BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002722
(888 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana GN=MSH2
PE=1 SV=1
Length = 937
Score = 1463 bits (3787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/863 (79%), Positives = 789/863 (91%), Gaps = 2/863 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
+EQNKLPELKLDAKQA+GFLSFYKTLPNDTRAVRFFDR+DYYTAHGEN+ FIAKTYYHTT
Sbjct: 6 EEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG+GS+ALSSVS+S+NMFETIARDLLLER DHT+ELYEGSGSNWRLVK+G+PGN+
Sbjct: 66 TALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTGSPGNI 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANNEMQDTPV+V++FP+F + C IG+ YVDLT+RVLGLAEFLDDS FTN+E
Sbjct: 126 GSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSRFTNLE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
S+L+ALG KEC+ P E+ KS+ECK+L D+L RC VM+TERKK EFK RDL DL RLV+G
Sbjct: 186 SSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
++EPVRDLVSGF++A ALGALLS++ELLS+E NYGN+ IR+Y + +MRLDSAAMRALN
Sbjct: 246 NIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+NEI RLDIVQ FV++
Sbjct: 306 VMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAG 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISD+ERL+ +LE+RR GLQ I+KLYQS+IRLP+I++A+QQY G+F+SLI
Sbjct: 366 LRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFASLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
ERYL LE+L+D DHL KFI LVE SVDLDQLENGEYMISSSYDT L++LK+++E LE+
Sbjct: 426 SERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQKELLEQ 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH LHK+TA +LDL VDKALKLDK QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG
Sbjct: 486 QIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQ V+++Y++CQKELV+RV++T +FSE+F+ LA +LSE+DVLLSF
Sbjct: 546 VKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSF 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLA+SCPTPY RP+I D GDI+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSWFQI+T
Sbjct: 606 ADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGV +LMAQVGSFVPCD+ASIS+RDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 666 GPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGA+D+SLIIIDELGRGTSTYDGFGLAWAICEHLV+ RAPTLFATHFHELT
Sbjct: 726 MLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELT 785
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
ALA AN + VGVAN+HVSAHID+ SRKLTMLYKVEPGACDQSFGIHVAEFANFP
Sbjct: 786 ALAQ--ANSEVSGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFP 843
Query: 843 ESVVTLAREKAAELEDFTPSAVI 865
ESVV LAREKAAELEDF+PS++I
Sbjct: 844 ESVVALAREKAAELEDFSPSSMI 866
>sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays GN=MUS1 PE=3 SV=1
Length = 942
Score = 1320 bits (3415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/870 (72%), Positives = 729/870 (83%), Gaps = 1/870 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
E KLPE KLDA+QA+GF+SF+K LP D RAVR FDRRDYYTAHGENATFIA+TYYHT +
Sbjct: 9 EGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIARTYYHTMS 68
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG+ SD + S SVSK MFETIAR++LLERTD TLELYEGSGSNWRL KSGTPGN+G
Sbjct: 69 ALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTPGNIG 128
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+ED+LFANN+M+D+PVIVALFP RE+ +GL ++D+T R LGLAEF +DS FTNVES
Sbjct: 129 SFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRFTNVES 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGCKECLLP + KS + L+D ++ C V+LTE+KK +FK+RDL QDL R++RGS
Sbjct: 189 ALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGRIIRGS 248
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
VEPVRDL+S F+ A G LGALLSYAELL+D++NYGNY I KY+L+ YMRLDSAA+RALN+
Sbjct: 249 VEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAVRALNI 308
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
E KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDVNEIN RLD+VQAFV+D L
Sbjct: 309 AEGKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPEL 368
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
RQ LRQ LKRISDI+RL H+L K+ A LQ +VKLYQS R+PYI+ LQQY GQFS+LI+
Sbjct: 369 RQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFSTLIR 428
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
++L+PLE + +F +LVET++DL QLENGEY IS Y + L LK+E +E
Sbjct: 429 SKFLEPLEEWMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSVVENH 488
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I++LH TASDLDL VDK LKL+KG+ GHVFR++KKEE K+RKKLT ++++ETRKDGV
Sbjct: 489 INNLHVDTASDLDLSVDKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGV 547
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFTN+KLK L DQYQ + EY +CQK++V V++ + TFSE+F++ A +LSELDVL SFA
Sbjct: 548 KFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFA 607
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA+SCP PY RPDI D GDI+L GSRHPC+EAQD VNFIPNDC L+RGKSWFQIITG
Sbjct: 608 DLATSCPVPYVRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITG 667
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVN+LMAQVGSFVPCD+ASISVRDCIFARVGAGDCQL GVSTFMQEM
Sbjct: 668 PNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEM 727
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGA+D+SLIIIDELGRGTSTYDGFGLAWAICEHL+E RAPTLFATHFHELTA
Sbjct: 728 LETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTA 787
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LAH N +E +GVANYHV AHID SRKLTMLYKVEPGACDQSFGIHVAEFANFPE
Sbjct: 788 LAHRNDDEHQHISDIGVANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 847
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEV 873
+VV LA+ KAAELEDF+ + SDD K EV
Sbjct: 848 AVVALAKSKAAELEDFSTTPTFSDDLKDEV 877
>sp|Q5XXB5|MSH2_CHLAE DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops GN=MSH2
PE=2 SV=1
Length = 933
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/868 (44%), Positives = 556/868 (64%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++++P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>sp|Q3MHE4|MSH2_BOVIN DNA mismatch repair protein Msh2 OS=Bos taurus GN=MSH2 PE=2 SV=1
Length = 934
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/864 (44%), Positives = 554/864 (64%), Gaps = 33/864 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+LD+ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC++P + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVMPG-GETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ+L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQALFLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++ + P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDF 859
AE ANFP V+ A++KA ELE+F
Sbjct: 831 AELANFPRHVIECAKQKALELEEF 854
>sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sapiens GN=MSH2 PE=1 SV=1
Length = 934
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/868 (44%), Positives = 553/868 (63%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>sp|P43247|MSH2_MOUSE DNA mismatch repair protein Msh2 OS=Mus musculus GN=Msh2 PE=2 SV=1
Length = 935
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/864 (44%), Positives = 551/864 (63%), Gaps = 33/864 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
GS L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + ++ + + +G+GYVD T+R LGL EF ++ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSVEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G + + E +A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D+ LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A L L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 VMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L +L+
Sbjct: 542 VDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAH 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++++ P PY RP I G IIL+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDF 859
AE ANFP V+ A++KA ELE+F
Sbjct: 831 AELANFPRHVIACAKQKALELEEF 854
>sp|P54275|MSH2_RAT DNA mismatch repair protein Msh2 OS=Rattus norvegicus GN=Msh2 PE=2
SV=1
Length = 933
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/868 (43%), Positives = 546/868 (62%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + V FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEVGFVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L +V +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLQTVVLSKMNFESFVKDLLLVR-HYRVEVYKNKAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + I+ + + + +G+G VD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMATSIGIMGIKLSTVDGQRQVGVGDVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECILPG-GETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GRKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL +N+ C G+RL+ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTTGSQSLAAFLNK-CKTAQGQRLVSQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D+ LR+ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDSELRRALQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVKQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++Y+G+ +L+ ++ PL L D +KF +ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKYQGRHQALLLAVFVTPLTDLRSD--FSKFQEKIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A L L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E +++
Sbjct: 538 NFSTVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTVND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LD ++SFA ++++ P PY RP I G II++ SRH CVE Q V FIPND
Sbjct: 598 VLAHLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIIVKASRHACVEVQHDVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATNIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALA---------SQIPTVNNLHVTAL--TTEETLTMLYQVKTGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPRHVIECAKQKALELEEF 854
>sp|O13396|MSH2_NEUCR DNA mismatch repair protein msh-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=msh-2 PE=3 SV=1
Length = 937
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/887 (43%), Positives = 538/887 (60%), Gaps = 63/887 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ FYK+LP A+R FDR D+YTAHG++ATFIA+T Y TT+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG + L SV+++ +F R+ L + +E++ NW++VK +PGNL
Sbjct: 63 LGRSDHTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWASPSGRMNWKVVKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L + + PVI+A+ + + + T+G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDEL--GGQFEGAPVILAVKISAKASEARTVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPT---EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KEC++ E K E LR + CGV + ER EF T+D+ QDL RL+
Sbjct: 180 LLIQLGVKECIVTQDKGEKEKDPELAKLRQIIDNCGVAIAERSAGEFGTKDIEQDLSRLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ S+ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERAASLLPQTDL----KLAMGSASALIKYLGILHDPSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D KN SL+GL+N C +G RLL WLKQPL++ EI R +V+A
Sbjct: 296 ALKALNLMPGARDGAKNMSLYGLLNH-CKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F +DT LRQ +++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP +
Sbjct: 355 FANDTELRQSMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRLP-------GFI 407
Query: 416 GQFSSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DPL+ + + D L K +VET+VDLD L+N E++I +D
Sbjct: 408 GTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDS 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + L + + + A DL +K + L+ G R+T+ E IR
Sbjct: 468 LRIIRKKLDRLRTDMDNEFAEAAEDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRN-- 525
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
++++ T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A ++ + + L
Sbjct: 526 NSRYLECSTQKNGVYFTTKTLQALRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLERL 585
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
A +L+ LDV++SFA + P Y RP I+P G +L +RHPC+E QD V FI ND
Sbjct: 586 AAVLAHLDVIVSFAHCSVHAPISYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDV 645
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA
Sbjct: 646 TLTREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGAS 705
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 DSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIG 765
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST----------------S 813
LFATHFHELTALA + N V N HV+AHI T
Sbjct: 766 CFALFATHFHELTALADQYPN---------VKNLHVTAHISGTDTDTDVITDEDEKAKKK 816
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 817 REVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 863
>sp|Q553L4|MSH2_DICDI DNA mismatch repair protein Msh2 OS=Dictyostelium discoideum
GN=msh2 PE=3 SV=1
Length = 937
Score = 614 bits (1584), Expect = e-175, Method: Compositional matrix adjust.
Identities = 358/917 (39%), Positives = 541/917 (58%), Gaps = 86/917 (9%)
Query: 2 DDEQNKLPELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTY 58
D+EQ + ++ L K+ + F++F+++L + DT +R FDR+ YY+ HGE+A F+A +
Sbjct: 3 DNEQEESSQVVL--KEDKTFVTFFQSLVSSNEDTDTIRLFDRKGYYSIHGEDAVFVAMMH 60
Query: 59 YHTTTALR-----------QLGTGSDA-----------------LSSVSVSKNM-FETIA 89
+ + +L+ ++ +D L+ +++ + FE I
Sbjct: 61 FKSKKSLKYWSISDPNPKKKIKIDNDGSLTTTASSSQQQQQELGLAVLTIRQGYEFENIV 120
Query: 90 RDLLLERTDHTLELYE---GSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFP 146
++LL E+ +E++ S W L+K G+PGN +EDVL N + V++AL
Sbjct: 121 KELLDEK--KKIEIWSMKPNSKQQWELIKKGSPGNTQMFEDVLLNGN--CEGSVMMALKV 176
Query: 147 NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECK 206
+ G+ + D T + +G+++F+D+ + +N+ S ++ + KECLL + K+ + +
Sbjct: 177 TREKGSIVFGISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQ-KNYDYQ 235
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLS 266
+++ L+ G+ TE K++F +++ QDL RL+ + D+ E A + L+
Sbjct: 236 KVKEKLSDAGIPFTELPKSDFSSKNAEQDLTRLLGSVKNNLPDIEQ--EHAIQSASCLIK 293
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK-----------------TD 309
+ +LLS+ + +G + + KY LD YM+LDS++ + L++++ K +
Sbjct: 294 HLDLLSNPNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDSSVSAAAGGGGAGGASSS 353
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+NK+ SL+ L+N+ C MG RLL W+KQPLL+ EI ARL+ V+AF +D LRQ LR
Sbjct: 354 SNKDQSLYNLLNQ-CNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRS 412
Query: 370 H-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
+ LK+I D++RL L ++A L+ V LY RLP + +L + LIK +++
Sbjct: 413 NDLKKIGDLDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIE 472
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENG-EYMISSSYDTGLSALKNEQESLERQIHSL 487
LES+ D KF A+VE ++DLD + EY+I SS+D L ++ +++ + +I
Sbjct: 473 SLESIISD--FAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERF 530
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
A DL+L K +KL + + RI++K+E IR K ++IV T KDGV+F
Sbjct: 531 RVDIADDLNLDEAK-VKLHYSEKDMFLLRISRKDEVAIRDK--KKYIVHATAKDGVRFAT 587
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
++ L + Y+K EY + Q L R +Q A +F + + L+++++ LDV ++ + ++S
Sbjct: 588 REIDTLNEAYKKWSAEYLDKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTLSHVSS 647
Query: 608 SCPTPYTRPDINP-----PDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
P P+ RP+I P G +I+ G RHPCVE QD VNFI ND L RG+S FQIIT
Sbjct: 648 IAPIPFIRPEIIPLGSDENGAGTVII-GGRHPCVEIQDNVNFIANDIDLTRGQSQFQIIT 706
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVG+ +LMAQ+G FVP +A+I+V DCI +RVGAGD QLRGVSTFM E
Sbjct: 707 GPNMGGKSTFIRQVGLIVLMAQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAE 766
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLET+ ILK AT SLIIIDELGRGTSTYDGFGLAW I E++ +I LFATHFHELT
Sbjct: 767 MLETSYILKVATKNSLIIIDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELT 826
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + V N HVSA + + T+LYKVE G CDQSFGIHVA ANFP
Sbjct: 827 IL---------SDLLPMVKNLHVSASTQNNT--FTLLYKVEQGPCDQSFGIHVAILANFP 875
Query: 843 ESVVTLAREKAAELEDF 859
V+ A++KA ELE F
Sbjct: 876 SQVIENAKQKAKELESF 892
>sp|P25847|MSH2_YEAST DNA mismatch repair protein MSH2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSH2 PE=1 SV=2
Length = 964
Score = 595 bits (1535), Expect = e-169, Method: Compositional matrix adjust.
Identities = 353/906 (38%), Positives = 522/906 (57%), Gaps = 84/906 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 QLGTGSDALSSVSVSKNMFE-----TIARDLLLERTD-------HTLELYEGSGSNWRLV 114
L V+ +KN E T++ +L + +E+Y+ W+L+
Sbjct: 66 NC-----QLDPVT-AKNFHEPTKYVTVSLQVLATLLKLCLLDLGYKVEIYD---KGWKLI 116
Query: 115 KSGTPGNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAE 171
KS +PGN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ +
Sbjct: 117 KSASPGNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLD 173
Query: 172 FLDDSHFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFK 228
+D+ ++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF
Sbjct: 174 IVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFS 233
Query: 229 TRDLVQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSL 287
+D+ DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L
Sbjct: 234 EKDVELDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKL 291
Query: 288 DSYMRLDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMG 329
+M+LD++A++ALN+ S ++ K SLF L+N C G
Sbjct: 292 KEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAG 350
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRR 388
RLL+ WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR
Sbjct: 351 VRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR- 409
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKF 442
L+ ++K+YQ S R+P I + + L++ +L PL + L+KF
Sbjct: 410 GNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVNELVRSVWLAPLSHHVEP--LSKF 467
Query: 443 IALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
+VET+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK
Sbjct: 468 EEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDTLRDEIHSIHLDSAEDLGFDPDK 527
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LKL+ G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ +
Sbjct: 528 KLKLENHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQ 585
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
+EY Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P
Sbjct: 586 KEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPM 645
Query: 622 DVGD-IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
D L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV
Sbjct: 646 DSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVIS 705
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ+G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII
Sbjct: 706 LMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLII 765
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
+DELGRGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V
Sbjct: 766 VDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNV 816
Query: 801 ANYHVSAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
N HV AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA
Sbjct: 817 KNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKA 876
Query: 854 AELEDF 859
EL+D
Sbjct: 877 NELDDL 882
>sp|O74773|MSH2_SCHPO DNA mismatch repair protein msh2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=msh2 PE=3 SV=2
Length = 982
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 335/910 (36%), Positives = 509/910 (55%), Gaps = 86/910 (9%)
Query: 17 QARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALS 76
+AR F +FY+ +P DT VR FDR ++Y A GE+A+F+A+ YHTT+ L+ + S
Sbjct: 15 EARMF-NFYEKMPKDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKHHNVSNT--S 71
Query: 77 SVSVSKNMFETIARDLLLERTDHTLELY--EGSGSNWRLVKSGTPGNLGSYEDVLFANNE 134
++S ++F A D+L +E++ + + + L+K +PGN+ ED+L + N
Sbjct: 72 YCNLSPSLFIKFAEDVL-SNLAKRVEIWGANSAKTGFELLKQASPGNMQMLEDLLVSENY 130
Query: 135 MQDTPVIV--------ALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALV 186
+ T + A+ +++ IG+ ++D + LG++EF+D +TN E+ +V
Sbjct: 131 QESTAISDSSVSSVLLAVTTRVKQDQRIIGVAFIDPILKKLGVSEFVDSDAYTNFEALIV 190
Query: 187 ALGCKECLLPTE-----------AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
+G KEC++ ++ ++E LR+ + CG ++T + +EF RD+ +
Sbjct: 191 QVGAKECIISQSGHESTNGNSAVSINTAEINRLRNIIEGCGALVTTIRSSEFSARDVELE 250
Query: 236 LDRLVRGSVEPVRDLVSGFEIAPGALGALLSY-------AELLSDESNYG-NYYIRKYSL 287
L +++ V G ++A + ALL Y ++ D N ++ ++L
Sbjct: 251 LSKVLDSPVTHALVPELGLQLAMASCNALLRYLGPALLNPDMEDDRENTSRKLHLYHHNL 310
Query: 288 DSYMRLDSAAMRALNVLESKT-DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
+ YMRLD AA+R+LN+L +A+K SL+GL+N C MG R L W+ QPLLD
Sbjct: 311 EQYMRLDIAAVRSLNLLPPPNGNAHKTMSLYGLLNH-CRTAMGARNLRRWIVQPLLDAKS 369
Query: 347 INARLDIVQAFVDDTALRQDLRQHL---KRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
I R D+V A V+D RQ L + I DI +L L + A L+ +V++YQ +
Sbjct: 370 IERRHDLVSALVEDAEARQLLLDDDHLLRSIPDIPKLCRRLTRGSASLEDVVRIYQMAKA 429
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
LP I + L + L+ + Y + L + + L K I LVET++DL+ L++ +Y+I
Sbjct: 430 LPKIVTVLDSLTSEHKDLVDKVYTNVLNNHCKN--LEKLIELVETTIDLEALDSHQYIIR 487
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+ +D L L+ + L+ I HK+ SDL +K L L++ +G R+T+ E
Sbjct: 488 AEFDEELLDLRQRLDELQHSIFEEHKRVGSDLHQDTEKKLHLEQHHLYGWCLRLTRTEAG 547
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
+R + ++ + L T+K+GV FT +L L + Y + Y+ Q L VI+ A T+
Sbjct: 548 CLRGR-SSHYTELSTQKNGVYFTTKRLHSLNNSYMDHQKSYRYHQNGLAREVIKIAATYG 606
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-----------NPPDVGDII----- 627
+++ +++ LDV+LSFA ++ PY RP+I ++ DI+
Sbjct: 607 PPLEAIGQVIAHLDVILSFAHASTVAVIPYVRPNIVDSSIAQEKHGQSSNILDIVSLEDT 666
Query: 628 -------------------LEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
L+ +RHPC+EAQD V FIPND L G S IITGPNMGG
Sbjct: 667 PNFEEIRRTLENNHCARLYLKQARHPCLEAQDDVKFIPNDVNLEHGSSELLIITGPNMGG 726
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST+IRQVGV +MAQ+G VPC+ A + + D I ARVGA D QL+G+STFM EMLETA+
Sbjct: 727 KSTYIRQVGVITVMAQIGCPVPCEVADLDIIDAILARVGASDSQLKGISTFMAEMLETAT 786
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL+ AT RSLIIIDELGRGTST DGFGLAWAI EH+V +I LFATH+HE+T L+ E
Sbjct: 787 ILRAATPRSLIIIDELGRGTSTTDGFGLAWAITEHIVTQIGCFCLFATHYHEMTKLSEE- 845
Query: 789 ANEFNTKQMVGVANYHVSAHI-DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+ V N HV+A++ DS S+ + +LY V GA D+SFGIHVA+ A+FP ++
Sbjct: 846 --------ITTVKNLHVTAYVGDSESKDVALLYNVCEGASDRSFGIHVAKLAHFPPKIIE 897
Query: 848 LAREKAAELE 857
+A KAAELE
Sbjct: 898 MASNKAAELE 907
>sp|P43248|MSH2_DROME DNA mismatch repair protein spellchecker 1 OS=Drosophila
melanogaster GN=spel1 PE=3 SV=4
Length = 917
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 336/865 (38%), Positives = 491/865 (56%), Gaps = 40/865 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTALR 66
P L +D R F+ F+ L VRFFD D YT HG ++ +AK Y +T +
Sbjct: 12 PTLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIG 71
Query: 67 QL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
L + L VS+SK FE R+LLL R ++ +E+Y + S+W + G+PGNL
Sbjct: 72 ALLPDDKKETLQFVSMSKGNFELAVRELLLVR-NYRVEVYVKNSSDWEIEYRGSPGNLLQ 130
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+ED+LF+N E+ I++L G +G+ V+ L EFLDD FT +E+
Sbjct: 131 FEDILFSNKEVLVGNSIISLLVKLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEA 190
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
+V LG KECLLP+ + S KTL D R GVM+T KK+ DL+QDL+RL+R
Sbjct: 191 TVVLLGPKECLLPSIEGEYSAVKTLLD---RNGVMITMPKKS--GDNDLLQDLNRLLRFA 245
Query: 242 -GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
G E L ++A AL + Y +L++D N G+Y I++ L+ ++ LDSAA+
Sbjct: 246 KGQQEDATGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVA 305
Query: 300 ALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
ALN++ + + S+ G+++ C G RL+ W+KQPL N +N R +IV
Sbjct: 306 ALNIMPKPGTHPSMPSYRWQSVLGVLDH-CRTPQGHRLMGQWVKQPLRSRNILNDRHNIV 364
Query: 355 QAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
Q ++ + L +LKRI DI L L +R+A LQ + ++YQ +R P I L +
Sbjct: 365 QCLLESPDTMETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLHE 424
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ +S I+ P +S D L +VE VD + +E GEY++ +S+D+ L L
Sbjct: 425 LD---NSTIESVICAPFKSFLKD--LTGLKQMVEQVVDFEAIERGEYLVKASFDSRLMEL 479
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ L ++ L + + +L+L +KL+ + GH FRIT K++ +RK +
Sbjct: 480 QQMMTELYSKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRK--NKNY 537
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
+++ K GV+FT+ KL+ D++ Y+ Q +V +I AV ++ L L
Sbjct: 538 RIVDVIKGGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNEL 597
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD L+SFA A S PTPY RP + +++LE RHPC+E Q+ VNFI N +
Sbjct: 598 AQLDCLVSFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKK 657
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+ IITGPNMGGKST+IR VG +LMA +G+FVPC A+IS+ D I RVGA D +
Sbjct: 658 EECNMFIITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNII 717
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E + TL
Sbjct: 718 KGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTL 777
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T LA + + V N H++A D+ T+LY+V G ++SFGI
Sbjct: 778 FATHFHEITKLA---------ETLSTVKNCHMAAVADADD--FTLLYQVRSGVMEKSFGI 826
Query: 834 HVAEFANFPESVVTLAREKAAELED 858
VA ANFPE VV A+E E ED
Sbjct: 827 QVARLANFPEHVVQNAQEVYNEFED 851
>sp|Q8RA71|MUTS_THETN DNA mismatch repair protein MutS OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=mutS PE=3 SV=1
Length = 869
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 221/629 (35%), Positives = 340/629 (54%), Gaps = 47/629 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
+LGALLSY + L S + Y +SYM LDS A+R L +LES + +K SL G+
Sbjct: 237 SLGALLSYLKELQKTSLKHINKLTLYQDNSYMGLDSNAIRNLEILESNRNKSKKGSLLGV 296
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT T MG RLL WL++PL+D +EI RLD V+ ++ R +L++ L ++ D+ER
Sbjct: 297 LDRTVTP-MGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKELLNKVYDLER 355
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + + + + + S LP I++ L ++ S L+KE Y E L D L
Sbjct: 356 LASKIVYQSVTPKDFISIKLSLQNLPKIKNILSKFS---SRLLKEIY----EKL---DVL 405
Query: 440 NKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L++ S+ D QL+ G +I Y+ + L+ + I +L A + +
Sbjct: 406 QDVYELIDKSIKDDPSNQLKEGN-IIKDGYNEMVDKLRKASTEGKNWIANLE---ADERE 461
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
K L++ FG+ +TK P++ ++I +T + ++ +LK++ +
Sbjct: 462 KTGIKNLRIGYNKVFGYYIEVTKSNIPQV----PDRYIRKQTLANAERYVTPELKEIEET 517
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E+ + EL N + + ++ A ++ +DVL+SFA++A + Y +P
Sbjct: 518 ILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAET--NKYVKP 575
Query: 617 DINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
++ D I+++ RHP VE F+ ND I ++ IITGPNM GKST++RQV
Sbjct: 576 IVDYED--RIVIKEGRHPVVETISDEGFVANDID-IGPENPIMIITGPNMAGKSTYMRQV 632
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ +LMAQVG FVP A I + D IF RVGA D G STFM EM E A+IL AT +
Sbjct: 633 ALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSK 692
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L +
Sbjct: 693 SLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEG---------K 743
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ GV N++VS ++ + L+K+ PG D+S+GI V++ A P S++ A+E L
Sbjct: 744 LRGVRNFNVS--VEEREDDIIFLHKIVPGGSDRSYGIQVSKLAGLPYSIIERAKEILEAL 801
Query: 857 EDFTPSAVISDDA-KIEVCAFISQFLMTK 884
E D A K E+ +SQF T+
Sbjct: 802 E--------RDKAVKNELEEAVSQFAFTQ 822
>sp|B9MJU0|MUTS_CALBD DNA mismatch repair protein MutS OS=Caldicellulosiruptor bescii
(strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=mutS PE=3
SV=1
Length = 863
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 335/616 (54%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L++ YIR+ Y + +Y+++D R L + ES ++ SL
Sbjct: 223 SVGNLLKY---LTETQKISFDYIRRFEFYRVQNYLQIDINTKRNLELTESIIQRSRKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+D+ EIN RLD V+ + + + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDIIEINKRLDSVEELKSNYSTLVQVEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L ++ S L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKKSIEVLPTLKQFLSSFD---SELLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQ 490
AL+++S++ D L+ G +I ++ + L+N + S E + K+
Sbjct: 396 ---------ALIDSSINEDAPVSLKEGG-IIKEGFNEEVDRLRNISKNSKELLVEYEEKE 445
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+L K L++ FG+ +TK + ++I +T + ++ +L
Sbjct: 446 R----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYITEEL 497
Query: 551 KKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
KKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 498 KKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASNIANLDVLCSFARIA 553
Query: 607 SSCPTPYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
Y RP++ +GD I ++ RHP VE NFIPND +L + ++ IITGP
Sbjct: 554 --IDNEYVRPNVY---LGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I V D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGVVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELEE---------RIPGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EEVLKRAEEILKQLEE 793
>sp|A4XL47|MUTS_CALS8 DNA mismatch repair protein MutS OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=mutS
PE=3 SV=1
Length = 863
Score = 306 bits (785), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 215/611 (35%), Positives = 334/611 (54%), Gaps = 52/611 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL+Y L D YI+K Y + +Y+++D + R L + ES +K SL
Sbjct: 223 SVGNLLNY---LVDTQKISFNYIKKFEFYRVQNYLQIDLSTKRNLELTESIIARSKKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
FG++++ T+ MG RL+ WL++PL+DV EIN RLD V+ ++ L + L+ I D
Sbjct: 280 FGILDQAKTS-MGSRLIKKWLERPLIDVVEINRRLDAVEELYNNFPLLMQIEGLLEGIYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS-LIKERYLDPLESLTD 435
IERL + + ++ L +S LP ++ L G+F S L+KE Y + L++L D
Sbjct: 339 IERLSSKFAYKSINAKDLLSLKKSIEVLPRLKELL----GEFKSPLLKELY-NELDTLED 393
Query: 436 DDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQT 491
+L+++S++ D L+ G +I ++ + L+N + S E I K+
Sbjct: 394 ------VYSLIDSSINEDAPVGLKEGG-IIKDGFNDHVDRLRNISKNSKELLIQYEEKER 446
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+L K LK+ FG+ +TK + ++ +I +T + ++ +LK
Sbjct: 447 ----NLTGIKNLKIGYNKVFGYYIEVTKSNYSLVPER----YIRKQTLANAERYVTEELK 498
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
KL D+ ++ + EL ++ + E + A+ ++ +D L SFA +A
Sbjct: 499 KLEDEIINAEQKLVELEYELFCQIRDKIESQIERIQKTASCIAIIDALCSFAHIA--IDN 556
Query: 612 PYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
YT+P + +GD I ++ RHP VE + NF+PND +L ++ IITGPNM GK
Sbjct: 557 RYTKPIVY---LGDRIYIKNGRHPVVEKMIGYSNFVPNDTELDNDQNRVLIITGPNMAGK 613
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQV + ++MAQ+G FVP + A I + D IF+R+GA D G STFM EM E A+I
Sbjct: 614 STYMRQVALIVIMAQMGCFVPAEEAQIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANI 673
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHE 787
LK AT +SLII DE+GRGTSTYDG +AWA+ E + + +I A TLFATH+HELT L
Sbjct: 674 LKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEFVADKSKIGAKTLFATHYHELTELE-- 731
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+++ GV NY V + + + L K+ G CD S+GIHVA A PE V+
Sbjct: 732 -------EKISGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLQ 782
Query: 848 LAREKAAELED 858
A + +LE+
Sbjct: 783 RAEQILKKLEE 793
>sp|B8CX98|MUTS_HALOH DNA mismatch repair protein MutS OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=mutS PE=3 SV=1
Length = 896
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 321/629 (51%), Gaps = 69/629 (10%)
Query: 251 VSGF--EIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLE 305
+SGF E P A+ A L D +I + Y+L YM LDSA L +
Sbjct: 221 LSGFGCEDKPAAILAAGEIINFLKDTQKRTLEHINRITTYNLTDYMVLDSATRYNLELTS 280
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ SL ++++T T+ MG RL+ W+ QPL+D N+I RLD V+ V++ L Q
Sbjct: 281 TIRGNKHKGSLLNVLDQTITS-MGGRLIKKWINQPLIDRNKIETRLDAVEELVNNYLLLQ 339
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
++R+HLK I D+ER++ + A + + L S ++LP I+ L+Q + + E
Sbjct: 340 EIREHLKGIYDLERILGKVSYGSANARDLAALKYSILKLPQIKKDLEQLNTKLFKNMHET 399
Query: 426 YLDPLESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLE 481
+ DPL L L++ S+ + E G +I Y + L L+ + +
Sbjct: 400 F-DPLIDLA---------GLLDRSIVDEPPVSVREGG--LIKDGYSSELDELRKARTEGK 447
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
I +L K + +LK+ FG+ ITK ++ T + +T +
Sbjct: 448 DWIANLQKTERERTGIS---SLKVGFNKVFGYYIEITKANLDRVPDNYTRK----QTLSN 500
Query: 542 GVKFTNTKLK-----------KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+F +LK K+ D K+ + ++ ++ + R+ +TA
Sbjct: 501 SERFITPELKEKEALVLGAEEKINDLEYKLFVKIRDIVRDNIKRIKKTA----------- 549
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
++S+LDVL S A ++ Y RP IN V +II RHP VE F+PND
Sbjct: 550 AIISKLDVLTSLAQ--NALERDYNRPRINNDGVIEII--KGRHPVVEDMGKGAFVPNDTY 605
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L + F IITGPNM GKST++RQV + +LMAQ+GSFVP D+A+I + D IF RVGA D
Sbjct: 606 LDLEEERFIIITGPNMSGKSTYMRQVALIVLMAQMGSFVPADKATIGIVDRIFTRVGASD 665
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEI 768
G STFM EM E A+I+ AT SLII+DE+GRGTSTYDG +AWA+ E++ + I
Sbjct: 666 DLTTGQSTFMVEMNEVANIVNNATRNSLIILDEVGRGTSTYDGLSIAWAVSEYINNPDRI 725
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
A TLFATH+HELT L + G+ NY+V D + L+K+ PG
Sbjct: 726 GARTLFATHYHELTQLENR----------PGIKNYNVLVEEDEDG--VHFLHKIIPGKAS 773
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELE 857
+S+GI VA+ A P ++ A+E AELE
Sbjct: 774 ESYGIEVAQLAGLPMEIIIRAQEILAELE 802
>sp|A5N8I5|MUTS_CLOK5 DNA mismatch repair protein MutS OS=Clostridium kluyveri (strain
ATCC 8527 / DSM 555 / NCIMB 10680) GN=mutS PE=3 SV=1
Length = 871
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 316/585 (54%), Gaps = 51/585 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y++ Y+ +D + R L ++ES ++ K SL G++++T T+ MG R L W++QPL+D
Sbjct: 256 YNIVDYLTIDINSKRNLEIVESLRESKKKGSLLGVIDKTNTS-MGGRQLRKWIEQPLIDR 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N+I RLD V+ +++ +DL++ LK I DIERL + + +++ L S ++
Sbjct: 315 NKIMERLDSVEEILNNICYHEDLKEALKNIYDIERLAGKISSKSVNAKELNSLKSSIEKI 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P I+ L +E +SL+K Y + L+ L D L L SV L + +I
Sbjct: 375 PDIKVILSNFE---TSLLKNMYKN-LDELKDIYMLLDKAILDNPSVSLKEGN----LIKE 426
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK---- 520
YD+ + LK + + I SL +S+ +L K+LK+ FG+ +TK
Sbjct: 427 GYDSEIDRLKEAKVKGKDWIASLE---SSERELTKIKSLKIGYNKVFGYYIEVTKSNLNL 483
Query: 521 --EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
E IRK+ + ++I E ++ K + K + +Y +E +KE V R+
Sbjct: 484 VPEHRYIRKQTLSNAERYITPELKEMEDKILGAEEKLIYLEYNAFVEVRDKVEKE-VTRI 542
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
++ A ++SE+D L S A ++ Y +P+I D + +E RHP
Sbjct: 543 -----------QNSARIISEVDCLTSLA--RAALENNYCKPEITLSD--RVYIEEGRHPV 587
Query: 636 VEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE F+ ND + G++ +ITGPNM GKST++RQV + +MAQ+GSFVP A
Sbjct: 588 VENMLSTGEFVSNDTDIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGSFVPAKSA 647
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
SIS+ D IF R+GA D G STFM EM E ++ILK AT++SLI++DE+GRGTSTYDG
Sbjct: 648 SISICDKIFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGL 707
Query: 755 GLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
+AW++ E++ E +R TLFATH+HELT L ++ GV NY VS +
Sbjct: 708 SIAWSVIEYICRESKLRCKTLFATHYHELTKLEG---------KIKGVKNYCVS--VKEV 756
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A PE V+ ARE LE
Sbjct: 757 ENNIVFLRKIIRGGADQSYGIEVAKLAGLPEEVLKRAREILNSLE 801
>sp|B9E1Z0|MUTS_CLOK1 DNA mismatch repair protein MutS OS=Clostridium kluyveri (strain
NBRC 12016) GN=mutS PE=3 SV=1
Length = 871
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 316/585 (54%), Gaps = 51/585 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y++ Y+ +D + R L ++ES ++ K SL G++++T T+ MG R L W++QPL+D
Sbjct: 256 YNIVDYLTIDINSKRNLEIVESLRESKKKGSLLGVIDKTNTS-MGGRQLRKWIEQPLIDR 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N+I RLD V+ +++ +DL++ LK I DIERL + + +++ L S ++
Sbjct: 315 NKIMERLDSVEEILNNICYHEDLKEALKNIYDIERLAGKISSKSVNAKELNSLKSSIEKI 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P I+ L +E +SL+K Y + L+ L D L L SV L + +I
Sbjct: 375 PDIKVILSNFE---TSLLKNMYKN-LDELKDIYMLLDKAILDNPSVSLKEGN----LIKE 426
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK---- 520
YD+ + LK + + I SL +S+ +L K+LK+ FG+ +TK
Sbjct: 427 GYDSEIDRLKEAKVKGKDWIASLE---SSERELTKIKSLKIGYNKVFGYYIEVTKSNLNL 483
Query: 521 --EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
E IRK+ + ++I E ++ K + K + +Y +E +KE V R+
Sbjct: 484 VPEHRYIRKQTLSNAERYITPELKEMEDKILGAEEKLIYLEYNAFVEVRDKVEKE-VTRI 542
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
++ A ++SE+D L S A ++ Y +P+I D + +E RHP
Sbjct: 543 -----------QNSARIISEVDCLTSLA--RAALENNYCKPEITLSD--RVYIEEGRHPV 587
Query: 636 VEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE F+ ND + G++ +ITGPNM GKST++RQV + +MAQ+GSFVP A
Sbjct: 588 VENMLSTGEFVSNDTDIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGSFVPAKSA 647
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
SIS+ D IF R+GA D G STFM EM E ++ILK AT++SLI++DE+GRGTSTYDG
Sbjct: 648 SISICDKIFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGL 707
Query: 755 GLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
+AW++ E++ E +R TLFATH+HELT L ++ GV NY VS +
Sbjct: 708 SIAWSVIEYICRESKLRCKTLFATHYHELTKLEG---------KIKGVKNYCVS--VKEV 756
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A PE V+ ARE LE
Sbjct: 757 ENNIVFLRKIIRGGADQSYGIEVAKLAGLPEEVLKRAREILNSLE 801
>sp|B8I2Q5|MUTS_CLOCE DNA mismatch repair protein MutS OS=Clostridium cellulolyticum
(strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=mutS
PE=3 SV=1
Length = 873
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 212/616 (34%), Positives = 329/616 (53%), Gaps = 44/616 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+ ++IA A GALL Y E + Y+L+ YM LD+++ R L + E+ +
Sbjct: 227 IQEYDIAVNASGALLKYLESTQKVNLSHIQKFNSYALEEYMILDASSRRNLELTETMREK 286
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+K SL ++++T T+ MG RLL W++QPL++ +I+ RLD V+ + +R + R+
Sbjct: 287 SKKGSLLWVLDKTMTS-MGGRLLRKWIEQPLINHGDISLRLDAVEELKNKFMVRVEAREL 345
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
LKR+ DIERLM + + ++ L S ++PYI+S L +E ++ E+ LD L
Sbjct: 346 LKRVYDIERLMGKVVLGSVNCRDLIALKNSMCQIPYIKSLLNGFEAEYIKNCGEQ-LDCL 404
Query: 431 ESLTDDDHLNKFIALVETSVDLDQ-----LENGEYMISSSYDTGLSALKNEQESLERQIH 485
E + + L+E S+ +D+ E G +I Y+ + L+ + I
Sbjct: 405 EDVCN---------LIEVSI-IDEPPVTIKEGG--IIKDGYNPEVDKLRMASIQGKDWIA 452
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+L AS + K LK+ FG+ +TK + + ++I +T + ++
Sbjct: 453 ALE---ASQREKTGIKNLKVGFNRVFGYYIEVTKSYFSLVPE----EYIRKQTLSNCERY 505
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+LK++ D E+ + L + + KS A L+E+DVL S A++
Sbjct: 506 ITPELKEIEDTILGAEEKIIQLEYSLFVEIKEKIAEQLSRIKSTARALAEIDVLASLAEV 565
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
A Y +P+++ D +II EG RHP VE D F+PND L + IITGP
Sbjct: 566 ADR--EGYCKPEVSLSDKIEII-EG-RHPVVEKMTDKSGFVPNDTVLDMEEDRLAIITGP 621
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM
Sbjct: 622 NMAGKSTYMRQTALIVLMAQIGSFVPAATAKIGLVDRIFTRVGASDDLASGQSTFMVEMS 681
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELT 782
E A+IL AT RSL+++DE+GRGTST+DG +AWA+ E++V E++ TLFATH+HELT
Sbjct: 682 EVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVNKEQLGCRTLFATHYHELT 741
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ G+ NY ++ + + L K+ G D S+GI VA+ A P
Sbjct: 742 ELEG---------KLPGIKNYCIT--VKEKGEDVIFLRKIIRGGADGSYGIQVAKLAGVP 790
Query: 843 ESVVTLAREKAAELED 858
+SV+ A+E + L+D
Sbjct: 791 QSVIDRAKEILSNLDD 806
>sp|P61667|MUTS_GEOSL DNA mismatch repair protein MutS OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=mutS PE=3 SV=1
Length = 871
Score = 302 bits (774), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 304/601 (50%), Gaps = 34/601 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+ A+L Y + Y++ Y ++ LD ++ R L + + D + SL GL
Sbjct: 237 AVAAVLHYLQQTQKGDVRHISYLQAYRTQEFLVLDESSRRNLELNATIGDGKRRGSLLGL 296
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R L W+ PL+ + +IN RLD V+ V D RQ +R L + D+ER
Sbjct: 297 LDRTVTA-MGGRKLKQWINYPLVSIEKINERLDAVEELVADAEFRQGVRAALDGVYDLER 355
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + +V L S +RLP + + L +S + R D ++ L D + L
Sbjct: 356 LNGRISLASASAKDLVALRASLVRLPSLIALLTPA----ASTLLARLRDGIDLLADVEEL 411
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
+ + L E G +I+ Y + L L++ + I L Q + +
Sbjct: 412 IGRGIVPDPPFVLR--EGG--IIAQGYHSELDELRSISREGKGFIARLEAQEKARTGI-- 465
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ +TK I +I +T + +F +LK+ ++
Sbjct: 466 -SSLKVRYNKVFGYYIEVTKSNLSAI----PDDYIRRQTLANAERFITPELKEYEEKVLG 520
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ + L + Q E A L+ LDVL + AD+A Y RP ++
Sbjct: 521 AEDRIVELEYALFQDIRQRVAAQGERIARTADRLATLDVLAALADVAHD--HRYVRPTVD 578
Query: 620 PPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
D I++ G RHP VEA + F+ ND +L G++ IITGPNM GKSTF+RQV +
Sbjct: 579 EGDA--IVVTGGRHPVVEALNRSERFVANDVQLDNGENQLVIITGPNMAGKSTFMRQVAL 636
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
+LMAQ GSFVP D ASI V D IF RVGA D RG STFM EM+ETA+IL+ AT RSL
Sbjct: 637 IVLMAQTGSFVPADEASIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPRSL 696
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
+++DE+GRGTST+DG +AWA+ E+L E A TLFATH+HELT LA T+
Sbjct: 697 VVLDEIGRGTSTFDGVSIAWAVAEYLHDTERCAAKTLFATHYHELTELA-------VTRN 749
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
V N V D ++ L K+ G S+GI VA A P+ V+ A+E L
Sbjct: 750 RVKNCNVAVKEWND----QVIFLRKIVEGGASHSYGIQVARLAGLPQEVIERAKEILHNL 805
Query: 857 E 857
E
Sbjct: 806 E 806
>sp|Q67NK1|MUTS_SYMTH DNA mismatch repair protein MutS OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=mutS PE=3 SV=1
Length = 875
Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 303/578 (52%), Gaps = 38/578 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y YM LD A R L + S D + +L +M+RT TA MG RLL WL++PLLD+
Sbjct: 266 YYPGDYMVLDPATRRNLELTRSLRDGGRRGTLLWVMDRTVTA-MGARLLKSWLERPLLDL 324
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I+AR + V V LR DLR L+ + D+ERL + A + +V L QS + L
Sbjct: 325 RQIHARHEAVGELVHRPVLRADLRALLQEVHDLERLAGRVAVGSANARDLVALKQSLVAL 384
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P IR AL+ + L++ R D L+ L D L + E V L E G ++
Sbjct: 385 PSIRVALEDVRAE--RLVELR--DQLDMLDDVRDLIEHAIADEPPVALT--EGG--ILKD 436
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
+ + L+ + I + + + K+LK+ FG+ +TK P
Sbjct: 437 GFHPEVDELRRIARDGKAWIAQVEARERERTGI---KSLKIGYNKVFGYYLAVTKPNLPL 493
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ-TAVTFS 583
+ +I +T + +F +LK+L ++ E + + EL + Q A +
Sbjct: 494 V----PPDYIRKQTLANEERFITPELKELEEKVLHAAERVMDLEYELFVEIRQRVAAEVT 549
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE--GSRHPCVE-AQD 640
I +S A ++ELD L SFA++AS Y RP ++ G +LE GSRHP +E +
Sbjct: 550 RIQRS-ARAVAELDALASFAEVASLYG--YCRPLVD----GSTVLELKGSRHPVLERVME 602
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
F+PND + G++ +ITGPNMGGKST +RQ + +++AQ GSFVP + A I + D
Sbjct: 603 EGAFVPNDLLVDTGENRVLLITGPNMGGKSTVMRQAALAVILAQAGSFVPAESAHIGLVD 662
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F RVGA D G STFM EM E A+IL AT+RSL+++DE+GRGT+T+DG +AWAI
Sbjct: 663 RVFTRVGASDDLATGRSTFMVEMTEVANILHSATERSLVVLDEVGRGTATFDGLSIAWAI 722
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
EH+ + I TLFATH+HEL L + GV NY V+ + + L
Sbjct: 723 TEHIHQAIGCRTLFATHYHELCEL---------EGILPGVKNYSVA--VMEKGEDIIFLR 771
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
K+ G D+S+GI V A P SVV ARE A LE+
Sbjct: 772 KLVRGGADRSYGIQVGRLAGLPASVVERAREILATLEE 809
>sp|Q2S254|MUTS_SALRD DNA mismatch repair protein MutS OS=Salinibacter ruber (strain DSM
13855 / M31) GN=mutS PE=3 SV=1
Length = 908
Score = 300 bits (767), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 298/586 (50%), Gaps = 47/586 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I++YS D ++ LD R L +++S D +L +++ T T MG R L WL +PL
Sbjct: 266 IKRYSKDEHIALDPETKRNLELVQSIQDDGHEGTLVSILDETETP-MGGRRLRAWLVRPL 324
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
DV I RLD V+A VDD LR DLR+ L ++ D+ERL + RA ++ + +
Sbjct: 325 RDVGRIRHRLDAVEACVDDRTLRDDLREELNQMGDLERLAGKVATGRAAPGDLIAIKHTL 384
Query: 402 IRLPYIRSALQQYEGQFSSLIKE------RYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
RLP + L + I++ +D ++S DD K
Sbjct: 385 RRLPNVLGLLTDADSDALGAIEDDLRSCPEMVDRIQSALVDDPPAKIS------------ 432
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
E G +I Y L L+ + + + +L + + D+P +LK+ FG+
Sbjct: 433 EGG--LIRDGYSEELDELRTIAQEGKDWVANLETEESERTDIP---SLKVGFNKVFGYYI 487
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
+T K+ + +I +T D ++ +LK++ ++ E+ + ++EL N +
Sbjct: 488 EVTNTHADKVPE----DYIRKQTLVDSERYVTPELKEMEEKILTAEEKIETLEQELFNEL 543
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ I + A +L+ LD A++A YTRP ++ D I +E RHP
Sbjct: 544 RSQIAQQTGILQENAELLAHLDCFAGLAEVAEQHD--YTRPSVD--DGLTIDIEEGRHPV 599
Query: 636 VEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE FIPND L IITGPNM GKS +RQVG+ +L+AQVGSFVP +
Sbjct: 600 VEQTLPPGDPFIPNDMALDPDDEQVLIITGPNMAGKSVALRQVGLIVLLAQVGSFVPAEA 659
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I V D IF RVGA D G STF+ EM E A+IL AT RSLI+ DE+GRGTST+DG
Sbjct: 660 AQIGVVDRIFTRVGASDNLAAGESTFLVEMNEAANILNNATARSLILFDEVGRGTSTFDG 719
Query: 754 FGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
+AWAI E+L E E+ A TLFATH+HEL A+A ++ V NY + +
Sbjct: 720 LSIAWAIVEYLHERPEVAARTLFATHYHELNAMA---------DRLERVHNYRI--QVSE 768
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ L K+ PG D S+GI VA+ A P++V+ ARE LE
Sbjct: 769 HEGEIVFLRKLIPGGADHSYGIEVAKMAGLPDAVIARAREVLQNLE 814
>sp|Q12VC9|MUTS_METBU DNA mismatch repair protein MutS OS=Methanococcoides burtonii
(strain DSM 6242) GN=mutS PE=3 SV=1
Length = 887
Score = 299 bits (766), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 224/722 (31%), Positives = 364/722 (50%), Gaps = 48/722 (6%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
G+ ++D++ +F D S + + S + EC++ + + S E L + L
Sbjct: 139 GVSFLDVSTGEFLTTQFADKSPYDRIASEAARMRPSECII-SRTMFSDE--RLVERLKEL 195
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL-VSGFEIAPGALGALLSYAELLSDE 274
V++ K F + L+R +V + + +G A + GA L YA L +
Sbjct: 196 NVLVQGFKDEAFDVDSSRKLLERHF--NVSTLEGMGCAGLPYATSSAGAALDYA-LTTQM 252
Query: 275 SNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
G+ + YS +M LDS +R L ++++ + S+ +++ T T MG RLL
Sbjct: 253 RELGHVSELSTYSDSEFMMLDSITLRNLEIVKNVRGEGNDTSILKVLDDTNTP-MGGRLL 311
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
WL +PL++V+ I+ RLD ++ +DT LR D+R HL + DIERL+ + + +
Sbjct: 312 QKWLLKPLINVDSIDHRLDALECLANDTMLRFDVRSHLSFVKDIERLIGRVVYGNSNARD 371
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV--- 450
++ L +S +P I ++ G E ++ + L + L + L++ ++
Sbjct: 372 LIALKRSLGSVPQIVESMGDDPGC------EMLINIRDGLLGFEQLENIVKLIDDAIVDE 425
Query: 451 -DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+ E G MI S Y+ L LK + I S ++ + D K+LK+
Sbjct: 426 PPVSVREGG--MIRSGYNEKLDELKGMSTGGKTWIASFQQK---ERDRTGIKSLKVGYNR 480
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ ITK +I +I +T ++ +F +LK+ D E+ +
Sbjct: 481 VFGYYIEITKSNIAQI----PDDYIRKQTMRNAERFYTPELKEWEDVILSADEKITALEN 536
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL + + + + +A ++ +LD S A++A + + RP+I D +I E
Sbjct: 537 ELFTEITSRIASHASDLQRIAVLIGQLDCTASLAEVAVN--NNFVRPNITS-DCKILIRE 593
Query: 630 GSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
G RHP VE F+PND ++ F +ITGPNM GKST++RQV + ++MAQ GSFV
Sbjct: 594 G-RHPVVEKTVRGGFVPNDTEMDCVDEQFLLITGPNMAGKSTYMRQVSLIVIMAQAGSFV 652
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P ASI + D +F RVGA D G STFM EM+E A+IL AT +SL+++DE+GRGTS
Sbjct: 653 PASHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLVLLDEIGRGTS 712
Query: 750 TYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEFNTKQMVGVANYHVSA 807
TYDG+ +A A+ E++ + R +LFATH+H+LT + + + V NYH++
Sbjct: 713 TYDGYSIAKAVVEYIHNKGRVGVRSLFATHYHQLTNI---------SSSLKRVKNYHIAV 763
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
D L L K+ PGA D+S+GIHVA A P V A+E ++ED +VIS
Sbjct: 764 KEDGDD--LVFLRKIVPGATDKSYGIHVARLAGVPHKVTQRAKEVLQDIED---ESVISK 818
Query: 868 DA 869
++
Sbjct: 819 ES 820
>sp|A6TR79|MUTS_ALKMQ DNA mismatch repair protein MutS OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutS PE=3 SV=1
Length = 880
Score = 299 bits (765), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 329/612 (53%), Gaps = 58/612 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GAL Y + + +I YS+ M LD + L + E+ +K SL G+
Sbjct: 240 AAGALFHYLKTTQKRALEHINHINVYSIHEKMTLDINTRKNLELTETIRSKSKKGSLLGV 299
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L W++ PL+D IN RL+ VQ + LRQ+L++ LK+I D+ER
Sbjct: 300 LDKTSTA-MGGRMLRKWIEAPLIDPVIINKRLEAVQLLKEQIELRQELKESLKKIYDLER 358
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ-FSSLIKERYLDPLESLTDDDH 438
L + + ++ L S LP I + L++ +G+ F SL++ +DPL D+ H
Sbjct: 359 LAGKISYGSVTPRDLIALKNSLSYLPSIINGLEKIQGETFQSLVQS--IDPL----DEVH 412
Query: 439 LNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+LVE S+ L + G +I Y + LKN + I L ++ +
Sbjct: 413 -----SLVELSILEDAPLSSKDGG--IIQEGYHKEVDELKNASTEGRQWIAQLEQKERVN 465
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-- 552
+ K+LK+ FG+ ITK + T++I +T + ++ +LK+
Sbjct: 466 SGI---KSLKIKYNKIFGYYIEITKSNLSMV----PTEYIRKQTLANCERYVTPELKEIE 518
Query: 553 ---LGDQYQKVLEEYK---NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LG + + +L EY ++++ + + + T A ++ELDVL SFA++A
Sbjct: 519 SKILGAEEKVILLEYHLFIEVREKIAHEITRIQQT--------ARAIAELDVLYSFAEIA 570
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPN 665
+ + +P IN + I+ EG RHP VE + +F+PND + IITGPN
Sbjct: 571 AE--NNFIKPHINTSNEIKIV-EG-RHPVVELTFNKESFVPNDTYMDNRDCSMSIITGPN 626
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + +LMAQ+GSFVP ASI + D IF R+GA D +G STFM EM E
Sbjct: 627 MAGKSTYMRQVALIVLMAQIGSFVPASEASIGIVDRIFTRIGASDDLAQGHSTFMVEMSE 686
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
A+IL AT SL+I+DE+GRGTST+DG +AWA+ E++ + ++ TLF+TH+HELT L
Sbjct: 687 MANILNNATANSLVILDEIGRGTSTFDGLSIAWAVIEYMQQYKKSKTLFSTHYHELTELE 746
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
++ GV NY++ ++ ++ L KV G+ +S+GI VA+ A P +
Sbjct: 747 ---------GKIQGVKNYNIL--VEEDGEEIVFLRKVVSGSTSKSYGIQVAKLAGLPLNT 795
Query: 846 VTLAREKAAELE 857
+ A+E ++LE
Sbjct: 796 LIRAQEILSDLE 807
>sp|Q8CPF0|MUTS_STAES DNA mismatch repair protein MutS OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=mutS PE=3 SV=1
Length = 873
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>sp|Q5HPP5|MUTS_STAEQ DNA mismatch repair protein MutS OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=mutS PE=3 SV=1
Length = 873
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>sp|Q1IN52|MUTS_KORVE DNA mismatch repair protein MutS OS=Koribacter versatilis (strain
Ellin345) GN=mutS PE=3 SV=1
Length = 882
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 303/583 (51%), Gaps = 46/583 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESK-TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y + + LD+ +R L ++E T+ + +LF ++ T T MGKRLL W+ +P +D
Sbjct: 275 YERQNCLVLDAVTVRNLELIEPLFTNTGEGVTLFRALDATMTP-MGKRLLRAWMLRPSID 333
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+EINARLD ++ V DT R++LR+ + I DIERL+ + A + ++ L Q R
Sbjct: 334 TSEINARLDAIEMQVVDTLGREELRRAMDGILDIERLLSRVTLETANPRDLLALAQCFGR 393
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALV-ETSVDLDQLENGEYMI 462
LP +R+A+Q++ + L L D F LV E + L N ++
Sbjct: 394 LPKVRAAMQRFTSA-----RFLVLHGLLDDLADLRDRIFTTLVDEPPITL----NDGGVV 444
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
D L L+N + ++ I + ++ + +LK+ FG+ I+
Sbjct: 445 REGLDAALDELRNLSHNSKQFIAQIEERERKRTGI---GSLKIKFNNVFGYYLEISNAN- 500
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLK----KLGDQYQKVLEEYKNCQKELVNRVIQT 578
+ + +T + +FT +LK K+ D +K++E + EL +
Sbjct: 501 ---KHLAPADYERKQTLVNAERFTTPELKEYEAKVLDAQEKIVEIERRIFGELRTAIAAE 557
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
A + L+E+DVL +FA LA++ Y RP + G+ L +RHP +E
Sbjct: 558 A----RRVRQTGLALAEVDVLANFAHLAAT--RNYCRPKFD--QSGEFELIEARHPVIEL 609
Query: 639 QDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
+ F+PND L ++TGPNMGGKST++RQ + +MAQ+GSFVP A
Sbjct: 610 PELTGSADRFVPNDLYLNATTHTVIVLTGPNMGGKSTYLRQAALVAVMAQMGSFVPARSA 669
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+SV D +F R+GA D RG STFM EM ETA+IL ATDRSLI++DE+GRGTSTYDG
Sbjct: 670 RLSVVDRVFTRIGAADNLARGRSTFMVEMTETAAILNTATDRSLILLDEVGRGTSTYDGL 729
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
+AWA E L RA LFATH+HELT LA E + GV NYHVS + +
Sbjct: 730 AIAWACIEFLHARTRAKALFATHYHELTVLADE---------LSGVKNYHVS--VKESGG 778
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L +VEPGA D+S+GI VA+ A P V+ AR E E
Sbjct: 779 NVVFLRRVEPGAADKSYGIEVAKLAGLPAEVIERARAVLKEHE 821
>sp|Q2LUL3|MUTS_SYNAS DNA mismatch repair protein MutS OS=Syntrophus aciditrophicus
(strain SB) GN=mutS PE=3 SV=1
Length = 880
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 245/743 (32%), Positives = 364/743 (48%), Gaps = 70/743 (9%)
Query: 131 ANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGC 190
AN ++ + A+FP IGL ++D++ +++F D F E+ L AL
Sbjct: 125 ANLHAKENNFLAAVFPLEHH----IGLAFLDISTGEFRVSDFQDIRFF---ETELAALDF 177
Query: 191 KECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL 250
+E ++P + K K C L E F + L +R E + DL
Sbjct: 178 REIMVPQGSGKQGFLKAFAGRENSC--RLDEFPDEYFDRESALGRLQDYIRK--EDLEDL 233
Query: 251 VSGFEIAP---GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK 307
G + P GA GA+L Y E ++ YS Y+ LD A R L + ++
Sbjct: 234 --GLKDCPAVIGAAGAVLRYVEETQKSRLTHINRLQWYSAAEYLVLDETAKRNLELFKTI 291
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D SLF +++ T TA MG R L WL PL+D +I ARL V ++ R++L
Sbjct: 292 QDNRTAGSLFSVLDETVTA-MGGRRLRWWLNYPLVDPEKIKARLAAVAEIRENHLFRENL 350
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
R+ L + D+ERL + A + ++ L QS LP +++ L +S + +R
Sbjct: 351 RKVLSEVYDMERLAGRIALGVANGRDLIALKQSLKNLPVLKNLL----ADSNSFMLDRIQ 406
Query: 428 DPLESLTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
D ++ L D D + K I S + E G +I YD L R I +
Sbjct: 407 DGIDELPDLYDLIEKAIC---DSPPVTLREGG--IIKEGYDEERDRLFFMTRDGRRWIAA 461
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKD 541
L ++ + +LK+ FG+ I+K E +RK +T +
Sbjct: 462 LEEKERKRTGI---SSLKVGFNNVFGYYIEISKANSALAPEDYVRK---------QTLVN 509
Query: 542 GVKFTNTKLKKLGDQYQK-VLEEYKNCQK---ELVNRVIQTAVTFSEIFKSLATMLSELD 597
++ N +LK +Y+ VL C++ +L +V + A ++ AT+L++LD
Sbjct: 510 AERYINQELK----EYEATVLNAETRCREREYDLFMQVRECAAAEITRMQATATLLADLD 565
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKS 656
L S A++A Y P ++ D I ++ RHP VE + F+PND L ++
Sbjct: 566 ALASLAEVAEK--YNYCCPVVDLED--RIEIDVGRHPVVERMSLRDGFVPNDVVLDTDEN 621
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKST+IRQV + +LMAQ+GSFVP RA I V D IF R+GA D +RG
Sbjct: 622 RFLVITGPNMAGKSTYIRQVALIVLMAQMGSFVPSSRARIGVVDRIFTRIGAADSLIRGQ 681
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLF 774
STFM EM E A IL AT RSL+I+DE+GRGTST+DG +AWA+ E+L ++ I A TLF
Sbjct: 682 STFMVEMNEVAQILCHATGRSLVILDEVGRGTSTFDGLSIAWAVAEYLHDKNWIGARTLF 741
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATH+H+LT LA G NY+++ + ++ L K+ PG ++S+GI
Sbjct: 742 ATHYHQLTELAVAG---------TGYRNYNIA--VKEWGDRIIFLRKIVPGGTNRSYGIQ 790
Query: 835 VAEFANFPESVVTLAREKAAELE 857
VA A PE V+ ARE LE
Sbjct: 791 VARIAGVPEEVIVRAREILDNLE 813
>sp|A3DDI3|MUTS_CLOTH DNA mismatch repair protein MutS OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=mutS PE=3 SV=1
Length = 870
Score = 295 bits (756), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 330/624 (52%), Gaps = 64/624 (10%)
Query: 252 SGFEIAPGALGALLSYAELLS--DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+ F++ A GALL Y E + S+ N+ + Y ++ YM LD A R L + E+ +
Sbjct: 228 NAFDLYINASGALLEYLEQTQKVNLSHIQNFNV--YRIEEYMILDMATRRNLELTETMRE 285
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
N+ SL +++RT T+ MG R L W++QPL+++++I RLD V F + +R ++R+
Sbjct: 286 KNRKGSLLWVLDRTMTS-MGGRTLRKWIEQPLINLHDIKDRLDAVNEFKERFMIRSEVRE 344
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
L+ + DIERLM + A + ++ + S ++PYI+ L+ + + L +
Sbjct: 345 LLRAVYDIERLMTKVILGSANCRDLISIKHSIGQVPYIKELLRDLKADLNVL----SYNE 400
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
L++LTD + + + V + E G +I ++ + L++ + ++ I L
Sbjct: 401 LDTLTDVYEIIDKAIVDDPPVAVK--EGG--IIKEGFNEEVDRLRSASKDGKKWIAHLES 456
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + K LK+ FG+ +TK ++ +I +T + ++ +
Sbjct: 457 KERERTGI---KNLKVGFNKVFGYYIEVTKSYYSQV----PDDYIRKQTLANCERYITPE 509
Query: 550 LKKLGD------------QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
LK++ + +YQ ++ KE +NR+ K+ A L+ +D
Sbjct: 510 LKEIENTVLGAEDRLVELEYQIFVDVRNKVAKE-INRL-----------KTTARSLARID 557
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRG 654
VL S A++A YT P++ D I ++ RHP VE Q+ F+PND L
Sbjct: 558 VLCSLAEVADR--ESYTMPEVTDDD--KIEIKDGRHPVVEKIIGQE--AFVPNDTYLDMD 611
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
++ IITGPNM GKST++RQV + +LMAQ+GSFVP A I + D IF RVGA D
Sbjct: 612 ENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIFTRVGASDDLAA 671
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
G STFM EM E A+IL AT +SL+++DE+GRGTSTYDG +AWA+ E++ E+I A TLF
Sbjct: 672 GQSTFMVEMSEVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEYIGEKIGARTLF 731
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATH+HELT L +++ G+ NY +S ++ + L K+ G D S+G+
Sbjct: 732 ATHYHELTELE---------ERIEGIKNYCIS--VEEKGEDIIFLRKILRGGADNSYGVQ 780
Query: 835 VAEFANFPESVVTLAREKAAELED 858
VA A P+ V+ A+E +LED
Sbjct: 781 VARLAGIPDPVIHRAKEILKKLED 804
>sp|Q5L0E5|MUTS_GEOKA DNA mismatch repair protein MutS OS=Geobacillus kaustophilus
(strain HTA426) GN=mutS PE=3 SV=1
Length = 896
Score = 295 bits (756), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 305/577 (52%), Gaps = 38/577 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +D YM++D + L ++E+ + SL L++ T TA MG RLL WL +PL+D
Sbjct: 240 YQVDHYMKMDRHSKLHLELVETVRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPLIDR 298
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI RLD V+ RQ+LR L+ + DIERL+ + A + +V+L +S +++
Sbjct: 299 REIERRLDFVETLKTSYFERQELRDRLRGVYDIERLVGRVSYGNANARDLVQLKKSLLQV 358
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P +R + + + ER LDP E L D L+E S+ ++ G +
Sbjct: 359 PALRQTVGALPLAEADKLCER-LDPCEELVD---------LLERSIQEQPPLSVKEGN-L 407
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I YD L ++ + + I L A + + K+LK+ FG+ +TK
Sbjct: 408 IKDGYDKQLDRYRDASRNGKAWIAELE---AKEREATGIKSLKVGYNRVFGYYIEVTKPN 464
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 465 LPLVPE---GRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQ 521
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ ++LA ++ELDVL SFA ++ Y RP + V ++++G RHP VE
Sbjct: 522 YIPRLQTLAKAIAELDVLQSFATISDEYR--YVRPQFSTERV--LVIQGGRHPVVEKVLG 577
Query: 642 VN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + R + +ITGPNM GKST++RQV + +MAQ+G FVP +RA + + D
Sbjct: 578 AQMYVPNDCYMNREREML-LITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPIFD 636
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D G STFM EMLE + AT SLI+ DE+GRGTSTYDG LA AI
Sbjct: 637 QVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQAI 696
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ + I A TLF+TH+HELTAL + + ++N H A I+ K+ L+
Sbjct: 697 IEYIHDHIGAKTLFSTHYHELTAL---------ERSLPRLSNVHARA-IEENG-KVVFLH 745
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ G D+S+GIHVAE A P S++ AR AELE
Sbjct: 746 QIADGPADKSYGIHVAELAGLPASLIERARAILAELE 782
>sp|C5D9H5|MUTS_GEOSW DNA mismatch repair protein MutS OS=Geobacillus sp. (strain WCH70)
GN=mutS PE=3 SV=1
Length = 860
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 313/583 (53%), Gaps = 44/583 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ Y +D YM++D + R L + E+ + SL L++ T TA MG RLL WL +PL
Sbjct: 244 VQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPL 302
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
LD +I RL +V+ + RQ+LR+ L+ + D+ERL + + +++L +S
Sbjct: 303 LDRKQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARDLIQLKKSL 362
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ +++ + + + LDP L D L+E S+ + ++ G
Sbjct: 363 QQIPALKDIVEKLPDHEAKQLANK-LDPCSELVD---------LLERSIQENPPLSVKEG 412
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I Y+ L ++ + + I L + + +L K+LK+ FG+ +T
Sbjct: 413 N-IIKDGYNETLDRYRDASRNGKAWIAQLE---SKERELTGIKSLKIGYNRVFGYYIEVT 468
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K P + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 469 K---PNLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFVDIRER 525
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ +SLA +SELDVL SFA ++ Y +P + D ++I++ RHP VE
Sbjct: 526 VKQYIPRLQSLAKTISELDVLQSFATVSEE--RHYVKPQFS--DNRELIIQAGRHPVVEK 581
Query: 638 ---AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
AQ +V PNDC + + + +ITGPNM GKST++RQ+ + ++MAQ+G FVP ++A
Sbjct: 582 VLGAQTYV---PNDCYMNKERELL-LITGPNMSGKSTYMRQIALTVIMAQIGCFVPAEKA 637
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTYDG
Sbjct: 638 VLPIFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGM 697
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
LA AI E++ + I A TLF+TH+HELT L + + + N HV A ++
Sbjct: 698 ALAQAIIEYIHDHIGAKTLFSTHYHELTDLE---------QSLAKLKNVHVRAVEENG-- 746
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
K+ L+K+E G DQS+GIHVAE A P S++ A+E AELE
Sbjct: 747 KVVFLHKIEEGPADQSYGIHVAELAELPASLIQRAKEILAELE 789
>sp|C3KX35|MUTS_CLOB6 DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
657 / Type Ba4) GN=mutS PE=3 SV=1
Length = 932
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 324/604 (53%), Gaps = 49/604 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL++
Sbjct: 255 YSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPLINK 313
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S ++
Sbjct: 314 NPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSIGKV 373
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLENGEY 460
PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 374 PYIKKYLSSFKSDLF-LNMEKCIDTLEDIHKLLDKALLDNPSLSVKEGNI---------- 422
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 423 -IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITK- 477
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 478 --ANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIE 535
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQ 639
+ + A ++S++D L S A +A Y +P+IN D +I++E RHP VE
Sbjct: 536 ENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIEEGRHPVVEKVI 591
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+IS+
Sbjct: 592 PKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISIC 651
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +AW+
Sbjct: 652 DKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWS 711
Query: 760 ICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E++ + +R TLFATH+HELT L + GV NY VS + ++
Sbjct: 712 VIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELENEIV 760
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPSAVISDDA 869
L K+ G DQS+GI VA+ A P V+ A+E +E + TPS
Sbjct: 761 FLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPSKEYKSKD 820
Query: 870 KIEV 873
IEV
Sbjct: 821 YIEV 824
>sp|Q4L5Z9|MUTS_STAHJ DNA mismatch repair protein MutS OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=mutS PE=3 SV=1
Length = 883
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 320/608 (52%), Gaps = 60/608 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y+ +M++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 242 YAAVDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLINK 300
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I RL IV++F++ R LR +L ++ DIERL+ + + +++L S +
Sbjct: 301 ERIEERLSIVESFMNHFIERDTLRGYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEI 360
Query: 405 PYIRSALQQYE----GQFSSLIKERYLDPLESLTD--DDHLNKFIALVETSVDLDQLENG 458
P I+S L+ QFSSL +PLE L +D L + E + +
Sbjct: 361 PNIKSLLESMNDVASNQFSSL------EPLEDLLQVLEDSL-----IEEPPISIKDGGLF 409
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ S D L A KN ++ L + ++T K+LK+ FG+ IT
Sbjct: 410 KQGFSKQLDEYLEASKNGKDWLAQLQAKERERTGI-------KSLKISFNKVFGYFIEIT 462
Query: 519 KKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
+ EP + +T + +F +LK+ D ++ + + +L R
Sbjct: 463 RANLQGFEPS-----KFGYHRKQTLSNAERFITDELKEKEDIILGAEDKAVDLEYQLFVR 517
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+ + T++E + A ++SELD L SFA++A Y +P+ + D + LE SRHP
Sbjct: 518 LREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPEFS--DNKTLSLENSRHP 573
Query: 635 CVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE D+ +++PNDCKL + ++ +ITGPNM GKST++RQV + +MAQ+G++VPC++
Sbjct: 574 VVERVMDYNDYVPNDCKLDKD-NFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCNK 632
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTYDG
Sbjct: 633 AELPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDG 692
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
LA A+ E++ + A TLF+TH+HELT L E + + N HV+A D
Sbjct: 693 LALAQAMIEYVAQTSHAKTLFSTHYHELTTLDQE---------LPSLKNVHVAA--DEYQ 741
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR---------EKAAELEDFTPSAV 864
+L L+KV+ GA D S+GI VA+ AN P+ V+ A+ + ++ E+ + V
Sbjct: 742 GELIFLHKVKDGAVDDSYGIQVAKLANLPDEVINRAQVILDAFEQSQNTSDNEEHSNITV 801
Query: 865 ISDDAKIE 872
+ D A +E
Sbjct: 802 LKDSASVE 809
>sp|Q8CXG6|MUTS_OCEIH DNA mismatch repair protein MutS OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=mutS PE=3 SV=1
Length = 867
Score = 294 bits (752), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 316/608 (51%), Gaps = 49/608 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A LL+Y + S + L YM LD + R L + E+ +K+ SL +
Sbjct: 223 AFSRLLNYIQTTQKRSLHHLQKAEVIELKKYMSLDMYSKRNLELTETIMKKSKHGSLLWV 282
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L WL++PLL +IN RL++VQ F D R+ LR LK + D+ER
Sbjct: 283 LDKTVTA-MGARTLKKWLERPLLSKQKINERLEVVQGFYDGFMERESLRDLLKSVYDLER 341
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP---LESLTDD 436
L + + +++L QS R+P I+ L+Q++ + + E + P +ESL
Sbjct: 342 LSGRIAFGNVNARDLIQLKQSLSRIPAIQETLRQFDQPEITRLAEMLIYPEQMVESLEKS 401
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
I++ E S +I Y L ++ + ++ I L Q +
Sbjct: 402 IVDEPPISIKEGS-----------LIKEGYHDQLDTYRDASRNGKKWIAQLEHQEREETG 450
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ ++LK+ FG+ ITK P + ++ +T + +F N +LK +
Sbjct: 451 I---RSLKVGYNRVFGYYIEITK---PNLHLLPEGRYERRQTLTNAERFVNEELK----E 500
Query: 557 YQKVLEEYKNCQKEL-VNRVIQTAVTFSE---IFKSLATMLSELDVLLSFADLASSCPTP 612
+K++ E + EL + IQ E + + LA ++S++DVL SFA ++ S
Sbjct: 501 KEKLILEAEEKSVELEYDLFIQIRDQIKEEIPLIQQLAHIISQMDVLQSFATVSES--NN 558
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y RPD N + + RHP VE +D F+PND + ++ +ITGPNM GKS
Sbjct: 559 YVRPDFNDEQLQ---VTKGRHPVVEQVMKDGT-FVPNDVVFDKSQNML-LITGPNMSGKS 613
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQV + +M Q+G F+P ++A++ V D IF R+GA D + G STFM EMLE +
Sbjct: 614 TYMRQVALTSIMGQIGCFIPAEQATLCVFDQIFTRIGAADDLVSGQSTFMVEMLEARHAI 673
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
ATDRSLI++DE+GRGTSTYDG LA AI E++ I A TLF+TH+HELTAL
Sbjct: 674 SNATDRSLILLDEIGRGTSTYDGMALAQAIVEYIHHNIAAKTLFSTHYHELTALE----- 728
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ + N HV A + + L++++ GA DQS+GIHVA+ A+ P ++ A
Sbjct: 729 ----DSLHHLKNIHVRA--EEHEGNVVFLHQIKEGAADQSYGIHVAKLADLPNELIERAS 782
Query: 851 EKAAELED 858
ELED
Sbjct: 783 VILEELED 790
>sp|A5I2S2|MUTS_CLOBH DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Hall / ATCC 3502 / NCTC 13319 / Type A) GN=mutS PE=3
SV=1
Length = 932
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 322/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL +++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWALDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKEYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIKGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>sp|A7FUL0|MUTS_CLOB1 DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=mutS PE=3 SV=1
Length = 932
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 322/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL +++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWALDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKEYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIKGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>sp|A7GE45|MUTS_CLOBL DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=mutS PE=3 SV=1
Length = 932
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 323/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSGFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>sp|Q0AYB5|MUTS_SYNWW DNA mismatch repair protein MutS OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=mutS PE=3 SV=1
Length = 859
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 245/836 (29%), Positives = 394/836 (47%), Gaps = 63/836 (7%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD----ALSSVSVSKNMFETIA 89
A+ FF D+Y E+A ++ TA R G GS + SV + I
Sbjct: 21 AILFFRLGDFYEMFFEDARIASRELEIVLTA-RDGGAGSKIPMCGVPYHSVDNYLARLIN 79
Query: 90 RDLLLERTDHTLELYEGSGSNWRLV-KSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNF 148
R + + + E G R V + TPG + + + A N
Sbjct: 80 RGYKVAICEQVEDPREAKGIVKREVTRIVTPGTIIEEQLLDQAKNN---------FLAAV 130
Query: 149 RENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTL 208
E G+ Y+D++ L+E ++ + VES ++ + ECLL + +
Sbjct: 131 EEEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEILRISPAECLLAGSGSLTGSWE-- 188
Query: 209 RDALTRCGVMLT---ERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALL 265
+ L + + LT E + + L+ L +L S+E + + A ++
Sbjct: 189 EEWLRQQNITLTVWDELPLSLERAESLL--LRQLQVASLESFG--LKSYSAGIKAAARII 244
Query: 266 SYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
++ E S +R YS D+++ +D + R L + + + + SL +++ + T
Sbjct: 245 AFLEETQKTSLQHIKSLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRT 304
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MGKRLL W++QPL + EI RLD V + +LR +L L RI+D+ERL +
Sbjct: 305 A-MGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTPLLSRINDLERLGGKIG 363
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
A + ++ L S + I+ ALQ + L+ L D L + AL
Sbjct: 364 ASVASPRDLLGLKSSLAVINDIKKALQPCRSEI-----------LQRLAAMDALEEVFAL 412
Query: 446 VETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
++ S++ + ++ GE +I + Y + L+ + + + + K
Sbjct: 413 IDASINDEAPLGIKEGE-LIKTGYKQEIDELRELSQEGSNWLVEFENREKQRTGI---KN 468
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LK+ FG+ ITK + +T + +F + +LK+ ++ E
Sbjct: 469 LKVGFNKVFGYYIEITKSN----LSLAPADYHRKQTLVNSERFISDELKQYEEKILGSRE 524
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+ + + ++ + + + A ++ LDVL A++A Y RP+I+ +
Sbjct: 525 RLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDVLQGLAEVAYQ--NNYIRPEID--N 580
Query: 623 VGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G I + RHP VE A F+PND +L R K+ F IITGPNMGGKSTF+RQ + +L
Sbjct: 581 SGKIRIRAGRHPVVEKALREARFVPNDLQLDRDKARFAIITGPNMGGKSTFMRQAALLVL 640
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+GSF+P + A I + D IF RVGA D G STFM EM+E A+IL A+D SL+I+
Sbjct: 641 MAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIEVANILNNASDNSLVIL 700
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DE+GRGTSTYDG +A A+ E+L+E R+ LFATH+H+LT LA +++ G+
Sbjct: 701 DEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLA---------EKLPGII 751
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N VS + T + L KV PG D+S+G+HVA A PE ++ A + LE
Sbjct: 752 NLSVS--VKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRAEDILQGLE 805
>sp|C1FNT9|MUTS_CLOBJ DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=mutS PE=3 SV=1
Length = 932
Score = 293 bits (750), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 322/589 (54%), Gaps = 59/589 (10%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL++
Sbjct: 255 YSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPLINK 313
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S ++
Sbjct: 314 NPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSIGKV 373
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLENGEY 460
PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 374 PYIKKYLSGFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI---------- 422
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 423 -IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITKA 478
Query: 521 ------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
E IRK+ + ++I E ++ K + +KL D K+ E ++ +E
Sbjct: 479 NLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFIEEN 537
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
++R+ +TA ++S++D L S A +A Y +P+IN D +I++E
Sbjct: 538 IDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIEEG 582
Query: 632 RHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP
Sbjct: 583 RHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVP 642
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
+A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTST
Sbjct: 643 AKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTST 702
Query: 751 YDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
YDG +AW++ E++ + +R TLFATH+HELT L + GV NY VS
Sbjct: 703 YDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS-- 751
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 752 VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>sp|Q187T6|MUTS_CLOD6 DNA mismatch repair protein MutS OS=Clostridium difficile (strain
630) GN=mutS PE=3 SV=2
Length = 947
Score = 293 bits (749), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 36/572 (6%)
Query: 290 YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
YM LD L + ++ K SL ++++T TA MG RLL ++++PL++ ++I
Sbjct: 264 YMVLDMFTRTNLELTQTIRGNKKKGSLLHVLDKTSTA-MGGRLLRKYVEEPLINKSKIEN 322
Query: 350 RLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
RLD+++ DD LR+DL LK I DIER+ + R ++++ L S +LP ++
Sbjct: 323 RLDVIEEIKDDFILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKD 382
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+ + ++KE Y+ ++ L D +L L E ++ +++G +I S +
Sbjct: 383 TINLSNAK---ILKE-YVSEMDKLDDIYNLIDEAILEEPTI---TIKDGN-IIKSDFSDE 434
Query: 470 LSALKNEQES---LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ L ++I + ++ K+LK+ FG+ ITK +
Sbjct: 435 LKELREISKNGAFLVKEIENREREKTGV------KSLKIGFNKVFGYYIEITKANFK--Q 486
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
KL +I +T + ++ +LK++ ++ E+ K+ + E+ + T +
Sbjct: 487 AKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIKSLEYEIFVEIRDTIYKNIDRI 546
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFI 645
+ +A ++ +DV +S A +A Y +P IN + DI RHP VE NF+
Sbjct: 547 QKVAKTIANIDVFVSLATVAH--INNYVKPAINENNKLDI--RNGRHPVVENIVGEENFV 602
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
PND L RG++ IITGPNM GKST++RQ + LMA +GSFVP + A I + D IF R
Sbjct: 603 PNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRIFTR 662
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D +G STFM EM E + ILK AT+RSL+I+DE+GRGTSTYDG LAW+I E++
Sbjct: 663 VGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEYIQ 722
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+ IR TLFATH+HELT L E V NY ++ D + L K+ P
Sbjct: 723 KNIRCKTLFATHYHELTDLEEE---------FKEVKNYSIAVKEDGEG--IIFLRKIIPQ 771
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A P+ V+ A+ +LE
Sbjct: 772 GADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>sp|A7GR99|MUTS_BACCN DNA mismatch repair protein MutS OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=mutS PE=3 SV=1
Length = 895
Score = 293 bits (749), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 320/588 (54%), Gaps = 60/588 (10%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + +M++D + R L + E+ K SL L+++T TA MG R+L W+++PL+
Sbjct: 248 YYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQK 306
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I RL++V+ FV+D LR+DL++ LK + D+ERL + + +++L +S ++
Sbjct: 307 EKIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAYGSVNARDLLQLKRSLQQV 366
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTD--DDHLNKFIALVETSVDLDQLENG---- 458
P I A+ + +++ + E DP E+LT D + + L + D D +++G
Sbjct: 367 PAILEAISLLDNSYAAKLIEG-ADPCEALTKLLDRSIQENPPL--SVKDGDIIKDGYNEK 423
Query: 459 --EY-MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
EY IS + T ++ L E ER+I + K+LK+ FG+
Sbjct: 424 LDEYRYISKNGKTWIAEL----EKREREITGI-------------KSLKIGYNRIFGYYI 466
Query: 516 RITKKE-----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
+TK E + +K +T + +F +LK+ + E+ + +
Sbjct: 467 EVTKANLSLLPEGRYERK--------QTLANAERFITDELKEKETLILEAEEKIVQLEYD 518
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEG 630
L + + F + LA ++SELDVL SFA ++ + +P + + +I ++
Sbjct: 519 LFTALREEVKVFIPKLQHLAKVISELDVLQSFATVSEE--ERFVKPVLT--NKREIFIKD 574
Query: 631 SRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
RHP VE D ++PNDC + F +ITGPNM GKST++RQ+ + +MAQ+G FV
Sbjct: 575 GRHPVVEKVLDGKLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALVTIMAQIGCFV 633
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P A + V D IF R+GA D + G STFM EMLE + + A++RSLI+ DE+GRGTS
Sbjct: 634 PATEAILPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTS 693
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDG LA AI EH+ ++I A TLF+TH+HELT L + + + N HVSA I
Sbjct: 694 TYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLE---------ESLTHLKNVHVSA-I 743
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ K+ L+K++ GA D+S+GIHVA+ A P+S++ A+E A+LE
Sbjct: 744 EEDG-KVVFLHKIQEGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 790
>sp|C6DZZ3|MUTS_GEOSM DNA mismatch repair protein MutS OS=Geobacter sp. (strain M21)
GN=mutS PE=3 SV=1
Length = 869
Score = 292 bits (748), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 231/723 (31%), Positives = 357/723 (49%), Gaps = 66/723 (9%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ EF T ++ AL C+ P E + C
Sbjct: 134 DGECYGLSYLDLST-----GEF----RVTELDGLQAALAEVTCIGPREIILPV-CFREEP 183
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLD---RLVRGSVEPVRDLVSGFEIAPGAL---GAL 264
++ +R T F+ + V D D RLV + G + P AL GA+
Sbjct: 184 KRKEVAHVIVDRSITYFE--EWVYDPDYCKRLVANQFKGATAESLGCDRLPTALLAAGAV 241
Query: 265 LSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNR 322
L Y L+ + + + I Y+ ++ LD + R L + + ++ + SL GLM+R
Sbjct: 242 LHY--LVDTQKGHAPHVTCITPYNESEHLLLDESTRRNLELTATLSEGKRKGSLLGLMDR 299
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMH 382
T TA MG R L W+ PL+D+ +I R D +Q ++ R+ ++ L + D+ERL
Sbjct: 300 TVTA-MGGRKLKQWINYPLMDLKKIWLRQDAIQELMEAPGTREAMKSLLAGVYDLERLNG 358
Query: 383 NLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE--RYLDPLESLTDDDHLN 440
+ A + + L S RLP I+ +Q + L+KE +DPL+ L+D
Sbjct: 359 RISLASASAKDLSALRSSLSRLPAIK---EQVAACGAGLLKELDAGIDPLDELSD----- 410
Query: 441 KFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
L+ +++ D L +G +I+ Y+ L L+ + I L Q +
Sbjct: 411 ----LISSAIVDDPPFVLRDGG-IIADGYNQELDELRAISREGKGFIARLEAQEKGRTGI 465
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+LK+ FG+ +TK I +I +T + ++ +LK+ ++
Sbjct: 466 ---SSLKIRYNKVFGYYIEVTKANVSAI----PDDYIRRQTLANAERYITPELKEYEEKV 518
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ K+ + L V + A E A L+ LDVL+S ++LA Y RP+
Sbjct: 519 LGAEDRIKDLEFSLFQEVREAAAAQGERIARSADRLACLDVLVSLSELAHD--KGYCRPE 576
Query: 618 INPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
++ + ++ + RHP +E F+PND L G++ IITGPNM GKSTF+RQV
Sbjct: 577 VH--EGSELSITEGRHPVIEDMHSAERFVPNDTLLDNGENQLIIITGPNMAGKSTFMRQV 634
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ LMAQ+GSFVP D+A I + D IF RVGA D RG STFM EM+E+A+IL+GAT R
Sbjct: 635 ALISLMAQMGSFVPADKALIPLVDRIFTRVGASDNLARGHSTFMVEMMESAAILRGATAR 694
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEI--RAPTLFATHFHELTALAHENANEFNT 794
SL+I+DE+GRGTST+DG +AWA+ E L + A TLFATH+HELT LA
Sbjct: 695 SLVILDEIGRGTSTFDGVSIAWAVAEFLHDNKIHAAKTLFATHYHELTELAVTRP----- 749
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
G+ N++++ + + ++ L K+ PG S+GI VA A P++V+ A+E
Sbjct: 750 ----GIKNFNIA--VREWNERIIFLRKIVPGGASHSYGIQVARLAGLPQAVIDRAKEILI 803
Query: 855 ELE 857
LE
Sbjct: 804 NLE 806
>sp|C0QPF0|MUTS_PERMH DNA mismatch repair protein MutS OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=mutS PE=3 SV=1
Length = 870
Score = 292 bits (748), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 306/570 (53%), Gaps = 38/570 (6%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y DSY+RLD +A + L ++ + N L +M+RT T GMG+R L +L PL
Sbjct: 253 KPYREDSYVRLDYSAQKHLEIV---SPNEGNIPLLRVMDRTLT-GMGRRKLRFFLLHPLK 308
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
+ EI R + V V++T LR+ +R L +I DIERL+ + + + +V L +S
Sbjct: 309 NSKEIIKRQNAVTELVENTELREKIRDILDQIFDIERLISKISSNTSTPRDLVGLRESLK 368
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL-NKFIALVETSVDLDQLENGEYM 461
++ ++ ++ + S L+KE + E + D L K +E + E G +
Sbjct: 369 KVSKLKEISKEIK---SDLLKESF----ERIEDYSWLIEKLDRYLEDDPPIHLKEGG--L 419
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I D L LK +E + S ++ + + ++LK+ G+ +TK
Sbjct: 420 IKKGVDKDLDELKEIKEKGNEWLKSYQEKLRKETGI---QSLKIGFNKVMGYYIEVTK-- 474
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + K + F +T + +F +L+ ++ E+ K + E+ R+ +
Sbjct: 475 -PNL-KLVPDHFRRRQTLSNAERFITDELQSFEEKILSADEKIKALEYEIFMRIREEVAF 532
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
S+ A + +D + S A +A +T+PDI+ D +I ++ HP ++ +
Sbjct: 533 LSDRIGKTAQQVGMIDAIQSLAQIA--VEKGWTKPDIH--DGYEIEIKEGYHPVIK-EFM 587
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+F+PN+ K+ R S+F IITGPNM GKSTFIRQ + IL+AQ GS++P + I V D
Sbjct: 588 PDFVPNNLKMNRN-SYFHIITGPNMAGKSTFIRQSAIIILLAQTGSYIPAKKGKIGVVDA 646
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF R+G+GD +G+STFM EMLE A+I+ AT+RS I++DE+GRGTSTYDG + WAI
Sbjct: 647 IFTRIGSGDALAKGLSTFMVEMLEMANIVNNATERSFIVLDEVGRGTSTYDGLSIGWAIS 706
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E+L E+++ TLFATH+HELT L E + GV N+H+ D + K LY+
Sbjct: 707 EYLAEKVKVKTLFATHYHELTQLERE---------IKGVKNFHMDIFEDGENIKF--LYR 755
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLARE 851
V+ G ++S+G+HVA+ A E ++ A E
Sbjct: 756 VKEGFSNKSYGVHVAKLAGIKEQIIKRAYE 785
>sp|Q97I19|MUTS_CLOAB DNA mismatch repair protein MutS OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutS PE=3 SV=1
Length = 869
Score = 292 bits (747), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 327/604 (54%), Gaps = 50/604 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++KY + ++ +D + R L + E+ D +K SL ++++T TA MG R + W+++PL
Sbjct: 251 LQKYEIVDFLSIDINSRRNLELTETLKDKSKKGSLLWVLDKTSTA-MGGRQIRKWIERPL 309
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D +IN RLD V+ + + + +DL++ LK++ DIERL + + ++++ L S
Sbjct: 310 IDDEKINLRLDAVEEMLTNVSYNEDLKELLKQVYDIERLAGKISSKSVNAKEMISLRGSI 369
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
+LP I+ ++ + + L +E+ DD L L+ S++ + ++ G
Sbjct: 370 EKLPAIKKLIKNFNSEL--------LVNMENALDD--LGDIYKLLYESINDNPSLSIKEG 419
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I Y+ + L+ + ++ I SL ++ ++ K+LK+ FG+ IT
Sbjct: 420 N-IIKEGYNKDIDELRLAKSHGKQWIASLEN---TEREVTGIKSLKVSYNKVFGYYIEIT 475
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVN 573
K + + ++I +T + ++ +LK+ LG + + VL EY N E+
Sbjct: 476 KSNLNLVPE---GRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEY-NVFCEIRE 531
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRH 633
R+ + + K A +LSELD + SFAD+A Y +P I G ++++ RH
Sbjct: 532 RIEKEI----DRIKGSAKILSELDCICSFADVARE--NNYCKPVIKRD--GTLVIKEGRH 583
Query: 634 PCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
P VE NF+ ND + + +ITGPNM GKST++RQVG+ +LMAQ+G FVP
Sbjct: 584 PVVEKVIASGNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPAS 643
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A IS+ D IF R+GA D G STFM EM E + ILK AT SLI++DE+GRGTSTYD
Sbjct: 644 AAEISICDKIFTRIGASDDLNAGKSTFMVEMWEVSHILKNATKNSLILLDEVGRGTSTYD 703
Query: 753 GFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
G +AW++ E++ E ++ TLFATH+HELT L E + G+ NY ++ +
Sbjct: 704 GLSIAWSVIEYICKSENLKCKTLFATHYHELTKLEGE---------IEGLKNYSIA--VK 752
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP-SAVISDDA 869
+ + L K+ D+S+GI VA+ A PE V+ ARE +LE+ P +A ++D
Sbjct: 753 KVNDDIIFLRKIISKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAKPKTAENTEDK 812
Query: 870 KIEV 873
K +
Sbjct: 813 KTNI 816
>sp|Q895H2|MUTS_CLOTE DNA mismatch repair protein MutS OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutS PE=3 SV=1
Length = 881
Score = 292 bits (747), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 190/595 (31%), Positives = 323/595 (54%), Gaps = 41/595 (6%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y++ Y+ +D + R L + E+ D ++ SL ++++ C+ MG RL+ W++QPL+
Sbjct: 250 KNYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDK-CSTAMGARLIRNWVEQPLI 308
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
+ +I+ RL+ V+ V + +L +DL+ LK I DI+R++ + + ++++ L S
Sbjct: 309 NKEKIDKRLNAVEELVLNISLHEDLKDALKDIYDIQRIVGKISSKNVNAKELLSLKNSIE 368
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ----LENG 458
+LPYI+ L + E + D L +L D L L+E+S+ +D +++G
Sbjct: 369 KLPYIKDILSKLEADL-------FKDMLSNL---DELKDIYELLESSI-MDNPPITIKDG 417
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I + ++ + L+ + + I +L +S+ + K+LK+ FG+ +T
Sbjct: 418 N-LIKNGFNKEIDELRMAKSHGKEWIANLE---SSEREFTGIKSLKVGYNKVFGYFIEVT 473
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I +++ +T + ++ +LK++ D+ E+ + + E+ + +
Sbjct: 474 K---SNISSVPEGRYVRKQTLSNCERYITPELKEMEDKILGAEEKLISLEYEVFVSIRNS 530
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ K A +++ LD L S + +A Y++P I + DII++ RHP VE
Sbjct: 531 IEKDIDRMKISANIVAILDCLSSLSTVA--LENNYSKPKI--LEGNDIIIKDGRHPVVEK 586
Query: 639 QDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
+F+ ND + + +ITGPNM GKST++RQV + +MAQ+GSFVP ASIS
Sbjct: 587 MIPTGSFVANDTTMDTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASIS 646
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF R+GA D G STFM EM E ++ILK AT +SLII+DE+GRGTST+DG +A
Sbjct: 647 LCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIA 706
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
WA+ E++ + +R+ TLFATH+HEL L + ++ GV NY VS + +
Sbjct: 707 WAVIEYICNNKNLRSKTLFATHYHELIQLEN---------KIKGVKNYSVS--VKEMDKD 755
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAK 870
+ L K+ G DQS+GI VA+ A PE V+ A+E +E + + DD K
Sbjct: 756 IVFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEILNSIEQNKDNKIELDDIK 810
>sp|B1IM68|MUTS_CLOBK DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Okra / Type B1) GN=mutS PE=3 SV=1
Length = 932
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 321/593 (54%), Gaps = 49/593 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL++
Sbjct: 255 YSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPLINK 313
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S ++
Sbjct: 314 NPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSIGKV 373
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLENGEY 460
PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 374 PYIKKYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI---------- 422
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 423 -IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITK- 477
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 478 --ANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIE 535
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQ 639
+ + A ++S++D L S A +A Y +P+IN + +I++E RHP VE
Sbjct: 536 ENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKN--EILIEEGRHPVVEKVI 591
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+IS+
Sbjct: 592 PKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISIC 651
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +AW+
Sbjct: 652 DKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWS 711
Query: 760 ICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E++ + +R TLFATH+HELT L + GV NY VS + ++
Sbjct: 712 VIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELENEIV 760
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPS 862
L K+ G DQS+GI VA+ A P V+ A+E +E + TPS
Sbjct: 761 FLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPS 813
>sp|Q6MBV4|MUTS_PARUW DNA mismatch repair protein MutS OS=Protochlamydia amoebophila
(strain UWE25) GN=mutS PE=3 SV=1
Length = 858
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 256/871 (29%), Positives = 411/871 (47%), Gaps = 75/871 (8%)
Query: 2 DDEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHT 61
D EQ+ L E K+ + K + D A+ FF D+Y A E+A ++K T
Sbjct: 14 DFEQHSLDESKISPMMMQWHAC--KKMAGD--AILFFRMGDFYEAFYEDAHLLSKELELT 69
Query: 62 TTALRQLGTG------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVK 115
T +++ S+ V+K IA + + L E R+V
Sbjct: 70 LTKRQEIPMSGIPFHTSEGYIDKLVAKGFRVAIAEQIEDPKKTKGLVKREVV----RVVS 125
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDD 175
GT N D NN F + G GL ++DLT ++EF +
Sbjct: 126 PGTVINSSLLSD---KNNN---------FFAALVKVGQIFGLAFLDLTTGEYWVSEFTQE 173
Query: 176 SHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
N L L E L +E K + ++ + +F+ + Q
Sbjct: 174 RELLN---ELYRLHPAE-FLTSEKFKEKHASLFEEMQQTYSFLVNTLEDWQFEHQ---QA 226
Query: 236 LDRLVRG-SVEPVRDL-VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
D L+ V+ + +SG A A GALL+Y + IR YS +M L
Sbjct: 227 HDFLINHFKVQRLDGFGLSGMVAAINAAGALLNYLQETLCLPIQHIQSIRCYSSSQFMML 286
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
D R L + S D ++ +L G++++T T MG RL+H W+KQPLL V+EI+ R +
Sbjct: 287 DRMTQRNLELTHSLQDGSRRHTLLGVIDQTQTP-MGARLMHHWVKQPLLKVSEIHQRQNG 345
Query: 354 VQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+QA ++ + L+ +I DIERLM + A + ++ L+ S + +I+S L
Sbjct: 346 IQALLNHEHIVDQLQNLFLQIKDIERLMMKVSACYATPRDLIALHFSFKPIAFIKSLLLN 405
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS-VDLDQLENGE-YMISSSYDTGLS 471
++ + ++ LDP L+K AL+ + V+ L GE + L
Sbjct: 406 IPSEWINEHAQK-LDP---------LSKMNALISNAIVEEPPLRLGEGKTFRQGFHRELD 455
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + + Q + + K LK+ FG+ +++ + K+
Sbjct: 456 ELREISHDSKAWMARYQTQIREETGI---KTLKVGFNKMFGYFIEVSRGQ----IDKMPD 508
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
FI +T + ++ +LK+ + E + + EL +++ ++++ +A
Sbjct: 509 HFIRRQTLVNAERYITPELKEYESKVLTAEERINSIESELFHQLRLEVASYTKNVLEVAQ 568
Query: 592 MLSELDVLLSFADLASS-CPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDC 649
L+++D L+S ++A C YT P I+ D +++E RHP +E FIPND
Sbjct: 569 ALAKIDCLISLTNVAKKYC---YTCPVID--DSSILVIEEGRHPVIETVCRHEKFIPNDT 623
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L + +ITGPNM GKST++RQV + +++AQ+GSFVP +A I + D +F R+GA
Sbjct: 624 YLDDQANRLLLITGPNMAGKSTYLRQVALIVILAQIGSFVPAAKAHIGIIDKVFTRIGAS 683
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EE 767
D RG STFM EM ETA+IL AT +SL+I+DE+GRGTSTYDG +AW++ E+L+ E+
Sbjct: 684 DDLSRGQSTFMVEMTETANILNNATSQSLVILDEIGRGTSTYDGISIAWSVAEYLLTTEK 743
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
A TLFATH+ ELT L +++ G NY+V+ H +T L K+ G
Sbjct: 744 RMAKTLFATHYWELTKLE---------EKVPGAVNYNVAVH--EADDHITFLRKIIKGGT 792
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELED 858
D+S+GIHVA A P++V+ ++E LE+
Sbjct: 793 DKSYGIHVARLAGLPQAVLNRSKEILEHLEE 823
>sp|B3E6P2|MUTS_GEOLS DNA mismatch repair protein MutS OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=mutS PE=3 SV=1
Length = 872
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 209/578 (36%), Positives = 307/578 (53%), Gaps = 42/578 (7%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
+ ++ LD A R L + + TD K+ SL G ++RT TA MG R L WL PL+ V I
Sbjct: 267 NDHLALDPATRRNLELTATMTDNKKSGSLLGCLDRTATA-MGARTLKQWLSYPLVQVAPI 325
Query: 348 NARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYI 407
RL+ V+ ++ AL+ LR+ LK + D+ERL + AG + + L+ S ++P I
Sbjct: 326 RRRLEAVEELKENPALQDQLREQLKGVHDLERLNGRVSMAGAGGRDLRSLHDSLEQVPQI 385
Query: 408 RSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
R AL + + E LDPL+ + +N+ IA + E G +I+ Y
Sbjct: 386 RLALTEATAPLLRDLTEE-LDPLQDIRS--LINQAIA---PAPPFSLREGG--IIADGYH 437
Query: 468 TGLSALKNEQESLERQIHS-LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ R+ + + A + D +LK+ FG+ +TK +
Sbjct: 438 AELDELR----AISREGKGYIARMEAQERDRTGISSLKIRYNKVFGYYIEVTKSNLSSV- 492
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL-EEYKNCQKE--LVNRVIQTAVTFS 583
+I +T G ++ +LK +KVL E + C+ E L V +
Sbjct: 493 ---PDNYIRRQTIATGERYITEELKSY---EEKVLGAEDRICELEYTLFQEVRERTAAQG 546
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW-V 642
A+ L+ LDVL S A +A Y +P ++ D +II EG RHP VEA +
Sbjct: 547 GRVSRTASALASLDVLASLALVAQE--RDYCKPVVDDGDTLEII-EG-RHPVVEAMNLGE 602
Query: 643 NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCI 702
F+PND +L + + +ITGPNM GKST++RQV + LMAQVGSFVP RA+I + D I
Sbjct: 603 RFVPNDTRLDQEQHQLLMITGPNMAGKSTYMRQVALITLMAQVGSFVPASRATIGIADQI 662
Query: 703 FARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE 762
F RVGAGD RG STFM EM+ETA IL+ AT +SL+++DE+GRGTST+DG +AWA+ E
Sbjct: 663 FTRVGAGDNLARGQSTFMVEMMETAHILRSATTKSLVVLDEIGRGTSTFDGLSIAWAVAE 722
Query: 763 HL--VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
+L +A TLFATH+HEL LA T++ G+ N V+ + + ++ L
Sbjct: 723 YLHDTNHCKARTLFATHYHELADLA-------ATRE--GITNLTVA--VKEWNDQVIFLR 771
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ PGA S+GI VA A P +V+ A+E LE+
Sbjct: 772 TIIPGAASHSYGIQVARLAGMPRNVIERAKEVLKTLEE 809
>sp|Q8DRW8|MUTS_STRMU DNA mismatch repair protein MutS OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=mutS PE=3 SV=1
Length = 849
Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 340/680 (50%), Gaps = 54/680 (7%)
Query: 203 SECKTLRDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
SE L+ G L+E + F K +L+ ++ V V + D + E+A A
Sbjct: 163 SEVLNLKTRELVIGFELSENEDQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AA 220
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
G LL Y + Y + Y+++ A +L++LE+ K+ SL+ L++
Sbjct: 221 GKLLQYVHNTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLD 280
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
T TA MG RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL
Sbjct: 281 ETKTA-MGTRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLA 339
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLN 440
+ +A + +++L Q+ ++P I++ L+ + LESL + D L
Sbjct: 340 SRVSFGKANPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLP 388
Query: 441 KFIALVETSVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTAS 493
+ AL+ +++D + E G MI +D L + E S I + +Q +
Sbjct: 389 ELEALIRSAIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSG 446
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
LK+D + G+ F +T + F T K+ +F +L K+
Sbjct: 447 I------STLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKI 496
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+ + EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y
Sbjct: 497 EGEMLEAREESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHY 554
Query: 614 TRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
RP N +I +E RH VE +IPN + K+ Q+ITGPNM GKST+
Sbjct: 555 VRPSFNHQQ--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTY 611
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQ+ + ++MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K
Sbjct: 612 MRQLALTVIMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKA 671
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SLI+ DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L
Sbjct: 672 ATPNSLILFDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL-------- 723
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ ++ + N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A
Sbjct: 724 -STRLTSLVNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHI 780
Query: 853 AAELEDFTPSAVISDDAKIE 872
+LE SA +S + K E
Sbjct: 781 LVDLEKM--SAAVSVNLKNE 798
>sp|B1KSA3|MUTS_CLOBM DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=mutS PE=3 SV=1
Length = 932
Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 329/613 (53%), Gaps = 67/613 (10%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL++
Sbjct: 255 YSIVDYLTIDVNSRRNLEITENLREKIKKGSLLWVLDKTNTA-MGGRQLRRWIEQPLINK 313
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S ++
Sbjct: 314 TPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSIGKV 373
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLENGEY 460
PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 374 PYIKKYLSSFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI---------- 422
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 423 -IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITKA 478
Query: 521 ------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
E IRK+ + ++I E ++ K + +KL D K+ E ++ +E
Sbjct: 479 NLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFIEEN 537
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
++R+ +TA ++S++D L S A +A Y +P+IN D +I++E
Sbjct: 538 IDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIEEG 582
Query: 632 RHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP
Sbjct: 583 RHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVP 642
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTST
Sbjct: 643 AKEANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTST 702
Query: 751 YDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
YDG +AW++ E++ + +R TLFATH+HELT L E N K GV NY VS
Sbjct: 703 YDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKL------EDNIK---GVKNYSVS-- 751
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFT 860
+ ++ L K+ G DQS+GI VA+ A P V+ A+E +E + T
Sbjct: 752 VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNIT 811
Query: 861 PSAVISDDAKIEV 873
PS IEV
Sbjct: 812 PSKEYKSKDYIEV 824
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 317,285,751
Number of Sequences: 539616
Number of extensions: 13402670
Number of successful extensions: 42560
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 39013
Number of HSP's gapped (non-prelim): 1313
length of query: 888
length of database: 191,569,459
effective HSP length: 127
effective length of query: 761
effective length of database: 123,038,227
effective search space: 93632090747
effective search space used: 93632090747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)