYVYIKND---GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 627
Query: 373 MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSF 432
+ +L + N L G IP EIG+ L L++G N ++GSIP E+G +R L I L+LS
Sbjct: 628 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI-LDLSS 686
Query: 433 NHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVP 492
N L G +P + L L D+SNN LS GP+P
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLS------------------------GPIPEMGQ 722
Query: 493 FQKSPNSSFFGNKGLCGEPLSFSCGNANGPDSKNYRHRVSYRI 535
F+ P + F N GLCG PL C +N +++ R+
Sbjct: 723 FETFPPAKFLNNPGLCGYPLP-RCDPSNADGYAHHQRSHGRRL 764
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 243/513 (47%), Gaps = 59/513 (11%)
Query: 39 IVPGWGVNGTNFCNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLD----LS 94
++P W N N C + G+ C ++ V +DLS L + VS LS
Sbjct: 26 LLPDWSSN-KNPCTFDGVTCRDDK--VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 82
Query: 95 NNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPR--ELGSLKDLRFFNISNNVL--VGEI 150
N+ +G++ S F + L LDLS N G + LGS L+F N+S+N L G++
Sbjct: 83 NSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 141
Query: 151 PDELKSLEKLEDFQVSSNKLNGS-IPFWV--GNLTNLRVFTAYENQLVGEIPDNLGSVSE 207
LK L LE +S+N ++G+ + WV L+ N++ G++ ++
Sbjct: 142 SGGLK-LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVN 198
Query: 208 LELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLV 267
LE L++ SN IP + L+ L ++ N+L+GD + C L + I +N V
Sbjct: 199 LEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 257
Query: 268 GVIPRAIGNVSGLTYFEADNNNLSGEIVPEF--SQCSNLTLLNLASNGFTGVIPPELGQL 325
G IP + L Y N +GEI P+F C LT L+L+ N F G +PP G
Sbjct: 258 GPIPPLP--LKSLQYLSLAENKFTGEI-PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 314
Query: 326 INLQELILYENSLFGEIP-KSILACKNLNKLDLSNNRFNGTIPNAICDMS-RLQYLLLGQ 383
L+ L L N+ GE+P ++L + L LDLS N F+G +P ++ ++S L L L
Sbjct: 315 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 374
Query: 384 NSLKGEI-PHEIGNCMKLLQ-LHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLPP 441
N+ G I P+ N LQ L++ +N TG IPP + + L ++L+LSFN+L G++P
Sbjct: 375 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL-VSLHLSFNYLSGTIPS 433
Query: 442 ELGKLDKLVSFD------------------------VSNNQLSGTIPSALKGMLSLIEVN 477
LG L KL + N L+G IPS L +L ++
Sbjct: 434 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 493
Query: 478 FSNNLLTGPVPSFV------PFQKSPNSSFFGN 504
SNN LTG +P ++ K N+SF GN
Sbjct: 494 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 166/367 (45%), Gaps = 42/367 (11%)
Query: 62 QAFVVKLDLSRLQLRGNI--TLVSELK-ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLS 118
A ++ LDLS G I L K L+ L L NN F+G IP N SEL L LS
Sbjct: 364 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 119 LNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLE----DF----------- 163
N G IP LGSL LR + N+L GEIP EL ++ LE DF
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 164 ---------QVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLH 214
+S+N+L G IP W+G L NL + N G IP LG L L+L+
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 543
Query: 215 SNQLEGPIPKSIFA-SGKLEVLVLTQNRLT-----GDIPELVGHCKSLSNIRIGNNDLVG 268
+N G IP ++F SGK+ + R G E G L I + L
Sbjct: 544 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 603
Query: 269 VIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINL 328
+ R N++ Y G P F ++ L+++ N +G IP E+G + L
Sbjct: 604 LSTRNPCNITSRVY--------GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 655
Query: 329 QELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKG 388
L L N + G IP + + LN LDLS+N+ +G IP A+ ++ L + L N+L G
Sbjct: 656 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 715
Query: 389 EIPHEIG 395
IP E+G
Sbjct: 716 PIP-EMG 721
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 176/323 (54%), Gaps = 31/323 (9%)
Query: 574 DSGASSQPSIIAGNVLVENLRQAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMPSGLILS 633
D A P + G + +LR+ V + N++ G F VYK + G +++
Sbjct: 3 DVPAEEDPEVHLGQLKRFSLREL----QVASDNFXNKNILGRGGFGKVYKGRLADGXLVA 58
Query: 634 VKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQ 693
VKRLK +RT + + E+E +S H NL+R GF + LL++ Y+ NG++A
Sbjct: 59 VKRLKE-ERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116
Query: 694 LLHESTKQPDYRP--DWPTRLSIAIGVAEGLAFLH-HV--AIIHLDISSGNVLLDADFKP 748
L E +P+ +P DWP R IA+G A GLA+LH H IIH D+ + N+LLD +F+
Sbjct: 117 CLRE---RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173
Query: 749 LLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT-- 806
++G+ ++KL+D K AV G G+I PEY T + + +V+ YGV+LLE++T
Sbjct: 174 VVGDFGLAKLMD-YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
Query: 807 -----TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTAL-KV 860
RL ++D V L+ WV G + + E ++D L ++ E + L +V
Sbjct: 233 RAFDLARLANDDD----VMLLDWVKGL-LKEKKLEALVDVDLQG---NYKDEEVEQLIQV 284
Query: 861 ALLCTDSTPAKRPKMKKVVEMLQ 883
ALLCT S+P +RPKM +VV ML+
Sbjct: 285 ALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 31/323 (9%)
Query: 574 DSGASSQPSIIAGNVLVENLRQAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMPSGLILS 633
D A P + G + +LR+ V + N++ G F VYK + G +++
Sbjct: 11 DVPAEEDPEVHLGQLKRFSLREL----QVASDNFSNKNILGRGGFGKVYKGRLADGTLVA 66
Query: 634 VKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQ 693
VKRLK + + + E+E +S H NL+R GF + LL++ Y+ NG++A
Sbjct: 67 VKRLK--EERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
Query: 694 LLHESTKQPDYRP--DWPTRLSIAIGVAEGLAFLH-HV--AIIHLDISSGNVLLDADFKP 748
L E +P+ +P DWP R IA+G A GLA+LH H IIH D+ + N+LLD +F+
Sbjct: 125 CLRE---RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 749 LLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT-- 806
++G+ ++KL+D K AV G+ G+I PEY T + + +V+ YGV+LLE++T
Sbjct: 182 VVGDFGLAKLMD-YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 807 -----TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTAL-KV 860
RL ++D V L+ WV G + + E ++D L ++ E + L +V
Sbjct: 241 RAFDLARLANDDD----VMLLDWVKGL-LKEKKLEALVDVDLQG---NYKDEEVEQLIQV 292
Query: 861 ALLCTDSTPAKRPKMKKVVEMLQ 883
ALLCT S+P +RPKM +VV ML+
Sbjct: 293 ALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 134/276 (48%), Gaps = 14/276 (5%)
Query: 612 MIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEK--LSKLCHDNLVRP 669
+I G F VYK V+ G +++KR RT Q E E LS H +LV
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKR-----RTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
IGF + +L++ Y+ NG L + L+ S P W RL I IG A GL +LH A
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVT 789
IIH D+ S N+LLD +F P + + ISK T V G+ GYI PEY ++T
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 790 APGNVYSYGVVLLEILTTRLPVEEDF-GEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+VYS+GVVL E+L R + + E V+L +W + G+ EQI+D L+
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL-EQIVDPNLAD--- 275
Query: 849 GWRKEMLTAL-KVALLCTDSTPAKRPKMKKVVEMLQ 883
R E L A+ C + RP M V+ L+
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 134/276 (48%), Gaps = 14/276 (5%)
Query: 612 MIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEK--LSKLCHDNLVRP 669
+I G F VYK V+ G +++KR RT Q E E LS H +LV
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKR-----RTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
IGF + +L++ Y+ NG L + L+ S P W RL I IG A GL +LH A
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVT 789
IIH D+ S N+LLD +F P + + ISK T V G+ GYI PEY ++T
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 790 APGNVYSYGVVLLEILTTRLPVEEDF-GEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+VYS+GVVL E+L R + + E V+L +W + G+ EQI+D L+
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL-EQIVDPNLAD--- 275
Query: 849 GWRKEMLTAL-KVALLCTDSTPAKRPKMKKVVEMLQ 883
R E L A+ C + RP M V+ L+
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 9/271 (3%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSM-DRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F VYK + + ++VK+L +M D T + + +E++ ++K H+NLV +GF
Sbjct: 42 GGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS 100
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
D L++ Y+PNG+L L P W R IA G A G+ FLH IH D
Sbjct: 101 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPL--SWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
I S N+LLD F + + +++ + T S + G+ Y+ PE A ++T ++
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDI 217
Query: 795 YSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM 854
YS+GVVLLEI+T LP ++ E L+ +T E +D +++ + M
Sbjct: 218 YSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM 276
Query: 855 LTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
+ VA C KRP +KKV ++LQE+
Sbjct: 277 YS---VASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 9/271 (3%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSM-DRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F VYK + + ++VK+L +M D T + + +E++ ++K H+NLV +GF
Sbjct: 42 GGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS 100
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
D L++ Y+PNG+L L P W R IA G A G+ FLH IH D
Sbjct: 101 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPL--SWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
I S N+LLD F + + +++ + T + G+ Y+ PE A ++T ++
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDI 217
Query: 795 YSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM 854
YS+GVVLLEI+T LP ++ E L+ +T E +D +++ + M
Sbjct: 218 YSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM 276
Query: 855 LTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
+ VA C KRP +KKV ++LQE+
Sbjct: 277 YS---VASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 134/271 (49%), Gaps = 9/271 (3%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSM-DRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F VYK + + ++VK+L +M D T + + +E++ ++K H+NLV +GF
Sbjct: 36 GGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS 94
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
D L++ Y+PNG+L L P W R IA G A G+ FLH IH D
Sbjct: 95 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPL--SWHMRCKIAQGAANGINFLHENHHIHRD 152
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
I S N+LLD F + + +++ + + G+ Y+ PE A ++T ++
Sbjct: 153 IKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDI 211
Query: 795 YSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM 854
YS+GVVLLEI+T LP ++ E L+ +T E +D +++ + M
Sbjct: 212 YSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM 270
Query: 855 LTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
+ VA C KRP +KKV ++LQE+
Sbjct: 271 YS---VASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 9/270 (3%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSM-DRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F VYK + + ++VK+L +M D T + + +E++ +K H+NLV +GF
Sbjct: 33 GGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSS 91
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
D L++ Y PNG+L L P W R IA G A G+ FLH IH D
Sbjct: 92 DGDDLCLVYVYXPNGSLLDRLSCLDGTPPL--SWHXRCKIAQGAANGINFLHENHHIHRD 149
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
I S N+LLD F + + +++ + S + G+ Y PE A ++T ++
Sbjct: 150 IKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDI 208
Query: 795 YSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM 854
YS+GVVLLEI+T LP ++ E L+ +T E +D + + +
Sbjct: 209 YSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDAD---STSV 264
Query: 855 LTALKVALLCTDSTPAKRPKMKKVVEMLQE 884
VA C KRP +KKV ++LQE
Sbjct: 265 EAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 151/342 (44%), Gaps = 62/342 (18%)
Query: 27 DEPTLLAINKELIVP----GWGVNGTNFCN--WKGIDCDLN-QAFVVK-LDLSRLQLRGN 78
D+ LL I K+L P W + T+ CN W G+ CD + Q + V LDLS L L
Sbjct: 7 DKQALLQIKKDLGNPTTLSSW-LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 79 ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLS-LNKFGGVIPRELGSLKDLR 137
IPS+ NL L FL + +N G IP + L L
Sbjct: 66 YP---------------------IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLH 104
Query: 138 FFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGE 197
+ I++ + G IPD L ++ L S N L+G++P + +L NL T N++ G
Sbjct: 105 YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA 164
Query: 198 IPDNLGSVSEL-ELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSL 256
IPD+ GS S+L + + N+L G IP + FA+ L + L++N L GD L G K+
Sbjct: 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLNLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 257 SNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTG 316
I + N L F+ LS NL L+L +N G
Sbjct: 224 QKIHLAKNSLA---------------FDLGKVGLS----------KNLNGLDLRNNRIYG 258
Query: 317 VIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLS 358
+P L QL L L + N+L GEIP+ NL + D+S
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQG----GNLQRFDVS 296
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 18/265 (6%)
Query: 260 RIGNNDLVGV-------IPRAIGNVSGLTY-FEADNNNLSGEIVPEFSQCSNLTLLNLAS 311
R+ N DL G+ IP ++ N+ L + + NNL G I P ++ + L L +
Sbjct: 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH 110
Query: 312 NGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAIC 371
+G IP L Q+ L L N+L G +P SI + NL + NR +G IP++
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
Query: 372 DMSRL-QYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNL 430
S+L + + +N L G+IP N + L + + N L G G +N Q ++L
Sbjct: 171 SFSKLFTSMTISRNRLTGKIPPTFAN-LNLAFVDLSRNMLEGDASVLFGSDKNTQ-KIHL 228
Query: 431 SFNHLHGSLPPELGKL---DKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
+ N SL +LGK+ L D+ NN++ GT+P L + L +N S N L G +
Sbjct: 229 AKN----SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 488 PSFVPFQKSPNSSFFGNKGLCGEPL 512
P Q+ S++ NK LCG PL
Sbjct: 285 PQGGNLQRFDVSAYANNKCLCGSPL 309
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 67 KLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVI 126
K+ L++ L ++ V K L LDL NN GT+P L L L++S N G I
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 127 PRELGSLKDLRFFNISNN 144
P+ G+L+ +NN
Sbjct: 285 PQG-GNLQRFDVSAYANN 301
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 20/206 (9%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQ--NKMIRELEKLSKLCHDNLVRPI 670
I G+F TV++A G ++VK L D H + N+ +RE+ + +L H N+V +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQD---FHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G V ++ YL G+L +LLH+S +Q D R RLS+A VA+G+ +LH+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER----RRLSMAYDVAKGMNYLHNR 156
Query: 729 --AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA--VAGSFGYIPPEYAY 784
I+H D+ S N+L+D + + + +S+L K + + + AG+ ++ PE
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLP 810
+VYS+GV+L E+ T + P
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQ--NKMIRELEKLSKLCHDNLVRPI 670
I G+F TV++A G ++VK L D H + N+ +RE+ + +L H N+V +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQD---FHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G V ++ YL G+L +LLH+S +Q D R RLS+A VA+G+ +LH+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER----RRLSMAYDVAKGMNYLHNR 156
Query: 729 --AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM 786
I+H ++ S N+L+D + + + +S+L + S + AG+ ++ PE
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 787 QVTAPGNVYSYGVVLLEILTTRLP 810
+VYS+GV+L E+ T + P
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP 238
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 610 SNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
S I G+F TVYK + +VK LK +D T Q E+ L K H N++
Sbjct: 41 STRIGSGSFGTVYKGKWHGDV--AVKILKVVDPTPEQFQ-AFRNEVAVLRKTRHVNILLF 97
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLH-ESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
+G++ +++A++ + +L + LH + TK ++ + IA A+G+ +LH
Sbjct: 98 MGYMTKDNLAIVTQ-WCEGSSLYKHLHVQETKFQMFQ-----LIDIARQTAQGMDYLHAK 151
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
IIH D+ S N+ L +G+ ++ + G+ + GS ++ PE MQ
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE-VIRMQD 210
Query: 789 TAP----GNVYSYGVVLLEILTTRLP 810
P +VYSYG+VL E++T LP
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 50/293 (17%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F K +G ++ +K L D Q ++E++ + L H N+++ IG V+
Sbjct: 21 GCFGQAIKVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKFIG-VL 76
Query: 675 YEDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHL 733
Y+D L + Y+ GTL ++ K D + W R+S A +A G+A+LH + IIH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII----KSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 734 DISSGNVLLDADFKPLLGEIEISKLLDPSK----GTASIS--------AVAGSFGYIPPE 781
D++S N L+ + ++ + +++L+ K G S+ V G+ ++ PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 782 YAYTMQVTAPGNVYSYGVVLLEIL------TTRLPVEEDFGEGVDLVKWVHGAPARGETP 835
+V+S+G+VL EI+ LP DFG V G R P
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN------VRGFLDRYCPP 246
Query: 836 EQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
SF + + C D P KRP K+ L+ ++ +
Sbjct: 247 N-------CPPSF---------FPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V KA + + ++K+++S + I EL +LS++ H N+V+ G +
Sbjct: 19 GAFGVVCKAKWRAKDV-AIKQIESESE-----RKAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV---AIIH 732
+ L+ Y G+L +LH + P Y +S + ++G+A+LH + A+IH
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAA--HAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS-----ISAVAGSFGYIPPEYAYTMQ 787
D+ N+LL A L K+ D GTA ++ GS ++ PE
Sbjct: 129 RDLKPPNLLLVAGGTVL-------KICD--FGTACDIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 788 VTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVS 847
+ +V+S+G++L E++T R P +E G ++ VH G P I + S
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKPIES 235
Query: 848 FGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
R C P++RP M+++V+++ +
Sbjct: 236 LMTR------------CWSKDPSQRPSMEEIVKIMTHL 261
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V KA + + ++K+++S + I EL +LS++ H N+V+ G +
Sbjct: 20 GAFGVVCKAKWRAKDV-AIKQIESESE-----RKAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV---AIIH 732
+ L+ Y G+L +LH + P Y +S + ++G+A+LH + A+IH
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAA--HAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS-----ISAVAGSFGYIPPEYAYTMQ 787
D+ N+LL A L K+ D GTA ++ GS ++ PE
Sbjct: 130 RDLKPPNLLLVAGGTVL-------KICD--FGTACDIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 788 VTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVS 847
+ +V+S+G++L E++T R P +E G ++ VH G P I + S
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKPIES 236
Query: 848 FGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
R C P++RP M+++V+++ +
Sbjct: 237 LMTR------------CWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
I G+F TVYK + +VK L T Q E+ L K H N++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
+A++ + +L LH S + + + + IA A G+ +LH +IIH
Sbjct: 77 STKPQLAIVT-QWCEGSSLYHHLHASETKFEMK----KLIDIARQTARGMDYLHAKSIIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP- 791
D+ S N+ L D +G+ ++ + G+ ++GS ++ PE MQ + P
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDSNPY 190
Query: 792 ---GNVYSYGVVLLEILTTRLP 810
+VY++G+VL E++T +LP
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 43 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 97
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 98 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 153
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 154 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 212
Query: 802 LEILT 806
E+ T
Sbjct: 213 YELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 45 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 99
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 100 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 155
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 156 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 214
Query: 802 LEILT 806
E+ T
Sbjct: 215 YELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 69 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 123
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 124 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 179
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 180 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 238
Query: 802 LEILT 806
E+ T
Sbjct: 239 YELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 38 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 92
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 93 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 207
Query: 802 LEILT 806
E+ T
Sbjct: 208 YELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 41 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 95
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 96 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 210
Query: 802 LEILT 806
E+ T
Sbjct: 211 YELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 56 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 110
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 111 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 166
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 225
Query: 802 LEILT 806
E+ T
Sbjct: 226 YELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 37 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 91
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 92 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 147
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 148 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 206
Query: 802 LEILT 806
E+ T
Sbjct: 207 YELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 36 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 90
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 91 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 146
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 147 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 205
Query: 802 LEILT 806
E+ T
Sbjct: 206 YELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 44 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 98
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 99 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 154
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 155 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 213
Query: 802 LEILT 806
E+ T
Sbjct: 214 YELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 42 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 96
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 97 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 152
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 153 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 211
Query: 802 LEILT 806
E+ T
Sbjct: 212 YELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 38 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 92
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 93 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 207
Query: 802 LEILT 806
E+ T
Sbjct: 208 YELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 56 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 110
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 111 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 166
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 225
Query: 802 LEILT 806
E+ T
Sbjct: 226 YELFT 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 594 RQAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIR 653
R A D + + I G+F TVYK + +VK L T Q
Sbjct: 13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ-AFKN 69
Query: 654 ELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS 713
E+ L K H N++ +G+ +A++ + +L LH S + + + +
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQLAIVT-QWCEGSSLYHHLHASETKFEMK----KLID 124
Query: 714 IAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG 773
IA A G+ +LH +IIH D+ S N+ L D +G+ ++ G+ ++G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 774 SFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
S ++ PE MQ + P +VY++G+VL E++T +LP
Sbjct: 185 SILWMAPE-VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 605 ATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL-SKLCH 663
A + +I G F VY+A G ++VK + I + +R+ KL + L H
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 664 DNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLA 723
N++ G + E L+ + G L ++L PD +W A+ +A G+
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMN 119
Query: 724 FLHH---VAIIHLDISSGNVLL-----DADFKPLLGEIEISKLLDPSKGTASISAVAGSF 775
+LH V IIH D+ S N+L+ + D + +I L T +SA AG++
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAY 178
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
++ PE + +V+SYGV+L E+LT +P
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
I G+F TVYK + +VK L T Q E+ L K H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGY 88
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
+A++ + +L LH S + + + + IA A G+ +LH +IIH
Sbjct: 89 STKPQLAIVT-QWCEGSSLYHHLHASETKFEMK----KLIDIARQTARGMDYLHAKSIIH 143
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP- 791
D+ S N+ L D +G+ ++ G+ ++GS ++ PE MQ + P
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDSNPY 202
Query: 792 ---GNVYSYGVVLLEILTTRLP 810
+VY++G+VL E++T +LP
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 41 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 95
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
+LP G+L + L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 96 EFLPYGSLREYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 210
Query: 802 LEILT 806
E+ T
Sbjct: 211 YELFT 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 598 DLDAVVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEK 657
D + + ++K + G F V+ A ++VK +K ++ + E
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV----EAFLAEANV 236
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH--ESTKQPDYRPDWPTRLSIA 715
+ L HD LV+ + V+ ++ ++ ++ G+L L E +KQP P + +
Sbjct: 237 MKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP-----LPKLIDFS 290
Query: 716 IGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF 775
+AEG+AF+ IH D+ + N+L+ A + + ++++++ ++ TA A
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA-KFPI 349
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
+ PE T +V+S+G++L+EI+T R+P
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 41 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 95
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + R D L + +G+ +L IH D+++ N+L++
Sbjct: 96 EYLPYGSLRDYLQAHAE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 151
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 210
Query: 802 LEILT 806
E+ T
Sbjct: 211 YELFT 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
+ + ++K + G F V+ A ++VK +K ++ + E + L
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV----EAFLAEANVMKTL 67
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH--ESTKQPDYRPDWPTRLSIAIGVA 719
HD LV+ + V+ ++ ++ ++ G+L L E +KQP P + + +A
Sbjct: 68 QHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP-----LPKLIDFSAQIA 121
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP 779
EG+AF+ IH D+ + N+L+ A + + ++++++ ++ TA A +
Sbjct: 122 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA-KFPIKWTA 180
Query: 780 PEYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
PE T +V+S+G++L+EI+T R+P
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 38 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 92
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH D+++ N+L++
Sbjct: 93 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 148
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 207
Query: 802 LEILT 806
E+ T
Sbjct: 208 YELFT 212
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 144/328 (43%), Gaps = 49/328 (14%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 117
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 149
Query: 253 CKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASN 312
SL + +N + + P A N++ L + +N +S + ++ +NL L +N
Sbjct: 150 LTSLQQLSFSSNQVTDLKPLA--NLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNN 205
Query: 313 GFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICD 372
+ + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 206 QISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 373 MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSF 432
+++L L LG N + P + L L + N L P I +++NL L L F
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTLYF 314
Query: 433 NHLHGSLPPELGKLDKLVSFDVSNNQLS 460
N++ P + L KL SNN++S
Sbjct: 315 NNISDISP--VSSLTKLQRLFFSNNKVS 340
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L S+N + P NL+ LE LD+S NK
Sbjct: 130 NLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD 187
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 188 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 219
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P S KL L L N++
Sbjct: 220 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLSGLT--KLTELKLGANQI 273
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
+ +I L G +L+N+ + N L + P I N+ LTY NN+S + S S
Sbjct: 274 S-NISPLAG-LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS-----DISPVS 324
Query: 303 NLTLL 307
+LT L
Sbjct: 325 SLTKL 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 27/254 (10%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 124
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L N + P + L L +LD
Sbjct: 125 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKPLANLTT--LERLD 179
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 180 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 230
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 287 NLELNENQLEDISP 300
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY----EDVALLLH 683
+G +++VK+L+ + H RE+E L L HDN+V+ G V Y ++ L++
Sbjct: 39 TGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKG-VCYSAGRRNLKLIM- 93
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
YLP G+L L + + R D L + +G+ +L IH ++++ N+L++
Sbjct: 94 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVE 149
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
+ + +G+ ++K+L K + S F Y PE + + +V+S+GVVL
Sbjct: 150 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVL 208
Query: 802 LEILT 806
E+ T
Sbjct: 209 YELFT 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ +A+ G+ Y+PPE
Sbjct: 135 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFE 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 19 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 73
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + +A +A G+A++ + +H D+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 189
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRKE
Sbjct: 190 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ + G+ +
Sbjct: 134 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 194 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ + G+ +
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 195 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKKVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ +A+ G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 51/329 (15%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 117
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 149
Query: 253 CKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASN 312
SL + +N + + P A N++ L + +N +S + ++ +NL L +N
Sbjct: 150 LTSLQQLSFSSNQVTDLKPLA--NLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNN 205
Query: 313 GFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICD 372
+ + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 206 QISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 373 MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSF 432
+++L L LG N + P + L L + N L P I +++NL L L F
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTLYF 314
Query: 433 NHLHGSLP-PELGKLDKLVSFDVSNNQLS 460
N++ P L KL +L + NN++S
Sbjct: 315 NNISDISPVSSLTKLQRLFFY---NNKVS 340
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 76/317 (23%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L S+N + P NL+ LE LD+S NK
Sbjct: 130 NLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD 187
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 188 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 219
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P
Sbjct: 220 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP------------------- 256
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
L G K L+ +++G N + + P A ++ LT E + N L E + S
Sbjct: 257 ------LSGLTK-LTELKLGANQISNISPLA--GLTALTNLELNENQL--EDISPISNLK 305
Query: 303 NLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRF 362
NLT L L N + + P + L LQ L Y N + S+ N+N L +N+
Sbjct: 306 NLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 361
Query: 363 NGTIPNAICDMSRLQYL 379
+ P + +++R+ L
Sbjct: 362 SDLTP--LANLTRITQL 376
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 27/254 (10%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 124
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L N + P + L L +LD
Sbjct: 125 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKPLANLTT--LERLD 179
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 180 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 230
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 287 NLELNENQLEDISP 300
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 51/329 (15%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 117
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 149
Query: 253 CKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASN 312
SL + +N + + P A N++ L + +N +S + ++ +NL L +N
Sbjct: 150 LTSLQQLNFSSNQVTDLKPLA--NLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNN 205
Query: 313 GFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICD 372
+ + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 206 QISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 373 MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSF 432
+++L L LG N + P + L L + N L P I +++NL L L F
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTLYF 314
Query: 433 NHLHGSLP-PELGKLDKLVSFDVSNNQLS 460
N++ P L KL +L + NN++S
Sbjct: 315 NNISDISPVSSLTKLQRLFFY---NNKVS 340
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L+ S+N + P NL+ LE LD+S NK
Sbjct: 130 NLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD 187
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 188 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 219
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P
Sbjct: 220 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP------------------- 256
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
L G K L+ +++G N + + P A ++ LT E + N L E + S
Sbjct: 257 ------LSGLTK-LTELKLGANQISNISPLA--GLTALTNLELNENQL--EDISPISNLK 305
Query: 303 NLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRF 362
NLT L L N + + P + L LQ L Y N + S+ N+N L +N+
Sbjct: 306 NLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 361
Query: 363 NGTIPNAICDMSRLQYL 379
+ P + +++R+ L
Sbjct: 362 SDLTP--LANLTRITQL 376
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 27/254 (10%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 124
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L N + P + L L +LD
Sbjct: 125 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKPLANLTT--LERLD 179
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 180 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 230
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 287 NLELNENQLEDISP 300
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 54/330 (16%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 117
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 149
Query: 253 CKSLSNIRIGN--NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLA 310
SL + GN DL + + N++ L + +N +S + ++ +NL L
Sbjct: 150 LTSLQQLNFGNQVTDL-----KPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIAT 202
Query: 311 SNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAI 370
+N + + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 203 NNQISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--L 256
Query: 371 CDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNL 430
+++L L LG N + P + L L + N L P I +++NL L L
Sbjct: 257 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTL 311
Query: 431 SFNHLHGSLPPELGKLDKLVSFDVSNNQLS 460
FN++ P + L KL SNN++S
Sbjct: 312 YFNNISDISP--VSSLTKLQRLFFSNNKVS 339
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 108/245 (44%), Gaps = 52/245 (21%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L+ N T NL+ LE LD+S NK
Sbjct: 130 NLNRLELSSNTISDISALSGLTSLQQLNFGNQV---TDLKPLANLTTLERLDISSNKVSD 186
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 187 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 218
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P S KL L L N++
Sbjct: 219 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLSGLT--KLTELKLGANQI 272
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
+ +I L G +L+N+ + N L + P I N+ LTY NN+S + S S
Sbjct: 273 S-NISPLAG-LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS-----DISPVS 323
Query: 303 NLTLL 307
+LT L
Sbjct: 324 SLTKL 328
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 28/254 (11%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 124
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L + N + P + L L +LD
Sbjct: 125 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLN-FGNQVTDLKPLANLTT--LERLD 178
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 179 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 229
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 230 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 285
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 286 NLELNENQLEDISP 299
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 22 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 76
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + +A +A G+A++ + +H D+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 133
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 192
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRKE
Sbjct: 193 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 248
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
I G+F TVYK + +VK L T Q E+ L K H N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGY 77
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
+A++ + +L LH + + + + IA A+G+ +LH +IIH
Sbjct: 78 STKPQLAIVT-QWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP- 791
D+ S N+ L D +G+ ++ + G+ ++GS ++ PE MQ P
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNPY 191
Query: 792 ---GNVYSYGVVLLEILTTRLP 810
+VY++G+VL E++T +LP
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ + G+ +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 172 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ +A+ G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ + G+ +
Sbjct: 109 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 168
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 169 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 249
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + +A +A G+A++ + +H D+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 365
Query: 796 SYGVVLLEILTT-RLPVEEDFGEGV-DLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P V D V+ + P E PE + D WRKE
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 421
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
I G+F TVYK + +VK L T Q E+ L K H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGY 72
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
+A++ + +L LH + + + + IA A+G+ +LH +IIH
Sbjct: 73 STKPQLAIVT-QWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP- 791
D+ S N+ L D +G+ ++ + G+ ++GS ++ PE MQ P
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNPY 186
Query: 792 ---GNVYSYGVVLLEILTTRLP 810
+VY++G+VL E++T +LP
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 249
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + +A +A G+A++ + +H D+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 365
Query: 796 SYGVVLLEILTT-RLPVEEDFGEGV-DLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P V D V+ + P E PE + D WRKE
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 421
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
I G+F TVYK + +VK L T Q E+ L K H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGY 72
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
+A++ + +L LH + + + + IA A+G+ +LH +IIH
Sbjct: 73 STAPQLAIVT-QWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP- 791
D+ S N+ L D +G+ ++ + G+ ++GS ++ PE MQ P
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNPY 186
Query: 792 ---GNVYSYGVVLLEILTTRLP 810
+VY++G+VL E++T +LP
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 249
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + +A +A G+A++ + +H D+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 365
Query: 796 SYGVVLLEILTT-RLPVEEDFGEGV-DLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P V D V+ + P E PE + D WRKE
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 421
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 36 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 93
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 148
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 149 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFE 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVA---LLLHN 684
+G ++VK LK + +H + +E+E L L H+N+V+ G + ED L+
Sbjct: 49 TGEQVAVKSLKP--ESGGNHIADLKKEIEILRNLYHENIVKYKG-ICTEDGGNGIKLIME 105
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
+LP+G+L + L ++ + + + +L A+ + +G+ +L +H D+++ NVL+++
Sbjct: 106 FLPSGSLKEYLPKNKNKINLK----QQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 161
Query: 745 DFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLL 802
+ + +G+ ++K ++ K ++ S F Y PE + +V+S+GV L
Sbjct: 162 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLH 220
Query: 803 EILT 806
E+LT
Sbjct: 221 ELLT 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 77
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 132
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + ++G+ Y+PPE
Sbjct: 133 RDIKPENLLLGS-----AGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFE 208
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 278 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 332
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + +A +A G+A++ + +H D+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 389
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 448
Query: 796 SYGVVLLEILTT-RLPVEEDFGEGV-DLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P V D V+ + P E PE + D WRKE
Sbjct: 449 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 504
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVA---LLLHN 684
+G ++VK LK + +H + +E+E L L H+N+V+ G + ED L+
Sbjct: 37 TGEQVAVKSLKP--ESGGNHIADLKKEIEILRNLYHENIVKYKG-ICTEDGGNGIKLIME 93
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
+LP+G+L + L ++ + + + +L A+ + +G+ +L +H D+++ NVL+++
Sbjct: 94 FLPSGSLKEYLPKNKNKINLK----QQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 149
Query: 745 DFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLL 802
+ + +G+ ++K ++ K ++ S F Y PE + +V+S+GV L
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLH 208
Query: 803 EILT 806
E+LT
Sbjct: 209 ELLT 212
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 78
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 133
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 134 RDIKPENLLLGS-----AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFE 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 102
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 157
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 158 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFE 233
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 598 DLDAVVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEK 657
D + + ++K + G F V+ A ++VK +K ++ + E
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV----EAFLAEANV 230
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH--ESTKQPDYRPDWPTRLSIA 715
+ L HD LV+ + V+ ++ ++ ++ G+L L E +KQP P + +
Sbjct: 231 MKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP-----LPKLIDFS 284
Query: 716 IGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLD--PSKGTASISAVAG 773
+AEG+AF+ IH D+ + N+L+ A + + ++++ P K TA + G
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFG 344
Query: 774 SFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
SF T +V+S+G++L+EI+T R+P
Sbjct: 345 SF-------------TIKSDVWSFGILLMEIVTYGRIP 369
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ G+ +
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 195 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 81
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 136
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 137 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 135 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFE 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ G+ +
Sbjct: 127 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 187 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + + E + + KL HD LV+ + V+
Sbjct: 20 GQFGEVWMGTWNGNTKVAIKTLKPGTMS----PESFLEEAQIMKKLKHDKLVQ-LYAVVS 74
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + + P+ + +A VA G+A++ + IH D+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPN---LVDMAAQVAAGMAYIERMNYIHRDL 131
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
S N+L+ + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 190
Query: 796 SYGVVLLEILTT-RLP 810
S+G++L E++T R+P
Sbjct: 191 SFGILLTELVTKGRVP 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 81
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P G + + L + +K + R + +A L++ H +IH
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 136
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 137 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFE 212
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 144/330 (43%), Gaps = 54/330 (16%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 121
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 153
Query: 253 CKSLSNIRIGN--NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLA 310
SL + GN DL + + N++ L + +N +S + ++ +NL L
Sbjct: 154 LTSLQQLSFGNQVTDL-----KPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIAT 206
Query: 311 SNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAI 370
+N + + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 207 NNQISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--L 260
Query: 371 CDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNL 430
+++L L LG N + P + L L + N L P I +++NL L L
Sbjct: 261 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTL 315
Query: 431 SFNHLHGSLPPELGKLDKLVSFDVSNNQLS 460
FN++ P + L KL +NN++S
Sbjct: 316 YFNNISDISP--VSSLTKLQRLFFANNKVS 343
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 117/269 (43%), Gaps = 51/269 (18%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L N T NL+ LE LD+S NK
Sbjct: 134 NLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISSNKVSD 190
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 191 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 222
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P S KL L L N++
Sbjct: 223 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLSGLT--KLTELKLGANQI 276
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
+ +I L G +L+N+ + N L + P I N+ LTY NN+S +I P S +
Sbjct: 277 S-NISPLAG-LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS-DISP-VSSLT 330
Query: 303 NLTLLNLASNGFTGVIPPELGQLINLQEL 331
L L A+N + V L L N+ L
Sbjct: 331 KLQRLFFANNKVSDV--SSLANLTNINWL 357
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 28/254 (11%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 75 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 128
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L + N + P + L L +LD
Sbjct: 129 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLS-FGNQVTDLKPLANLTT--LERLD 182
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 183 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 233
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 234 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 289
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 290 NLELNENQLEDISP 303
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 80
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + ++ +A G+A++ + +H D+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 196
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRKE
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 252
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 145/331 (43%), Gaps = 56/331 (16%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 117
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 149
Query: 253 CKSLSNIRIGN--NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLA 310
SL + GN DL + + N++ L + +N +S + ++ +NL L
Sbjct: 150 LTSLQQLNFGNQVTDL-----KPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIAT 202
Query: 311 SNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAI 370
+N + + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 203 NNQISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--L 256
Query: 371 CDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNL 430
+++L L LG N + P + L L + N L P I +++NL L L
Sbjct: 257 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTL 311
Query: 431 SFNHLHGSLP-PELGKLDKLVSFDVSNNQLS 460
FN++ P L KL +L + NN++S
Sbjct: 312 YFNNISDISPVSSLTKLQRLFFY---NNKVS 339
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 77/317 (24%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L+ N T NL+ LE LD+S NK
Sbjct: 130 NLNRLELSSNTISDISALSGLTSLQQLNFGNQV---TDLKPLANLTTLERLDISSNKVSD 186
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 187 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 218
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P
Sbjct: 219 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP------------------- 255
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
L G K L+ +++G N + + P A ++ LT E + N L E + S
Sbjct: 256 ------LSGLTK-LTELKLGANQISNISPLA--GLTALTNLELNENQL--EDISPISNLK 304
Query: 303 NLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRF 362
NLT L L N + + P + L LQ L Y N + S+ N+N L +N+
Sbjct: 305 NLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 360
Query: 363 NGTIPNAICDMSRLQYL 379
+ P + +++R+ L
Sbjct: 361 SDLTP--LANLTRITQL 375
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 28/254 (11%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 124
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L + N + P + L L +LD
Sbjct: 125 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLN-FGNQVTDLKPLANLTT--LERLD 178
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 179 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 229
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 230 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 285
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 286 NLELNENQLEDISP 299
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 77
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 132
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 133 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 77
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 132
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 133 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFE 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 135 RDIKPENLLLGS-----AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFE 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 41/272 (15%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 81
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 136
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 137 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 792 GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSF--- 848
+++S GV+ E L + P E A ET ++I + F
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFE---------------ANTYQETYKRISRVEFTFPDFVTE 236
Query: 849 GWRKEMLTALKVALLCTDSTPAKRPKMKKVVE 880
G R + LK P++RP +++V+E
Sbjct: 237 GARDLISRLLK-------HNPSQRPXLREVLE 261
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 80
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L T + P + ++ +A G+A++ + +H D+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 196
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRKE
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKE 252
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 80
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 135
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 136 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFE 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 81
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 136
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 137 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFE 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ IA A+G+ +LH +IIH D+ S N+ L D +G+ ++ G+ +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 166
Query: 772 AGSFGYIPPEYAYTMQVTAP----GNVYSYGVVLLEILTTRLP 810
+GS ++ PE MQ P +VY++G+VL E++T +LP
Sbjct: 167 SGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 145/331 (43%), Gaps = 56/331 (16%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L N SNN L P LK+L KL D +++N++ P NLTNL T + N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL--ANLTNLTGLTLFNN 122
Query: 193 QLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGH 252
Q+ P L +++ L L L SN + DI L G
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTI-------------------------SDISALSG- 154
Query: 253 CKSLSNIRIGN--NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLA 310
SL + GN DL + + N++ L + +N +S + ++ +NL L
Sbjct: 155 LTSLQQLSFGNQVTDL-----KPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIAT 207
Query: 311 SNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAI 370
+N + + P LG L NL EL L N L + ++ + NL LDL+NN+ + P +
Sbjct: 208 NNQISDITP--LGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--L 261
Query: 371 CDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNL 430
+++L L LG N + P + L L + N L P I +++NL L L
Sbjct: 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY-LTL 316
Query: 431 SFNHLHGSLP-PELGKLDKLVSFDVSNNQLS 460
FN++ P L KL +L + NN++S
Sbjct: 317 YFNNISDISPVSSLTKLQRLFFY---NNKVS 344
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 127/317 (40%), Gaps = 77/317 (24%)
Query: 69 DLSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGG 124
+L+RL+L N I+ +S L +L++L N T NL+ LE LD+S NK
Sbjct: 135 NLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISSNKVSD 191
Query: 125 VIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNL 184
+ L L LE ++N+++ P G LTNL
Sbjct: 192 I--------------------------SVLAKLTNLESLIATNNQISDITPL--GILTNL 223
Query: 185 RVFTAYENQL--VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
+ NQL +G L S++ L L+L +NQ+ P
Sbjct: 224 DELSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAP------------------- 260
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCS 302
L G K L+ +++G N + + P A ++ LT E + N L E + S
Sbjct: 261 ------LSGLTK-LTELKLGANQISNISPLA--GLTALTNLELNENQL--EDISPISNLK 309
Query: 303 NLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRF 362
NLT L L N + + P + L LQ L Y N + S+ N+N L +N+
Sbjct: 310 NLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365
Query: 363 NGTIPNAICDMSRLQYL 379
+ P + +++R+ L
Sbjct: 366 SDLTP--LANLTRITQL 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 28/254 (11%)
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA-IGNVSGLTYFEADNNNLSGEIVP 296
+ N+LT P + + L +I + NN + + P A + N++GLT F NN +I P
Sbjct: 76 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLF----NNQITDIDP 129
Query: 297 EFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLD 356
+NL L L+SN + + L L +LQ+L + N + P + L L +LD
Sbjct: 130 -LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLS-FGNQVTDLKPLANLTT--LERLD 183
Query: 357 LSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPP 416
+S+N+ + + + ++ L+ L+ N + P +G L +L + N L
Sbjct: 184 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-----K 234
Query: 417 EIGHIRNLQ--IALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
+IG + +L L+L+ N + P L L KL + NQ+S P L G+ +L
Sbjct: 235 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 290
Query: 475 EVNFSNNLLTGPVP 488
+ + N L P
Sbjct: 291 NLELNENQLEDISP 304
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 135 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFE 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 75
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 130
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 131 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFE 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 73
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 74 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 128
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 187
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 65
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 120
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 179
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 71
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 72 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 126
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 185
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 74
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 75 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 129
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 188
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 78
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 133
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 134 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFE 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 102
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQR-----TATYITELANALSYCHSKRVIH 157
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 158 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFE 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 611 NMIYCGTFSTVYKAVMPSG-----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDN 665
+I G F VYK ++ + + +++K LK+ + + E + + H N
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA--GYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 666 LVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
++R G + +++ Y+ NG L + L E D + + G+A G+ +L
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYL 163
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL-DPSKGTASISAVAGSFGYIPPEYAY 784
++ +H D+++ N+L++++ + + +S++L D + T + S + PE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 785 TMQVTAPGNVYSYGVVLLEILT 806
+ T+ +V+S+G+V+ E++T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 71
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 72 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 126
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-KFPIKWTAP 185
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 20 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 75
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 76 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 130
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-KFPIKWTAP 189
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 65
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 120
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-KFPIKWTAP 179
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 15 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 70
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 71 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 125
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-KFPIKWTAP 184
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 81
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P G + + L + +K + R + +A L++ H +IH
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 136
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 137 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFE 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 76
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 131
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 132 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFE 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 11 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 66
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 67 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 121
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 180
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 65
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 120
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 179
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 83
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 12 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 67
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 68 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 122
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA-KFPIKWTAP 181
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 135 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFE 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + G+ Y+PPE
Sbjct: 135 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFE 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 5 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 60
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 61 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-KFPIKWTAP 174
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ V
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E + +++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 85 EPIYIVIE-YMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G+F VY A + + ++++K++ + +I+E+ L KL H N ++ G +
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
E A L+ Y G+ + LL E K+P + ++ G +GLA+LH +IH D
Sbjct: 125 REHTAWLVMEYC-LGSASDLL-EVHKKPLQEVEIA---AVTHGALQGLAYLHSHNMIHRD 179
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTM---Q 787
+ +GN+LL LG+ G+ASI A A F ++ PE M Q
Sbjct: 180 VKAGNILLSEPGLVKLGDF----------GSASIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 788 VTAPGNVYSYGVVLLEILTTRLPV 811
+V+S G+ +E+ + P+
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPL 253
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 40/250 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
++ I E E + KL H LV+ G + + L+ ++ +G L+ L T++ + +
Sbjct: 66 EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAE 123
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
T L + + V EG+A+L +IH D+++ N L+ + + + +++ + + T+S
Sbjct: 124 --TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 181
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE--------EDFGEG 818
+ + PE + ++ +V+S+GV++ E+ + ++P E ED G
Sbjct: 182 -TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 240
Query: 819 VDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKV 878
L K RL++ ++ C P RP ++
Sbjct: 241 FRLYK-----------------PRLASTH---------VYQIMNHCWKERPEDRPAFSRL 274
Query: 879 VEMLQEIKQN 888
+ L EI ++
Sbjct: 275 LRQLAEIAES 284
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G+F VY A + + ++++K++ + +I+E+ L KL H N ++ G +
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
E A L+ Y G+ + LL E K+P + ++ G +GLA+LH +IH D
Sbjct: 86 REHTAWLVMEYCL-GSASDLL-EVHKKPLQEVEIA---AVTHGALQGLAYLHSHNMIHRD 140
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTM---Q 787
+ +GN+LL LG+ G+ASI A A F ++ PE M Q
Sbjct: 141 VKAGNILLSEPGLVKLGDF----------GSASIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 788 VTAPGNVYSYGVVLLEILTTRLPV 811
+V+S G+ +E+ + P+
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPL 214
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 80
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + ++ + R + +A L++ H +IH
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT-----ATYITELANALSYCHSKRVIH 135
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL ++ GE++I+ ++ + + G+ Y+PPE
Sbjct: 136 RDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L P E
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFE 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + + ++E + + KL H+ LV+ + V+
Sbjct: 196 GCFGEVWMGTWNGTTRVAIKTLKPGNMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 250
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 307
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + + +L++ ++ TA A + PE A + T +V+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 366
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 367 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 422
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 73
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + +K + R + +A L++ H +IH
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT-----ATYITELANALSYCHSKRVIH 128
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL + GE++I+ ++ + + G+ Y+PPE
Sbjct: 129 RDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L + P E
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFE 204
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G FS VY+A + G+ +++K+++ D + I+E++ L +L H N+++ I
Sbjct: 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI 102
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
++ ++ G L++++ KQ P+ T + + L +H ++H D
Sbjct: 103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPER-TVWKYFVQLCSALEHMHSRRVMHRD 161
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
I NV + A LG++ + + SK TA+ S V G+ Y+ PE + ++
Sbjct: 162 IKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLV-GTPYYMSPERIHENGYNFKSDI 219
Query: 795 YSYGVVLLEILTTRLPVEEDFGEGVDL 821
+S G +L E+ + P +G+ ++L
Sbjct: 220 WSLGCLLYEMAALQSPF---YGDKMNL 243
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 18 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 72
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 188
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 189 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 244
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 20 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 74
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 190
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 191 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 246
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 83
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ V
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E + +++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 85 EPIYIVIE-YMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S IL++K L +++ + HQ + RE+E S L H N++R G+
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ--LRREVEIQSHLRHPNILRLYGY 80
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P GT+ + L + ++ + R + +A L++ H +IH
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT-----ATYITELANALSYCHSKRVIH 135
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+LL ++ GE++I+ ++ + G+ Y+PPE
Sbjct: 136 RDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 792 GNVYSYGVVLLEILTTRLPVE 812
+++S GV+ E L P E
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFE 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 40/250 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+ I E E + KL H LV+ G + + L+ ++ +G L+ L T++ + +
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAE 106
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
T L + + V EG+A+L +IH D+++ N L+ + + + +++ + + T+S
Sbjct: 107 --TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE--------EDFGEG 818
+ + PE + ++ +V+S+GV++ E+ + ++P E ED G
Sbjct: 165 -TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 223
Query: 819 VDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKV 878
L K RL++ ++ C P RP ++
Sbjct: 224 FRLYK-----------------PRLASTH---------VYQIMNHCWRERPEDRPAFSRL 257
Query: 879 VEMLQEIKQN 888
+ L EI ++
Sbjct: 258 LRQLAEIAES 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 40/250 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+ I E E + KL H LV+ G + + L+ ++ +G L+ L T++ + +
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAE 103
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
T L + + V EG+A+L +IH D+++ N L+ + + + +++ + + T+S
Sbjct: 104 --TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE--------EDFGEG 818
+ + PE + ++ +V+S+GV++ E+ + ++P E ED G
Sbjct: 162 -TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Query: 819 VDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKV 878
L K RL++ ++ C P RP ++
Sbjct: 221 FRLYK-----------------PRLASTH---------VYQIMNHCWKERPEDRPAFSRL 254
Query: 879 VEMLQEIKQN 888
+ L EI ++
Sbjct: 255 LRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 40/250 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+ I E E + KL H LV+ G + + L+ ++ +G L+ L T++ + +
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAE 101
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
T L + + V EG+A+L +IH D+++ N L+ + + + +++ + + T+S
Sbjct: 102 --TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE--------EDFGEG 818
+ + PE + ++ +V+S+GV++ E+ + ++P E ED G
Sbjct: 160 -TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218
Query: 819 VDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKV 878
L K RL++ ++ C P RP ++
Sbjct: 219 FRLYK-----------------PRLASTH---------VYQIMNHCWKERPEDRPAFSRL 252
Query: 879 VEMLQEIKQN 888
+ L EI ++
Sbjct: 253 LRQLAEIAES 262
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 10/211 (4%)
Query: 598 DLDA--VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIREL 655
D DA + + ++K + G F V+ + ++VK LK ++ + E
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV----QAFLEEA 59
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIA 715
+ L HD LVR V E+ ++ Y+ G+L L + P + +
Sbjct: 60 NLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGG---KVLLPKLIDFS 116
Query: 716 IGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF 775
+AEG+A++ IH D+ + NVL+ + + ++++++ ++ TA A
Sbjct: 117 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA-KFPI 175
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+G++L EI+T
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 83
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 8/191 (4%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ + ++VK LK ++ + E + L HD LVR V
Sbjct: 23 GQFGEVWMGYYNNSTKVAVKTLKPGTMSV----QAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ ++ G+L L + P + + +AEG+A++ IH D+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGG---KVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 135
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ NVL+ + + ++++++ ++ TA A + PE T NV+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGA-KFPIKWTAPEAINFGCFTIKSNVW 194
Query: 796 SYGVVLLEILT 806
S+G++L EI+T
Sbjct: 195 SFGILLYEIVT 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 34/281 (12%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL----KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F V+K ++ ++++K L + +I + RE+ +S L H N+V+
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-- 728
G + + ++ ++P G L L + + W +L + + +A G+ ++ +
Sbjct: 90 GLM--HNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 729 AIIHLDISSGNVLLDA--DFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEY--AY 784
I+H D+ S N+ L + + P+ ++ L S S+S + G+F ++ PE A
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS--VHSVSGLLGNFQWMAPETIGAE 201
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLS 844
T + YS+ ++L ILT P +E + + + R PE RL
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDC-PPRLR 260
Query: 845 TVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
V LC P KRP +V+ L E+
Sbjct: 261 N--------------VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 56 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 114
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 115 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 170
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 171 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 227
Query: 801 LLEILT 806
L E+++
Sbjct: 228 LWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 39 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 97
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 98 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 154 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 801 LLEILT 806
L E+++
Sbjct: 211 LWEVMS 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 34/281 (12%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL----KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F V+K ++ ++++K L + +I + RE+ +S L H N+V+
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-- 728
G + + ++ ++P G L L + + W +L + + +A G+ ++ +
Sbjct: 90 GLM--HNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 729 AIIHLDISSGNVLLDA--DFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEY--AY 784
I+H D+ S N+ L + + P+ ++ + + S+S + G+F ++ PE A
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKV--ADFGTSQQSVHSVSGLLGNFQWMAPETIGAE 201
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLS 844
T + YS+ ++L ILT P +E + + + R PE RL
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDC-PPRLR 260
Query: 845 TVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
V LC P KRP +V+ L E+
Sbjct: 261 N--------------VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 83
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G L L + P + +A +A G+A++ + +H D+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 40/250 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+ I E E + KL H LV+ G + + L+ ++ +G L+ L T++ + +
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR--TQRGLFAAE 104
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
T L + + V EG+A+L +IH D+++ N L+ + + + +++ + + T+S
Sbjct: 105 --TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE--------EDFGEG 818
+ + PE + ++ +V+S+GV++ E+ + ++P E ED G
Sbjct: 163 -TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
Query: 819 VDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKV 878
L K RL++ ++ C P RP ++
Sbjct: 222 FRLYK-----------------PRLASTH---------VYQIMNHCWRERPEDRPAFSRL 255
Query: 879 VEMLQEIKQN 888
+ L EI ++
Sbjct: 256 LRQLAEIAES 265
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + KL H+ LV+ + V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQ-LYAVVS 83
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G L L + P + +A +A G+A++ + +H D+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+ +++K LK + ++E + + K+ H+ LV+ + V+
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKIRHEKLVQ-LYAVVS 83
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ ++ Y+ G+L L + P + +A +A G+A++ + +H D+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
+ N+L+ + + + +++L++ ++ TA A + PE A + T +V+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KFPIKWTAPEAALYGRFTIKSDVW 199
Query: 796 SYGVVLLEILTT-RLPVEEDFG-EGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
S+G++L E+ T R+P E +D V+ + P E PE + D WRK+
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC----WRKD 255
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY-----EDVALL--LHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y +DV L + +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPE 836
P R + E
Sbjct: 241 TPTREQIRE 249
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGLI++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 39 PSGLIMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 93
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L E+ + P+ ++I V GLA+L I+H D+ N+L+
Sbjct: 94 EHMDGGSLDQVLKEAKRIPEE-----ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV 148
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 149 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 201 LSLVELAVGRYPI 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+ I E E + KL H LV+ G + + L+ ++ +G L+ L T++ + +
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAE 103
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
T L + + V EG+A+L ++IH D+++ N L+ + + + +++ + + T+S
Sbjct: 104 --TLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE--------EDFGEG 818
+ + PE + ++ +V+S+GV++ E+ + ++P E ED G
Sbjct: 162 -TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Query: 819 VDLVK 823
L K
Sbjct: 221 FRLYK 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 34/281 (12%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL----KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F V+K ++ ++++K L + +I + RE+ +S L H N+V+
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-- 728
G + + ++ ++P G L L + + W +L + + +A G+ ++ +
Sbjct: 90 GLM--HNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 729 AIIHLDISSGNVLLDA--DFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEY--AY 784
I+H D+ S N+ L + + P+ ++ L S S+S + G+F ++ PE A
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS--VHSVSGLLGNFQWMAPETIGAE 201
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLS 844
T + YS+ ++L ILT P +E + + + R PE RL
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDC-PPRLR 260
Query: 845 TVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
V LC P KRP +V+ L E+
Sbjct: 261 N--------------VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPE 836
P R + E
Sbjct: 241 TPTREQIRE 249
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 19 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 71
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 72 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 129
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 130 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 186
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 187 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 244
Query: 828 APARGETPE 836
P R + E
Sbjct: 245 TPTREQIRE 253
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR 705
+ + E + + H N++R G V +A+++ Y+ NG+L L Q
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSK 763
+ + GV G+ +L + +H D+++ NVL+D++ + + +S++L DP
Sbjct: 152 ----QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD- 206
Query: 764 GTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDL 821
A+ + G + PE ++ +V+S+GVV+ E+L
Sbjct: 207 --AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL---------------- 248
Query: 822 VKWVHGAPARGETPEQILDAR--LSTVSFGWRKEMLTALKVALL-----CTDSTPAKRPK 874
A GE P + R +S+V G+R AL C A+RP+
Sbjct: 249 --------AYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPR 300
Query: 875 MKKVVEMLQEI 885
++V +L +
Sbjct: 301 FSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR 705
+ + E + + H N++R G V +A+++ Y+ NG+L L Q
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSK 763
+ + GV G+ +L + +H D+++ NVL+D++ + + +S++L DP
Sbjct: 152 ----QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD- 206
Query: 764 GTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDL 821
A+ + G + PE ++ +V+S+GVV+ E+L
Sbjct: 207 --AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL---------------- 248
Query: 822 VKWVHGAPARGETPEQILDAR--LSTVSFGWRKEMLTALKVALL-----CTDSTPAKRPK 874
A GE P + R +S+V G+R AL C A+RP+
Sbjct: 249 --------AYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPR 300
Query: 875 MKKVVEMLQEI 885
++V +L +
Sbjct: 301 FSQIVSVLDAL 311
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 602 VVKAT-MKDSNMIYCGTFSTVYKAV-MPSGLILSVK-RLKSMDRTIIHHQN-KMIRELEK 657
++K T +K ++ G F TVYK + +P G + + +K ++ T N + + E
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 70
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG 717
++ + H +LVR +G + + L+ +P+G L + +HE + L+ +
Sbjct: 71 MASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQ----LLLNWCVQ 125
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+A+G+ +L ++H D+++ NVL+ + + + +++LL+ + + +
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ E + + T +V+SYGV + E++T
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPE 836
P R + E
Sbjct: 241 TPTREQIRE 249
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 602 VVKAT-MKDSNMIYCGTFSTVYKAV-MPSGLILSVK-RLKSMDRTIIHHQN-KMIRELEK 657
++K T +K ++ G F TVYK + +P G + + +K ++ T N + + E
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 93
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG 717
++ + H +LVR +G + + L+ +P+G L + +HE + L+ +
Sbjct: 94 MASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQ----LLLNWCVQ 148
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+A+G+ +L ++H D+++ NVL+ + + + +++LL+ + + +
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ E + + T +V+SYGV + E++T
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 101
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 102 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 159
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 160 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 216
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 217 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 274
Query: 828 APARGETPE 836
P R + E
Sbjct: 275 TPTREQIRE 283
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 79
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 80 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 137
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 138 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 194
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 195 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 252
Query: 828 APARGETPE 836
P R + E
Sbjct: 253 TPTREQIRE 261
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 79
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 80 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 137
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 138 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 194
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 195 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 252
Query: 828 APARGETPE 836
P R + E
Sbjct: 253 TPTREQIRE 261
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 34 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 86
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 87 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 144
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 145 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 201
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 202 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 259
Query: 828 APARGETPE 836
P R + E
Sbjct: 260 TPTREQIRE 268
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 23 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 75
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 76 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 133
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 134 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 190
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 191 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 248
Query: 828 APARGETPE 836
P R + E
Sbjct: 249 TPTREQIRE 257
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 16 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 68
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 69 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 126
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 127 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 183
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 184 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 241
Query: 828 APARGETPE 836
P R + E
Sbjct: 242 TPTREQIRE 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 653 RELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRL 712
RE+ S+L H N+V I +D L+ Y+ TL++ + P +
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG---------PLSV 110
Query: 713 SIAIG----VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
AI + +G+ H + I+H DI N+L+D++ + + I+K L + T +
Sbjct: 111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT- 169
Query: 769 SAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
+ V G+ Y PE A ++YS G+VL E+L P
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G V+ ++VK LK + + + E + +L
Sbjct: 10 VPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 65
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 120
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH D+ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGA-KFPIKWTAP 179
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPE 836
P R + E
Sbjct: 241 TPTREQIRE 249
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 66 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 124
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 125 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 180
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 181 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 238 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 275
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 276 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 602 VVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL 661
V + T+K + G F V+ ++VK LK + + + E + +L
Sbjct: 6 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQL 61
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPD-YRPDWPTRLSIAIGVAE 720
H LVR V E + ++ Y+ NG+L L K P + L +A +AE
Sbjct: 62 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+AF+ IH ++ + N+L+ + + +++L++ ++ TA A + P
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-KFPIKWTAP 175
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILTT-RLP 810
E T +V+S+G++L EI+T R+P
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 20 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 72
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 73 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 130
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 131 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 187
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 188 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 245
Query: 828 APARGETPE 836
P R + E
Sbjct: 246 TPTREQIRE 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 28 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 80
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 81 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 138
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 139 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 195
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 196 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 253
Query: 828 APARGETPE 836
P R + E
Sbjct: 254 TPTREQIRE 262
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQGKAFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPEQILDARLSTVSFGW 850
P R EQI + + F +
Sbjct: 241 TPTR----EQIREMNPNYTEFAF 259
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 117/302 (38%), Gaps = 52/302 (17%)
Query: 616 GTFSTVYKAVMPSGL------ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G F V++A P L +++VK LK + Q RE +++ + N+V+
Sbjct: 58 GAFGRVFQARAPGLLPYEPFTMVAVKMLK--EEASADMQADFQREAALMAEFDNPNIVKL 115
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHE--------------STKQPDYRPDWP-----T 710
+G LL Y+ G L + L ST+ P P
Sbjct: 116 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAE 175
Query: 711 RLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA 770
+L IA VA G+A+L +H D+++ N L+ + + + +S+ + + +
Sbjct: 176 QLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 771 VAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPA 830
A ++PPE + + T +V++YGVVL EI + L P
Sbjct: 236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL------------------QPY 277
Query: 831 RGETPEQIL----DARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEIK 886
G E+++ D + E+ ++ LC PA RP + +LQ +
Sbjct: 278 YGMAHEEVIYYVRDGNILACPENCPLELYNLMR---LCWSKLPADRPSFCSIHRILQRMC 334
Query: 887 QN 888
+
Sbjct: 335 ER 336
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 53 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 105
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 106 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 163
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 164 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 220
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 221 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 278
Query: 828 APARGETPEQILDARLSTVSFGW 850
P R EQI + + F +
Sbjct: 279 TPTR----EQIREMNPNYTEFKF 297
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 101
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 102 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 159
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 160 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 216
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 217 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 274
Query: 828 APARGETPE 836
P R + E
Sbjct: 275 TPTREQIRE 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVAL----LLH 683
+G +++VK LK+ H++ +E++ L L H+++++ G ED L+
Sbjct: 59 TGEMVAVKALKA--DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC--EDAGAASLQLVM 114
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
Y+P G+L L P + L A + EG+A+LH IH D+++ NVLLD
Sbjct: 115 EYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD 168
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
D +G+ ++K + + S F Y PE + +V+S+GV L
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTL 227
Query: 802 LEILT 806
E+LT
Sbjct: 228 YELLT 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 51 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 103
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 104 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 161
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 162 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 218
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 219 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 276
Query: 828 APARGETPEQILDARLSTVSFGW 850
P R EQI + + F +
Sbjct: 277 TPTR----EQIREMNPNYTEFKF 295
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 43 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 95
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 96 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 153
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 154 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 210
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 211 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 268
Query: 828 APARGETPE 836
P R + E
Sbjct: 269 TPTREQIRE 277
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 94 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIM 146
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 147 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 204
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 205 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 261
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 262 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 319
Query: 828 APARGETPEQILDARLSTVSFGW 850
P R EQI + + F +
Sbjct: 320 TPTR----EQIREMNPNYTEFKF 338
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + ++++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLARVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 130/312 (41%), Gaps = 41/312 (13%)
Query: 587 NVLVENLRQAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMP----SGLILSVKRLKSMDR 642
N V + ID+ V K +I G F V + + +++K LKS
Sbjct: 20 NEAVREFAKEIDISCV-----KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS--G 72
Query: 643 TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQP 702
+ + E + + H N++ G V +++ ++ NG+L L +Q
Sbjct: 73 YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL----RQN 128
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
D + + + G+A G+ +L + +H D+++ N+L++++ + + +S+ L+
Sbjct: 129 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 763 KGTASISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGE 817
+ ++ G G IP PE + T+ +V+SYG+V+ E+++ +GE
Sbjct: 189 TSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS--------YGE 238
Query: 818 GVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALL-CTDSTPAKRPKMK 876
P T + +++A + +AL +L C RPK
Sbjct: 239 ----------RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFG 288
Query: 877 KVVEMLQEIKQN 888
++V L ++ +N
Sbjct: 289 QIVNTLDKMIRN 300
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPN 688
L ++VK LKS + ++ EL+ +S L H+N+V +G + L++ Y
Sbjct: 69 LKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 126
Query: 689 GTLAQLLHESTK----QPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
G L L + + D RP + L + VA+G+AFL IH D+++ NVLL
Sbjct: 127 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 186
Query: 744 ADFKPLLGEIEISK-LLDPS----KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYG 798
+G+ +++ +++ S KG A + ++ PE + T +V+SYG
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-----KWMAPESIFDCVYTVQSDVWSYG 241
Query: 799 VVLLEILT 806
++L EI +
Sbjct: 242 ILLWEIFS 249
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 30/263 (11%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQGKAFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPEQILDARLSTVSFGW 850
P R EQI + + F +
Sbjct: 241 TPTR----EQIREMNPNYTEFAF 259
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SKL H N+V
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKLNHQNIV 111
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 167
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 168 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 225
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 226 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 587 NVLVENLRQAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMPS-GLILSVKRLKSMDRTII 645
N V + ID+ V K +I G F V + + + G S +K++
Sbjct: 3 NEAVREFAKEIDVSYV-----KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT 57
Query: 646 HHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDY 704
Q + + E + + H N++R G V ++L ++ NG L L + Q
Sbjct: 58 ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV 117
Query: 705 RPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG 764
+ + G+A G+ +L ++ +H D+++ N+L++++ + + +S+ L+ +
Sbjct: 118 ----IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 173
Query: 765 TASISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ G G IP PE + T+ + +SYG+V+ E+++
Sbjct: 174 DPTETSSLG--GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG 689
++++VK LK + RE E L+ L H+++V+ G + D +++ Y+ +G
Sbjct: 44 ILVAVKTLKDASDNA---RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 690 TLAQLLH----ESTKQPDYRPDWPTRLS------IAIGVAEGLAFLHHVAIIHLDISSGN 739
L + L ++ + P PT L+ IA +A G+ +L +H D+++ N
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNP--PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRN 158
Query: 740 VLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGV 799
L+ + +G+ +S+ + + ++PPE + T +V+S GV
Sbjct: 159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV 218
Query: 800 VLLEILT 806
VL EI T
Sbjct: 219 VLWEIFT 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPN 688
L ++VK LKS + ++ EL+ +S L H+N+V +G + L++ Y
Sbjct: 77 LKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 689 GTLAQLLHESTK----QPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
G L L + + D RP + L + VA+G+AFL IH D+++ NVLL
Sbjct: 135 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 194
Query: 744 ADFKPLLGEIEISK-LLDPS----KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYG 798
+G+ +++ +++ S KG A + ++ PE + T +V+SYG
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-----KWMAPESIFDCVYTVQSDVWSYG 249
Query: 799 VVLLEILT 806
++L EI +
Sbjct: 250 ILLWEIFS 257
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SKL H N+V
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKLNHQNIV 97
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 153
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 154 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 211
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 212 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 124/273 (45%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ NG+L L ++ D + + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 YMENGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + + ++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLGRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 96
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 152
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 210
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 211 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 111
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 167
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 168 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 225
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 226 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 600 DAVVKATMKDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKL 658
D + + D+ +I G+F VY+A + SG ++++K+ ++ + REL+ +
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-------VLQGKAFKNRELQIM 67
Query: 659 SKLCHDNLVRPIGFVIY------EDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
KL H N+VR + + Y ++V L L+ +Y+P T+ ++ ++ P +
Sbjct: 68 RKLDHCNIVR-LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISA 770
L + + LA++H I H DI N+LLD D L L + +K L +G ++S
Sbjct: 126 LYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSY 182
Query: 771 VAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
+ + Y PE + T+ +V+S G VL E+L + P + + V+++K V G
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-VLG 240
Query: 828 APARGETPE 836
P R + E
Sbjct: 241 TPTREQIRE 249
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG 689
++++VK LK D T+ ++ RE E L+ L H+++V+ G D +++ Y+ +G
Sbjct: 46 MLVAVKALK--DPTLAARKD-FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 690 TLAQLLHESTKQPDYRPDWPTR-----------LSIAIGVAEGLAFLHHVAIIHLDISSG 738
L + L D R L IA +A G+ +L +H D+++
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 162
Query: 739 NVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYG 798
N L+ A+ +G+ +S+ + + ++PPE + T +V+S+G
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 222
Query: 799 VVLLEILT 806
V+L EI T
Sbjct: 223 VILWEIFT 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 607 MKDSNMIYCGTFSTVYKAVMPS-GLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHD 664
+K +I G F V + + + G S +K++ Q + + E + + H
Sbjct: 16 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 75
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N++R G V ++L ++ NG L L + Q + + G+A G+ +
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRY 131
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP----- 779
L ++ +H D+++ N+L++++ + + +S+ L+ + + ++ G G IP
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG--GKIPIRWTA 189
Query: 780 PEYAYTMQVTAPGNVYSYGVVLLEILT 806
PE + T+ + +SYG+V+ E+++
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 177/448 (39%), Gaps = 101/448 (22%)
Query: 88 LKRLDLSNNAFSGT-IPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
LK LDLS NAF I FGN+S+L+FL LS E S+ + NIS +L
Sbjct: 92 LKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHL------EKSSVLPIAHLNISKVLL 145
Query: 147 V-GEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSV 205
V GE E + E L+DF S L+ P T E + ++ ++ +V
Sbjct: 146 VLGETYGEKEDPEGLQDFNTES--LHIVFP------------TNKEFHFILDV--SVKTV 189
Query: 206 SELELLN----LHSNQLEG--PIPKSIFASGKLEVLVLTQNRLTGD----IPELVGHCK- 254
+ LEL N L N+ I + + KL L L T + I +LV H
Sbjct: 190 ANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTV 249
Query: 255 ---SLSNIRIGNN------DLVGV------IPRAIGNVSG---------LTYFEADNNNL 290
S+SN+++ D G I + + +V G + N +
Sbjct: 250 WYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTV 309
Query: 291 SGEIVPEF---SQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSIL 347
SG + S+ S L+ ++N T + G L L+ LIL N L
Sbjct: 310 SGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL--------- 360
Query: 348 ACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNC---MKLLQLH 404
K L+K I M LQ L + QNS+ + + G+C LL L+
Sbjct: 361 --KELSK-----------IAEMTTQMKSLQQLDISQNSVSYD--EKKGDCSWTKSLLSLN 405
Query: 405 IGSNYLTGSI----PPEIGHIRNLQIALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLS 460
+ SN LT +I PP I L+L N + S+P ++ KL+ L +V++NQL
Sbjct: 406 MSSNILTDTIFRCLPPRIK-------VLDLHSNKI-KSIPKQVVKLEALQELNVASNQLK 457
Query: 461 GTIPSALKGMLSLIEVNFSNNLLTGPVP 488
+ SL ++ N P
Sbjct: 458 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 83 SELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV--IPRELGSLKDLRFFN 140
S++ LD SNN + T+ G+L+ELE L L +N+ + I +K L+ +
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 141 IS-NNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIP 199
IS N+V E + + L +SSN L +I + ++V + N+ + IP
Sbjct: 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNK-IKSIP 437
Query: 200 DNLGSVSELELLNLHSNQLEGPIPKSIF 227
+ + L+ LN+ SNQL+ +P IF
Sbjct: 438 KQVVKLEALQELNVASNQLKS-VPDGIF 464
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 192 NQLVGEIPDNLGSVSELELLNLHSNQLE--GPIPKSIFASGKLEVLVLTQNRLTGDIPEL 249
N L + +N G ++ELE L L NQL+ I + L+ L ++QN ++ D E
Sbjct: 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYD--EK 391
Query: 250 VGHC---KSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTL 306
G C KSL ++ + +N L I R + + + +N + I + + L
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKS-IPKQVVKLEALQE 448
Query: 307 LNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNK 354
LN+ASN V +L +LQ++ L+ N P+ + LNK
Sbjct: 449 LNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 496
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 25/188 (13%)
Query: 650 KMIRELEKLSKLCHDNLV---------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK 700
+ RE + + L H +V P G + Y ++ Y+ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY-----IVMEYVDGVTLRDIVHTEG- 111
Query: 701 QPDYRPDWPTR-LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL 759
P P R + + + L F H IIH D+ N+++ A + + I++ +
Sbjct: 112 -----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 760 -DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEG 818
D +AV G+ Y+ PE A V A +VYS G VL E+LT P G+
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT---GDS 223
Query: 819 VDLVKWVH 826
D V + H
Sbjct: 224 PDSVAYQH 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPN 688
L ++VK LKS + ++ EL+ +S L H+N+V +G + L++ Y
Sbjct: 77 LKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 689 GTLAQLLHESTKQPDYRPDWP-------TR--LSIAIGVAEGLAFLHHVAIIHLDISSGN 739
G L L ++ + P + TR L + VA+G+AFL IH D+++ N
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 740 VLLDADFKPLLGEIEISK-LLDPS----KGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
VLL +G+ +++ +++ S KG A + ++ PE + T +V
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-----KWMAPESIFDCVYTVQSDV 249
Query: 795 YSYGVVLLEILT 806
+SYG++L EI +
Sbjct: 250 WSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPN 688
L ++VK LKS + ++ EL+ +S L H+N+V +G + L++ Y
Sbjct: 77 LKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 689 GTLAQLLHESTKQPDYRPDWP-------TR--LSIAIGVAEGLAFLHHVAIIHLDISSGN 739
G L L ++ + P + TR L + VA+G+AFL IH D+++ N
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 740 VLLDADFKPLLGEIEISK-LLDPS----KGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
VLL +G+ +++ +++ S KG A + ++ PE + T +V
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-----KWMAPESIFDCVYTVQSDV 249
Query: 795 YSYGVVLLEILT 806
+SYG++L EI +
Sbjct: 250 WSYGILLWEIFS 261
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 96
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 152
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 210
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 211 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 33 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 88
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 144
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 145 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 202
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 203 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 647 HQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP 706
+ + E + + H N++ G V +++ Y+ NG+L L ++ D R
Sbjct: 52 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----DGRF 107
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSKG 764
+ + G+ G+ +L ++ +H D+++ N+L++++ + + +S++L DP
Sbjct: 108 TVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-- 165
Query: 765 TASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLV 822
A+ + G + PE + T+ +V+SYG+V+ E+++ +GE
Sbjct: 166 -AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--------YGE----- 211
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWR----KEMLTALKVALL-CTDSTPAKRPKMKK 877
P + + ++ A + G+R + AL +L C + RPK +
Sbjct: 212 -----RPYWDMSNQDVIKA----IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 262
Query: 878 VVEMLQEIKQN 888
+V ML ++ +N
Sbjct: 263 IVNMLDKLIRN 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 647 HQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP 706
+ + E + + H N++ G V +++ Y+ NG+L L ++ D R
Sbjct: 58 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----DGRF 113
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSKG 764
+ + G+ G+ +L ++ +H D+++ N+L++++ + + +S++L DP
Sbjct: 114 TVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-- 171
Query: 765 TASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLV 822
A+ + G + PE + T+ +V+SYG+V+ E+++ +GE
Sbjct: 172 -AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--------YGE----- 217
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWR----KEMLTALKVALL-CTDSTPAKRPKMKK 877
P + + ++ A + G+R + AL +L C + RPK +
Sbjct: 218 -----RPYWDMSNQDVIKA----IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 268
Query: 878 VVEMLQEIKQN 888
+V ML ++ +N
Sbjct: 269 IVNMLDKLIRN 279
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 39/215 (18%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 59 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 114
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 170
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF------ 775
+L IH DI++ N LL G ++K+ D G A AG +
Sbjct: 171 CQYLEENHFIHRDIAARNCLLTCP-----GPGRVAKIGD--FGMARDIYRAGYYRKGGCA 223
Query: 776 ----GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 647 HQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP 706
+ + E + + H N++ G V +++ Y+ NG+L L ++ D R
Sbjct: 73 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----DGRF 128
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSKG 764
+ + G+ G+ +L ++ +H D+++ N+L++++ + + +S++L DP
Sbjct: 129 TVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-- 186
Query: 765 TASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLV 822
A+ + G + PE + T+ +V+SYG+V+ E+++ +GE
Sbjct: 187 -AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--------YGE----- 232
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWR----KEMLTAL-KVALLCTDSTPAKRPKMKK 877
P + + ++ A + G+R + AL ++ L C + RPK +
Sbjct: 233 -----RPYWDMSNQDVIKA----IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 283
Query: 878 VVEMLQEIKQN 888
+V ML ++ +N
Sbjct: 284 IVNMLDKLIRN 294
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 97
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 153
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 154 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 211
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 212 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 39/215 (18%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 137
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 193
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF------ 775
+L IH DI++ N LL G ++K+ D G A AG +
Sbjct: 194 CQYLEENHFIHRDIAARNCLLTCP-----GPGRVAKIGD--FGMARDIYRAGYYRKGGCA 246
Query: 776 ----GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 41 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 96
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 151
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A +A G+ Y+ PE
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 212 SSDLWALGCIIYQLVA 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 97
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 153
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 154 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-- 211
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 212 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 113
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 169
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 170 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 227
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 228 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 103
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 159
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 160 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 217
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 218 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VYSEQDELDFLMEALIISKFNHQNIV 111
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 167
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 168 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 225
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 226 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 39 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 97
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 98 XMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 154 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 801 LLEILT 806
L E+++
Sbjct: 211 LWEVMS 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 48 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 102
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 103 EHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 157
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 158 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 209
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 210 LSLVEMAVGRYPI 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 43 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 98
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 153
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A ++ G+ Y+ PE +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 214 SSDLWALGCIIYQLVA 229
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 616 GTFSTVYKA----VMPS--GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G F V+ A ++P ++++VK LK + + RE E L+ L H ++VR
Sbjct: 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA---RQDFQREAELLTMLQHQHIVRF 108
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR--------PDWP----TRLSIAIG 717
G L++ Y+ +G L + L + PD + P L++A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
VA G+ +L + +H D+++ N L+ +G+ +S+ + + +
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+PPE + T +V+S+GVVL EI T
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 616 GTFSTVYKA----VMPS--GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G F V+ A ++P ++++VK LK + + RE E L+ L H ++VR
Sbjct: 23 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA---RQDFQREAELLTMLQHQHIVRF 79
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR---------PDWP----TRLSIAI 716
G L++ Y+ +G L + L + PD + P P L++A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPG-PLGLGQLLAVAS 136
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG 776
VA G+ +L + +H D+++ N L+ +G+ +S+ + +
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE + T +V+S+GVVL EI T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 56 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 110
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 165
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 166 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 217
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 218 LSLVEMAVGRYPI 230
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKL--SKLCHDNLV 667
G F VY+ + PS L ++VK L + Q+++ +E L SK H N+V
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIV 123
Query: 668 RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS------IAIGVAEG 721
R IG + +L + G L L E+ RP P+ L+ +A +A G
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----RPSQPSSLAMLDLLHVARDIACG 179
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEI-------EISKLLDPSKGTASISAVAGS 774
+L IH DI++ N LL + +I +I + KG ++ V
Sbjct: 180 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-- 237
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE T+ + +S+GV+L EI +
Sbjct: 238 --WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ +E + + KL H LV+ G E ++ Y+ NG L L K +
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLE---- 102
Query: 708 WPTRL-SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISK-LLDPSKGT 765
P++L + V EG+AFL IH D+++ N L+D D + + +++ +LD
Sbjct: 103 -PSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--- 158
Query: 766 ASISAVAGSF--GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+S+V F + PE + + ++ +V+++G+++ E+ +
Sbjct: 159 -YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 29 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 83
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 139 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 191 LSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 29 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 83
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 139 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 191 LSLVEMAVGRYPI 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 XMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILT 806
L E+++
Sbjct: 240 LWEVMS 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 616 GTFSTVYKA----VMPS--GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G F V+ A ++P ++++VK LK + + RE E L+ L H ++VR
Sbjct: 29 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA---RQDFQREAELLTMLQHQHIVRF 85
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR---------PDWP----TRLSIAI 716
G L++ Y+ +G L + L + PD + P P L++A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPG-PLGLGQLLAVAS 142
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG 776
VA G+ +L + +H D+++ N L+ +G+ +S+ + +
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++PPE + T +V+S+GVVL EI T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 122/273 (44%), Gaps = 40/273 (14%)
Query: 626 MPSGLILSVKRLKSMDRTIIHHQNK-MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHN 684
+PS +SV +K++ Q + + E + + H N++R G V +++
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
+ NG+L L + Q + + G+A G+ +L + +H D+++ N+L+++
Sbjct: 127 XMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 745 DFKPLLGEIEISKLL--DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVV 800
+ + + +S++L DP A+ + G + PE + T+ +V+SYG+V
Sbjct: 183 NLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWR----KEMLT 856
L E+++ +GE P + + ++ A V G+R +
Sbjct: 240 LWEVMS--------YGE----------RPYWEMSNQDVIKA----VDEGYRLPPPMDCPA 277
Query: 857 AL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
AL ++ L C RPK +++V +L ++ +N
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVA----LLLH 683
+G +++VK LK+ H++ +E++ L L H+++++ G ED L+
Sbjct: 42 TGEMVAVKALKA--DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCC--EDQGEKSLQLVM 97
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
Y+P G+L L P + L A + EG+A+LH IH ++++ NVLLD
Sbjct: 98 EYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLD 151
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
D +G+ ++K + + S F Y PE + +V+S+GV L
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTL 210
Query: 802 LEILT 806
E+LT
Sbjct: 211 YELLT 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPN 688
L ++VK LKS + ++ EL+ +S L H+N+V +G + L++ Y
Sbjct: 77 LKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 689 GTLAQLLH-------ESTKQPDYRPD--WPTR--LSIAIGVAEGLAFLHHVAIIHLDISS 737
G L L E + P + P+ +R L + VA+G+AFL IH D+++
Sbjct: 135 GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAA 194
Query: 738 GNVLLDADFKPLLGEIEISK-LLDPS----KGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
NVLL +G+ +++ +++ S KG A + ++ PE + T
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-----KWMAPESIFDCVYTVQS 249
Query: 793 NVYSYGVVLLEILT 806
+V+SYG++L EI +
Sbjct: 250 DVWSYGILLWEIFS 263
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 91 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 145
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 146 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 200
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 201 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 252
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 253 LSLVEMAVGRYPI 265
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 40 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 95
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 150
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A ++ G+ Y+ PE
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 211 SSDLWALGCIIYQLVA 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 29 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 83
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 139 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 191 LSLVEMAVGRYPI 203
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVA----LLLH 683
+G +++VK LK+ H++ +E++ L L H+++++ G ED L+
Sbjct: 42 TGEMVAVKALKA--DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCC--EDQGEKSLQLVM 97
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD 743
Y+P G+L L P + L A + EG+A+LH IH ++++ NVLLD
Sbjct: 98 EYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLD 151
Query: 744 ADFKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVL 801
D +G+ ++K + + S F Y PE + +V+S+GV L
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTL 210
Query: 802 LEILT 806
E+LT
Sbjct: 211 YELLT 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP-- 706
+++++E++ +S+ H N+V + +D L+ L G++ ++ + +++
Sbjct: 58 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
Query: 707 -DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT 765
D T +I V EGL +LH IH D+ +GN+LL D + + +S L + G
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL-ATGGD 176
Query: 766 ASISAVAGSF----GYIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTRLP 810
+ + V +F ++ PE ++ +++S+G+ +E+ T P
Sbjct: 177 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 29 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 83
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 139 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 191 LSLVEMAVGRYPI 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 44 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 99
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 154
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A ++ G+ Y+ PE
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 215 SSDLWALGCIIYQLVA 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 29 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 83
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I ++A SF Y+ PE + +++S G
Sbjct: 139 NSR-----GEI---KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 799 VVLLEILTTRLPV 811
+ L+E+ R P+
Sbjct: 191 LSLVEMAVGRYPI 203
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 650 KMIRELEKLSKLCHDNLV---------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK 700
+ RE + + L H +V P G + Y ++ Y+ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY-----IVMEYVDGVTLRDIVHTEG- 111
Query: 701 QPDYRPDWPTR-LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL 759
P P R + + + L F H IIH D+ N+L+ A + + I++ +
Sbjct: 112 -----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI 166
Query: 760 -DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
D +AV G+ Y+ PE A V A +VYS G VL E+LT P D
Sbjct: 167 ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 43 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 98
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 153
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 214 SSDLWALGCIIYQLVA 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 650 KMIRELEKLSKLCHDNLV---------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK 700
+ RE + + L H +V P G + Y ++ Y+ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY-----IVMEYVDGVTLRDIVHTEG- 111
Query: 701 QPDYRPDWPTR-LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL 759
P P R + + + L F H IIH D+ N+++ A + + I++ +
Sbjct: 112 -----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 760 -DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
D +AV G+ Y+ PE A V A +VYS G VL E+LT P D
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 43 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 98
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 153
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 214 SSDLWALGCIIYQLVA 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 25 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 80
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 135
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 196 SSDLWALGCIIYQLVA 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 19 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 74
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 129
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 190 SSDLWALGCIIYQLVA 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 40 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 95
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 150
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 211 SSDLWALGCIIYQLVA 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 18 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 73
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 128
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 189 SSDLWALGCIIYQLVA 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 20 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 75
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 130
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 191 SSDLWALGCIIYQLVA 206
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 598 DLDAVVKATMKD------------SNMIYCGTFSTVYKAVMPSGLILSVK-RLKSMDR-T 643
DLD+ + A +KD +I G F VY ++ +KS+ R T
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT 61
Query: 644 IIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQLLHESTKQP 702
+ +RE + L H N++ IG ++ E + +L Y+ +G L Q + + P
Sbjct: 62 EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI----RSP 117
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISK-LLDP 761
P +S + VA G+ +L +H D+++ N +LD F + + +++ +LD
Sbjct: 118 QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177
Query: 762 SKGTASISAVAG-SFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVD 820
+ A + E T + T +V+S+GV+L E+LT P + D
Sbjct: 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFD 236
Query: 821 LVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVE 880
L ++ R PE D + +V C ++ PA RP + +V
Sbjct: 237 LTHFL-AQGRRLPQPEYCPD---------------SLYQVMQQCWEADPAVRPTFRVLVG 280
Query: 881 MLQEI 885
+++I
Sbjct: 281 EVEQI 285
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 38/240 (15%)
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG 717
+ + H N++ G V +++ Y+ NG+L L K+ D + + + G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGMLRG 132
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSKGTASISAVAGS- 774
++ G+ +L + +H D+++ N+L++++ + + +S++L DP A+ + G
Sbjct: 133 ISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE---AAYTTRGGKI 189
Query: 775 -FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGE 833
+ PE + T+ +V+SYG+V+ E+++ +GE P
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS--------YGE----------RPYWEM 231
Query: 834 TPEQILDARLSTVSFGWR----KEMLTAL-KVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
T + ++ A V G+R + AL ++ L C RPK ++V ML ++ +N
Sbjct: 232 TNQDVIKA----VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 43 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 98
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 153
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 214 SSDLWALGCIIYQLVA 229
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 650 KMIRELEKLSKLCHDNLV---------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK 700
+ RE + + L H +V P G + Y ++ Y+ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPY-----IVMEYVDGVTLRDIVHTEG- 111
Query: 701 QPDYRPDWPTR-LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL 759
P P R + + + L F H IIH D+ N+++ A + + I++ +
Sbjct: 112 -----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 760 -DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
D +AV G+ Y+ PE A V A +VYS G VL E+LT P D
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 48 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 103
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 158
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 219 SSDLWALGCIIYQLVA 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP-- 706
+++++E++ +S+ H N+V + +D L+ L G++ ++ + +++
Sbjct: 53 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 112
Query: 707 -DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT 765
D T +I V EGL +LH IH D+ +GN+LL D + + +S L + G
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL-ATGGD 171
Query: 766 ASISAVAGSF----GYIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTRLP 810
+ + V +F ++ PE ++ +++S+G+ +E+ T P
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 650 KMIRELEKLSKLCHDNLV---------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK 700
+ RE + + L H +V P G + Y ++ Y+ TL ++H
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY-----IVMEYVDGVTLRDIVHTEG- 128
Query: 701 QPDYRPDWPTR-LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL 759
P P R + + + L F H IIH D+ N+++ A + + I++ +
Sbjct: 129 -----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 183
Query: 760 -DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
D +AV G+ Y+ PE A V A +VYS G VL E+LT P D
Sbjct: 184 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 41 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 96
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 151
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 212 SSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 44 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 99
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 154
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 215 SSDLWALGCIIYQLVA 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 114/263 (43%), Gaps = 28/263 (10%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG 689
+ +++K LKS + + E + + H N++ G V +++ ++ NG
Sbjct: 36 IFVAIKTLKS--GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 93
Query: 690 TLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPL 749
+L L +Q D + + + G+A G+ +L + +H +++ N+L++++
Sbjct: 94 SLDSFL----RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCK 149
Query: 750 LGEIEISKLL-DPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ + +S+ L D + SA+ G + PE + T+ +V+SYG+V+ E+++
Sbjct: 150 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
Query: 807 TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALL-CT 865
+GE P T + +++A + +AL +L C
Sbjct: 210 --------YGE----------RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW 251
Query: 866 DSTPAKRPKMKKVVEMLQEIKQN 888
RPK ++V L ++ +N
Sbjct: 252 QKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 43 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 98
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 153
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 214 SSDLWALGCIIYQLVA 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 650 KMIRELEKLSKLCHDNLV---------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK 700
+ RE + + L H +V P G + Y ++ Y+ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY-----IVMEYVDGVTLRDIVHTEG- 111
Query: 701 QPDYRPDWPTR-LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL 759
P P R + + + L F H IIH D+ N+++ A + + I++ +
Sbjct: 112 -----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
Query: 760 -DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
D +AV G+ Y+ PE A V A +VYS G VL E+LT P D
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 41 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 96
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 151
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 212 SSDLWALGCIIYQLVA 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 43 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 98
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 153
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 214 SSDLWALGCIIYQLVA 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 21 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 76
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 131
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 192 SSDLWALGCIIYQLVA 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FSTV V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 46 GSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 101
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 156
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 217 SSDLWALGCIIYQLVA 232
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 110/289 (38%), Gaps = 53/289 (18%)
Query: 616 GTFSTVYKAVMPS-----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
GTF+ ++K V L + LK +D+ ++ +SKL H +LV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G + D +L+ ++ G+L L ++ + W +L +A +A + FL +
Sbjct: 79 GVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL--W--KLEVAKQLAAAMHFLEENTL 134
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA--VAGSFGYIPPEYAYTMQV 788
IH ++ + N+LL + G KL DP + + ++PPE +
Sbjct: 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC-----I 189
Query: 789 TAPGNV------YSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDAR 842
P N+ +S+G L EI + G+ P LD++
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG------------------------GDKPLSALDSQ 225
Query: 843 LSTVSFGWRKEMLTALKVALL------CTDSTPAKRPKMKKVVEMLQEI 885
+ F + L A K A L C D P RP + ++ L +
Sbjct: 226 -RKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 630 LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPN 688
L ++VK LKS + ++ EL+ +S L H+N+V +G + L++ Y
Sbjct: 62 LKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 119
Query: 689 GTLAQLLH-----------------ESTKQPDYRP-DWPTRLSIAIGVAEGLAFLHHVAI 730
G L L E + D RP + L + VA+G+AFL
Sbjct: 120 GDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC 179
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISK-LLDPS----KGTASISAVAGSFGYIPPEYAYT 785
IH D+++ NVLL +G+ +++ +++ S KG A + ++ PE +
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-----KWMAPESIFD 234
Query: 786 MQVTAPGNVYSYGVVLLEILT 806
T +V+SYG++L EI +
Sbjct: 235 CVYTVQSDVWSYGILLWEIFS 255
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKR-LKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPIG 671
G+FST V+ L S + +K +++ I +NK+ RE + +S+L H V+ +
Sbjct: 41 GSFSTT---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LY 96
Query: 672 FVIYEDVALLLH-NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
F +D L +Y NG L + + ++ + TR A + L +LH I
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA-EIVSALEYLHGKGI 151
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH D+ N+LL+ D + + +K+L P A + G+ Y+ PE
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 791 PGNVYSYGVVLLEILT 806
++++ G ++ +++
Sbjct: 212 SSDLWALGCIIYQLVA 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSM--DRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F TV+K V +P G + + + D++ + + + L H ++VR +G
Sbjct: 42 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL 101
Query: 673 VIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+ L+ YLP G+L + H P +W + +A+G+ +L +
Sbjct: 102 CPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLEEHGM 154
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
+H ++++ NVLL + + + + ++ LL P S ++ E + + T
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 214
Query: 791 PGNVYSYGVVLLEILT 806
+V+SYGV + E++T
Sbjct: 215 QSDVWSYGVTVWELMT 230
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 607 MKDSNMIYCGTFSTVYKA-VMPSGLIL--SVKRLKSMDRTIIHHQNKMIRELEKLSKLCH 663
+K ++I G F V KA + GL + ++KR+K H ELE L KL H
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD--FAGELEVLCKLGH 84
Query: 664 D-NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHEST---KQPDYRPDWPTR-------- 711
N++ +G + L Y P+G L L +S P + T
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
L A VA G+ +L IH D+++ N+ L+GE ++K+ D V
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNI--------LVGENYVAKIADFGLSRGQEVYV 196
Query: 772 AGSFGYIPPEYA------YTMQVTAPGNVYSYGVVLLEILT 806
+ G +P + Y++ T +V+SYGV+L EI++
Sbjct: 197 KKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSM--DRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F TV+K V +P G + + + D++ + + + L H ++VR +G
Sbjct: 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL 83
Query: 673 VIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+ L+ YLP G+L + H P +W + +A+G+ +L +
Sbjct: 84 CPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLEEHGM 136
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
+H ++++ NVLL + + + + ++ LL P S ++ E + + T
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 196
Query: 791 PGNVYSYGVVLLEILT 806
+V+SYGV + E++T
Sbjct: 197 QSDVWSYGVTVWELMT 212
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 123
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 124 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 179
Query: 755 ISK-LLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
+++ +LD K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 180 LARDMLD--KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 811 VEED 814
D
Sbjct: 238 PYPD 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 607 MKDSNMIYCGTFSTVYKA-VMPSGLIL--SVKRLKSMDRTIIHHQNKMIRELEKLSKLCH 663
+K ++I G F V KA + GL + ++KR+K H ELE L KL H
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD--FAGELEVLCKLGH 74
Query: 664 D-NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHEST---KQPDYRPDWPTR-------- 711
N++ +G + L Y P+G L L +S P + T
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
L A VA G+ +L IH D+++ N+ L+GE ++K+ D V
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNI--------LVGENYVAKIADFGLSRGQEVYV 186
Query: 772 AGSFGYIPPEYA------YTMQVTAPGNVYSYGVVLLEILT 806
+ G +P + Y++ T +V+SYGV+L EI++
Sbjct: 187 KKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 226
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 118
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS 178
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 179 VGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 62/226 (27%)
Query: 681 LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA--IIHLDISSG 738
L+ +++P G+L +LHE T ++ D + A+ +A G+AFLH + I ++S
Sbjct: 86 LITHWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSR 142
Query: 739 NVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP------- 791
+V++D D TA IS F + P Y AP
Sbjct: 143 SVMIDEDM------------------TARISMADVKFSFQSPGRMYAPAWVAPEALQKKP 184
Query: 792 -------GNVYSYGVVLLEILTTRLPVEE----DFGEGVDLVKWVHGAPARGETPEQILD 840
+++S+ V+L E++T +P + + G V L G P
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL---------EGLRP----- 230
Query: 841 ARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEIK 886
T+ G + +K+ C + PAKRPK +V +L++++
Sbjct: 231 ----TIPPGISPHVSKLMKI---CMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 219/539 (40%), Gaps = 91/539 (16%)
Query: 85 LKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSL--KDLRFFNI 141
LKAL RLDLS N S + +FG L+ L+ +D S N+ V EL L K L FF++
Sbjct: 122 LKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181
Query: 142 SNNVLVGEIP-DELKSLEK-----LEDFQVSSNKLNGSIPFWVGNLTN-LRVFTAYENQL 194
+ N L + D K + LE VS N I GN +N + A+ L
Sbjct: 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDI---TGNFSNAISKSQAFSLIL 238
Query: 195 VGEI------------PDN-------LGSVSELELLNLHSNQLEGPIPKSIFASGK-LEV 234
I PD SV L+L S+ + +F + K L+V
Sbjct: 239 AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDL----SHGFVFSLNSRVFETLKDLKV 294
Query: 235 LVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEI 294
L L N++ E +L + + N L + + + Y + N+++
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 295 VPEFSQCSNLTLLNLASNGFTGV--IP--PEL----GQLINLQE-------LILYENSLF 339
F L L+L N T + IP P++ +L+ L + + L EN L
Sbjct: 355 DQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLE 414
Query: 340 G-EIPKSILACKNLNKLDLSNNRFNGTIPNAI-CDMSRLQYLLLGQNSLK----GEIPHE 393
+I +L +L L L+ NRF+ + + L+ L LG+N L+ E+ +
Sbjct: 415 NLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474
Query: 394 IGNCMKLLQ-LHIGSNYLTGSIPPEI-GHIRNLQIALNLSFNHL----HGSLPPELGKLD 447
+ + LQ L++ NYL S+PP + H+ L+ L+L+ N L H LP L L
Sbjct: 475 VFEGLSHLQVLYLNHNYL-NSLPPGVFSHLTALR-GLSLNSNRLTVLSHNDLPANLEIL- 531
Query: 448 KLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVPFQKSPNSSFFGNKG- 506
D+S NQL P LS++++ + + + +F+ + N + G
Sbjct: 532 -----DISRNQLLAPNPDVFVS-LSVLDITHNKFICECELSTFINWLNHTNVTIAGPPAD 585
Query: 507 -LCGEPLSFS-----CGNANGPDSKNYRHRVSYRIILAVVGSGLAVFISVTVVVLLFMM 559
C P SFS + G D + + + ++FI TV + LF+M
Sbjct: 586 IYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKF-----------SLFIVCTVTLTLFLM 633
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 369 AICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--I 426
A ++ L+ L LG + + P L +L + L+ ++ + G+ RNL+
Sbjct: 68 AFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKD-GYFRNLKALT 126
Query: 427 ALNLSFNHLHG-SLPPELGKLDKLVSFDVSNNQL 459
L+LS N + L P GKL+ L S D S+NQ+
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 131/337 (38%), Gaps = 26/337 (7%)
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASG--KLEVLVL 237
NL NLR+ +++ PD + L L L+ L + K + L L L
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 238 TQNRLTG-DIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSG--LTYFEADNNNLSGEI 294
++N++ + G SL +I +N + V + + G L++F N+L +
Sbjct: 131 SKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRV 190
Query: 295 VPEFSQCSN------LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILA 348
++ +C N L +L+++ NG+T I I+ + + L I +
Sbjct: 191 SVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQA--FSLILAHHIMGAGFG 248
Query: 349 CKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSN 408
N+ D N F G +++ + + NS E + +K+L L N
Sbjct: 249 FHNIK--DPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKD----LKVLNL--AYN 300
Query: 409 YLTGSIPPEIGHIRNLQIALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALK 468
+ + NLQ+ LNLS+N L L K+ D+ N ++ K
Sbjct: 301 KINKIADEAFYGLDNLQV-LNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359
Query: 469 GMLSLIEVNFSNNLLTGPVPSFVPFQKSPNSSFFGNK 505
+ L ++ +N LT F+P P+ GNK
Sbjct: 360 FLEKLQTLDLRDNALT--TIHFIP--SIPDIFLSGNK 392
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRP 706
K+ RE+ + L H N+V+ + E L+ Y G + L H K+ + R
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
+ + + + H I+H D+ + N+LLDAD + + S
Sbjct: 119 KFRQ-------IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---G 168
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVE 812
+ A G+ Y PE + P +V+S GV+L +++ LP +
Sbjct: 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 109/289 (37%), Gaps = 53/289 (18%)
Query: 616 GTFSTVYKAVMPS-----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
GTF+ ++K V L + LK +D+ ++ +SKL H +LV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G D +L+ ++ G+L L ++ + W +L +A +A + FL +
Sbjct: 79 GVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL--W--KLEVAKQLAWAMHFLEENTL 134
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA--VAGSFGYIPPEYAYTMQV 788
IH ++ + N+LL + G KL DP + + ++PPE +
Sbjct: 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC-----I 189
Query: 789 TAPGNV------YSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDAR 842
P N+ +S+G L EI + G+ P LD++
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG------------------------GDKPLSALDSQ 225
Query: 843 LSTVSFGWRKEMLTALKVALL------CTDSTPAKRPKMKKVVEMLQEI 885
+ F + L A K A L C D P RP + ++ L +
Sbjct: 226 -RKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 118
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 179 VGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 616 GTFSTVYKAVMPS-GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G + VY V L ++VK LK + + ++E + ++ H NLV+ +G
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEV----EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
E ++ Y+P G L L E ++ L +A ++ + +L IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNRE---EVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNV 794
+++ N L+ + + + +S+L+ TA A P AY + +V
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKSDV 214
Query: 795 YSYGVVLLEILT 806
+++GV+L EI T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 46/211 (21%)
Query: 596 AIDLDAVVKATMKDSNMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRT-IIHHQNKMIRE 654
++DLD +K +I G + VYK + + +VK +R I+ +N
Sbjct: 9 SLDLD-----NLKLLELIGRGRYGAVYKGSLDERPV-AVKVFSFANRQNFINEKN----- 57
Query: 655 LEKLSKLCHDNLVRPIGFVIYEDVA--------LLLHNYLPNGTLAQLLHESTKQPDYRP 706
+ ++ + HDN+ R F++ ++ LL+ Y PNG+L + L T
Sbjct: 58 IYRVPLMEHDNIAR---FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------ 108
Query: 707 DWPTRLSIAIGVAEGLAFLH-------HV--AIIHLDISSGNVLLDADFKPLLGEIEIS- 756
DW + +A V GLA+LH H AI H D++S NVL+ D ++ + +S
Sbjct: 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
Query: 757 -----KLLDP-SKGTASISAVAGSFGYIPPE 781
+L+ P + A+IS V G+ Y+ PE
Sbjct: 169 RLTGNRLVRPGEEDNAAISEV-GTIRYMAPE 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKW 824
E + A P +V+S G+VL +L LP ++ + W
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 627 PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF--VIYEDVAL-LLH 683
PSGL+++ K + + I +N++IREL+ L + C+ + +GF Y D + +
Sbjct: 32 PSGLVMARKLIHLEIKPAI--RNQIIRELQVLHE-CNSPYI--VGFYGAFYSDGEISICM 86
Query: 684 NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV-AIIHLDISSGNVLL 742
++ G+L Q+L ++ + P+ ++I V +GL +L I+H D+ N+L+
Sbjct: 87 EHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 141
Query: 743 DADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEYAYTMQVTAPGNVYSYG 798
++ GEI KL D I +A F Y+ PE + +++S G
Sbjct: 142 NSR-----GEI---KLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMG 193
Query: 799 VVLLEILTTRLP 810
+ L+E+ R P
Sbjct: 194 LSLVEMAVGRYP 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 114
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRP 706
K+ RE+ + L H N+V+ + E L+ Y G + L H K+ + R
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
+ + + + H I+H D+ + N+LLDAD + + S
Sbjct: 116 KFRQ-------IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---G 165
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVE 812
+ GS Y PE + P +V+S GV+L +++ LP +
Sbjct: 166 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG 717
LS + H ++R G ++ +Y+ G L LL +S + P+ P A
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN-----PVAKFYAAE 114
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
V L +LH II+ D+ N+LLD + G I+I+ + G+ Y
Sbjct: 115 VCLALEYLHSKDIIYRDLKPENILLDKN-----GHIKITDFGFAKYVPDVTYXLCGTPDY 169
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
I PE T + +S+G+++ E+L P
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 653 RELEKLSKLCHDNLVRPIGFV--IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPT 710
RE+E L L H+++V+ G E L+ Y+P G+L L P +
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQ 112
Query: 711 RLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA 770
L A + EG+A+LH IH +++ NVLLD D +G+ ++K + +
Sbjct: 113 LLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 771 VAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
S F Y PE + +V+S+GV L E+LT
Sbjct: 173 DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 653 RELEKLSKLCHDNLVRPIGFV--IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPT 710
RE+E L L H+++V+ G E L+ Y+P G+L L P +
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQ 113
Query: 711 RLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA 770
L A + EG+A+LH IH +++ NVLLD D +G+ ++K + +
Sbjct: 114 LLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 771 VAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
S F Y PE + +V+S+GV L E+LT
Sbjct: 174 DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 123
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 124 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 179
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 180 LARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
Query: 812 EED 814
D
Sbjct: 239 YPD 241
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 76 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 195 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 116
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 122 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 177
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 178 LARDMY-DKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 236
Query: 812 EED 814
D
Sbjct: 237 YPD 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 122 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 181
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 182 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 237
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 238 LARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296
Query: 812 EED 814
D
Sbjct: 297 YPD 299
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 661 LCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAE 720
L H+N+V+ G ++ L Y G L + P+ P +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-----PDAQRFFHQLMA 115
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
G+ +LH + I H DI N+LLD + + ++ + + ++ + G+ Y+ P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 781 EYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEE 813
E + A P +V+S G+VL +L LP ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 68 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 127
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 128 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 183
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 184 LARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 242
Query: 812 EED 814
D
Sbjct: 243 YPD 245
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 123 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 179 LARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 812 EED 814
D
Sbjct: 238 YPD 240
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 607 MKDSNMIYCGTFSTVYKA-VMPSGLIL--SVKRLKSMDRTIIHHQNKMIRELEKLSKLCH 663
+K ++I G F V KA + GL + ++KR+K H ELE L KL H
Sbjct: 24 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD--FAGELEVLCKLGH 81
Query: 664 D-NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHEST---KQPDYRPDWPTR-------- 711
N++ +G + L Y P+G L L +S P + T
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
L A VA G+ +L IH ++++ N+ L+GE ++K+ D V
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNI--------LVGENYVAKIADFGLSRGQEVYV 193
Query: 772 AGSFGYIPPEYA------YTMQVTAPGNVYSYGVVLLEILT 806
+ G +P + Y++ T +V+SYGV+L EI++
Sbjct: 194 KKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVS 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 637 LKSMDRTIIHHQN--KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQL 694
+K +D+T ++ + K+ RE+ + L H N+V+ + E L+ Y G +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 695 L--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGE 752
L H K+ + R + + + + H I+H D+ + N+LLDAD + +
Sbjct: 104 LVAHGRMKEKEARAKFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 753 IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
S + A G+ Y PE + P +V+S GV+L +++ LP
Sbjct: 157 FGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 812 E 812
+
Sbjct: 214 D 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 198 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 123 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 179 LARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 812 EED 814
D
Sbjct: 238 YPD 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ FL +H D+++ N +LD F + +
Sbjct: 121 IRNETHNPTVK----DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 177 LARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
Query: 812 EED 814
D
Sbjct: 236 YPD 238
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 198 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 36/182 (19%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
S + VA+G+AFL IH D+++ N+LL + + +++ +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVEEDF----GEGVDLV 822
++ PE + T +V+SYG+ L E+ + +PV+ F EG ++
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEML 882
H APA EM +K C D+ P KRP K++V+++
Sbjct: 292 SPEH-APA----------------------EMYDIMKT---CWDADPLKRPTFKQIVQLI 325
Query: 883 QE 884
++
Sbjct: 326 EK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 36/182 (19%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
S + VA+G+AFL IH D+++ N+LL + + +++ +
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVEEDF----GEGVDLV 822
++ PE + T +V+SYG+ L E+ + +PV+ F EG ++
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 284
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEML 882
H APA EM +K C D+ P KRP K++V+++
Sbjct: 285 SPEH-APA----------------------EMYDIMKT---CWDADPLKRPTFKQIVQLI 318
Query: 883 QE 884
++
Sbjct: 319 EK 320
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 36/182 (19%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
S + VA+G+AFL IH D+++ N+LL + + +++ +
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVEEDF----GEGVDLV 822
++ PE + T +V+SYG+ L E+ + +PV+ F EG ++
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEML 882
H APA EM +K C D+ P KRP K++V+++
Sbjct: 269 SPEH-APA----------------------EMYDIMKT---CWDADPLKRPTFKQIVQLI 302
Query: 883 QE 884
++
Sbjct: 303 EK 304
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 81 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 140
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 141 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 196
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 197 LARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 255
Query: 812 EED 814
D
Sbjct: 256 YPD 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S L +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 83
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 84 -VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 138
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 195
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S L +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 49 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 106
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 107 -VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 161
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 218
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 55 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 114
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 115 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 170
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 171 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 229
Query: 812 EED 814
D
Sbjct: 230 YPD 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 36/182 (19%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
S + VA+G+AFL IH D+++ N+LL + + +++ +
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVEEDF----GEGVDLV 822
++ PE + T +V+SYG+ L E+ + +PV+ F EG ++
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 286
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEML 882
H APA EM +K C D+ P KRP K++V+++
Sbjct: 287 SPEH-APA----------------------EMYDIMKT---CWDADPLKRPTFKQIVQLI 320
Query: 883 QE 884
++
Sbjct: 321 EK 322
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S L +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 24 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 81
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 82 -VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 136
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 193
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 43/272 (15%)
Query: 632 LSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGT 690
++VK LKS D T + +I E+E + + H N++ +G + ++ Y G
Sbjct: 104 VAVKMLKS-DATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 691 LAQLLH-------ESTKQPDYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGN 739
L + L E + P + P+ +S A VA G+ +L IH D+++ N
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 221
Query: 740 VLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGV 799
VL+ D + + +++ + + ++ PE + T +V+S+GV
Sbjct: 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 281
Query: 800 VLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKE 853
+L EI T +PVEE F L+K H R + P + E
Sbjct: 282 LLWEIFTLGGSPYPGVPVEELF----KLLKEGH----RMDKPSNCTN------------E 321
Query: 854 MLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
+ ++ C + P++RP K++VE L I
Sbjct: 322 LYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S L +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 18 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 75
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 76 -VITENPVWIIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 187
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S L +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 21 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 78
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 79 -VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 190
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISK-LLDPSKGTASISAVAGSFG 776
+A GL LH + II+ D+ N+LLD + L + +SK +D K S G+
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF---CGTVE 195
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPE 836
Y+ PE + + +SYGV++ E+LT LP +G D R ET
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF-----QGKD----------RKETMT 240
Query: 837 QILDARLSTVSF 848
IL A+L F
Sbjct: 241 LILKAKLGMPQF 252
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 637 LKSMDRTIIHHQN--KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQL 694
+K +D+T ++ + K+ RE+ + L H N+V+ + E L+ Y G +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 695 L--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGE 752
L H K+ + R + + + + H I+H D+ + N+LLDAD + +
Sbjct: 104 LVAHGRMKEKEARAKFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 753 IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
S + GS Y PE + P +V+S GV+L +++ LP
Sbjct: 157 FGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 812 E 812
+
Sbjct: 214 D 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S L +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 23 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 80
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 81 -VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 135
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 192
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 632 LSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTL 691
+++ R+ S +R + RE+ L+ + H N+V+ ++ +Y G L
Sbjct: 57 INISRMSSKER------EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL 110
Query: 692 AQLLHESTK---QPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP 748
+ ++ Q D DW ++ +A L +H I+H DI S N+ L D
Sbjct: 111 FKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRKILHRDIKSQNIFLTKDGTV 164
Query: 749 LLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTR 808
LG+ I+++L+ + A A G+ Y+ PE ++++ G VL E+ T +
Sbjct: 165 QLGDFGIARVLNSTVELA--RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
Query: 809 LPVE 812
E
Sbjct: 223 HAFE 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 637 LKSMDRTIIHHQN--KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQL 694
+K +D+T ++ + K+ RE+ + L H N+V+ + E L+ Y G +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 695 L--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGE 752
L H K+ + R + + + + H I+H D+ + N+LLDAD + +
Sbjct: 104 LVAHGRMKEKEARAKFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 753 IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
S + GS Y PE + P +V+S GV+L +++ LP
Sbjct: 157 FGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 812 E 812
+
Sbjct: 214 D 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 82 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 141
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 142 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 197
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 198 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 256
Query: 812 EED 814
D
Sbjct: 257 YPD 259
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 36/182 (19%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
S + VA+G+AFL IH D+++ N+LL + + +++ +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVEEDF----GEGVDLV 822
++ PE + T +V+SYG+ L E+ + +PV+ F EG ++
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 823 KWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEML 882
H APA EM +K C D+ P KRP K++V+++
Sbjct: 292 SPEH-APA----------------------EMYDIMKT---CWDADPLKRPTFKQIVQLI 325
Query: 883 QE 884
++
Sbjct: 326 EK 327
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 121 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 177 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
Query: 812 EED 814
D
Sbjct: 236 YPD 238
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 123 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 179 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 812 EED 814
D
Sbjct: 238 YPD 240
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 60 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 119
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 120 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 175
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 176 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 234
Query: 812 EED 814
D
Sbjct: 235 YPD 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV--RPIGFVIYEDVALLLHNY 685
+G +++VK+L+ + Q RE++ L L D +V R + + L+ Y
Sbjct: 39 TGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 95
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDAD 745
LP+G L L R D L + + +G+ +L +H D+++ N+L++++
Sbjct: 96 LPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE 151
Query: 746 FKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLE 803
+ + ++KLL K + S F Y P + + + +V+S+GVVL E
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYE 210
Query: 804 ILT 806
+ T
Sbjct: 211 LFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV--RPIGFVIYEDVALLLHNY 685
+G +++VK+L+ + Q RE++ L L D +V R + + L+ Y
Sbjct: 51 TGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDAD 745
LP+G L L R D L + + +G+ +L +H D+++ N+L++++
Sbjct: 108 LPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE 163
Query: 746 FKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLE 803
+ + ++KLL K + S F Y P + + + +V+S+GVVL E
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYE 222
Query: 804 ILT 806
+ T
Sbjct: 223 LFT 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 78 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 197 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 658 LSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG 717
+ + H N+V G V +++ ++ NG L L + Q + + G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV----IQLVGMLRG 153
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL-DPSKGTASISAVAGSFG 776
+A G+ +L + +H D+++ N+L++++ + + +S+++ D + + +
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWV---HGAPARGE 833
+ PE + T+ +V+SYG+V+ E+++ D D++K + + PA +
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLPAPMD 272
Query: 834 TPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEIKQN 888
P + L W+KE A+RPK +++V +L ++ +N
Sbjct: 273 CPAGLHQLMLDC----WQKER---------------AERPKFEQIVGILDKMIRN 308
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV--RPIGFVIYEDVALLLHNY 685
+G +++VK+L+ + Q RE++ L L D +V R + + L+ Y
Sbjct: 38 TGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 94
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDAD 745
LP+G L L R D L + + +G+ +L +H D+++ N+L++++
Sbjct: 95 LPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE 150
Query: 746 FKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLE 803
+ + ++KLL K + S F Y P + + + +V+S+GVVL E
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYE 209
Query: 804 ILT 806
+ T
Sbjct: 210 LFT 212
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 122 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 177
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 178 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 236
Query: 812 EED 814
D
Sbjct: 237 YPD 239
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 30 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 86
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 145 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR----W 200
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 123 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 179 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 812 EED 814
D
Sbjct: 238 YPD 240
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 637 LKSMDR-TIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY-EDVALLLHNYLPNGTLAQL 694
+KS++R T I ++ + E + H N++ +G + E L++ Y+ +G L
Sbjct: 58 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 117
Query: 695 LHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ T P + + + VA+G+ +L +H D+++ N +LD F + +
Sbjct: 118 IRNETHNPTVK----DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG 173
Query: 755 ISKLLDPSKGTASISAVAGS---FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV 811
+++ + K S+ G+ ++ E T + T +V+S+GV+L E++T P
Sbjct: 174 LARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232
Query: 812 EED 814
D
Sbjct: 233 YPD 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S + +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 78
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L Y D + + A ++ LA+L +
Sbjct: 79 -VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 190
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRP 706
K+ RE+ + L H N+V+ + E L+ Y G + L H K+ + R
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
+ + + + H I+H D+ + N+LLDAD + + S
Sbjct: 118 KFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--- 167
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVE 812
+ GS Y PE + P +V+S GV+L +++ LP +
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 37/274 (13%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F VYKA +G + + K +++ + I E+E L+ H +V+ +G
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
++ ++ + P G + ++ E D P + + E L FLH IIH D
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS---AVAGSFGYIPPEYAY--TMQVT 789
+ +GNVL+ L G+I ++ +K ++ + G+ ++ PE TM+ T
Sbjct: 135 LKAGNVLMT-----LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 790 A---PGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTV 846
+++S G+ L+E+ P E V L+K P TP +
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSDPPTLLTPSK--------- 239
Query: 847 SFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVE 880
W E LK+AL D P RP +++E
Sbjct: 240 ---WSVEFRDFLKIAL---DKNPETRPSAAQLLE 267
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 21 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 77
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 136 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR----W 191
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 198 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 198 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 37/274 (13%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G F VYKA +G + + K +++ + I E+E L+ H +V+ +G
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
++ ++ + P G + ++ E D P + + E L FLH IIH D
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS---AVAGSFGYIPPEYAY--TMQVT 789
+ +GNVL+ L G+I ++ +K ++ + G+ ++ PE TM+ T
Sbjct: 143 LKAGNVLMT-----LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 790 A---PGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTV 846
+++S G+ L+E+ P E V L+K P TP +
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSDPPTLLTPSK--------- 247
Query: 847 SFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVE 880
W E LK+AL D P RP +++E
Sbjct: 248 ---WSVEFRDFLKIAL---DKNPETRPSAAQLLE 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 109
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 110 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 169
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 170 VGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 47 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 102
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 103 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 162
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 163 VGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 103
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 104 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 164 VGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 43 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 98
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 99 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 159 VGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 637 LKSMDRTIIHHQN--KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQL 694
+K +D+T ++ + K+ RE+ L H N+V+ + E L+ Y G +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDY 103
Query: 695 L--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGE 752
L H K+ + R + + + + H I+H D+ + N+LLDAD + +
Sbjct: 104 LVAHGRXKEKEARAKFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIAD 156
Query: 753 IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
S + A G+ Y PE + P +V+S GV+L +++ LP
Sbjct: 157 FGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 812 E 812
+
Sbjct: 214 D 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
SI + E ++FLH I+H D+ N+LLD + + L + S L+P + + +
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELC 260
Query: 773 GSFGYIPPE-YAYTMQVTAPG-----NVYSYGVVLLEILTTRLP 810
G+ GY+ PE +M T PG ++++ GV+L +L P
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVI--YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDW 708
++ E+ L +L H N+VR +I ++ Y G LA ++ + TK+ Y +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 709 -----PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSK 763
T+L++A+ + H ++H D+ NV LD LG+ ++++L+
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILN--H 168
Query: 764 GTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEI 804
T+ A G+ Y+ PE M +++S G +L E+
Sbjct: 169 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRP 706
K+ RE+ + L H N+V+ + E L+ Y G + L H K+ + R
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
+ + + + H I+H D+ + N+LLDAD + + S
Sbjct: 118 KFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--- 167
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVE 812
+ GS Y PE + P +V+S GV+L +++ LP +
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 637 LKSMDRTIIHHQN--KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQL 694
+K +D+T ++ + K+ RE+ + L H N+V+ + E L+ Y G +
Sbjct: 37 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 96
Query: 695 L--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGE 752
L H K+ + R + + + + H I+H D+ + N+LLDAD + +
Sbjct: 97 LVAHGWMKEKEARAKFRQ-------IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 149
Query: 753 IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
S + GS Y PE + P +V+S GV+L +++ LP
Sbjct: 150 FGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
Query: 812 E 812
+
Sbjct: 207 D 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E + P
Sbjct: 72 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 131
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 251
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 252 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 288
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 289 PTFKQLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E + P
Sbjct: 69 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 128
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 248
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 249 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 285
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 286 PTFKQLVEDLDRI 298
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 633 SVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLA 692
++KR++ +R + + K++RE++ L+KL H +VR + ++ L P L
Sbjct: 34 AIKRIRLPNRELA--REKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY 91
Query: 693 QLLHESTKQPDYRPDW------------PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNV 740
+ K+ DW L I + +AE + FLH ++H D+ N+
Sbjct: 92 IQMQLCRKE--NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNI 149
Query: 741 LLDADFKPLLGEI----------EISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
D +G+ E +L P A + G+ Y+ PE + +
Sbjct: 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH 209
Query: 791 PGNVYSYGVVLLEIL 805
+++S G++L E+L
Sbjct: 210 KVDIFSLGLILFELL 224
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNP 139
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 260 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 296
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 297 PTFKQLVEDLDRI 309
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 139
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 260 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 296
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 297 PTFKQLVEDLDRI 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNP 139
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 260 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 296
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 297 PTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E + P
Sbjct: 73 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 132
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 252
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 253 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 289
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 290 PTFKQLVEDLDRI 302
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAVM--PSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 81
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + T A+ VAEG+ +L
Sbjct: 82 GVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLL----GTLSRYAVQVAEGMGYLESKRF 136
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 196
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 197 HASDTWMFGVTLWEMFT 213
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 33/213 (15%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F VYKA +L+ ++ +D + E++ L+ H N+V+ + Y
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLD 734
E+ +L + G + ++ E RP +++ + + L +LH IIH D
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI---SAVAGSFGYIPPE---------- 781
+ +GN+L D G+I+++ +K T +I + G+ ++ PE
Sbjct: 161 LKAGNILFTLD-----GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 782 -YAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
Y Y +V+S G+ L+E+ P E
Sbjct: 216 PYDYK------ADVWSLGITLIEMAEIEPPHHE 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAVAGSFGY 777
GL FLH I++ D+ N+LLD D G I+I+ + G A + G+ Y
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKD-----GHIKIADFGMCKENMLGDAKTNEFCGTPDY 185
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
I PE + + +S+GV+L E+L + P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S + +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 78
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L + D + + A ++ LA+L +
Sbjct: 79 -VITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H DI++ NVL+ ++ LG+ +S+ ++ S + S ++ PE + T+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA-SKGKLPIKWMAPESINFRRFTSA 192
Query: 792 GNVYSYGVVLLEIL 805
+V+ +GV + EIL
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 715 AIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAV 771
A + GL FLH I++ D+ N+LLD D G I+I+ + G A +
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNILLDKD-----GHIKIADFGMCKENMLGDAKTNXF 178
Query: 772 AGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
G+ YI PE + + +S+GV+L E+L + P
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E P
Sbjct: 65 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 124
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 244
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 245 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 281
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 282 PTFKQLVEDLDRI 294
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFG 776
+A L LH + II+ D+ N+LLD + L + +SK +D K S G+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 191
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPE 836
Y+ PE T + +S+GV++ E+LT LP +G D R ET
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-----QGKD----------RKETMT 236
Query: 837 QILDARLSTVSF 848
IL A+L F
Sbjct: 237 MILKAKLGMPQF 248
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFG 776
+A L LH + II+ D+ N+LLD + L + +SK +D K S G+
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 192
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPE 836
Y+ PE T + +S+GV++ E+LT LP +G D R ET
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-----QGKD----------RKETMT 237
Query: 837 QILDARLSTVSF 848
IL A+L F
Sbjct: 238 MILKAKLGMPQF 249
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 222 IPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLT 281
+P I AS + + L NR++ C++L+ + + +N L G+ A +GLT
Sbjct: 25 VPTGIPASS--QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAF---TGLT 79
Query: 282 YFE----ADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENS 337
E +DN L F +L L+L G + P L LQ L L +N+
Sbjct: 80 LLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNN 139
Query: 338 LFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNC 397
L + NL L L NR +A + L LLL QN + PH +
Sbjct: 140 LQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDL 199
Query: 398 MKLLQLHIGSNYLTGSIPPEI-GHIRNLQ 425
+L+ L++ +N L+ +P E+ +R+LQ
Sbjct: 200 GRLMTLYLFANNLS-MLPAEVLVPLRSLQ 227
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Query: 86 KALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLN-KFGGVIPRELGSLKDLRFFNISNN 144
+ L L L +NA +G +AF L+ LE LDLS N + V P L L ++
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 145 VLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGS 204
L P + L L+ + N L +L NL + N++
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRG 174
Query: 205 VSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNN 264
+ L+ L LH N + P + G+L L L N L+ E++ +SL +R+ +N
Sbjct: 175 LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Query: 265 DLV 267
V
Sbjct: 235 PWV 237
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 71/185 (38%), Gaps = 7/185 (3%)
Query: 204 SVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQN-RLTGDIPEL---VGHCKSLSNI 259
S L +L LHSN L G + LE L L+ N +L P +GH +L
Sbjct: 53 SCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLD 112
Query: 260 RIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIP 319
R G +L P ++ L Y +NNL F NLT L L N V
Sbjct: 113 RCGLQELG---PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 320 PELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYL 379
L +L L+L++N + P + L L L N + + + LQYL
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYL 229
Query: 380 LLGQN 384
L N
Sbjct: 230 RLNDN 234
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 5/203 (2%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
+R+ L N S ++F + L L L N G+ L L ++S+N +
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 149 EI-PDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDN-LGSVS 206
+ P + L L + L P L L+ +N L +PDN +
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQA-LPDNTFRDLG 152
Query: 207 ELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNND 265
L L LH N++ +P+ F L+ L+L QN + P L + + N+
Sbjct: 153 NLTHLFLHGNRIPS-VPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANN 211
Query: 266 LVGVIPRAIGNVSGLTYFEADNN 288
L + + + L Y ++N
Sbjct: 212 LSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 23 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 79
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 138 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 193
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP 779
+GL +LH I+H DI GN+LL + + +++ L P + GS + P
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 780 PEYAYTMQVTA--PGNVYSYGVVLLEILTTRLPVEED 814
PE A + + +++S GV L I T P E D
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S + +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 458
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L + D + + A ++ LA+L +
Sbjct: 459 -VITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKRFV 513
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ A LG+ +S+ ++ S A G ++ PE + T
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 570
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S + +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 78
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L + D + + A ++ LA+L +
Sbjct: 79 -VITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ A LG+ +S+ ++ S A G ++ PE + T
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 190
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + R +
Sbjct: 28 GAFGTVYKGIWIPDGENVKIPVAIKVLR--ENTSPKANKEILDEAYVMAGVGSPYVSRLL 85
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G + V L+ +P G L + E+ + + L+ + +A+G+++L V +
Sbjct: 86 GICLTSTVQLVTQ-LMPYGCLLDHVRENRGRLGSQ----DLLNWCMQIAKGMSYLEDVRL 140
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
+H D+++ NVL+ + + + +++LLD + ++ E + T
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 791 PGNVYSYGVVLLEILT 806
+V+SYGV + E++T
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 56/264 (21%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---------- 700
++ E L ++ H ++++ G + LL+ Y G+L L ES K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 701 --------QPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLG 751
PD R +S A +++G+ +L ++++H D+++ N+L+ K +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKIS 192
Query: 752 EIEISKLLDPSKGTASISAVAGSFGYIPPEYA-----YTMQVTAPGNVYSYGVVLLEILT 806
+ +S+ + S V S G IP ++ + T +V+S+GV+L EI+T
Sbjct: 193 DFGLSRDV-----YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 807 TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM-----LTALKVA 861
+ G P G PE++ + + G R E ++
Sbjct: 248 ------------------LGGNPYPGIPPERLFN----LLKTGHRMERPDNCSEEMYRLM 285
Query: 862 LLCTDSTPAKRPKMKKVVEMLQEI 885
L C P KRP + + L+++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 13/167 (7%)
Query: 649 NKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRP 706
K+ RE+ + L H N+V+ + E L+ Y G + L H K+ + R
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
+ + + + H I+H D+ + N+LLD D + + S
Sbjct: 119 KFRQ-------IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN--- 168
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVE 812
+ GS Y PE + P +V+S GV+L +++ LP +
Sbjct: 169 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 30 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 86
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 145 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 200
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 27 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 83
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 142 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 197
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPI 670
I G F +V+K V G I ++KR K + QN + RE+ + L H ++VR
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL-REVYAHAVLGQHSHVVRYF 77
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+D L+ + Y G+LA + E+ + Y + + + + V GL ++H +++
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGLRYIHSMSL 136
Query: 731 IHLDISSGNVLL 742
+H+DI N+ +
Sbjct: 137 VHMDIKPSNIFI 148
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 29 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 85
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 144 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 199
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 41/253 (16%)
Query: 651 MIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH-------ESTKQP 702
+I E+E + + H N++ +G + ++ Y G L + L E P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 139
Query: 703 DYRPDWPTR----LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL 758
+ P+ +S A VA G+ +L IH D+++ NVL+ D + + +++
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 759 LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT------TRLPVE 812
+ + ++ PE + T +V+S+GV+L EI T +PVE
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKR 872
E F L+K H R + P + E+ ++ C + P++R
Sbjct: 260 ELF----KLLKEGH----RMDKPSNCTN------------ELYMMMRD---CWHAVPSQR 296
Query: 873 PKMKKVVEMLQEI 885
P K++VE L I
Sbjct: 297 PTFKQLVEDLDRI 309
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVIYEDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWP 709
+ E +++L H NLV+ +G ++ E L ++ Y+ G+L L +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGD 117
Query: 710 TRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS 769
L ++ V E + +L +H D+++ NVL+ D + + ++K ++ T +
Sbjct: 118 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177
Query: 770 AVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
+ PE + + +V+S+G++L EI + R+P
Sbjct: 178 V-----KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 42/233 (18%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F V+KA + + + +VK D+ + RE+ + H+NL++ F+
Sbjct: 26 GRFGCVWKAQLMNDFV-AVKIFPLQDKQSWQSE----REIFSTPGMKHENLLQ---FIAA 77
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRP----DWPTRLSIAIGVAEGLAFLHH---- 727
E L L L H+ DY W +A ++ GL++LH
Sbjct: 78 EKRGSNLEVEL---WLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 728 -------VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
+I H D S NVLL +D +L + ++ +P K G+ Y+ P
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 781 EY---AYTMQVTA--PGNVYSYGVVLLEILTT-----------RLPVEEDFGE 817
E A Q A ++Y+ G+VL E+++ LP EE+ G+
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQ 247
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 616 GTFSTVYKAVMPS----GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
G F V++ + S + +++K K+ + + K ++E + + H ++V+ IG
Sbjct: 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIG 458
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
VI E+ ++ G L L + D + + A ++ LA+L +
Sbjct: 459 -VITENPVWIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKRFV 513
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF--GYIPPEYAYTMQVT 789
H DI++ NVL+ ++ LG+ +S+ ++ S A G ++ PE + T
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPESINFRRFT 570
Query: 790 APGNVYSYGVVLLEIL 805
+ +V+ +GV + EIL
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPI 670
I G F +V+K V G I ++KR K + QN + RE+ + L H ++VR
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL-REVYAHAVLGQHSHVVRYF 75
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+D L+ + Y G+LA + E+ + Y + + + + V GL ++H +++
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGLRYIHSMSL 134
Query: 731 IHLDISSGNVLL 742
+H+DI N+ +
Sbjct: 135 VHMDIKPSNIFI 146
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F VYKA +L+ ++ +D + E++ L+ H N+V+ + Y
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG-VAEGLAFLHHVAIIHLD 734
E+ +L + G + ++ E RP +++ + + L +LH IIH D
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI---SAVAGSFGYIPPEY-----AYTM 786
+ +GN+L D G+I+++ +K T I + G+ ++ PE +
Sbjct: 161 LKAGNILFTLD-----GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 787 QVTAPGNVYSYGVVLLEILTTRLPVEE 813
+V+S G+ L+E+ P E
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHE 242
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV--RPIGFVIYEDVALLLHNY 685
+G +++VK+L+ + Q RE++ L L D +V R + + L+ Y
Sbjct: 35 TGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEY 91
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDAD 745
LP+G L L R D L + + +G+ +L +H D+++ N+L++++
Sbjct: 92 LPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE 147
Query: 746 FKPLLGEIEISKLLDPSKGTASISAVAGS--FGYIPPEYAYTMQVTAPGNVYSYGVVLLE 803
+ + ++KLL K + S F Y P + + + +V+S+GVVL E
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYE 206
Query: 804 ILT 806
+ T
Sbjct: 207 LFT 209
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 29 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 85
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 144 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 199
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 153/395 (38%), Gaps = 55/395 (13%)
Query: 110 SELEFLDLSLNKFGGVIPRELGSLKDLRFFN---------ISNNVLVGEIPDELKSLEKL 160
+ + ++DLSLN + L+DL+F I NN G + L+
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 161 EDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEI--PDNLGSVSELELLNLHSNQL 218
+ Q+ + NG L NL V T + L G + + ++ LE+L L N +
Sbjct: 90 QFLQLETGAFNG--------LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141
Query: 219 EGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIG-- 275
+ P S F + + VL LT N++ I DL+ +
Sbjct: 142 KKIQPASFFLNMRRFHVLDLTFNKVKS----------------ICEEDLLNFQGKHFTLL 185
Query: 276 NVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLI---NLQELI 332
+S +T + + L E + +++T L+L+ NGF + I +Q LI
Sbjct: 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245
Query: 333 LYEN----SLFGEI----PKSI----LACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLL 380
L + S FG P + L + DLS ++ + + + L+ L
Sbjct: 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLT 305
Query: 381 LGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLP 440
L QN + + LL+L++ N+L GSI + + L+LS+NH+
Sbjct: 306 LAQNEINKIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGD 364
Query: 441 PELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIE 475
L L + NQL ++P + L+ ++
Sbjct: 365 QSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQ 398
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 84 ELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISN 143
E +K DLS + + S F + ++LE L L+ N+ + L L N+S
Sbjct: 273 EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQ 332
Query: 144 NVLVGEIPDEL-KSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNL 202
N L G I + ++L+KLE +S N + L NL+ NQL +PD +
Sbjct: 333 NFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL-KSVPDGI 390
Query: 203 -GSVSELELLNLHSNQLEGPIPK 224
++ L+ + LH+N + P+
Sbjct: 391 FDRLTSLQKIWLHTNPWDCSCPR 413
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPI 670
I G F +V+K V G I ++KR K + QN + RE+ + L H ++VR
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL-REVYAHAVLGQHSHVVRYF 75
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+D L+ + Y G+LA + E+ + Y + + + + V GL ++H +++
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGLRYIHSMSL 134
Query: 731 IHLDISSGNVLL 742
+H+DI N+ +
Sbjct: 135 VHMDIKPSNIFI 146
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFG 776
+A L LH + II+ D+ N+LLD + L + +SK +D K S G+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 191
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPE 836
Y+ PE T + +S+GV++ E+LT LP +G D R ET
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-----QGKD----------RKETMT 236
Query: 837 QILDARLSTVSF 848
IL A+L F
Sbjct: 237 MILKAKLGMPQF 248
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAV--MPSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + Q + +R A+ VAEG+ +L
Sbjct: 88 GVVLTPPMKMVTE-LAPLGSLLDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLESKRF 142
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS 202
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 203 HASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAV--MPSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + Q + +R A+ VAEG+ +L
Sbjct: 78 GVVLTPPMKMVTE-LAPLGSLLDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLESKRF 132
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS 192
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 193 HASDTWMFGVTLWEMFT 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 654 ELEKLSKLCHDNLVRPIGFVIYEDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRL 712
E +++L H NLV+ +G ++ E L ++ Y+ G+L L S + D L
Sbjct: 49 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRSVLGGD--CLL 105
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
++ V E + +L +H D+++ NVL+ D + + ++K ++ T +
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-- 163
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
+ PE + + +V+S+G++L EI + R+P
Sbjct: 164 ---KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 58 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 114
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 173 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 228
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A S I+++K L +++ + HQ + RE+E + L H N++R +
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ--LRREIEIQAHLHHPNILRLYNY 91
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ Y P G L + L +S + R +I +A+ L + H +IH
Sbjct: 92 FYDRRRIYLILEYAPRGELYKELQKSCTFDEQRT-----ATIMEELADALMYCHGKKVIH 146
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
DI N+LL + + + S + PS ++ G+ Y+PPE
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTM---CGTLDYLPPEMIEGRMHNEKV 202
Query: 793 NVYSYGVVLLEILTTRLPVE 812
+++ GV+ E+L P E
Sbjct: 203 DLWCIGVLCYELLVGNPPFE 222
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 57 DCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLD 116
D + LDLS LQ+ + + L RL L+ N+ + +P+ NLS L LD
Sbjct: 218 DSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLD 276
Query: 117 LSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
LS N+ +P ELGS L++F +N +V +P E +L L+ V N L
Sbjct: 277 LSHNRLTS-LPAELGSCFQLKYFYFFDN-MVTTLPWEFGNLCNLQFLGVEGNPL 328
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 36/125 (28%)
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
SNL + N+++N F L L L NSL E+P I NL LDLS+NR
Sbjct: 232 SNLQIFNISANIFKYDF---------LTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNR 281
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHI 421
+P E+G+C +L + N +T ++P E G++
Sbjct: 282 LTS-------------------------LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNL 315
Query: 422 RNLQI 426
NLQ
Sbjct: 316 CNLQF 320
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 252 HCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLAS 311
H LSN++I N I I LT + N+L+ E+ E SNL +L+L+
Sbjct: 227 HALDLSNLQIFN------ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279
Query: 312 NGFTGVIPPELGQLINLQELILYEN 336
N T +P ELG L+ ++N
Sbjct: 280 NRLTS-LPAELGSCFQLKYFYFFDN 303
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYEN 192
L +L+ FNIS N+ + L ++ N L +P + NL+NLRV N
Sbjct: 231 LSNLQIFNISANIFKYDF---------LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHN 280
Query: 193 QLVGEIPDNLGSVSELELLNLHSN 216
+L +P LGS +L+ N
Sbjct: 281 RLTS-LPAELGSCFQLKYFYFFDN 303
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPI 670
I G F +V+K V G I ++KR K + QN + RE+ + L H ++VR
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL-REVYAHAVLGQHSHVVRYF 73
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+D L+ + Y G+LA + E+ + Y + + + + V GL ++H +++
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVGRGLRYIHSMSL 132
Query: 731 IHLDISSGNVLL 742
+H+DI N+ +
Sbjct: 133 VHMDIKPSNIFI 144
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVL---LDADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V + + +LH + I+H D+ N+L LD D K ++ + +SK+ DP + +S G+
Sbjct: 125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGT 181
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
GY+ PE + + +S GV+ +L P ++
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 616 GTFSTVYKAVMPS--GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
G F VY+ V + G ++V + ++ K + E + L H ++V+ IG +
Sbjct: 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 82
Query: 674 IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHL 733
E +++ Y P G L L + T + ++ + + +A+L + +H
Sbjct: 83 EEEPTWIIMELY-PYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESINCVHR 137
Query: 734 DISSGNVLLDADFKPLLGEIEISKLL-DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
DI+ N+L+ + LG+ +S+ + D AS++ + ++ PE + T
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRRFTTAS 195
Query: 793 NVYSYGVVLLEILT 806
+V+ + V + EIL+
Sbjct: 196 DVWMFAVCMWEILS 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 106/264 (40%), Gaps = 56/264 (21%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---------- 700
++ E L ++ H ++++ G + LL+ Y G+L L ES K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 701 --------QPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLG 751
PD R +S A +++G+ +L + ++H D+++ N+L+ K +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 752 EIEISKLLDPSKGTASISAVAGSFGYIPPEYA-----YTMQVTAPGNVYSYGVVLLEILT 806
+ +S+ + S V S G IP ++ + T +V+S+GV+L EI+T
Sbjct: 193 DFGLSRDV-----YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 807 TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM-----LTALKVA 861
+ G P G PE++ + + G R E ++
Sbjct: 248 ------------------LGGNPYPGIPPERLFN----LLKTGHRMERPDNCSEEMYRLM 285
Query: 862 LLCTDSTPAKRPKMKKVVEMLQEI 885
L C P KRP + + L+++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G++ +VYKA+ +G I+++K++ + ++I+E+ + + ++V+ G
Sbjct: 40 GSYGSVYKAIHKETGQIVAIKQV-----PVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAI---GVAEGLAFLHHVAII 731
++ Y G+++ ++ K T IA +GL +LH + I
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTL-------TEDEIATILQSTLKGLEYLHFMRKI 147
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H DI +GN+LL+ + L + ++ L + A + V G+ ++ PE +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 792 GNVYSYGVVLLEILTTRLP 810
+++S G+ +E+ + P
Sbjct: 206 ADIWSLGITAIEMAEGKPP 224
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 616 GTFSTVYKAVMPS--GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
G F VY+ V + G ++V + ++ K + E + L H ++V+ IG +
Sbjct: 35 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 94
Query: 674 IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHL 733
E +++ Y P G L L + T + ++ + + +A+L + +H
Sbjct: 95 EEEPTWIIMELY-PYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESINCVHR 149
Query: 734 DISSGNVLLDADFKPLLGEIEISKLL-DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
DI+ N+L+ + LG+ +S+ + D AS++ + ++ PE + T
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRRFTTAS 207
Query: 793 NVYSYGVVLLEILT 806
+V+ + V + EIL+
Sbjct: 208 DVWMFAVCMWEILS 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVI--YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDW 708
++ E+ L +L H N+VR +I ++ Y G LA ++ + TK+ Y +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 709 -----PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSK 763
T+L++A+ + H ++H D+ NV LD LG+ ++++L+
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILN--H 168
Query: 764 GTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEI 804
T+ G+ Y+ PE M +++S G +L E+
Sbjct: 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 36 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 92
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 151 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 206
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 106/264 (40%), Gaps = 56/264 (21%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---------- 700
++ E L ++ H ++++ G + LL+ Y G+L L ES K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 701 --------QPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLG 751
PD R +S A +++G+ +L + ++H D+++ N+L+ K +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 752 EIEISKLLDPSKGTASISAVAGSFGYIPPEYA-----YTMQVTAPGNVYSYGVVLLEILT 806
+ +S+ + S V S G IP ++ + T +V+S+GV+L EI+T
Sbjct: 193 DFGLSRDV-----YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 807 TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEM-----LTALKVA 861
+ G P G PE++ + + G R E ++
Sbjct: 248 ------------------LGGNPYPGIPPERLFN----LLKTGHRMERPDNCSEEMYRLM 285
Query: 862 LLCTDSTPAKRPKMKKVVEMLQEI 885
L C P KRP + + L+++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAV--MPSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 81
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + Q + +R A+ VAEG+ +L
Sbjct: 82 GVVLTPPMKMVTE-LAPLGSLLDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLESKRF 136
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 196
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 197 HASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAV--MPSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + Q + +R A+ VAEG+ +L
Sbjct: 78 GVVLTPPMKMVTE-LAPLGSLLDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLESKRF 132
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 192
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 193 HASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAV--MPSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + Q + +R A+ VAEG+ +L
Sbjct: 88 GVVLTPPMKMVTE-LAPLGSLLDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLESKRF 142
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 202
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 203 HASDTWMFGVTLWEMFT 219
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 616 GTFSTVYKAVMPS--GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
G F VY+ V + G ++V + ++ K + E + L H ++V+ IG +
Sbjct: 19 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-I 77
Query: 674 IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHL 733
I E+ ++ P G L L + T + ++ + + +A+L + +H
Sbjct: 78 IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESINCVHR 133
Query: 734 DISSGNVLLDADFKPLLGEIEISKLL-DPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
DI+ N+L+ + LG+ +S+ + D AS++ + ++ PE + T
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRRFTTAS 191
Query: 793 NVYSYGVVLLEILT 806
+V+ + V + EIL+
Sbjct: 192 DVWMFAVCMWEILS 205
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 616 GTFSTVYKAV--MPSGLILSVKRLKSMDRTIIHHQNKM---IRELEKLSKLCHDNLVRPI 670
G+F V + PSG +SV +K + ++ M IRE+ + L H NL+R
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G V+ + ++ P G+L L + Q + +R A+ VAEG+ +L
Sbjct: 78 GVVLTPPMKMVTE-LAPLGSLLDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLESKRF 132
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG-SFGYIPPEYAYTMQVT 789
IH D+++ N+LL +G+ + + L + + F + PE T +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 192
Query: 790 APGNVYSYGVVLLEILT 806
+ + +GV L E+ T
Sbjct: 193 HASDTWMFGVTLWEMFT 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F VYKA +L+ ++ +D + E++ L+ H N+V+ + Y
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLD 734
E+ +L + G + ++ E RP +++ + + L +LH IIH D
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI---SAVAGSFGYIPPEY-----AYTM 786
+ +GN+L D G+I+++ +K T I G+ ++ PE +
Sbjct: 161 LKAGNILFTLD-----GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 787 QVTAPGNVYSYGVVLLEILTTRLPVEE 813
+V+S G+ L+E+ P E
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHE 242
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 80 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H ++++ N ++ DF +G+ +++ + + KG + V
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 199 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 43/212 (20%)
Query: 615 CGTFSTVYKAVM---PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
CG F +V + V + +++K LK T +M+RE + + +L + +VR IG
Sbjct: 20 CGNFGSVRQGVYRMRKKQIDVAIKVLKQ--GTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 672 FVIYEDVALL--------LHNYL-------PNGTLAQLLHESTKQPDYRPDWPTRLSIAI 716
E + L+ LH +L P +A+LLH+
Sbjct: 78 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ------------------- 118
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSKGTASISAVAGS 774
V+ G+ +L +H D+++ NVLL + + +SK L D S TA SA
Sbjct: 119 -VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR-SAGKWP 176
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE + ++ +V+SYGV + E L+
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 662 CHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP-----TRLSIAI 716
CH ++VR +G V L++ + +G L L + + P P + +A
Sbjct: 79 CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVA 772
+A+G+A+L+ +H ++++ N ++ DF +G+ +++ + + KG + V
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ PE T +++S+GVVL EI +
Sbjct: 198 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVIYEDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWP 709
+ E +++L H NLV+ +G ++ E L ++ Y+ G+L L S + D
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRSVLGGD-- 108
Query: 710 TRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS 769
L ++ V E + +L +H D+++ NVL+ D + + ++K ++ T +
Sbjct: 109 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 168
Query: 770 AVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
+ PE + +V+S+G++L EI + R+P
Sbjct: 169 V-----KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGT 765
P + + GL LH II+ D+ NVLLD D G + IS L ++ G
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-----GNVRISDLGLAVELKAGQ 343
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
AG+ G++ PE + + ++ GV L E++ R P
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGT 765
P + + GL LH II+ D+ NVLLD D G + IS L ++ G
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-----GNVRISDLGLAVELKAGQ 343
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
AG+ G++ PE + + ++ GV L E++ R P
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGT 765
P + + GL LH II+ D+ NVLLD D G + IS L ++ G
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-----GNVRISDLGLAVELKAGQ 343
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
AG+ G++ PE + + ++ GV L E++ R P
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 608 KDSNMIYC---GTFSTVYKAVMPS-GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCH 663
+D ++Y G++ K S G IL K L T Q ++ E+ L +L H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ-MLVSEVNLLRELKH 64
Query: 664 DNLVRPIGFVIYEDVALL--LHNYLPNGTLAQLLHESTKQPDYRPDW-----PTRLSIAI 716
N+VR +I L + Y G LA ++ + TK+ Y + T+L++A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG 776
+ H ++H D+ NV LD LG+ ++++L+ + A G+
Sbjct: 125 KECHRRSDGGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPY 181
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEI 804
Y+ PE M +++S G +L E+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGT 765
P + + GL LH II+ D+ NVLLD D G + IS L ++ G
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-----GNVRISDLGLAVELKAGQ 343
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
AG+ G++ PE + + ++ GV L E++ R P
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLK--SMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
GT++TVYK + +G+ +++K +K S + T + IRE+ + +L H+N+VR
Sbjct: 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGT----PSTAIREISLMKELKHENIVRLYDV 71
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP--DWPTRLSIAI------GVAEGLAF 724
+ E+ L+ ++ N + K D R + P L + + + +GLAF
Sbjct: 72 IHTENKLTLVFEFMDN--------DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
H I+H D+ N+L++ + LG+ +++ T S V + Y P+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLM 181
Query: 785 TMQVTAPG-NVYSYGVVLLEILTTR 808
+ + +++S G +L E++T +
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 41/232 (17%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV-- 673
G F V+KA + + + +VK D+ QN+ E+ L + H+N+++ IG
Sbjct: 35 GRFGCVWKAQLLNEYV-AVKIFPIQDKQSW--QNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 674 -IYEDVAL-LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV--- 728
DV L L+ + G+L+ L + W IA +A GLA+LH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANV------VSWNELCHIAETMARGLAYLHEDIPG 143
Query: 729 -------AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPE 781
AI H DI S NVLL + + + ++ + K G+ Y+ PE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 782 Y---AYTMQVTA--PGNVYSYGVVLLEILTT-----------RLPVEEDFGE 817
A Q A ++Y+ G+VL E+ + LP EE+ G+
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 69 DLSRLQLRGN-ITLV----SELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFG 123
D++ L L GN TLV S K L +DLSNN S +F N+++L L LS N+
Sbjct: 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 124 GVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
+ PR LK LR ++ N + L L + +N L
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 252 HCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVP-EFSQCSNLTLLNLA 310
C L + +N + V+P+ I +T D N + +VP E S +LTL++L+
Sbjct: 7 ECTCLDTVVRCSNKGLKVLPKGIPR--DVTELYLDGNQFT--LVPKELSNYKHLTLIDLS 62
Query: 311 SNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAI 370
+N + + + L LIL N L P++ K+L L L N + A
Sbjct: 63 NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAF 122
Query: 371 CDMSRLQYLLLGQNSL 386
D+S L +L +G N L
Sbjct: 123 NDLSALSHLAIGANPL 138
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 299 SQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLS 358
++C+ L + SN V+P + + ++ EL L N F +PK + K+L +DLS
Sbjct: 6 TECTCLDTVVRCSNKGLKVLPKGIPR--DVTELYLDGNQ-FTLVPKELSNYKHLTLIDLS 62
Query: 359 NNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIG--NCMKLLQLH 404
NNR + + +M++L L+L N L+ P ++LL LH
Sbjct: 63 NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 198 IPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLS 257
+P L + L L++L +N++ +S +L L+L+ NRL P KSL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 258 NIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNL 290
+ + ND+ V A ++S L++ N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++ I E + + L H+ LV+ G + ++ Y+ NG L L E +R
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQ 103
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
L + V E + +L +H D+++ N L++ + + +S+ + + T+S
Sbjct: 104 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT-RLPVE 812
+ + PPE + ++ +++++GV++ EI + ++P E
Sbjct: 164 RGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 17/219 (7%)
Query: 596 AIDLDAVVKAT-MKDSNMIYCGTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQN 649
A+ L ++K T K ++ G F TVYK + +P G + +++K L+ + T
Sbjct: 2 AMALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANK 59
Query: 650 KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPD 707
+++ E ++ + + ++ R +G + V L+ +P G L + H+ Y +
Sbjct: 60 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLN 118
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
W + +AEG+ +L ++H D+++ NVL+ + + ++KLL +
Sbjct: 119 W------CVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ E T +V+SYGV + E++T
Sbjct: 173 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 651 MIRELEKLSKLCHDNLVRPIGFVIYEDVAL-LLHNYLPNGTLAQLLHESTKQ---PDYRP 706
+ E +++L H NLV+ +G ++ E L ++ Y+ G+L L + D
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--- 289
Query: 707 DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
L ++ V E + +L +H D+++ NVL+ D + + ++K ++ T
Sbjct: 290 ---CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT-TRLP 810
+ + PE + + +V+S+G++L EI + R+P
Sbjct: 347 KLPV-----KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 631 ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGT 690
IL+ ++++S+D K+ RE++ L H ++++ + ++ Y+ G
Sbjct: 48 ILNRQKIRSLDVV-----GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE 102
Query: 691 LAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLL 750
L + ++ R D + + G+ + H ++H D+ NVLLDA +
Sbjct: 103 LFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI 157
Query: 751 GEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRL 809
+ +S ++ S G + GS Y PE P +++S GV+L +L L
Sbjct: 158 ADFGLSNMM--SDGEF-LRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL 214
Query: 810 PVEED 814
P ++D
Sbjct: 215 PFDDD 219
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 637 LKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLH 696
+K MD + + E+ + HDN+V + D ++ +L G L ++
Sbjct: 75 VKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVT 134
Query: 697 ESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEIS 756
+ R + ++ + V L++LH+ +IH DI S ++LL +D G I++S
Sbjct: 135 HT------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD-----GRIKLS 183
Query: 757 KL---LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
SK + G+ ++ PE + +++S G++++E++ P
Sbjct: 184 DFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 23 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 79
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P+ P + +A +A+G
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N + DF +G+ +++ + + KG + V +
Sbjct: 138 MAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 193
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 38/282 (13%)
Query: 65 VVKLDLSRLQLRGNITLVSELKALKRLDLSNNAF-------SGTIPSAF-----GNLSEL 112
V +LDL+ L G + + + +LK+L L+ N+F + + PS GN+ +L
Sbjct: 279 VQELDLTAAHLNGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKL 338
Query: 113 EF-------------LDLSLNKF--GGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSL 157
+ LDLS + +L +L+ L++ N+S N +G K
Sbjct: 339 DLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKEC 398
Query: 158 EKLEDFQVSSNKLNGSIPFW-VGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
+LE V+ L+ P NL LRV L L + +L LNL N
Sbjct: 399 PQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGN 458
Query: 217 QLE-GPIPKS--IFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRA 273
+ G I K+ + G LE+L+L+ L + ++++++ + +N L G A
Sbjct: 459 SFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDA 518
Query: 274 IGNVSGLTYFEADNNNLS---GEIVPEFSQCSNLTLLNLASN 312
+ ++ GL Y +NN+ ++P SQ S ++NL+ N
Sbjct: 519 LSHLKGL-YLNMASNNIRIIPPHLLPALSQQS---IINLSHN 556
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 121/312 (38%), Gaps = 57/312 (18%)
Query: 88 LKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLV 147
++ LDL+ +G +PS ++ L+ L L+ N F + S LR I N+
Sbjct: 279 VQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRK 337
Query: 148 GEIPDE-LKSLEKLEDFQVSSNKLNGS--IPFWVGNLTNLRVFTAYENQLVGEIPDNLGS 204
++ L+ LE L+ +S + + S + NL +L+ N+ +G
Sbjct: 338 LDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKE 397
Query: 205 VSELELLNLHSNQLEGPIPKSIFASGKL-EVLVLTQNRLTGDIPELVGHCKSLSNIRIGN 263
+LELL++ L P S F + L VL L+ HC
Sbjct: 398 CPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLS-------------HC---------- 434
Query: 264 NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFT--GVIPPE 321
+ N +L + +L LNL N F +
Sbjct: 435 ------------------LLDTSNQHLLAGL-------QDLRHLNLQGNSFQDGSISKTN 469
Query: 322 LGQLI-NLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLL 380
L Q++ +L+ LIL +L ++ +N+N LDLS+N G +A+ + L YL
Sbjct: 470 LLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLN 528
Query: 381 LGQNSLKGEIPH 392
+ N+++ PH
Sbjct: 529 MASNNIRIIPPH 540
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVL---LDADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V + + +LH + I+H D+ N+L LD D K ++ + +SK+ DP + +S G+
Sbjct: 125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGT 181
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
GY+ PE + + +S GV+ +L P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 602 VVKAT-MKDSNMIYCGTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIREL 655
++K T K ++ G F TVYK + +P G + +++K L+ + T +++ E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEA 75
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLS 713
++ + + ++ R +G + V L++ +P G L + H+ Y +W
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW----- 129
Query: 714 IAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG 773
+ +A+G+ +L ++H D+++ NVL+ + + ++KLL +
Sbjct: 130 -CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 774 SFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ E T +V+SYGV + E++T
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVL---LDADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V + + +LH + I+H D+ N+L LD D K ++ + +SK+ DP + +S G+
Sbjct: 125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGT 181
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
GY+ PE + + +S GV+ +L P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVL---LDADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V + + +LH + I+H D+ N+L LD D K ++ + +SK+ DP + +S G+
Sbjct: 125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGT 181
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
GY+ PE + + +S GV+ +L P
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
G F VYKA +L+ ++ +D + E++ L+ H N+V+ + Y
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIG-VAEGLAFLHHVAIIHLD 734
E+ +L + G + ++ E RP +++ + + L +LH IIH D
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF----GYIPPEY-----AYT 785
+ +GN+L D G+I+++ +K T + SF ++ PE +
Sbjct: 134 LKAGNILFTLD-----GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 786 MQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+V+S G+ L+E+ P E
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPHHE 216
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 244 GDIPELVGHCKSLSNIR---IGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQ 300
DI + G + L N+R +G N L + A+ ++ LTY N L F +
Sbjct: 51 SDIKSVQG-IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK 107
Query: 301 CSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSIL-ACKNLNKLDLSN 359
+NL L L N + +L NL L LY N L +PK + NL +LDL N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQL-QSLPKGVFDKLTNLTRLDLDN 166
Query: 360 NRFNGTIPNAICD-MSRLQYLLLGQNSLKG 388
N+ ++P + D +++L+ L L N LK
Sbjct: 167 NQLQ-SLPEGVFDKLTQLKQLSLNDNQLKS 195
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 63 AFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKF 122
A +K +L + + +T +EL ++ ++ ++NN+ ++ L + +L L NK
Sbjct: 19 AETIKANLKKKSVTDAVT-QNELNSIDQI-IANNSDIKSV-QGIQYLPNVRYLALGGNKL 75
Query: 123 GGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWV-GNL 181
+ L L +L + ++ N L L L++ + N+L S+P V L
Sbjct: 76 HDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKL 132
Query: 182 TNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQN 240
TNL Y NQL ++ L L+L +NQL+ +P+ +F +L+ L L N
Sbjct: 133 TNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDN 191
Query: 241 RLTGDIPELVGHCKSLSNIRIGNN 264
+L + SL++I + NN
Sbjct: 192 QLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 202 LGSVSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIR 260
L ++ L L L NQL+ +P +F L+ LVL +N+L + +L+ +
Sbjct: 81 LKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 261 IGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPE--FSQCSNLTLLNLASNGFTGVI 318
+ +N L + ++ LT + DNN L +PE F + + L L+L N V
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS--LPEGVFDKLTQLKQLSLNDNQLKSVP 197
Query: 319 PPELGQLINLQELILYEN 336
+L +L + L N
Sbjct: 198 DGVFDRLTSLTHIWLLNN 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 140
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 201 THQSDVWSYGVTVWELMT 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 26 GSFGMVYEGV-AKGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 82
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P P + +A +A+G
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 141 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 196
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 43/212 (20%)
Query: 615 CGTFSTVYKAVM---PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG 671
CG F +V + V + +++K LK T +M+RE + + +L + +VR IG
Sbjct: 346 CGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 672 FVIYEDVALL--------LHNYL-------PNGTLAQLLHESTKQPDYRPDWPTRLSIAI 716
E + L+ LH +L P +A+LLH+
Sbjct: 404 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ------------------- 444
Query: 717 GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPSKGTASISAVAGS 774
V+ G+ +L +H ++++ NVLL + + +SK L D S TA SA
Sbjct: 445 -VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR-SAGKWP 502
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE + ++ +V+SYGV + E L+
Sbjct: 503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 4/188 (2%)
Query: 198 IPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLS 257
IP N+ + + + L+L SN+L K+ KL +L L N+L + K+L
Sbjct: 31 IPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 258 NIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGV 317
+ + +N L + + L D N L F + LT L+L N +
Sbjct: 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148
Query: 318 IPPELGQLINLQELILYENSLFGEIPKSIL-ACKNLNKLDLSNNRFNGTIPNAICDMSRL 376
+L +L+EL LY N L +P+ L L L NN+ A + +L
Sbjct: 149 PKGVFDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKL 207
Query: 377 QYLLLGQN 384
+ L L +N
Sbjct: 208 KMLQLQEN 215
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 30/179 (16%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL-- 146
K+LDL +N S AF L++L L L+ NK + LK+L +++N L
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA 99
Query: 147 -----------VGEI-----------PDELKSLEKLEDFQVSSNKLNGSIPFWV-GNLTN 183
+ E+ P SL KL + N+L S+P V LT+
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTS 158
Query: 184 LRVFTAYENQLVGEIPDN-LGSVSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQN 240
L+ Y NQL +P+ ++EL+ L L +NQL+ +P+ F S KL++L L +N
Sbjct: 159 LKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKLKMLQLQEN 215
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 34/182 (18%)
Query: 342 IPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLK---GEIPHEIGNC- 397
IP +I A + KLDL +N+ + A +++L+ L L N L+ I E+ N
Sbjct: 31 IPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 398 --------------------MKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHG 437
+ L +L + N L S+PP + L+L +N L
Sbjct: 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ- 146
Query: 438 SLPPELGKLDKLVSFD---VSNNQLSGTIPSALKGMLSLIEVNFSNNLLTG-PVPSFVPF 493
SLP G DKL S + NNQL A + L + NN L P +F
Sbjct: 147 SLPK--GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204
Query: 494 QK 495
+K
Sbjct: 205 EK 206
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 86/226 (38%), Gaps = 62/226 (27%)
Query: 681 LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA--IIHLDISSG 738
L+ ++ P G+L +LHE T ++ D + A+ A G AFLH + I ++S
Sbjct: 86 LITHWXPYGSLYNVLHEGT---NFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSR 142
Query: 739 NVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP------- 791
+V +D D TA IS F + P Y AP
Sbjct: 143 SVXIDED------------------XTARISXADVKFSFQSPGRXYAPAWVAPEALQKKP 184
Query: 792 -------GNVYSYGVVLLEILTTRLPVEE----DFGEGVDLVKWVHGAPARGETPEQILD 840
+ +S+ V+L E++T +P + + G V L+
Sbjct: 185 EDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKV------------------ALE 226
Query: 841 ARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEIK 886
T+ G + K+ +C + PAKRPK +V +L++ +
Sbjct: 227 GLRPTIPPGISPHV---SKLXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 138
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 87 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 139
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 70 LSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV 125
++ L+L GN ++ ++ L+++K LDL++ + P LS L+ L L LN+ +
Sbjct: 93 ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNI 150
Query: 126 IPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLR 185
P L L +L++ +I NN + P L +L KL + NK++ P +L NL
Sbjct: 151 SP--LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISPL--ASLPNLI 204
Query: 186 VFTAYENQL 194
+NQ+
Sbjct: 205 EVHLKDNQI 213
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 30/168 (17%)
Query: 181 LTNLRVFTAYENQLVGEIP-DNLGSVSELEL-------------------LNLHSNQLEG 220
L NL +NQ+ P NL ++ELEL L+L S Q+
Sbjct: 68 LNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITD 127
Query: 221 PIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGL 280
P + L+VL L N++T +I L G +L + IGNN + + P A N+S L
Sbjct: 128 VTP--LAGLSNLQVLYLDLNQIT-NISPLAG-LTNLQYLSIGNNQVNDLTPLA--NLSKL 181
Query: 281 TYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINL 328
T AD+N +S +I P + NL ++L N + V P L L NL
Sbjct: 182 TTLRADDNKIS-DISP-LASLPNLIEVHLKDNQISDVSP--LANLSNL 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 84 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 136
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIY 675
GT+ VYKA G I+++KR++ +D + IRE+ L +L H N+V I +
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAI-GVAEGLAFLHHVAIIHLD 734
E L+ ++ L T D +++ I + + G+A H I+H D
Sbjct: 91 ERCLTLVFEFMEKDLKKVLDENKTGLQD------SQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY-TMQVTAPGN 793
+ N+L+++D L + +++ + + V + Y P+ + + + +
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVD 202
Query: 794 VYSYGVVLLEILTTR 808
++S G + E++T +
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 85 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 137
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 198 THQSDVWSYGVTVWELMT 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 560 RERQEKASKSADVADSGASSQPSIIAGNVLVENLRQAIDLDAVVKATMKDS---NMIYCG 616
R RQE +P ++ E R A+ L VV S N I G
Sbjct: 30 RARQENGMPEKPPGPRSPQREPQRVSH----EQFRAALQL--VVDPGDPRSYLDNFIKIG 83
Query: 617 TFST---VYKAVMPSGLILSVKRL---KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
ST V SG +++VK++ K R ++ ++ ++R+ + H+N+V
Sbjct: 84 EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMY 137
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+ D ++ +L G L ++ + R + ++ + V + L+ LH +
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQGV 191
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH DI S ++LL D + L + + SK + G+ ++ PE +
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 791 PGNVYSYGVVLLEILTTRLP 810
+++S G++++E++ P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 155/401 (38%), Gaps = 52/401 (12%)
Query: 135 DLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQL 194
+ R ++ N + DE S LE+ +++ N ++ P NL NLR
Sbjct: 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT-------- 84
Query: 195 VGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHC 253
L L SN+L+ IP +F L L +++N++ + +
Sbjct: 85 ----------------LGLRSNRLKL-IPLGVFTGLSNLTKLDISENKIVILLDYMFQDL 127
Query: 254 KSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNG 313
+L ++ +G+NDLV + RA ++ L + NL+ S L +L L
Sbjct: 128 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN 187
Query: 314 FTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDM 373
+ +L L+ L + + + L NL L +++ A+ +
Sbjct: 188 INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247
Query: 374 SRLQYLLLGQN---SLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNL 430
L++L L N +++G + HE+ ++L ++ + L P + L++ LN+
Sbjct: 248 VYLRFLNLSYNPISTIEGSMLHEL---LRLQEIQLVGGQLAVVEPYAFRGLNYLRV-LNV 303
Query: 431 SFNH---LHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
S N L S+ +G L+ L+ + +N L+ L +NF+ T
Sbjct: 304 SGNQLTTLEESVFHSVGNLETLI---LDSNPLACDC-RLLWVFRRRWRLNFNRQQPTCAT 359
Query: 488 PSFV---PFQKSPNSSFFGNKGLCGEPLSFSCGNANGPDSK 525
P FV F+ P+ P F+C A D K
Sbjct: 360 PEFVQGKEFKDFPDVLL---------PNYFTCRRARIRDRK 391
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 117/291 (40%), Gaps = 35/291 (12%)
Query: 222 IPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLT 281
+P+ I +L L L +NR+ + L + + N + V P A N+ L
Sbjct: 26 VPEGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLR 83
Query: 282 YFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGE 341
+N L + F+ SNLT L+++ N ++ L NL+ L + +N L
Sbjct: 84 TLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI 143
Query: 342 IPKSILACKNLNKLDLSNNRFNGTIP--------------------NAICDMS--RLQYL 379
++ +L +L L +IP NAI D S RL L
Sbjct: 144 SHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRL 202
Query: 380 LLGQNSLKGEIPHEIGNC---MKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFN--- 433
+ + S + NC + L L I LT + H+ L+ LNLS+N
Sbjct: 203 KVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF-LNLSYNPIS 261
Query: 434 HLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLT 484
+ GS+ EL +L ++ + QL+ P A +G+ L +N S N LT
Sbjct: 262 TIEGSMLHELLRLQEI---QLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 88 LKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLV 147
L+ L+L+ N S P AF NL L L L N+ + L +L +IS N +V
Sbjct: 58 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 117
Query: 148 GEIPDELKSLEKLEDFQVSSNKL 170
+ + L L+ +V N L
Sbjct: 118 ILLDYMFQDLYNLKSLEVGDNDL 140
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLK--SMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
GT+ VYKA G I+++KR++ + D I + IRE+ L +L H N+V I +
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGI---PSTAIREISLLKELHHPNIVSLIDVI 88
Query: 674 IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAI-GVAEGLAFLHHVAIIH 732
E L+ ++ L T D +++ I + + G+A H I+H
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQD------SQIKIYLYQLLRGVAHCHQHRILH 142
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY-TMQVTAP 791
D+ N+L+++D L + +++ + + V + Y P+ + + +
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTS 200
Query: 792 GNVYSYGVVLLEILTTR 808
+++S G + E++T +
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 85 GICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 137
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 198 THQSDVWSYGVTVWELMT 215
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 82 VSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNI 141
+ L L+ L+L+ N + P NL +L L + NK + L +L +LR +
Sbjct: 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL 117
Query: 142 SNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDN 201
+ + + P L +L K + +N N S + N T L T E+++ P
Sbjct: 118 NEDNISDISP--LANLTKXYSLNLGANH-NLSDLSPLSNXTGLNYLTVTESKVKDVTP-- 172
Query: 202 LGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRI 261
+ ++++L L+L+ NQ+E P + S L N++T P V + L++++I
Sbjct: 173 IANLTDLYSLSLNYNQIEDISPLASLTS--LHYFTAYVNQITDITP--VANXTRLNSLKI 228
Query: 262 GNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPE 321
GNN + + P A N+S LT+ E N +S + + L LN+ SN + +
Sbjct: 229 GNNKITDLSPLA--NLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQIS-----D 279
Query: 322 LGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLL 381
+ L NL +L NSLF L+NN+ I ++ L L L
Sbjct: 280 ISVLNNLSQL----NSLF-----------------LNNNQLGNEDXEVIGGLTNLTTLFL 318
Query: 382 GQNSLKGEIP 391
QN + P
Sbjct: 319 SQNHITDIRP 328
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 17/243 (6%)
Query: 78 NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLN-KFGGVIPRELGSLKDL 136
+I+ + L L+ L L+ + S P NL++ L+L N + P L + L
Sbjct: 102 DISALQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSP--LSNXTGL 157
Query: 137 RFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG 196
+ ++ + + P + +L L ++ N++ P +LT+L FTAY NQ+
Sbjct: 158 NYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPL--ASLTSLHYFTAYVNQITD 213
Query: 197 EIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSL 256
P + + + L L + +N++ P + + +L L + N+++ DI V L
Sbjct: 214 ITP--VANXTRLNSLKIGNNKITDLSPLANLS--QLTWLEIGTNQIS-DI-NAVKDLTKL 267
Query: 257 SNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTG 316
+ +G+N + + + N+S L +NN L E +NLT L L+ N T
Sbjct: 268 KXLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITD 325
Query: 317 VIP 319
+ P
Sbjct: 326 IRP 328
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 616 GTFSTVYK-AVMPSGLILSVKRLKSMDRTIIHHQNKMI-RELEKLSKLCHD--NLVRPIG 671
GT V+K +G +++VK+++ R+ +NK I +L+ + K HD +V+ G
Sbjct: 36 GTCGQVWKMRFRKTGHVIAVKQMR---RSGNKEENKRILMDLDVVLK-SHDCPYIVQCFG 91
Query: 672 -FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRL--SIAIGVAEGLAFLHHV 728
F+ DV + + GT A+ L + + P P R+ + + + + L +L
Sbjct: 92 TFITNTDVFIAMELM---GTCAEKLKKRMQGP-----IPERILGKMTVAIVKALYYLKEK 143
Query: 729 -AIIHLDISSGNVLLDADFKPLLGEIEIS-KLLDPSKGTASISAVAGSFGYIPPEYAYTM 786
+IH D+ N+LLD + L + IS +L+D S AG Y+ PE
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS----AGCAAYMAPERIDPP 199
Query: 787 QVTAP-----GNVYSYGVVLLEILTTRLPVE 812
T P +V+S G+ L+E+ T + P +
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYK 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKL-------CHDNLVR 668
G+F VY+ V G++ + +T+ + M +E L++ CH ++VR
Sbjct: 36 GSFGMVYEGVA-KGVVKDEPETRVAIKTV-NEAASMRERIEFLNEASVMKEFNCH-HVVR 92
Query: 669 PIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYR-------PDWPTRLSIAIGVAEG 721
+G V L++ + G L L + +P P + +A +A+G
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS----KGTASISAVAGSFGY 777
+A+L+ +H D+++ N ++ DF +G+ +++ + + KG + V +
Sbjct: 151 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----W 206
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE T +V+S+GVVL EI T
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 31/237 (13%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A + I+++K L +++ + HQ + RE+E S L H N++R +
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSHLRHPNILRMYNY 82
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ + P G L + L Q R D + +A+ L + H +IH
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+L+ GE++I+ + + G+ Y+PPE
Sbjct: 138 RDIKPENLLMGYK-----GELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 792 GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+++ GV+ E L P + +P+ ET +I++ L F
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFD---------------SPSHTETHRRIVNVDLKFPPF 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 31/237 (13%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A + I+++K L +++ + HQ + RE+E S L H N++R +
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSHLRHPNILRMYNY 82
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ + P G L + L Q R D + +A+ L + H +IH
Sbjct: 83 FHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+L+ GE++I+ + + G+ Y+PPE
Sbjct: 138 RDIKPENLLMGYK-----GELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 792 GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+++ GV+ E L P + +P+ ET +I++ L F
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFD---------------SPSHTETHRRIVNVDLKFPPF 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 31/237 (13%)
Query: 616 GTFSTVYKA-VMPSGLILSVKRL--KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F VY A + I+++K L +++ + HQ + RE+E S L H N++R +
Sbjct: 26 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSHLRHPNILRMYNY 83
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
L+ + P G L + L Q R D + +A+ L + H +IH
Sbjct: 84 FHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 733 LDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
DI N+L+ GE++I+ + + G+ Y+PPE
Sbjct: 139 RDIKPENLLMGYK-----GELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 193
Query: 792 GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+++ GV+ E L P + +P+ ET +I++ L F
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFD---------------SPSHTETHRRIVNVDLKFPPF 235
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 1/174 (0%)
Query: 253 CKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFE-ADNNNLSGEIVPEFSQCSNLTLLNLAS 311
C++L+ + + +N L + A ++ L + +DN L F L L+L
Sbjct: 54 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 113
Query: 312 NGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAIC 371
G + P L LQ L L +N+L + NL L L NR + A
Sbjct: 114 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 173
Query: 372 DMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ 425
+ L LLL QN + PH + +L+ L++ +N L+ + +R LQ
Sbjct: 174 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 227
Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 27/185 (14%)
Query: 85 LKALKRLDLSNNA-FSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISN 143
L L++LDLS+NA P+ F L L L L + P L L++ + +
Sbjct: 78 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 137
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDN-L 202
N L D + L GNLT+L + + +P+
Sbjct: 138 NALQALPDDTFRDL---------------------GNLTHLFL----HGNRISSVPERAF 172
Query: 203 GSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIG 262
+ L+ L LH N++ P + G+L L L N L+ E + ++L +R+
Sbjct: 173 RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLN 232
Query: 263 NNDLV 267
+N V
Sbjct: 233 DNPWV 237
Score = 36.6 bits (83), Expect = 0.058, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 8/221 (3%)
Query: 185 RVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTG 244
+V T+ Q + +P + + S+ + LH N++ S A L +L L N L
Sbjct: 12 KVTTSCPQQGLQAVPVGIPAASQR--IFLHGNRISHVPAASFRACRNLTILWLHSNVLAR 69
Query: 245 -DIPELVGHCKSLSNIRIGNN-DLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPE-FSQC 301
D G L + + +N L V P + L D L E+ P F
Sbjct: 70 IDAAAFTG-LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGL 127
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
+ L L L N + L NL L L+ N + ++ +L++L L NR
Sbjct: 128 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 187
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQ 402
P+A D+ RL L L N+L +P E ++ LQ
Sbjct: 188 VAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQ 227
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 73/203 (35%), Gaps = 1/203 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
A +R+ L N S ++F L L L N + L L ++S+N
Sbjct: 32 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 91
Query: 147 VGEI-PDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSV 205
+ + P L +L + L P L L+ +N L D +
Sbjct: 92 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 151
Query: 206 SELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNND 265
L L LH N++ ++ L+ L+L QNR+ P L + + N+
Sbjct: 152 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 211
Query: 266 LVGVIPRAIGNVSGLTYFEADNN 288
L + A+ + L Y ++N
Sbjct: 212 LSALPTEALAPLRALQYLRLNDN 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 611 NMIYCGTFST---VYKAVMPSGLILSVKRL---KSMDRTIIHHQNKMIRELEKLSKLCHD 664
N I G ST V SG +++VK++ K R ++ ++ ++R+ + H+
Sbjct: 35 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HE 88
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N+V + D ++ +L G L ++ + R + ++ + V + L+
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSV 142
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
LH +IH DI S ++LL D + L + + SK + G+ ++ PE
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELIS 200
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLP 810
+ +++S G++++E++ P
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 25/283 (8%)
Query: 616 GTFSTVYKAVMPS-GL-----ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + GL I++ K+L + D K+ RE KL H N+VR
Sbjct: 40 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF------QKLEREARICRKLQHPNIVRL 93
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
+ E L+ + + G L E ++ + I + E +A+ H
Sbjct: 94 HDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQ-QILESIAYCHSNG 148
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVT 789
I+H ++ N+LL + K ++ L + + AG+ GY+ PE +
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 790 APGNVYSYGVVLLEILTTRLPV-EEDFGEGVDLVK---WVHGAPARGE-TPE--QILDAR 842
P ++++ GV+L +L P +ED +K + + +P TPE ++D+
Sbjct: 209 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 268
Query: 843 LSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
L TV+ R ALKV +C A + V+ L++
Sbjct: 269 L-TVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKF 310
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 611 NMIYCGTFST---VYKAVMPSGLILSVKRL---KSMDRTIIHHQNKMIRELEKLSKLCHD 664
N I G ST V SG +++VK++ K R ++ ++ ++R+ + H+
Sbjct: 24 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HE 77
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N+V + D ++ +L G L ++ + R + ++ + V + L+
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSV 131
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
LH +IH DI S ++LL D + L + + SK + G+ ++ PE
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELIS 189
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLP 810
+ +++S G++++E++ P
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 560 RERQEKASKSADVADSGASSQPSIIAGNVLVENLRQAIDLDAVVKATMKDS---NMIYCG 616
R RQE +P ++ E R A+ L VV S N I G
Sbjct: 107 RARQENGMPEKPPGPRSPQREPQRVSH----EQFRAALQL--VVDPGDPRSYLDNFIKIG 160
Query: 617 TFST---VYKAVMPSGLILSVKRL---KSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
ST V SG +++VK++ K R ++ ++ ++R+ + H+N+V
Sbjct: 161 EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMY 214
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+ D ++ +L G L ++ + R + ++ + V + L+ LH +
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQGV 268
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
IH DI S ++LL D + L + + SK + G+ ++ PE +
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 791 PGNVYSYGVVLLEILTTRLP 810
+++S G++++E++ P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 611 NMIYCGTFST---VYKAVMPSGLILSVKRL---KSMDRTIIHHQNKMIRELEKLSKLCHD 664
N I G ST V SG +++VK++ K R ++ ++ ++R+ + H+
Sbjct: 33 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HE 86
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N+V + D ++ +L G L ++ + R + ++ + V + L+
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSV 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
LH +IH DI S ++LL D + L + + SK + G+ ++ PE
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELIS 198
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLP 810
+ +++S G++++E++ P
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 611 NMIYCGTFST---VYKAVMPSGLILSVKRL---KSMDRTIIHHQNKMIRELEKLSKLCHD 664
N I G ST V SG +++VK++ K R ++ ++ ++R+ + H+
Sbjct: 28 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HE 81
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N+V + D ++ +L G L ++ + R + ++ + V + L+
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSV 135
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
LH +IH DI S ++LL D + L + + SK + G+ ++ PE
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELIS 193
Query: 785 TMQVTAPGNVYSYGVVLLEILTTRLP 810
+ +++S G++++E++ P
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 84 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 136
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 602 VVKAT-MKDSNMIYCGTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIREL 655
++K T K ++ G F TVYK + +P G + +++K L+ + T +++ E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEA 75
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLS 713
++ + + ++ R +G + V L+ +P G L + H+ Y +W
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW----- 129
Query: 714 IAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG 773
+ +A+G+ +L ++H D+++ NVL+ + + ++KLL +
Sbjct: 130 -CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 774 SFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ E T +V+SYGV + E++T
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 1/174 (0%)
Query: 253 CKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFE-ADNNNLSGEIVPEFSQCSNLTLLNLAS 311
C++L+ + + +N L + A ++ L + +DN L F L L+L
Sbjct: 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 114
Query: 312 NGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAIC 371
G + P L LQ L L +N+L + NL L L NR + A
Sbjct: 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174
Query: 372 DMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ 425
+ L LLL QN + PH + +L+ L++ +N L+ + +R LQ
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228
Score = 37.7 bits (86), Expect = 0.032, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 27/185 (14%)
Query: 85 LKALKRLDLSNNA-FSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISN 143
L L++LDLS+NA P+ F L L L L + P L L++ + +
Sbjct: 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 138
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDN-L 202
N L D + L GNLT+L + + +P+
Sbjct: 139 NALQALPDDTFRDL---------------------GNLTHLFL----HGNRISSVPERAF 173
Query: 203 GSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIG 262
+ L+ L LH N++ P + G+L L L N L+ E + ++L +R+
Sbjct: 174 RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLN 233
Query: 263 NNDLV 267
+N V
Sbjct: 234 DNPWV 238
Score = 36.2 bits (82), Expect = 0.074, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 8/221 (3%)
Query: 185 RVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTG 244
+V T+ Q + +P + + S+ + LH N++ S A L +L L N L
Sbjct: 13 KVTTSCPQQGLQAVPVGIPAASQR--IFLHGNRISHVPAASFRACRNLTILWLHSNVLAR 70
Query: 245 -DIPELVGHCKSLSNIRIGNN-DLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPE-FSQC 301
D G L + + +N L V P + L D L E+ P F
Sbjct: 71 IDAAAFTG-LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGL 128
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
+ L L L N + L NL L L+ N + ++ +L++L L NR
Sbjct: 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQ 402
P+A D+ RL L L N+L +P E ++ LQ
Sbjct: 189 VAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQ 228
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 73/203 (35%), Gaps = 1/203 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
A +R+ L N S ++F L L L N + L L ++S+N
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92
Query: 147 VGEI-PDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSV 205
+ + P L +L + L P L L+ +N L D +
Sbjct: 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152
Query: 206 SELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNND 265
L L LH N++ ++ L+ L+L QNR+ P L + + N+
Sbjct: 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212
Query: 266 LVGVIPRAIGNVSGLTYFEADNN 288
L + A+ + L Y ++N
Sbjct: 213 LSALPTEALAPLRALQYLRLNDN 235
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEI----------EISKLLDP 761
L I I +AE + FLH ++H D+ N+ D +G+ E +L P
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 762 SKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTT 807
A+ G+ Y+ PE + + +++S G++L E+L +
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 86 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 138
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 85 LKALKRLDLSNNAFSGTIPSAFGNLSELEFLDL-SLNKFGGVIPRELGSLKDLRFFNISN 143
L L+ L L NN AF + L LDL L + + L +LR+ N+
Sbjct: 106 LSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGM 165
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLG 203
L +IP+ L +L +LE+ ++S N+L+ P LT+LR Q+ +
Sbjct: 166 CNL-KDIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFD 223
Query: 204 SVSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQN 240
+ LE LNL N L +P +F +LE + L N
Sbjct: 224 DLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHN 260
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 88/228 (38%), Gaps = 5/228 (2%)
Query: 183 NLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
N R EN + D + LE+L L N + + L L L NRL
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFE-ADNNNLSGEIVPEFSQC 301
T + + L + + NN + + A V L + + L F
Sbjct: 96 TTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 155
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
NL LNL + P L L+ L+EL L N L P S +L KL L + +
Sbjct: 156 VNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 213
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCM-KLLQLHIGSN 408
NA D+ L+ L L N+L +PH++ + +L ++H+ N
Sbjct: 214 VATIERNAFDDLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHN 260
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 82 VSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNI 141
++ L L+ L+LS N P +F L+ L L L + + LK L N+
Sbjct: 174 LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
Query: 142 SNNVLVGEIPDELKSLEKLEDFQVSSN 168
S+N L+ D L +LE ++ N
Sbjct: 234 SHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 87 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 139
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 168 NKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIF 227
+K + S+P G TN ++ ++NQ+ P S+ L+ L L SNQL G +P +F
Sbjct: 28 SKRHASVP--AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 228 AS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEAD 286
S +L VL L N+LT + L + + N L +PR I ++ LT+ D
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALD 143
Query: 287 NNNLSGEIVPEFSQCSNLTLLNLASNGF 314
N L F + S+LT L N +
Sbjct: 144 QNQLKSIPHGAFDRLSSLTHAYLFGNPW 171
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 91 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 143
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 204 THQSDVWSYGVTVWELMT 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+S + VA G+ FL IH D+++ N+LL + + + +++ + +
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 772 AGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPAR 831
++ PE + + +V+SYGV+L EI + + G+P
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS------------------LGGSPYP 303
Query: 832 GETPEQILDARLSTVSFGWRKEMLTA--LKVALLCTDSTPAKRPKMKKVVEMLQEI 885
G ++ +RL E T ++ L C P +RP+ ++VE L ++
Sbjct: 304 GVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 599 LDAVVKATMKDSNMIYCGTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEK 657
+D K+ +I G F V+KA G ++R+K ++ K RE++
Sbjct: 6 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK-------YNNEKAEREVKA 58
Query: 658 LSKLCHDNLVRPIGF---VIYE----DVALLLHNYLP----------------------N 688
L+KL H N+V G Y+ D +L +Y P
Sbjct: 59 LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 689 GTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP 748
GTL Q + K+ + D L + + +G+ ++H +IH D+ N+ L +
Sbjct: 119 GTLEQWIE---KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQV 175
Query: 749 LLGEIE-ISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEIL 805
+G+ ++ L + K T S G+ Y+ PE + ++Y+ G++L E+L
Sbjct: 176 KIGDFGLVTSLKNDGKRTRS----KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 108/285 (37%), Gaps = 63/285 (22%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVK--RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
I G + TVYKA P SG +++K R+ + + + + + L +L H N+VR
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 670 IGF-------------VIYEDVALLLHNYL----PNGTLAQLLHESTKQPDYRPDWPTRL 712
+ +++E V L YL P G A+ + + +Q
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ----------- 120
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
GL FLH I+H D+ N+L+ + L + ++++ +++ V
Sbjct: 121 -----FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVV 172
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTR--------------------LPVE 812
+ Y PE P +++S G + E+ + LP E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 813 EDFGEGVDLVKWVHGA-PARGETPEQILDARLSTVSFGWRKEMLT 856
+D+ V L + GA P RG P Q + + EMLT
Sbjct: 233 DDWPRDVSLPR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 274
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 602 VVKAT-MKDSNMIYCGTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIREL 655
++K T K ++ G F TVYK + +P G + +++K L+ + T +++ E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEA 68
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLS 713
++ + + ++ R +G + V L+ +P G L + H+ Y +W
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW----- 122
Query: 714 IAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAG 773
+ +A+G+ +L ++H D+++ NVL+ + + ++KLL +
Sbjct: 123 -CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 774 SFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
++ E T +V+SYGV + E++T
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 87 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 139
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 87 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 139
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 85 LKALKRLDLSNNAFSGTIPSAFGNLSELEFLDL-SLNKFGGVIPRELGSLKDLRFFNISN 143
L L+ L L NN AF + L LDL L + + L +LR+ N+
Sbjct: 106 LSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGM 165
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLG 203
L +IP+ L +L +LE+ ++S N+L+ P LT+LR Q+ +
Sbjct: 166 CNL-KDIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFD 223
Query: 204 SVSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQN 240
+ LE LNL N L +P +F +LE + L N
Sbjct: 224 DLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHN 260
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 88/228 (38%), Gaps = 5/228 (2%)
Query: 183 NLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRL 242
N R EN + D + LE+L L N + + L L L NRL
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 243 TGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFE-ADNNNLSGEIVPEFSQC 301
T + + L + + NN + + A V L + + L F
Sbjct: 96 TTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 155
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
NL LNL + P L L+ L+EL L N L P S +L KL L + +
Sbjct: 156 VNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 213
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCM-KLLQLHIGSN 408
NA D+ L+ L L N+L +PH++ + +L ++H+ N
Sbjct: 214 VATIERNAFDDLKSLEELNLSHNNLMS-LPHDLFTPLHRLERVHLNHN 260
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 82 VSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNI 141
++ L L+ L+LS N P +F L+ L L L + + LK L N+
Sbjct: 174 LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
Query: 142 SNNVLVGEIPDELKSLEKLEDFQVSSN 168
S+N L+ D L +LE ++ N
Sbjct: 234 SHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ DV L+ H L L ++ D+ + + GL ++H
Sbjct: 92 PARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTDDHVQ------FLIYQILRGLKYIHS 143
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT-M 786
IIH D+ N+ ++ D + + + +++ D ++ + Y PE M
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWM 198
Query: 787 QVTAPGNVYSYGVVLLEILTTR 808
+++S G ++ E+LT R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 185
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 186 VDIWSLGCIFAEMVTRR 202
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 32 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 90 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 142
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 203 THQSDVWSYGVTVWELMT 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 138
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + +KLL + ++ E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 51 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 109 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 161
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 222 THQSDVWSYGVTVWELMT 239
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 80 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 191
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 192 VDIWSLGCIFAEMVTRR 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 138
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + +KLL + ++ E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 84 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 136
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 50 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 102
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 103 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 151
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 206
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 183
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 184 VDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 80 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYSTA 191
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 192 VDIWSLGCIFAEMVTRR 208
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ DV L+ H L L ++ D+ + + GL ++H
Sbjct: 92 PARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTDDHVQ------FLIYQILRGLKYIHS 143
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT-M 786
IIH D+ N+ ++ D + + + +++ D ++ + Y PE M
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWM 198
Query: 787 QVTAPGNVYSYGVVLLEILTTR 808
+++S G ++ E+LT R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 36 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 94 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 146
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 207 THQSDVWSYGVTVWELMT 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 107/288 (37%), Gaps = 66/288 (22%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVK--RLKSMDRTIIHHQNKMIRE---LEKLSKLCHDNL 666
I G + TVYKA P SG +++K R+ + +RE L +L H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 667 VRPIGF-------------VIYEDVALLLHNYL----PNGTLAQLLHESTKQPDYRPDWP 709
VR + +++E V L YL P G A+ + + +Q
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ-------- 128
Query: 710 TRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS 769
GL FLH I+H D+ N+L+ + L + ++++ +++
Sbjct: 129 --------FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALT 177
Query: 770 AVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTR--------------------L 809
V + Y PE P +++S G + E+ + L
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237
Query: 810 PVEEDFGEGVDLVKWVHGA-PARGETPEQILDARLSTVSFGWRKEMLT 856
P E+D+ V L + GA P RG P Q + + EMLT
Sbjct: 238 PPEDDWPRDVSLPR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 282
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 44 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 96
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 145
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 200
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 51 CAAFDT------KTGLRVAVKKLSKPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 103
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 152
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 207
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 183
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 184 VDIWSLGCIFAEMVTRR 200
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 17/205 (8%)
Query: 616 GTFSTVYKAVMPSGLI-LSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VY S + +++K + D + + E+ L H N+V+ +G
Sbjct: 33 GTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
+ +P G+L+ LL +K + + T + EGL +LH I+H D
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLR--SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS----AVAGSFGYIPPEY--AYTMQV 788
I NVL++ G ++IS SK A I+ G+ Y+ PE
Sbjct: 148 IKGDNVLINT----YSGVLKISD-FGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 789 TAPGNVYSYGVVLLEILTTRLPVEE 813
+++S G ++E+ T + P E
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYE 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 20 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 78 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 130
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 191 THQSDVWSYGVTVWELMT 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 77 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 188
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 189 VDIWSLGCIFAEMVTRR 205
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L++ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 140
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + +KLL + ++ E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 201 THQSDVWSYGVTVWELMT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 115/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 44 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 96
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 145
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 200
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 51 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 103
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 152
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 207
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 51 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 103
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 104 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 152
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 207
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 17/205 (8%)
Query: 616 GTFSTVYKAVMPSGLI-LSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VY S + +++K + D + + E+ L H N+V+ +G
Sbjct: 19 GTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
+ +P G+L+ LL +K + + T + EGL +LH I+H D
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLR--SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS----AVAGSFGYIPPEY--AYTMQV 788
I NVL++ G ++IS SK A I+ G+ Y+ PE
Sbjct: 134 IKGDNVLINT----YSGVLKISD-FGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 789 TAPGNVYSYGVVLLEILTTRLPVEE 813
+++S G ++E+ T + P E
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYE 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGT 765
P + A ++ GL FLH II+ D+ NV+LD++ G I+I+ +
Sbjct: 120 PQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKEHMMDG 174
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + ++YGV+L E+L + P +
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 41 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 93
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 142
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 197
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 63/285 (22%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVK--RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
I G + TVYKA P SG +++K R+ + + + + + L +L H N+VR
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 670 IGF-------------VIYEDVALLLHNYL----PNGTLAQLLHESTKQPDYRPDWPTRL 712
+ +++E V L YL P G A+ + + +Q
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ----------- 120
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
GL FLH I+H D+ N+L+ + L + ++++ ++ V
Sbjct: 121 -----FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVV 172
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTR--------------------LPVE 812
+ Y PE P +++S G + E+ + LP E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 813 EDFGEGVDLVKWVHGA-PARGETPEQILDARLSTVSFGWRKEMLT 856
+D+ V L + GA P RG P Q + + EMLT
Sbjct: 233 DDWPRDVSLPR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 274
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGXVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 50 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 102
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 103 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 151
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 206
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 41 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 93
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 142
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 197
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 53 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 110
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 111 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 170
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 230
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 273
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 274 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 62 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 114
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 115 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 163
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 218
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 -TMQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 84 GICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 136
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + ++KLL + ++ E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 41 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 93
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 142
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 197
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 44 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 96
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 145
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 200
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 36 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 88
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 89 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 137
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 192
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 55 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 112
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 113 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 172
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 232
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 275
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 276 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 38 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 90
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 91 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 139
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 194
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 46 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 98
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 147
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 202
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNK---MIRELEKLSKLCHDNLVRPIG 671
G TVY A+ + +G ++++++ + Q K +I E+ + + + N+V +
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
+ D ++ YL G+L ++ E+ D ++ + L FLH +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCM------DEGQIAAVCRECLQALEFLHSNQVI 138
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H DI S N+LL D L + + P + + S + G+ ++ PE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 792 GNVYSYGVVLLEILTTRLP 810
+++S G++ +E++ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 58 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 115
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 116 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 175
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 235
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 278
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 279 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 308
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 45 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 97
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 146
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 201
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 59 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 111
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 160
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 215
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 35 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 87
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 136
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 191
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 58 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 110
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 111 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 159
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 214
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 36 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 88
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 89 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 137
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIML 192
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L H ++V GF D ++ +L +L H+ K +P
Sbjct: 57 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP 115
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + R + G +LH +IH D+ GN+ L+ D + +G+ ++ ++
Sbjct: 116 EAR--YYLR-----QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ + G+ YI PE + +V+S G ++ +L + P E
Sbjct: 169 GERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 44 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 96
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 97 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 145
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 200
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 41 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 93
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 94 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 142
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 197
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 37 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 89
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 90 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 138
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 193
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNK---MIRELEKLSKLCHDNLVRPIG 671
G TVY A+ + +G ++++++ + Q K +I E+ + + + N+V +
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
+ D ++ YL G+L ++ E+ D ++ + L FLH +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCM------DEGQIAAVCRECLQALEFLHSNQVI 138
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H DI S N+LL D L + + P + + S + G+ ++ PE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 792 GNVYSYGVVLLEILTTRLP 810
+++S G++ +E++ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNK---MIRELEKLSKLCHDNLVRPIG 671
G TVY A+ + +G ++++++ + Q K +I E+ + + + N+V +
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
+ D ++ YL G+L ++ E+ D ++ + L FLH +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCM------DEGQIAAVCRECLQALEFLHSNQVI 138
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H DI S N+LL D L + + P + + S + G+ ++ PE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 792 GNVYSYGVVLLEILTTRLP 810
+++S G++ +E++ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 76 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 187
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 188 VDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 77 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 188
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 189 VDIWSLGCIFAEMVTRR 205
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNK---MIRELEKLSKLCHDNLVRPIG 671
G TVY A+ + +G ++++++ + Q K +I E+ + + + N+V +
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
+ D ++ YL G+L ++ E+ D ++ + L FLH +I
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCM------DEGQIAAVCRECLQALEFLHSNQVI 139
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H DI S N+LL D L + + P + + S + G+ ++ PE
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 792 GNVYSYGVVLLEILTTRLP 810
+++S G++ +E++ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 75 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 186
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 187 VDIWSLGCIFAEMVTRR 203
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 33/165 (20%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSK--GTASISAVAGSF 775
+ EG+ +LH I+HLD+ N+LL + + LG+I+I K + + G+
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYP--LGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETP 835
Y+ PE +T ++++ G++ +LT H +P GE
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLT-------------------HTSPFVGEDN 238
Query: 836 EQILDARLSTVSFGWRKEMLTALKVALLCTD-------STPAKRP 873
++ +S V+ + +E ++ V+ L TD P KRP
Sbjct: 239 QETY-LNISQVNVDYSEETFSS--VSQLATDFIQSLLVKNPEKRP 280
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 76 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 187
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 188 VDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 75 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 186
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 187 VDIWSLGCIFAEMVTRR 203
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L H ++V GF D ++ +L +L H+ K +P
Sbjct: 81 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP 139
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + G +LH +IH D+ GN+ L+ D + +G+ ++ ++
Sbjct: 140 EAR-------YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 192
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ + G+ YI PE + +V+S G ++ +L + P E
Sbjct: 193 GERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 34/222 (15%)
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N V+P+ V + + Y NGTL L+H W + + E L++
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILEALSY 131
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS------------KGTASISAVA 772
+H IIH D+ N+ +D +G+ ++K + S + ++++
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 773 GSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPAR 831
G+ Y+ E T ++YS G++ E++ P E V+++K +
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM-ERVNILKKLRSVSI- 246
Query: 832 GETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRP 873
E P D + M K+ L D P KRP
Sbjct: 247 -EFPPDFDDNK-----------MKVEKKIIRLLIDHDPNKRP 276
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 45 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 97
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 146
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 201
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 185
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 186 VDIWSLGCIFAEMVTRR 202
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ DV L+ H L L ++ +S K D + + + GL ++H
Sbjct: 92 PARSLEEFNDVYLVTH--LMGADLNNIV-KSQKLTDDHVQF-----LIYQILRGLKYIHS 143
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT-M 786
IIH D+ N+ ++ D + + + + + D ++ + Y PE M
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-----EMTGYVATRWYRAPEIMLNWM 198
Query: 787 QVTAPGNVYSYGVVLLEILTTR 808
+++S G ++ E+LT R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 185
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 186 VDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L H ++V GF D ++ +L +L H+ K +P
Sbjct: 83 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP 141
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + G +LH +IH D+ GN+ L+ D + +G+ ++ ++
Sbjct: 142 EAR-------YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ + G+ YI PE + +V+S G ++ +L + P E
Sbjct: 195 GERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
I + E + LH + I+H D+ N+LLD D L + S LDP + + +V
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVC 184
Query: 773 GSFGYIPPE-YAYTMQVTAPG-----NVYSYGVVLLEILTTRLP 810
G+ Y+ PE +M PG +++S GV++ +L P
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 75 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 186
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 187 VDIWSLGCIFAEMVTRR 203
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 616 GTFSTVYKAV-MPSG--LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGF 672
G F TVYK + +P G + + V ++ + T +++ E ++ + + ++ R +G
Sbjct: 60 GAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 119
Query: 673 VIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
+ V L+ +P G L + H+ Y +W + +A+G+ +L +
Sbjct: 120 CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDRRL 172
Query: 731 IHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTA 790
+H D+++ NVL+ + + ++KLL + ++ E T
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 232
Query: 791 PGNVYSYGVVLLEILT 806
+V+SYGV + E++T
Sbjct: 233 QSDVWSYGVTVWELMT 248
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 62 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 114
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 115 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 163
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D + + Y PE
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMXGYVATRWYRAPEIML 218
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 55/221 (24%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSK--LCHDNLVRPIGFV 673
G + V++ + G ++VK S D + RE E + L HDN+ +GF+
Sbjct: 19 GRYGEVWRGLW-HGESVAVKIFSSRD------EQSWFRETEIYNTVLLRHDNI---LGFI 68
Query: 674 IYEDVA-------LLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLH 726
+ + L+ +Y +G+L L T +P L +A+ A GLA LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPH------LALRLAVSAACGLAHLH 122
Query: 727 --------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI--SAVAGSFG 776
AI H D S NVL+ ++ + + ++ ++ + I + G+
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 777 YIPPE-------------YAYTMQVTAPGNVYSYGVVLLEI 804
Y+ PE Y +T +++++G+VL EI
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWT-------DIWAFGLVLWEI 216
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 183
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 184 VDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 74 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 185
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 186 VDIWSLGCIFAEMVTRR 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 631 ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGT 690
IL+ ++++S+D K+ RE++ L H ++++ + ++ Y+ G
Sbjct: 43 ILNRQKIRSLDVV-----GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 691 LAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP 748
L + H ++ + R + LS + + H ++H D+ NVLLDA
Sbjct: 98 LFDYICKHGRVEEMEARRLFQQILS-------AVDYCHRHMVVHRDLKPENVLLDAHMNA 150
Query: 749 LLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTT 807
+ + +S ++ + + GS Y PE P +++S GV+L +L
Sbjct: 151 KIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 808 RLPVEED 814
LP +++
Sbjct: 208 TLPFDDE 214
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 183
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 184 VDIWSLGCIFAEMVTRR 200
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 45 CAAFDT------KTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 97
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 146
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 201
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 46 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 98
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 147
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D E++I ++ + Y PE
Sbjct: 148 IHSADIIHRDLKPSNLAVNED-----CELKILDFGLARHTADEMTGYVATRWYRAPEIML 202
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L H ++V GF D ++ +L +L H+ K +P
Sbjct: 59 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP 117
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + G +LH +IH D+ GN+ L+ D + +G+ ++ ++
Sbjct: 118 EAR-------YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-- 168
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +V+S G ++ +L + P E
Sbjct: 169 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 46 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 98
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 147
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D E++I ++ + Y PE
Sbjct: 148 IHSADIIHRDLKPSNLAVNED-----CELKILDFGLARHTADEMTGYVATRWYRAPEIML 202
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 86 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 138
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + +KLL + ++ E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
I + E + LH + I+H D+ N+LLD D L + S LDP + + V
Sbjct: 115 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVC 171
Query: 773 GSFGYIPPE-YAYTMQVTAPG-----NVYSYGVVLLEILTTRLP 810
G+ Y+ PE +M PG +++S GV++ +L P
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 63/285 (22%)
Query: 613 IYCGTFSTVYKAVMP-SGLILSVK--RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
I G + TVYKA P SG +++K R+ + + + + + L +L H N+VR
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 670 IGF-------------VIYEDVALLLHNYL----PNGTLAQLLHESTKQPDYRPDWPTRL 712
+ +++E V L YL P G A+ + + +Q
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ----------- 120
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
GL FLH I+H D+ N+L+ + L + ++++ ++ V
Sbjct: 121 -----FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVV 172
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTR--------------------LPVE 812
+ Y PE P +++S G + E+ + LP E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 813 EDFGEGVDLVKWVHGA-PARGETPEQILDARLSTVSFGWRKEMLT 856
+D+ V L + GA P RG P Q + + EMLT
Sbjct: 233 DDWPRDVSLPR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 274
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L H ++V GF D ++ +L +L H+ K +P
Sbjct: 59 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP 117
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + G +LH +IH D+ GN+ L+ D + +G+ ++ ++
Sbjct: 118 EAR-------YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-- 168
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +V+S G ++ +L + P E
Sbjct: 169 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 66 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYA 123
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 286
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 287 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 46 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 98
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 99 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 147
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D E++I ++ + Y PE
Sbjct: 148 IHSADIIHRDLKPSNLAVNED-----CELKILDFGLARHTADEMTGYVATRWYRAPEIML 202
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 616 GTFSTVYKAVMPS-GL-----ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + GL I++ K+L + D K+ RE KL H N+VR
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF------QKLEREARICRKLQHPNIVRL 70
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQ--LLHESTKQPDYRPDWPTRLSIAIG-VAEGLAFLH 726
+ E L+ + + G L + + E + D S I + E +A+ H
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD--------ASHCIQQILESIAYCH 122
Query: 727 HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM 786
I+H ++ N+LL + K ++ L + + AG+ GY+ PE
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 787 QVTAPGNVYSYGVVLLEILTTRLPVEED 814
+ P ++++ GV+L +L P ++
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 70 LSRLQLRGN----ITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV 125
++ L+L GN ++ ++ L+++K LDL++ + P LS L+ L L LN+ +
Sbjct: 87 ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNI 144
Query: 126 IPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPF 176
P L L +L++ +I N + P L +L KL + NK++ P
Sbjct: 145 SP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISPL 191
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSEL 208
++P +L L D Q +NK+ NL NL N++ P + +L
Sbjct: 45 KVPKDLPPDTALLDLQ--NNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 209 ELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDL-- 266
E L L NQL+ +P+ + + L+ L + +N +T + + + +G N L
Sbjct: 103 ERLYLSKNQLKE-LPEKMPKT--LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 267 VGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLI 326
G+ A + L+Y + N++ +P+ S LT L+L N T V L L
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNIT--TIPQGLPPS-LTELHLDGNKITKVDAASLKGLN 216
Query: 327 NLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSL 386
NL +L L NS+ S+ +L +L L+NN+ +P + D +Q + L N++
Sbjct: 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNI 275
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 300 QCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILA-CKNLNKLDLS 358
QCS+L L + + +PP+ L++LQ N+ EI KNL+ L L
Sbjct: 37 QCSDLGLEKVPKD-----LPPDTA-LLDLQ------NNKITEIKDGDFKNLKNLHTLILI 84
Query: 359 NNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLH 404
NN+ + P A + +L+ L L +N LK E+P ++ ++ L++H
Sbjct: 85 NNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVH 129
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 51 CNWKGIDC-DLNQAFVVK---LDLSRLQLRGN-ITLVSE-----LKALKRLDLSNNAFSG 100
C+ + + C DL V K D + L L+ N IT + + LK L L L NN S
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 90
Query: 101 TIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLR 137
P AF L +LE L LS N+ + + +L++LR
Sbjct: 91 ISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELR 127
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 616 GTFSTVYKAVMPS-GL-----ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + GL I++ K+L + D K+ RE KL H N+VR
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF------QKLEREARICRKLQHPNIVRL 70
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQ--LLHESTKQPDYRPDWPTRLSIAIG-VAEGLAFLH 726
+ E L+ + + G L + + E + D S I + E +A+ H
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD--------ASHCIQQILESIAYCH 122
Query: 727 HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM 786
I+H ++ N+LL + K ++ L + + AG+ GY+ PE
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 787 QVTAPGNVYSYGVVLLEILTTRLP 810
+ P ++++ GV+L +L P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 91 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 143
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + +KLL + ++ E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 204 THQSDVWSYGVTVWELMT 221
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSEL 208
++P +L L D Q +NK+ NL NL N++ P + +L
Sbjct: 45 KVPKDLPPDTALLDLQ--NNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 209 ELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDL-- 266
E L L NQL+ +P+ + + L+ L + +N +T + + + +G N L
Sbjct: 103 ERLYLSKNQLKE-LPEKMPKT--LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 267 VGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLI 326
G+ A + L+Y + N++ +P+ S LT L+L N T V L L
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNIT--TIPQGLPPS-LTELHLDGNKITKVDAASLKGLN 216
Query: 327 NLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSL 386
NL +L L NS+ S+ +L +L L+NN+ +P + D +Q + L N++
Sbjct: 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNI 275
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 300 QCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILA-CKNLNKLDLS 358
QCS+L L + + +PP+ L++LQ N+ EI KNL+ L L
Sbjct: 37 QCSDLGLEKVPKD-----LPPDTA-LLDLQ------NNKITEIKDGDFKNLKNLHTLILI 84
Query: 359 NNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLH 404
NN+ + P A + +L+ L L +N LK E+P ++ ++ L++H
Sbjct: 85 NNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVH 129
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 51 CNWKGIDC-DLNQAFVVK---LDLSRLQLRGN-ITLVSE-----LKALKRLDLSNNAFSG 100
C+ + + C DL V K D + L L+ N IT + + LK L L L NN S
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 90
Query: 101 TIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLR 137
P AF L +LE L LS N+ + + +L++LR
Sbjct: 91 ISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELR 127
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 74 TENKLYLVFEFL-SMDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 185
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 186 VDIWSLGCIFAEMVTRR 202
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L H ++V GF D ++ +L +L H+ K +P
Sbjct: 63 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP 121
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + G +LH +IH D+ GN+ L+ D + +G+ ++ ++
Sbjct: 122 EAR-------YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-- 172
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +V+S G ++ +L + P E
Sbjct: 173 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 616 GTFSTVYKAVMPS-GL-----ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + GL I++ K+L + D K+ RE KL H N+VR
Sbjct: 16 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF------QKLEREARICRKLQHPNIVRL 69
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQ--LLHESTKQPDYRPDWPTRLSIAIG-VAEGLAFLH 726
+ E L+ + + G L + + E + D S I + E +A+ H
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD--------ASHCIQQILESIAYCH 121
Query: 727 HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM 786
I+H ++ N+LL + K ++ L + + AG+ GY+ PE
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 787 QVTAPGNVYSYGVVLLEILTTRLP 810
+ P ++++ GV+L +L P
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPP 205
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
I + E + LH + I+H D+ N+LLD D L + S LDP + + V
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVC 184
Query: 773 GSFGYIPPE-YAYTMQVTAPG-----NVYSYGVVLLEILTTRLP 810
G+ Y+ PE +M PG +++S GV++ +L P
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 76 TENKLYLVFEFL-SMDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 130 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 187
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 188 VDIWSLGCIFAEMVTRR 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GL+F H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 20/195 (10%)
Query: 654 ELEKLSKLCHDNLVR----PIGF--VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
E++ + KL H N+V P G + D+ LL Y G L + L++ + +
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-E 121
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEI---EISKLLDPSKG 764
P R ++ ++ L +LH IIH D+ N++L + L+ +I +K LD +
Sbjct: 122 GPIR-TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE- 179
Query: 765 TASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKW 824
+ G+ Y+ PE + T + +S+G + E +T P F V+W
Sbjct: 180 --LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP----FLPNWQPVQW 233
Query: 825 VHGAPARGETPEQIL 839
HG R ++ E I+
Sbjct: 234 -HGK-VREKSNEHIV 246
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 20/195 (10%)
Query: 654 ELEKLSKLCHDNLVR----PIGF--VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
E++ + KL H N+V P G + D+ LL Y G L + L++ + +
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-E 120
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEI---EISKLLDPSKG 764
P R ++ ++ L +LH IIH D+ N++L + L+ +I +K LD +
Sbjct: 121 GPIR-TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE- 178
Query: 765 TASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKW 824
+ G+ Y+ PE + T + +S+G + E +T P F V+W
Sbjct: 179 --LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP----FLPNWQPVQW 232
Query: 825 VHGAPARGETPEQIL 839
HG R ++ E I+
Sbjct: 233 -HGK-VREKSNEHIV 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + S T P P S + +GLAF H ++H
Sbjct: 76 TENKLYLVFEFL-HQDLKTFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 187
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 188 VDIWSLGCIFAEMVTRR 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 616 GTFSTVYKAV-MPSG----LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
G F TVYK + +P G + +++K L+ + T +++ E ++ + + ++ R +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHV 728
G + V L+ +P G L + H+ Y +W + +A+G+ +L
Sbjct: 84 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR 136
Query: 729 AIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQV 788
++H D+++ NVL+ + + +KLL + ++ E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 789 TAPGNVYSYGVVLLEILT 806
T +V+SYGV + E++T
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 30/220 (13%)
Query: 197 EIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELV------ 250
E+PD + LE L L N L +P SI + +L L + ++PE +
Sbjct: 118 ELPDTXQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDAS 176
Query: 251 GHCKSLSNIRIGNNDLVGV--IPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLN 308
G + L N++ + G+ +P +I N+ L + N+ LS + P L L+
Sbjct: 177 GEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235
Query: 309 LASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN 368
L PP G L+ LIL + S +P I L KLDL
Sbjct: 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL----------R 285
Query: 369 AICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSN 408
++SRL SL ++P NC+ L+ H+ +
Sbjct: 286 GCVNLSRLP-------SLIAQLP---ANCIILVPPHLQAQ 315
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 158/392 (40%), Gaps = 52/392 (13%)
Query: 83 SELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGS-LKDLRFFNI 141
S L +L+ LDLS N S S F LS L FL+L N + + L S L L+ +
Sbjct: 71 SSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV 130
Query: 142 SNNVLVGEIP-DELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPD 200
N +I + L LE+ ++ ++ L P + ++ N+ + Q + +
Sbjct: 131 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEI 190
Query: 201 NLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIR 260
+ S +E L L L+ F +L TG+ L+ + N++
Sbjct: 191 FVDVTSSVECLELRDTDLD------TFHFSELS---------TGETNSLIKKF-TFRNVK 234
Query: 261 IGNNDLVGVIPRAIGNVSGLTYFEADNNNLSG---------EIVPEFSQCSNLTLLNLAS 311
I + L V+ + + +SGL E D+ L+G + V + + LT+ L
Sbjct: 235 ITDESLFQVM-KLLNQISGLLELEFDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHI 293
Query: 312 NGFTGVIPPELGQLINLQE---LILYENSLFGEIPKSILA--CKNLNKLDLSNN-RFNGT 365
F + +L L +L E I ENS +P +L+ K+L LDLS N
Sbjct: 294 PRF--YLFYDLSTLYSLTERVKRITVENSKVFLVP-CLLSQHLKSLEYLDLSENLMVEEY 350
Query: 366 IPNAICDMS--RLQYLLLGQNSL-----KGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEI 418
+ N+ C+ + LQ L+L QN L GE + N L + I N PE
Sbjct: 351 LKNSACEDAWPSLQTLILRQNHLASLEKTGETLLTLKN---LTNIDISKNSFHSM--PET 405
Query: 419 GHIRNLQIALNLSFNHLH---GSLPPELGKLD 447
LNLS +H G +P L LD
Sbjct: 406 CQWPEKMKYLNLSSTRIHSVTGCIPKTLEILD 437
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 631 ILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGT 690
IL+ ++++S+D K+ RE++ L H ++++ + ++ Y+ G
Sbjct: 43 ILNRQKIRSLDVV-----GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 691 LAQLL--HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP 748
L + H ++ + R + LS + + H ++H D+ NVLLDA
Sbjct: 98 LFDYICKHGRVEEMEARRLFQQILS-------AVDYCHRHMVVHRDLKPENVLLDAHMNA 150
Query: 749 LLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTT 807
+ + +S ++ + + GS Y PE P +++S GV+L +L
Sbjct: 151 KIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 808 RLPVEED 814
LP +++
Sbjct: 208 TLPFDDE 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLC-HDNLVRPIGFVIYEDVALLLHNYL 686
+ ++VK LK D + ++ E+E + + H N++ +G + ++ Y
Sbjct: 112 EAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 687 PNGTLAQLL-----------HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
G L + L ++ + P+ + + +S +A G+ +L IH D+
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVY 795
++ NVL+ + + + +++ ++ + ++ PE + T +V+
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289
Query: 796 SYGVVLLEILT------TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFG 849
S+GV++ EI T +PVEE F L+K H R + P +
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEELF----KLLKEGH----RMDKPANCTN--------- 332
Query: 850 WRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
E+ ++ C + P++RP K++VE L I
Sbjct: 333 ---ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 180/443 (40%), Gaps = 91/443 (20%)
Query: 64 FVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFG 123
++ K D+S LQ N++L +L+ N +G P AF + + SLN FG
Sbjct: 167 YLSKEDMSSLQQATNLSL----------NLNGNDIAGIEPGAFDSA-----VFQSLN-FG 210
Query: 124 G---------------VIPRELGSLKDLRFFNISNNVLVG--EIPDELKSLEKLEDFQVS 166
G + LG+ +D+ +IS V G E+ E +L+K F +S
Sbjct: 211 GTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270
Query: 167 SNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEG--PIPK 224
SN + L L + + + E+P L +S L+ L L +N+ E I
Sbjct: 271 SNTFH-----CFSGLQELDLTATH----LSELPSGLVGLSTLKKLVLSANKFENLCQISA 321
Query: 225 SIFASGKLEVLVLTQNRLTGDIPEL---VGHCKSLSNIR--------IGNNDLVGVIPRA 273
S F S LT + G+ L G ++L N+R I +D + R
Sbjct: 322 SNFPS-------LTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRN 374
Query: 274 IGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPE---------LGQ 324
+ ++ L + +L E F +C L LL+LA FT + + L +
Sbjct: 375 LSHLQSLNLSYNEPLSLKTE---AFKECPQLELLDLA---FTRLKVKDAQSPFQNLHLLK 428
Query: 325 LINLQELILYENS--LFGEIPKSILACKNLNKLDLSNNRF---NGTIPNAICDMSRLQYL 379
++NL +L +S LF +P L L+L N F N N++ + RL+ L
Sbjct: 429 VLNLSHSLLDISSEQLFDGLPA-------LQHLNLQGNHFPKGNIQKTNSLQTLGRLEIL 481
Query: 380 LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSL 439
+L L H + + + + N LT S + H++ I LNL+ NH+ L
Sbjct: 482 VLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG--IYLNLASNHISIIL 539
Query: 440 PPELGKLDKLVSFDVSNNQLSGT 462
P L L + + ++ N L T
Sbjct: 540 PSLLPILSQQRTINLRQNPLDCT 562
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 715 AIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAV 771
A + GL LH I++ D+ N+LLD G I IS L + +G +I
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDH-----GHIRISDLGLAVHVPEGQ-TIKGR 345
Query: 772 AGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
G+ GY+ PE + T + ++ G +L E++ + P ++
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKDFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLDISSGNVLLDA 744
L G+L QL+ E P+ R +G A EGL +LH I+H D+ + NVLL +
Sbjct: 167 LEGGSLGQLVKEQGCLPE------DRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 220
Query: 745 D-FKPLLGEIEISKLLDP---SKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVV 800
D L + + L P K + + G+ ++ PE A +V+S +
Sbjct: 221 DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 280
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKV 860
+L +L P + F G +K P E P + G RKE + +
Sbjct: 281 MLHMLNGCHPWTQFF-RGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSA 339
Query: 861 ALL 863
A L
Sbjct: 340 AEL 342
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 715 AIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAV 771
A + GL LH I++ D+ N+LLD G I IS L + +G +I
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDH-----GHIRISDLGLAVHVPEGQ-TIKGR 345
Query: 772 AGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
G+ GY+ PE + T + ++ G +L E++ + P ++
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 218
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 28/192 (14%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI-------YEDVAL 680
SGL ++VK+L ++IIH + REL L + H+N++ + + DV L
Sbjct: 75 SGLKIAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYL 133
Query: 681 LLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISS 737
+ H L N Q L + Q + + GL ++H IIH D+
Sbjct: 134 VTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKYIHSADIIHRDLKP 182
Query: 738 GNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT-MQVTAPGNVYS 796
N+ ++ D + + + +++ D ++ + Y PE M +++S
Sbjct: 183 SNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWS 237
Query: 797 YGVVLLEILTTR 808
G ++ E+LT R
Sbjct: 238 VGCIMAELLTGR 249
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + S T P P S + +GLAF H ++H
Sbjct: 75 TENKLYLVFEFL-SMDLKDFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 186
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 187 VDIWSLGCIFAEMVTRR 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 632 LSVKRLKSMDRTIIHHQNKMIRELEKLSKL-CHDNLVRPIGFVIYEDVALLLHNYLPNGT 690
++VK LK ++ + ++ EL+ +++L H+N+V +G L+ Y G
Sbjct: 78 VAVKMLK--EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 691 LAQLL-------------HESTKQPDYRPD-----WPTRLSIAIGVAEGLAFLHHVAIIH 732
L L +E+ K+ + D + L A VA+G+ FL + +H
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 195
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+++ NVL+ + + +++ + ++ PE + T
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 793 NVYSYGVVLLEILT 806
+V+SYG++L EI +
Sbjct: 256 DVWSYGILLWEIFS 269
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 607 MKDSNMIYCGTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDN 665
+KD I G + +V K V PSG I++VKR++S Q M ++ S C
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP-Y 82
Query: 666 LVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
+V+ G + E + + + + D P+ I + + L L
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-EILGKITLATVKALNHL 141
Query: 726 -HHVAIIHLDISSGNVLLDADFKPLLGEIEIS-KLLDPSKGTASISAVAGSFGYIPPEY- 782
++ IIH DI N+LLD L + IS +L+D T AG Y+ PE
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD----AGCRPYMAPERI 197
Query: 783 ---AYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQIL 839
A +V+S G+ L E+ T R P + L + V G P + E+
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE-- 255
Query: 840 DARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVE 880
R + SF + LC +KRPK K++++
Sbjct: 256 --REFSPSF---------INFVNLCLTKDESKRPKYKELLK 285
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT----ASISAVAG 773
V + H ++H DI N+L+D +KL+D G + G
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDL-------RRGCAKLIDFGSGALLHDEPYTDFDG 200
Query: 774 SFGYIPPEYAYTMQVTA-PGNVYSYGVVLLEILTTRLPVEED 814
+ Y PPE+ Q A P V+S G++L +++ +P E D
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + S T P P S + +GLAF H ++H
Sbjct: 76 TENKLYLVFEFL-SMDLKDFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 187
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 188 VDIWSLGCIFAEMVTRR 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
Q ++ RE+ L L H ++++ + +D +++ Y N L + Q D +
Sbjct: 57 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSE 111
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
R + + + H I+H D+ N+LLD + + +S ++
Sbjct: 112 QEARRFFQ-QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---F 167
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVEED 814
+ GS Y PE P +V+S GV+L +L RLP +++
Sbjct: 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 218
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 715 AIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
A + L FLH II+ D+ NVLLD + L + + K + + + G+
Sbjct: 130 AAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGT 187
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
YI PE M + ++ GV+L E+L P E
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 175
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
Q ++ RE+ L L H ++++ + +D +++ Y N L + Q D +
Sbjct: 58 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSE 112
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
R + + + H I+H D+ N+LLD + + +S ++
Sbjct: 113 QEARRFFQ-QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---F 168
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVEED 814
+ GS Y PE P +V+S GV+L +L RLP +++
Sbjct: 169 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ + +
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ ++ + L + + S T P P S + +GLAF H ++H
Sbjct: 76 TENKLYLVFEHV-DQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T V + Y PE + +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTA 187
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 188 VDIWSLGCIFAEMVTRR 204
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 203
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 611 NMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHH-----------QNK----MIREL 655
N+ + GTF+ Y V G + LK DR +NK ++RE+
Sbjct: 13 NLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVA-LLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSI 714
E L KL H N+++ F I ED + + L G +L E K+ + R I
Sbjct: 73 ELLKKLDHPNIMKL--FEILEDSSSFYIVGELYTG--GELFDEIIKRKRFSEHDAAR--I 126
Query: 715 AIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V G+ ++H I+H D+ N+LL++ K +I L + + G+
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV----EEDFGEGVDLVKWVHGAP 829
YI PE +V+S GV+L +L+ P E D + V+ K+ P
Sbjct: 187 AYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 176
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +GL ++VK+L ++IIH + + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGLRVAVKKLSRPFQSIIHAK-RTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D E++I ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNED-----CELKILGFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 218
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 203
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 109/290 (37%), Gaps = 43/290 (14%)
Query: 611 NMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
+I G F VY + + RL ++R RE+ + H+N+V +
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAI---RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 671 GFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAI 730
G + ++ + TL ++ ++ D TR IA + +G+ +LH I
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNK---TR-QIAQEIVKGMGYLHAKGI 151
Query: 731 IHLDISSGNVLLD------ADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H D+ S NV D DF G IS +L + + G ++ PE
Sbjct: 152 LHKDLKSKNVFYDNGKVVITDF----GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 785 TMQ---------VTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETP 835
+ + +V++ G + E+ P + E + W G G P
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA---IIWQMGT---GMKP 261
Query: 836 EQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
LS + G KE+ L L C +RP K+++ML+++
Sbjct: 262 N------LSQIGMG--KEISDIL---LFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 190
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 4/214 (1%)
Query: 182 TNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNR 241
TN R+ +ENQ+ ++ + LE+L L N + + L L L NR
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 242 LTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFE-ADNNNLSGEIVPEFSQ 300
LT + L + + NN + + A + L + + LS F
Sbjct: 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG 183
Query: 301 CSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNN 360
SNL LNLA + P L LI L EL L N L P S +L KL + +
Sbjct: 184 LSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241
Query: 361 RFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEI 394
+ NA ++ L + L N+L +PH++
Sbjct: 242 QIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 37/223 (16%)
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
+N LLNL N + L +L+ L L N + + NLN L+L +NR
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 362 FNGTIPN-AICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGS----NYLTGSIPP 416
TIPN A +S+L+ L L N ++ + L +L +G +Y++
Sbjct: 124 LT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE 182
Query: 417 EIGHIRNLQIALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGML----- 471
+ ++R L +A+ + + P L L KL D+S N LS P + +G++
Sbjct: 183 GLSNLRYLNLAM-CNLREI-----PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236
Query: 472 -------------------SLIEVNFS-NNLLTGPVPSFVPFQ 494
SL+E+N + NNL P F P
Sbjct: 237 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 85 LKALKRLDLSNNAFSGTIPSAFGNLSELEFLDL-SLNKFGGVIPRELGSLKDLRFFNISN 143
L LK L L NN AF + L LDL L + + L +LR+ N++
Sbjct: 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLV---GEIPD 200
L EIP+ L L KL++ +S N L+ P L +L+ ++Q+ D
Sbjct: 195 CNL-REIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFD 252
Query: 201 NLGSVSELEL 210
NL S+ E+ L
Sbjct: 253 NLQSLVEINL 262
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 204
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 191
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 223
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 176
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 190
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 176
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 191
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 191
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 204
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 203
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 203
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLDISSGNVLLDA 744
L G+L QL+ E P+ R +G A EGL +LH I+H D+ + NVLL +
Sbjct: 148 LEGGSLGQLVKEQGCLPE------DRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 201
Query: 745 D-FKPLLGEIEISKLLDP---SKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVV 800
D L + + L P K + + G+ ++ PE A +V+S +
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 261
Query: 801 LLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKV 860
+L +L P + F G +K P E P + G RKE + +
Sbjct: 262 MLHMLNGCHPWTQFF-RGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSA 320
Query: 861 ALL 863
A L
Sbjct: 321 AEL 323
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 198
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 199 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 204
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 204
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISK--LLDPSKGTA 766
P + A +A GL FL II+ D+ NV+LD++ + + + K + D
Sbjct: 442 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD----GV 497
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVD 820
+ G+ YI PE + +++GV+L E+L + P E GE D
Sbjct: 498 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GEDED 548
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 210
Query: 777 ---YIPPEY-AYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 325 LINLQEL-ILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQ 383
L+N EL + + LFG +P +L KL+L N+ G PNA S +Q L LG+
Sbjct: 35 LLNDNELGRISSDGLFGRLP-------HLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87
Query: 384 NSLKGEIPHEIGNCM-----KLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFN 433
N +K EI N M +L L++ N ++ +P H+ +L +LNL+ N
Sbjct: 88 NKIK-----EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL-TSLNLASN 136
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 69 DLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPR 128
+L R+ G L L L +L+L N +G P+AF S ++ L L NK + +
Sbjct: 40 ELGRISSDG---LFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 129 ELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLN 171
L L+ N+ +N + +P + L L ++SN N
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 130 LGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNG-SIPFWVGNLTNLRVFT 188
G L L + N L G P+ + +++ Q+ NK+ S ++G L L+
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG-LHQLKTLN 108
Query: 189 AYENQLVGEIPDNLGSVSELELLNLHSN 216
Y+NQ+ +P + ++ L LNL SN
Sbjct: 109 LYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 287 NNNLSGEIVPE--FSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPK 344
N+N G I + F + +L L L N TG+ P ++QEL L EN + K
Sbjct: 37 NDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 345 SILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQN 384
L L L+L +N+ + +P + ++ L L L N
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 209 ELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVG 268
EL + S+ L G +P + KLE L +N+LTG P + +++G N +
Sbjct: 40 ELGRISSDGLFGRLPHLV----KLE---LKRNQLTGIEPNAFEGASHIQELQLGENKIKE 92
Query: 269 VIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGF 314
+ + + L +N +S + F ++LT LNLASN F
Sbjct: 93 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 616 GTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV------R 668
G + V A P+G I+++K+++ D+ + + +RE++ L H+N++ R
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLF--ALRTLREIKILKHFKHENIITIFNIQR 79
Query: 669 PIGFVIYEDVAL---LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
P F + +V + L+ L Q+L + Q + L
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ-----------YFIYQTLRAVKVL 128
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLD--------PSKGTASISAVAGSFGY 777
H +IH D+ N+L++++ + + +++++D P+ + ++ + Y
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTR 808
PE T + + +V+S G +L E+ R
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++ +++ +D + IRE+ L +L H N+V+ + +
Sbjct: 14 GTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 73 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 184
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 185 VDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ VYKA +G ++++ +++ +D + IRE+ L +L H N+V+ + +
Sbjct: 13 GTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 675 YEDVALLLHNYLPNGTLAQLLHES--TKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ L+ +L + L + + S T P P S + +GLAF H ++H
Sbjct: 72 TENKLYLVFEFL-HQDLKKFMDASALTGIP-----LPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG 792
D+ N+L++ + L + +++ T + V + Y PE + +
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTA 183
Query: 793 -NVYSYGVVLLEILTTR 808
+++S G + E++T R
Sbjct: 184 VDIWSLGCIFAEMVTRR 200
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D E++I ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNED-----CELKILDFYLARHTDDEMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 616 GTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV------R 668
G + V A P+G I+++K+++ D+ + + +RE++ L H+N++ R
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLF--ALRTLREIKILKHFKHENIITIFNIQR 79
Query: 669 PIGFVIYEDVAL---LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
P F + +V + L+ L Q+L + Q + L
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ-----------YFIYQTLRAVKVL 128
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLD--------PSKGTASISAVAGSFGY 777
H +IH D+ N+L++++ + + +++++D P+ + ++ + Y
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTR 808
PE T + + +V+S G +L E+ R
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
Q ++ RE+ L L H ++++ + +D +++ Y N L + Q D +
Sbjct: 52 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSE 106
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
R + + + H I+H D+ N+LLD + + +S ++ + G
Sbjct: 107 QEARRFFQ-QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNF- 162
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVEED 814
+ GS Y PE P +V+S GV+L +L RLP +++
Sbjct: 163 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
Q ++ RE+ L L H ++++ + +D +++ Y N L + Q D +
Sbjct: 48 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSE 102
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
R + + + H I+H D+ N+LLD + + +S ++ + G
Sbjct: 103 QEARRFFQ-QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNF- 158
Query: 768 ISAVAGSFGYIPPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVEED 814
+ GS Y PE P +V+S GV+L +L RLP +++
Sbjct: 159 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT--- 765
P + A +A GL FL II+ D+ NV+LD++ G I+I+ +
Sbjct: 121 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKENIWDG 175
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +++GV+L E+L + P E
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 235 LVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAI--GNVSGLTYFEADNNNLSG 292
L TQN T + + K L + + N L A+ N+S L + N+L+
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417
Query: 293 EIVPE-FSQCSNLTLLNLASNGFTG----VIPPELGQLINLQELILYENSLFGEIPKSIL 347
+ ++ +LNL+SN TG +PP++ + L L+ N + IPK +
Sbjct: 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKV------KVLDLHNNRIMS-IPKDVT 470
Query: 348 ACKNLNKLDLSNNRFNGTIPNAICD-MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIG 406
+ L +L++++N+ ++P+ + D ++ LQY+ L N P G
Sbjct: 471 HLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP--------------G 515
Query: 407 SNYLTGSIPPEIGHIRN 423
YL+ I G +RN
Sbjct: 516 IRYLSEWINKHSGVVRN 532
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 72/187 (38%), Gaps = 39/187 (20%)
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKN---LNKLDLS 358
S+ T LN N FT + L LQ LIL N L K L KN L LD+S
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL-KNFFKVALMTKNMSSLETLDVS 411
Query: 359 NNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSI---- 414
N N + C + +L L++ SN LTGS+
Sbjct: 412 LNSLNSHAYDRTCAWAE-----------------------SILVLNLSSNMLTGSVFRCL 448
Query: 415 PPEIGHIRNLQIALNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLI 474
PP++ L+L N + S+P ++ L L +V++NQL + SL
Sbjct: 449 PPKVK-------VLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQ 500
Query: 475 EVNFSNN 481
+ +N
Sbjct: 501 YIWLHDN 507
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 26/135 (19%)
Query: 83 SELKALKRLDLSNNAFSGTIPSAF--GNLSELEFLDLSLNKFGG-VIPRELGSLKDLRFF 139
S LK L+ L L N A N+S LE LD+SLN R + +
Sbjct: 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433
Query: 140 NISNNVLVGE---------------------IPDELKSLEKLEDFQVSSNKLNGSIPFWV 178
N+S+N+L G IP ++ L+ L++ V+SN+L S+P V
Sbjct: 434 NLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQL-KSVPDGV 492
Query: 179 -GNLTNLRVFTAYEN 192
LT+L+ ++N
Sbjct: 493 FDRLTSLQYIWLHDN 507
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 68 LDLSRLQLRGNITLVSELKALKRLDLSNNAFSG-TIPSAFGNLSELEFLDLSLNKF 122
LD+S +L+ NI+ + +L+ LDLS N F + FGNL++L FL LS KF
Sbjct: 105 LDVSHNRLQ-NIS-CCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF 158
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
++LDL + + + F L++L +L+L N+ + L +L ++NN L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWV-GNLTNLRVFTAYENQLVGEIPDNLGSVSE 207
L +L+ + N+L S+P V LT L+ NQL ++
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 208 LELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRL 242
L+ L+L +NQL+ +P F GKL+ + L N+
Sbjct: 157 LQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 205 VSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGN 263
+++L LNL NQL+ + +F +L L L N+L + H L + +G
Sbjct: 58 LTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 264 NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELG 323
N L + ++ L + N L F + +NL L+L++N V
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 324 QLINLQELILYENSL 338
+L LQ + L+ N
Sbjct: 177 RLGKLQTITLFGNQF 191
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 91 LDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEI 150
LDL N+ F L+ L L L NK + L L + N+S N L
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLP 92
Query: 151 PDELKSLEKLEDFQVSSNKLNGSIPFWV-GNLTNLRVFTAYENQLVGEIPDNL-GSVSEL 208
L +L++ +++N+L S+P V LT L+ Y+NQL +PD + ++ L
Sbjct: 93 NGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSL 150
Query: 209 ELLNLHSNQLEGPIP 223
+ + LH N + P
Sbjct: 151 QYIWLHDNPWDCTCP 165
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 84 ELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISN 143
EL +L +L L N F L+ L +L+LS N+ + L L+ ++
Sbjct: 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109
Query: 144 NVLVGEIPDEL-KSLEKLEDFQVSSNKLNGSIPFWV-GNLTNLRVFTAYENQLVGEIPDN 201
N L +PD + L +L+D ++ N+L S+P V LT+L+ ++N P
Sbjct: 110 NQL-QSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP-- 165
Query: 202 LGSVSELELLNLHS 215
G E +N HS
Sbjct: 166 -GIRYLSEWINKHS 178
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 255 SLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGF 314
SL+ + +G N L + ++ LTY N L F + + L L L +N
Sbjct: 53 SLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL 112
Query: 315 TGVIPPELGQLINLQELILYENSLFGEIPKSIL-ACKNLNKLDLSNNRFNGTIP 367
+ +L L++L LY+N L +P + +L + L +N ++ T P
Sbjct: 113 QSLPDGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNK---MIRELEKLSKLCHDNLVRPIG 671
G TVY A+ + +G ++++++ + Q K +I E+ + + + N+V +
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
+ D ++ YL G+L ++ E+ D ++ + L FLH +I
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCM------DEGQIAAVCRECLQALEFLHSNQVI 139
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H +I S N+LL D L + + P + + S + G+ ++ PE
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 792 GNVYSYGVVLLEILTTRLP 810
+++S G++ +E++ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
++LDL + + + F L++L +L+L N+ + L +L ++NN L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWV-GNLTNLRVFTAYENQLVGEIPDNLGSVSE 207
L +L+ + N+L S+P V LT L+ NQL ++
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 208 LELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRL 242
L+ L+L +NQL+ +P F GKL+ + L N+
Sbjct: 157 LQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 205 VSELELLNLHSNQLEGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGN 263
+++L LNL NQL+ + +F +L L L N+L + H L + +G
Sbjct: 58 LTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 264 NDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELG 323
N L + ++ L + N L F + +NL L+L++N V
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 324 QLINLQELILYENSL 338
+L LQ + L+ N
Sbjct: 177 RLGKLQTITLFGNQF 191
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAGFVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG--- 671
GT+ VYKA +G ++++K+++ +D + IRE+ L +L H N+V+ +
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 672 -----FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLH 726
++++E V L ++ L + P S + +GLAF H
Sbjct: 72 TENKLYLVFEHVHQDLKTFMDASALTGI------------PLPLIKSYLFQLLQGLAFCH 119
Query: 727 HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM 786
++H D+ N+L++ + L + +++ T + V + Y PE
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGC 177
Query: 787 QVTAPG-NVYSYGVVLLEILTTR 808
+ + +++S G + E++T R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAGFVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 39 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 91
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 92 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 140
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 195
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ TV+KA + I+++KR++ +D + +RE+ L +L H N+VR + V+
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKNIVR-LHDVL 70
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
+ D L L + L + D P+ S + +GL F H ++H D
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFDSCNG--DLDPE--IVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPG-N 793
+ N+L++ + + L + +++ SA + Y PP+ + ++ + +
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 794 VYSYGVVLLEILTTRLPV 811
++S G + E+ P+
Sbjct: 185 MWSAGCIFAELANAARPL 202
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 25/268 (9%)
Query: 628 SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVA-----LLL 682
+ L ++VK +K +D + + + E + H N++R +G I +++
Sbjct: 61 TSLKVAVKTMK-LDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI 119
Query: 683 HNYLPNGTLAQLLHESTKQ--PDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNV 740
++ G L L S + P + P T L + +A G+ +L + +H D+++ N
Sbjct: 120 LPFMKYGDLHTYLLYSRLETGPKHIP-LQTLLKFMVDIALGMEYLSNRNFLHRDLAARNC 178
Query: 741 LLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVV 800
+L D + + +SK + +I E T+ +V+++GV
Sbjct: 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 801 LLEILT---TRLPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSFGWRKEMLTA 857
+ EI T T P ++ E D + +HG R + PE LD + WR + L
Sbjct: 239 MWEIATRGMTPYPGVQNH-EMYDYL--LHG--HRLKQPEDCLDELYEIMYSCWRTDPLDR 293
Query: 858 LKVALLCTDSTPAKRPKMKKVVEMLQEI 885
++L R +++K++E L ++
Sbjct: 294 PTFSVL--------RLQLEKLLESLPDV 313
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 58 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 110
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 111 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 159
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 214
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 49 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 101
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 102 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 150
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 205
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 59 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 111
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 160
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 215
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 35 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 87
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 136
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMAGFVATRWYRAPEIML 191
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 35 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 87
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 88 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 136
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 191
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 25/181 (13%)
Query: 632 LSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTL 691
++VKR+ + + +++RE ++ H N++R F +D Y+
Sbjct: 51 VAVKRILPECFSFADREVQLLRESDE-----HPNVIR--YFCTEKDRQF---QYIAIELC 100
Query: 692 AQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLD-----ADF 746
A L E +Q D+ +++ GLA LH + I+H D+ N+L+
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160
Query: 747 KPLLGEIEISKLLDPSKGTAS-ISAVAGSFGYIPPEY---------AYTMQVTAPGNVYS 796
K ++ + + K L + + S S V G+ G+I PE YT+ + + G V+
Sbjct: 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220
Query: 797 Y 797
Y
Sbjct: 221 Y 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 28/173 (16%)
Query: 681 LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNV 740
L+ +Y G L LL +K D P+ R +A V + +H + +H DI N+
Sbjct: 151 LVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVI-AIDSVHQLHYVHRDIKPDNI 206
Query: 741 LLD-------ADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQ-----V 788
L+D ADF L +E GT S G+ YI PE M+
Sbjct: 207 LMDMNGHIRLADFGSCLKLME--------DGTVQSSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 789 TAPGNVYSYGVVLLEILTTRLPVEEDFGEG-VDLVKWVHGAPARGETPEQILD 840
+ +S GV + E+L P + E V+ + R + P Q+ D
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPF---YAESLVETYGKIMNHKERFQFPTQVTD 308
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
+ + H I+H D+ N+LLD + + + +S ++ + G + GS Y P
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNF-LKTSCGSPNYAAP 176
Query: 781 EYAYTMQVTAPG-NVYSYGVVLLEILTTRLPVEEDF 815
E P +V+S G+VL +L RLP +++F
Sbjct: 177 EVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 28/296 (9%)
Query: 606 TMKDSNMIY----CGTFSTVYKAVMP------SGLILSVKRLKSMDRTIIHHQNKMIREL 655
+M D +Y G FS V + V + I++ K+L + D HQ K+ RE
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD-----HQ-KLEREA 54
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIA 715
L H N+VR + E L+ + + G L E +Y + I
Sbjct: 55 RICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQ 110
Query: 716 IGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGS 774
+ E + H + ++H D+ N+LL + K ++ L +G + AG+
Sbjct: 111 -QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV-EEDFGEGVDLVK---WVHGAPA 830
GY+ PE P ++++ GV+L +L P +ED + +K + +P
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 229
Query: 831 RGE-TPE-QILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQE 884
TPE + L ++ T++ R ALK +C ST A ++ VE L++
Sbjct: 230 WDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKK 285
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 28/202 (13%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 35 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 87
Query: 675 -------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ DV L+ H L L ++ + D+ + + GL ++H
Sbjct: 88 PARSLEEFNDVYLVTH--LMGADLNNIVKCAKLTDDHVQ------FLIYQILRGLKYIHS 139
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT-M 786
IIH D+ N+ ++ D + + + +++ D ++ + Y PE M
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWM 194
Query: 787 QVTAPGNVYSYGVVLLEILTTR 808
+++S G ++ E+LT R
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 89/212 (41%), Gaps = 32/212 (15%)
Query: 616 GTFSTVYKAVM-PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV------R 668
G + V A P+G I+++K+++ D+ + + +RE++ L H+N++ R
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLF--ALRTLREIKILKHFKHENIITIFNIQR 79
Query: 669 PIGFVIYEDVAL---LLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
P F + +V + L+ L Q+L + Q + L
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ-----------YFIYQTLRAVKVL 128
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLD--------PSKGTASISAVAGSFGY 777
H +IH D+ N+L++++ + + +++++D P+ + + + Y
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTR 808
PE T + + +V+S G +L E+ R
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 78 NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLR 137
+I+ + EL L L L+ N F L+ L+ L L N+ + L +L
Sbjct: 77 DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136
Query: 138 FFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWV-GNLTNLRVFTAYENQLVG 196
+ N+++N L L L + +S N+L S+P V LT L+ Y+NQL
Sbjct: 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQL-K 194
Query: 197 EIPDNL-GSVSELELLNLHSNQLEGPIP 223
+PD + ++ L+ + LH N + P
Sbjct: 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 42/205 (20%)
Query: 255 SLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGF 314
S+ I N+D+ V + I + + Y N L + + +NLT L L N
Sbjct: 42 SIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGNQL 97
Query: 315 TGVIPPELGQLINLQELILYENSL-----------------------FGEIPKSIL-ACK 350
+ +L NL+EL+L EN L +PK +
Sbjct: 98 QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLT 157
Query: 351 NLNKLDLSNNRFNGTIPNAICD-MSRLQYLLLGQNSLKGEIPHEIGNCMKLLQ---LHI- 405
NL +LDLS N+ ++P + D +++L+ L L QN LK +P + + + LQ LH
Sbjct: 158 NLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN 215
Query: 406 -------GSNYLTGSIPPEIGHIRN 423
G YL+ I G +RN
Sbjct: 216 PWDCTCPGIRYLSEWINKHSGVVRN 240
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 232 LEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLS 291
L L+LT N+L + +L + + N L + ++ LTY +N L
Sbjct: 87 LTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ 146
Query: 292 GEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSIL-ACK 350
F + +NLT L+L+ N + +L L++L LY+N L +P +
Sbjct: 147 SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLT 205
Query: 351 NLNKLDLSNNRFNGTIP 367
+L + L +N ++ T P
Sbjct: 206 SLQYIWLHDNPWDCTCP 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 31/249 (12%)
Query: 579 SQPSIIAGNVLVENLR----QAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMP-SGLILS 633
++P+ A +V +NL ++ D+ V + I G + V A +G ++
Sbjct: 25 AEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVA 84
Query: 634 VKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLV------RP-IGFVIYEDVALLLHNYL 686
+K++ + ++ + + +REL+ L HDN++ RP + + ++ V ++L L
Sbjct: 85 IKKIPNA-FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD--L 141
Query: 687 PNGTLAQLLHESTKQPDYRPDWPTRLS----IAIGVAEGLAFLHHVAIIHLDISSGNVLL 742
L Q++H S P L + GL ++H +IH D+ N+L+
Sbjct: 142 MESDLHQIIHSSQ---------PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 192
Query: 743 DADFKPLLGEIEISKLL--DPSKGTASISAVAGSFGYIPPEYAYTM-QVTAPGNVYSYGV 799
+ + + +G+ +++ L P++ ++ + Y PE ++ + T +++S G
Sbjct: 193 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC 252
Query: 800 VLLEILTTR 808
+ E+L R
Sbjct: 253 IFGEMLARR 261
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N V+P+ V + + Y N TL L+H W + + E L++
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEALSY 131
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS------------KGTASISAVA 772
+H IIH D+ N+ +D +G+ ++K + S + ++++
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 773 GSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPAR 831
G+ Y+ E T ++YS G++ E++ P E V+++K +
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM-ERVNILKKLRSVSI- 246
Query: 832 GETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRP 873
E P D + M K+ L D P KRP
Sbjct: 247 -EFPPDFDDNK-----------MKVEKKIIRLLIDHDPNKRP 276
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 33/251 (13%)
Query: 578 SSQPSIIAGNVLVENLR----QAIDLDAVVKATMKDSNMIYCGTFSTVYKAVMP-SGLIL 632
++P+ A +V +NL ++ D+ V + I G + V A +G +
Sbjct: 23 KAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQV 82
Query: 633 SVKRL-KSMDRTIIHHQNKMIRELEKLSKLCHDNLV------RP-IGFVIYEDVALLLHN 684
++K++ + D ++ + + +REL+ L HDN++ RP + + ++ V ++L
Sbjct: 83 AIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD- 139
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLS----IAIGVAEGLAFLHHVAIIHLDISSGNV 740
L L Q++H S P L + GL ++H +IH D+ N+
Sbjct: 140 -LMESDLHQIIHSSQ---------PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 189
Query: 741 LLDADFKPLLGEIEISKLL--DPSKGTASISAVAGSFGYIPPEYAYTM-QVTAPGNVYSY 797
L++ + + +G+ +++ L P++ ++ + Y PE ++ + T +++S
Sbjct: 190 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249
Query: 798 GVVLLEILTTR 808
G + E+L R
Sbjct: 250 GCIFGEMLARR 260
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
++ V + LA+LH +IH DI S ++LL D + L + + SK +
Sbjct: 145 TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI--SKDVPKRKXLV 202
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
G+ ++ PE +++S G++++E++ P D
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 45 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 97
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 98 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 146
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D ++ + Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIML 201
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
GT+ TV+KA + I+++KR++ +D + +RE+ L +L H N+VR + V+
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKNIVR-LHDVL 70
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
+ D L L + L + D P+ S + +GL F H ++H D
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFDSCNG--DLDPE--IVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 735 ISSGNVLLDADFKPLLGEIEISKL-LDPSKG--TASISAVAGSFGYIPPEYAYTMQVTAP 791
+ N+L++ + GE++++ L + G SA + Y PP+ + ++ +
Sbjct: 127 LKPQNLLINRN-----GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 792 G-NVYSYGVVLLEILTTRLPV 811
+++S G + E+ P+
Sbjct: 182 SIDMWSAGCIFAELANAGRPL 202
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Query: 649 NKMIRELEKLSKLCHDNLV------RPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQP 702
+ +RE++ L + H+N++ R +DV L+ H L L +LL
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH--LMGADLYKLLKTQHLSN 143
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
D+ + GL ++H ++H D+ N+LL+ + + ++++ DP
Sbjct: 144 DHI------CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
Query: 763 KG-TASISAVAGSFGYIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
T ++ + Y PE + T +++S G +L E+L+ R
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 615 CGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
C F T +G ++VK+L ++IIH + REL L + H+N++ +
Sbjct: 59 CAAFDT------KTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDVFT 111
Query: 675 -------YEDVALLLH---NYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
+ DV L+ H L N Q L + Q + + GL +
Sbjct: 112 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----------FLIYQILRGLKY 160
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAY 784
+H IIH D+ N+ ++ D + + + +++ D + + Y PE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMXGXVATRWYRAPEIML 215
Query: 785 T-MQVTAPGNVYSYGVVLLEILTTR 808
M +++S G ++ E+LT R
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 24/283 (8%)
Query: 616 GTFSTVYKAVMPS------GLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + I++ K+L + D HQ K+ RE L H N+VR
Sbjct: 42 GAFSVVRRCVKKTPTQEYAAKIINTKKLSARD-----HQ-KLEREARICRLLKHPNIVRL 95
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
+ E L+ + + G L E +Y + I + E + +H
Sbjct: 96 HDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIH-QILESVNHIHQHD 150
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFGYIPPEYAYTMQV 788
I+H D+ N+LL + K ++ L +G + AG+ GY+ PE
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 789 TAPGNVYSYGVVLLEILTTRLPV-EEDFGEGVDLVK---WVHGAPARGE-TPE-QILDAR 842
P ++++ GV+L +L P +ED + +K + +P TPE + L +
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 843 LSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
+ T++ R ALK +C ST A ++ VE L++
Sbjct: 271 MLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKF 313
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L + ++V GF +D ++ +L +L H+ K +P
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP 142
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + R +I +G+ +LH+ +IH D+ GN+ L+ D +G+ ++ ++
Sbjct: 143 EAR--YFMRQTI-----QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-- 193
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +++S G +L +L + P E
Sbjct: 194 FDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L + ++V GF +D ++ +L +L H+ K +P
Sbjct: 68 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP 126
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + R +I +G+ +LH+ +IH D+ GN+ L+ D +G+ ++ ++
Sbjct: 127 EAR--YFMRQTI-----QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-- 177
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +++S G +L +L + P E
Sbjct: 178 FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 119 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKXFCGT 173
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 606 TMKDSNMIYCGTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHD 664
T+ + ++ G F V+K +GL L+ K +K+ + + ++ E+ +++L H
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHA 146
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTL-AQLLHESTKQPDYRPDWPTRLSIAIGVAEGLA 723
NL++ ++ +L+ Y+ G L +++ ES Y + + EG+
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES-----YNLTELDTILFMKQICEGIR 201
Query: 724 FLHHVAIIHLDISSGNVL-LDADFKPL-LGEIEISKLLDPSKGTASISAVAGSFGYIPPE 781
+H + I+HLD+ N+L ++ D K + + + +++ P + + G+ ++ PE
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPE 258
Query: 782 YAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
V+ P +++S GV+ +L+ P
Sbjct: 259 VVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 117 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKTFCGT 171
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
Query: 697 ESTKQPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLL-DADFKPLLGE-- 752
E K+ +++P P +A + L FLH + H D+ N+L +++F+ L E
Sbjct: 119 EFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK 178
Query: 753 -----------IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVL 801
I ++ + + + + Y PPE + P +V+S G +L
Sbjct: 179 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 238
Query: 802 LE 803
E
Sbjct: 239 FE 240
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 14/162 (8%)
Query: 650 KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP 709
K ++E L + H N+VR IG + ++ + G L + +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK---- 213
Query: 710 TRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS 769
T L + A G+ +L IH D+++ N L+ ++IS + +
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK-----NVLKISDFGMSREEADGVX 268
Query: 770 AVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A +G +P PE + ++ +V+S+G++L E +
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 65/280 (23%)
Query: 84 ELKALKRLDLSNN----AFSGTIPSAFGNLSELEFLDLSLN--KFGGVIPRELGSLKDLR 137
+LK+LKRL ++N AFS +L LEFLDLS N F G + L+
Sbjct: 323 KLKSLKRLTFTSNKGGNAFSEV------DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 138 FFNISNNVLVGEIPDELKSLEKLE--DFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLV 195
+ ++S N ++ + LE+LE DFQ S+ K ++ VF + N +
Sbjct: 377 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK----------QMSEFSVFLSLRNLIY 425
Query: 196 GEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGD-IPELVGHCK 254
+I V+ + N LEVL + N + +P++ +
Sbjct: 426 LDISHTHTRVAFNGIFN---------------GLSSLEVLKMAGNSFQENFLPDIFTELR 470
Query: 255 SLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGF 314
+L+ + + L + P A F+ S+L +LN+ASN
Sbjct: 471 NLTFLDLSQCQLEQLSPTA------------------------FNSLSSLQVLNMASNQL 506
Query: 315 TGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNK 354
V +L +LQ++ L+ N P+ + LNK
Sbjct: 507 KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 546
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 71 SRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFG-GVIPRE 129
S L+ ++ L+ L LD+S+ F LS LE L ++ N F +P
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 130 LGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIP 175
L++L F ++S L P SL L+ ++SN+L S+P
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVP 510
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 183/464 (39%), Gaps = 62/464 (13%)
Query: 68 LDLSRLQLRG-NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVI 126
LDLSR +++ L L L L+ N AF LS L+ L +
Sbjct: 57 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116
Query: 127 PRELGSLKDLRFFNISNNVLVG-EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLR 185
+G LK L+ N+++N++ ++P+ +L LE +SSNK+ T+LR
Sbjct: 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY------CTDLR 170
Query: 186 VF----TAYENQLVGEIPDNL---GSVSELEL--LNLHSNQLEGPIPKSI---FASGKLE 233
V + + P N G+ E+ L L L +N + K+ A ++
Sbjct: 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVH 230
Query: 234 VLVLTQNRLTGDIPE-----LVGHCK-SLSNIRIGNND--------------------LV 267
LVL + R G++ + L G C ++ R+ D LV
Sbjct: 231 RLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290
Query: 268 GVIPRAIGNVS---GLTYFEADNNNLSGEIVPEFSQCSNLTLL-NLASNGFTGVIPPELG 323
V + + S G + E N + LT N N F+ V P L
Sbjct: 291 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSL- 349
Query: 324 QLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNG--TIPNAICDMSRLQYLLL 381
+ ++L L S G +S +L LDLS FNG T+ + + +L++L
Sbjct: 350 EFLDLSRNGL---SFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDF 403
Query: 382 GQNSLKGEIPHEIGNCMK-LLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLP 440
++LK + ++ L+ L I + + + +L++ L ++ N +
Sbjct: 404 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENFL 462
Query: 441 PEL-GKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLL 483
P++ +L L D+S QL P+A + SL +N ++N L
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 31 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSVSE 207
L L+ L F +G+L L+ N + ++P+ +++
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 150
Query: 208 LELLNLHSNQLEG 220
LE L+L SN+++
Sbjct: 151 LEHLDLSSNKIQS 163
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 202 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 202 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L + ++V GF +D ++ +L +L H+ K +P
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP 142
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + R +I +G+ +LH+ +IH D+ GN+ L+ D +G+ ++ ++
Sbjct: 143 EAR--YFMRQTI-----QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-- 193
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +++S G +L +L + P E
Sbjct: 194 FDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 211 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
Query: 697 ESTKQPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLL-DADFKPLLGE-- 752
E K+ +++P P +A + L FLH + H D+ N+L +++F+ L E
Sbjct: 110 EFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK 169
Query: 753 -----------IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVL 801
I ++ + + + + Y PPE + P +V+S G +L
Sbjct: 170 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 229
Query: 802 LE 803
E
Sbjct: 230 FE 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 650 KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP 709
+++RE+ L++L HD++V+ + VI +DV Y+ + ++ K+ P +
Sbjct: 98 RILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV----VLEIADSDFKKLFRTPVYL 153
Query: 710 TRLSIAI---GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLD-PSKGT 765
T L I + G+ ++H I+H D+ N L++ D + + +++ +D P G
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
Query: 766 AS--ISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDL 821
+ IS + + ++ G+V + E++ ++E++ E +D+
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL----LQENYTEAIDV 267
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 10/140 (7%)
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ L+ +Y G L LL +K D P+ R I V + +H + +H DI
Sbjct: 162 ENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGEMVL-AIDSIHQLHYVHRDI 217
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQ-----VTA 790
NVLLD + L + S L GT S G+ YI PE M+
Sbjct: 218 KPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 276
Query: 791 PGNVYSYGVVLLEILTTRLP 810
+ +S GV + E+L P
Sbjct: 277 ECDWWSLGVCMYEMLYGETP 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 211 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 175
Query: 777 ---YIPPEYA-YTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT---ASISAVAGS 774
+ L +LH +++ DI N++LD D G I+I+ +G A++ G+
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
Y+ PE + + GVV+ E++ RLP
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 171
Query: 777 ---YIPPEYA-YTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 174
Query: 777 ---YIPPEYA-YTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 171
Query: 777 ---YIPPEYA-YTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHD-NLVRPIGFV 673
GT+ VYK + +G + ++K MD T + ++ +E+ L K H N+ G
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIK---VMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 674 I------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
I +D L+ + G++ L+ ++TK + +W I + GL+ LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLI-KNTKGNTLKEEWIA--YICREILRGLSHLHQ 147
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPE 781
+IH DI NVLL + + L + +S LD + G + G+ ++ PE
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR--NTFIGTPYWMAPE 199
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 201 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 261 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
Query: 697 ESTKQPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLL-DADFKPLLGE-- 752
E K+ +++P P +A + L FLH + H D+ N+L +++F+ L E
Sbjct: 142 EFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK 201
Query: 753 -----------IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVL 801
I ++ + + + + Y PPE + P +V+S G +L
Sbjct: 202 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 261
Query: 802 LE 803
E
Sbjct: 262 FE 263
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFG- 776
V E + H+ ++H DI N+L+D + GE+ KL+D G V F
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLN----RGEL---KLIDFGSGALLKDTVYTDFDG 171
Query: 777 ---YIPPEYA-YTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
Y PPE+ Y V+S G++L +++ +P E D
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 211 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 256 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 203 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 263 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 194 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 254 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 202 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
L +L + IIH D+ N+LLD + + I+ +L P + I+ +AG+ Y+ P
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRE--TQITTMAGTKPYMAP 183
Query: 781 EYAYTMQ---VTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGAPARGETPEQ 837
E + + + + +S GV E+L R P + + + E
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH------------IRSSTSSKEIV-H 230
Query: 838 ILDARLSTVSFGWRKEMLTALKVAL 862
+ + T W +EM++ LK L
Sbjct: 231 TFETTVVTYPSAWSQEMVSLLKKLL 255
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 202 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 13/149 (8%)
Query: 672 FVIYEDVALL--LHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
F ++D L + Y+P G L L+ D W + + +A L +H +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLA--LDAIHSMG 194
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM--- 786
+IH D+ N+LLD L + +D + G G+ YI PE +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET-GMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 787 -QVTAPGNVYSYGVVLLEILTTRLPVEED 814
+ +S GV L E+L P D
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 10/140 (7%)
Query: 676 EDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDI 735
E+ L+ +Y G L LL +K D P+ R I V + +H + +H DI
Sbjct: 146 ENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGEMVL-AIDSIHQLHYVHRDI 201
Query: 736 SSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQ-----VTA 790
NVLLD + L + S L GT S G+ YI PE M+
Sbjct: 202 KPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 260
Query: 791 PGNVYSYGVVLLEILTTRLP 810
+ +S GV + E+L P
Sbjct: 261 ECDWWSLGVCMYEMLYGETP 280
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 211 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 213 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 646 HHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTK---QP 702
H + KM E+ L + ++V GF +D ++ +L +L H+ K +P
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP 142
Query: 703 DYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS 762
+ R + R +I +G+ +LH+ +IH D+ GN+ L+ D +G+ ++ ++
Sbjct: 143 EAR--YFMRQTI-----QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-- 193
Query: 763 KGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
+ G+ YI PE + +++S G +L +L + P E
Sbjct: 194 FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 14/162 (8%)
Query: 650 KMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWP 709
K ++E L + H N+VR IG + ++ + G L + +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK---- 213
Query: 710 TRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS 769
T L + A G+ +L IH D+++ N L+ ++IS + +
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK-----NVLKISDFGMSREEADGVY 268
Query: 770 AVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A +G +P PE + ++ +V+S+G++L E +
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ G L + K P+ + S I +A L +LH II+ D+ NVLLD+
Sbjct: 102 YVNGGDLMFHMQRQRKLPEEHARF---YSAEISLA--LNYLHERGIIYRDLKLDNVLLDS 156
Query: 745 DFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLE 803
+ L + + K L P T S G+ YI PE + ++ GV++ E
Sbjct: 157 EGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 213
Query: 804 ILTTRLPVE 812
++ R P +
Sbjct: 214 MMAGRSPFD 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 248 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 616 GTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHH--QNKMIRELEKLSKLCHDNLVRPIGF 672
G F+TVYKA + I+++K++K R+ +RE++ L +L H N++ +
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRL-SIAIGVAEGLAFLHHVAII 731
++ L+ +++ + S P+ + + + +GL +LH I+
Sbjct: 81 FGHKSNISLVFDFMETDLEVIIKDNSLVLT------PSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H D+ N+LLD + L + ++K S A V + Y PE + ++
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRW-YRAPELLFGARMYGV 192
Query: 792 G-NVYSYGVVLLEIL--TTRLPVEEDFGEGVDLVKWVHGAPARGETPE 836
G ++++ G +L E+L LP + D + + + + G P + P+
Sbjct: 193 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL-GTPTEEQWPD 239
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLDISSGNVLLDA 744
L G+L QL+ + P+ R +G A EGL +LH I+H D+ + NVLL +
Sbjct: 146 LEGGSLGQLIKQMGCLPE------DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 199
Query: 745 D-FKPLLGEIEISKLLDP---SKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVV 800
D + L + + L P K + + G+ ++ PE A +++S +
Sbjct: 200 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 259
Query: 801 LLEILTTRLPVEEDF 815
+L +L P + F
Sbjct: 260 MLHMLNGCHPWTQYF 274
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 685 YLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA 744
Y+ G L + K P+ + S I +A L +LH II+ D+ NVLLD+
Sbjct: 134 YVNGGDLMFHMQRQRKLPEEHARF---YSAEISLA--LNYLHERGIIYRDLKLDNVLLDS 188
Query: 745 DFKPLLGEIEISKL-LDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLE 803
+ L + + K L P T S G+ YI PE + ++ GV++ E
Sbjct: 189 EGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 245
Query: 804 ILTTRLPVE 812
++ R P +
Sbjct: 246 MMAGRSPFD 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVH 826
+ ++ PE + T +V+S+GV+L EI + +
Sbjct: 207 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------------------LG 243
Query: 827 GAPARGETPEQILDARLSTVSFGWRKEMLTA--LKVALLCTDSTPAKRPKMKKVVEMLQE 884
+P G ++ RL + + T + L C P++RP ++VE L
Sbjct: 244 ASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 303
Query: 885 IKQ 887
+ Q
Sbjct: 304 LLQ 306
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 709 PTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
P A +A L +LH + I++ D+ N+LLD+ +L + + K + + ++
Sbjct: 139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTT 196
Query: 769 SAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEIL 805
S G+ Y+ PE + + + G VL E+L
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N+L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NNQL+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN+
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 40/183 (21%)
Query: 616 GTFSTVYKAVMPSGLILSVK--RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
GT+ VYKA G ++K RL+ D I + IRE+ L +L H N+V+ +
Sbjct: 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGI---PSTTIREISILKELKHSNIVKLYDVI 69
Query: 674 IYEDVALLLHNYLPNGTLAQLLH------ESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ +L+ +L + L +LL ES T S + + G+A+ H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV----------TAKSFLLQLLNGIAYCHD 118
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQ 787
++H D+ N+L++ + GE++I+ +A +FG P YT +
Sbjct: 119 RRVLHRDLKPQNLLINRE-----GELKIADF-----------GLARAFGI--PVRKYTHE 160
Query: 788 VTA 790
V
Sbjct: 161 VVT 163
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N+L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NNQL+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN+
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 40/183 (21%)
Query: 616 GTFSTVYKAVMPSGLILSVK--RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
GT+ VYKA G ++K RL+ D I + IRE+ L +L H N+V+ +
Sbjct: 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGI---PSTTIREISILKELKHSNIVKLYDVI 69
Query: 674 IYEDVALLLHNYLPNGTLAQLLH------ESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ +L+ +L + L +LL ES T S + + G+A+ H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV----------TAKSFLLQLLNGIAYCHD 118
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQ 787
++H D+ N+L++ + GE++I+ +A +FG P YT +
Sbjct: 119 RRVLHRDLKPQNLLINRE-----GELKIADF-----------GLARAFGI--PVRKYTHE 160
Query: 788 VTA 790
V
Sbjct: 161 VVT 163
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 211 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NNQL+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N+L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN+
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLDISSGNVLLDA 744
L G+L QL+ + P+ R +G A EGL +LH I+H D+ + NVLL +
Sbjct: 132 LEGGSLGQLIKQMGCLPE------DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 185
Query: 745 D-FKPLLGEIEISKLLDP---SKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVV 800
D + L + + L P K + + G+ ++ PE A +++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 801 LLEILTTRLPVEEDF 815
+L +L P + F
Sbjct: 246 MLHMLNGCHPWTQYF 260
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLL--DPS---KGTA 766
+ + VA+G+ FL IH D+++ N+LL + + +++ + DP KG A
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ ++ PE + T +V+S+GV+L EI +
Sbjct: 207 RL-----PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T ++ +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NNQL+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N+L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN+
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.6 bits (83), Expect = 0.060, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 27/218 (12%)
Query: 611 NMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHH-----------QNK----MIREL 655
N+ + GTF+ Y V G + LK DR +NK ++RE+
Sbjct: 13 NLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTL---AQLLHESTKQPDYRPDWPTRL 712
E L KL H N+++ F I ED + ++ G L +L E K+ + R
Sbjct: 73 ELLKKLDHPNIMKL--FEILEDSS----SFYIVGELYTGGELFDEIIKRKRFSEHDAAR- 125
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
I V G+ ++H I+H D+ N+LL++ K +I L + +
Sbjct: 126 -IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
G+ YI PE +V+S GV+L +L+ P
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.6 bits (83), Expect = 0.060, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 27/218 (12%)
Query: 611 NMIYCGTFSTVYKAVMPSGLILSVKRLKSMDRTIIHH-----------QNK----MIREL 655
N+ + GTF+ Y V G + LK DR +NK ++RE+
Sbjct: 13 NLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 656 EKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTL---AQLLHESTKQPDYRPDWPTRL 712
E L KL H N+++ F I ED + ++ G L +L E K+ + R
Sbjct: 73 ELLKKLDHPNIMKL--FEILEDSS----SFYIVGELYTGGELFDEIIKRKRFSEHDAAR- 125
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
I V G+ ++H I+H D+ N+LL++ K +I L + +
Sbjct: 126 -IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
G+ YI PE +V+S GV+L +L+ P
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPL-LGEIEISKLLDPSKGTASISAVAGSFGYI 778
LA++H + I H DI N+LLD L L + +K+L G ++S + + Y
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVSXICSRY-YR 208
Query: 779 PPEYAY-TMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHGAPARGE 833
PE + T +++S G V+ E++ + P E + V+++K V G P+R +
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK-VLGTPSREQ 265
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 616 GTFSTVYKAVMPSGLILSVK--RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFV 673
GT+ VYKA G ++K RL+ D I + IRE+ L +L H N+V+ +
Sbjct: 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGI---PSTTIREISILKELKHSNIVKLYDVI 69
Query: 674 IYEDVALLLHNYLPNGTLAQLLH------ESTKQPDYRPDWPTRLSIAIGVAEGLAFLHH 727
+ +L+ +L + L +LL ES T S + + G+A+ H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV----------TAKSFLLQLLNGIAYCHD 118
Query: 728 VAIIHLDISSGNVLLDADFKPLLGEIEIS 756
++H D+ N+L++ + GE++I+
Sbjct: 119 RRVLHRDLKPQNLLINRE-----GELKIA 142
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 608 KDSNMIYCGTFSTVYKA-VMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNL 666
K N++ G+F+ VY+A + +GL +++K + D+ ++ + M++ ++ K+ H L
Sbjct: 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMI---DKKAMY-KAGMVQRVQNEVKI-HCQL 68
Query: 667 VRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLS---------IAIG 717
P L L+NY + L+ E + R+
Sbjct: 69 KHP--------SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLD-PSKGTASISAVAGSFG 776
+ G+ +LH I+H D++ N+LL + + + ++ L P + ++ G+
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPN 177
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
YI PE A +V+S G + +L R P + D
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T + +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+LL+ + + ++++ DP T + +
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFG 776
++ L +LH II+ D+ NVLLD++ L + + K L P T S G+
Sbjct: 115 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPN 171
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
YI PE + ++ GV++ E++ R P +
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 686 LPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA-EGLAFLHHVAIIHLDISSGNVLLDA 744
L G+L QL+ + P+ R +G A EGL +LH I+H D+ + NVLL +
Sbjct: 148 LEGGSLGQLIKQMGCLPE------DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 201
Query: 745 D-FKPLLGEIEISKLLDP---SKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVV 800
D + L + + L P K + + G+ ++ PE A +++S +
Sbjct: 202 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 261
Query: 801 LLEILTTRLPVEEDF 815
+L +L P + F
Sbjct: 262 MLHMLNGCHPWTQYF 276
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL-LDPSKGTASISAVAGSFG 776
++ L +LH II+ D+ NVLLD++ L + + K L P T S G+
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPN 175
Query: 777 YIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
YI PE + ++ GV++ E++ R P +
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G + V K +PSG I++VKR+++ + Q +++ +L+ + +
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGAL 119
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLH-HVAIIHL 733
+ + + + L + +L + + + P+ IA+ + + L LH +++IH
Sbjct: 120 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 734 DISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV--AGSFGYIPPEY--------A 783
D+ NVL++A LG++++ S++ AG Y+ PE
Sbjct: 179 DVKPSNVLINA-----LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKG 233
Query: 784 YTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
Y+++ +++S G+ ++E+ R P +
Sbjct: 234 YSVK----SDIWSLGITMIELAILRFPYD 258
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 179/451 (39%), Gaps = 116/451 (25%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPREL---------- 130
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 203
Query: 131 ---------------GSLKDLRFFNIS-----------------------NNVLVGEIPD 152
G+ K++R ++ + +++GE +
Sbjct: 204 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 263
Query: 153 E--LKSLEK----------LEDFQVS--SNKLNGSIPFWVGNLTNLRVFT--AYENQLVG 196
E L+ +K +E+F+++ L+G I + LTN+ F+ + + V
Sbjct: 264 EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLF-NCLTNVSSFSLVSVTIERVK 322
Query: 197 EIPDNLGSVSELELLNLHSNQLEGPIPKSI----FASGK------------LEVLVLTQN 240
+ N G LEL+N Q KS+ F S K LE L L++N
Sbjct: 323 DFSYNFG-WQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRN 381
Query: 241 RLTGDIPELVGHCK-------SLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGE 293
L+ G C SL + + N ++ + +G + L + + ++NL
Sbjct: 382 GLS-----FKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQ- 434
Query: 294 IVPEFS---QCSNLTLLNLASN----GFTGVIPPELGQLINLQELILYENSLFGE--IPK 344
+ EFS NL L+++ F G+ L +L+ L + NS F E +P
Sbjct: 435 -MSEFSVFLSLRNLIYLDISHTHTRVAFNGI----FNGLSSLEVLKMAGNS-FQENFLPD 488
Query: 345 SILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKG--EIPHEIGNCMKLLQ 402
+NL LDLS + P A +S LQ L + N+ P++ N +++L
Sbjct: 489 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548
Query: 403 LHIGSNYLTGSIPPEIGHIRNLQIALNLSFN 433
+ N++ S E+ H + LNL+ N
Sbjct: 549 YSL--NHIMTSKKQELQHFPSSLAFLNLTQN 577
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 81 LVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFN 140
+ +EL+ L LDLS P+AF +LS L+ L++S N F + L L+ +
Sbjct: 489 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548
Query: 141 ISNNVLVGEIPDELK 155
S N ++ EL+
Sbjct: 549 YSLNHIMTSKKQELQ 563
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
Query: 71 SRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFG-GVIPRE 129
S L+ ++ L+ L LD+S+ F LS LE L ++ N F +P
Sbjct: 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 489
Query: 130 LGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTA 189
L++L F ++S L P SL L+ +S N F L +L+V
Sbjct: 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 549
Query: 190 YENQLVGEIPDNLGSV-SELELLNLHSNQL 218
N ++ L S L LNL N
Sbjct: 550 SLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 56 IDCDLNQAFVVKL-DLSRLQLR----GNITLVSELKALKRLDLSNN--AFSGTIP-SAFG 107
++C Q +KL L RL GN +L +L+ LDLS N +F G S FG
Sbjct: 336 VNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395
Query: 108 NLSELEFLDLSLNKFGGVIPRE-----LGSLKDLRFFNISNNVLVGEIPDELKSLEKLED 162
+S L++LDLS F GVI L L+ L F SN + E L SL L
Sbjct: 396 TIS-LKYLDLS---FNGVITMSSNFLGLEQLEHLDF-QHSNLKQMSEFSVFL-SLRNLIY 449
Query: 163 FQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGE-IPDNLGSVSELELLNLHSNQLEGP 221
+S + L++L V N +PD + L L+L QLE
Sbjct: 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 509
Query: 222 IPKSIFASGKLEVLVLTQNRL 242
P + + L+VL ++ N
Sbjct: 510 SPTAFNSLSSLQVLNMSHNNF 530
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 190/463 (41%), Gaps = 64/463 (13%)
Query: 68 LDLSRLQLRG-NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVI 126
LDLSR +++ L L L L+ N AF LS L+ L +
Sbjct: 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 140
Query: 127 PRELGSLKDLRFFNISNNVLVG-EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLR 185
+G LK L+ N+++N++ ++P+ +L LE +SSNK+ T+LR
Sbjct: 141 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY------CTDLR 194
Query: 186 VF----TAYENQLVGEIPDNL---GSVSELEL--LNLHSNQLEGPIPKSI---FASGKLE 233
V + + P N G+ E+ L L L +N + K+ A ++
Sbjct: 195 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVH 254
Query: 234 VLVLTQNRLTGDIPE-----LVGHCK-SLSNIRIGNND--LVGVIP--RAIGNVSGLTYF 283
LVL + R G++ + L G C ++ R+ D L G+I + NVS +
Sbjct: 255 RLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314
Query: 284 EADNNNLSGEIVPEFSQ---CSNLTLLNLASNGFTGVIPPELGQLI-------------- 326
+++ E V +FS +L L+N F + L +L
Sbjct: 315 -----SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 369
Query: 327 --NLQELILYEN--SLFGEIPKSILACKNLNKLDLSNNRFNG--TIPNAICDMSRLQYLL 380
+L+ L L N S G +S +L LDLS FNG T+ + + +L++L
Sbjct: 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLS---FNGVITMSSNFLGLEQLEHLD 426
Query: 381 LGQNSLKGEIPHEIGNCMK-LLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSL 439
++LK + ++ L+ L I + + + +L++ L ++ N +
Sbjct: 427 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENF 485
Query: 440 PPEL-GKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNN 481
P++ +L L D+S QL P+A + SL +N S+N
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 55 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSVSE 207
L L+ L F +G+L L+ N + ++P+ +++
Sbjct: 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 174
Query: 208 LELLNLHSNQLEG 220
LE L+L SN+++
Sbjct: 175 LEHLDLSSNKIQS 187
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCH--DNLVRPIGF 672
G ++ V AV + +G +VK +++ H ++++ RE+E L + C N++ I F
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVK---IIEKQAGHSRSRVFREVETLYQ-CQGNKNILELIEF 79
Query: 673 VIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIH 732
+ L+ L G++ L KQ + +R + VA L FLH I H
Sbjct: 80 FEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASR--VVRDVAAALDFLHTKGIAH 134
Query: 733 LDISSGNVLLDADFKPLLGEIEISKLLDPSKG-------------TASISAVAGSFGYIP 779
D+ N+L ++ K + K+ D G T ++ GS Y+
Sbjct: 135 RDLKPENILCESPEK-----VSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 780 PEY--AYTMQVT---APGNVYSYGVVLLEILTTRLP 810
PE +T Q T +++S GVVL +L+ P
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 58 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 110
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N L +
Sbjct: 111 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 170
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 171 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 206
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 25 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 84
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 85 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 129
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NN L+ L G+ +L + N L
Sbjct: 130 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 189
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 190 KGFFGSHLLPFAFLHGNPWLC 210
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 66 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 125
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 126 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN
Sbjct: 103 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 162
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 163 ELPAGLLNGLENLDTLLLQENSL 185
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFG 776
+ GL ++H ++H D+ N+L++ + + ++++ DP T ++ +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 777 YIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLL---DADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V + + +LH + I+H D+ N+L D + K ++ + +SK+ KG +S G+
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDV-MSTACGT 185
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
GY+ PE + + +S GV+ +L P
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/240 (17%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 659 SKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL-------------HESTKQPDYR 705
++L H N+V +G V + ++ +Y +G L + L + T +
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT 765
P P + + +A G+ +L ++H D+++ NVL+ + ++ + + + +
Sbjct: 144 P--PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 201
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFG--EGVDLVK 823
+ ++ PE + + +++SYGVVL E+ + L + + V++++
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261
Query: 824 WVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQ 883
P + P W + AL + C + P++RP+ K + L+
Sbjct: 262 NRQVLPCPDDCP-------------AW----VYALMIE--CWNEFPSRRPRFKDIHSRLR 302
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 30/215 (13%)
Query: 608 KDSNMIYCGTFSTVYKAVMP-SGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNL 666
K+ +I G F V+KA G +KR+K ++ K RE++ L+KL H N+
Sbjct: 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK-------YNNEKAEREVKALAKLDHVNI 66
Query: 667 VRP----IGFVIYEDVA------------LLLHNYLPNGTLAQLLHESTKQPDYRPDWPT 710
V GF + + + + GTL Q + K+ + D
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE---KRRGEKLDKVL 123
Query: 711 RLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISA 770
L + + +G+ ++H +I+ D+ N+ L + +G+ L+ K
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF---GLVTSLKNDGKRXR 180
Query: 771 VAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEIL 805
G+ Y+ PE + ++Y+ G++L E+L
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 181 LTNLRVFTAYENQLVGEIPDNL-GSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQ 239
L N ++ T ++N + ++P L S ++ELLNL+ Q+E + + ++ L +
Sbjct: 44 LNNQKIVT-FKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGF 102
Query: 240 NRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAI-GNVSGLTYFEADNNNLSGEIVPEF 298
N + P + + L+ + + NDL +PR I N LT NNNL F
Sbjct: 103 NAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 161
Query: 299 SQCSNLTLLNLASNGFTGV 317
++L L L+SN T V
Sbjct: 162 QATTSLQNLQLSSNRLTHV 180
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 326 INLQELILYENSLFGEIPKSIL-ACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQN 384
+N Q+++ ++NS ++P ++L + + + L+L++ + A +Q L +G N
Sbjct: 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN 103
Query: 385 SLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLPPELG 444
+++ PH N L L + N L+ S+P I H
Sbjct: 104 AIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFH------------------------ 138
Query: 445 KLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVPFQKSPNSSF 501
KL + +SNN L + SL + S+N LT S +P N S+
Sbjct: 139 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 195
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
+ K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88
Query: 147 VGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSV 205
L L+ L F +G+L L+ N + ++P+ ++
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148
Query: 206 SELELLNLHSNQLEG 220
+ LE L+L SN+++
Sbjct: 149 TNLEHLDLSSNKIQS 163
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 168/425 (39%), Gaps = 74/425 (17%)
Query: 74 QLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSE-LEFLDLSLNKFGGVIPRELGS 132
QL NIT VS KA+ RL + G P N+ E E + + + +
Sbjct: 190 QLSNNITFVS--KAVXRLTKLRQFYXGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN 247
Query: 133 LKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNK-LNGS--IPFW-------VGNLT 182
LKDL + N + ++P LK+L + + V+ N+ ++G W VG
Sbjct: 248 LKDLTDVEVYNCPNLTKLPTFLKALPEXQLINVACNRGISGEQLKDDWQALADAPVGEKI 307
Query: 183 NLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASG-KLEVLVLTQNR 241
+ ++ Y N + +L +L L NQLEG +P F S KL L L N+
Sbjct: 308 QI-IYIGYNNLKTFPVETSLQKXKKLGXLECLYNQLEGKLP--AFGSEIKLASLNLAYNQ 364
Query: 242 LTGDIPELVGHCKSLSNIRIGNNDLVGVIP-----RAIGNVSGLTYFEADNNNLSGE--- 293
+T G + + N+ +N L IP +++ S + + + ++ G+
Sbjct: 365 ITEIPANFCGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVXSAIDFSYNEIGSVDGKNFD 423
Query: 294 -IVPEFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKN- 351
+ P + N++ +NL++N + P EL + I + EIPK+ L +N
Sbjct: 424 PLDPTPFKGINVSSINLSNNQISK-FPKELFSTGSPLSSINLXGNXLTEIPKNSLKDENE 482
Query: 352 --------------LNKL------------------DLSNNRFNGTIPNAICDMSRLQ-Y 378
NKL DLS N F+ P + S L+ +
Sbjct: 483 NFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFS-KFPTQPLNSSTLKGF 541
Query: 379 LLLGQNSLKG-----EIPHEIGNCMKLLQLHIGSN---YLTGSIPPEIGHI---RNLQIA 427
+ Q +G E P I C L QL IGSN + I P I + N I+
Sbjct: 542 GIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDIKDNPNIS 601
Query: 428 LNLSF 432
++LS+
Sbjct: 602 IDLSY 606
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
+ K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 30 STKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 89
Query: 147 VGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSV 205
L L+ L F +G+L L+ N + ++P+ ++
Sbjct: 90 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 149
Query: 206 SELELLNLHSNQLEG 220
+ LE L+L SN+++
Sbjct: 150 TNLEHLDLSSNKIQS 164
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/240 (16%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 659 SKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL-------------HESTKQPDYR 705
++L H N+V +G V + ++ +Y +G L + L + T +
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGT 765
P P + + +A G+ +L ++H D+++ NVL+ + ++ + + + +
Sbjct: 127 P--PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 184
Query: 766 ASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFG--EGVDLVK 823
+ ++ PE + + +++SYGVVL E+ + L + + V++++
Sbjct: 185 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 244
Query: 824 WVHGAPARGETPEQILDARLSTVSFGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQ 883
P + P + + + C + P++RP+ K + L+
Sbjct: 245 NRQVLPCPDDCPAWV-------------------YALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
+ K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 31 STKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 90
Query: 147 VGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSV 205
L L+ L F +G+L L+ N + ++P+ ++
Sbjct: 91 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 150
Query: 206 SELELLNLHSNQLEG 220
+ LE L+L SN+++
Sbjct: 151 TNLEHLDLSSNKIQS 165
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
+ K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 31 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 90
Query: 147 VGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSV 205
L L+ L F +G+L L+ N + ++P+ ++
Sbjct: 91 QSLALGAFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 150
Query: 206 SELELLNLHSNQLEG 220
+ LE L+L SN+++
Sbjct: 151 TNLEHLDLSSNKIQS 165
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NN L+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRCELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NN L+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 51 CNWKGIDCDLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLS 110
C + D + LDLS QL+ L L AL LD+S N + A L
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124
Query: 111 ELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKL 170
EL+ L L N+ + P L L +++NN L L LE L+ + N L
Sbjct: 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL------LDPSKGTA 766
S+ + +G+ +LH ++H D+ N+L+ + P G ++I+ + P K A
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLA 190
Query: 767 SISAVAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTT 807
+ V +F Y PE T ++++ G + E+LT+
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 14/278 (5%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G FS V + + +P+G + K + + + HQ K+ RE L H N+VR +
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPNIVRLHDSIS 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
E L+ + + G L E +Y + I + E + H I+H D
Sbjct: 74 EEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQ-QILESVNHCHLNGIVHRD 128
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFGYIPPEYAYTMQVTAPGN 793
+ N+LL + K ++ L +G + AG+ GY+ PE P +
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVD 188
Query: 794 VYSYGVVLLEILTTRLPV-EEDFGEGVDLVK---WVHGAPARGE-TPE-QILDARLSTVS 847
+++ GV+L +L P +ED +K + +P TPE + L ++ T++
Sbjct: 189 MWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTIN 248
Query: 848 FGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
R ALK +C ST A ++ V+ L++
Sbjct: 249 PAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKF 286
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 87 ALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVL 146
+ K LDLS N +F + EL+ LDLS + + SL L ++ N +
Sbjct: 30 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 89
Query: 147 VGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSV 205
L L+ L F +G+L L+ N + ++P+ ++
Sbjct: 90 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 149
Query: 206 SELELLNLHSNQLEG 220
+ LE L+L SN+++
Sbjct: 150 TNLEHLDLSSNKIQS 164
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 14/278 (5%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G FS V + + +P+G + K + + + HQ K+ RE L H N+VR +
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPNIVRLHDSIS 73
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
E L+ + + G L E +Y + I + E + H I+H D
Sbjct: 74 EEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQ-QILESVNHCHLNGIVHRD 128
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFGYIPPEYAYTMQVTAPGN 793
+ N+LL + K ++ L +G + AG+ GY+ PE P +
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVD 188
Query: 794 VYSYGVVLLEILTTRLPV-EEDFGEGVDLVK---WVHGAPARGE-TPE-QILDARLSTVS 847
+++ GV+L +L P +ED +K + +P TPE + L ++ T++
Sbjct: 189 MWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTIN 248
Query: 848 FGWRKEMLTALKVALLCTDSTPAKRPKMKKVVEMLQEI 885
R ALK +C ST A ++ V+ L++
Sbjct: 249 PAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKF 286
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 701 QPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA-------------DFK 747
Q +Y P +S+ +A G+A LH + IIH D+ N+L+ + +
Sbjct: 130 QKEYNP-----ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 748 PLLGEIEISKLLDPSKG--TASISAVAGSFGYIPPEY---AYTMQVTAPGNVYSYGVVLL 802
L+ + + K LD + +++ +G+ G+ PE + ++T +++S G V
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 803 EILTT-RLPVEEDFGEGVDLVKWV 825
IL+ + P + + ++++ +
Sbjct: 245 YILSKGKHPFGDKYSRESNIIRGI 268
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI-----SAVAGSF 775
G+++ H + I H D+ N LLD P L K+ D +S+ + G+
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRL------KICDFGYSKSSVLHSQPKSTVGTP 181
Query: 776 GYIPPEYAYTMQVTAP-GNVYSYGVVLLEILTTRLPVEE 813
YI PE + +V+S GV L +L P E+
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 40/338 (11%)
Query: 85 LKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV-IPRELGSLKDLRFFNISN 143
L +L+ LDLS+N S S FG LS L++L+L N + + + +L +L+ I N
Sbjct: 99 LGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN 158
Query: 144 NVLVGEIPD-ELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAY--ENQLVGEI-P 199
EI + L L + ++ + L + ++ ++ T + E+ + EI
Sbjct: 159 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFA 218
Query: 200 DNLGSVSELELLNLHSNQLE-GPIPKSIFASGKLEVLVLTQNRLT----GDIPELVGHCK 254
D L SV LEL + + + + P+P S ++ L + LT ++ +L+ +
Sbjct: 219 DILSSVRYLELRDTNLARFQFSPLPVDE-VSSPMKKLAFRGSVLTDESFNELLKLLRYIL 277
Query: 255 SLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGF 314
LS + + L G+ D N ++V E + +T+ L F
Sbjct: 278 ELSEVEFDDCTLNGL---------------GDFNPSESDVVSELGKVETVTIRRLHIPQF 322
Query: 315 TGVIPPELGQLINLQE---LILYENSLFGEIPKSILA-CKNLNKLDLSNN-RFNGTIPNA 369
+ +L + +L E I ENS +P S K+L LDLS N + N+
Sbjct: 323 --YLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 380
Query: 370 ICD--MSRLQYLLLGQNSLK-----GEIPHEIGNCMKL 400
C LQ L+L QN L+ GEI + N L
Sbjct: 381 ACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSL 418
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 701 QPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA-------------DFK 747
Q +Y P +S+ +A G+A LH + IIH D+ N+L+ + +
Sbjct: 130 QKEYNP-----ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 748 PLLGEIEISKLLDPSKG--TASISAVAGSFGYIPPEY---AYTMQVTAPGNVYSYGVVLL 802
L+ + + K LD + +++ +G+ G+ PE + ++T +++S G V
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 803 EILTT-RLPVEEDFGEGVDLVKWV 825
IL+ + P + + ++++ +
Sbjct: 245 YILSKGKHPFGDKYSRESNIIRGI 268
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDL 136
+ LK LK L++++N S +P F NL+ LE LDLS NK + +L L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 81 LVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFN 140
+ +EL+ L LDLS P+AF +LS L+ L++S N F + L L+ +
Sbjct: 465 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 524
Query: 141 ISNNVLVGEIPDELK 155
S N ++ EL+
Sbjct: 525 YSLNHIMTSKKQELQ 539
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 2/148 (1%)
Query: 71 SRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFG-GVIPRE 129
S L+ ++ L+ L LD+S+ F LS LE L ++ N F +P
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 130 LGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTA 189
L++L F ++S L P SL L+ +S N F L +L+V
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 525
Query: 190 YENQLVGEIPDNLGSV-SELELLNLHSN 216
N ++ L S L LNL N
Sbjct: 526 SLNHIMTSKKQELQHFPSSLAFLNLTQN 553
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 39/191 (20%)
Query: 84 ELKALKRLDLSNN----AFSGTIPSAFGNLSELEFLDLSLN--KFGGVIPRELGSLKDLR 137
+LK+LKRL ++N AFS +L LEFLDLS N F G + L+
Sbjct: 323 KLKSLKRLTFTSNKGGNAFSEV------DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 138 FFNISNNVLVGEIPDELKSLEKLE--DFQVSSNKLNGSIPFWVG---------------- 179
+ ++S N ++ + LE+LE DFQ S+ K ++
Sbjct: 377 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 180 -------NLTNLRVFTAYENQLVGE-IPDNLGSVSELELLNLHSNQLEGPIPKSIFASGK 231
L++L V N +PD + L L+L QLE P + +
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495
Query: 232 LEVLVLTQNRL 242
L+VL ++ N
Sbjct: 496 LQVLNMSHNNF 506
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 31/231 (13%)
Query: 208 LELLNLHSNQL--EGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNND 265
LE L+L N L +G +S F + L+ L L+ N + +G + L ++ +++
Sbjct: 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSN 407
Query: 266 LVGVIPRAIG-NVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQ 324
L + ++ ++ L Y + + + F+ S+L +L +A N F P++
Sbjct: 408 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI-- 465
Query: 325 LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQN 384
F E+ +NL LDLS + P A +S LQ L + N
Sbjct: 466 --------------FTEL-------RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 385 SLKG--EIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFN 433
+ P++ N +++L + N++ S E+ H + LNL+ N
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSL--NHIMTSKKQELQHFPSSLAFLNLTQN 553
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 182/462 (39%), Gaps = 62/462 (13%)
Query: 68 LDLSRLQLRG-NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVI 126
LDLSR +++ L L L L+ N AF LS L+ L +
Sbjct: 57 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116
Query: 127 PRELGSLKDLRFFNISNNVLVG-EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLR 185
+G LK L+ N+++N++ ++P+ +L LE +SSNK+ T+LR
Sbjct: 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY------CTDLR 170
Query: 186 VF----TAYENQLVGEIPDNL---GSVSELEL--LNLHSNQLEGPIPKSI---FASGKLE 233
V + + P N G+ E+ L L L +N + K+ A ++
Sbjct: 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVH 230
Query: 234 VLVLTQNRLTGDIPE-----LVGHCK-SLSNIRIGNND--------------------LV 267
LVL + R G++ + L G C ++ R+ D LV
Sbjct: 231 RLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290
Query: 268 GVIPRAIGNVS---GLTYFEADNNNLSGEIVPEFSQCSNLTLL-NLASNGFTGVIPPELG 323
V + + S G + E N + LT N N F+ V P L
Sbjct: 291 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSL- 349
Query: 324 QLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNG--TIPNAICDMSRLQYLLL 381
+ ++L L S G +S +L LDLS FNG T+ + + +L++L
Sbjct: 350 EFLDLSRNGL---SFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDF 403
Query: 382 GQNSLKGEIPHEIGNCMK-LLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLP 440
++LK + ++ L+ L I + + + +L++ L ++ N +
Sbjct: 404 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENFL 462
Query: 441 PEL-GKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNN 481
P++ +L L D+S QL P+A + SL +N S+N
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 18/206 (8%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + I++ K+L + D HQ K+ RE L H N+VR
Sbjct: 33 GAFSVVRRCVKVLAGQEYAAKIINTKKLSARD-----HQ-KLEREARICRLLKHPNIVRL 86
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
+ E L+ + + G L E +Y + I + E + H +
Sbjct: 87 HDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQ-QILEAVLHCHQMG 141
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFGYIPPEYAYTMQV 788
++H D+ N+LL + K ++ L +G + AG+ GY+ PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 789 TAPGNVYSYGVVLLEILTTRLPVEED 814
P ++++ GV+L +L P ++
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDE 227
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRAELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NN L+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 181 LTNLRVFTAYENQLVGEIPDNL-GSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQ 239
L N ++ T ++N + ++P L S ++ELLNL+ Q+E + + ++ L +
Sbjct: 50 LNNQKIVT-FKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGF 108
Query: 240 NRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAI-GNVSGLTYFEADNNNLSGEIVPEF 298
N + P + + L+ + + NDL +PR I N LT NNNL F
Sbjct: 109 NAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167
Query: 299 SQCSNLTLLNLASNGFTGV 317
++L L L+SN T V
Sbjct: 168 QATTSLQNLQLSSNRLTHV 186
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 326 INLQELILYENSLFGEIPKSIL-ACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLLLGQN 384
+N Q+++ ++NS ++P ++L + + + L+L++ + A +Q L +G N
Sbjct: 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN 109
Query: 385 SLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQIALNLSFNHLHGSLPPELG 444
+++ PH N L L + N L+ S+P I H + P
Sbjct: 110 AIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFH-----------------NTP---- 147
Query: 445 KLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPVPSFVPFQKSPNSSF 501
KL + +SNN L + SL + S+N LT S +P N S+
Sbjct: 148 ---KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 201
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 44/229 (19%)
Query: 604 KATMKDSNMIYC---GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSK 660
+ +D ++ C G + V++ G ++VK S D + RE E +
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNT 56
Query: 661 --LCHDNLVRPIGFVIYEDVA-------LLLHNYLPNGTLAQLLHESTKQPDYRPDWPTR 711
L H+N+ +GF+ + + L+ +Y G+L L +T D +
Sbjct: 57 VMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT------LDTVSC 107
Query: 712 LSIAIGVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSK 763
L I + +A GLA LH AI H D+ S N+L+ + + + ++ ++ + S
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 764 GTASI--SAVAGSFGYIPPEY-AYTMQVTAPG-----NVYSYGVVLLEI 804
+ + G+ Y+ PE T+QV +++++G+VL E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRAELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NN L+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 578 SSQPSIIAGNVLVENLRQAIDLDAVVKATMKDSNMIYCGTFSTVYKAVM-PSGLILSVKR 636
SS P +G E + A + V+A +D + G + V AV +G +++K+
Sbjct: 2 SSPPPARSGFYRQEVTKTAWE----VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKK 57
Query: 637 LKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIG-FVIYEDVALLLHNYLPNGTLAQLL 695
L ++ + + + REL L + H+N++ + F E + YL + L
Sbjct: 58 LYRPFQSELFAK-RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL 116
Query: 696 HESTKQPDYRPDWPTRLSIAI-GVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE 754
+ K D R+ + + +GL ++H IIH D+ GN+ ++ D E++
Sbjct: 117 GKLMKHEKLGED---RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED-----CELK 168
Query: 755 ISKLLDPSKGTASISAVAGSFGYIPPEYAYT-MQVTAPGNVYSYGVVLLEILTTR 808
I + + + + Y PE M+ T +++S G ++ E++T +
Sbjct: 169 ILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAVAGSFGY 777
GL +H+ +++ D+ N+LLD G + IS L D SK S G+ GY
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEH-----GHVRISDLGLACDFSKKKPHAS--VGTHGY 356
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + + + +S G +L ++L P +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAVAGSFGY 777
GL +H+ +++ D+ N+LLD G + IS L D SK S G+ GY
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEH-----GHVRISDLGLACDFSKKKPHAS--VGTHGY 356
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + + + +S G +L ++L P +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 60 LNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSL 119
L Q + + +L++LQ+ G L L LDLS+N ++P L L LD+S
Sbjct: 57 LTQLNLDRAELTKLQVDGT------LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109
Query: 120 NKFGGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVG 179
N+ + L L +L+ + N L P L KLE +++N L +
Sbjct: 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
Query: 180 NLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSN 216
L NL EN L IP L LH N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 317 VIPPELGQ---LINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFNGTIPN-AICD 372
+PP+L + +++L E +LY SL +P + L NL++ +L+ + +GT+P D
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLD 83
Query: 373 MS--RLQYL-LLGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEIGHIRNLQ--IA 427
+S +LQ L LLGQ +P L L + N LT S+P +G +R L
Sbjct: 84 LSHNQLQSLPLLGQT-----LP-------ALTVLDVSFNRLT-SLP--LGALRGLGELQE 128
Query: 428 LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSLIEVNFSNNLLTGPV 487
L L N L P L KL ++NN L+ L G+ +L + N L
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Query: 488 PSFVPFQKSPNSSFFGNKGLC 508
F P + GN LC
Sbjct: 189 KGFFGSHLLPFAFLHGNPWLC 209
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 304 LTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNRFN 363
LT+L+++ N T + L L LQEL L N L P + L KL L+NN
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161
Query: 364 GTIPNAICDMSRLQYLLLGQNSL 386
+ + L LLL +NSL
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSL 184
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAVAGSFGY 777
GL +H+ +++ D+ N+LLD G + IS L D SK S G+ GY
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEH-----GHVRISDLGLACDFSKKKPHAS--VGTHGY 356
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + + + +S G +L ++L P +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKL---LDPSKGTASISAVAGSFGY 777
GL +H+ +++ D+ N+LLD G + IS L D SK S G+ GY
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEH-----GHVRISDLGLACDFSKKKPHAS--VGTHGY 355
Query: 778 IPPEYAYT-MQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + + + +S G +L ++L P +
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 674 IYEDVALLLHNYL--------PNGTLAQLL-----HESTKQPDYRPDWPTR----LSIAI 716
IY+ V L N L NGT QL HE DY + + +A+
Sbjct: 48 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107
Query: 717 GVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
A GLA LH AI H D+ S N+L+ + + ++ ++ D + T I
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 769 S--AVAGSFGYIPPEY------AYTMQVTAPGNVYSYGVVLLEI 804
+ G+ Y+ PE + ++Y+ G+V EI
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI-----SAVAGSF 775
G+++ H + + H D+ N LLD P L K+ D AS+ + G+
Sbjct: 127 GVSYAHAMQVAHRDLKLENTLLDGSPAPRL------KIADFGYSKASVLHSQPKSAVGTP 180
Query: 776 GYIPPEYAYTMQVTAP-GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVH 826
YI PE + +V+S GV L +L P ED E + K +H
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKTIH 231
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 35/321 (10%)
Query: 85 LKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGV-IPRELGSLKDLRFFNISN 143
L +L+ LDLS+N S S FG LS L++L+L N + + + +L +L+ I N
Sbjct: 73 LGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN 132
Query: 144 NVLVGEIPD-ELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAY--ENQLVGEI-P 199
EI + L L + ++ + L + ++ ++ T + E+ + EI
Sbjct: 133 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFA 192
Query: 200 DNLGSVSELELLNLHSNQLE-GPIPKSIFASGKLEVLVLTQNRLT----GDIPELVGHCK 254
D L SV LEL + + + + P+P S ++ L + LT ++ +L+ +
Sbjct: 193 DILSSVRYLELRDTNLARFQFSPLPVDE-VSSPMKKLAFRGSVLTDESFNELLKLLRYIL 251
Query: 255 SLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGF 314
LS + + L G+ D N ++V E + +T+ L F
Sbjct: 252 ELSEVEFDDCTLNGL---------------GDFNPSESDVVSELGKVETVTIRRLHIPQF 296
Query: 315 TGVIPPELGQLINLQE---LILYENSLFGEIPKSILA-CKNLNKLDLSNN-RFNGTIPNA 369
+ +L + +L E I ENS +P S K+L LDLS N + N+
Sbjct: 297 --YLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 354
Query: 370 ICD--MSRLQYLLLGQNSLKG 388
C LQ L+L QN L+
Sbjct: 355 ACKGAWPSLQTLVLSQNHLRS 375
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 20/198 (10%)
Query: 639 SMDRTIIHHQN---KMIRELEKLSKLCHDNLVRPIGFVIYE----DVALLLHNYLPNGTL 691
++ R + H Q + RE + H N++R + + + E A LL + GTL
Sbjct: 58 ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 692 AQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLG 751
+ + ++ + L + +G+ GL +H H D+ N+LL + +P+L
Sbjct: 118 WNEIERLKDKGNFLTE-DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLM 176
Query: 752 EI----EISKLLDPSKGTASISAVAG---SFGYIPPEYAYTMQ----VTAPGNVYSYGVV 800
++ + ++ S+ ++ A + Y PE +++Q + +V+S G V
Sbjct: 177 DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL-FSVQSHCVIDERTDVWSLGCV 235
Query: 801 LLEILTTRLPVEEDFGEG 818
L ++ P + F +G
Sbjct: 236 LYAMMFGEGPYDMVFQKG 253
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 674 IYEDVALLLHNYL--------PNGTLAQLL-----HESTKQPDYRPDWPTR----LSIAI 716
IY+ V L N L NGT QL HE DY + + +A+
Sbjct: 51 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 110
Query: 717 GVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
A GLA LH AI H D+ S N+L+ + + ++ ++ D + T I
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
Query: 769 S--AVAGSFGYIPPEY------AYTMQVTAPGNVYSYGVVLLEI 804
+ G+ Y+ PE + ++Y+ G+V EI
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 674 IYEDVALLLHNYL--------PNGTLAQLL-----HESTKQPDYRPDWPTR----LSIAI 716
IY+ V L N L NGT QL HE DY + + +A+
Sbjct: 49 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 108
Query: 717 GVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
A GLA LH AI H D+ S N+L+ + + ++ ++ D + T I
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
Query: 769 S--AVAGSFGYIPPEY------AYTMQVTAPGNVYSYGVVLLEI 804
+ G+ Y+ PE + ++Y+ G+V EI
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 722 LAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA-GSFGYIPP 780
LA LH ++HLD+ N+ L + LG+ + L GTA V G Y+ P
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL----GTAGAGEVQEGDPRYMAP 225
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEI 804
E TA +V+S G+ +LE+
Sbjct: 226 ELLQGSYGTA-ADVFSLGLTILEV 248
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI-----SAVAGSF 775
G+++ H + + H D+ N LLD P L K+ D +S+ + G+
Sbjct: 126 GVSYCHAMQVCHRDLKLENTLLDGSPAPRL------KICDFGYSKSSVLHSQPKSTVGTP 179
Query: 776 GYIPPEYAYTMQVTAP-GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVH 826
YI PE + +V+S GV L +L P ED E + K +H
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKTIH 230
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI-----SAVAGSF 775
G+++ H + + H D+ N LLD P L K+ D +S+ + G+
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRL------KICDFGYSKSSVLHSQPKSTVGTP 180
Query: 776 GYIPPEYAYTMQVTAP-GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVH 826
YI PE + +V+S GV L +L P ED E + K +H
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKTIH 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 616 GTFSTVYKAVMPSG-LILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G++ VY A + +++K++ M +I + +++RE+ L++L D ++R +I
Sbjct: 39 GSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCK-RILREITILNRLKSDYIIRLHDLII 97
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
ED+ Y+ L + K P + + + +I + G F+H IIH D
Sbjct: 98 PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVK-TILYNLLLGEKFIHESGIIHRD 156
Query: 735 ISSGNVLLDAD 745
+ N LL+ D
Sbjct: 157 LKPANCLLNQD 167
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 81 LVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFN 140
+ +EL+ L LDLS P+AF +LS L+ L++S N F + L L+ +
Sbjct: 170 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229
Query: 141 ISNNVLVGEIPDELK 155
S N ++ EL+
Sbjct: 230 YSLNHIMTSKKQELQ 244
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 2/159 (1%)
Query: 71 SRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFG-GVIPRE 129
S L+ ++ L+ L LD+S+ F LS LE L ++ N F +P
Sbjct: 111 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 170
Query: 130 LGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTA 189
L++L F ++S L P SL L+ +S N F L +L+V
Sbjct: 171 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230
Query: 190 YENQLVGEIPDNLGSV-SELELLNLHSNQLEGPIPKSIF 227
N ++ L S L LNL N F
Sbjct: 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSF 269
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPP 780
GL FLH ++H D+ N+L+ + + L + ++++ ++++V + Y P
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAP 188
Query: 781 EYAYTMQVTAPGNVYSYGVVLLEILTTR 808
E P +++S G + E+ +
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 674 IYEDVALLLHNYL--------PNGTLAQLL-----HESTKQPDYRPDWPTR----LSIAI 716
IY+ V L N L NGT QL HE DY + + +A+
Sbjct: 54 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 113
Query: 717 GVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
A GLA LH AI H D+ S N+L+ + + ++ ++ D + T I
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
Query: 769 S--AVAGSFGYIPPEY------AYTMQVTAPGNVYSYGVVLLEI 804
+ G+ Y+ PE + ++Y+ G+V EI
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 616 GTFSTVYKAVM------PSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRP 669
G FS V + V + +I++ K+L + D HQ K+ RE L H N+VR
Sbjct: 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARD-----HQ-KLEREARICRLLKHPNIVRL 75
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
+ E L+ + + G L E +Y + I + E + H +
Sbjct: 76 HDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQ-QILEAVLHCHQMG 130
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKG-TASISAVAGSFGYIPPEYAYTMQV 788
++H ++ N+LL + K ++ L +G + AG+ GY+ PE
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 789 TAPGNVYSYGVVLLEILTTRLPVEED 814
P ++++ GV+L +L P ++
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDE 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G + V K +PSG I++VKR+++ + Q +++ +L+ + +
Sbjct: 18 GAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGAL 75
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLH-HVAIIHL 733
+ + + + L + +L + + + P+ IA+ + + L LH +++IH
Sbjct: 76 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 734 DISSGNVLLDADFKPLLGEIEISKLL--DPSKGTASISAVAGSFGYIPPEY--------A 783
D+ NVL++A + + + IS L D +K AG Y+ PE
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-----AGCKPYMAPERINPELNQKG 189
Query: 784 YTMQVTAPGNVYSYGVVLLEILTTRLPVE 812
Y+++ +++S G+ ++E+ R P +
Sbjct: 190 YSVK----SDIWSLGITMIELAILRFPYD 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 674 IYEDVALLLHNYL--------PNGTLAQLL-----HESTKQPDYRPDWPTR----LSIAI 716
IY+ V L N L NGT QL HE DY + + +A+
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 146
Query: 717 GVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
A GLA LH AI H D+ S N+L+ + + ++ ++ D + T I
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 769 S--AVAGSFGYIPPEY------AYTMQVTAPGNVYSYGVVLLEI 804
+ G+ Y+ PE + ++Y+ G+V EI
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 674 IYEDVALLLHNYL--------PNGTLAQLL-----HESTKQPDYRPDWPTR----LSIAI 716
IY+ V L N L NGT QL HE DY + + +A+
Sbjct: 74 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 133
Query: 717 GVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI 768
A GLA LH AI H D+ S N+L+ + + ++ ++ D + T I
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
Query: 769 S--AVAGSFGYIPPEY------AYTMQVTAPGNVYSYGVVLLEI 804
+ G+ Y+ PE + ++Y+ G+V EI
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 54/338 (15%)
Query: 110 SELEFLDLSLNKFGGVIPRELGSLKDLRFFN---------ISNNVLVGEIPDELKSLEKL 160
+ + ++DLSLN + L+DL+F I NN G + L+
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 161 EDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEI--PDNLGSVSELELLNLHSNQL 218
+ Q+ + NG L NL V T + L G + + ++ LE+L L N +
Sbjct: 90 QFLQLETGAFNG--------LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141
Query: 219 EGPIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIG-- 275
+ P S F + + VL LT N++ I DL+ +
Sbjct: 142 KKIQPASFFLNMRRFHVLDLTFNKVKS----------------ICEEDLLNFQGKHFTLL 185
Query: 276 NVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVIPPELGQLI---NLQELI 332
+S +T + + L E + +++T L+L+ NGF + I +Q LI
Sbjct: 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245
Query: 333 LYEN----SLFGEI----PKSI----LACKNLNKLDLSNNRFNGTIPNAICDMSRLQYLL 380
L + S FG P + L + DLS ++ + + + L+ L
Sbjct: 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLT 305
Query: 381 LGQNSLKGEIPHEIGNCMKLLQLHIGSNYLTGSIPPEI 418
L QN + + L +L + +N L S+P I
Sbjct: 306 LAQNEINKIDDNAFWGLTHLKELALDTNQLK-SVPDGI 342
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 701 QPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA-------------DFK 747
Q +Y P +S+ +A G+A LH + IIH D+ N+L+ + +
Sbjct: 112 QKEYNP-----ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 748 PLLGEIEISKLLDPSKGT--ASISAVAGSFGYIPPE-------YAYTMQVTAPGNVYSYG 798
L+ + + K LD + + +++ +G+ G+ PE ++T +++S G
Sbjct: 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 799 VVLLEILTT-RLPVEEDFGEGVDLVKWV 825
V IL+ + P + + ++++ +
Sbjct: 227 CVFYYILSKGKHPFGDKYSRESNIIRGI 254
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 17/154 (11%)
Query: 665 NLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAF 724
N V+P V + + Y N TL L+H W + + E L++
Sbjct: 76 NFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEALSY 131
Query: 725 LHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPS------------KGTASISAVA 772
+H IIH ++ N+ +D +G+ ++K + S + ++++
Sbjct: 132 IHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 773 GSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEIL 805
G+ Y+ E T + YS G++ E +
Sbjct: 192 GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP 779
GL FLH ++H D+ N+L+ + + L + ++++ ++++V + Y
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRA 187
Query: 780 PEYAYTMQVTAPGNVYSYGVVLLEILTTR 808
PE P +++S G + E+ +
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 652 IRELEKLSKLCHDNLVRPIGFVIYEDVA----LLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+RE E L KL H N+V+ F I E+ +L+ + P G+L +L E + Y
Sbjct: 55 MREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA--YGLP 110
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVL 741
L + V G+ L I+H +I GN++
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 23/241 (9%)
Query: 83 SELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGS-LKDLRFFNI 141
S L +L+ LDLS N S S F LS L FL+L N + + L S L L+ +
Sbjct: 97 SSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV 156
Query: 142 SNNVLVGEIP-DELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPD 200
N +I + L LE+ ++ ++ L P + ++ N+ + Q + +
Sbjct: 157 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEI 216
Query: 201 NLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIR 260
+ S +E L L L+ F +L TG+ L+ + N++
Sbjct: 217 FVDVTSSVECLELRDTDLD------TFHFSELS---------TGETNSLIKKF-TFRNVK 260
Query: 261 IGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPE--FSQCSNLTLLNLASNGFTGVI 318
I + L V+ + + +SGL E N L VP+ F + ++L + L +N +
Sbjct: 261 ITDESLFQVM-KLLNQISGLLELEFSRNQLKS--VPDGIFDRLTSLQKIWLHTNPWDCSC 317
Query: 319 P 319
P
Sbjct: 318 P 318
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
V G+ +LH I+H D+ N+LL++ K L +I L + + G+ Y
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVD--LVKWVHGAPARGETP 835
I PE + +V+S GV+L +L P FG D +++ V ++P
Sbjct: 205 IAPE-VLRKKYDEKCDVWSIGVILFILLAGYPP----FGGQTDQEILRKVEKGKYTFDSP 259
Query: 836 E 836
E
Sbjct: 260 E 260
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP 779
GL FLH ++H D+ N+L+ + + L + ++++ ++++V + Y
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRA 187
Query: 780 PEYAYTMQVTAPGNVYSYGVVLLEILTTR 808
PE P +++S G + E+ +
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI 674
G++ VY A + +++K++ M +I + +++RE+ L++L D ++R +I
Sbjct: 37 GSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCK-RILREITILNRLKSDYIIRLYDLII 95
Query: 675 YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLD 734
+D+ Y+ L + K P + + + +I + G F+H IIH D
Sbjct: 96 PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK-TILYNLLLGENFIHESGIIHRD 154
Query: 735 ISSGNVLLDADFKPLLGEIEISKLLDPSKGT 765
+ N LL+ D + + +++ ++ K T
Sbjct: 155 LKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
Query: 637 LKSMDRTIIHHQNKMIR-ELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLL 695
+K MD+ + I+ E+E L L H ++ + + + ++ Y P G L +
Sbjct: 40 IKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI 99
Query: 696 HESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI 755
D + TR+ + + +A++H H D+ N+L D K L I+
Sbjct: 100 ISQ----DRLSEEETRV-VFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHK--LKLIDF 152
Query: 756 SKLLDPSKGTAS--ISAVAGSFGYIPPEYAY-TMQVTAPGNVYSYGVVLLEILTTRLPVE 812
P KG + GS Y PE + + +V+S G++L ++ LP +
Sbjct: 153 GLCAKP-KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
Query: 813 ED 814
+D
Sbjct: 212 DD 213
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 49/281 (17%)
Query: 67 KLDLSRLQLRGNITLVSELKALKRLDLSNNAF-------SGTIPS--------------- 104
+LDL+ L+G + + L LK+L LS N F + PS
Sbjct: 279 ELDLTATHLKGLPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHL 338
Query: 105 ---AFGNLSELEFLDLSLNKF--GGVIPRELGSLKDLRFFNISNNVLVGEIPDELKSLEK 159
L L+ LDLS N +L +L L+ N+S+N +G K +
Sbjct: 339 GVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQ 398
Query: 160 LEDFQVSSNKLNGSIP---------FWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELEL 210
LE ++ +L+ + P V NLT + T+ ++ L G + L
Sbjct: 399 LELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAG--------LPVLRH 450
Query: 211 LNLHSNQLE-GPIPKS--IFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLV 267
LNL N + G I K+ + G LEVL+L+ L + +S++ + +N L
Sbjct: 451 LNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLT 510
Query: 268 GVIPRAIGNVSGLTYFEADN--NNLSGEIVPEFSQCSNLTL 306
++ ++ G+ A N N +S ++P SQ S + L
Sbjct: 511 CDSIDSLSHLKGIYLNLAANSINIISPRLLPILSQQSTINL 551
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 37/250 (14%)
Query: 59 DLNQAFVVKLDLSRLQLRGNITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLS 118
DL+ + D LQL+ L L+ L+LS+N G AF +LE LDL+
Sbjct: 353 DLSHNDIEASDCCSLQLKN-------LSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLA 405
Query: 119 LNKFGGVIPRE-LGSLKDLRFFNISNNVLVGEIPDELKSLEKLEDFQVSSNKLNGSIPFW 177
+ P+ +L L+ N++ L L L L + N F
Sbjct: 406 FTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNH------FQ 459
Query: 178 VGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVL 237
G +T + L +V LE+L L S L ++ + GK+ + L
Sbjct: 460 DGTITKTNL---------------LQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDL 504
Query: 238 TQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPE 297
+ N LT D + + H K + + + N + + PR + +S + +N P
Sbjct: 505 SHNSLTCDSIDSLSHLKGIY-LNLAANSINIISPRLLPILSQQSTINLSHN-------PL 556
Query: 298 FSQCSNLTLL 307
CSN+ L
Sbjct: 557 DCTCSNIHFL 566
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 13/149 (8%)
Query: 672 FVIYEDVALL--LHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
F ++D L + Y+P G L L+ D W + + +A L +H +
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLA--LDAIHSMG 188
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM--- 786
IH D+ N+LLD L + ++ +G G+ YI PE +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 787 -QVTAPGNVYSYGVVLLEILTTRLPVEED 814
+ +S GV L E+L P D
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYAD 276
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 13/149 (8%)
Query: 672 FVIYEDVALL--LHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
F ++D L + Y+P G L L+ D W + + +A L +H +
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLA--LDAIHSMG 193
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM--- 786
IH D+ N+LLD L + ++ +G G+ YI PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 787 -QVTAPGNVYSYGVVLLEILTTRLPVEED 814
+ +S GV L E+L P D
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG--TLAQLLHESTKQPDYR 705
+ ++RE++ L +L H N+++ F +ED YL T +L E + +
Sbjct: 70 KESLLREVQLLKQLDHPNIMKLYEF--FEDKGYF---YLVGEVYTGGELFDEIISRKRFS 124
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP---------LLGEIEIS 756
R I V G+ ++H I+H D+ N+LL++ K L E S
Sbjct: 125 EVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 757 KLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
K + GTA YI PE + +V+S GV+L +L+
Sbjct: 183 KKMKDKIGTAY---------YIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG--TLAQLLHESTKQPDYR 705
+ ++RE++ L +L H N+++ F +ED YL T +L E + +
Sbjct: 93 KESLLREVQLLKQLDHPNIMKLYEF--FEDKGYF---YLVGEVYTGGELFDEIISRKRFS 147
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP---------LLGEIEIS 756
R I V G+ ++H I+H D+ N+LL++ K L E S
Sbjct: 148 EVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 757 KLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
K + GTA YI PE + +V+S GV+L +L+
Sbjct: 206 KKMKDKIGTAY---------YIAPEVLHGT-YDEKCDVWSTGVILYILLS 245
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISK--LLDPSKGTASISAVAGSFGYI 778
LA+ H ++H D+ N+L D P I+I L + K + AG+ Y+
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQ-DTSP-HSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193
Query: 779 PPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
PE + VT +++S GVV+ +LT LP
Sbjct: 194 APE-VFKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 13/149 (8%)
Query: 672 FVIYEDVALL--LHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
F ++D L + Y+P G L L+ D W + + +A L +H +
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLA--LDAIHSMG 193
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTM--- 786
IH D+ N+LLD L + ++ +G G+ YI PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 787 -QVTAPGNVYSYGVVLLEILTTRLPVEED 814
+ +S GV L E+L P D
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG--TLAQLLHESTKQPDYR 705
+ ++RE++ L +L H N+++ F +ED YL T +L E + +
Sbjct: 94 KESLLREVQLLKQLDHPNIMKLYEF--FEDKGYF---YLVGEVYTGGELFDEIISRKRFS 148
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP---------LLGEIEIS 756
R I V G+ ++H I+H D+ N+LL++ K L E S
Sbjct: 149 EVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 757 KLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
K + GTA YI PE + +V+S GV+L +L+
Sbjct: 207 KKMKDKIGTAY---------YIAPEVLHGT-YDEKCDVWSTGVILYILLS 246
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 23/216 (10%)
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
SN LNL N + L +L+ L L NS+ + +LN L+L +N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKLLQLHIGS----NYLTGSIPPE 417
A +S+L+ L L N ++ + L++L +G Y++
Sbjct: 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG 194
Query: 418 IGHIRNLQIA------------------LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQL 459
+ +++ L + L +S NH P L L V N+Q+
Sbjct: 195 LFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQV 254
Query: 460 SGTIPSALKGMLSLIEVNFS-NNLLTGPVPSFVPFQ 494
S +A G+ SL+E+N + NNL + P F P +
Sbjct: 255 SLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 652 IRELEKLSKLCHDNLVRPIGFVIYEDVA----LLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+RE E L KL H N+V+ F I E+ +L+ + P G+L +L E + Y
Sbjct: 55 MREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA--YGLP 110
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVL 741
L + V G+ L I+H +I GN++
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 41/214 (19%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSK--LCHDNLVRPIGFV 673
G + V++ G ++VK S D + RE E + L H+N+ +GF+
Sbjct: 48 GRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENI---LGFI 97
Query: 674 IYEDVA-------LLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLH 726
+ + L+ +Y G+L L +T D + L I + +A GLA LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTL------DTVSCLRIVLSIASGLAHLH 151
Query: 727 --------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASI--SAVAGSFG 776
AI H D+ S N+L+ + + + ++ ++ + S + + G+
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 777 YIPPEY-AYTMQVTAPG-----NVYSYGVVLLEI 804
Y+ PE T+QV +++++G+VL E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 712 LSIAIGVAEGLAFLH--------HVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSK 763
L I + +A GLA LH AI H D+ S N+L+ + + + ++ ++ + S
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 764 GTASI--SAVAGSFGYIPPEY-AYTMQVTAPG-----NVYSYGVVLLEI 804
+ + G+ Y+ PE T+QV +++++G+VL E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP 779
+GL ++H ++H D+ GN+ ++ D + + + +++ D A ++ + Y
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-----AEMTGYVVTRWYRA 209
Query: 780 PEYAYT-MQVTAPGNVYSYGVVLLEILTTR 808
PE + M +++S G ++ E+LT +
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIP 779
+GL ++H ++H D+ GN+ ++ D + + + +++ D A ++ + Y
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-----AEMTGYVVTRWYRA 191
Query: 780 PEYAYT-MQVTAPGNVYSYGVVLLEILTTR 808
PE + M +++S G ++ E+LT +
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 20/239 (8%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQN-KMIRELEKLSKLCHDNLVRPIGFV 673
G+F V KA +++K +++ R H Q + IR LE L K DN + I +
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTMNVIHML 165
Query: 674 IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ H + L+ L+E K+ ++ P A + + L LH IIH
Sbjct: 166 --ENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 733 LDISSGNVLLDADFKPLLGEIEI-SKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
D+ N+LL + + I+ S + + I S Y PE + P
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ----SRFYRAPEVILGARYGMP 279
Query: 792 GNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+++S G +L E+LT LP ED G+ + + + G P+ +++LDA +F
Sbjct: 280 IDMWSLGCILAELLTGYPLLP-GEDEGDQLACMIELLGMPS-----QKLLDASKRAKNF 332
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 11/204 (5%)
Query: 91 LDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVGEI 150
LDL NN S F L L L L NK + + L+ L+ IS N LV EI
Sbjct: 59 LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EI 117
Query: 151 PDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQL--VGEIPDNLGSVSEL 208
P L S L + ++ N++ L N+ N L G P + +L
Sbjct: 118 PPNLPS--SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KL 174
Query: 209 ELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTG-DIPELVGHCKSLSNIRIGNNDLV 267
L + +L G IPK + + L L L N++ ++ +L+ + K L + +G+N +
Sbjct: 175 NYLRISEAKLTG-IPKDLPET--LNELHLDHNKIQAIELEDLLRYSK-LYRLGLGHNQIR 230
Query: 268 GVIPRAIGNVSGLTYFEADNNNLS 291
+ ++ + L DNN LS
Sbjct: 231 MIENGSLSFLPTLRELHLDNNKLS 254
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 32/208 (15%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG--TLAQLLHESTKQPDYR 705
+ ++RE++ L +L H N+++ F +ED YL T +L E + +
Sbjct: 76 KESLLREVQLLKQLDHPNIMKLYEF--FEDKGYF---YLVGEVYTGGELFDEIISRKRFS 130
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP---------LLGEIEIS 756
R I V G+ ++H I+H D+ N+LL++ K L E S
Sbjct: 131 EVDAAR--IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 188
Query: 757 KLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPV----E 812
K + GTA YI PE + +V+S GV+L +L+ P E
Sbjct: 189 KKMKDKIGTAY---------YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 238
Query: 813 EDFGEGVDLVKWVHGAPARGETPEQILD 840
D + V+ K+ P + E D
Sbjct: 239 YDILKKVEKGKYTFELPQWKKVSESAKD 266
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVL-LDADFKP---LLGEIEISKLLDPSKGTASI 768
++ + + + +LH ++H D+ N+L +D P + + +K L G
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 769 SAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGA 828
+F + PE A +++S GV+L +LT P F G D
Sbjct: 180 PCYTANF--VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP----FANGPD-------- 225
Query: 829 PARGETPEQILDARLSTVSF 848
+TPE+IL AR+ + F
Sbjct: 226 ----DTPEEIL-ARIGSGKF 240
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
K +DLS N +F N SEL++LDLS + + + L L ++ N +
Sbjct: 35 KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSVSE 207
P L LE+ KL F +G L L+ N + ++P +++
Sbjct: 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTN 154
Query: 208 LELLNLHSNQLE 219
L ++L N ++
Sbjct: 155 LVHVDLSYNYIQ 166
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 85 LKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISN 143
L +L L ++ N+F T+ + F N + L FLDLS + + +L L+ N+S+
Sbjct: 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGS 173
N L+ L L S N++ S
Sbjct: 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIETS 536
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 68 LDLSRLQLRG-NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVI 126
LDLS+ QL + + L L+ L++S+N S + L L LD S N+ I
Sbjct: 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR----I 533
Query: 127 PRELGSL----KDLRFFNISNN--VLVGEIPDELKSLEKLEDFQVSSNKLNGSIP 175
G L K L FFN++NN + E L+ +++ + F V+ ++ + P
Sbjct: 534 ETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTCATP 588
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKD 135
+ +L LK+L++++N S +P+ F NL+ L +DLS N + +L L++
Sbjct: 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 178
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 20/239 (8%)
Query: 616 GTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQN-KMIRELEKLSKLCHDNLVRPIGFV 673
G+F V KA +++K +++ R H Q + IR LE L K DN + I +
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTMNVIHML 165
Query: 674 IYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP-DWPTRLSIAIGVAEGLAFLHHVAIIH 732
E+ H + L+ L+E K+ ++ P A + + L LH IIH
Sbjct: 166 --ENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 733 LDISSGNVLLDADFKPLLGEIEI-SKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
D+ N+LL + + I+ S + + I S Y PE + P
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ----SRFYRAPEVILGARYGMP 279
Query: 792 GNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHGAPARGETPEQILDARLSTVSF 848
+++S G +L E+LT LP ED G+ + + + G P+ +++LDA +F
Sbjct: 280 IDMWSLGCILAELLTGYPLLP-GEDEGDQLACMIELLGMPS-----QKLLDASKRAKNF 332
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF-- 775
V+ G+ +L +H D+++ NVLL + + +SK L + + G +
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPV 194
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE + ++ +V+S+GV++ E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 85 LKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISN 143
L +L L ++ N+F T+ + F N + L FLDLS + + +L L+ N+S+
Sbjct: 442 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 501
Query: 144 NVLVGEIPDELKSLEKLEDFQVSSNKLNGS 173
N L+ L L S N++ S
Sbjct: 502 NNLLFLDSSHYNQLYSLSTLDCSFNRIETS 531
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 89 KRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNVLVG 148
K +DLS N +F N SEL++LDLS + + + L L ++ N +
Sbjct: 30 KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 89
Query: 149 EIPDELKSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVG-EIPDNLGSVSE 207
P L LE+ KL F +G L L+ N + ++P +++
Sbjct: 90 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTN 149
Query: 208 LELLNLHSNQLE 219
L ++L N ++
Sbjct: 150 LVHVDLSYNYIQ 161
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 68 LDLSRLQLRG-NITLVSELKALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVI 126
LDLS+ QL + + L L+ L++S+N S + L L LD S N+ I
Sbjct: 473 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR----I 528
Query: 127 PRELGSL----KDLRFFNISNN--VLVGEIPDELKSLEKLEDFQVSSNKLNGSIP 175
G L K L FFN++NN + E L+ +++ + F V+ ++ + P
Sbjct: 529 ETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTCATP 583
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 82 VSELKALKRLDLSNNAF-SGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKD 135
+ +L LK+L++++N S +P+ F NL+ L +DLS N + +L L++
Sbjct: 119 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 173
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 29/143 (20%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKS--MDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
I C F TV G+ ++VK+L ++T H + REL L + H N++ +
Sbjct: 39 IVCAAFDTVL------GINVAVKKLSRPFQNQT---HAKRAYRELVLLKCVNHKNIISLL 89
Query: 671 GFVI-------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAI-GVAEGL 722
++DV L++ L + L Q++H R+S + + G+
Sbjct: 90 NVFTPQKTLEEFQDVYLVME--LMDANLCQVIHMELDH--------ERMSYLLYQMLCGI 139
Query: 723 AFLHHVAIIHLDISSGNVLLDAD 745
LH IIH D+ N+++ +D
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 710 TRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASIS 769
RL + + + A L H ++H D N+LLD L E L+ G +++S
Sbjct: 192 ARLQLTLQLIRLAASLQHYGLVHADFQVRNILLDQRGGVFLTGFE--HLV--RDGASAVS 247
Query: 770 AVAGSFGYIPPEYA----------YTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGV 819
+ G+ PPE + +T P + ++ G+ + I LP ED G
Sbjct: 248 PIGR--GFAPPETTAERMLPYRQHHPTLMTFPFDTWTLGLAIYWIWCADLPNTEDAELGG 305
Query: 820 DLVKWVH 826
++W++
Sbjct: 306 --IEWIY 310
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 65/148 (43%), Gaps = 28/148 (18%)
Query: 701 QPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDA-------------DFK 747
Q +Y P +S+ +A G+A LH + IIH D+ N+L+ + +
Sbjct: 112 QKEYNP-----ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 748 PLLGEIEISKLLDPSKGT--ASISAVAGSFGYIPPE-------YAYTMQVTAPGNVYSYG 798
L+ + + K LD + +++ +G+ G+ PE ++T +++S G
Sbjct: 167 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 799 VVLLEILTT-RLPVEEDFGEGVDLVKWV 825
V IL+ + P + + ++++ +
Sbjct: 227 CVFYYILSKGKHPFGDKYSRESNIIRGI 254
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 714 IAIGVAEGLAFLHHVA-IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
I V +++H+ I H D+ N+L+D + + L + S+ + K I
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSR 211
Query: 773 GSFGYIPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLP 810
G++ ++PPE+ ++ + + G +++S G+ L + +P
Sbjct: 212 GTYEFMPPEF-FSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+ +GL +LH IH DI + NVLL L + ++ L ++ + G+ +
Sbjct: 129 ILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFW 186
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
+ PE + +++S G+ +E+ P
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+ +GL +LH IH DI + NVLL + L + ++ L ++ + G+ +
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFW 170
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + +++S G+ +E+ P E
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 206
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI- 674
G+ + Y A + + +VK+L +++IH + REL L L H+N++ +
Sbjct: 42 GSVCSAYDARLRQKV--AVKKLSRPFQSLIH-ARRTYRELRLLKHLKHENVIGLLDVFTP 98
Query: 675 ---YED------VALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
ED V L+ L N +Q L + Q + + GL ++
Sbjct: 99 ATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ-----------FLVYQLLRGLKYI 147
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT 785
H IIH D+ NV ++ D E+ I + ++ + Y PE
Sbjct: 148 HSAGIIHRDLKPSNVAVNED-----SELRILDFGLARQADEEMTGYVATRWYRAPEIMLN 202
Query: 786 -MQVTAPGNVYSYGVVLLEIL 805
M +++S G ++ E+L
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVL-LDADFKP---LLGEIEISKLLDPSKGTASI 768
++ + + + +LH ++H D+ N+L +D P + + +K L G
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 769 SAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHGA 828
+F + PE A +++S GV+L LT P F G D
Sbjct: 180 PCYTANF--VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP----FANGPD-------- 225
Query: 829 PARGETPEQILDARLSTVSF 848
+TPE+IL AR+ + F
Sbjct: 226 ----DTPEEIL-ARIGSGKF 240
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+ +GL +LH IH DI + NVLL + L + ++ L ++ + G+ +
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFW 190
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + +++S G+ +E+ P E
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 226
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLL-----GEIEISKLLDPSKGTASISAVAGSF 775
G+++ H + + H D+ N LLD P L G + S L K T G+
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST------VGTP 180
Query: 776 GYIPPEYAYTMQVTAP-GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVH 826
YI PE + +V+S GV L +L P ED E + K +H
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKTIH 231
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+ +GL +LH IH DI + NVLL + L + ++ L ++ + G+ +
Sbjct: 128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFW 185
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + +++S G+ +E+ P E
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 29/143 (20%)
Query: 613 IYCGTFSTVYKAVMPSGLILSVKRLKS--MDRTIIHHQNKMIRELEKLSKLCHDNLVRPI 670
I C F TV G+ ++VK+L ++T H + REL L + H N++ +
Sbjct: 37 IVCAAFDTVL------GINVAVKKLSRPFQNQT---HAKRAYRELVLLKCVNHKNIISLL 87
Query: 671 GFVI-------YEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAI-GVAEGL 722
++DV L++ L + L Q++H R+S + + G+
Sbjct: 88 NVFTPQKTLEEFQDVYLVME--LMDANLCQVIHMELDH--------ERMSYLLYQMLCGI 137
Query: 723 AFLHHVAIIHLDISSGNVLLDAD 745
LH IIH D+ N+++ +D
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSD 160
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 710 TRLSIAIGVAE---GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA 766
T + I V E L LH + II+ DI N+LLD++ +L + +SK + T
Sbjct: 157 TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-TE 215
Query: 767 SISAVAGSFGYIPPEYAYTMQVTAPGNV--YSYGVVLLEILTTRLPVEED 814
G+ Y+ P+ V +S GV++ E+LT P D
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
+ +GL +LH IH DI + NVLL + L + ++ L ++ + G+ +
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFW 170
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEE 813
+ PE + +++S G+ +E+ P E
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISK--LLDPSKGT-ASISAVAGSFG 776
+G+ +LH+ IIH DI N+L+ D G I+I+ + + KG+ A +S G+
Sbjct: 148 KGIEYLHYQKIIHRDIKPSNLLVGED-----GHIKIADFGVSNEFKGSDALLSNTVGTPA 202
Query: 777 YIPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLP 810
++ PE + G +V++ GV L + + P
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF-- 775
V+ G+ +L +H D+++ NVLL + + +SK L + + G +
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPV 536
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE + ++ +V+S+GV++ E +
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 30/201 (14%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI- 674
G+ + Y A + + +VK+L +++IH + REL L L H+N++ +
Sbjct: 34 GSVCSAYDARLRQKV--AVKKLSRPFQSLIH-ARRTYRELRLLKHLKHENVIGLLDVFTP 90
Query: 675 ---YED------VALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
ED V L+ L N Q L + Q + + GL ++
Sbjct: 91 ATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ-----------FLVYQLLRGLKYI 139
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT 785
H IIH D+ NV ++ D + + + +++ D ++ + Y PE
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD-----EEMTGYVATRWYRAPEIMLN 194
Query: 786 -MQVTAPGNVYSYGVVLLEIL 805
M +++S G ++ E+L
Sbjct: 195 WMHYNQTVDIWSVGCIMAELL 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVI- 674
G+ + Y A + + +VK+L +++IH + REL L L H+N++ +
Sbjct: 42 GSVCSAYDARLRQKV--AVKKLSRPFQSLIH-ARRTYRELRLLKHLKHENVIGLLDVFTP 98
Query: 675 ---YED------VALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFL 725
ED V L+ L N Q L + Q + + GL ++
Sbjct: 99 ATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ-----------FLVYQLLRGLKYI 147
Query: 726 HHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYT 785
H IIH D+ NV ++ D E+ I + ++ + Y PE
Sbjct: 148 HSAGIIHRDLKPSNVAVNED-----SELRILDFGLARQADEEMTGYVATRWYRAPEIMLN 202
Query: 786 -MQVTAPGNVYSYGVVLLEIL 805
M +++S G ++ E+L
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLL-----GEIEISKLLDPSKGTASISAVAGSF 775
G+++ H + + H D+ N LLD P L G + S L K T G+
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT------VGTP 180
Query: 776 GYIPPEYAYTMQVTAP-GNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVH 826
YI PE + +V+S GV L +L P ED E + K +H
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKTIH 231
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSF-- 775
V+ G+ +L +H D+++ NVLL + + +SK L + + G +
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPV 537
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE + ++ +V+S+GV++ E +
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 12/178 (6%)
Query: 636 RLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVRPIGFVIYEDVAL--LLHNYLPNGTL-A 692
R ++ I ++ E+ L L H N+++ F ++ED L+ + G L
Sbjct: 78 RYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL--FDVFEDKKYFYLVTEFYEGGELFE 135
Query: 693 QLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGE 752
Q+++ ++ D +I + G+ +LH I+H DI N+LL+ L +
Sbjct: 136 QIINR------HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK 189
Query: 753 IEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
I L + G+ YI PE + +V+S GV++ +L P
Sbjct: 190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 610 SNMIYCGTFSTVYKAVMPSGLILSVKRL---KSMDRTIIHHQN-----KMIRELEKLSKL 661
I G++ V V G+ +++KR+ S RT+ + +++RE+ L+
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 662 CHDNLV--RPIGFVIYEDVA---LLLHNYLPNGTLAQLLHE-----STKQPDYRPDWPTR 711
H N++ R I FV +E+ A L L L LAQ++H+ S + Y
Sbjct: 87 HHPNILGLRDI-FVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY------- 138
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ GL LH ++H D+ GN+LL + + + +++ A+ +
Sbjct: 139 --FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHY 193
Query: 772 AGSFGYIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G V+ E+ +
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 610 SNMIYCGTFSTVYKAVMPSGLILSVKRL---KSMDRTIIHHQN-----KMIRELEKLSKL 661
I G++ V V G+ +++KR+ S RT+ + +++RE+ L+
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 662 CHDNLV--RPIGFVIYEDVA---LLLHNYLPNGTLAQLLHE-----STKQPDYRPDWPTR 711
H N++ R I FV +E+ A L L L LAQ++H+ S + Y
Sbjct: 87 HHPNILGLRDI-FVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY------- 138
Query: 712 LSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAV 771
+ GL LH ++H D+ GN+LL + + + +++ A+ +
Sbjct: 139 --FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHY 193
Query: 772 AGSFGYIPPEYAYTMQ-VTAPGNVYSYGVVLLEILTTR 808
Y PE + T +++S G V+ E+ +
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 16/201 (7%)
Query: 652 IRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRP-DWPT 710
IR LE L K DN + I + E+ H + L+ L+E K+ ++ P
Sbjct: 144 IRILEHLRKQDKDNTMNVIHML--ENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL 201
Query: 711 RLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI-SKLLDPSKGTASIS 769
A + + L LH IIH D+ N+LL + + I+ S + + I
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQ 261
Query: 770 AVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTR--LPVEEDFGEGVDLVKWVHG 827
S Y PE + P +++S G +L E+LT LP ED G+ + + + G
Sbjct: 262 ----SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP-GEDEGDQLACMIELLG 316
Query: 828 APARGETPEQILDARLSTVSF 848
P +++LDA +F
Sbjct: 317 MPX-----QKLLDASKRAKNF 332
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLL-----DADFKPLLGEIEISKLLDPSKGTASISAVA 772
+ E +A+LH I+H D+ N+L DA K + + +SK+++ + V
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLK--IADFGLSKIVEHQ---VLMKTVC 211
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGE 817
G+ GY PE +++S G++ +L P ++ G+
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 32/203 (15%)
Query: 616 GTFSTVYKAV-MPSGLILSVKR-LKSMDRTIIHHQNKMIRELEKLSKLCHDNLV------ 667
G++ V K +G I+++K+ L+S D ++ + +RE++ L +L H+NLV
Sbjct: 36 GSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV--KKIAMREIKLLKQLRHENLVNLLEVC 93
Query: 668 --RPIGFVIYEDVALLLHNYL---PNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGL 722
+ ++++E V + + L PNG Q++ + Q + G+
Sbjct: 94 KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ----------------IINGI 137
Query: 723 AFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEY 782
F H IIH DI N+L+ L + ++ L + G VA + P
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELL 196
Query: 783 AYTMQVTAPGNVYSYGVVLLEIL 805
++ +V++ G ++ E+
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|2HQ6|A Chain A, Structure Of The Cyclophilin_cecyp16-like Domain Of The
Serologically Defined Colon Cancer Antigen 10 From Homo
Sapiens
Length = 185
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 437 GSLPPELGK-LDKLVSFDVSNNQLSGTIPSALKGMLSL-IEVNFSNNLLTGPVPSFVPFQ 494
GS PP GK L K + D+ S P A + + L +E + N + VP F+
Sbjct: 18 GSEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQG 77
Query: 495 KSPNSSFFGNKGLCGEPLSFSCGNANGPDSKNYRHRVSYRIILAVVGSG 543
P + G + + G P D + R R + R ++A+ +G
Sbjct: 78 GDPTGTGSGGESIYGAPFK---------DEFHSRLRFNRRGLVAMANAG 117
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 167 SNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSI 226
S K S+P G T +V Y+NQ+ P +++L L+L +NQL +P +
Sbjct: 25 SGKSLASVP--TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGV 81
Query: 227 FAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNN 264
F +L L L N+L + KSL++I + NN
Sbjct: 82 FDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 120
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 615 CGTFSTVYKAV-MPSGLILSVKRLKSMDRTIIHHQNKMIRELEKLSKLCHDNLVR----- 668
CG V+ AV +++K++ D + H +RE++ + +L HDN+V+
Sbjct: 21 CGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA---LREIKIIRRLDHDNIVKVFEIL 77
Query: 669 -PIGFVIYEDVALL--------LHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVA 719
P G + +DV L + Y+ LA +L + ++ RL +
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEH-----ARL-FMYQLL 130
Query: 720 EGLAFLHHVAIIHLDISSGNVLLDA-DFKPLLGEIEISKLLDPSKGTASISAVAGSFGYI 778
GL ++H ++H D+ N+ ++ D +G+ +++++DP S G +
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG----HLSEGLV 186
Query: 779 PPEYAYTMQVTAPGN------VYSYGVVLLEILTTR 808
Y + +P N +++ G + E+LT +
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLL---DADFKPLLGEIEISKLLDPSKGTASISAVAGS 774
V + +LH I+H D+ N+L + + K ++ + +SK+ + +S G+
Sbjct: 115 VLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGT 170
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEED 814
GY+ PE + + +S GV+ +L P E+
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDA--DFKPL-LGEIEISKLLDPSKGTASISAVAGS 774
+ E L + H IIH D+ NVLL + + P+ LG+ ++ L S A G+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA--GGRVGT 196
Query: 775 FGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP---VEEDFGEGV 819
++ PE P +V+ GV+L +L+ LP +E EG+
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGI 244
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 172 GSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFAS-G 230
S+P G T +V Y NQ+ P S+++L LNL NQL +P +F
Sbjct: 32 ASVP--AGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTA-LPVGVFDKLT 88
Query: 231 KLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNN 264
KL L L N+L + + KSL++I + NN
Sbjct: 89 KLTHLALHINQLKSIPMGVFDNLKSLTHIYLFNN 122
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA--SISAVAGSFGYI 778
GL ++H I+H D+ + NVL+ D L + +++ +K + + Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 779 PPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
PPE + P +++ G ++ E+ TR P+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPI 229
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 14/202 (6%)
Query: 616 GTFSTVYKAVMPSG----LILSVKRLKSMDRTIIHHQN--KMIRELEKLSKLCHDNLVRP 669
G F V+ AV ++ +K+ K ++ I K+ E+ LS++ H N+++
Sbjct: 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKV 94
Query: 670 IGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVA 729
+ I+E+ +G+ L + P R D P I + + +L
Sbjct: 95 LD--IFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 730 IIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVT 789
IIH DI N+++ DF L + + L+ K G+ Y PE
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYR 207
Query: 790 APG-NVYSYGVVLLEILTTRLP 810
P ++S GV L ++ P
Sbjct: 208 GPELEMWSLGVTLYTLVFEENP 229
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 163 FQVSSNKLNGSIPFWV-GNLTNLRVFTAYENQLVGEIPDNL-GSVSELELLNLHSNQLEG 220
++ SNKL S+P V LT L + +NQ + +PD + +++L +L LH N+L+
Sbjct: 33 LELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQ-IQSLPDGVFDKLTKLTILYLHENKLQS 90
Query: 221 PIPKSIFAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDLVGVIPR 272
+P +F +L+ L L N+L + SL I + N PR
Sbjct: 91 -LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 295 VPEFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNK 354
P CSN +++ G T IP L + I E+ L +N++ P + K L +
Sbjct: 5 CPAACTCSN-NIVDCRGKGLTE-IPTNLPETIT--EIRLEQNTIKVIPPGAFSPYKKLRR 60
Query: 355 LDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEI 394
+DLSNN+ + P+A + L L+L N + E+P +
Sbjct: 61 IDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSL 99
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 86 KALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNV 145
+ + + L N P AF +L +DLS N+ + P L+ L + N
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 146 LVGEIPDEL-KSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGS 204
+ E+P L + L L+ +++NK+N +L NL + + Y+N+L
Sbjct: 92 IT-ELPKSLFEGLFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150
Query: 205 VSELELLNLHSN 216
+ ++ ++L N
Sbjct: 151 LRAIQTMHLAQN 162
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 130 LGSLKDLRFFNISNNVLVGEIPDEL-KSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFT 188
L +++L + N+ E+P L LE LE + SNKL G + L+
Sbjct: 143 LTDMRNLSHLELRANI--EEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLN 200
Query: 189 AYENQLVGEIPDNL-GSVSELELLNLHSNQLEGPIPKSIFAS 229
NQL +PD + ++ L+ + LH+N + P+ + S
Sbjct: 201 LASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 241
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 200 DNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNRLTGDIPELVGHCKSLSNI 259
DNLG + + H ++L G L+ T RLT L+ ++LS++
Sbjct: 108 DNLG----MNITRQHLDRLHG-----------LKRFRFTTRRLTHIPANLLTDMRNLSHL 152
Query: 260 RIGNNDLVGVIPRAI-GNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLASNGFTGVI 318
+ N + +P + ++ L E +N L F + L LNLASN V
Sbjct: 153 ELRAN--IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVP 210
Query: 319 PPELGQLINLQELILYENSLFGEIPKSILACKNLNK 354
+L +LQ++ L+ N P+ + LNK
Sbjct: 211 DGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 246
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA--SISAVAGSFGYI 778
GL ++H I+H D+ + NVL+ D L + +++ +K + + Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 779 PPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
PPE + P +++ G ++ E + TR P+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPI 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA--SISAVAGSFGYI 778
GL ++H I+H D+ + NVL+ D L + +++ +K + + Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 779 PPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
PPE + P +++ G ++ E + TR P+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTA--SISAVAGSFGYI 778
GL ++H I+H D+ + NVL+ D L + +++ +K + + Y
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 779 PPEYAYTMQVTAPG-NVYSYGVVLLEILTTRLPV 811
PPE + P +++ G ++ E + TR P+
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPI 228
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 295 VPEFSQCSNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNK 354
P CSN +++ G T IP L + I E+ L +N++ P + K L +
Sbjct: 5 CPAACTCSN-NIVDCRGKGLTE-IPTNLPETIT--EIRLEQNTIKVIPPGAFSPYKKLRR 60
Query: 355 LDLSNNRFNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEI 394
+DLSNN+ + P+A + L L+L N + E+P +
Sbjct: 61 IDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSL 99
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 86 KALKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNISNNV 145
+ + + L N P AF +L +DLS N+ + P L+ L + N
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 146 LVGEIPDEL-KSLEKLEDFQVSSNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGS 204
+ E+P L + L L+ +++NK+N +L NL + + Y+N+L
Sbjct: 92 IT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150
Query: 205 VSELELLNLHSN 216
+ ++ ++L N
Sbjct: 151 LRAIQTMHLAQN 162
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 616 GTFSTVYKAVMPSGLILSVKRLKSMDRTIIHHQN----KMIRELEKLSKLCHDNLVRPIG 671
GT++TVYK S L ++ LK + + H+ IRE+ L L H N+V
Sbjct: 13 GTYATVYKG--KSKLTDNLVALKEIR---LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 672 FVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRLSIAIGVAEGLAFLHHVAII 731
+ E L+ YL + L Q L + + +L + + GLA+ H ++
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHN---VKLFL-FQLLRGLAYCHRQKVL 122
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEY-----AYTM 786
H D+ N+L++ + L + +++ S T + + Y PP+ Y+
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 787 QVTAPGNVYSYGVVLLEILTTR 808
Q+ +++ G + E+ T R
Sbjct: 181 QI----DMWGVGCIFYEMATGR 198
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 307 LNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSIL-ACKNLNKLDLSNNRFNGT 365
L L +N T + P L+NLQ+L N L IP + L +LDL++N
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKSI 96
Query: 366 IPNAICDMSRLQYLLLGQN 384
A ++ L ++ L N
Sbjct: 97 PRGAFDNLKSLTHIYLYNN 115
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 110
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 111 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 170 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE--ISKLLDPSKGTASISAVAGSF 775
V +GL +H +HLD+ N++ L I+ ++ LDP + S+ G+
Sbjct: 158 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTA 214
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE A V +++S GV+ +L+
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 8/158 (5%)
Query: 653 RELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPDWPTRL 712
+E+ LS+ + R G + ++ YL G+ LL + Y
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA------ 119
Query: 713 SIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVA 772
+I + +GL +LH IH DI + NVLL L + ++ L ++ +
Sbjct: 120 TILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNXFV 177
Query: 773 GSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
G+ ++ PE +++S G+ +E+ P
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE--ISKLLDPSKGTASISAVAGSF 775
V +GL +H +HLD+ N++ L I+ ++ LDP + S+ G+
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTA 320
Query: 776 GYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
+ PE A V +++S GV+ +L+
Sbjct: 321 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 104
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 105 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 164 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 116
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 117 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 176 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 126
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 186 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 106
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 107 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 166 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 110
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 111 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 170 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNGTLAQLLHESTKQPDYRPD 707
+++++ E + +L + +VR IG E L++ G L + L ++ D
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME-MAELGPLNKYLQQNRHVKD---- 124
Query: 708 WPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTAS 767
+ + V+ G+ +L +H D+++ NVLL + + +SK L +
Sbjct: 125 -KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 768 ISAVAGSFGYIP-----PEYAYTMQVTAPGNVYSYGVVLLEILT 806
A + G P PE + ++ +V+S+GV++ E +
Sbjct: 184 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 28/170 (16%)
Query: 648 QNKMIRELEKLSKLCHDNLVRPIGFVIYEDVALLLHNYLPNG--TLAQLLHESTKQPDYR 705
+ ++RE++ L +L H N+ + F +ED YL T +L E + +
Sbjct: 70 KESLLREVQLLKQLDHPNIXKLYEF--FEDKGYF---YLVGEVYTGGELFDEIISRKRFS 124
Query: 706 PDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDADFKP---------LLGEIEIS 756
R I V G+ + H I+H D+ N+LL++ K L E S
Sbjct: 125 EVDAAR--IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 757 KLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILT 806
K GTA YI PE + +V+S GV+L +L+
Sbjct: 183 KKXKDKIGTAY---------YIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
V G +LH I+H D+ N+LL++ + L +I L + + G+ Y
Sbjct: 113 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
I PE + +V+S GV+L +L P
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 732 HLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAP 791
H D+ N+L+ AD L + I+ K T + G+ Y PE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYXAPERFSESHATYR 215
Query: 792 GNVYSYGVVLLEILTTRLPVEED 814
++Y+ VL E LT P + D
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGD 238
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI---SKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 307
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI---SKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 321
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 718 VAEGLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEISKLLDPSKGTASISAVAGSFGY 777
V G +LH I+H D+ N+LL++ + L +I L + + G+ Y
Sbjct: 130 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 778 IPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLP 810
I PE + +V+S GV+L +L P
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3F9P|D Chain D, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3ZS0|C Chain C, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS0|D Chain D, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS1|C Chain C, Human Myeloperoxidase Inactivated By Tx5
pdb|3ZS1|D Chain D, Human Myeloperoxidase Inactivated By Tx5
Length = 467
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 270 IPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLAS 311
+PR I + +G+T +N +S +F CS L LNLAS
Sbjct: 421 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLAS 462
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 167 SNKLNGSIPFWVGNLTNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSI 226
S K S+P G T +V Y+NQ+ P +++L L+L +NQL +P +
Sbjct: 17 SGKSLASVP--TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGV 73
Query: 227 FAS-GKLEVLVLTQNRLTGDIPELVGHCKSLSNIRIGNNDL------VGVIPRAIGNVSG 279
F +L L L N+L + KSL++I + NN + + R I G
Sbjct: 74 FDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPG 133
Query: 280 LTY----FEADNNNLSGEIVP 296
L + + D+ SG P
Sbjct: 134 LVFGYLNLDPDSARCSGTNTP 154
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MYP|D Chain D, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MHL|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
pdb|1MHL|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
Length = 466
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 270 IPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLAS 311
+PR I + +G+T +N +S +F CS L LNLAS
Sbjct: 421 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLAS 462
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1CXP|D Chain D, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1D2V|C Chain C, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D2V|D Chain D, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D7W|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D7W|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D5L|C Chain C, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D5L|D Chain D, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1DNU|C Chain C, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNU|D Chain D, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNW|C Chain C, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|1DNW|D Chain D, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|4DL1|C Chain C, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|D Chain D, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|G Chain G, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|H Chain H, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|K Chain K, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|L Chain L, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|O Chain O, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|P Chain P, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
Length = 466
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 270 IPRAIGNVSGLTYFEADNNNLSGEIVPEFSQCSNLTLLNLAS 311
+PR I + +G+T +N +S +F CS L LNLAS
Sbjct: 421 LPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLAS 462
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 109/298 (36%), Gaps = 30/298 (10%)
Query: 182 TNLRVFTAYENQLVGEIPDNLGSVSELELLNLHSNQLEGPIPKSIFASGKLEVLVLTQNR 241
+N+ V NQL P N S+L +L+ N + P+ L+VL L N
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 242 LTGDIPELVGHCKSLSNIRIGNNDLVGVIPRAIGNVSGLTYFEADNNNLSGEIVPEFSQC 301
L+ + C +L+ + + +N + + N L + +N LS + Q
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 302 SNLTLLNLASNGFTGVIPPELGQLINLQELILYENSLFGEIPKSILACKNLNKLDLSNNR 361
NL L LA N + EL L +L KLDLS+N
Sbjct: 145 ENLQELLLAKNKILALRSEEL----------------------EFLGNSSLRKLDLSSNP 182
Query: 362 FNGTIPNAICDMSRLQYLLLGQNSLKGEIPHEIGNCMKL-----LQLHIGSNYLTGSIPP 416
P + +L LLL L + ++ C +L L + +N L +
Sbjct: 183 LKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKL--CWELSNTSIQNLSLANNQLLATSES 240
Query: 417 EIGHIRNLQIA-LNLSFNHLHGSLPPELGKLDKLVSFDVSNNQLSGTIPSALKGMLSL 473
++ + L+LS+N+LH L L + N + P + G+ +L
Sbjct: 241 TFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNL 298
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 88 LKRLDLSNNAFSGTIPSAFGNLSELEFLDLSLNKFGGVIPRELGSLKDLRFFNI 141
L +LDLS N +F L L +L L N + PR L +LR+ ++
Sbjct: 250 LTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 303
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI---SKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 182
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI---SKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 182
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI---SKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 182
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIEI---SKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 181
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 721 GLAFLHHVAIIHLDISSGNVLLDADFKPLLGEIE---ISKLLDPSKGTASISAVAGSFGY 777
+ +LH IIH D+ NVLL + + L +I SK+L T+ + + G+ Y
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTY 188
Query: 778 IPPEYAYTMQVTAPG---NVYSYGVVLLEILTTRLPVEE 813
+ PE ++ + +S GV+L L+ P E
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,896,256
Number of Sequences: 62578
Number of extensions: 1112726
Number of successful extensions: 5336
Number of sequences better than 100.0: 971
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 699
Number of HSP's that attempted gapping in prelim test: 3447
Number of HSP's gapped (non-prelim): 1451
length of query: 888
length of database: 14,973,337
effective HSP length: 107
effective length of query: 781
effective length of database: 8,277,491
effective search space: 6464720471
effective search space used: 6464720471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)