BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002724
(888 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BIH|A Chain A, Crystal Structure Of The Molybdenum-containing Nitrate
Reducing Fragment Of Pichia Angusta Assimilatory Nitrate
Reductase
Length = 474
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 276/443 (62%), Gaps = 36/443 (8%)
Query: 82 PRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVP---K 138
P D T DN++ R+P ++RLTG HPFN E PLT+L GF+TPV LH+VRNHGPVP
Sbjct: 30 PTDLKTKDNFVARDPDLLRLTGSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPD 89
Query: 139 ASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWG 198
+ +DW + + G+V+ P + + +M +F PVT+VCAGNRRKEQNMVK+ GFNWG
Sbjct: 90 ENILDWEVSIEGMVETPYKIKLSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWG 149
Query: 199 AAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMD 258
AAG STS+W G L V+ + R A V EGA++ P G YGT IR MD
Sbjct: 150 AAGTSTSLWTGCMLGDVIGKARPSKR---ARFVWMEGADN-PANGA--YGTCIRLSWCMD 203
Query: 259 PARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNR 318
P R I++AY QNGE L PDHG P+RV+IPG IGGR VKWLK+++V+ + S+N+YHY DNR
Sbjct: 204 PERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNR 263
Query: 319 VLPSHVDAELANAEAWWYKPE-YIINELNINSVITTPCHEEILPINSWTAQRPYTLRGYA 377
VLP+ V E+A ++ W+K E Y I +LN+ ++I P +++++ I ++ Y + G+
Sbjct: 264 VLPTMVTPEMAKSDDRWWKDERYAIYDLNLQTIICKPENQQVIKI----SEDEYEIAGFG 319
Query: 378 YSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYW----------------CWCFW 421
Y+GGG ++ R+EV+LD G +W + +D+PE + Y+ CWCFW
Sbjct: 320 YNGGGVRIGRIEVSLDKGKSWKLADIDYPEDRYREAGYFRLFGGLVNVCDRMSCLCWCFW 379
Query: 422 SLELEVLDLLGAKDIAVRAWDETLNTQPEKLIWNVMGMMNNCWFRVKANVCKAHKGEIGI 481
L++ + +L +KDI +R DE + QP + WNV M+NN W+RV +GE +
Sbjct: 380 KLKVPLSELARSKDILIRGMDERMMVQPRTMYWNVTSMLNNWWYRVAI----IREGE-SL 434
Query: 482 VFEHPTQPGNQSGGWMAKERHLG 504
FEHP N+ GGWM + + G
Sbjct: 435 RFEHPVV-ANKPGGWMDRVKAEG 456
>pdb|2BII|A Chain A, Crystal Structure Of Nitrate-Reducing Fragment Of
Assimilatory Nitrate Reductase From Pichia Angusta
pdb|2BII|B Chain B, Crystal Structure Of Nitrate-Reducing Fragment Of
Assimilatory Nitrate Reductase From Pichia Angusta
Length = 424
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/422 (43%), Positives = 260/422 (61%), Gaps = 36/422 (8%)
Query: 103 GKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVP---KASWVDWTIEVTGLVKRPARFT 159
G HPFN E PLT+L GF+TPV LH+VRNHGPVP + +DW + + G+V+ P +
Sbjct: 1 GSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIK 60
Query: 160 MDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPLRHVLKRC 219
+ +M +F PVT+VCAGNRRKEQNMVK+ GFNWGAAG STS+W G L V+ +
Sbjct: 61 LSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKA 120
Query: 220 GIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARDIILAYMQNGELLSPDHG 279
R A V EGA++ G YGT IR MDP R I++AY QNGE L PDHG
Sbjct: 121 RPSKR---ARFVWMEGADNPANGA---YGTCIRLSWCMDPERCIMIAYQQNGEWLHPDHG 174
Query: 280 FPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAEAWWYKPE 339
P+RV+IPG IGGR VKWLK+++V+ + S+N+YHY DNRVLP+ V E+A ++ W+K E
Sbjct: 175 KPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPTMVTPEMAKSDDRWWKDE 234
Query: 340 -YIINELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVTLDGGDTW 398
Y I +LN+ ++I P +++++ I ++ Y + G+ Y+GGG ++ R+EV+LD G +W
Sbjct: 235 RYAIYDLNLQTIICKPENQQVIKI----SEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSW 290
Query: 399 HVCTLDHPEQPNKYGKYW----------------CWCFWSLELEVLDLLGAKDIAVRAWD 442
+ +D+PE + Y+ CWCFW L++ + +L +KDI +R D
Sbjct: 291 KLADIDYPEDRYREAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMD 350
Query: 443 ETLNTQPEKLIWNVMGMMNNCWFRVKANVCKAHKGEIGIVFEHPTQPGNQSGGWMAKERH 502
E + QP + WNV M+NN W+RV +GE + FEHP N+ GGWM + +
Sbjct: 351 ERMMVQPRTMYWNVTSMLNNWWYRVAI----IREGE-SLRFEHPVV-ANKPGGWMDRVKA 404
Query: 503 LG 504
G
Sbjct: 405 EG 406
>pdb|1CNF|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
pdb|2CND|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 343 bits (880), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 204/262 (77%), Gaps = 18/262 (6%)
Query: 645 PREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLP--------------LCMRAYTPTS 690
PR +I C+LV K +S DVRLFRF+LP DQVLGLP LCMRAYTPTS
Sbjct: 9 PRGRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTS 68
Query: 691 SVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFL 750
VDE+GHFDL+VK+YFK HPKFPNGGLM+QYLDSL VGS +DVKGPLGH++YTGRG+F+
Sbjct: 69 MVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFV 128
Query: 751 VHGKPKFAKKLAMLAGGTGITPIYQIMQAILKD-PEDETEMYVVYANRTXXXXXXXXXXX 809
++GK + A++LAM+ GG+GITP+YQI+QA+L+D PED TEM++VYANRT
Sbjct: 129 INGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELD 188
Query: 810 XWAKKH-DRVKVWYVVE--KSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMI 866
WA ++ DR+KVWYV++ K +EGW+YS GF+TEA+LREHVPEG DTLALACGPPPMI
Sbjct: 189 RWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPMI 248
Query: 867 QFAVQPNLEKMNYDTKDSLLVF 888
QFA+ PNLEKM YD +S +VF
Sbjct: 249 QFAISPNLEKMKYDMANSFVVF 270
>pdb|1CNE|A Chain A, Structural Studies On Corn Nitrate Reductase: Refined
Structure Of The Cytochrome B Reductase Fragment At 2.5
Angstroms, Its Adp Complex And An Active Site Mutant And
Modeling Of The Cytochrome B Domain
Length = 270
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/262 (62%), Positives = 203/262 (77%), Gaps = 18/262 (6%)
Query: 645 PREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLP--------------LCMRAYTPTS 690
PR +I C+LV K +S DVRLFRF+LP DQVLGLP LCMRAYTPTS
Sbjct: 9 PRGRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTS 68
Query: 691 SVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFL 750
VDE+GHFDL+VK+YFK HPKFPNGGLM+QYLDSL VGS +DVKGPLGH++YTGRG+F+
Sbjct: 69 MVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFV 128
Query: 751 VHGKPKFAKKLAMLAGGTGITPIYQIMQAILKD-PEDETEMYVVYANRTXXXXXXXXXXX 809
++GK + A++LAM+ GG+GITP+YQI+QA+L+D PED TEM++VYANRT
Sbjct: 129 INGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELD 188
Query: 810 XWAKKH-DRVKVWYVVE--KSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPPMI 866
WA ++ DR+KVWYV++ K +EGW+YS GF+TEA+LREHVPEG DTLALA GPPPMI
Sbjct: 189 RWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALASGPPPMI 248
Query: 867 QFAVQPNLEKMNYDTKDSLLVF 888
QFA+ PNLEKM YD +S +VF
Sbjct: 249 QFAISPNLEKMKYDMANSFVVF 270
>pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 77 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPV 136
P+ D +D D R+P + R+ + PFN E P L+ F+TP L + RNH PV
Sbjct: 88 PAAPDAQDPFAGDP--PRHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPV 143
Query: 137 PKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFN 196
P + + V G ++ +L FP E TL CAGNRR E + V+ G
Sbjct: 144 PAVEPSSYRLRVDGPGGGTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLP 203
Query: 197 WGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVG 256
W +ST+ W G LR VL G G +VCFEG + P GG+ YG SI
Sbjct: 204 WDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRA 261
Query: 257 MDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKD 316
+ PA D++LAY NG L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D
Sbjct: 262 LSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQND 321
Query: 317 NRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGY 376
N+ VD + + Y+ I EL + S +T P +P T++GY
Sbjct: 322 NKGFSPCVDWDTVD-----YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGY 370
Query: 377 AYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDI 436
A+SGGG++V RV+V+LDGG TW V L + P G+ W W W L + V + +I
Sbjct: 371 AWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEI 427
Query: 437 AVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKANV 471
+A D + N QP+ + IWN+MGM++ W RV+ +V
Sbjct: 428 VCKAVDSSYNVQPDSVAPIWNLMGMLSTAWHRVRVSV 464
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 529 YSLSEVAKHNSADSAWIIVHG-HIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDK 587
Y+ EV +H S + + HG ++D T F++ HPGG D IL+ AG E F A+++
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVH 65
Query: 588 AK----KMLEDYRIGEL 600
+ ++L+ Y++GEL
Sbjct: 66 GEPHVLELLQQYKVGEL 82
>pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 77 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPV 136
P+ D +D D R+P + R+ + PFN E P L+ F+TP L + RNH PV
Sbjct: 88 PAAPDAQDPFAGDP--PRHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPV 143
Query: 137 PKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFN 196
P + + V G ++ +L FP E TL CAGNRR E + V+ G
Sbjct: 144 PAVEPSSYRLRVDGPGGGTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLP 203
Query: 197 WGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVG 256
W +ST+ W G LR VL G G +VCFEG + P GG+ YG SI
Sbjct: 204 WDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRA 261
Query: 257 MDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKD 316
+ PA D++LAY NG L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D
Sbjct: 262 LSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQND 321
Query: 317 NRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGY 376
N+ VD + + Y+ I EL + S +T P +P T++GY
Sbjct: 322 NKGFSPCVDWDTVD-----YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGY 370
Query: 377 AYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDI 436
A+SGGG++V RV+V+LDGG TW V L + P G+ W W W L + V + +I
Sbjct: 371 AWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEI 427
Query: 437 AVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKANV 471
+A D + N QP+ + IWN+MG+++ W RV+ +V
Sbjct: 428 VCKAVDSSYNVQPDSVAPIWNLMGVLSTAWHRVRVSV 464
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 529 YSLSEVAKHNSADSAWIIVHG-HIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDK 587
Y+ EV +H S + + HG ++D T F++ HPGG D IL+ AG E F A+++
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVH 65
Query: 588 AK----KMLEDYRIGEL 600
+ ++L+ Y++GEL
Sbjct: 66 GEPHVLELLQQYKVGEL 82
>pdb|2A9D|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With Arg At Residue 161
pdb|2A9D|B Chain B, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With Arg At Residue 161
Length = 372
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 201/380 (52%), Gaps = 20/380 (5%)
Query: 94 RNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVK 153
R+P + R+ + PFN E P L+ F+TP L + RNH PVP + + V G
Sbjct: 9 RHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPVPAVEPSSYRLRVDGPGG 66
Query: 154 RPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPLR 213
R ++ +L FP E TL CAGNRR E + V+ G W +ST+ W G LR
Sbjct: 67 RTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLR 126
Query: 214 HVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARDIILAYMQNGEL 273
VL G G +VCFEG + P GG+ YG SI + PA D++LAY NG
Sbjct: 127 DVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRALSPAADVLLAYEMNGTE 184
Query: 274 LSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAEA 333
L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D + VD + +
Sbjct: 185 LPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSPCVDWDTVD--- 241
Query: 334 WWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVTLD 393
Y+ I EL + S +T P +P T++GYA+SGGG++V RV+V+LD
Sbjct: 242 --YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGYAWSGGGREVVRVDVSLD 293
Query: 394 GGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEKL- 452
GG TW V L + P G+ W W W L + V + +I +A D + N QP+ +
Sbjct: 294 GGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEIVCKAVDSSYNVQPDSVA 350
Query: 453 -IWNVMGMMNNCWFRVKANV 471
IWN+ G+++ W RV+ +V
Sbjct: 351 PIWNLRGVLSTAWHRVRVSV 370
>pdb|1IB0|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad And Nad
pdb|1I7P|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad
Length = 274
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 157/256 (61%), Gaps = 22/256 (8%)
Query: 645 PREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLP--------------LCMRAYTPTS 690
P K P +L++K ++SHD R FRFALP +LGLP L +R YTP S
Sbjct: 12 PDIKYPLRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTPVS 71
Query: 691 SVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFL 750
S D+ G DLVVK+YFK HPKFP GG MSQYL+++++G ++ +GP G + Y G+G F
Sbjct: 72 SDDDKGFVDLVVKVYFKETHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFA 131
Query: 751 VHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXX 804
+ K K + M+AGGTGITP+ Q+++A+LKDP D T Y+++AN++
Sbjct: 132 IRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILL 191
Query: 805 XXXXXXWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPP 863
+H R K+WY V+K+ + W YS GF+ E ++R+H+P +TL L CGPP
Sbjct: 192 RPELEELRNEHSSRFKLWYTVDKA-PDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPP 250
Query: 864 PMIQFAVQPNLEKMNY 879
PMIQFA PNLE++ +
Sbjct: 251 PMIQFACLPNLERVGH 266
>pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver
pdb|1SOX|B Chain B, Sulfite Oxidase From Chicken Liver
Length = 466
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 206/397 (51%), Gaps = 22/397 (5%)
Query: 77 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPV 136
P+ D +D D R+P + R+ + PFN E P L+ F+TP L + RNH PV
Sbjct: 88 PAAPDAQDPFAGDP--PRHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPV 143
Query: 137 PKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFN 196
P + + V G ++ +L FP E TL CAGNRR E + V+ G
Sbjct: 144 PAVEPSSYRLRVDGPGGGTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLP 203
Query: 197 WGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVG 256
W +ST+ W G LR VL G G +VCFEG + P GG+ YG SI
Sbjct: 204 WDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRA 261
Query: 257 MDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKD 316
+ PA D++LAY NG L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D
Sbjct: 262 LSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQND 321
Query: 317 NRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGY 376
+ VD + + Y+ I EL + S +T P +P T++GY
Sbjct: 322 YKGFSPCVDWDTVD-----YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGY 370
Query: 377 AYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDI 436
A+SGGG++V RV+V+LDGG TW V L + P G+ W W W L + V + +I
Sbjct: 371 AWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEI 427
Query: 437 AVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKANV 471
+A D + N QP+ + IWN+ G+++ W RV+ +V
Sbjct: 428 VCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 529 YSLSEVAKHNSADSAWIIVHG-HIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDK 587
Y+ EV +H S + + HG ++D T F++ HPGG D IL+ AG E F A+++
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVH 65
Query: 588 AK----KMLEDYRIGEL 600
+ ++L+ Y++GEL
Sbjct: 66 GEPHVLELLQQYKVGEL 82
>pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr
322 Phe
Length = 466
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 206/397 (51%), Gaps = 22/397 (5%)
Query: 77 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPV 136
P+ D +D D R+P + R+ + PFN E P L+ F+TP L + RNH PV
Sbjct: 88 PAAPDAQDPFAGDP--PRHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPV 143
Query: 137 PKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFN 196
P + + V G ++ +L FP E TL CAGNRR E + V+ G
Sbjct: 144 PAVEPSSYRLRVDGPGGGTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLP 203
Query: 197 WGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVG 256
W +ST+ W G LR VL G G +VCFEG + P GG+ YG SI
Sbjct: 204 WDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRA 261
Query: 257 MDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKD 316
+ PA D++LAY NG L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D
Sbjct: 262 LSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQND 321
Query: 317 NRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGY 376
+ VD + + Y+ I EL + S +T P +P T++GY
Sbjct: 322 FKGFSPCVDWDTVD-----YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGY 370
Query: 377 AYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDI 436
A+SGGG++V RV+V+LDGG TW V L + P G+ W W W L + V + +I
Sbjct: 371 AWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEI 427
Query: 437 AVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKANV 471
+A D + N QP+ + IWN+ G+++ W RV+ +V
Sbjct: 428 VCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 529 YSLSEVAKHNSADSAWIIVHG-HIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDK 587
Y+ EV +H S + + HG ++D T F++ HPGG D IL+ AG E F A+++
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVH 65
Query: 588 AK----KMLEDYRIGEL 600
+ ++L+ Y++GEL
Sbjct: 66 GEPHVLELLQQYKVGEL 82
>pdb|2A99|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
At Resting State
pdb|2A9A|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With The Bound Product, Sulfate, At The Active Site
pdb|2A9A|B Chain B, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With The Bound Product, Sulfate, At The Active Site
Length = 372
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 200/380 (52%), Gaps = 20/380 (5%)
Query: 94 RNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVK 153
R+P + R+ + PFN E P L+ F+TP L + RNH PVP + + V G
Sbjct: 9 RHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPVPAVEPSSYRLRVDGPGG 66
Query: 154 RPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPLR 213
++ +L FP E TL CAGNRR E + V+ G W +ST+ W G LR
Sbjct: 67 GTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLR 126
Query: 214 HVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARDIILAYMQNGEL 273
VL G G +VCFEG + P GG+ YG SI + PA D++LAY NG
Sbjct: 127 DVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRALSPAADVLLAYEMNGTE 184
Query: 274 LSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAEA 333
L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D + VD + +
Sbjct: 185 LPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSPCVDWDTVD--- 241
Query: 334 WWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVTLD 393
Y+ I EL + S +T P +P T++GYA+SGGG++V RV+V+LD
Sbjct: 242 --YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGYAWSGGGREVVRVDVSLD 293
Query: 394 GGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEKL- 452
GG TW V L + P G+ W W W L + V + +I +A D + N QP+ +
Sbjct: 294 GGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEIVCKAVDSSYNVQPDSVA 350
Query: 453 -IWNVMGMMNNCWFRVKANV 471
IWN+ G+++ W RV+ +V
Sbjct: 351 PIWNLRGVLSTAWHRVRVSV 370
>pdb|1QX4|A Chain A, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
pdb|1QX4|B Chain B, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
Length = 274
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 156/256 (60%), Gaps = 22/256 (8%)
Query: 645 PREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLP--------------LCMRAYTPTS 690
P K P +L++K ++SHD R FRFALP +LGLP L +R YTP S
Sbjct: 12 PDIKYPLRLIDKEILSHDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRPYTPVS 71
Query: 691 SVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFL 750
S D+ G DLVVK+YFK HPKFP GG M QYL+++++G ++ +GP G + Y G+G F
Sbjct: 72 SDDDKGFVDLVVKVYFKETHPKFPAGGKMPQYLENMNIGDTIEFRGPNGLLVYQGKGKFA 131
Query: 751 VHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXX 804
+ K K + M+AGGTGITP+ Q+++A+LKDP D T Y+++AN++
Sbjct: 132 IRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILL 191
Query: 805 XXXXXXWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPP 863
+H R K+WY V+K+ + W YS GF+ E ++R+H+P +TL L CGPP
Sbjct: 192 RPELEELRNEHSSRFKLWYTVDKA-PDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPP 250
Query: 864 PMIQFAVQPNLEKMNY 879
PMIQFA PNLE++ +
Sbjct: 251 PMIQFACLPNLERVGH 266
>pdb|1NDH|A Chain A, Crystal Structure Of Nadh-Cytochrome B5 Reductase From Pig
Liver At 2.4 Angstroms Resolution
Length = 272
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 158/256 (61%), Gaps = 22/256 (8%)
Query: 645 PREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLP--------------LCMRAYTPTS 690
P K P +L++K +++HD R FRFALP + +LGLP L +R YTP S
Sbjct: 10 PDIKYPLRLIDKEVVNHDTRRFRFALPSPEHILGLPVGQHIYLSARIDGNLVIRPYTPVS 69
Query: 691 SVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFL 750
S D+ G DLV+K+YFK HPKFP GG MSQYL+S+ +G ++ +GP G + Y G+G F
Sbjct: 70 SDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFA 129
Query: 751 VHGKPKFA------KKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXX 804
+ K + K + M+AGGTGITP+ Q+++AI+KDP+D T ++++AN+T
Sbjct: 130 IRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILL 189
Query: 805 XXXXXXWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPP 863
+H R K+WY V+++ E W YS GF+ E ++R+H+P + L L CGPP
Sbjct: 190 RPELEELRNEHSARFKLWYTVDRA-PEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPP 248
Query: 864 PMIQFAVQPNLEKMNY 879
PMIQ+A PNLE++ +
Sbjct: 249 PMIQYACLPNLERVGH 264
>pdb|2A9B|A Chain A, Crystal Structure Of R138q Mutant Of Recombinant Sulfite
Oxidase At Resting State
pdb|2A9C|A Chain A, Crystal Structure Of R138q Mutant Of Recombinant Chicken
Sulfite Oxidase With The Bound Product, Sulfate, At The
Active Site
pdb|2A9C|B Chain B, Crystal Structure Of R138q Mutant Of Recombinant Chicken
Sulfite Oxidase With The Bound Product, Sulfate, At The
Active Site
Length = 372
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 200/380 (52%), Gaps = 20/380 (5%)
Query: 94 RNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVK 153
R+P + R+ + PFN E P L+ F+TP L + +NH PVP + + V G
Sbjct: 9 RHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTQNHLPVPAVEPSSYRLRVDGPGG 66
Query: 154 RPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPLR 213
++ +L FP E TL CAGNRR E + V+ G W +ST+ W G LR
Sbjct: 67 GTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLR 126
Query: 214 HVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARDIILAYMQNGEL 273
VL G G +VCFEG + P GG+ YG SI + PA D++LAY NG
Sbjct: 127 DVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRALSPAADVLLAYEMNGTE 184
Query: 274 LSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAEA 333
L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D + VD + +
Sbjct: 185 LPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSPCVDWDTVD--- 241
Query: 334 WWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVTLD 393
Y+ I EL + S +T P +P T++GYA+SGGG++V RV+V+LD
Sbjct: 242 --YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGYAWSGGGREVVRVDVSLD 293
Query: 394 GGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEKL- 452
GG TW V L + P G+ W W W L + V + +I +A D + N QP+ +
Sbjct: 294 GGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEIVCKAVDSSYNVQPDSVA 350
Query: 453 -IWNVMGMMNNCWFRVKANV 471
IWN+ G+++ W RV+ +V
Sbjct: 351 PIWNLRGVLSTAWHRVRVSV 370
>pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant Cys 185 Ala
Length = 466
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 205/397 (51%), Gaps = 22/397 (5%)
Query: 77 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPV 136
P+ D +D D R+P + R+ + PFN E P L+ F+TP L + RNH PV
Sbjct: 88 PAAPDAQDPFAGDP--PRHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPV 143
Query: 137 PKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFN 196
P + + V G ++ +L FP E TL AGNRR E + V+ G
Sbjct: 144 PAVEPSSYRLRVDGPGGGTLSLSLAELRSRFPKHEVTATLQAAGNRRSEMSRVRPVKGLP 203
Query: 197 WGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVG 256
W +ST+ W G LR VL G G +VCFEG + P GG+ YG SI
Sbjct: 204 WDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRA 261
Query: 257 MDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKD 316
+ PA D++LAY NG L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D
Sbjct: 262 LSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQND 321
Query: 317 NRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGY 376
+ VD + + Y+ I EL + S +T P +P T++GY
Sbjct: 322 YKGFSPCVDWDTVD-----YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGY 370
Query: 377 AYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDI 436
A+SGGG++V RV+V+LDGG TW V L + P G+ W W W L + V + +I
Sbjct: 371 AWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEI 427
Query: 437 AVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKANV 471
+A D + N QP+ + IWN+ G+++ W RV+ +V
Sbjct: 428 VCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 529 YSLSEVAKHNSADSAWIIVHG-HIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDK 587
Y+ EV +H S + + HG ++D T F++ HPGG D IL+ AG E F A+++
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVH 65
Query: 588 AK----KMLEDYRIGEL 600
+ ++L+ Y++GEL
Sbjct: 66 GEPHVLELLQQYKVGEL 82
>pdb|3HBG|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant C185s
pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant
Sulfite Oxidase With Bound Substrate, Sulfite, At The
Active Site
Length = 466
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 205/397 (51%), Gaps = 22/397 (5%)
Query: 77 PSILDPRDEGTADNWIERNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPV 136
P+ D +D D R+P + R+ + PFN E P L+ F+TP L + RNH PV
Sbjct: 88 PAAPDAQDPFAGDP--PRHPGL-RVNSQKPFNAEPP-AELLAERFLTPNELFFTRNHLPV 143
Query: 137 PKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFN 196
P + + V G ++ +L FP E TL AGNRR E + V+ G
Sbjct: 144 PAVEPSSYRLRVDGPGGGTLSLSLAELRSRFPKHEVTATLQSAGNRRSEMSRVRPVKGLP 203
Query: 197 WGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVG 256
W +ST+ W G LR VL G G +VCFEG + P GG+ YG SI
Sbjct: 204 WDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADP--GGAPYGASIPYGRA 261
Query: 257 MDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKD 316
+ PA D++LAY NG L DHGFPVRV++PG +G R VKWL+R+ V+ ES +++ D
Sbjct: 262 LSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQND 321
Query: 317 NRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRPYTLRGY 376
+ VD + + Y+ I EL + S +T P +P T++GY
Sbjct: 322 YKGFSPCVDWDTVD-----YRTAPAIQELPVQSAVTQPRPGAAVPPGE------LTVKGY 370
Query: 377 AYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDI 436
A+SGGG++V RV+V+LDGG TW V L + P G+ W W W L + V + +I
Sbjct: 371 AWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP--GRAWAWALWELTVPV-EAGTELEI 427
Query: 437 AVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKANV 471
+A D + N QP+ + IWN+ G+++ W RV+ +V
Sbjct: 428 VCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 529 YSLSEVAKHNSADSAWIIVHG-HIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDK 587
Y+ EV +H S + + HG ++D T F++ HPGG D IL+ AG E F A+++
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAG-GALEPFWALYAVH 65
Query: 588 AK----KMLEDYRIGEL 600
+ ++L+ Y++GEL
Sbjct: 66 GEPHVLELLQQYKVGEL 82
>pdb|1UMK|A Chain A, The Structure Of Human Erythrocyte Nadh-Cytochrome B5
Reductase
Length = 275
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 156/259 (60%), Gaps = 22/259 (8%)
Query: 645 PREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLP--------------LCMRAYTPTS 690
P K P +L+++ +ISHD R FRFALP +LGLP L +R YTP S
Sbjct: 13 PDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPIS 72
Query: 691 SVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFL 750
S D+ G DLV+K+YFK HPKFP GG MSQYL+S+ +G ++ +GP G + Y G+G F
Sbjct: 73 SDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFA 132
Query: 751 VHGKPK------FAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXX 804
+ K K + M+AGGTGITP+ Q+++AI+KDP+D T ++++AN+T
Sbjct: 133 IRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILL 192
Query: 805 XXXXXXWAKKHD-RVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPP 863
KH R K+WY ++++ E W Y GF+ E ++R+H+P + L L CGPP
Sbjct: 193 RPELEELRNKHSARFKLWYTLDRA-PEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPP 251
Query: 864 PMIQFAVQPNLEKMNYDTK 882
PMIQ+A PNL+ + + T+
Sbjct: 252 PMIQYACLPNLDHVGHPTE 270
>pdb|1OGP|A Chain A, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
pdb|1OGP|B Chain B, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
pdb|1OGP|C Chain C, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
pdb|1OGP|D Chain D, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
pdb|1OGP|E Chain E, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
pdb|1OGP|F Chain F, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
Length = 393
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 192/390 (49%), Gaps = 37/390 (9%)
Query: 94 RNPSMVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNHGPVPKASWV-DWTIEVTGLV 152
R+PS+ ++ K PFN E P + L+ ++TPV L Y RNHGP+P + +++ +TGL+
Sbjct: 16 RHPSL-KVNAKEPFNAEPPRSALVS-SYVTPVDLFYKRNHGPIPIVDHLQSYSVTLTGLI 73
Query: 153 KRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPL 212
+ P + + + P TL CAGNRR + V+ G W + + +VW G L
Sbjct: 74 QNPRKLFIKDI-RSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKL 132
Query: 213 RHVLKRCGI----FSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARDIILAYM 268
VL+ GI S GA +V F + G Y SI +P D++LAY
Sbjct: 133 ADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQATNPEADVLLAYE 192
Query: 269 QNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAEL 328
NGE L+ DHGFP+RV++PG IG R VKWL I V +ES ++ KD ++ P V+ +
Sbjct: 193 MNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDYKMFPPSVNWDN 252
Query: 329 ANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTAQRP--YTLRGYAYSGGGKKVT 386
N + +P+ + P I + +P +++GYA SGGG+ +
Sbjct: 253 INWSS--RRPQ-----------MDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIE 299
Query: 387 RVEVTLDGGDTWHVCTLDHPEQPNKY-------GKYWCWCFWSLELEVLDLLGAKDIAVR 439
RV+++LDGG W ++P K W W + +D+ ++ +
Sbjct: 300 RVDISLDGGKNW--VEASRTQEPGKQYISEHSSSDKWAWVLFE---ATIDVSQTTEVIAK 354
Query: 440 AWDETLNTQPEKL--IWNVMGMMNNCWFRV 467
A D N QPE + +WN+ G++N W RV
Sbjct: 355 AVDSAANVQPENVESVWNLRGVLNTSWHRV 384
>pdb|2EIX|A Chain A, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
pdb|2EIX|B Chain B, The Structure Of Physarum Polycephalum Cytochrome B5
Reductase
Length = 243
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 139/264 (52%), Gaps = 36/264 (13%)
Query: 639 RSVALVPREKIPCKLVEKILISHDVRLFRFALPQEDQVLGLPL--------------CMR 684
R AL P E L EK +I+H+ RLFRF L + V+GLP+ R
Sbjct: 2 REPALNPNEYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYR 61
Query: 685 AYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQYT 744
YTP SS DE G+FDL++K+Y KG MSQY+D L+ G L V+GP G Y
Sbjct: 62 PYTPVSSDDEKGYFDLIIKVYEKG---------QMSQYIDHLNPGDFLQVRGPKGQFDY- 111
Query: 745 GRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETEMYVVYANRTXXXXXX 804
KP K++ M+AGGTGITP+ Q+ +AI+K+P+++T + +++AN
Sbjct: 112 ---------KPNMVKEMGMIAGGTGITPMLQVARAIIKNPKEKTIINLIFANVNEDDILL 162
Query: 805 XXXXXXWAKKHDRVKVWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALACGPPP 864
AKK+ KV+YV+ GW GF++ ++++H S D + CG PP
Sbjct: 163 RTELDDMAKKYSNFKVYYVLNNP-PAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCG-PP 220
Query: 865 MIQFAVQPNLEKMNYDTKDSLLVF 888
M+ A+Q +LE + Y T + +F
Sbjct: 221 MMNKAMQGHLETLGY-TPEQWFIF 243
>pdb|2BLF|A Chain A, Sulfite Dehydrogenase From Starkeya Novella
pdb|2BPB|A Chain A, Sulfite Dehydrogenase From Starkeya Novella
Length = 373
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 98 MVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNH-GPVPKASWVD-WTIEVTGLVKRP 155
++ LT + P E P + + G ITP +VR H +P D + +E+ G V P
Sbjct: 24 LIGLTARPP-QLETPFS-VFDEGLITPNDAFFVRYHLAGIPLEIDPDAFRLEIKGKVGTP 81
Query: 156 ARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAG-VSTSVWRGVPLRH 214
++ L ++FP+ E C+GN R V+ +G A G + + WRGVPL+
Sbjct: 82 LSLSLQDLKNDFPASEVVAVNQCSGNSR---GFVEPRVGGGQLANGAMGNARWRGVPLKA 138
Query: 215 VLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARD--IILAYMQNGE 272
VL++ G+ ++GA V F G + G K + +D A D ++LAY NG
Sbjct: 139 VLEKAGV---QAGAKQVTFGGLD----GPVIPETPDFVKALSIDHATDGEVMLAYSMNGA 191
Query: 273 LLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAE 332
L +G+P+R+++PG G VK L I V +E D ++ R+ D A E
Sbjct: 192 DLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRI----PDNACACTE 247
Query: 333 AWWYKPEYI-INELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVT 391
I IN ++ S IT + + LRG A+ GG +T+V V+
Sbjct: 248 PGKAPTATIPINRFDVRSFITN------VENGASVKAGEVPLRGIAFD-GGYGITQVSVS 300
Query: 392 LDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEK 451
D G +W TLD GKY + W L + G + RA + TQP +
Sbjct: 301 ADAGKSWTNATLDP-----GLGKY-SFRGWKAVLPLTK--GDHVLMCRATNARGETQPMQ 352
Query: 452 LIWNVMGMMNNC 463
WN G M N
Sbjct: 353 ATWNPAGYMRNV 364
>pdb|2C9X|A Chain A, Sulfite Dehydrogenase From Starkeya Novella Y236f Mutant
Length = 373
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 164/372 (44%), Gaps = 37/372 (9%)
Query: 98 MVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNH-GPVPKASWVD-WTIEVTGLVKRP 155
++ LT + P E P + + G ITP +VR H +P D + +E+ G V P
Sbjct: 24 LIGLTARPP-QLETPFS-VFDEGLITPNDAFFVRYHLAGIPLEIDPDAFRLEIKGKVGTP 81
Query: 156 ARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAG-VSTSVWRGVPLRH 214
++ L ++FP+ E C+GN R V+ +G A G + + WRGVPL+
Sbjct: 82 LSLSLQDLKNDFPASEVVAVNQCSGNSR---GFVEPRVGGGQLANGAMGNARWRGVPLKA 138
Query: 215 VLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARD--IILAYMQNGE 272
VL++ G+ ++GA V F G + G K + +D A D ++LAY NG
Sbjct: 139 VLEKAGV---QAGAKQVTFGGLD----GPVIPETPDFVKALSIDHATDGEVMLAYSMNGA 191
Query: 273 LLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAE 332
L +G+P+R+++PG G VK L I V +E D ++ R+ D A E
Sbjct: 192 DLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAFRI----PDNACACTE 247
Query: 333 AWWYKPEYI-INELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVT 391
I IN ++ S IT + + LRG A+ GG +T+V V+
Sbjct: 248 PGKAPTATIPINRFDVRSFITN------VENGASVKAGEVPLRGIAFD-GGYGITQVSVS 300
Query: 392 LDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEK 451
D G +W TLD GKY + W L + G + RA + TQP +
Sbjct: 301 ADAGKSWTNATLDP-----GLGKY-SFRGWKAVLPLTK--GDHVLMCRATNARGETQPMQ 352
Query: 452 LIWNVMGMMNNC 463
WN G M N
Sbjct: 353 ATWNPAGYMRNV 364
>pdb|2CA3|A Chain A, Sulfite Dehydrogenase From Starkeya Novella R55m Mutant
Length = 373
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 163/372 (43%), Gaps = 37/372 (9%)
Query: 98 MVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNH-GPVPKASWVD-WTIEVTGLVKRP 155
++ LT + P E P + + G ITP +V H +P D + +E+ G V P
Sbjct: 24 LIGLTARPP-QLETPFS-VFDEGLITPNDAFFVMYHLAGIPLEIDPDAFRLEIKGKVGTP 81
Query: 156 ARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAG-VSTSVWRGVPLRH 214
++ L ++FP+ E C+GN R V+ +G A G + + WRGVPL+
Sbjct: 82 LSLSLQDLKNDFPASEVVAVNQCSGNSR---GFVEPRVGGGQLANGAMGNARWRGVPLKA 138
Query: 215 VLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARD--IILAYMQNGE 272
VL++ G+ ++GA V F G + G K + +D A D ++LAY NG
Sbjct: 139 VLEKAGV---QAGAKQVTFGGLD----GPVIPETPDFVKALSIDHATDGEVMLAYSMNGA 191
Query: 273 LLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAE 332
L +G+P+R+++PG G VK L I V +E D ++ R+ D A E
Sbjct: 192 DLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRI----PDNACACTE 247
Query: 333 AWWYKPEYI-INELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVT 391
I IN ++ S IT + + LRG A+ GG +T+V V+
Sbjct: 248 PGKAPTATIPINRFDVRSFITN------VENGASVKAGEVPLRGIAFD-GGYGITQVSVS 300
Query: 392 LDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEK 451
D G +W TLD GKY + W L + G + RA + TQP +
Sbjct: 301 ADAGKSWTNATLDP-----GLGKY-SFRGWKAVLPLTK--GDHVLMCRATNARGETQPMQ 352
Query: 452 LIWNVMGMMNNC 463
WN G M N
Sbjct: 353 ATWNPAGYMRNV 364
>pdb|2CA4|A Chain A, Sulfite Dehydrogenase From Starkeya Novella Mutant
Length = 373
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 163/372 (43%), Gaps = 37/372 (9%)
Query: 98 MVRLTGKHPFNCEAPLTRLMQHGFITPVPLHYVRNH-GPVPKASWVD-WTIEVTGLVKRP 155
++ LT + P E P + + G ITP +VR +P D + +E+ G V P
Sbjct: 24 LIGLTARPP-QLETPFS-VFDEGLITPNDAFFVRYALAGIPLEIDPDAFRLEIKGKVGTP 81
Query: 156 ARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAG-VSTSVWRGVPLRH 214
++ L ++FP+ E C+GN R V+ +G A G + + WRGVPL+
Sbjct: 82 LSLSLQDLKNDFPASEVVAVNQCSGNSR---GFVEPRVGGGQLANGAMGNARWRGVPLKA 138
Query: 215 VLKRCGIFSRKSGALNVCFEGAEDLPGGGGSKYGTSIRKEVGMDPARD--IILAYMQNGE 272
VL++ G+ ++GA V F G + G K + +D A D ++LAY NG
Sbjct: 139 VLEKAGV---QAGAKQVTFGGLD----GPVIPETPDFVKALSIDHATDGEVMLAYSMNGA 191
Query: 273 LLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQESDNYYHYKDNRVLPSHVDAELANAE 332
L +G+P+R+++PG G VK L I V +E D ++ R+ D A E
Sbjct: 192 DLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRI----PDNACACTE 247
Query: 333 AWWYKPEYI-INELNINSVITTPCHEEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVT 391
I IN ++ S IT + + LRG A+ GG +T+V V+
Sbjct: 248 PGKAPTATIPINRFDVRSFITN------VENGASVKAGEVPLRGIAFD-GGYGITQVSVS 300
Query: 392 LDGGDTWHVCTLDHPEQPNKYGKYWCWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEK 451
D G +W TLD GKY + W L + G + RA + TQP +
Sbjct: 301 ADAGKSWTNATLDP-----GLGKY-SFRGWKAVLPLTK--GDHVLMCRATNARGETQPMQ 352
Query: 452 LIWNVMGMMNNC 463
WN G M N
Sbjct: 353 ATWNPAGYMRNV 364
>pdb|2XTS|A Chain A, Crystal Structure Of The Sulfane Dehydrogenase Soxcd From
Paracoccus Pantotrophus
pdb|2XTS|C Chain C, Crystal Structure Of The Sulfane Dehydrogenase Soxcd From
Paracoccus Pantotrophus
Length = 390
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 149/348 (42%), Gaps = 45/348 (12%)
Query: 120 GFITPVPLHYVRNHGPVPKASWVDWTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCA 179
G ITP + R+H + S D+ + + GLV++P FT + L+ FP CA
Sbjct: 63 GTITPQGCAFERHHSGAIELSKQDYRLMINGLVEKPLVFTFEDLLR-FPRTTTTAFCECA 121
Query: 180 GNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPLRHVLKRCGIFSRKSGALNVCFEGAEDL 239
N E Q G + + + GVPL +L G+ K + EGA+
Sbjct: 122 ANGGMEWGGA-QLEGCQYTQGMIHNMEYVGVPLSVLLAEAGV---KPEGKWLYAEGAD-- 175
Query: 240 PGGGGSKYGTSIRKEVGMDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLK 299
S G S E MD D++LA+ NGE L +HG+P R+++PG G VKW++
Sbjct: 176 ----ASSNGRSFPMEKVMD---DVMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVR 228
Query: 300 RIIV---TTQESDNYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCH 356
R+ + + + Y D ++P A W + ++ SVIT+P
Sbjct: 229 RLGIYDKAVESREETSKYTD--LMPD------GRARKWTWV-------MDAKSVITSPSP 273
Query: 357 EEILPINSWTAQRPYTLRGYAYSGGGKKVTRVEVTLDGGDTWHVCTLDHPEQPNKYGKYW 416
+ +PI + P + G A+SG G ++TRV+V+LDGG W + P ++
Sbjct: 274 Q--VPIRH--GKGPLVISGLAWSGNG-RITRVDVSLDGGKNWTTARITGQALPKALTRFH 328
Query: 417 CWCFWSLELEVLDLLGAKDIAVRAWDETLNTQPEKLIWNVMGMMNNCW 464
W +L RA DET QP K + NN +
Sbjct: 329 LDIDWDGSEMLLQ--------SRAVDETGYVQPTKDALRAIRGRNNVY 368
>pdb|1B5M|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 84
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAK N+A+ W+++HG +YD TRFL +HPGG + +L AG D TE F+ + HS
Sbjct: 5 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPD 64
Query: 588 AKKMLEDYRIGEL 600
A++ML+ Y IG++
Sbjct: 65 AREMLKQYYIGDV 77
>pdb|1EUE|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1EUE|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 86
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAK N+A+ W+++HG +YD TRFL +HPGG + +L AG D TE F+ I HS
Sbjct: 7 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPD 66
Query: 588 AKKMLEDYRIGEL 600
A++ML+ Y IG++
Sbjct: 67 AREMLKQYYIGDV 79
>pdb|3MUS|A Chain A, 2a Resolution Structure Of Rat Type B Cytochrome B5
pdb|3MUS|B Chain B, 2a Resolution Structure Of Rat Type B Cytochrome B5
Length = 87
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAK N+A+ W+++HG +YD TRFL +HPGG + +L AG D TE F+ + HS
Sbjct: 7 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPD 66
Query: 588 AKKMLEDYRIGEL 600
A++ML+ Y IG++
Sbjct: 67 AREMLKQYYIGDV 79
>pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5
pdb|3NER|B Chain B, Structure Of Human Type B Cytochrome B5
Length = 92
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 522 MNTTSNTYSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFD 581
+ T+ Y L EVAK NS W+++HG +YD TRFL +HPGG + +L AG D +E F+
Sbjct: 5 VETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFE 64
Query: 582 AI-HSDKAKKMLEDYRIGEL 600
+ HS A++ML+ Y IG++
Sbjct: 65 DVGHSSDAREMLKQYYIGDI 84
>pdb|1AWP|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1AWP|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 92
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAK N+A+ W+++HG +YD TRFL +HPGG + +L AG D TE F+ + HS
Sbjct: 12 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPD 71
Query: 588 AKKMLEDYRIGEL 600
A++ML+ Y IG++
Sbjct: 72 AREMLKQYYIGDV 84
>pdb|3OZZ|B Chain B, Structure Of A Cytochrome B5 Core-Swap Mutant
Length = 82
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN+A S W+I+H +YD TRFL +HPGG + +L AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNAKSTWMIIHYKVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPD 64
Query: 588 AKKMLEDYRIGEL 600
A++ML+ + IGEL
Sbjct: 65 AREMLKTFIIGEL 77
>pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|B Chain B, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|C Chain C, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|D Chain D, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
Length = 93
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAKHN+++S W+++HG +YD TRFL +HPGG + + AG D TE F+ + HS
Sbjct: 13 YRLEEVAKHNTSESTWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPD 72
Query: 588 AKKMLEDYRIGEL 600
A++M + Y IG++
Sbjct: 73 AREMSKQYYIGDV 85
>pdb|1ICC|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|C Chain C, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|D Chain D, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 87
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAK N+++ W+++HG +YD TRFL +HPGG + + AG D TE F+ + HS
Sbjct: 7 YRLEEVAKRNTSEETWMVIHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPD 66
Query: 588 AKKMLEDYRIGEL 600
A++ML+ Y IG++
Sbjct: 67 AREMLKQYYIGDV 79
>pdb|2IBJ|A Chain A, Structure Of House Fly Cytochrome B5
Length = 88
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
++ +EVAK+N+ D W I+H ++YD T FL +HPGG + ++ AG D TE F+ + HS
Sbjct: 9 FTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSD 68
Query: 588 AKKMLEDYRIGELI 601
A++M++ Y++GEL+
Sbjct: 69 AREMMKQYKVGELV 82
>pdb|1LJ0|A Chain A, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|B Chain B, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|C Chain C, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|D Chain D, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5
Length = 92
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y L EVAK N+++ W+++HG +YD TRFL +HPGG + + AG D TE F+ + HS
Sbjct: 12 YRLEEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPD 71
Query: 588 AKKMLEDYRIGEL 600
A++M + Y IG++
Sbjct: 72 AREMSKQYYIGDV 84
>pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
Length = 511
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 520 PFMNTTSNTYSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEE 579
P ++ S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T
Sbjct: 2 PKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAI 61
Query: 580 FDAIHS 585
F+ +H+
Sbjct: 62 FEPLHA 67
>pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant
(E48aE56AD60A)
Length = 82
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D T F+A+ HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLRAQAGGDATANFEAVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound
pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound
Length = 511
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 520 PFMNTTSNTYSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEE 579
P ++ S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T
Sbjct: 2 PKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAI 61
Query: 580 FDAIHS 585
F+ +H+
Sbjct: 62 FEPLHA 67
>pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
Length = 511
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 520 PFMNTTSNTYSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEE 579
P ++ S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T
Sbjct: 2 PKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAI 61
Query: 580 FDAIHS 585
F+ +H+
Sbjct: 62 FEPLHA 67
>pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
Length = 511
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 520 PFMNTTSNTYSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEE 579
P ++ S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T
Sbjct: 2 PKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAI 61
Query: 580 FDAIHS 585
F+ +H+
Sbjct: 62 FEPLHA 67
>pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate
pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate
Length = 511
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 520 PFMNTTSNTYSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEE 579
P ++ S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T
Sbjct: 2 PKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAI 61
Query: 580 FDAIHS 585
F+ +H+
Sbjct: 62 FEPLHA 67
>pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human
Cytochrome B5
Length = 108
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 12 YTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71
Query: 588 AKKMLEDYRIGEL 600
A++M + + IGEL
Sbjct: 72 AREMSKTFIIGEL 84
>pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5
Length = 82
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEELREQAGGDATENFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized
Fragment Of Cytochrome B5
pdb|1NX7|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5
Length = 82
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF Cytochrome
B5
Length = 82
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + AG D T F+A+ HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V45h
Length = 82
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEHLREQAGGDATENFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5
Length = 82
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEYLREQAGGDATENFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
pdb|1F04|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
Length = 82
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + AG D T F+A+ HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5
Length = 104
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 11 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 70
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 71 ARELSKTFIIGEL 83
>pdb|3KS0|A Chain A, Crystal Structure Of The Heme Domain Of Flavocytochrome B2
In Complex With Fab B2b4
pdb|3KS0|B Chain B, Crystal Structure Of The Heme Domain Of Flavocytochrome B2
In Complex With Fab B2b4
Length = 95
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 530 SLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDKA- 588
S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T F+ +H+
Sbjct: 7 SPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNVI 66
Query: 589 -KKMLEDYRIGEL 600
K + + ++G L
Sbjct: 67 DKYIAPEKKLGPL 79
>pdb|1CYO|A Chain A, Bovine Cytochrome B(5)
Length = 93
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 7 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 66
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 67 ARELSKTFIIGEL 79
>pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1I8C|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1IET|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, Minimized Average
Structure
pdb|1IEU|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, 10 Structures
Length = 98
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KH + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 11 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 70
Query: 588 AKKMLEDYRIGEL 600
A+++ + Y IGEL
Sbjct: 71 ARELSKTYIIGEL 83
>pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of
Trypsin-Solubilized Fragment Of Cytochrome B5
Length = 82
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEF-DAIHSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F D HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V61h
Length = 82
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEF-DAIHSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE F D HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized Microsomal
Rabbit Cytochrome B5
Length = 104
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 12 YTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 72 ARELSKTFIIGEL 84
>pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
Length = 506
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 530 SLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHS 585
S +EVAKHN D W++++G++YD TRFL +HPGG D I NAG D T F+ +H+
Sbjct: 7 SPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHA 62
>pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat
Microsomal Cytochrome B5, Minimized Average Structure
Length = 99
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KH + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 12 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71
Query: 588 AKKMLEDYRIGEL 600
A+++ + Y IGEL
Sbjct: 72 ARELSKTYIIGEL 84
>pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit
Cytochrome B5. Factors Determining The Heterogeneous
Binding Of The Heme
Length = 94
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 7 YTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 66
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 67 ARELSKTFIIGEL 79
>pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5
Length = 82
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE ++ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENYEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T++L++HPGG + + AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome
B5 In The Presence Of 2 M Guanidinium Chloride:
Monitoring The Early Steps In Protein Unfolding
pdb|1AW3|A Chain A, The Solution Nmr Structure Of Oxidized Rat Microsomal
Cytochrome B5, Minimized Average Structure
pdb|1AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 19 Structures
pdb|1B5A|A Chain A, Rat Ferrocytochrome B5 A Conformation, Nmr, 1 Structure
pdb|1B5B|A Chain A, Rat Ferrocytochrome B5 B Conformation, Nmr, 1 Structure
Length = 94
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KH + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 7 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 66
Query: 588 AKKMLEDYRIGEL 600
A+++ + Y IGEL
Sbjct: 67 ARELSKTYIIGEL 79
>pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome
B5, Nmr, Minimized Average Structure
pdb|1MNY|A Chain A, Dimethyl Propionate Ester Heme-Containing Cytochrome B5
pdb|2AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 21 Structures
Length = 94
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KH + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 7 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 66
Query: 588 AKKMLEDYRIGEL 600
A+++ + Y IGEL
Sbjct: 67 ARELSKTYIIGEL 79
>pdb|1IB7|A Chain A, Solution Structure Of F35y Mutant Of Rat Ferro Cytochrome
B5, A Conformation, Ensemble Of 20 Structures
Length = 94
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KH + S W+I+H +YD T++L++HPGG + + AG D TE F+ + HS
Sbjct: 7 YTLEEIQKHKDSKSTWVILHHKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHSTD 66
Query: 588 AKKMLEDYRIGEL 600
A+++ + Y IGEL
Sbjct: 67 ARELSKTYIIGEL 79
>pdb|1M59|A Chain A, Crystal Structure Of P40v Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++H GG + + AG D TE F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHVGGEEVLREQAGGDATENFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5
Length = 82
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + AG D T F+ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLREQAGGDATANFEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro Cytochrome
B5
Length = 94
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KH + S W+I+H +YD T+FL++HPGG + + AG D TE F+ + HS
Sbjct: 7 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 66
Query: 588 AKKMLEDYRIGEL 600
+++ + Y IGEL
Sbjct: 67 VRELSKTYIIGEL 79
>pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|B Chain B, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|C Chain C, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|D Chain D, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|E Chain E, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|F Chain F, Crystal Structure Of F58w Mutant Of Cytochrome B5
Length = 82
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDK 587
Y+L E+ KHN++ S W+I+H +YD T+FL++HPGG + + AG D TE ++ + HS
Sbjct: 5 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENWEDVGHSTD 64
Query: 588 AKKMLEDYRIGEL 600
A+++ + + IGEL
Sbjct: 65 ARELSKTFIIGEL 77
>pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira
Vacuolata Cytochrome B558, A Prokaryotic Homologue Of
Cytochrome B5
Length = 90
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI----- 583
++L +VA+H+S D W+ +HG +YD T ++ +HPG +L+ G + TE ++
Sbjct: 10 FTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEP 69
Query: 584 HSDKAKKMLEDYRIGEL 600
HS A ++L+ Y IG L
Sbjct: 70 HSSLAARLLQRYLIGTL 86
>pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
pdb|3LF5|B Chain B, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
Length = 88
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 532 SEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHS-DKAKK 590
E+ KHN D WI + G +Y+ + +++ HPGG D ++ AG+D TE FD +H +
Sbjct: 11 EELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYES 70
Query: 591 MLEDYRIGEL 600
ML++ +G +
Sbjct: 71 MLKECLVGRM 80
>pdb|1X3X|A Chain A, Crystal Structure Of Cytochrome B5 From Ascaris Suum
pdb|1X3X|B Chain B, Crystal Structure Of Cytochrome B5 From Ascaris Suum
Length = 82
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 529 YSLSEVAKHNSADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCT 577
Y+ EVAKHN+ + WII G ++D T F K+HPGG IL AG D T
Sbjct: 6 YTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGGK-VILNKAGQDAT 53
>pdb|1XDQ|A Chain A, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase
pdb|1XDQ|B Chain B, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase
pdb|1XDQ|C Chain C, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase
pdb|1XDQ|D Chain D, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase
pdb|1XDQ|E Chain E, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase
pdb|1XDY|A Chain A, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|B Chain B, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|C Chain C, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|D Chain D, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|E Chain E, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|F Chain F, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|G Chain G, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|H Chain H, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|I Chain I, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
pdb|1XDY|J Chain J, Structural And Biochemical Identification Of A Novel
Bacterial Oxidoreductase, W-Containing Cofactor
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 35/174 (20%)
Query: 144 WTIEVTGLVKRPARFTMDQLMHEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVS 203
WT++++G V +P D L FP E + C + +MV IGF
Sbjct: 68 WTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCV----EAWSMVVPWIGF-------- 115
Query: 204 TSVWRGVPLRHVLKRCGIFSRKSGALNVCFE---GAEDLPG------GGGSKYG--TSIR 252
PL +L + S A V FE E +PG GGG KY +R
Sbjct: 116 -------PLHKLL---ALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLR 165
Query: 253 KEVGMDPARDIILAYMQNGELLSPDHGFPVRVIIPGCIGGRMVKWLKRIIVTTQ 306
+ M P ++ G+ L P +G PVR+I+P G + +K + I +T +
Sbjct: 166 LDEAMHPL--TLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRE 217
>pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain Of
Human Sulfite Oxidase
Length = 82
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 525 TSNTYSLSEVAKHNSADSA-WIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI 583
+++ Y+ EV+ H S ++ W+ + ++D T F+ HPGG +++ AG E F A+
Sbjct: 3 STHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPL-EPFWAL 61
Query: 584 HS----DKAKKMLEDYRIGEL 600
++ +++L Y+IGEL
Sbjct: 62 YAVHNQSHVRELLAQYKIGEL 82
>pdb|1TVC|A Chain A, Fad And Nadh Binding Domain Of Methane Monooxygenase
Reductase From Methylococcus Capsulatus (Bath)
Length = 250
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 27/191 (14%)
Query: 684 RAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGGLMSQYLDSLSVGSILDVKGPLGHIQY 743
R+Y+P + + G + ++++ P G + VG +L VKGPLG
Sbjct: 61 RSYSPANLPNPEGRLEFLIRV--------LPEGRFSDYLRNDARVGQVLSVKGPLGVFGL 112
Query: 744 TGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILK-DPEDETEMYVVYANRTXXXX 802
RG P++ +AGGTG+ P+ +++ + + +ET +Y
Sbjct: 113 KERGM-----APRY-----FVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNTEPELFY 162
Query: 803 XXXXXXXXWAKKHDRVK--VWYVVEKSIKEGWQYSTGFITEAILREHVPEGSGDTLALAC 860
+ ++ VK VW+ W+ G +A LRE + + C
Sbjct: 163 IDELKSLERSMRNLTVKACVWHP-----SGDWEGEQGSPIDA-LREDLESSDANPDIYLC 216
Query: 861 GPPPMIQFAVQ 871
GPP MI A +
Sbjct: 217 GPPGMIDAACE 227
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLAGGTGITP+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLAGGTGITPMRTYLWRMFKDAE 175
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 81/207 (39%), Gaps = 30/207 (14%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPEDETE--- 789
+ GP+G L+ P+ + MLAGGTGITP+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLAGGTGITPMRTYLWRMFKDAERAANPEY 182
Query: 790 -----MYVVYANRTXXXXXXXXXXXXWAKKH-DRVKVWYVVEKSIKEGWQYSTGFITEAI 843
++V+ T +K+ D ++ Y + + K Q +I + +
Sbjct: 183 QFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNP-QGGRMYIQDRV 241
Query: 844 LREHVPE-----GSGDTLALACGPPPM 865
EH + + T CGPPPM
Sbjct: 242 A-EHADQLWQLIKNQKTHTYICGPPPM 267
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLAGGTGITP+ + + KD E
Sbjct: 131 KITGPVGK-------EMLLPDDPE--ANVIMLAGGTGITPMRTYLWRMFKDAE 174
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLAGGTGITP+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLAGGTGITPMRTYLWRMFKDAE 175
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 63 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLAGGTGI P+ + + KD E
Sbjct: 123 KITGPVGK-------EMLLPDDPE--ANVIMLAGGTGIAPMRTYLWRMFKDAE 166
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 63 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GPLG L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 123 KITGPLGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 166
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPESLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEQLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 131 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 174
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 131 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 174
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 131 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 174
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 131 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 174
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 131 KITGPVGK-------KMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 174
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 71 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGATVYGVCSTYLTHIEPGSEV 130
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 131 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 174
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPERLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 63 GKPEKLRDYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 123 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 166
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 63 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 123 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 166
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GEPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 72 GKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 132 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 175
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 678 GLPLCMRAYTPTSSVDEVGHFDLVVKIYFKGVHPKFPNGG-----LMSQYLDSLSVGSIL 732
G P +R Y+ S+ D + + + + K P G + S YL + GS +
Sbjct: 63 GKPEELRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 733 DVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQIMQAILKDPE 785
+ GP+G L+ P+ + MLA GTGI P+ + + KD E
Sbjct: 123 KITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTYLWRMFKDAE 166
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 717 GLMSQYLDSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQI 776
G+ S YL + GS + + GP+G L+ P+ + MLA GTGI P+
Sbjct: 107 GVCSTYLTHIEPGSEVKITGPVGK-------EMLLPDDPE--ANVIMLATGTGIAPMRTY 157
Query: 777 MQAILKDPE 785
+ + KD E
Sbjct: 158 LWRMFKDAE 166
>pdb|1QFJ|A Chain A, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|B Chain B, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|C Chain C, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
pdb|1QFJ|D Chain D, Crystal Structure Of Nad(p)h:flavin Oxidoreductase From
Escherichia Coli
Length = 232
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 759 KKLAMLAGGTGITPIYQIM-QAILKDPEDETEMYVVYANRTXXXXXXXXXXXXWAKKHDR 817
+ + ++AGGTG + I+ A+ ++P + +Y + R + KH
Sbjct: 103 RPMILIAGGTGFSYARSILLTALARNPNRDITIY--WGGREEQHLYDLCELEALSLKHPG 160
Query: 818 VKVWYVVEKSIKEGWQYSTGFITEAILREH 847
++V VVE+ + GW+ TG + A+L++H
Sbjct: 161 LQVVPVVEQP-EAGWRGRTGTVLTAVLQDH 189
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 17/152 (11%)
Query: 717 GLMSQYLD-SLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPIYQ 775
G MS+YL G + GP G +L K + + MLAGGTGI P
Sbjct: 179 GKMSEYLSVQAKAGDKMSFTGPFGSF-------YLRDVK----RPVLMLAGGTGIAPFLS 227
Query: 776 IMQAILKDPEDETEMYVVYANRTXXXXXXXXXXXXWAKKHDRVKVWYVVEKSIKEGWQYS 835
++Q +L+ E + +V+ +K + VV + E
Sbjct: 228 MLQ-VLEQKGSEHPVRLVFGVTQDCDLVALEQLDALQQKLPWFEYRTVVAHA--ESQHER 284
Query: 836 TGFITEAILREHVPEGSGDTLALACGPPPMIQ 867
G++T I + + G D CGP PM++
Sbjct: 285 KGYVTGHIEYDWLNGGEVDV--YLCGPVPMVE 314
>pdb|4EH1|A Chain A, Crystal Structure Of The Flavohem-Like-FadNAD BINDING
DOMAIN OF Nitric Oxide Dioxygenase From Vibrio Cholerae
O1 Biovar El Tor
pdb|4EH1|B Chain B, Crystal Structure Of The Flavohem-Like-FadNAD BINDING
DOMAIN OF Nitric Oxide Dioxygenase From Vibrio Cholerae
O1 Biovar El Tor
Length = 243
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 715 NGGLMSQYL-DSLSVGSILDVKGPLGHIQYTGRGNFLVHGKPKFAKKLAMLAGGTGITPI 773
N GL+S YL +++ VG + + P G Y R + + +++ G G TP+
Sbjct: 81 NPGLVSHYLHNNVKVGDSVKLYAPAGDFFYVER-----------ERPVVLISAGVGATPM 129
Query: 774 YQIMQAILKDPEDETEMYVVYA-NRTXXXXXXXXXXXXWAKKHDRVKVWYVVEKS--IKE 830
I+ + K ++++ + +YA N A++ +VWY E + + +
Sbjct: 130 QAILHTLAK--QNKSGVTYLYACNSAKEHTFAQETAQLIAQQGWMQQVWYRDESADDVLQ 187
Query: 831 GWQYSTGFITEAILREHVPEGSGDTLALACGPPPMIQFAVQPNL 874
G + E IL P GD CGP +Q+ V+ L
Sbjct: 188 GEMQ----LAELIL----PIEDGDF--YLCGPIGFMQYVVKQLL 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,146,893
Number of Sequences: 62578
Number of extensions: 1311661
Number of successful extensions: 3066
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2873
Number of HSP's gapped (non-prelim): 109
length of query: 888
length of database: 14,973,337
effective HSP length: 107
effective length of query: 781
effective length of database: 8,277,491
effective search space: 6464720471
effective search space used: 6464720471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)