Query         002727
Match_columns 887
No_of_seqs    569 out of 3618
Neff          7.4 
Searched_HMMs 13730
Date          Tue Mar 26 18:17:15 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002727.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1441-1444//hhsearch_scop/002727hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1koaa2 d.144.1.7 (A:5915-6264 100.0       0       0  412.8  25.8  259  563-886    23-285 (350)
  2 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0       0       0  417.3  20.1  296  563-885     2-302 (322)
  3 d1koba_ d.144.1.7 (A:) Twitchi 100.0       0       0  413.4  23.1  256  567-886    29-288 (352)
  4 d1a06a_ d.144.1.7 (A:) Calmodu 100.0       0       0  414.0  22.5  260  562-886     4-269 (307)
  5 d1yhwa1 d.144.1.7 (A:249-541)  100.0       0       0  408.0  25.3  252  566-885    19-274 (293)
  6 d2j4za1 d.144.1.7 (A:126-388)  100.0       0       0  411.0  23.0  250  567-886     6-260 (263)
  7 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0       0       0  402.6  28.5  292  554-886     2-306 (346)
  8 d1jksa_ d.144.1.7 (A:) Death-a 100.0       0       0  402.6  28.1  259  563-886     6-276 (293)
  9 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0       0       0  404.6  26.0  250  567-886     5-266 (337)
 10 d1tkia_ d.144.1.7 (A:) Titin,  100.0       0       0  405.1  23.2  258  565-886     3-263 (321)
 11 d1nvra_ d.144.1.7 (A:) Cell cy 100.0       0       0  408.4  20.6  254  566-886     4-265 (271)
 12 d2jfla1 d.144.1.7 (A:21-308) S 100.0       0       0  402.4  24.8  254  567-886    12-274 (288)
 13 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0       0       0  401.6  25.3  249  567-886    41-299 (350)
 14 d1omwa3 d.144.1.7 (A:186-549)  100.0       0       0  400.1  26.5  256  567-886     4-270 (364)
 15 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0       0       0  402.3  23.8  250  567-886     8-272 (288)
 16 d1t4ha_ d.144.1.7 (A:) Protein 100.0       0       0  397.6  25.4  256  563-885     4-270 (270)
 17 d1fota_ d.144.1.7 (A:) cAMP-de 100.0       0       0  396.6  25.9  249  567-886     4-262 (316)
 18 d2b1pa1 d.144.1.7 (A:46-400) c 100.0       0       0  396.8  24.9  302  555-886     2-316 (355)
 19 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0       0       0  392.4  27.2  284  566-886     6-298 (305)
 20 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0       0       0  397.6  22.7  251  566-886    14-272 (309)
 21 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0       0       0  390.6  27.0  279  568-886    21-308 (350)
 22 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0       0       0  391.9  26.0  281  567-886     2-288 (298)
 23 d1ua2a_ d.144.1.7 (A:) Cell di 100.0       0       0  394.5  23.7  276  571-887     2-286 (299)
 24 d2java1 d.144.1.7 (A:3-271) Se 100.0       0       0  395.3  21.5  252  567-884     4-269 (269)
 25 d1phka_ d.144.1.7 (A:) gamma-s 100.0       0       0  387.3  27.7  257  565-886     1-275 (277)
 26 d1xjda_ d.144.1.7 (A:) Protein 100.0       0       0  391.0  23.8  250  567-886     2-260 (320)
 27 d2ozaa1 d.144.1.7 (A:51-385) M 100.0       0       0  395.5  18.4  259  566-886    10-277 (335)
 28 d3blha1 d.144.1.7 (A:8-325) Ce 100.0       0       0  379.3  27.8  283  567-886    10-310 (318)
 29 d1pmea_ d.144.1.7 (A:) MAP kin 100.0       0       0  380.4  26.1  278  566-886     7-300 (345)
 30 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0       0       0  388.5  19.5  249  565-886     2-260 (273)
 31 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0       0       0  380.8  23.7  279  567-886     2-286 (286)
 32 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0       0       0  375.7  26.5  311  556-886     1-333 (362)
 33 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0       0       0  377.2  24.4  283  566-886    34-324 (328)
 34 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0       0       0  377.9  22.0  288  555-886     3-306 (348)
 35 d1unla_ d.144.1.7 (A:) Cyclin- 100.0       0       0  368.7  27.6  279  567-886     2-288 (292)
 36 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0       0       0  368.5  22.8  259  563-881    33-320 (325)
 37 d1opja_ d.144.1.7 (A:) Abelson 100.0       0       0  368.6  22.2  251  563-880    13-268 (287)
 38 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0       0       0  365.5  22.7  256  563-884     3-272 (277)
 39 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0       0       0  364.5  21.1  258  567-886    24-297 (322)
 40 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0       0       0  365.2  19.5  253  564-885    10-269 (272)
 41 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0       0       0  360.5  23.0  253  564-881    23-286 (299)
 42 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0       0       0  358.6  22.7  246  567-881     5-255 (263)
 43 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0       0       0  358.7  21.9  252  567-885     8-272 (285)
 44 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0       0       0  359.9  19.4  253  563-882     4-267 (276)
 45 d1xkka_ d.144.1.7 (A:) EGF rec 100.0       0       0  353.8  23.7  251  567-882     9-267 (317)
 46 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0       0       0  356.1  21.2  244  573-884    13-269 (277)
 47 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0       0       0  355.6  21.1  246  567-881     4-254 (258)
 48 d1fmka3 d.144.1.7 (A:249-533)  100.0       0       0  353.8  21.3  252  566-886    16-274 (285)
 49 d1mp8a_ d.144.1.7 (A:) Focal a 100.0       0       0  351.8  21.7  253  563-881     3-262 (273)
 50 d1mqba_ d.144.1.7 (A:) epha2 r 100.0       0       0  346.6  25.5  254  563-880     3-265 (283)
 51 d1ywna1 d.144.1.7 (A:818-1166) 100.0       0       0  348.1  23.5  259  563-881     9-290 (299)
 52 d1ckia_ d.144.1.7 (A:) Casein  100.0       0       0  340.4  24.1  258  565-885     5-279 (299)
 53 d1lufa_ d.144.1.7 (A:) Musk ty 100.0       0       0  344.3  20.9  256  563-880     9-294 (301)
 54 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0       0       0  335.4  26.8  258  563-880    19-300 (311)
 55 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0       0       0  340.9  22.2  256  564-880    10-289 (299)
 56 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0       0       0  342.1  19.4  252  567-881    10-279 (309)
 57 d1csna_ d.144.1.7 (A:) Casein  100.0       0       0  331.7  27.3  255  563-880     1-271 (293)
 58 d1p4oa_ d.144.1.7 (A:) Insulin 100.0       0       0  337.9  22.1  261  563-885    16-298 (308)
 59 d1u46a_ d.144.1.7 (A:) Activat 100.0       0       0  340.4  20.1  250  566-880     7-267 (273)
 60 d1byga_ d.144.1.7 (A:) Carboxy 100.0       0       0  339.6  18.4  247  564-881     4-253 (262)
 61 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0       0       0  327.4  22.3  248  569-881    29-287 (311)
 62 d1vjya_ d.144.1.7 (A:) Type I  100.0       0       0  324.2  22.1  264  566-881     2-291 (303)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 1.3E-24 9.4E-29  172.2   7.1  169  569-764     2-189 (191)
 64 d1j7la_ d.144.1.6 (A:) Type II  98.6 2.7E-07   2E-11   60.9  11.5  147  567-725    14-213 (263)
 65 d2pula1 d.144.1.6 (A:5-396) Me  98.4 8.1E-06 5.9E-10   51.4  13.1   77  572-657    31-115 (392)
 66 d1nd4a_ d.144.1.6 (A:) Aminogl  98.1   2E-05 1.5E-09   48.9  10.0  140  574-725    17-205 (255)
 67 d1zyla1 d.144.1.6 (A:4-328) Rd  98.0  0.0001 7.6E-09   44.3  12.8  140  578-726    33-221 (325)
 68 d2ppqa1 d.144.1.6 (A:5-320) Ho  97.9 0.00015 1.1E-08   43.2  12.5  149  568-725    19-213 (316)
 69 d1nw1a_ d.144.1.8 (A:) Choline  97.7 0.00018 1.3E-08   42.7   9.9   77  571-657    46-125 (395)
 70 d2npta1 d.15.2.2 (A:4-108) Mit  86.1   0.014   1E-06   30.5  -3.4   41  402-442    59-99  (105)

No 1  
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=0  Score=412.83  Aligned_cols=259  Identities=25%  Similarity=0.416  Sum_probs=225.4

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCE
Q ss_conf             2434858899885137851899999767899998179999960560-203777999999999609999999525686401
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE-TMNKAGQTEVQILKKLAGADPENKRHCIRFASS  641 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~  641 (887)
                      .++ ++|.+++.||.|+||+||+|.+..++    ..||||++.... .....+..|+.+|..|      .||||++++++
T Consensus        23 ~il-~~Y~i~~~lG~G~fg~Vy~~~~~~~g----~~vAvK~i~~~~~~~~~~~~~E~~il~~l------~HpnIv~~~~~   91 (350)
T d1koaa2          23 HVL-DHYDIHEELGTGAFGVVHRVTERATG----NNFAAKFVMTPHESDKETVRKEIQTMSVL------RHPTLVNLHDA   91 (350)
T ss_dssp             CGG-GTEEEEEEEEEETTEEEEEEEETTTT----EEEEEEEECCCSHHHHHHHHHHHHHHHHT------CCTTBCCEEEE
T ss_pred             CCC-CCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECCCCHHHHHHHHHHHHHHHHC------CCCCCCCEEEE
T ss_conf             786-57589889840768199999988999----89999998452431699999999999867------99799929999


Q ss_pred             EEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC-CCCEEEEEE
Q ss_conf             11268389997621-1239999998166789999999999999999997421156231578899731258-999099982
Q 002727          642 FKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNE-AKNVLKLCD  719 (887)
Q Consensus       642 ~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~-~~~~iKL~D  719 (887)
                      |...+.+||||||| +|+|.++|....  ..|++..++.|+.||+.||.|||++||||+||||+||||+. .++.+||+|
T Consensus        92 ~~~~~~~~ivmE~~~gg~L~~~l~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~D  169 (350)
T d1koaa2          92 FEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLID  169 (350)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHTCTT--SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECC
T ss_pred             EEECCEEEEEEECCCCCCHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEEEEEE
T ss_conf             998999999998579988999997623--789999999999999999999975697600015467364168898699954


Q ss_pred             CCCCEECCCC-CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             2742005889-866765577655524460899994356999999999999099999999918999999985099976653
Q 002727          720 FGNAMFAGKN-EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKML  798 (887)
Q Consensus       720 FG~a~~~~~~-~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l  798 (887)
                      ||+|...... .....+||+.|+|||++.+..|+.++||||||||||+|++|..||.+.+..+++..|......++... 
T Consensus       170 FG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-  248 (350)
T d1koaa2         170 FGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA-  248 (350)
T ss_dssp             CTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGG-
T ss_pred             CCHHEECCCCCCCCEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC-
T ss_conf             5210442565432000686242188997589987267655465999999859899899799999999984788989422-


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             01666663443333556676782469999999861598874542248999995658999999998031398999699989
Q 002727          799 RKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQA  878 (887)
Q Consensus       799 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~ei  878 (887)
                                                                         .+.++..+.+||.+||+.||.+|||+.||
T Consensus       249 ---------------------------------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~ei  277 (350)
T d1koaa2         249 ---------------------------------------------------FSGISEDGKDFIRKLLLADPNTRMTIHQA  277 (350)
T ss_dssp             ---------------------------------------------------GGGCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             ---------------------------------------------------CCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             ---------------------------------------------------35899999999999756896679089998


Q ss_pred             HHCCCCCC
Q ss_conf             84798779
Q 002727          879 LTHPFISG  886 (887)
Q Consensus       879 L~HPwl~~  886 (887)
                      |+||||+.
T Consensus       278 l~hp~~~~  285 (350)
T d1koaa2         278 LEHPWLTP  285 (350)
T ss_dssp             HHSTTTSC
T ss_pred             HCCCCCCC
T ss_conf             62913288


No 2  
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=417.26  Aligned_cols=296  Identities=24%  Similarity=0.395  Sum_probs=224.7

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             243485889988513785189999976789999817999996056--020377799999999960999999952568640
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFAS  640 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~  640 (887)
                      |+.+++|.+++.||+|+||+||+|.+..++    ..||||++...  ......+.+|+.+|..|      +||||+++++
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~----~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~~   71 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSG----LVMARKLIHLEIKPAIRNQIIRELQVLHEC------NSPYIVGFYG   71 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTT----EEEEEEEEECCCCTTHHHHHHHHGGGGGGC------CCTTBCCEEE
T ss_pred             CCCCCCCEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCHHHHHHHHHHHHHHHHC------CCCCCCCEEE
T ss_conf             787568889789712778099999998999----699999987540978999999999999867------9999994999


Q ss_pred             EEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf             111268389997621-12399999981667899999999999999999974211-5623157889973125899909998
Q 002727          641 SFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKN-CGVLHCDIKPDNMLVNEAKNVLKLC  718 (887)
Q Consensus       641 ~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs-~gIiHrDLKP~NILi~~~~~~iKL~  718 (887)
                      +|...+++||||||+ +|+|.+++...+.   +++..++.++.||+.||.|||+ +||||+||||+||||+. ++.+||+
T Consensus        72 ~~~~~~~~~iVmEy~~gg~L~~~l~~~~~---l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~-~~~vkl~  147 (322)
T d1s9ja_          72 AFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLC  147 (322)
T ss_dssp             EEECSSEEEEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT-TCCEEEC
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECC-CCCEEEE
T ss_conf             99989999999976799868998742499---9999999999999999999998599971445779946878-9989995


Q ss_pred             ECCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-HHHHHHHHCCCCHHH
Q ss_conf             2274200588986676557765552446089999435699999999999909999999991899-999998509997665
Q 002727          719 DFGNAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDM-LRLHMELKGPFPKKM  797 (887)
Q Consensus       719 DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~-l~~i~~~~g~~p~~~  797 (887)
                      |||+|........+.++||+.|+|||++.+.+|+.++||||||||||+|++|..||.+.+.... +..+....+......
T Consensus       148 DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  227 (322)
T d1s9ja_         148 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP  227 (322)
T ss_dssp             CCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------
T ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             48776256788621113771411946875899894888998999999999888998998878999999887517754577


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                      ...............    ....+.........+....+..+         ....++.++++||.+||++||.+||||.|
T Consensus       228 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~s~~~~dli~~~L~~dP~~R~ta~e  294 (322)
T d1s9ja_         228 PRPRTPGRPLSSYGM----DSRPPMAIFELLDYIVNEPPPKL---------PSGVFSLEFQDFVNKCLIKNPAERADLKQ  294 (322)
T ss_dssp             ----------------------CCCCHHHHHHHHHTSCCCCC---------CBTTBCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCCCCCCCCCCC----CCCCCHHHHHHHHHHHCCCCCCC---------CCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             421233322111122----23541347788766502687667---------64448999999999986899467908999


Q ss_pred             HHHCCCCC
Q ss_conf             98479877
Q 002727          878 ALTHPFIS  885 (887)
Q Consensus       878 iL~HPwl~  885 (887)
                      ||+||||+
T Consensus       295 ~L~Hpf~~  302 (322)
T d1s9ja_         295 LMVHAFIK  302 (322)
T ss_dssp             HHTSHHHH
T ss_pred             HHHCHHHC
T ss_conf             96098647


No 3  
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=0  Score=413.40  Aligned_cols=256  Identities=25%  Similarity=0.412  Sum_probs=223.7

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEC
Q ss_conf             858899885137851899999767899998179999960560-2037779999999996099999995256864011126
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE-TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYR  645 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~  645 (887)
                      +.|.+++.||.|+||+||+|.+..++    ..||||++.... .....+..|+.+|..|      +||||++++++|...
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~----~~vAiK~i~~~~~~~~~~~~~Ei~il~~l------~HpnIv~~~~~~~~~   98 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATG----RVFVAKFINTPYPLDKYTVKNEISIMNQL------HHPKLINLHDAFEDK   98 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC----CEEEEEEEECCSHHHHHHHHHHHHHHTTC------CSTTBCCEEEEEECS
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECCCCHHHHHHHHHHHHHHHHC------CCCCCCCEEEEEEEC
T ss_conf             03599899931778299999998999----79999998872646799999999999867------997989199999989


Q ss_pred             CEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC-CCCEEEEEECCCC
Q ss_conf             8389997621-1239999998166789999999999999999997421156231578899731258-9990999822742
Q 002727          646 NHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNE-AKNVLKLCDFGNA  723 (887)
Q Consensus       646 ~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~-~~~~iKL~DFG~a  723 (887)
                      +.+||||||| +|+|.+++....  ..|++..++.|+.||+.||.|||++||||+||||+||||+. ..+.+||+|||+|
T Consensus        99 ~~~~ivmE~~~gg~L~~~~~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla  176 (352)
T d1koba_          99 YEMVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA  176 (352)
T ss_dssp             SEEEEEEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred             CEEEEEEECCCCCHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf             99999998289980888898638--9989999999999999999999977926513144553113467884899525630


Q ss_pred             EECCCCC-CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf             0058898-667655776555244608999943569999999999990999999999189999999850999766530166
Q 002727          724 MFAGKNE-ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKGA  802 (887)
Q Consensus       724 ~~~~~~~-~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~~  802 (887)
                      ....... ....++++.|+|||++.+..|+.++||||||||||+|++|.+||.+.+..+.+..|......+|...     
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-----  251 (352)
T d1koba_         177 TKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA-----  251 (352)
T ss_dssp             EECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST-----
T ss_pred             EECCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC-----
T ss_conf             343788720100476453489997479989763338989999999968899899799999999984788989300-----


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
Q ss_conf             66634433335566767824699999998615988745422489999956589999999980313989996999898479
Q 002727          803 FTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTHP  882 (887)
Q Consensus       803 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~HP  882 (887)
                                                                     ++.++..+.+||.+||+.||.+|||+.|||+||
T Consensus       252 -----------------------------------------------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp  284 (352)
T d1koba_         252 -----------------------------------------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP  284 (352)
T ss_dssp             -----------------------------------------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred             -----------------------------------------------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCH
T ss_conf             -----------------------------------------------247999999999997569966891899996097


Q ss_pred             CCCC
Q ss_conf             8779
Q 002727          883 FISG  886 (887)
Q Consensus       883 wl~~  886 (887)
                      ||++
T Consensus       285 ~~~~  288 (352)
T d1koba_         285 WLKG  288 (352)
T ss_dssp             TTSS
T ss_pred             HHCC
T ss_conf             3488


No 4  
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=414.02  Aligned_cols=260  Identities=25%  Similarity=0.417  Sum_probs=224.2

Q ss_pred             CCEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH--HHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             824348588998851378518999997678999981799999605602--037779999999996099999995256864
Q 002727          562 GEILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET--MNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       562 geil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      .+.+.+.|.+++.||.|+||+||+|.+..++    ..||||++.+...  ....+..|+.+|..|      +||||++++
T Consensus         4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~   73 (307)
T d1a06a_           4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQ----KLVAIKCIAKKALEGKEGSMENEIAVLHKI------KHPNIVALD   73 (307)
T ss_dssp             CSCGGGTEEEEEESBSGGGGGEEEEEETTTC----CEEEEEEEEC----------CHHHHHHHTC------CCTTBCCEE
T ss_pred             CCCCCCCEEEEEEEEECCCEEEEEEEECCCC----CEEEEEEECHHHHHHHHHHHHHHHHHHHHC------CCCCCCCEE
T ss_conf             7877666699889940658399999999999----899999981577312899999999999867------998999198


Q ss_pred             CEEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC--CCCEEE
Q ss_conf             0111268389997621-1239999998166789999999999999999997421156231578899731258--999099
Q 002727          640 SSFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNE--AKNVLK  716 (887)
Q Consensus       640 ~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~--~~~~iK  716 (887)
                      ++|...+.+||||||+ +|+|.++|...+   .|++..+..|+.||+.||.|||++||||+||||+|||+..  .++.+|
T Consensus        74 ~~~~~~~~~~lvmE~~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vk  150 (307)
T d1a06a_          74 DIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM  150 (307)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEE
T ss_pred             EEEEECCEEEEEEECCCCCCHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCEEE
T ss_conf             99998998889885268984888653036---788789999999999998752413055687046300110468882499


Q ss_pred             EEECCCCEECCCCC-CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCH
Q ss_conf             98227420058898-66765577655524460899994356999999999999099999999918999999985099976
Q 002727          717 LCDFGNAMFAGKNE-ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPK  795 (887)
Q Consensus       717 L~DFG~a~~~~~~~-~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~  795 (887)
                      |+|||+|....... ....+||+.|+|||++.+..|+.++||||||||||+|++|.+||.+......+..+......++.
T Consensus       151 l~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~  230 (307)
T d1a06a_         151 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS  230 (307)
T ss_dssp             ECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCT
T ss_pred             EECCCEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf             83154358725897044003284225918873799980787345159999998597999998999999998616877787


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf             65301666663443333556676782469999999861598874542248999995658999999998031398999699
Q 002727          796 KMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTV  875 (887)
Q Consensus       796 ~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa  875 (887)
                      .                                                    .++.++..+.+||.+||..||.+|||+
T Consensus       231 ~----------------------------------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~  258 (307)
T d1a06a_         231 P----------------------------------------------------YWDDISDSAKDFIRHLMEKDPEKRFTC  258 (307)
T ss_dssp             T----------------------------------------------------TTTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             C----------------------------------------------------CCCCCCHHHHHHHHHHCCCCHHHCCCH
T ss_conf             6----------------------------------------------------666789999999999760897579189


Q ss_pred             HHHHHCCCCCC
Q ss_conf             98984798779
Q 002727          876 AQALTHPFISG  886 (887)
Q Consensus       876 ~eiL~HPwl~~  886 (887)
                      .|||+||||++
T Consensus       259 ~eil~hp~~~~  269 (307)
T d1a06a_         259 EQALQHPWIAG  269 (307)
T ss_dssp             HHHHHSTTTTS
T ss_pred             HHHHCCHHHCC
T ss_conf             99862984479


No 5  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=408.01  Aligned_cols=252  Identities=25%  Similarity=0.390  Sum_probs=218.8

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             4858899885137851899999767899998179999960560-203777999999999609999999525686401112
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE-TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      .++|.+++.||+|+||+||+|.+..++    ..||||++.... ...+.+..|+.+|+.|      +||||++++++|..
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~----~~vAvK~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~~~~~~~~   88 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATG----QEVAIRQMNLQQQPKKELIINEILVMREN------KNPNIVNYLDSYLV   88 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTC----CEEEEEEEEGGGCSCHHHHHHHHHHHHHC------CCTTBCCEEEEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEEECCCC----CEEEEEEEECCCCHHHHHHHHHHHHHHHC------CCCCEEEEEEEEEE
T ss_conf             105388789812858299999998999----89999998430172799999999999867------99988058577988


Q ss_pred             CCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             68389997621-12399999981667899999999999999999974211562315788997312589990999822742
Q 002727          645 RNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNA  723 (887)
Q Consensus       645 ~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a  723 (887)
                      .+++||||||+ +|+|.+++...    .|++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+|||+|
T Consensus        89 ~~~~~ivmEy~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~-~~~vkl~DFG~a  163 (293)
T d1yhwa1          89 GDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFC  163 (293)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTC
T ss_pred             CCEEEEEEEECCCCCHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC-CCCEEECCCHHH
T ss_conf             99989999703798089886415----9999999999999999999999879722677688868878-996864251564


Q ss_pred             EECCCC--CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             005889--866765577655524460899994356999999999999099999999918999999985099976653016
Q 002727          724 MFAGKN--EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       724 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      ......  .....+||+.|+|||++.+..|+.++|||||||+||+|++|.+||.+.+....+..+.....+.        
T Consensus       164 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~--------  235 (293)
T d1yhwa1         164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE--------  235 (293)
T ss_dssp             EECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC--------
T ss_pred             EEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC--------
T ss_conf             132136664444444777368266447998801203137299999804889989979999999998579998--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             66663443333556676782469999999861598874542248999995658999999998031398999699989847
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                                                                   ...++.++..+.+||.+||..||.+|||+.|||+|
T Consensus       236 ---------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         236 ---------------------------------------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             ---------------------------------------------CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             ---------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf             ---------------------------------------------88855379999999999866996689099999649


Q ss_pred             CCCC
Q ss_conf             9877
Q 002727          882 PFIS  885 (887)
Q Consensus       882 Pwl~  885 (887)
                      |||+
T Consensus       271 p~~~  274 (293)
T d1yhwa1         271 QFLK  274 (293)
T ss_dssp             GGGG
T ss_pred             HHHC
T ss_conf             9657


No 6  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=410.97  Aligned_cols=250  Identities=26%  Similarity=0.416  Sum_probs=221.7

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC----CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             85889988513785189999976789999817999996056----02037779999999996099999995256864011
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN----ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      ++|.+++.||+|+||+||+|.+..++    ..||||++.+.    ......+..|+.+|..|      +||||++++++|
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~~~~~~   75 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSK----FILALKVLFKAQLEKAGVEHQLRREVEIQSHL------RHPNILRLYGYF   75 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTC----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC------CCTTBCCEEEEE
T ss_pred             HHEEEEEEEECCCCCEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCCCEEEEEE
T ss_conf             37699889851778589999998999----49999998168856768999999999999856------888888599999


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      ...+.+||||||+ +|+|.++|.....   +++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+|||
T Consensus        76 ~~~~~~~ivmEy~~~g~L~~~l~~~~~---l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~~kl~DFG  151 (263)
T d2j4za1          76 HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS-AGELKIADFG  151 (263)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCC
T ss_pred             EECCEEEEEEEECCCCCHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECC-CCCEEECCCC
T ss_conf             989998999850479858988750489---999999999999999999999889465220234414668-9987115556


Q ss_pred             CCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             42005889866765577655524460899994356999999999999099999999918999999985099976653016
Q 002727          722 NAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       722 ~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      +|...........+||+.|+|||++.+.+|+.++|||||||+||+|++|.+||.+.+..+.+..+......+|       
T Consensus       152 ~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p-------  224 (263)
T d2j4za1         152 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP-------  224 (263)
T ss_dssp             SCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC-------
T ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC-------
T ss_conf             3354488852355788763499997589989314404675999998329999888999999999971899998-------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             66663443333556676782469999999861598874542248999995658999999998031398999699989847
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                                                                       ..++..+.+||.+||..||.+|||+.|||+|
T Consensus       225 -------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         225 -------------------------------------------------DFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             -------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -------------------------------------------------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf             -------------------------------------------------6689999999999764797689099999719


Q ss_pred             CCCCC
Q ss_conf             98779
Q 002727          882 PFISG  886 (887)
Q Consensus       882 Pwl~~  886 (887)
                      |||++
T Consensus       256 p~~~~  260 (263)
T d2j4za1         256 PWITA  260 (263)
T ss_dssp             HHHHH
T ss_pred             CCCCC
T ss_conf             07078


No 7  
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=402.61  Aligned_cols=292  Identities=32%  Similarity=0.532  Sum_probs=242.3

Q ss_pred             CCCEECCCCCE---ECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC---CHHHHHHHHHHHHHHHHHCC
Q ss_conf             89310122824---3485889988513785189999976789999817999996056---02037779999999996099
Q 002727          554 EGYYSYRFGEI---LDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN---ETMNKAGQTEVQILKKLAGA  627 (887)
Q Consensus       554 ~g~~~~~~gei---l~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~---~~~~~~~~~Ei~iL~~L~~~  627 (887)
                      +|||...++++   +.++|.++++||.|+||+||+|.+..++    +.||||++.+.   ......+.+|+.+|+.|   
T Consensus         2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---   74 (346)
T d1cm8a_           2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTG----AKVAIKKLYRPFQSELFAKRAYRELRLLKHM---   74 (346)
T ss_dssp             CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTC----CEEEEEECSSTTSSHHHHHHHHHHHHHHHHC---
T ss_pred             CCCEEEECCCCEEECCCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCCHHHHHHHHHHHHHHHHC---
T ss_conf             985788536733344771899889801778199999999999----8999999852225969999999999999866---


Q ss_pred             CCCCCCCEEEECCEEEECC------EEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf             9999952568640111268------3899976211239999998166789999999999999999997421156231578
Q 002727          628 DPENKRHCIRFASSFKYRN------HLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDI  701 (887)
Q Consensus       628 ~~~~h~~Iv~l~~~~~~~~------~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDL  701 (887)
                         +||||++++++|...+      ++||||||++.+|..++...    .|++..++.|+.||+.||.|||++||||+||
T Consensus        75 ---~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDi  147 (346)
T d1cm8a_          75 ---RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDL  147 (346)
T ss_dssp             ---CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             ---CCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             ---898754799986357655554159999840552189998740----2269999999999999999987378764566


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf             899731258999099982274200588986676557765552446089-9994356999999999999099999999918
Q 002727          702 KPDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGL-PYDHPLDIWSVGCCLYELYTGKVLFPGATNN  780 (887)
Q Consensus       702 KP~NILi~~~~~~iKL~DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGviL~eLltG~~PF~~~~~~  780 (887)
                      ||+|||++. ++.+||+|||+|..... ..+...+++.|+|||++.+. .++.++||||||||||+|++|.+||.+.+..
T Consensus       148 Kp~NIL~~~-~~~~kl~Dfg~a~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~  225 (346)
T d1cm8a_         148 KPGNLAVNE-DCELKILDFGLARQADS-EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL  225 (346)
T ss_dssp             CGGGEEECT-TCCEEECCCTTCEECCS-SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CCCHHHCCC-CCCCCCCCCCCEECCCC-CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHH
T ss_conf             851111210-01221134310220687-6310245533358899817878996501030038999999786998889768


Q ss_pred             HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99999998509997665301666663443333556676782469999999861598874542248999995658999999
Q 002727          781 DMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDL  860 (887)
Q Consensus       781 ~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dL  860 (887)
                      ..+..+....+.+|..++.......                  .......+.......+..       ..+.++..+++|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~dl  280 (346)
T d1cm8a_         226 DQLKEIMKVTGTPPAEFVQRLQSDE------------------AKNYMKGLPELEKKDFAS-------ILTNASPLAVNL  280 (346)
T ss_dssp             HHHHHHHHHHCCCCHHHHHTCSCHH------------------HHHHHHHSCCCCCCCGGG-------TCTTCCHHHHHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHCCHH------------------HHHHHCCCCCCCCCCHHH-------HCCCCCHHHHHH
T ss_conf             9999998503788488886530003------------------443311578666556677-------556899999999


Q ss_pred             HHHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             99803139899969998984798779
Q 002727          861 LDKIFVLDPEKRMTVAQALTHPFISG  886 (887)
Q Consensus       861 L~kmL~~DP~~RpTa~eiL~HPwl~~  886 (887)
                      |.+||.+||.+||||.|||+||||++
T Consensus       281 i~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         281 LEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             HHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHHHCCCCHHHCCCHHHHHCCHHHCC
T ss_conf             99977299557929999963962375


No 8  
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=402.57  Aligned_cols=259  Identities=26%  Similarity=0.425  Sum_probs=226.4

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-------HHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf             2434858899885137851899999767899998179999960560-------203777999999999609999999525
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE-------TMNKAGQTEVQILKKLAGADPENKRHC  635 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~-------~~~~~~~~Ei~iL~~L~~~~~~~h~~I  635 (887)
                      +.+.++|.+++.||.|+||+||+|.+..++    ..||||++.+..       .....+.+|+.+|..|      +||||
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~----~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l------~HpnI   75 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTG----LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI------QHPNV   75 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTC----CEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC------CCTTB
T ss_pred             CCCCCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHC------CCCCC
T ss_conf             885567798279811789599999999999----89999998756632134068999999999999867------99899


Q ss_pred             EEECCEEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC-
Q ss_conf             68640111268389997621-1239999998166789999999999999999997421156231578899731258999-
Q 002727          636 IRFASSFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKN-  713 (887)
Q Consensus       636 v~l~~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~-  713 (887)
                      ++++++|...+.+||||||| +|+|.++|...+.   +++..++.|+.||+.||.|||+.+|||+||||+|||++..+. 
T Consensus        76 v~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~---l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~  152 (293)
T d1jksa_          76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP  152 (293)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSS
T ss_pred             CCEEEEEEECCEEEEEEECCCCCCCCCHHCCCCC---CCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCC
T ss_conf             9388999979989999986778643100103564---2155789999999999876662542211333012798258986


Q ss_pred             --EEEEEECCCCEECCCC-CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             --0999822742005889-8667655776555244608999943569999999999990999999999189999999850
Q 002727          714 --VLKLCDFGNAMFAGKN-EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELK  790 (887)
Q Consensus       714 --~iKL~DFG~a~~~~~~-~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~  790 (887)
                        .+||+|||+|...... ......+++.|+|||++.+..|+.++||||||||||+|++|..||.+.+..+.+..+....
T Consensus       153 ~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~  232 (293)
T d1jksa_         153 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  232 (293)
T ss_dssp             SCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC
T ss_pred             CCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             66469643344210577763122477774309999818999976652214099999970889988999999999998168


Q ss_pred             CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99976653016666634433335566767824699999998615988745422489999956589999999980313989
Q 002727          791 GPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPE  870 (887)
Q Consensus       791 g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~  870 (887)
                      ..++...+                                                    +.++..+.+||.+||..||.
T Consensus       233 ~~~~~~~~----------------------------------------------------~~~s~~~~~li~~~L~~dP~  260 (293)
T d1jksa_         233 YEFEDEYF----------------------------------------------------SNTSALAKDFIRRLLVKDPK  260 (293)
T ss_dssp             CCCCHHHH----------------------------------------------------TTSCHHHHHHHHTTSCSSGG
T ss_pred             CCCCCHHC----------------------------------------------------CCCCHHHHHHHHHHCCCCHH
T ss_conf             88870104----------------------------------------------------78899999999998638966


Q ss_pred             CCCCHHHHHHCCCCCC
Q ss_conf             9969998984798779
Q 002727          871 KRMTVAQALTHPFISG  886 (887)
Q Consensus       871 ~RpTa~eiL~HPwl~~  886 (887)
                      +|||+.|||+||||++
T Consensus       261 ~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         261 KRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             GSCCHHHHHHSTTTCC
T ss_pred             HCCCHHHHHCCCCCCC
T ss_conf             8919999961904188


No 9  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=404.57  Aligned_cols=250  Identities=23%  Similarity=0.396  Sum_probs=220.4

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             858899885137851899999767899998179999960560----2037779999999996099999995256864011
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE----TMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      ++|.+++.||.|+||.||+|.+..++    ..||||++.+..    .....+..|+.+|..+      +||||++++++|
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~----~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l------~hp~Iv~l~~~~   74 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATG----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNT------RHPFLTALKYAF   74 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTC----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC------CCTTBCCEEEEE
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEEE
T ss_conf             74289889831768499999998999----89999998156544979999999999999867------999887787640


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      ...+.+||||||+ +|+|..++...+.   +++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+|||
T Consensus        75 ~~~~~~~iv~ey~~gg~L~~~~~~~~~---~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~-~g~vkl~DFG  150 (337)
T d1o6la_          75 QTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK-DGHIKITDFG  150 (337)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCT
T ss_pred             CCCCCCCCCEECCCCCCHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC-CCCEEEEECC
T ss_conf             356421110003579860555532567---759999999999965211343159622464777847658-9988882056


Q ss_pred             CCEECCC--CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
Q ss_conf             4200588--98667655776555244608999943569999999999990999999999189999999850999766530
Q 002727          722 NAMFAGK--NEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLR  799 (887)
Q Consensus       722 ~a~~~~~--~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~  799 (887)
                      +|.....  .....++||+.|+|||++.+..|+.++||||||||||+|++|.+||.+.+....+..+......+|     
T Consensus       151 ~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p-----  225 (337)
T d1o6la_         151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-----  225 (337)
T ss_dssp             TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----
T ss_pred             CCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC-----
T ss_conf             520035678620551008899666650489888333102230678899878999999699999999852899898-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-----C
Q ss_conf             16666634433335566767824699999998615988745422489999956589999999980313989996-----9
Q 002727          800 KGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRM-----T  874 (887)
Q Consensus       800 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~Rp-----T  874 (887)
                                                                         ..++..+++||.+||+.||.+|+     +
T Consensus       226 ---------------------------------------------------~~~s~~~~dli~~~L~~dP~~R~~~~~~~  254 (337)
T d1o6la_         226 ---------------------------------------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSD  254 (337)
T ss_dssp             ---------------------------------------------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHCCCCCHHHCCCCCCC
T ss_conf             ---------------------------------------------------66899999999866638934422565234


Q ss_pred             HHHHHHCCCCCC
Q ss_conf             998984798779
Q 002727          875 VAQALTHPFISG  886 (887)
Q Consensus       875 a~eiL~HPwl~~  886 (887)
                      +++||+||||.+
T Consensus       255 ~~eil~Hp~f~~  266 (337)
T d1o6la_         255 AKEVMEHRFFLS  266 (337)
T ss_dssp             HHHHHTSGGGTT
T ss_pred             HHHHHCCCCCCC
T ss_conf             999972915036


No 10 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=405.15  Aligned_cols=258  Identities=23%  Similarity=0.412  Sum_probs=228.3

Q ss_pred             ECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             34858899885137851899999767899998179999960560203777999999999609999999525686401112
Q 002727          565 LDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       565 l~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      +-++|.+++.||+|+||+||+|.+..++    ..||||++.........+..|+.+|..+      +||||++++++|..
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~----~~~AiK~i~~~~~~~~~~~~Ei~il~~l------~HpnIv~~~~~~~~   72 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSK----KTYMAKFVKVKGTDQVLVKKEISILNIA------RHRNILHLHESFES   72 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTT----EEEEEEEECCCTHHHHHHHHHHHHHHHS------CCTTBCCEEEEEEE
T ss_pred             CCCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECCCCCCHHHHHHHHHHHHHC------CCCCCCEEEEEEEE
T ss_conf             7010588789831778399999998999----6999999757866599999999999857------99798909899988


Q ss_pred             CCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC-CCEEEEEECCC
Q ss_conf             68389997621-12399999981667899999999999999999974211562315788997312589-99099982274
Q 002727          645 RNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEA-KNVLKLCDFGN  722 (887)
Q Consensus       645 ~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~-~~~iKL~DFG~  722 (887)
                      .+++||||||| +++|.++|...+  ..|++..++.|+.||+.||.|||++||+|+||||+||||+.. ...+||+|||+
T Consensus        73 ~~~~~lvmE~~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~  150 (321)
T d1tkia_          73 MEELVMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             TTEEEEEECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred             CCEEEEEEECCCCCCHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCH
T ss_conf             998899995389980889987538--999999999999999999999987699751355444344378851899764411


Q ss_pred             CEECCCCC-CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             20058898-66765577655524460899994356999999999999099999999918999999985099976653016
Q 002727          723 AMFAGKNE-ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       723 a~~~~~~~-~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      +....... ....++++.|+|||++.+..|+.++||||||||||+|++|.+||.+.+..+.+..|+.....+|...+   
T Consensus       151 ~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~---  227 (321)
T d1tkia_         151 ARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF---  227 (321)
T ss_dssp             CEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH---
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHC---
T ss_conf             10034677532122332223402104877784011302799999998289999998999999999838999880223---


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             66663443333556676782469999999861598874542248999995658999999998031398999699989847
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                                                                       +.++..+.+||.+||..||.+|||+.|||+|
T Consensus       228 -------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         228 -------------------------------------------------KEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             -------------------------------------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -------------------------------------------------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf             -------------------------------------------------6789999999999866996689099999639


Q ss_pred             CCCCC
Q ss_conf             98779
Q 002727          882 PFISG  886 (887)
Q Consensus       882 Pwl~~  886 (887)
                      |||++
T Consensus       259 p~~~~  263 (321)
T d1tkia_         259 PWLKQ  263 (321)
T ss_dssp             HHHHS
T ss_pred             HHHCC
T ss_conf             96566


No 11 
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=408.39  Aligned_cols=254  Identities=24%  Similarity=0.341  Sum_probs=213.5

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             4858899885137851899999767899998179999960560--20377799999999960999999952568640111
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE--TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      .++|.+++.||+|+||+||+|.+..++    ..||||++....  .....+.+|+.+|..|      +||||++++++|.
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~----~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l------~HpnIv~~~~~~~   73 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTE----EAVAVKIVDMKRAVDCPENIKKEICINKML------NHENVVKFYGHRR   73 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTC----CEEEEEEEECC-------CHHHHHHHHHTC------CCTTBCCEEEEEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEEEHHHCCHHHHHHHHHHHHHHHC------CCCCEEEEEEEEC
T ss_conf             746089989721748099999999999----799999984566412799999999999857------9988846965404


Q ss_pred             ECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             268389997621-1239999998166789999999999999999997421156231578899731258999099982274
Q 002727          644 YRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGN  722 (887)
Q Consensus       644 ~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~  722 (887)
                      ..+.+||||||+ +|+|.++|....   .+++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+|||+
T Consensus        74 ~~~~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~-~~~~KL~DFG~  149 (271)
T d1nvra_          74 EGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE-RDNLKISDFGL  149 (271)
T ss_dssp             ETTEEEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-TCCEEECCCTT
T ss_pred             CCCEEEEEEECCCCCCHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECC-CCCEEECCCHH
T ss_conf             6743679886458980899975379---9999999999999999999999759835754689978878-99879832314


Q ss_pred             CEECCCC----CCCCCCCCCCCCCHHHHCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             2005889----8667655776555244608999-9435699999999999909999999991899999998509997665
Q 002727          723 AMFAGKN----EITPYLVSRFYRAPEIILGLPY-DHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKM  797 (887)
Q Consensus       723 a~~~~~~----~~~~~~gt~~Y~APE~l~~~~~-t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~  797 (887)
                      |......    ..+..+||+.|+|||++.+..| +.++||||||||||+|++|.+||.+.........+......+    
T Consensus       150 a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~----  225 (271)
T d1nvra_         150 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----  225 (271)
T ss_dssp             CEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT----
T ss_pred             HEEECCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC----
T ss_conf             2240468865311132557474287286189999971016173799999982997888898599999998638887----


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                                                                       ...++.++..+.+||.+||+.||.+|||+.|
T Consensus       226 -------------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  256 (271)
T d1nvra_         226 -------------------------------------------------LNPWKKIDSAPLALLHKILVENPSARITIPD  256 (271)
T ss_dssp             -------------------------------------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             -------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             -------------------------------------------------8864469999999999976799668909999


Q ss_pred             HHHCCCCCC
Q ss_conf             984798779
Q 002727          878 ALTHPFISG  886 (887)
Q Consensus       878 iL~HPwl~~  886 (887)
                      ||+||||+.
T Consensus       257 il~hpwf~~  265 (271)
T d1nvra_         257 IKKDRWYNK  265 (271)
T ss_dssp             HTTCTTTTC
T ss_pred             HHCCHHHCC
T ss_conf             961984585


No 12 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=402.44  Aligned_cols=254  Identities=24%  Similarity=0.393  Sum_probs=218.0

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC-CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEC
Q ss_conf             85889988513785189999976789999817999996056-02037779999999996099999995256864011126
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN-ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYR  645 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~-~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~  645 (887)
                      +.|.+++.||.|+||+||+|.+..++    ..||||++... ......+..|+.+|..|      +||||++++++|...
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~~~~~~~   81 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETS----VLAAAKVIDTKSEEELEDYMVEIDILASC------DHPNIVKLLDAFYYE   81 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC----CEEEEEEEECSSSGGGGGTHHHHHHHHHC------CCTTBCCEEEEEEET
T ss_pred             CCEEEEEEEEECCCCEEEEEEECCCC----EEEEEEEECCCCHHHHHHHHHHHHHHHHC------CCCCCCEEEEEEEEC
T ss_conf             37598479930778199999999999----39999998728999999999999999867------999988498898009


Q ss_pred             CEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf             8389997621-123999999816678999999999999999999742115623157889973125899909998227420
Q 002727          646 NHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAM  724 (887)
Q Consensus       646 ~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~  724 (887)
                      +.+||||||+ +|+|.+++....  ..|++..+..|+.||+.||.|||++||||+||||+||||+. ++.+||+|||+|.
T Consensus        82 ~~~~lvmEy~~~g~L~~~~~~~~--~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~-~~~~Kl~DFG~a~  158 (288)
T d2jfla1          82 NNLWILIEFCAGGAVDAVMLELE--RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL-DGDIKLADFGVSA  158 (288)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCE
T ss_pred             CEEEEEEECCCCCCHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECC-CCCEEEEECHHHH
T ss_conf             95899996279981889998628--99999999999999999999999889887140700314878-9998997161230


Q ss_pred             ECCCC--CCCCCCCCCCCCCHHHHC-----CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             05889--866765577655524460-----89999435699999999999909999999991899999998509997665
Q 002727          725 FAGKN--EITPYLVSRFYRAPEIIL-----GLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKM  797 (887)
Q Consensus       725 ~~~~~--~~~~~~gt~~Y~APE~l~-----~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~  797 (887)
                      .....  .....+||+.|+|||++.     +..|+.++|||||||+||+|++|.+||.+.+..+.+..+.....+.    
T Consensus       159 ~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~----  234 (288)
T d2jfla1         159 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT----  234 (288)
T ss_dssp             ECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCC----
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC----
T ss_conf             3577864100102562647999983202578888806657878999999820889999989999999997079987----


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                                                                       ...++.++..+.+||.+||+.||.+|||+.|
T Consensus       235 -------------------------------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e  265 (288)
T d2jfla1         235 -------------------------------------------------LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQ  265 (288)
T ss_dssp             -------------------------------------------------CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             -------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             -------------------------------------------------7765669999999999976699668919999


Q ss_pred             HHHCCCCCC
Q ss_conf             984798779
Q 002727          878 ALTHPFISG  886 (887)
Q Consensus       878 iL~HPwl~~  886 (887)
                      ||+||||+.
T Consensus       266 ll~hp~~~~  274 (288)
T d2jfla1         266 LLQHPFVTV  274 (288)
T ss_dssp             HTTSGGGCC
T ss_pred             HHCCCCCCC
T ss_conf             962923188


No 13 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=401.62  Aligned_cols=249  Identities=25%  Similarity=0.416  Sum_probs=219.2

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             858899885137851899999767899998179999960560----2037779999999996099999995256864011
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE----TMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      ++|.+++.||.|+||+||+|.+..++    ..||||++.+..    .....+..|+.+|..|      +||||++++++|
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g----~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~~~~~~  110 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESG----NHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPFLVKLEFSF  110 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTC----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC------CCTTBCCEEEEE
T ss_pred             CCEEEEEEEECCCCCEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCEEECCCCC
T ss_conf             37089889611768089999998999----89999998267745889999999999999974------877274034444


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      .....+++||||+ +|+|..++...+.   |++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+|||
T Consensus       111 ~~~~~~~~v~e~~~~g~l~~~l~~~~~---l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~-~g~ikL~DFG  186 (350)
T d1rdqe_         111 KDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFG  186 (350)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCT
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCC-CCCEEEEECE
T ss_conf             322222322223346622666751589---899999999999999899998599861767999936077-8978861010


Q ss_pred             CCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             42005889866765577655524460899994356999999999999099999999918999999985099976653016
Q 002727          722 NAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       722 ~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      +|..... .....+||+.|+|||++.+..|+.++||||||||||+|++|.+||.+.+....+..|......+|       
T Consensus       187 ~a~~~~~-~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p-------  258 (350)
T d1rdqe_         187 FAKRVKG-RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP-------  258 (350)
T ss_dssp             TCEECSS-CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-------
T ss_pred             EEEECCC-CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC-------
T ss_conf             3332256-66433676356788997179988533114500789999758899899599999999861798897-------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-----CHH
Q ss_conf             666634433335566767824699999998615988745422489999956589999999980313989996-----999
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRM-----TVA  876 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~Rp-----Ta~  876 (887)
                                                                       ..++..+.+||.+||..||.+|+     |+.
T Consensus       259 -------------------------------------------------~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~  289 (350)
T d1rdqe_         259 -------------------------------------------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVN  289 (350)
T ss_dssp             -------------------------------------------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTH
T ss_pred             -------------------------------------------------CCCCHHHHHHHHHHHHHCHHHCCCCCCCCHH
T ss_conf             -------------------------------------------------6689999999999834099860655345499


Q ss_pred             HHHHCCCCCC
Q ss_conf             8984798779
Q 002727          877 QALTHPFISG  886 (887)
Q Consensus       877 eiL~HPwl~~  886 (887)
                      +||+||||.+
T Consensus       290 ell~Hp~f~~  299 (350)
T d1rdqe_         290 DIKNHKWFAT  299 (350)
T ss_dssp             HHHTSGGGTT
T ss_pred             HHHCCCCCCC
T ss_conf             9971905158


No 14 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=0  Score=400.08  Aligned_cols=256  Identities=21%  Similarity=0.363  Sum_probs=212.5

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH----HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             8588998851378518999997678999981799999605602----037779999999996099999995256864011
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET----MNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      ++|.+++.||.|+||+||+|.+..++    ..||||++.+...    ....+..|..++..+...   +||||++++++|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~----~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~---~hpnIv~l~~~~   76 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTG----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG---DCPFIVCMSYAF   76 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTC----CEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS---CCTTBCCEEEEE
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCC---CCCCEEEEEEEE
T ss_conf             76851018842889099999999999----79999998458754266799999999999998508---998588999999


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      ...+.+||||||+ +|+|.++|.....   +++..++.|+.||+.||.|||++||||+||||+||||+. .+.+||+|||
T Consensus        77 ~~~~~~~ivmE~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~-~g~iKl~DFG  152 (364)
T d1omwa3          77 HTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLG  152 (364)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-SSCEEECCCT
T ss_pred             EECCEEEEEEEECCCCCHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECC-CCCEEEEEEC
T ss_conf             989988999991489838999873255---327899999999999999999779622044422167858-8967982201


Q ss_pred             CCEECCCCCCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf             420058898667655776555244608-9999435699999999999909999999991899999998509997665301
Q 002727          722 NAMFAGKNEITPYLVSRFYRAPEIILG-LPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRK  800 (887)
Q Consensus       722 ~a~~~~~~~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~  800 (887)
                      +|...........+||+.|+|||++.+ ..|+.++||||||||||+|++|..||.+....+....+.....         
T Consensus       153 la~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~---------  223 (364)
T d1omwa3         153 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---------  223 (364)
T ss_dssp             TCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSS---------
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC---------
T ss_conf             02333788643311345542168760389998441046778999999859998888998999999986046---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-----H
Q ss_conf             66666344333355667678246999999986159887454224899999565899999999803139899969-----9
Q 002727          801 GAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMT-----V  875 (887)
Q Consensus       801 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpT-----a  875 (887)
                                                                  .....+..++..+.+||.+||..||.+|||     |
T Consensus       224 --------------------------------------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a  259 (364)
T d1omwa3         224 --------------------------------------------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA  259 (364)
T ss_dssp             --------------------------------------------CCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTH
T ss_pred             --------------------------------------------CCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCH
T ss_conf             --------------------------------------------888788778999999999985669888088743579


Q ss_pred             HHHHHCCCCCC
Q ss_conf             98984798779
Q 002727          876 AQALTHPFISG  886 (887)
Q Consensus       876 ~eiL~HPwl~~  886 (887)
                      ++||+||||.+
T Consensus       260 ~eil~Hp~f~~  270 (364)
T d1omwa3         260 QEVKESPFFRS  270 (364)
T ss_dssp             HHHHTSGGGTT
T ss_pred             HHHHCCCCCCC
T ss_conf             99974910237


No 15 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=402.27  Aligned_cols=250  Identities=26%  Similarity=0.497  Sum_probs=219.0

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             858899885137851899999767899998179999960560----2037779999999996099999995256864011
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE----TMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      ++|.+++.||+|+||+||+|.+..++    ..||||++.+..    .....+..|+.+|..|      +||||++++++|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~~~~   77 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATS----REYAIKILEKRHIIKENKVPYVTRERDVMSRL------DHPFFVKLYFTF   77 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTC----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC------CSTTBCCEEEEE
T ss_pred             CCCEEEEEEEECCCEEEEEEEECCCC----CEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEEE
T ss_conf             87789889850879099999998999----79999998657755777899999999999876------888861799999


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      ...+.+||||||+ +|+|.+++...+.   |++..++.++.||+.||.|||++||||+||||+||||+. ++.+||+|||
T Consensus        78 ~~~~~~~ivmEy~~gg~L~~~~~~~~~---l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~-~~~vkl~DFG  153 (288)
T d1uu3a_          78 QDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE-DMHIQITDFG  153 (288)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCT
T ss_pred             EECCEEEEEEECCCCCCHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC-CCEEEECCCC
T ss_conf             989988999970489877776531599---999999999999999997621650884767741236688-8538860321


Q ss_pred             CCEECCCC----CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             42005889----86676557765552446089999435699999999999909999999991899999998509997665
Q 002727          722 NAMFAGKN----EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKM  797 (887)
Q Consensus       722 ~a~~~~~~----~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~  797 (887)
                      +|......    .....+||+.|+|||++.+..|+.++||||||||||+|++|.+||.+.+...++..|......+|   
T Consensus       154 ~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p---  230 (288)
T d1uu3a_         154 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---  230 (288)
T ss_dssp             TCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC---
T ss_pred             CCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC---
T ss_conf             02422567764333555677552584400268989666230456999998038899899599999999971899998---


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                                                                           ..++..+.+||.+||+.||.+|||+.|
T Consensus       231 -----------------------------------------------------~~~s~~~~~li~~~L~~dP~~R~t~~e  257 (288)
T d1uu3a_         231 -----------------------------------------------------EKFFPKARDLVEKLLVLDATKRLGCEE  257 (288)
T ss_dssp             -----------------------------------------------------TTCCHHHHHHHHTTSCSSGGGSTTSGG
T ss_pred             -----------------------------------------------------CCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             -----------------------------------------------------547999999999985579768919789


Q ss_pred             ------HHHCCCCCC
Q ss_conf             ------984798779
Q 002727          878 ------ALTHPFISG  886 (887)
Q Consensus       878 ------iL~HPwl~~  886 (887)
                            +++||||.+
T Consensus       258 ~~~~~~i~~Hpff~~  272 (288)
T d1uu3a_         258 MEGYGPLKAHPFFES  272 (288)
T ss_dssp             GTCHHHHHTSGGGTT
T ss_pred             HCCCHHHHCCCCCCC
T ss_conf             737789876976478


No 16 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=397.62  Aligned_cols=256  Identities=23%  Similarity=0.430  Sum_probs=212.3

Q ss_pred             CEECCCE-EEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC---HHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             2434858-899885137851899999767899998179999960560---203777999999999609999999525686
Q 002727          563 EILDGRY-EVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE---TMNKAGQTEVQILKKLAGADPENKRHCIRF  638 (887)
Q Consensus       563 eil~~rY-~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l  638 (887)
                      ...+++| .+..+||+|+||+||+|.+..++    ..||+|++....   .....+.+|+.+|..|      +||||+++
T Consensus         4 ~~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~----~~va~K~i~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~~   73 (270)
T d1t4ha_           4 MSNDGRFLKFDIEIGRGSFKTVYKGLDTETT----VEVAWCELQDRKLTKSERQRFKEEAEMLKGL------QHPNIVRF   73 (270)
T ss_dssp             ECTTSCEEEEEEEEEECSSEEEEEEEETTTC----CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC------CCTTBCCE
T ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEEECCCC----EEEEEEEECHHHCCHHHHHHHHHHHHHHHHC------CCCCEEEE
T ss_conf             4778877885169700828499999999999----5999999851227989999999999999857------99985069


Q ss_pred             CCEEEE----CCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC--EECCCCCCCCCCCCCC
Q ss_conf             401112----68389997621-1239999998166789999999999999999997421156--2315788997312589
Q 002727          639 ASSFKY----RNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCG--VLHCDIKPDNMLVNEA  711 (887)
Q Consensus       639 ~~~~~~----~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~g--IiHrDLKP~NILi~~~  711 (887)
                      +++|..    ...+||||||+ +|+|.+++.....   +++..++.|+.||+.||.|||+++  |||+||||+||||+..
T Consensus        74 ~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~  150 (270)
T d1t4ha_          74 YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP  150 (270)
T ss_dssp             EEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESST
T ss_pred             EEEEEECCCCCCEEEEEEECCCCCCHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECC
T ss_conf             99984033458889999957898948999751355---469999999999999999999789979968767435116679


Q ss_pred             CCEEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             99099982274200588986676557765552446089999435699999999999909999999991899999998509
Q 002727          712 KNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKG  791 (887)
Q Consensus       712 ~~~iKL~DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g  791 (887)
                      ++.+||+|||+|...........+||+.|+|||++.+ .|+.++||||||||||+|++|..||.+......+...+.. +
T Consensus       151 ~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~-~  228 (270)
T d1t4ha_         151 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-G  228 (270)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-T
T ss_pred             CCCEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-C
T ss_conf             9988980057654236876677553813008988478-9998671100799999998788999876559999999973-8


Q ss_pred             CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99766530166666344333355667678246999999986159887454224899999565899999999803139899
Q 002727          792 PFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEK  871 (887)
Q Consensus       792 ~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~  871 (887)
                      ..|..+                                                    +..++..+.+||.+||..||.+
T Consensus       229 ~~~~~~----------------------------------------------------~~~~~~~~~~li~~~l~~dp~~  256 (270)
T d1t4ha_         229 VKPASF----------------------------------------------------DKVAIPEVKEIIEGCIRQNKDE  256 (270)
T ss_dssp             CCCGGG----------------------------------------------------GGCCCHHHHHHHHHHSCSSGGG
T ss_pred             CCCCCC----------------------------------------------------CCCCCHHHHHHHHHHCCCCHHH
T ss_conf             998656----------------------------------------------------7557899999999976379758


Q ss_pred             CCCHHHHHHCCCCC
Q ss_conf             96999898479877
Q 002727          872 RMTVAQALTHPFIS  885 (887)
Q Consensus       872 RpTa~eiL~HPwl~  885 (887)
                      |||+.|||+||||+
T Consensus       257 R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         257 RYSIKDLLNHAFFQ  270 (270)
T ss_dssp             SCCHHHHHTSGGGC
T ss_pred             CCCHHHHHCCCCCC
T ss_conf             92999996775409


No 17 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=396.60  Aligned_cols=249  Identities=22%  Similarity=0.416  Sum_probs=218.8

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             858899885137851899999767899998179999960560----2037779999999996099999995256864011
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE----TMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      .+|.+++.||.|+||+||+|.+..++    ..||||++.+..    .....+..|+.+|..|      .||||++++++|
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g----~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~~~~~~   73 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNG----RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV------THPFIIRMWGTF   73 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTC----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC------CBTTBCCEEEEE
T ss_pred             HHEEEEEEEECCCCCEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCHHHEEEEE
T ss_conf             47088889720768089999998999----79999998457754889999999999999863------696753303568


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      ...+.+||||||+ +++|..++.....   +++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+|||
T Consensus        74 ~~~~~~~ivmE~~~gg~l~~~~~~~~~---~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~-~g~vkL~DFG  149 (316)
T d1fota_          74 QDAQQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK-NGHIKITDFG  149 (316)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT-TSCEEECCCS
T ss_pred             EECCEEEEEEEECCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECC-CCCEEEECCC
T ss_conf             528800567650378632234322221---110079999999987655412476770556810503868-9988983175


Q ss_pred             CCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             42005889866765577655524460899994356999999999999099999999918999999985099976653016
Q 002727          722 NAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       722 ~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      +|...... ....+||+.|+|||++.+..|+.++||||||||||+|++|..||.+.+..+.+..+......+|       
T Consensus       150 ~a~~~~~~-~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p-------  221 (316)
T d1fota_         150 FAKYVPDV-TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP-------  221 (316)
T ss_dssp             SCEECSSC-BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC-------
T ss_pred             CCEEECCC-CCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC-------
T ss_conf             21671245-6434576343599998389998043046533368999759899999699999999970898899-------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-----CHH
Q ss_conf             666634433335566767824699999998615988745422489999956589999999980313989996-----999
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRM-----TVA  876 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~Rp-----Ta~  876 (887)
                                                                       +.++..+.+||.+||..||.+|+     |++
T Consensus       222 -------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~  252 (316)
T d1fota_         222 -------------------------------------------------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTE  252 (316)
T ss_dssp             -------------------------------------------------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTH
T ss_pred             -------------------------------------------------CCCCHHHHHHHHHHHHHCHHHCCCCCHHHHH
T ss_conf             -------------------------------------------------7789999999999954499766643102199


Q ss_pred             HHHHCCCCCC
Q ss_conf             8984798779
Q 002727          877 QALTHPFISG  886 (887)
Q Consensus       877 eiL~HPwl~~  886 (887)
                      +||+||||.+
T Consensus       253 ~il~Hp~f~~  262 (316)
T d1fota_         253 DVKNHPWFKE  262 (316)
T ss_dssp             HHHTSGGGSS
T ss_pred             HHHCCCCCCC
T ss_conf             9981935146


No 18 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=396.78  Aligned_cols=302  Identities=32%  Similarity=0.526  Sum_probs=239.4

Q ss_pred             CCEECCCCC-EE--CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC---CHHHHHHHHHHHHHHHHHCCC
Q ss_conf             931012282-43--485889988513785189999976789999817999996056---020377799999999960999
Q 002727          555 GYYSYRFGE-IL--DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN---ETMNKAGQTEVQILKKLAGAD  628 (887)
Q Consensus       555 g~~~~~~ge-il--~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~---~~~~~~~~~Ei~iL~~L~~~~  628 (887)
                      .||++.+|+ ++  .++|.++++||.|+||+||+|.+..++    ..||||++.+.   ......+..|+.+|..+    
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l----   73 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCV----   73 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTT----EEEEEEEEESTTSSHHHHHHHHHHHHHHHHC----
T ss_pred             CCEEEEECCCCEEECCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCCHHHHHHHHHHHHHHHHC----
T ss_conf             98799958940453377599889621758599999999999----8999999882336979999999999999864----


Q ss_pred             CCCCCCEEEECCEEEE------CCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCC
Q ss_conf             9999525686401112------6838999762112399999981667899999999999999999974211562315788
Q 002727          629 PENKRHCIRFASSFKY------RNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIK  702 (887)
Q Consensus       629 ~~~h~~Iv~l~~~~~~------~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLK  702 (887)
                        +||||++++++|..      .+++||||||+.++|...+.     ..+++..++.++.||+.||.|||++||+|+|||
T Consensus        74 --~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~-----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlK  146 (355)
T d2b1pa1          74 --NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  146 (355)
T ss_dssp             --CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             --CCCCEEEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             --8987648998970256434576269998414467787650-----389999999999999999988652211245677


Q ss_pred             CCCCCCCCCCCEEEEEECCCCEECCCC-CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             997312589990999822742005889-8667655776555244608999943569999999999990999999999189
Q 002727          703 PDNMLVNEAKNVLKLCDFGNAMFAGKN-EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNND  781 (887)
Q Consensus       703 P~NILi~~~~~~iKL~DFG~a~~~~~~-~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~  781 (887)
                      |+|||++. ++.++|+|||++...... ..+..++|+.|+|||++.+..|++++|||||||++|+|++|.+||.+.+...
T Consensus       147 P~Nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~  225 (355)
T d2b1pa1         147 PSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID  225 (355)
T ss_dssp             GGGEEECT-TCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             CCCCCCCC-CCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHH
T ss_conf             63211365-44313201023211466655332214655558133147777877433356625789865989988897788


Q ss_pred             HHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999985099976653016666634433335566767824699999998615988745422489999956589999999
Q 002727          782 MLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLL  861 (887)
Q Consensus       782 ~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL  861 (887)
                      ++..++...+.++..++.........+..........  ..     ..++.       ..............+..+++||
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~-------~~~~~~~~~~~~~~s~~~~dll  291 (355)
T d2b1pa1         226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL--TF-----PKLFP-------DSLFPADSEHNKLKASQARDLL  291 (355)
T ss_dssp             HHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCC--CH-----HHHSC-------GGGSCCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC--CC-----CCCCC-------CCCCCCCCCCCCCCCHHHHHHH
T ss_conf             9999997205898799987656677776417543566--64-----21264-------3335432101333799999999


Q ss_pred             HHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             9803139899969998984798779
Q 002727          862 DKIFVLDPEKRMTVAQALTHPFISG  886 (887)
Q Consensus       862 ~kmL~~DP~~RpTa~eiL~HPwl~~  886 (887)
                      .+||.+||.+||||.|||+||||+.
T Consensus       292 ~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         292 SKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf             9987699457908999966942087


No 19 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=392.40  Aligned_cols=284  Identities=30%  Similarity=0.483  Sum_probs=226.4

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC---CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             485889988513785189999976789999817999996056---02037779999999996099999995256864011
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN---ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      +++|.+++.||+|+||+||+|.+..++   ++.||||++...   ......+.+|+.+|+.|...   +||||++++++|
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~---~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~---~HpnIv~~~~~~   79 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNG---GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF---EHPNVVRLFDVC   79 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTT---TEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT---CCTTBCCEEEEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEEECCC---CEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHC---CCCCCCEEEEEE
T ss_conf             589798889921558699999998889---98999999802324516799999999999987425---898802366322


Q ss_pred             EE-----CCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEE
Q ss_conf             12-----6838999762112399999981667899999999999999999974211562315788997312589990999
Q 002727          643 KY-----RNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKL  717 (887)
Q Consensus       643 ~~-----~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL  717 (887)
                      ..     ..++|||||++.+.+..++... ....+++..++.|+.||+.||.|||+++|||+||||+|||++. .+.+||
T Consensus        80 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~-~~~~kl  157 (305)
T d1blxa_          80 TVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQIKL  157 (305)
T ss_dssp             EEEECSSEEEEEEEEECCSCBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEE
T ss_pred             CCCCCCCCCEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECC-CCCEEE
T ss_conf             14666667469999974058714444430-3789998999999999999999997588983579862789858-997542


Q ss_pred             EECCCCEECCCC-CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             822742005889-8667655776555244608999943569999999999990999999999189999999850999766
Q 002727          718 CDFGNAMFAGKN-EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKK  796 (887)
Q Consensus       718 ~DFG~a~~~~~~-~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~  796 (887)
                      +|||++...... .....+||+.|+|||++.+.+|+.++||||||||||+|++|.+||.+.+..+++..++...+.++..
T Consensus       158 ~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  237 (305)
T d1blxa_         158 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE  237 (305)
T ss_dssp             CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred             CCHHHHHHHCCCCCCCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf             10001011002345777654851148310017988811100032899999987879989989899999999840799611


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf             53016666634433335566767824699999998615988745422489999956589999999980313989996999
Q 002727          797 MLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVA  876 (887)
Q Consensus       797 ~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~  876 (887)
                      .+.............     .                 ....       .......++..+++||.+||++||.+||||.
T Consensus       238 ~~~~~~~~~~~~~~~-----~-----------------~~~~-------~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~  288 (305)
T d1blxa_         238 DWPRDVALPRQAFHS-----K-----------------SAQP-------IEKFVTDIDELGKDLLLKCLTFNPAKRISAY  288 (305)
T ss_dssp             GSCTTCSSCGGGSCC-----C-----------------CCCC-------GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             CCCCCCCCHHHHHCC-----C-----------------CCCC-------HHHCCCCCCHHHHHHHHHHCCCCHHHCCCHH
T ss_conf             053211110333022-----3-----------------4564-------5440445899999999998748966791899


Q ss_pred             HHHHCCCCCC
Q ss_conf             8984798779
Q 002727          877 QALTHPFISG  886 (887)
Q Consensus       877 eiL~HPwl~~  886 (887)
                      |||+||||++
T Consensus       289 e~L~Hpff~~  298 (305)
T d1blxa_         289 SALSHPYFQD  298 (305)
T ss_dssp             HHHTSGGGTT
T ss_pred             HHHCCHHHCC
T ss_conf             9966963407


No 20 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=397.56  Aligned_cols=251  Identities=24%  Similarity=0.332  Sum_probs=211.7

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH----HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCE
Q ss_conf             48588998851378518999997678999981799999605602----03777999999999609999999525686401
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET----MNKAGQTEVQILKKLAGADPENKRHCIRFASS  641 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~  641 (887)
                      ...|.+++.||+|+||+||+|.+..++    ..||||++.....    ....+.+|+.+|..|      .||||++++++
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~~~~~   83 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNS----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL------RHPNTIQYRGC   83 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTT----EEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC------CCTTBCCEEEE
T ss_pred             HHHCEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEE
T ss_conf             785676279701888099999998999----39999998444435889999999999999977------89998238999


Q ss_pred             EEECCEEEEEEECCH-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             112683899976211-2399999981667899999999999999999974211562315788997312589990999822
Q 002727          642 FKYRNHLCLVFESLH-MNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDF  720 (887)
Q Consensus       642 ~~~~~~l~lV~E~~~-gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DF  720 (887)
                      |...+.+|||||||. ++|..++...   ..|++..++.|+.||+.||.|||++||||+||||+||||+. ++.+||+||
T Consensus        84 ~~~~~~~~iv~E~~~~g~l~~~~~~~---~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~-~~~~Kl~DF  159 (309)
T d1u5ra_          84 YLREHTAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE-PGLVKLGDF  159 (309)
T ss_dssp             EEETTEEEEEEECCSEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-TTEEEECCC
T ss_pred             EEECCEEEEEEEECCCCCHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECC-CCCEEEEEC
T ss_conf             99899889999806999457899737---99999999999999999999998689766678842179879-997898443


Q ss_pred             CCCEECCCCCCCCCCCCCCCCCHHHHCC---CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             7420058898667655776555244608---9999435699999999999909999999991899999998509997665
Q 002727          721 GNAMFAGKNEITPYLVSRFYRAPEIILG---LPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKM  797 (887)
Q Consensus       721 G~a~~~~~~~~~~~~gt~~Y~APE~l~~---~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~  797 (887)
                      |+|.....  ....+||+.|+|||++.+   ..|+.++|||||||+||+|++|..||.+.+..+.+..+.....+.+   
T Consensus       160 G~a~~~~~--~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~---  234 (309)
T d1u5ra_         160 GSASIMAP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---  234 (309)
T ss_dssp             TTCBSSSS--BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---
T ss_pred             CCCCCCCC--CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC---
T ss_conf             65334677--8731347663688998346788867214545589999999878899999799999999982899988---


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                                                                         .+..++..+.+||.+||+.||.+|||+.|
T Consensus       235 ---------------------------------------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  263 (309)
T d1u5ra_         235 ---------------------------------------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEV  263 (309)
T ss_dssp             ---------------------------------------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ---------------------------------------------------CCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             ---------------------------------------------------87888999999999977379657918999


Q ss_pred             HHHCCCCCC
Q ss_conf             984798779
Q 002727          878 ALTHPFISG  886 (887)
Q Consensus       878 iL~HPwl~~  886 (887)
                      ||+||||..
T Consensus       264 ll~Hp~~~~  272 (309)
T d1u5ra_         264 LLKHRFVLR  272 (309)
T ss_dssp             HTTCHHHHS
T ss_pred             HHHCHHHCC
T ss_conf             971997537


No 21 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=390.56  Aligned_cols=279  Identities=31%  Similarity=0.513  Sum_probs=226.4

Q ss_pred             CEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE---
Q ss_conf             58899885137851899999767899998179999960560203777999999999609999999525686401112---
Q 002727          568 RYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY---  644 (887)
Q Consensus       568 rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~---  644 (887)
                      .|..+++||+|+||+||+|.+..++    +.||||++....   ....+|+.+|..|      +|+||++++++|..   
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~----~~vAiK~i~~~~---~~~~~Ei~il~~l------~h~niv~~~~~~~~~~~   87 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDK---RFKNRELQIMRKL------DHCNIVRLRYFFYSSGE   87 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTC----CEEEEEEEECCS---SSCCHHHHHHHHC------CCTTBCCEEEEEEEC--
T ss_pred             CCEEEEEEEECCCEEEEEEEECCCC----CEEEEEEECCCC---HHHHHHHHHHHHC------CCCCCCCEEEEEEECCC
T ss_conf             7675169821768399999999999----799999988160---6899999999866------89898738789974476


Q ss_pred             ---CCEEEEEEECCHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             ---6838999762112399999981-667899999999999999999974211562315788997312589990999822
Q 002727          645 ---RNHLCLVFESLHMNLREVLKKF-GRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDF  720 (887)
Q Consensus       645 ---~~~l~lV~E~~~gsL~~lL~~~-~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DF  720 (887)
                         ..++||||||+++++...+... .....|++..++.|+.||+.||.|||++||||+||||+||||+..+..+||+||
T Consensus        88 ~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DF  167 (350)
T d1q5ka_          88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF  167 (350)
T ss_dssp             CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCC
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECC
T ss_conf             57731899998416886078888631036899999999999999999999986687645788603787358971167336


Q ss_pred             CCCEECCC-CCCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             74200588-986676557765552446089-9994356999999999999099999999918999999985099976653
Q 002727          721 GNAMFAGK-NEITPYLVSRFYRAPEIILGL-PYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKML  798 (887)
Q Consensus       721 G~a~~~~~-~~~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l  798 (887)
                      |++..... ......++++.|+|||++.+. .|+.++||||||||||+|++|.+||.+.+..+++..+...+|.++..++
T Consensus       168 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~  247 (350)
T d1q5ka_         168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI  247 (350)
T ss_dssp             TTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             CCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
T ss_conf             60544047765320025555568277640468882100024652778550287998987999999999997489817765


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             01666663443333556676782469999999861598874542248999995658999999998031398999699989
Q 002727          799 RKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQA  878 (887)
Q Consensus       799 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~ei  878 (887)
                      .........+    .+....                 ....      .....+.++..+.+||.+||.+||.+||||.||
T Consensus       248 ~~~~~~~~~~----~~~~~~-----------------~~~~------~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  300 (350)
T d1q5ka_         248 REMNPNYTEF----KFPQIK-----------------AHPW------TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA  300 (350)
T ss_dssp             HHHCC---CC----CCCCCC-----------------CCCG------GGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHCCCHHHC----CCCCCC-----------------CCCH------HHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             4306210110----355445-----------------6744------443156899999999999765895579299999


Q ss_pred             HHCCCCCC
Q ss_conf             84798779
Q 002727          879 LTHPFISG  886 (887)
Q Consensus       879 L~HPwl~~  886 (887)
                      |+||||.+
T Consensus       301 L~Hp~f~~  308 (350)
T d1q5ka_         301 CAHSFFDE  308 (350)
T ss_dssp             HTSGGGGG
T ss_pred             HCCHHHCC
T ss_conf             66984524


No 22 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=391.86  Aligned_cols=281  Identities=31%  Similarity=0.506  Sum_probs=229.4

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC---HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             858899885137851899999767899998179999960560---20377799999999960999999952568640111
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE---TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      ++|.+++.||+|+||+||+|.+..++    +.||||++....   .....+..|+.+|++|      +||||++++++|.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l------~Hp~Iv~~~~~~~   71 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTG----EVVALKKIRLDTETEGVPSTAIREISLLKEL------NHPNIVKLLDVIH   71 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTC----CEEEEEEEC-------CCHHHHHHHHHHTTC------CCTTBCCEEEEEE
T ss_pred             CCCEECCEEECCCCEEEEEEEECCCC----CEEEEEEEEHHHCCHHHHHHHHHHHHHHHHC------CCCCEEEECCCCC
T ss_conf             99776517723768099999999999----7999999802225758999999999999867------9983887445332


Q ss_pred             ECCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             26838999762112399999981667899999999999999999974211562315788997312589990999822742
Q 002727          644 YRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNA  723 (887)
Q Consensus       644 ~~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a  723 (887)
                      ..+++||||||+++++..++.... ...|++..++.|+.||+.||.|||++||||+||||+|||++. ++.+||+|||+|
T Consensus        72 ~~~~~~iv~e~~~~~~~~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~-~~~~kl~DFG~a  149 (298)
T d1gz8a_          72 TENKLYLVFEFLHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT-EGAIKLADFGLA  149 (298)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECSTTHH
T ss_pred             CCCCEEEEEEECCCCHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECC-CCCCEECCCCCC
T ss_conf             243203788623774455544202-568888999999999999999865288992135711401134-676210357861


Q ss_pred             EECCCC--CCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf             005889--866765577655524460899-99435699999999999909999999991899999998509997665301
Q 002727          724 MFAGKN--EITPYLVSRFYRAPEIILGLP-YDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRK  800 (887)
Q Consensus       724 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~-~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~  800 (887)
                      ......  ......+++.|+|||++.... ++.++|||||||+||+|++|..||.+.+..+++..+....+.++...+..
T Consensus       150 ~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  229 (298)
T d1gz8a_         150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG  229 (298)
T ss_dssp             HHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             EECCCCCCCCEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCC
T ss_conf             34368864100103652154112213665777422103333134279668799898899999999998328983331444


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             66666344333355667678246999999986159887454224899999565899999999803139899969998984
Q 002727          801 GAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       801 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~  880 (887)
                      ......+..   .+.........                        ...+.++..+++||.+||++||.+||||.|||+
T Consensus       230 ~~~~~~~~~---~~~~~~~~~~~------------------------~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         230 VTSMPDYKP---SFPKWARQDFS------------------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             GGGSTTCCT---TSCCCCCCCHH------------------------HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCCC---CCCCCCCCCHH------------------------HHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             222421243---45432222044------------------------416678999999999976399557918999967


Q ss_pred             CCCCCC
Q ss_conf             798779
Q 002727          881 HPFISG  886 (887)
Q Consensus       881 HPwl~~  886 (887)
                      ||||++
T Consensus       283 H~ff~~  288 (298)
T d1gz8a_         283 HPFFQD  288 (298)
T ss_dssp             SGGGTT
T ss_pred             CHHHCC
T ss_conf             870146


No 23 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=394.51  Aligned_cols=276  Identities=29%  Similarity=0.489  Sum_probs=221.9

Q ss_pred             EEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH------HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             998851378518999997678999981799999605602------03777999999999609999999525686401112
Q 002727          571 VTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET------MNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       571 i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~------~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      .+++||+|+||+||+|.+..++    +.||||++.....      ....+..|+.+|..|      +||||++++++|..
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l------~hpnIv~~~~~~~~   71 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTN----QIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL------SHPNIIGLLDAFGH   71 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCC----SEEEEEEC------------CTHHHHHHHHHHHC------CCTTBCCEEEEECC
T ss_pred             CCEEECCCCCEEEEEEEECCCC----CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCEEEEEEEECC
T ss_conf             5638512728299999999999----6999999842021245679999999999999867------99998689854225


Q ss_pred             CCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf             68389997621123999999816678999999999999999999742115623157889973125899909998227420
Q 002727          645 RNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAM  724 (887)
Q Consensus       645 ~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~  724 (887)
                      .+++||||||+.+.+...+..  ....+++..++.|+.||+.||.|||++||||+||||+|||++. .+.+||+|||+|.
T Consensus        72 ~~~~~ivmE~~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~-~~~~KL~DFG~a~  148 (299)
T d1ua2a_          72 KSNISLVFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE-NGVLKLADFGLAK  148 (299)
T ss_dssp             TTCCEEEEECCSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCCGGGS
T ss_pred             CCCEEEHHHHHCCHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECC-CCCCCCCCCCCCC
T ss_conf             874022045534507765541--2667789999999999999998863163550357762588537-7841146576100


Q ss_pred             ECCCC--CCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             05889--86676557765552446089-9994356999999999999099999999918999999985099976653016
Q 002727          725 FAGKN--EITPYLVSRFYRAPEIILGL-PYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       725 ~~~~~--~~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      .....  .....++|+.|+|||++.+. .|+.++||||||||||+|++|.+||.+.+..+++..|....+.++...+...
T Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~  228 (299)
T d1ua2a_         149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM  228 (299)
T ss_dssp             TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred             CCCCCCCCCCCEECCHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCH
T ss_conf             05787554330204733363999726778880564363042899998596999999999999999985189972545210


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             66663443333556676782469999999861598874542248999995658999999998031398999699989847
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                      ........    +....                 ...+..+       .+.++..+++||.+||++||.+||||.|||+|
T Consensus       229 ~~~~~~~~----~~~~~-----------------~~~~~~~-------~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         229 CSLPDYVT----FKSFP-----------------GIPLHHI-------FSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             TSSTTCCC----CCCCC-----------------CCCHHHH-------CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HCCCHHHH----HCCCC-----------------CCCHHHH-------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf             00213443----03478-----------------9886785-------65689999999999763894569089999679


Q ss_pred             CCCCCC
Q ss_conf             987799
Q 002727          882 PFISGK  887 (887)
Q Consensus       882 Pwl~~~  887 (887)
                      |||++.
T Consensus       281 p~f~~~  286 (299)
T d1ua2a_         281 KYFSNR  286 (299)
T ss_dssp             GGGTSS
T ss_pred             HHHCCC
T ss_conf             965789


No 24 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=395.31  Aligned_cols=252  Identities=25%  Similarity=0.366  Sum_probs=214.7

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC---HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             858899885137851899999767899998179999960560---20377799999999960999999952568640111
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE---TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      ++|++++.||+|+||+||+|.+..++    ..||||++....   .....+..|+.+|..|      +||||++++++|.
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~~~~~~~   73 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDG----KILVWKELDYGSMTEAEKQMLVSEVNLLREL------KHPNIVRYYDRII   73 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTC----CEEEEEEECCTTSCHHHHHHHHHHHHHTTSC------CCTTBCCEEEEEE
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHHCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEEEE
T ss_conf             33799679830889199999999999----7999999874657979999999999999977------8999824899999


Q ss_pred             E--CCEEEEEEECC-HHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHCCC-----EECCCCCCCCCCCCCCCCE
Q ss_conf             2--68389997621-123999999816-6789999999999999999997421156-----2315788997312589990
Q 002727          644 Y--RNHLCLVFESL-HMNLREVLKKFG-RNIGLKLTAVRAYAKQLFIALKHLKNCG-----VLHCDIKPDNMLVNEAKNV  714 (887)
Q Consensus       644 ~--~~~l~lV~E~~-~gsL~~lL~~~~-~~~~ls~~~~~~i~~qIl~aL~yLHs~g-----IiHrDLKP~NILi~~~~~~  714 (887)
                      .  .+.+||||||+ +|+|.+++.... ....|++..++.|+.||+.||.|||+.+     |||+||||+||||+. ++.
T Consensus        74 ~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~-~~~  152 (269)
T d2java1          74 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQN  152 (269)
T ss_dssp             C----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECT-TSC
T ss_pred             ECCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCC-CCC
T ss_conf             1789989999956899938999985154578999999999999999999999971677887885867654257478-885


Q ss_pred             EEEEECCCCEECCCC--CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             999822742005889--866765577655524460899994356999999999999099999999918999999985099
Q 002727          715 LKLCDFGNAMFAGKN--EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGP  792 (887)
Q Consensus       715 iKL~DFG~a~~~~~~--~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~  792 (887)
                      +||+|||+|......  .....+||+.|+|||++.+..|+.++||||||||||+|++|..||.+.+..+.+..+.....+
T Consensus       153 vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~  232 (269)
T d2java1         153 VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR  232 (269)
T ss_dssp             EEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred             EEEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             79800100032245777556677882327999983999993898875278999980188998998999999999718998


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             97665301666663443333556676782469999999861598874542248999995658999999998031398999
Q 002727          793 FPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKR  872 (887)
Q Consensus       793 ~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~R  872 (887)
                                                                             ..+..++.++.+||.+||+.||.+|
T Consensus       233 -------------------------------------------------------~~~~~~s~~l~~li~~~L~~dp~~R  257 (269)
T d2java1         233 -------------------------------------------------------RIPYRYSDELNEIITRMLNLKDYHR  257 (269)
T ss_dssp             -------------------------------------------------------CCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             -------------------------------------------------------CCCCCCCHHHHHHHHHHCCCCHHHC
T ss_conf             -------------------------------------------------------8974359999999999767995579


Q ss_pred             CCHHHHHHCCCC
Q ss_conf             699989847987
Q 002727          873 MTVAQALTHPFI  884 (887)
Q Consensus       873 pTa~eiL~HPwl  884 (887)
                      ||+.|||+|||+
T Consensus       258 ps~~ell~hp~i  269 (269)
T d2java1         258 PSVEEILENPLI  269 (269)
T ss_dssp             CCHHHHHTSTTC
T ss_pred             CCHHHHHHCCCC
T ss_conf             189999729819


No 25 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=0  Score=387.34  Aligned_cols=257  Identities=29%  Similarity=0.430  Sum_probs=221.0

Q ss_pred             ECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH----------HHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             348588998851378518999997678999981799999605602----------0377799999999960999999952
Q 002727          565 LDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET----------MNKAGQTEVQILKKLAGADPENKRH  634 (887)
Q Consensus       565 l~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~----------~~~~~~~Ei~iL~~L~~~~~~~h~~  634 (887)
                      |.++|++++.||+|+||+||+|.+..++    ..||||++.+...          ....+.+|+.+|..|.     .|||
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~----~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpn   71 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTC----KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-----GHPN   71 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTT----EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-----TCTT
T ss_pred             CCCCCEECEEEECCCCEEEEEEEECCCC----CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----CCCC
T ss_conf             9663888528841768499999999999----899999996244641147888999999999999999850-----7997


Q ss_pred             EEEECCEEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC
Q ss_conf             568640111268389997621-1239999998166789999999999999999997421156231578899731258999
Q 002727          635 CIRFASSFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKN  713 (887)
Q Consensus       635 Iv~l~~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~  713 (887)
                      |++++++|...+++||||||+ +|+|.++|...+.   +++..++.|+.||+.||.|||++||||+||||+||||+. ++
T Consensus        72 Iv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~-~~  147 (277)
T d1phka_          72 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD-DM  147 (277)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TC
T ss_pred             EEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC-CC
T ss_conf             47997621467605999976898668999986599---999999999999999999998759943234625489868-99


Q ss_pred             EEEEEECCCCEECCCC-CCCCCCCCCCCCCHHHHCC------CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             0999822742005889-8667655776555244608------99994356999999999999099999999918999999
Q 002727          714 VLKLCDFGNAMFAGKN-EITPYLVSRFYRAPEIILG------LPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLH  786 (887)
Q Consensus       714 ~iKL~DFG~a~~~~~~-~~~~~~gt~~Y~APE~l~~------~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i  786 (887)
                      .+||+|||++...... .....+||+.|+|||++.+      ..|+.++||||||||||+|++|.+||.+.+....+..+
T Consensus       148 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i  227 (277)
T d1phka_         148 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI  227 (277)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CEEECCCHHEEECCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             83871240316726887213452467888988860534456788992331856560231032288898899999999999


Q ss_pred             HHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             98509997665301666663443333556676782469999999861598874542248999995658999999998031
Q 002727          787 MELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFV  866 (887)
Q Consensus       787 ~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~  866 (887)
                      ......++.                                                    ...+.++.++.+||.+||+
T Consensus       228 ~~~~~~~~~----------------------------------------------------~~~~~~s~~~~~li~~~L~  255 (277)
T d1phka_         228 MSGNYQFGS----------------------------------------------------PEWDDYSDTVKDLVSRFLV  255 (277)
T ss_dssp             HHTCCCCCT----------------------------------------------------TTGGGSCHHHHHHHHHHCC
T ss_pred             HHCCCCCCC----------------------------------------------------CCCCCCCHHHHHHHHHHCC
T ss_conf             818988898----------------------------------------------------5434689999999999765


Q ss_pred             CCCCCCCCHHHHHHCCCCCC
Q ss_conf             39899969998984798779
Q 002727          867 LDPEKRMTVAQALTHPFISG  886 (887)
Q Consensus       867 ~DP~~RpTa~eiL~HPwl~~  886 (887)
                      .||.+|||+.|||+||||++
T Consensus       256 ~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         256 VQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             SSGGGSCCHHHHTTSGGGCT
T ss_pred             CCHHHCCCHHHHHCCHHHHH
T ss_conf             89668919999973978797


No 26 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=391.05  Aligned_cols=250  Identities=26%  Similarity=0.425  Sum_probs=215.1

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH----HHHHHHHHHHHHH-HHHCCCCCCCCCEEEECCE
Q ss_conf             8588998851378518999997678999981799999605602----0377799999999-9609999999525686401
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET----MNKAGQTEVQILK-KLAGADPENKRHCIRFASS  641 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~----~~~~~~~Ei~iL~-~L~~~~~~~h~~Iv~l~~~  641 (887)
                      ++|.+++.||.|+||+||+|.+..++    +.||||++.+...    ....+..|..++. .+      +||||++++++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~----~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~------~hp~Iv~~~~~   71 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTN----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW------EHPFLTHMFCT   71 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTT----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT------TCTTBCCEEEE
T ss_pred             CCEEEEEEEECCCCCEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHC------CCCCEEEEEEE
T ss_conf             97188658940878289999999999----899999980555338489999999999999847------99968789889


Q ss_pred             EEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             11268389997621-12399999981667899999999999999999974211562315788997312589990999822
Q 002727          642 FKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDF  720 (887)
Q Consensus       642 ~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DF  720 (887)
                      |...+.+||||||+ +|+|.++|.....   +++..++.|+.||+.||.|||+++|||+||||+|||++. .+.+||+||
T Consensus        72 ~~~~~~~yivmEy~~~g~L~~~i~~~~~---~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~-~~~~kl~DF  147 (320)
T d1xjda_          72 FQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK-DGHIKIADF  147 (320)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCC
T ss_pred             ECCCCCEEEEEEECCCCCHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECC-CCCEECCCC
T ss_conf             7049831677750379808998640478---999999999999999999998689340347654044448-996301555


Q ss_pred             CCCEECCC--CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             74200588--9866765577655524460899994356999999999999099999999918999999985099976653
Q 002727          721 GNAMFAGK--NEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKML  798 (887)
Q Consensus       721 G~a~~~~~--~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l  798 (887)
                      |+|.....  ...+..+||+.|+|||++.+..|+.++||||||||||+|++|..||.+.+...++..+......+     
T Consensus       148 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~-----  222 (320)
T d1xjda_         148 GMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY-----  222 (320)
T ss_dssp             TTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----
T ss_pred             CHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC-----
T ss_conf             302323566533454578777689999827998832320112278989873889999989999999997189989-----


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH-H
Q ss_conf             016666634433335566767824699999998615988745422489999956589999999980313989996999-8
Q 002727          799 RKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVA-Q  877 (887)
Q Consensus       799 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~-e  877 (887)
                                                                         +..++..+.+||.+||..||.+|||+. +
T Consensus       223 ---------------------------------------------------p~~~s~~~~dli~~~L~~dP~~R~s~~~~  251 (320)
T d1xjda_         223 ---------------------------------------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGD  251 (320)
T ss_dssp             ---------------------------------------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSC
T ss_pred             ---------------------------------------------------CCCCCHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf             ---------------------------------------------------75679999999999654489878388999


Q ss_pred             HHHCCCCCC
Q ss_conf             984798779
Q 002727          878 ALTHPFISG  886 (887)
Q Consensus       878 iL~HPwl~~  886 (887)
                      +|+||||.+
T Consensus       252 l~~hpff~~  260 (320)
T d1xjda_         252 IRQHPLFRE  260 (320)
T ss_dssp             GGGSGGGTT
T ss_pred             HHHCCHHCC
T ss_conf             980901315


No 27 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=395.51  Aligned_cols=259  Identities=24%  Similarity=0.376  Sum_probs=210.6

Q ss_pred             CCCEEEEE-EECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             48588998-85137851899999767899998179999960560203777999999999609999999525686401112
Q 002727          566 DGRYEVTA-AHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       566 ~~rY~i~~-~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      -++|.++. .||.|+||+||+|.+..++    ..||||++...    ..+..|+.++.++.     +||||++++++|..
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~----~~vAiK~i~~~----~~~~~E~~~~~~~~-----~hpnIv~l~~~~~~   76 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQ----EKFALKMLQDC----PKARREVELHWRAS-----QCPHIVRIVDVYEN   76 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTC----CEEEEEEEECS----HHHHHHHHHHHHHT-----TSTTBCCEEEEEEE
T ss_pred             CCCEEEEEEEEEECCCEEEEEEEECCCC----CEEEEEEECCC----HHHHHHHHHHHHHC-----CCCCCCEEEEEEEE
T ss_conf             1487981079654548699999988999----89999998974----77999999999866-----99997829899950


Q ss_pred             ----CCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC--CCEEEE
Q ss_conf             ----68389997621-12399999981667899999999999999999974211562315788997312589--990999
Q 002727          645 ----RNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEA--KNVLKL  717 (887)
Q Consensus       645 ----~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~--~~~iKL  717 (887)
                          ..++||||||| +|+|.++|...+ ...|++..++.|+.||+.||.|||++||+|+||||+|||++..  .+.+||
T Consensus        77 ~~~~~~~~~ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl  155 (335)
T d2ozaa1          77 LYAGRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL  155 (335)
T ss_dssp             EETTEEEEEEEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEE
T ss_pred             CCCCCCEEEEEEECCCCCCHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             3468978999997789984999998627-877579999999999999999999769864441002201135555663113


Q ss_pred             EECCCCEECCC-CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             82274200588-98667655776555244608999943569999999999990999999999189999999850999766
Q 002727          718 CDFGNAMFAGK-NEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKK  796 (887)
Q Consensus       718 ~DFG~a~~~~~-~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~  796 (887)
                      +|||+|..... ......+||+.|+|||++.+..|+.++||||||||||+|++|.+||.+.+.......+.......   
T Consensus       156 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~---  232 (335)
T d2ozaa1         156 TDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG---  232 (335)
T ss_dssp             CCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSC---
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC---
T ss_conf             54551233368886432267756379277748988888888764516778865889988988778899999998538---


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf             53016666634433335566767824699999998615988745422489999956589999999980313989996999
Q 002727          797 MLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVA  876 (887)
Q Consensus       797 ~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~  876 (887)
                                    ...+                               ....+..++..+.+||.+||+.||.+|||+.
T Consensus       233 --------------~~~~-------------------------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  267 (335)
T d2ozaa1         233 --------------QYEF-------------------------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT  267 (335)
T ss_dssp             --------------SSSC-------------------------------CTTHHHHSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             --------------CCCC-------------------------------CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH
T ss_conf             --------------8888-------------------------------9854346999999999997569965790999


Q ss_pred             HHHHCCCCCC
Q ss_conf             8984798779
Q 002727          877 QALTHPFISG  886 (887)
Q Consensus       877 eiL~HPwl~~  886 (887)
                      |||+||||.+
T Consensus       268 eil~hp~~~~  277 (335)
T d2ozaa1         268 EFMNHPWIMQ  277 (335)
T ss_dssp             HHHHSHHHHT
T ss_pred             HHHCCHHHHC
T ss_conf             9970987617


No 28 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=379.34  Aligned_cols=283  Identities=28%  Similarity=0.462  Sum_probs=223.6

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC---CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             85889988513785189999976789999817999996056---020377799999999960999999952568640111
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN---ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      ++|.+++.||+|+||+||+|.+..++    +.||||++...   ......+.+|+.+|..|      +|+||+.++++|.
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l------~h~nii~~~~~~~   79 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTG----QKVALKKVLMENEKEGFPITALREIKILQLL------KHENVVNLIEICR   79 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTC----CEEEEEEC----CTTSSCHHHHHHHHHHHHC------CCTTBCCEEEEEE
T ss_pred             CCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEEEHHHCCHHHHHHHHHHHHHHHHH------CCCCCCCEEEEEE
T ss_conf             79889999722748299999998999----7999999842224637899999999999983------5999660676540


Q ss_pred             E--------CCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEE
Q ss_conf             2--------68389997621123999999816678999999999999999999742115623157889973125899909
Q 002727          644 Y--------RNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVL  715 (887)
Q Consensus       644 ~--------~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~i  715 (887)
                      .        .+++|+|||++.+.+...+...  ...+++..++.|+.||+.||.|||++||||+||||+||||+. ++.+
T Consensus        80 ~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~--~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~-~~~~  156 (318)
T d3blha1          80 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR-DGVL  156 (318)
T ss_dssp             C----------CEEEEEECCCEEHHHHHTCT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TSCE
T ss_pred             CCCCCCCCCCCEEEEEEECCCCCCCCHHHHC--CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECC-CCCE
T ss_conf             2465444457638999853578741012220--344330899999999999998852299885676722203668-9968


Q ss_pred             EEEECCCCEECCCC------CCCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99822742005889------86676557765552446089-999435699999999999909999999991899999998
Q 002727          716 KLCDFGNAMFAGKN------EITPYLVSRFYRAPEIILGL-PYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHME  788 (887)
Q Consensus       716 KL~DFG~a~~~~~~------~~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~  788 (887)
                      ||+|||++......      .....++|+.|+|||++.+. .|+.++||||||||||+|++|.+||.+......+..+..
T Consensus       157 kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~  236 (318)
T d3blha1         157 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ  236 (318)
T ss_dssp             EECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             EEEECCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHH
T ss_conf             76313500223554443211356602497874289970799989178700678646617448799899899999999998


Q ss_pred             HHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             50999766530166666344333355667678246999999986159887454224899999565899999999803139
Q 002727          789 LKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLD  868 (887)
Q Consensus       789 ~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~D  868 (887)
                      ..+.++..++...........  .......... ....+..                     ...+..+++||.+||++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~---------------------~~~~~~~~dLl~~mL~~d  292 (318)
T d3blha1         237 LCGSITPEVWPNVDNYELYEK--LELVKGQKRK-VKDRLKA---------------------YVRDPYALDLIDKLLVLD  292 (318)
T ss_dssp             HHCCCCTTTSTTCCCC---------CCSSCCBC-HHHHHHH---------------------HHCCHHHHHHHHHHSCSS
T ss_pred             HCCCCCHHHCCCCCHHHHHHH--HCCCCCCCCC-CHHHHCC---------------------CCCCHHHHHHHHHHCCCC
T ss_conf             418998255344320344433--2013344555-0334044---------------------459989999999987389


Q ss_pred             CCCCCCHHHHHHCCCCCC
Q ss_conf             899969998984798779
Q 002727          869 PEKRMTVAQALTHPFISG  886 (887)
Q Consensus       869 P~~RpTa~eiL~HPwl~~  886 (887)
                      |.+||||.|||+||||+.
T Consensus       293 P~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         293 PAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             TTTSCCHHHHHHSGGGSS
T ss_pred             HHHCCCHHHHHCCHHHCC
T ss_conf             658909999974950156


No 29 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=380.39  Aligned_cols=278  Identities=31%  Similarity=0.479  Sum_probs=223.9

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             485889988513785189999976789999817999996056--020377799999999960999999952568640111
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      +.+|.++..||.|+||+||+|.+..++    ..||||++.+.  ......+..|+.+|..|      +||+|+++++++.
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l------~hp~iv~~~~~~~   76 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNK----VRVAIKKISPFEHQTYCQRTLREIKILLRF------RHENIIGINDIIR   76 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTC----SEEEEEEECCTTCHHHHHHHHHHHHHHHHC------CCTTBCCCCEEEC
T ss_pred             CCCEEEEEEEEECCCEEEEEEEECCCC----CEEEEEEEEHHCCHHHHHHHHHHHHHHHHC------CCCCCCCEEEEEE
T ss_conf             898599789940648099999999999----499999980310958999999999999976------8989885888995


Q ss_pred             EC-----CEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf             26-----8389997621123999999816678999999999999999999742115623157889973125899909998
Q 002727          644 YR-----NHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLC  718 (887)
Q Consensus       644 ~~-----~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~  718 (887)
                      ..     .++|||+++++++|.+++...    .|++..++.++.||+.||.|||++||||+||||+||||+. .+.+||+
T Consensus        77 ~~~~~~~~~~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~-~~~~kl~  151 (345)
T d1pmea_          77 APTIEQMKDVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKIC  151 (345)
T ss_dssp             CSSTTTCCCEEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEEC
T ss_pred             ECCCCCCCEEEEEEEECCCCHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC-CCCEEEC
T ss_conf             0564554149999962598656644058----9999999999999999999999789867778764378879-9977875


Q ss_pred             ECCCCEECCCC-----CCCCCCCCCCCCCHHHHCC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             22742005889-----8667655776555244608-99994356999999999999099999999918999999985099
Q 002727          719 DFGNAMFAGKN-----EITPYLVSRFYRAPEIILG-LPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGP  792 (887)
Q Consensus       719 DFG~a~~~~~~-----~~~~~~gt~~Y~APE~l~~-~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~  792 (887)
                      |||+|......     .....++++.|+|||++.. ..|+.++||||||||+|+|++|..||.+.+..++...+...+..
T Consensus       152 DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~  231 (345)
T d1pmea_         152 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS  231 (345)
T ss_dssp             CCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred             CCCCEEECCCCCCCCEEECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             45705650477764101011026520003878604788874101004670133776697997888889999987652069


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             9766530166666344333355667678246999999986159---8874542248999995658999999998031398
Q 002727          793 FPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIK---PKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDP  869 (887)
Q Consensus       793 ~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP  869 (887)
                      ++...........                     .........   ......       ..+.++..+++||.+||.+||
T Consensus       232 ~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~li~~~L~~dP  283 (345)
T d1pmea_         232 PSQEDLNCIINLK---------------------ARNYLLSLPHKNKVPWNR-------LFPNADSKALDLLDKMLTFNP  283 (345)
T ss_dssp             CCHHHHHTCCCHH---------------------HHHHHHTSCCCCCCCHHH-------HCTTSCHHHHHHHHHHSCSST
T ss_pred             CCHHHHHHHHHHH---------------------HHCCCCCCCCCCCCCHHH-------HCCCCCHHHHHHHHHHCCCCH
T ss_conf             9756642343322---------------------220244677557787778-------378999999999999764895


Q ss_pred             CCCCCHHHHHHCCCCCC
Q ss_conf             99969998984798779
Q 002727          870 EKRMTVAQALTHPFISG  886 (887)
Q Consensus       870 ~~RpTa~eiL~HPwl~~  886 (887)
                      .+||||.|||+||||+.
T Consensus       284 ~~R~ta~e~L~hpf~~~  300 (345)
T d1pmea_         284 HKRIEVEQALAHPYLEQ  300 (345)
T ss_dssp             TTSCCHHHHHTSGGGTT
T ss_pred             HHCCCHHHHHCCHHHCC
T ss_conf             67908999861986555


No 30 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=388.53  Aligned_cols=249  Identities=27%  Similarity=0.438  Sum_probs=210.8

Q ss_pred             ECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH-------HHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             348588998851378518999997678999981799999605602-------0377799999999960999999952568
Q 002727          565 LDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET-------MNKAGQTEVQILKKLAGADPENKRHCIR  637 (887)
Q Consensus       565 l~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~-------~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~  637 (887)
                      +.++|.+.+.||+|+||+||+|.+..++    ..||||++.+...       ....+..|+.+|..+..    .||||++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~----~h~nIv~   73 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSGVIR   73 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTC----CEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SSCSBCC
T ss_pred             CCCEEEEEEEEEECCCEEEEEEEECCCC----CEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCC----CCCCCCE
T ss_conf             7883799679840878399999999999----7999999856884433455679999999999997435----8988127


Q ss_pred             ECCEEEECCEEEEEEECCH--HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEE
Q ss_conf             6401112683899976211--23999999816678999999999999999999742115623157889973125899909
Q 002727          638 FASSFKYRNHLCLVFESLH--MNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVL  715 (887)
Q Consensus       638 l~~~~~~~~~l~lV~E~~~--gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~i  715 (887)
                      ++++|...+.+|+|||++.  ++|..++.....   +++..++.|+.||+.||.|||++||||+||||+||||+...+.+
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~---l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~v  150 (273)
T d1xwsa_          74 LLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL  150 (273)
T ss_dssp             EEEEEECSSEEEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEE
T ss_pred             EEEEEEECCEEEEEEEECCCCCHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEE
T ss_conf             999983099689999833686228999861589---99999999999999999999877975566761114774478848


Q ss_pred             EEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             998227420058898667655776555244608999-9435699999999999909999999991899999998509997
Q 002727          716 KLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLPY-DHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFP  794 (887)
Q Consensus       716 KL~DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~-t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p  794 (887)
                      ||+|||+|........+..+||+.|+|||++.+..+ +.++||||||||||+|++|..||.+..  .    +....    
T Consensus       151 kl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~----i~~~~----  220 (273)
T d1xwsa_         151 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----IIRGQ----  220 (273)
T ss_dssp             EECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHHCC----
T ss_pred             EECCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCH--H----HHHCC----
T ss_conf             9775465353244455665658774799998489978865332554034536756889988736--7----76154----


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             66530166666344333355667678246999999986159887454224899999565899999999803139899969
Q 002727          795 KKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMT  874 (887)
Q Consensus       795 ~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpT  874 (887)
                                                                          ...++.++.++.+||.+||+.||.+|||
T Consensus       221 ----------------------------------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s  248 (273)
T d1xwsa_         221 ----------------------------------------------------VFFRQRVSSECQHLIRWCLALRPSDRPT  248 (273)
T ss_dssp             ----------------------------------------------------CCCSSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ----------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCC
T ss_conf             ----------------------------------------------------4778779999999999976089758939


Q ss_pred             HHHHHHCCCCCC
Q ss_conf             998984798779
Q 002727          875 VAQALTHPFISG  886 (887)
Q Consensus       875 a~eiL~HPwl~~  886 (887)
                      +.|||+||||++
T Consensus       249 ~~eil~hp~~~~  260 (273)
T d1xwsa_         249 FEEIQNHPWMQD  260 (273)
T ss_dssp             HHHHHTSGGGSS
T ss_pred             HHHHHCCHHHCC
T ss_conf             999853986678


No 31 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=0  Score=380.84  Aligned_cols=279  Identities=30%  Similarity=0.493  Sum_probs=225.4

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC---HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             858899885137851899999767899998179999960560---20377799999999960999999952568640111
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE---TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      ++|.++++||.|+||+||+|.+. ++    +.||||++....   .....+.+|+.+|..|      +||||++++++|.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~~~~~~~   70 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YG----ETFALKKIRLEKEDEGIPSTTIREISILKEL------KHSNIVKLYDVIH   70 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TS----CEEEEEEECCSSGGGCCCHHHHHHHHGGGGC------CCTTBCCEEEEEE
T ss_pred             CCCEECCEEECCCCCEEEEEEEC-CC----CEEEEEEEEHHHCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEECC
T ss_conf             99634318722778189999968-99----9999999812326858999999999999867------9986876601204


Q ss_pred             ECCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             26838999762112399999981667899999999999999999974211562315788997312589990999822742
Q 002727          644 YRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNA  723 (887)
Q Consensus       644 ~~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a  723 (887)
                      ..+.+|+||+++.+.+...+...  ...|++..++.|+.||+.||.|||+.+|||+||||+||||+. ++.+||+|||+|
T Consensus        71 ~~~~~~i~~e~~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~-~~~~kl~DfG~a  147 (286)
T d1ob3a_          71 TKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR-EGELKIADFGLA  147 (286)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECCTTHH
T ss_pred             CCCCEEEEEEEEHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECC-CCCEEECCCCCC
T ss_conf             67731589974004567899860--477514456899999999999860574882678775056868-997873236643


Q ss_pred             EECCCCC--CCCCCCCCCCCCHHHHCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf             0058898--6676557765552446089-999435699999999999909999999991899999998509997665301
Q 002727          724 MFAGKNE--ITPYLVSRFYRAPEIILGL-PYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRK  800 (887)
Q Consensus       724 ~~~~~~~--~~~~~gt~~Y~APE~l~~~-~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~  800 (887)
                      .......  .....+++.|+|||++.+. .++.++|||||||+||+|++|.+||.+.+..+++..+....+.++...+..
T Consensus       148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  227 (286)
T d1ob3a_         148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN  227 (286)
T ss_dssp             HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             EECCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC
T ss_conf             01146765410102431101378871788888410021117589999779799898898999999998638997110421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             66666344333355667678246999999986159887454224899999565899999999803139899969998984
Q 002727          801 GAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       801 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~  880 (887)
                      ......+ ......  ..                 +..       .....+.++..+.+||.+||++||.+||||.|||+
T Consensus       228 ~~~~~~~-~~~~~~--~~-----------------~~~-------~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         228 VTELPKY-DPNFTV--YE-----------------PLP-------WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             GGGSTTC-CTTCCC--CC-----------------CCC-------GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHC-CCCCCC--CC-----------------CCC-------HHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             2333221-433333--56-----------------764-------66651258999999999986689668909999856


Q ss_pred             CCCCCC
Q ss_conf             798779
Q 002727          881 HPFISG  886 (887)
Q Consensus       881 HPwl~~  886 (887)
                      ||||++
T Consensus       281 Hp~f~~  286 (286)
T d1ob3a_         281 HAYFKE  286 (286)
T ss_dssp             SGGGGC
T ss_pred             CCCCCC
T ss_conf             922074


No 32 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=375.67  Aligned_cols=311  Identities=30%  Similarity=0.528  Sum_probs=244.7

Q ss_pred             CEECCCCCEEC-CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC----
Q ss_conf             31012282434-8588998851378518999997678999981799999605602037779999999996099999----
Q 002727          556 YYSYRFGEILD-GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPE----  630 (887)
Q Consensus       556 ~~~~~~geil~-~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~----  630 (887)
                      |||+.+|++|. ++|.++++||.|+||+||+|.+..++    +.||||++.+..........|+.+|+.|.+....    
T Consensus         1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g----~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~   76 (362)
T d1q8ya_           1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNN----THVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS   76 (362)
T ss_dssp             CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTT----EEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHH
T ss_pred             CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCC----CEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             97888888844785799899750778189999999999----79999998343133689999999999840145555542


Q ss_pred             -CCCCEEEECCEEEEC--CEEEEEEECC--HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCEECCCCCCC
Q ss_conf             -995256864011126--8389997621--12399999981667899999999999999999974211-56231578899
Q 002727          631 -NKRHCIRFASSFKYR--NHLCLVFESL--HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKN-CGVLHCDIKPD  704 (887)
Q Consensus       631 -~h~~Iv~l~~~~~~~--~~l~lV~E~~--~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs-~gIiHrDLKP~  704 (887)
                       .|+||+++++++...  ...++|+.++  .+........ .....+++..++.++.||+.||.|||+ .||+|+||||+
T Consensus        77 ~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~  155 (362)
T d1q8ya_          77 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK-YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE  155 (362)
T ss_dssp             HHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHH-TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred             CCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf             2767647899876312565202343200035420000012-234678689999999999999888764058646567705


Q ss_pred             CCCCCCCCC-----EEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC-
Q ss_conf             731258999-----09998227420058898667655776555244608999943569999999999990999999999-
Q 002727          705 NMLVNEAKN-----VLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGAT-  778 (887)
Q Consensus       705 NILi~~~~~-----~iKL~DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~-  778 (887)
                      ||||+..+.     .++|+|||.+..... .....++++.|+|||++.+..|+.++|||||||+|++|++|+.||.... 
T Consensus       156 NIll~~~~~~~~~~~~kl~dfg~s~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~  234 (362)
T d1q8ya_         156 NVLMEIVDSPENLIQIKIADLGNACWYDE-HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG  234 (362)
T ss_dssp             GEEEEEEETTTTEEEEEECCCTTCEETTB-CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             HEEEECCCCCCCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             70563057656443056753144212344-54223665210571321466777643201237899999878899898755


Q ss_pred             -----HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf             -----189999999850999766530166666344333355667678246999999986159887454224899999565
Q 002727          779 -----NNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKM  853 (887)
Q Consensus       779 -----~~~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  853 (887)
                           ..+.+..++.++|.+|..++..+.+...+|+..............              .....+..........
T Consensus       235 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~  300 (362)
T d1q8ya_         235 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW--------------PLEDVLTEKYKFSKDE  300 (362)
T ss_dssp             ----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC--------------CHHHHHHHTTCCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCC--------------CHHHHCCCCCCCCCCC
T ss_conf             43210268999999983799878862453220001320122024323577--------------6444210001567435


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             899999999803139899969998984798779
Q 002727          854 LANFKDLLDKIFVLDPEKRMTVAQALTHPFISG  886 (887)
Q Consensus       854 s~~~~dLL~kmL~~DP~~RpTa~eiL~HPwl~~  886 (887)
                      +..+++||.+||.+||.+||||.|||+||||++
T Consensus       301 ~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~  333 (362)
T d1q8ya_         301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  333 (362)
T ss_dssp             HHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             CHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf             899999999987799457908999966934078


No 33 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=0  Score=377.21  Aligned_cols=283  Identities=26%  Similarity=0.440  Sum_probs=216.9

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE-
Q ss_conf             4858899885137851899999767899998179999960560203777999999999609999999525686401112-
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY-  644 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~-  644 (887)
                      .++|.++++||+|+||+||+|.+..++    +.||||++....  ...+..|+.+|..|.     .||||++++++|.. 
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~----~~vAiK~i~~~~--~~~~~~Ei~il~~l~-----~hpnIv~~~~~~~~~  102 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNN----EKVVVKILKPVK--KKKIKREIKILENLR-----GGPNIITLADIVKDP  102 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTT----EEEEEEEECSSC--HHHHHHHHHHHHHHT-----TSTTBCCEEEEEECT
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECHHH--HHHHHHHHHHHHHCC-----CCCCCCEEEEEEEEC
T ss_conf             867189789831748199999988999----799999988899--999999999998515-----799876799999816


Q ss_pred             -CCEEEEEEECCH-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             -683899976211-239999998166789999999999999999997421156231578899731258999099982274
Q 002727          645 -RNHLCLVFESLH-MNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGN  722 (887)
Q Consensus       645 -~~~l~lV~E~~~-gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~  722 (887)
                       ..++|+||||+. ++|..++      ..|++..++.++.||+.||.|||++||||+||||+||||+..+..+||+|||+
T Consensus       103 ~~~~~~~v~e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~  176 (328)
T d3bqca1         103 VSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL  176 (328)
T ss_dssp             TTCSEEEEEECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGG
T ss_pred             CCCCEEEEEEECCCCCHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCC
T ss_conf             877126888631798589974------68999999999999999998876433443456441237748998366415654


Q ss_pred             CEECCCC-CCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHHHCCCC-HHHH
Q ss_conf             2005889-866765577655524460899-9943569999999999990999999999-1899999998509997-6653
Q 002727          723 AMFAGKN-EITPYLVSRFYRAPEIILGLP-YDHPLDIWSVGCCLYELYTGKVLFPGAT-NNDMLRLHMELKGPFP-KKML  798 (887)
Q Consensus       723 a~~~~~~-~~~~~~gt~~Y~APE~l~~~~-~t~~sDIwSLGviL~eLltG~~PF~~~~-~~~~l~~i~~~~g~~p-~~~l  798 (887)
                      |...... .....++|+.|+|||++.+.. |+.++|||||||+||+|++|..||.... ...+...+...++.+. ..++
T Consensus       177 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~  256 (328)
T d3bqca1         177 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI  256 (328)
T ss_dssp             CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             26646887444322486424761026888888452323354555876048899988760189999999987884155555


Q ss_pred             HCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             0166666-344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          799 RKGAFTD-QHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       799 ~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                      ....... ..+...+...                   .......  .........++.++++||.+||.+||.+||||.|
T Consensus       257 ~~~~~~~~~~~~~~~~~~-------------------~~~~~~~--~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e  315 (328)
T d3bqca1         257 DKYNIELDPRFNDILGRH-------------------SRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE  315 (328)
T ss_dssp             HHTTCCCCGGGGGTCCCC-------------------CCCCGGG--GCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHCCCCCCCCCCHHCCCC-------------------CCCCHHH--CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             422544474300000333-------------------4331121--1552112448999999999986699568908999


Q ss_pred             HHHCCCCCC
Q ss_conf             984798779
Q 002727          878 ALTHPFISG  886 (887)
Q Consensus       878 iL~HPwl~~  886 (887)
                      ||+||||+.
T Consensus       316 ~L~Hp~F~~  324 (328)
T d3bqca1         316 AMEHPYFYT  324 (328)
T ss_dssp             HHTSGGGTT
T ss_pred             HHCCCCCCC
T ss_conf             964935588


No 34 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=377.90  Aligned_cols=288  Identities=33%  Similarity=0.522  Sum_probs=229.0

Q ss_pred             CCEECCCCC-EE--CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC---HHHHHHHHHHHHHHHHHCCC
Q ss_conf             931012282-43--4858899885137851899999767899998179999960560---20377799999999960999
Q 002727          555 GYYSYRFGE-IL--DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE---TMNKAGQTEVQILKKLAGAD  628 (887)
Q Consensus       555 g~~~~~~ge-il--~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~---~~~~~~~~Ei~iL~~L~~~~  628 (887)
                      +||...++. ++  .++|.+++.||.|+||+||+|.+..++    +.||||++.+..   .....+.+|+.+|..|    
T Consensus         3 ~~~~~~~~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l----   74 (348)
T d2gfsa1           3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG----LRVAVKKLSRPFQSIIHAKRTYRELRLLKHM----   74 (348)
T ss_dssp             CEEEEECSSSEEEEETTEEEEEECGGGTTSSEEEEEETTTT----EEEEEEECSCTTSSHHHHHHHHHHHHHHHHC----
T ss_pred             CCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECCHHCCHHHHHHHHHHHHHHHHC----
T ss_conf             70787037755458987188889831788399999999999----7999999882002868999999999999866----


Q ss_pred             CCCCCCEEEECCEEEEC------CEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCC
Q ss_conf             99995256864011126------838999762112399999981667899999999999999999974211562315788
Q 002727          629 PENKRHCIRFASSFKYR------NHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIK  702 (887)
Q Consensus       629 ~~~h~~Iv~l~~~~~~~------~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLK  702 (887)
                        .|+||++++++|...      +++|+++++++++|.+++..    ..|++..++.|+.||+.||.|||++||||+|||
T Consensus        75 --~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiK  148 (348)
T d2gfsa1          75 --KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK  148 (348)
T ss_dssp             --CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             --CCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             --89874259999963464566864999996258862320022----453099999999999999999973887651667


Q ss_pred             CCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             997312589990999822742005889866765577655524460899-9943569999999999990999999999189
Q 002727          703 PDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLP-YDHPLDIWSVGCCLYELYTGKVLFPGATNND  781 (887)
Q Consensus       703 P~NILi~~~~~~iKL~DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~~-~t~~sDIwSLGviL~eLltG~~PF~~~~~~~  781 (887)
                      |+|||++. ++.+||+|||++..... ......|++.|+|||++.+.. ++.++|||||||+||+|++|.+||.+.+...
T Consensus       149 p~NILi~~-~~~~kl~dfg~a~~~~~-~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~  226 (348)
T d2gfsa1         149 PSNLAVNE-DCELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID  226 (348)
T ss_dssp             GGGEEECT-TCCEEECCC----CCTG-GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             CCCCCCCC-CCCCCCCCCCHHCCCCC-CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf             76334554-32200132100012575-44443454355583553377567855124320589999976889978898899


Q ss_pred             HHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             99999985099976653016666634433335566767824699999998615---988745422489999956589999
Q 002727          782 MLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNI---KPKDIGSIVTASPGEDPKMLANFK  858 (887)
Q Consensus       782 ~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~s~~~~  858 (887)
                      ....+....+.++..+........                     ........   ....+..       ....++..++
T Consensus       227 ~~~~i~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~  278 (348)
T d2gfsa1         227 QLKLILRLVGTPGAELLKKISSES---------------------ARNYIQSLTQMPKMNFAN-------VFIGANPLAV  278 (348)
T ss_dssp             HHHHHHHHHCCCCHHHHTTCCCHH---------------------HHHHHTTSCCCCCCCHHH-------HSTTCCHHHH
T ss_pred             HHHHHHHHCCCCCHHHHHHCCCHH---------------------HHHHHHHCCCCCCCCHHH-------HCCCCCHHHH
T ss_conf             999999730799757732001024---------------------454443035578755566-------2678999999


Q ss_pred             HHHHHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             9999803139899969998984798779
Q 002727          859 DLLDKIFVLDPEKRMTVAQALTHPFISG  886 (887)
Q Consensus       859 dLL~kmL~~DP~~RpTa~eiL~HPwl~~  886 (887)
                      +||.+||.+||.+||||.|||+||||++
T Consensus       279 dli~~mL~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         279 DLLEKMLVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHCCCCHHHCCCHHHHHCCHHHCC
T ss_conf             9999977588345938999855995487


No 35 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=368.70  Aligned_cols=279  Identities=28%  Similarity=0.433  Sum_probs=223.4

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC---HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             858899885137851899999767899998179999960560---20377799999999960999999952568640111
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE---TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      ++|.+++.||+|+||+||+|.+..++    ..||||+++...   .....+.+|+.+|+.+      .|+||++++++|.
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l------~h~niv~~~~~~~   71 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETH----EIVALKRVRLDDDDEGVPSSALREICLLKEL------KHKNIVRLHDVLH   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTC----CEEEEEEEESSCSSTTHHHHHHHHHHHHTTC------CCTTBCCEEEEEE
T ss_pred             CCCEEEEEEECCCCEEEEEEEECCCC----CEEEEEEEEHHHCCHHHHHHHHHHHHHHHHC------CCCCEEEECCCCC
T ss_conf             99786269712868199999999999----6999999803217868999999999999856------7578882135444


Q ss_pred             ECCEEEEEEECCHH-HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             26838999762112-39999998166789999999999999999997421156231578899731258999099982274
Q 002727          644 YRNHLCLVFESLHM-NLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGN  722 (887)
Q Consensus       644 ~~~~l~lV~E~~~g-sL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~  722 (887)
                      ....++||++++.+ .|..++...   ..+++..++.++.||+.||.|||.+||||+||||+|||++. .+.+||+|||.
T Consensus        72 ~~~~~~iv~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~-~~~~kl~DFG~  147 (292)
T d1unla_          72 SDKKLTLVFEFCDQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR-NGELKLANFGL  147 (292)
T ss_dssp             CSSEEEEEEECCSEEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTT
T ss_pred             CCCCEEEEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC-CCCEEEEECCH
T ss_conf             443115886302332221121235---65403678999999999987743399860014676121133-78266520460


Q ss_pred             CEECCCCC--CCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             20058898--66765577655524460899-99435699999999999909999-9999918999999985099976653
Q 002727          723 AMFAGKNE--ITPYLVSRFYRAPEIILGLP-YDHPLDIWSVGCCLYELYTGKVL-FPGATNNDMLRLHMELKGPFPKKML  798 (887)
Q Consensus       723 a~~~~~~~--~~~~~gt~~Y~APE~l~~~~-~t~~sDIwSLGviL~eLltG~~P-F~~~~~~~~l~~i~~~~g~~p~~~l  798 (887)
                      |.......  .....++..|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+.+..+....+.++...+
T Consensus       148 a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (292)
T d1unla_         148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW  227 (292)
T ss_dssp             CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC
T ss_pred             HHCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
T ss_conf             11046887510010344310146675069888804440265418899851899998899999999999861189973551


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             01666663443333556676782469999999861598874542248999995658999999998031398999699989
Q 002727          799 RKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQA  878 (887)
Q Consensus       799 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~ei  878 (887)
                      ........+..                           ..............+.++..+.+||.+||++||.+||||+||
T Consensus       228 ~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~  280 (292)
T d1unla_         228 PSMTKLPDYKP---------------------------YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA  280 (292)
T ss_dssp             TTGGGSTTCCC---------------------------CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHCCCCCC---------------------------CCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             34432221133---------------------------444544310433065689999999999864996689099999


Q ss_pred             HHCCCCCC
Q ss_conf             84798779
Q 002727          879 LTHPFISG  886 (887)
Q Consensus       879 L~HPwl~~  886 (887)
                      |+||||++
T Consensus       281 L~Hp~f~~  288 (292)
T d1unla_         281 LQHPYFSD  288 (292)
T ss_dssp             TTSGGGSS
T ss_pred             HCCHHHCC
T ss_conf             64953407


No 36 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=368.54  Aligned_cols=259  Identities=20%  Similarity=0.303  Sum_probs=213.6

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCC-CCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2434858899885137851899999767899-99817999996056--02037779999999996099999995256864
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGN-GEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~-~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      ++-.++|.++++||.|+||+||+|.+...+. .....||+|++...  ......+..|+.+|..|.     +|||||+++
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~HpnIv~l~  107 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-----SHENIVNLL  107 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTTBCCEE
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC-----CCCCEEEEE
T ss_conf             577899397019830788199999985788554204999999663358789999999999999715-----899686877


Q ss_pred             CEEEECCEEEEEEECC-HHHHHHHHHHHCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHCCCEEC
Q ss_conf             0111268389997621-1239999998166--------------------789999999999999999997421156231
Q 002727          640 SSFKYRNHLCLVFESL-HMNLREVLKKFGR--------------------NIGLKLTAVRAYAKQLFIALKHLKNCGVLH  698 (887)
Q Consensus       640 ~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~--------------------~~~ls~~~~~~i~~qIl~aL~yLHs~gIiH  698 (887)
                      ++|...+.+||||||+ +|+|.++|.....                    ...|++..++.|+.||+.||.|||+++|||
T Consensus       108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiH  187 (325)
T d1rjba_         108 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  187 (325)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf             88862995899997279995999998625777510221000012220012577899999999999999999997399050


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCEECCCCC----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCC
Q ss_conf             57889973125899909998227420058898----667655776555244608999943569999999999990-9999
Q 002727          699 CDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNE----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVL  773 (887)
Q Consensus       699 rDLKP~NILi~~~~~~iKL~DFG~a~~~~~~~----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~P  773 (887)
                      +||||+|||++. ++.+||+|||+|.......    .....+|+.|+|||++.+..|+.++||||||||||+|++ |.+|
T Consensus       188 RDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~P  266 (325)
T d1rjba_         188 RDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  266 (325)
T ss_dssp             TTCSGGGEEEET-TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             CCCCHHCCCCCC-CCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCC
T ss_conf             527032144345-9828985142222045778615623435787657838872799996330300039999998389999


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99999189999999850999766530166666344333355667678246999999986159887454224899999565
Q 002727          774 FPGATNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKM  853 (887)
Q Consensus       774 F~~~~~~~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  853 (887)
                      |.+.+....+..++.....+                                                      ..+..+
T Consensus       267 f~~~~~~~~~~~~~~~~~~~------------------------------------------------------~~p~~~  292 (325)
T d1rjba_         267 YPGIPVDANFYKLIQNGFKM------------------------------------------------------DQPFYA  292 (325)
T ss_dssp             STTCCCSHHHHHHHHTTCCC------------------------------------------------------CCCTTC
T ss_pred             CCCCCHHHHHHHHHHCCCCC------------------------------------------------------CCCCCC
T ss_conf             99989899999998569989------------------------------------------------------988767


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             8999999998031398999699989847
Q 002727          854 LANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       854 s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                      +..+.+||.+||+.||.+|||+.|||+|
T Consensus       293 ~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         293 TEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf             8999999999758896689399999999


No 37 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=368.55  Aligned_cols=251  Identities=18%  Similarity=0.227  Sum_probs=209.9

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             24348588998851378518999997678999981799999605602037779999999996099999995256864011
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      ++-..+|.+.+.||.|+||+||+|.+..++    ..||||++..+......+.+|+.+|..|      +||||++++++|
T Consensus        13 ei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~----~~vAvK~i~~~~~~~~~~~~E~~il~~l------~HpnIv~~~~~~   82 (287)
T d1opja_          13 EMERTDITMKHKLGGGQYGEVYEGVWKKYS----LTVAVKTLKEDTMEVEEFLKEAAVMKEI------KHPNLVQLLGVC   82 (287)
T ss_dssp             BCCGGGEEEEEETTTTTTSSEEEEEEGGGT----EEEEEEECCTTCSCHHHHHHHHHHHHHC------CCTTBCCEEEEE
T ss_pred             EECHHHEEEEEEEEECCCEEEEEEEECCCC----EEEEEEEECCCCCHHHHHHHHHHHHHHC------CCCCEECCCCCE
T ss_conf             745799398659820888089999999999----6999999777610399999999999867------999882677527


Q ss_pred             EECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             1268389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          643 KYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       643 ~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      ...+.+||||||+ +|+|..+|.... ...+++..+..|+.||+.||.|||++||||+||||+||||+. ++.+||+|||
T Consensus        83 ~~~~~~~iv~E~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFG  160 (287)
T d1opja_          83 TREPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE-NHLVKVADFG  160 (287)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCC
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC-CCCEEECCCC
T ss_conf             45785478763146760677753035-541579999999999999788898789305760457689989-9928983244


Q ss_pred             CCEECCCCCC---CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             4200588986---6765577655524460899994356999999999999099999-99991899999998509997665
Q 002727          722 NAMFAGKNEI---TPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLF-PGATNNDMLRLHMELKGPFPKKM  797 (887)
Q Consensus       722 ~a~~~~~~~~---~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF-~~~~~~~~l~~i~~~~g~~p~~~  797 (887)
                      +|........   ....+++.|+|||++.+..|+.++|||||||+||+|++|..|| .+.+.......+... ..     
T Consensus       161 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~-----  234 (287)
T d1opja_         161 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YR-----  234 (287)
T ss_dssp             CTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CC-----
T ss_pred             CEEECCCCCCEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC-CC-----
T ss_conf             546537887221035566546669278727999810430217899999986799887742599999998558-88-----


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                                                                       +..+..++..+.+||.+||+.||.+|||+.+
T Consensus       235 -------------------------------------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  265 (287)
T d1opja_         235 -------------------------------------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAE  265 (287)
T ss_dssp             -------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -------------------------------------------------CCCCCCCHHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             -------------------------------------------------8887433099999999975779768939999


Q ss_pred             HHH
Q ss_conf             984
Q 002727          878 ALT  880 (887)
Q Consensus       878 iL~  880 (887)
                      |++
T Consensus       266 i~~  268 (287)
T d1opja_         266 IHQ  268 (287)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999


No 38 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=365.51  Aligned_cols=256  Identities=24%  Similarity=0.366  Sum_probs=213.3

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             2434858899885137851899999767899998179999960560----203777999999999609999999525686
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE----TMNKAGQTEVQILKKLAGADPENKRHCIRF  638 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l  638 (887)
                      ..+.++|.+++.||.|+||+||+|.+..++    +.||||++.+..    .....+..|+.+|..+      +||||+++
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~------~hpniv~~   72 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLH----RDVAVKVLRADLARDPSFYLRFRREAQNAAAL------NHPAIVAV   72 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTT----EEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC------CCTTBCCE
T ss_pred             CCCCCEEEEEEEEEECCCEEEEEEEECCCC----CEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCCCCC
T ss_conf             570620698689960899299999999999----89999998556646989999999999999856------99988731


Q ss_pred             CCEEEECC----EEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC
Q ss_conf             40111268----389997621-1239999998166789999999999999999997421156231578899731258999
Q 002727          639 ASSFKYRN----HLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKN  713 (887)
Q Consensus       639 ~~~~~~~~----~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~  713 (887)
                      ++++...+    .+||||||+ +++|..++...+.   +++..++.|+.||+.||.|||++||||+||||+||||+. .+
T Consensus        73 ~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~---l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~-~~  148 (277)
T d1o6ya_          73 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-TN  148 (277)
T ss_dssp             EEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-TS
T ss_pred             CCEEEECCCCCCEEEEEEECCCCCEEHHHHCCCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CC
T ss_conf             14354326887669999977889871011203589---999999999999999999998579527634675566575-43


Q ss_pred             EEEEEECCCCEECCCC-----CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             0999822742005889-----86676557765552446089999435699999999999909999999991899999998
Q 002727          714 VLKLCDFGNAMFAGKN-----EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHME  788 (887)
Q Consensus       714 ~iKL~DFG~a~~~~~~-----~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~  788 (887)
                      .++|+|||.+......     .....+||+.|+|||++.+..|+.++||||||||||+|++|.+||.+.+..+.+..++.
T Consensus       149 ~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~  228 (277)
T d1o6ya_         149 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR  228 (277)
T ss_dssp             CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf             20100344432212354433334642576243699998399999663202652899999769799899699999999984


Q ss_pred             HHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             50999766530166666344333355667678246999999986159887454224899999565899999999803139
Q 002727          789 LKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLD  868 (887)
Q Consensus       789 ~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~D  868 (887)
                      ....+|...                                                    ++.++..+.+||.+||..|
T Consensus       229 ~~~~~~~~~----------------------------------------------------~~~~s~~l~~li~~~L~~d  256 (277)
T d1o6ya_         229 EDPIPPSAR----------------------------------------------------HEGLSADLDAVVLKALAKN  256 (277)
T ss_dssp             CCCCCGGGT----------------------------------------------------SSSCCHHHHHHHHHHTCSS
T ss_pred             CCCCCCCHH----------------------------------------------------CCCCCHHHHHHHHHHCCCC
T ss_conf             699997100----------------------------------------------------3478999999999986679


Q ss_pred             CCCCCCHHHHHHCCCC
Q ss_conf             8999699989847987
Q 002727          869 PEKRMTVAQALTHPFI  884 (887)
Q Consensus       869 P~~RpTa~eiL~HPwl  884 (887)
                      |.+||+..+.|.|+|+
T Consensus       257 p~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         257 PENRYQTAAEMRADLV  272 (277)
T ss_dssp             GGGSCSSHHHHHHHHH
T ss_pred             HHHCHHHHHHHHHHHH
T ss_conf             7677739999999999


No 39 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=364.46  Aligned_cols=258  Identities=23%  Similarity=0.370  Sum_probs=211.9

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-----HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCE
Q ss_conf             858899885137851899999767899998179999960560-----203777999999999609999999525686401
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE-----TMNKAGQTEVQILKKLAGADPENKRHCIRFASS  641 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~-----~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~  641 (887)
                      ++|.+++.||+|+||+||+|.+.... ..++.||||++.+..     .....+..|+.+|.+|.     +||||++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~-~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~-----h~pnIv~~~~~   97 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYA   97 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSST-TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-----TCTTBCCEEEE
T ss_pred             HCEEEEEEEECCCCEEEEEEEECCCC-CCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCC-----CCCEEEEEEEE
T ss_conf             02599989832878399999987658-8794899999836772101689999999999998646-----79839996200


Q ss_pred             EEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             11268389997621-12399999981667899999999999999999974211562315788997312589990999822
Q 002727          642 FKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDF  720 (887)
Q Consensus       642 ~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DF  720 (887)
                      |.....+++||||+ +++|..++.....   +++..+..++.||+.||.|||+++|||+||||+||||+. ++.+||+||
T Consensus        98 ~~~~~~~~~v~e~~~~~~L~~~i~~~~~---~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~vkL~DF  173 (322)
T d1vzoa_          98 FQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDF  173 (322)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEESCS
T ss_pred             ECCCCCEEEEEECCCCCHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECC-CCCEEEEEC
T ss_conf             0248730012312341179999873045---437888888999999998851499896547732012469-998887413


Q ss_pred             CCCEECCCC---CCCCCCCCCCCCCHHHHCCC--CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCH
Q ss_conf             742005889---86676557765552446089--9994356999999999999099999999918999999985099976
Q 002727          721 GNAMFAGKN---EITPYLVSRFYRAPEIILGL--PYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKGPFPK  795 (887)
Q Consensus       721 G~a~~~~~~---~~~~~~gt~~Y~APE~l~~~--~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g~~p~  795 (887)
                      |+|......   ......+++.|+|||++.+.  .++.++|||||||+||+|++|..||.+.+..+....+.......  
T Consensus       174 G~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~--  251 (322)
T d1vzoa_         174 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--  251 (322)
T ss_dssp             SEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC--
T ss_pred             CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC--
T ss_conf             202220344443221222333331068760577688713251777799999976899988887777999999833568--


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC--
Q ss_conf             653016666634433335566767824699999998615988745422489999956589999999980313989996--
Q 002727          796 KMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRM--  873 (887)
Q Consensus       796 ~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~Rp--  873 (887)
                                                                        .+..+..++..+.+||.+||.+||.+||  
T Consensus       252 --------------------------------------------------~~~~~~~~s~~~~~li~~~l~~dP~~R~s~  281 (322)
T d1vzoa_         252 --------------------------------------------------EPPYPQEMSALAKDLIQRLLMKDPKKRLGC  281 (322)
T ss_dssp             --------------------------------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             --------------------------------------------------CCCCCCCCCHHHHHHHHHHCCCCHHHCCCC
T ss_conf             --------------------------------------------------998865479999999999744589881999


Q ss_pred             ---CHHHHHHCCCCCC
Q ss_conf             ---9998984798779
Q 002727          874 ---TVAQALTHPFISG  886 (887)
Q Consensus       874 ---Ta~eiL~HPwl~~  886 (887)
                         ||+|||+||||.+
T Consensus       282 ~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         282 GPRDADEIKEHLFFQK  297 (322)
T ss_dssp             STTTHHHHHTSGGGTT
T ss_pred             CCCCHHHHHCCHHHCC
T ss_conf             7450999974972348


No 40 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=365.23  Aligned_cols=253  Identities=21%  Similarity=0.281  Sum_probs=209.7

Q ss_pred             EECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             43485889988513785189999976789999817999996056020377799999999960999999952568640111
Q 002727          564 ILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       564 il~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      +...+|.+++.||.|+||+||+|.+.. +    ..||||++.......+.+..|+.+|.+|      .||||+++++++.
T Consensus        10 i~~~~~~~~~~iG~G~fg~Vy~~~~~~-~----~~vAvK~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~~~g~~~   78 (272)
T d1qpca_          10 VPRETLKLVERLGAGQFGEVWMGYYNG-H----TKVAVKSLKQGSMSPDAFLAEANLMKQL------QHQRLVRLYAVVT   78 (272)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT-T----EEEEEEEECTTSSCHHHHHHHHHHHHHC------CCTTBCCEEEEEC
T ss_pred             CCHHHEEEEEEEECCCCCEEEEEEECC-C----CEEEEEEECCCCCCHHHHHHHHHHHHHC------CCCCEEEEEEEEC
T ss_conf             388993886798107982899999999-9----9999999864768889999999999867------9998857873104


Q ss_pred             ECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             268389997621-1239999998166789999999999999999997421156231578899731258999099982274
Q 002727          644 YRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGN  722 (887)
Q Consensus       644 ~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~  722 (887)
                      . +.+||||||+ +|+|.+++.... ...|++..+..|+.||+.||.|||+++|+|+||||+||||+. ++.+||+|||+
T Consensus        79 ~-~~~~iv~Ey~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~-~~~~Kl~DFGl  155 (272)
T d1qpca_          79 Q-EPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD-TLSCKIADFGL  155 (272)
T ss_dssp             S-SSCEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTT
T ss_pred             C-CCEEEEEEECCCCCHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEC-CCCEEECCCCC
T ss_conf             5-97699999578982888875147-898878899999999999999997489546756422515620-24404234101


Q ss_pred             CEECCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             20058898---6676557765552446089999435699999999999909-9999999918999999985099976653
Q 002727          723 AMFAGKNE---ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTG-KVLFPGATNNDMLRLHMELKGPFPKKML  798 (887)
Q Consensus       723 a~~~~~~~---~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG-~~PF~~~~~~~~l~~i~~~~g~~p~~~l  798 (887)
                      |.......   .....+++.|+|||++.+..|+.++|||||||+||+|+|| .+||......+.+..+.....       
T Consensus       156 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~-------  228 (272)
T d1qpca_         156 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-------  228 (272)
T ss_dssp             CEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-------
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC-------
T ss_conf             4773588644203567744445828983799982456452579999999689888888899999999970688-------


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             01666663443333556676782469999999861598874542248999995658999999998031398999699989
Q 002727          799 RKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQA  878 (887)
Q Consensus       799 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~ei  878 (887)
                                                                      +..+..++..+.+||.+||..||.+|||+.++
T Consensus       229 ------------------------------------------------~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei  260 (272)
T d1qpca_         229 ------------------------------------------------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL  260 (272)
T ss_dssp             ------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ------------------------------------------------CCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             ------------------------------------------------88965571999999999758897689399999


Q ss_pred             HH--CCCCC
Q ss_conf             84--79877
Q 002727          879 LT--HPFIS  885 (887)
Q Consensus       879 L~--HPwl~  885 (887)
                      ++  |+||+
T Consensus       261 ~~~L~~~ft  269 (272)
T d1qpca_         261 RSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             998611321


No 41 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=0  Score=360.50  Aligned_cols=253  Identities=19%  Similarity=0.255  Sum_probs=208.9

Q ss_pred             EECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCE
Q ss_conf             43485889988513785189999976789999817999996056--0203777999999999609999999525686401
Q 002727          564 ILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFASS  641 (887)
Q Consensus       564 il~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~  641 (887)
                      +....|.+.+.||+|+||+||+|.+..++. ....||||++...  ......+.+|+.+|.+|      +||||++++++
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~g~   95 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGK-REIFVAIKTLKSGYTEKQRRDFLSEASIMGQF------DHPNVIHLEGV   95 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC----CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC------CCTTBCCEEEE
T ss_pred             HCHHHCEEEEEEEECCCEEEEEEEEECCCC-EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCCCCEEEE
T ss_conf             080042785698027882999999957997-88999999978445989999999999999857------99888618999


Q ss_pred             EEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             11268389997621-12399999981667899999999999999999974211562315788997312589990999822
Q 002727          642 FKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDF  720 (887)
Q Consensus       642 ~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DF  720 (887)
                      |...+.+||||||+ +|+|.+++....  ..+++..+..|+.||+.||.|||+++|||+||||+||||+. ++.+||+||
T Consensus        96 ~~~~~~~~iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DF  172 (299)
T d1jpaa_          96 VTKSTPVMIITEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS-NLVCKVSDF  172 (299)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC
T ss_pred             EEECCEEEEEEEECCCCCCEEEECCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC-CCCEEECCC
T ss_conf             962887799997227985300210456--79999999999999999889885279835761504489889-991998884


Q ss_pred             CCCEECCCCC-------CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             7420058898-------667655776555244608999943569999999999990-99999999918999999985099
Q 002727          721 GNAMFAGKNE-------ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGP  792 (887)
Q Consensus       721 G~a~~~~~~~-------~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~  792 (887)
                      |+|.......       .....+|+.|+|||++.+..|+.++||||||||||||+| |.+||.+.+..+.+..+......
T Consensus       173 Gla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~  252 (299)
T d1jpaa_         173 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL  252 (299)
T ss_dssp             -----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC
T ss_pred             CCCEECCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             43157567777653650256668830038788836997861214453578999986799999999999999999737889


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             97665301666663443333556676782469999999861598874542248999995658999999998031398999
Q 002727          793 FPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKR  872 (887)
Q Consensus       793 ~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~R  872 (887)
                                                                             ..+..++..+.+||.+||..||.+|
T Consensus       253 -------------------------------------------------------~~~~~~~~~l~~li~~cl~~~P~~R  277 (299)
T d1jpaa_         253 -------------------------------------------------------PPPMDCPSALHQLMLDCWQKDRNHR  277 (299)
T ss_dssp             -------------------------------------------------------CCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             -------------------------------------------------------CCCCCCHHHHHHHHHHHCCCCHHHC
T ss_conf             -------------------------------------------------------9974226999999999758797689


Q ss_pred             CCHHHHHHC
Q ss_conf             699989847
Q 002727          873 MTVAQALTH  881 (887)
Q Consensus       873 pTa~eiL~H  881 (887)
                      ||+.|||++
T Consensus       278 Ps~~ei~~~  286 (299)
T d1jpaa_         278 PKFGQIVNT  286 (299)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
T ss_conf             299999999


No 42 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=358.60  Aligned_cols=246  Identities=21%  Similarity=0.327  Sum_probs=209.6

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECC
Q ss_conf             85889988513785189999976789999817999996056020377799999999960999999952568640111268
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYRN  646 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~~  646 (887)
                      .+|.+++.||+|+||+||+|.+...     ..||||++.........+..|+.++..|      +||||++++++|...+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~-----~~vAvK~i~~~~~~~~~~~~E~~~l~~l------~HpnIv~~~g~~~~~~   73 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNK-----DKVAIKTIREGAMSEEDFIEEAEVMMKL------SHPKLVQLYGVCLEQA   73 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTT-----EEEEEEECCSSSSCHHHHHHHHHHHHHC------CCTTBCCEEEEECSSS
T ss_pred             HHCEEEEEEEECCCEEEEEEEECCC-----CEEEEEEECCCCCCHHHHHHHHHHHHHC------CCCCCCCCCCEECCCC
T ss_conf             9958888982088829999998899-----9999999878867689999999999966------8997565352431599


Q ss_pred             EEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             389997621-1239999998166789999999999999999997421156231578899731258999099982274200
Q 002727          647 HLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMF  725 (887)
Q Consensus       647 ~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~  725 (887)
                      .+||||||+ +|+|.+++....  ..+++..+..|+.||+.||.|||+++|+|+||||+||||+. ++.+||+|||++..
T Consensus        74 ~~~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGla~~  150 (263)
T d1sm2a_          74 PICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE-NQVIKVSDFGMTRF  150 (263)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG-GGCEEECSCC----
T ss_pred             CEEEEEEECCCCCHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECC-CCCEEECCCCHHEE
T ss_conf             3379998369991899752013--47889999999999999877653164310443153266668-87768655321002


Q ss_pred             CCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             58898---667655776555244608999943569999999999990-99999999918999999985099976653016
Q 002727          726 AGKNE---ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       726 ~~~~~---~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      .....   .....+|+.|+|||++.+..|+.++|||||||+||+|+| |.+||.+.+..+.+..+.......        
T Consensus       151 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~--------  222 (263)
T d1sm2a_         151 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY--------  222 (263)
T ss_dssp             --------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC--------
T ss_pred             CCCCCCEEECCEECCCCCCCHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC--------
T ss_conf             368873350430017666785786079998403321059999999878988877899999999998068889--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             66663443333556676782469999999861598874542248999995658999999998031398999699989847
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                                                                     .+..++..+.+||.+||..||.+|||+.+||+|
T Consensus       223 -----------------------------------------------~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         223 -----------------------------------------------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             -----------------------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------------------------------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf             -----------------------------------------------954367999999999765797689199999999


No 43 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=358.73  Aligned_cols=252  Identities=19%  Similarity=0.265  Sum_probs=207.7

Q ss_pred             CCEEEEEE-ECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             85889988-513785189999976789999817999996056--020377799999999960999999952568640111
Q 002727          567 GRYEVTAA-HGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       567 ~rY~i~~~-LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      .+|.+... ||.|+||+||+|.+...+  ....||||++...  ......+.+|+.+|.+|      +||||++++++|.
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~--~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~g~~~   79 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRK--KQIDVAIKVLKQGTEKADTEEMMREAQIMHQL------DNPYIVRLIGVCQ   79 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC-----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC------CCTTBCCEEEEEE
T ss_pred             CCEEECCCEEECCCCEEEEEEEEECCC--CCEEEEEEEECHHCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEEEC
T ss_conf             471887848730608099999996089--76899999988203978999999999999867------9988806865603


Q ss_pred             ECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             268389997621-1239999998166789999999999999999997421156231578899731258999099982274
Q 002727          644 YRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGN  722 (887)
Q Consensus       644 ~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~  722 (887)
                      . +.+||||||+ +|+|.+++...  ...+++..+..|+.||+.||.|||+++|||+||||+||||+. ++.+||+|||+
T Consensus        80 ~-~~~~lvmE~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGl  155 (285)
T d1u59a_          80 A-EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN-RHYAKISDFGL  155 (285)
T ss_dssp             S-SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE-TTEEEECCCTT
T ss_pred             C-CEEEEEEEECCCCCHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECC-CCCEEECCCHH
T ss_conf             6-8079999807899689975212--569999999999999999878998688105767646604546-88542033134


Q ss_pred             CEECCCCC-----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             20058898-----667655776555244608999943569999999999990-999999999189999999850999766
Q 002727          723 AMFAGKNE-----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPKK  796 (887)
Q Consensus       723 a~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~~  796 (887)
                      |.......     .....+|+.|+|||++.+..|+.++|||||||+||||+| |..||.+.+..+.+..+.....     
T Consensus       156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~-----  230 (285)
T d1u59a_         156 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-----  230 (285)
T ss_dssp             CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC-----
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC-----
T ss_conf             211554343211356211374335868872799995412322017899999389999999799999999981899-----


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf             53016666634433335566767824699999998615988745422489999956589999999980313989996999
Q 002727          797 MLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVA  876 (887)
Q Consensus       797 ~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~  876 (887)
                                                                        +..++.++..+.+||.+||..+|.+|||+.
T Consensus       231 --------------------------------------------------~~~p~~~~~~l~~li~~cl~~~p~~RPs~~  260 (285)
T d1u59a_         231 --------------------------------------------------MECPPECPPELYALMSDCWIYKWEDRPDFL  260 (285)
T ss_dssp             --------------------------------------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             --------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHH
T ss_conf             --------------------------------------------------999976789999999997577976890999


Q ss_pred             HH---HHCCCCC
Q ss_conf             89---8479877
Q 002727          877 QA---LTHPFIS  885 (887)
Q Consensus       877 ei---L~HPwl~  885 (887)
                      +|   |+|+|++
T Consensus       261 ~i~~~L~~~~~~  272 (285)
T d1u59a_         261 TVEQRMRACYYS  272 (285)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999998


No 44 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=359.92  Aligned_cols=253  Identities=24%  Similarity=0.319  Sum_probs=205.5

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC---CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             243485889988513785189999976789999817999996056---02037779999999996099999995256864
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN---ETMNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      ++-.++|.+++.||+|+||+||+|...       ..||||++...   ......+..|+.+|..|      +||||++++
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~~~   70 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWH-------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT------RHVNILLFM   70 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESS-------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC------CCTTBCCEE
T ss_pred             CCCCCCEEEEEEEEECCCCEEEEEEEC-------CEEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCEEEEE
T ss_conf             315451899889830788589999999-------9899999973469989999999999999847------998786456


Q ss_pred             CEEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf             0111268389997621-123999999816678999999999999999999742115623157889973125899909998
Q 002727          640 SSFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLC  718 (887)
Q Consensus       640 ~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~  718 (887)
                      +++.. ..+||||||+ +|+|.++|....  ..+++..+..|+.||+.||.|||+++|||+||||+||||+. ++.+||+
T Consensus        71 ~~~~~-~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~-~~~~Kl~  146 (276)
T d1uwha_          71 GYSTA-PQLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE-DLTVKIG  146 (276)
T ss_dssp             EEECS-SSCEEEEECCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET-TSSEEEC
T ss_pred             EEEEC-CEEEEEEECCCCCCHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECC-CCCEEEC
T ss_conf             79715-58999996589988899985235--78999999999999999988875099951614789979818-9978875


Q ss_pred             ECCCCEECCCC----CCCCCCCCCCCCCHHHHCCC---CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             22742005889----86676557765552446089---999435699999999999909999999991899999998509
Q 002727          719 DFGNAMFAGKN----EITPYLVSRFYRAPEIILGL---PYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKG  791 (887)
Q Consensus       719 DFG~a~~~~~~----~~~~~~gt~~Y~APE~l~~~---~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g  791 (887)
                      |||+|......    ......||+.|+|||++.+.   +|+.++|||||||+||+|+||..||.+.+....+..++....
T Consensus       147 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~  226 (276)
T d1uwha_         147 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY  226 (276)
T ss_dssp             CCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTS
T ss_pred             CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
T ss_conf             00221333556776312566557431799999505689999531516359999999978899899896999999996588


Q ss_pred             CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99766530166666344333355667678246999999986159887454224899999565899999999803139899
Q 002727          792 PFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEK  871 (887)
Q Consensus       792 ~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~  871 (887)
                      ..|..                                                  ...+..++..+.+||.+||..||.+
T Consensus       227 ~~p~~--------------------------------------------------~~~~~~~~~~l~~li~~cl~~dp~~  256 (276)
T d1uwha_         227 LSPDL--------------------------------------------------SKVRSNCPKAMKRLMAECLKKKRDE  256 (276)
T ss_dssp             CCCCG--------------------------------------------------GGSCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CCCCC--------------------------------------------------HHCCCCCHHHHHHHHHHHCCCCHHH
T ss_conf             89860--------------------------------------------------0036555499999999975889768


Q ss_pred             CCCHHHHHHCC
Q ss_conf             96999898479
Q 002727          872 RMTVAQALTHP  882 (887)
Q Consensus       872 RpTa~eiL~HP  882 (887)
                      |||+.+||++-
T Consensus       257 RPt~~~il~~L  267 (276)
T d1uwha_         257 RPLFPQILASI  267 (276)
T ss_dssp             SCCHHHHHHHH
T ss_pred             CCCHHHHHHHH
T ss_conf             92999999999


No 45 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=353.78  Aligned_cols=251  Identities=21%  Similarity=0.289  Sum_probs=207.3

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             85889988513785189999976789999817999996056--0203777999999999609999999525686401112
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      ..|.+++.||.|+||+||+|.+..++......||+|.+...  ......+..|+.+|..|      +||||++++++|..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~g~~~~   82 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DNPHVCRLLGICLT   82 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHC------CCTTBCCEEEEEES
T ss_pred             HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEEEEC
T ss_conf             999783198208992999999958998898999999965134979999999999999867------99888158999961


Q ss_pred             CCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             68389997621-12399999981667899999999999999999974211562315788997312589990999822742
Q 002727          645 RNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNA  723 (887)
Q Consensus       645 ~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a  723 (887)
                      .+ .++|++++ +++|.+++....  ..+++..++.|+.||+.||.|||+++|||+||||+||||+. ++.+||+|||+|
T Consensus        83 ~~-~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~-~~~~kl~DFGla  158 (317)
T d1xkka_          83 ST-VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-PQHVKITDFGLA  158 (317)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-TTEEEECCCSHH
T ss_pred             CC-EEEEEEECCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECC-CCCEEEECCCCC
T ss_conf             98-369998426874010111334--57999999999999999999998769504762120311679-987586025522


Q ss_pred             EECCCCC----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             0058898----667655776555244608999943569999999999990-99999999918999999985099976653
Q 002727          724 MFAGKNE----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPKKML  798 (887)
Q Consensus       724 ~~~~~~~----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~~~l  798 (887)
                      .......    .....||+.|+|||++.+..|+.++|||||||+||+|+| |.+||.+.+..+....+.....       
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~-------  231 (317)
T d1xkka_         159 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-------  231 (317)
T ss_dssp             HHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCC-------
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC-------
T ss_conf             2335444532236510586446708874699983565440799999999779999999998999999975998-------


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             01666663443333556676782469999999861598874542248999995658999999998031398999699989
Q 002727          799 RKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQA  878 (887)
Q Consensus       799 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~ei  878 (887)
                                                                      +..++.++..+.+||.+||..||.+|||+.+|
T Consensus       232 ------------------------------------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei  263 (317)
T d1xkka_         232 ------------------------------------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFREL  263 (317)
T ss_dssp             ------------------------------------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf             ------------------------------------------------99985568999999998478993469199999


Q ss_pred             HHCC
Q ss_conf             8479
Q 002727          879 LTHP  882 (887)
Q Consensus       879 L~HP  882 (887)
                      |.|.
T Consensus       264 l~~l  267 (317)
T d1xkka_         264 IIEF  267 (317)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 46 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=356.06  Aligned_cols=244  Identities=21%  Similarity=0.295  Sum_probs=201.5

Q ss_pred             EEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC---CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCEEE
Q ss_conf             88513785189999976789999817999996056---020377799999999960999999952568640111268389
Q 002727          573 AAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN---ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYRNHLC  649 (887)
Q Consensus       573 ~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~~~l~  649 (887)
                      ++||+|+||+||+|.+....  ....||||++...   ......+..|+.+|.+|      +||||++++++|.. +.+|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~~~g~~~~-~~~~   83 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKK--VVKTVAVKILKNEANDPALKDELLAEANVMQQL------DNPYIVRMIGICEA-ESWM   83 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSS--SEEEEEEEEEC-----CHHHHHHHHHHHHHHTC------CCTTBCCEEEEEES-SSEE
T ss_pred             CCCCCCCCEEEEEEEECCCC--CCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHC------CCCCCCEEEEEECC-CCEE
T ss_conf             78345878299999981697--385999999880108989999999999999867------99898527777505-9779


Q ss_pred             EEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCEECCC
Q ss_conf             997621-1239999998166789999999999999999997421156231578899731258999099982274200588
Q 002727          650 LVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGK  728 (887)
Q Consensus       650 lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~~~~  728 (887)
                      |||||+ +|+|.+++....   .+++..+..|+.||+.||.|||+++|||+||||+||||+. .+.+||+|||+|.....
T Consensus        84 lvmE~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~-~~~~kl~DFGla~~~~~  159 (277)
T d1xbba_          84 LVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRA  159 (277)
T ss_dssp             EEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-TTEEEECCCTTCEECCT
T ss_pred             EEEECCCCCCHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC-CCCCCCCCHHHHHHCCC
T ss_conf             9997478896899975225---7899999999999999976687479556777611310235-67512341345331343


Q ss_pred             CC-----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf             98-----667655776555244608999943569999999999990-999999999189999999850999766530166
Q 002727          729 NE-----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPKKMLRKGA  802 (887)
Q Consensus       729 ~~-----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~~  802 (887)
                      ..     .....+|+.|+|||++.+..|+.++|||||||+||+|++ |.+||.+.+..+.+..+.....           
T Consensus       160 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~-----------  228 (277)
T d1xbba_         160 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER-----------  228 (277)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-----------
T ss_pred             CCCCCCCCCCCCCCCEECCCHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC-----------
T ss_conf             234432244567784203916653799984344303403132896589999999899999999982899-----------


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH---H
Q ss_conf             6663443333556676782469999999861598874542248999995658999999998031398999699989---8
Q 002727          803 FTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQA---L  879 (887)
Q Consensus       803 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~ei---L  879 (887)
                                                                  +..+..++..+.+||.+||..||.+|||+.+|   |
T Consensus       229 --------------------------------------------~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L  264 (277)
T d1xbba_         229 --------------------------------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL  264 (277)
T ss_dssp             --------------------------------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             --------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf             --------------------------------------------999865679999999997588976890989999985


Q ss_pred             HCCCC
Q ss_conf             47987
Q 002727          880 THPFI  884 (887)
Q Consensus       880 ~HPwl  884 (887)
                      +|+|+
T Consensus       265 ~~~~~  269 (277)
T d1xbba_         265 RNYYY  269 (277)
T ss_dssp             HHHHH
T ss_pred             HCHHH
T ss_conf             28875


No 47 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=355.60  Aligned_cols=246  Identities=19%  Similarity=0.285  Sum_probs=211.7

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECC
Q ss_conf             85889988513785189999976789999817999996056020377799999999960999999952568640111268
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYRN  646 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~~  646 (887)
                      .+|.++++||+|+||+||+|... ++    ..||||++++.......+.+|+.++..+      +||||++++++|...+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~----~~vAvK~l~~~~~~~~~~~~Ev~~~~~l------~HpnIv~~~g~~~~~~   72 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQ----YDVAIKMIKEGSMSEDEFIEEAKVMMNL------SHEKLVQLYGVCTKQR   72 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TT----EEEEEEEEESSSSCHHHHHHHHHHHHTC------CCTTBCCEEEEECCSS
T ss_pred             HHCEEEEEEECCCCEEEEEEEEC-CC----CEEEEEEECCCCCCHHHHHHHHHHHHHC------CCCCEEEEEEEEEECC
T ss_conf             99799689820788399999988-99----8999999874757789999999999966------8986015889985078


Q ss_pred             EEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             389997621-1239999998166789999999999999999997421156231578899731258999099982274200
Q 002727          647 HLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMF  725 (887)
Q Consensus       647 ~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~  725 (887)
                      .+++||||+ +|+|..++....  ..+++..+..|+.||+.||.|||++||+|+||||+||||+. ++.+||+|||++..
T Consensus        73 ~~~iv~Ey~~~g~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~-~~~~kl~DfG~a~~  149 (258)
T d1k2pa_          73 PIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRY  149 (258)
T ss_dssp             SEEEEEECCTTEEHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT-TCCEEECCCSSCCB
T ss_pred             CEEEEEECCCCCCHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC-CCCEEECCCHHHEE
T ss_conf             1699997048993888641024--67768999999999999999875468434665413588769-98479886144202


Q ss_pred             CCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             58898---667655776555244608999943569999999999990-99999999918999999985099976653016
Q 002727          726 AGKNE---ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPKKMLRKG  801 (887)
Q Consensus       726 ~~~~~---~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~~  801 (887)
                      .....   .....+++.|+|||++.+..|+.++|||||||++|+|+| |..||.+.+..++...+......+        
T Consensus       150 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~--------  221 (258)
T d1k2pa_         150 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY--------  221 (258)
T ss_dssp             CSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC--------
T ss_pred             CCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC--------
T ss_conf             357872252465788775780786379988521033643246739755999988999999999998079789--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             66663443333556676782469999999861598874542248999995658999999998031398999699989847
Q 002727          802 AFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       802 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~H  881 (887)
                                                                     .+..++..+.+||.+||+.||.+|||+.+||+|
T Consensus       222 -----------------------------------------------~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         222 -----------------------------------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             -----------------------------------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------------------------------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf             -----------------------------------------------965465999999999766897689399999987


No 48 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=353.75  Aligned_cols=252  Identities=24%  Similarity=0.300  Sum_probs=209.5

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEC
Q ss_conf             48588998851378518999997678999981799999605602037779999999996099999995256864011126
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYR  645 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~  645 (887)
                      .++|.+.+.||+|+||+||+|.+..+     ..||||++.......+.+..|+.+|.+|      +|+||++++++|.. 
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-----~~vAiK~l~~~~~~~~~~~~E~~~l~~l------~h~nIv~~~g~~~~-   83 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKTLKPGTMSPEAFLQEAQVMKKL------RHEKLVQLYAVVSE-   83 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-----EEEEEEECCTTSSCHHHHHHHHHHHHHC------CCTTBCCEEEEECS-
T ss_pred             HHHEEEEEEEEECCCEEEEEEEECCC-----CEEEEEEECCCCCCHHHHHHHHHHHHHC------CCCCEEEEEEEEEC-
T ss_conf             79979846993079809999999999-----9999999880448889999999999866------66788689999823-


Q ss_pred             CEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf             8389997621-123999999816678999999999999999999742115623157889973125899909998227420
Q 002727          646 NHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAM  724 (887)
Q Consensus       646 ~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~  724 (887)
                      +.++|||||+ +|+|..++.... ...+++..+..|+.||+.||.|||+++|+|+||||+||||+. ++.+||+|||+|.
T Consensus        84 ~~~~lv~Ey~~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~-~~~~kl~DfGla~  161 (285)
T d1fmka3          84 EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLAR  161 (285)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCTTC
T ss_pred             CCEEEEEEECCCCCHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECC-CCCEEECCCCHHH
T ss_conf             97599999447994354200003-553059999999999999999875411433531230799989-9929984425554


Q ss_pred             ECCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf             058898---6676557765552446089999435699999999999909-999999991899999998509997665301
Q 002727          725 FAGKNE---ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTG-KVLFPGATNNDMLRLHMELKGPFPKKMLRK  800 (887)
Q Consensus       725 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG-~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~  800 (887)
                      ......   .....+++.|+|||++.+..++.++||||||||||+|++| .+||.+....+.+..+.....         
T Consensus       162 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~---------  232 (285)
T d1fmka3         162 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---------  232 (285)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---------
T ss_pred             HCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC---------
T ss_conf             25688733524545566545808983799891774132358999998689999988889999999982689---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             66666344333355667678246999999986159887454224899999565899999999803139899969998984
Q 002727          801 GAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       801 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~  880 (887)
                                                                    +..++.++..+.+||.+||..||.+|||+.+++.
T Consensus       233 ----------------------------------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  266 (285)
T d1fmka3         233 ----------------------------------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  266 (285)
T ss_dssp             ----------------------------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf             ----------------------------------------------9998323799999999975669758919999999


Q ss_pred             --CCCCCC
Q ss_conf             --798779
Q 002727          881 --HPFISG  886 (887)
Q Consensus       881 --HPwl~~  886 (887)
                        ++||+.
T Consensus       267 ~L~~~~~~  274 (285)
T d1fmka3         267 FLEDYFTS  274 (285)
T ss_dssp             HHHTTTSC
T ss_pred             HHHHHHCC
T ss_conf             87666238


No 49 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=351.83  Aligned_cols=253  Identities=24%  Similarity=0.360  Sum_probs=209.4

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             243485889988513785189999976789999817999996056--020377799999999960999999952568640
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFAS  640 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~  640 (887)
                      ++..++|.+++.||.|+||+||+|.+..++ .....||||++...  ......+..|+.+|..|      +||||+++++
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~-~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~~   75 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPE-NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF------DHPHIVKLIG   75 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC---CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC------CCTTBCCEEE
T ss_pred             CCCHHHEEEEEEEEECCCCEEEEEEEECCC-CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEE
T ss_conf             768899698779930788299999993699-644999999936566879999999999999868------9999856988


Q ss_pred             EEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             111268389997621-1239999998166789999999999999999997421156231578899731258999099982
Q 002727          641 SFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCD  719 (887)
Q Consensus       641 ~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~D  719 (887)
                      +|. .+.+||||||+ +|+|..++....  ..+++..++.++.||+.||.|||+++|||+||||+|||++. .+.+||+|
T Consensus        76 ~~~-~~~~~iv~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~-~~~~Kl~D  151 (273)
T d1mp8a_          76 VIT-ENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGD  151 (273)
T ss_dssp             EEC-SSSCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECC
T ss_pred             EEE-CCEEEEEEEECCCCCHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECC-CCCEEECC
T ss_conf             995-374799998406980776542247--89999999999999987752302267441410265532067-89678765


Q ss_pred             CCCCEECCCCC---CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCH
Q ss_conf             27420058898---667655776555244608999943569999999999990-99999999918999999985099976
Q 002727          720 FGNAMFAGKNE---ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPK  795 (887)
Q Consensus       720 FG~a~~~~~~~---~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~  795 (887)
                      ||+|.......   .+...+|+.|+|||++.+..|+.++|||||||+||+|++ |.+||.+.+..+.+..+.....    
T Consensus       152 fG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~----  227 (273)
T d1mp8a_         152 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER----  227 (273)
T ss_dssp             -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC----
T ss_pred             CHHHEECCCCCCEECCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC----
T ss_conf             0342133677623305400583103266751699887452444247899998269999888999999999981899----


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf             65301666663443333556676782469999999861598874542248999995658999999998031398999699
Q 002727          796 KMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTV  875 (887)
Q Consensus       796 ~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa  875 (887)
                                                                         +..++.++..+.+||.+||..||.+|||+
T Consensus       228 ---------------------------------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rps~  256 (273)
T d1mp8a_         228 ---------------------------------------------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRF  256 (273)
T ss_dssp             ---------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             ---------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCH
T ss_conf             ---------------------------------------------------98987779999999999768797689299


Q ss_pred             HHHHHC
Q ss_conf             989847
Q 002727          876 AQALTH  881 (887)
Q Consensus       876 ~eiL~H  881 (887)
                      .+|++|
T Consensus       257 ~ei~~~  262 (273)
T d1mp8a_         257 TELKAQ  262 (273)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999999


No 50 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=346.58  Aligned_cols=254  Identities=18%  Similarity=0.228  Sum_probs=204.9

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             243485889988513785189999976789999817999996056--020377799999999960999999952568640
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFAS  640 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~  640 (887)
                      |+-...|.+.++||+|+||+||+|....++......||||++...  ......+..|+.+|..|      +||||+++++
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l------~H~nIv~~~g   76 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF------SHHNIIRLEG   76 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC------CCTTBCCEEE
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEE
T ss_conf             5788996861598117790999999968998787999999988445968999999999999856------8987832367


Q ss_pred             EEEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             111268389997621-1239999998166789999999999999999997421156231578899731258999099982
Q 002727          641 SFKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCD  719 (887)
Q Consensus       641 ~~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~D  719 (887)
                      +|.....+++||||+ ++.|.+++....  ..+++..+..|+.||+.||.|||+++|||+||||+||||+. ++.+||+|
T Consensus        77 ~~~~~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~-~~~~Kl~D  153 (283)
T d1mqba_          77 VISKYKPMMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS-NLVCKVSD  153 (283)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECC
T ss_pred             EEECCCCEEEEEEECCCCCCHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC-CCEEEECC
T ss_conf             7833880389997213574022210234--54208999999999998541212123425765644278889-98499845


Q ss_pred             CCCCEECCCCC-----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             27420058898-----66765577655524460899994356999999999999099-9999999189999999850999
Q 002727          720 FGNAMFAGKNE-----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGK-VLFPGATNNDMLRLHMELKGPF  793 (887)
Q Consensus       720 FG~a~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~-~PF~~~~~~~~l~~i~~~~g~~  793 (887)
                      ||+|.......     .....||+.|+|||++.+..|+.++|||||||+||+|+++. +||.+.+..+.+..+.....  
T Consensus       154 FGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~--  231 (283)
T d1mqba_         154 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR--  231 (283)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--
T ss_pred             CCHHHCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC--
T ss_conf             510300357876526742677773434888870499997355634489899999679886556899999999863578--


Q ss_pred             CHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             76653016666634433335566767824699999998615988745422489999956589999999980313989996
Q 002727          794 PKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRM  873 (887)
Q Consensus       794 p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~Rp  873 (887)
                                                                           +..+..++..+.+||.+||..+|.+||
T Consensus       232 -----------------------------------------------------~~~~~~~~~~l~~li~~cl~~~p~~RP  258 (283)
T d1mqba_         232 -----------------------------------------------------LPTPMDCPSAIYQLMMQCWQQERARRP  258 (283)
T ss_dssp             -----------------------------------------------------CCCCTTCBHHHHHHHHHHTCSSTTTSC
T ss_pred             -----------------------------------------------------CCCCHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf             -----------------------------------------------------998504579999999997767976893


Q ss_pred             CHHHHHH
Q ss_conf             9998984
Q 002727          874 TVAQALT  880 (887)
Q Consensus       874 Ta~eiL~  880 (887)
                      |+.+||+
T Consensus       259 t~~eil~  265 (283)
T d1mqba_         259 KFADIVS  265 (283)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
T ss_conf             9999999


No 51 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=348.13  Aligned_cols=259  Identities=22%  Similarity=0.337  Sum_probs=207.0

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCC-CCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2434858899885137851899999767899-99817999996056--02037779999999996099999995256864
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGN-GEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~-~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      ++..++|.+++.||.|+||.||+|.+...+. .....||||++...  ......+..|+.++.++.     +|++|+.++
T Consensus         9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~   83 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLL   83 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC-----CCTTBCCEE
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC-----CCCEEEEEE
T ss_conf             616799798449841678399999986777555783999999860017178999999999988614-----998499741


Q ss_pred             CEEEE-CCEEEEEEECC-HHHHHHHHHHHCC-------------CCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
Q ss_conf             01112-68389997621-1239999998166-------------789999999999999999997421156231578899
Q 002727          640 SSFKY-RNHLCLVFESL-HMNLREVLKKFGR-------------NIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPD  704 (887)
Q Consensus       640 ~~~~~-~~~l~lV~E~~-~gsL~~lL~~~~~-------------~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~  704 (887)
                      +++.. ...+++||||+ +|+|.++|.....             ...|++..+..|+.||+.||.|||+++|||+||||+
T Consensus        84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~  163 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  163 (299)
T ss_dssp             EEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             EEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             15404797579999845899299999853666665322202332146899999999999999999887379717867731


Q ss_pred             CCCCCCCCCEEEEEECCCCEECCCC----CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCCH
Q ss_conf             7312589990999822742005889----86676557765552446089999435699999999999909-999999991
Q 002727          705 NMLVNEAKNVLKLCDFGNAMFAGKN----EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTG-KVLFPGATN  779 (887)
Q Consensus       705 NILi~~~~~~iKL~DFG~a~~~~~~----~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG-~~PF~~~~~  779 (887)
                      ||||+. ++.+||+|||+|......    ......||+.|+|||++.+..|+.++|||||||+||+|++| .+||.+...
T Consensus       164 NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~  242 (299)
T d1ywna1         164 NILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  242 (299)
T ss_dssp             GEEECG-GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             CEEECC-CCCEEECCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCH
T ss_conf             065779-9828984575200113566522247516672102036864688996632213678999998688999989998


Q ss_pred             HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             89999999850999766530166666344333355667678246999999986159887454224899999565899999
Q 002727          780 NDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKD  859 (887)
Q Consensus       780 ~~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~d  859 (887)
                      ...+..++.....+                                                      ..+..++..+.+
T Consensus       243 ~~~~~~~~~~~~~~------------------------------------------------------~~~~~~~~~l~~  268 (299)
T d1ywna1         243 DEEFCRRLKEGTRM------------------------------------------------------RAPDYTTPEMYQ  268 (299)
T ss_dssp             SHHHHHHHHHTCCC------------------------------------------------------CCCTTCCHHHHH
T ss_pred             HHHHHHHHHCCCCC------------------------------------------------------CCCCCCCHHHHH
T ss_conf             99999999638988------------------------------------------------------888657899999


Q ss_pred             HHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             9998031398999699989847
Q 002727          860 LLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       860 LL~kmL~~DP~~RpTa~eiL~H  881 (887)
                      ||.+||..||.+|||+.|||+|
T Consensus       269 li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         269 TMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHCCCCHHHCCCHHHHHHH
T ss_conf             9999767796679199999999


No 52 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=340.39  Aligned_cols=258  Identities=20%  Similarity=0.225  Sum_probs=205.9

Q ss_pred             ECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             34858899885137851899999767899998179999960560203777999999999609999999525686401112
Q 002727          565 LDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       565 l~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      +.++|.+++.||.|+||+||+|.+..++    +.||||++.... ....+..|+.++..+.     +|++|+.+..++..
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~----~~vAvK~~~~~~-~~~~~~~E~~i~~~l~-----~~~~i~~~~~~~~~   74 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAG----EEVAIKLECVKT-KHPQLHIESKIYKMMQ-----GGVGIPTIRWCGAE   74 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTT----EEEEEEEEESCT-TSCCHHHHHHHHHHST-----TSTTCCCEEEEEEE
T ss_pred             ECCEEEEEEEEEECCCCEEEEEEECCCC----CEEEEEEECHHC-CCHHHHHHHHHHHHCC-----CCCCCCEEEEEEEC
T ss_conf             8888999689850788099999998899----899999972100-5888999999999703-----89960179999951


Q ss_pred             CCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC--CCCEEEEEECCC
Q ss_conf             683899976211239999998166789999999999999999997421156231578899731258--999099982274
Q 002727          645 RNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNE--AKNVLKLCDFGN  722 (887)
Q Consensus       645 ~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~--~~~~iKL~DFG~  722 (887)
                      .+.+++|||+++++|...+....  ..+++..+..++.||+.||.|||++||||+||||+|||++.  ....++|+|||+
T Consensus        75 ~~~~~ivme~~~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~  152 (299)
T d1ckia_          75 GDYNVMVMELLGPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  152 (299)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSS
T ss_pred             CCEEEEEEEECCCCHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCC
T ss_conf             98778999873871333244306--8876899999999999999999979944266787660643357776156504675


Q ss_pred             CEECCCCC---------CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC--
Q ss_conf             20058898---------6676557765552446089999435699999999999909999999991899999998509--
Q 002727          723 AMFAGKNE---------ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNNDMLRLHMELKG--  791 (887)
Q Consensus       723 a~~~~~~~---------~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~~l~~i~~~~g--  791 (887)
                      |.......         ....+||+.|+|||++.+..|+.++|||||||+||+|++|..||...........+.....  
T Consensus       153 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~  232 (299)
T d1ckia_         153 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  232 (299)
T ss_dssp             CEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHH
T ss_pred             CEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             13425544554100013577678735329999918998983218861778999984987665530577999999852356


Q ss_pred             -CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             -9976653016666634433335566767824699999998615988745422489999956589999999980313989
Q 002727          792 -PFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPE  870 (887)
Q Consensus       792 -~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~  870 (887)
                       .+|..-                                                   ..+.++..+.+||.+||..+|.
T Consensus       233 ~~~~~~~---------------------------------------------------~~~~~p~~~~~li~~cl~~~p~  261 (299)
T d1ckia_         233 MSTPIEV---------------------------------------------------LCKGYPSEFATYLNFCRSLRFD  261 (299)
T ss_dssp             HHSCHHH---------------------------------------------------HTTTSCHHHHHHHHHHHHSCTT
T ss_pred             CCCCHHH---------------------------------------------------HCCCCCHHHHHHHHHHCCCCHH
T ss_conf             7898357---------------------------------------------------5347889999999998439955


Q ss_pred             CCCCHH---HHHHCCCCC
Q ss_conf             996999---898479877
Q 002727          871 KRMTVA---QALTHPFIS  885 (887)
Q Consensus       871 ~RpTa~---eiL~HPwl~  885 (887)
                      +||++.   ++|+|+|..
T Consensus       262 ~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         262 DKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHH
T ss_conf             791999999999999997


No 53 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=344.29  Aligned_cols=256  Identities=19%  Similarity=0.260  Sum_probs=210.3

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCC-CCCCCEEEEEEECCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             243485889988513785189999976789-9998179999960560--2037779999999996099999995256864
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAG-NGEPEEVAIKIIRNNE--TMNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~-~~~~~~vAIKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      |+..++|++++.||.|+||+||+|...... ......||||++....  .....+.+|+.+|..|      .|+||+.++
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l------~h~niv~~~   82 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF------DNPNIVKLL   82 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC------CCTTBCCEE
T ss_pred             CCCHHHCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHC------CCCCCCCCE
T ss_conf             38988938867982078839999998887657788299999988210857999999999999966------899765524


Q ss_pred             CEEEECCEEEEEEECC-HHHHHHHHHHHCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             0111268389997621-1239999998166---------------------78999999999999999999742115623
Q 002727          640 SSFKYRNHLCLVFESL-HMNLREVLKKFGR---------------------NIGLKLTAVRAYAKQLFIALKHLKNCGVL  697 (887)
Q Consensus       640 ~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~---------------------~~~ls~~~~~~i~~qIl~aL~yLHs~gIi  697 (887)
                      ++|...+.+++|||++ +|+|.++|.....                     ...|++..+..|+.||+.||.|||+++||
T Consensus        83 ~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iv  162 (301)
T d1lufa_          83 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV  162 (301)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             66605980389998158992999998527554210000111001210346788989999999999999985541357868


Q ss_pred             CCCCCCCCCCCCCCCCEEEEEECCCCEECCCC----CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC-C
Q ss_conf             15788997312589990999822742005889----866765577655524460899994356999999999999099-9
Q 002727          698 HCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKN----EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGK-V  772 (887)
Q Consensus       698 HrDLKP~NILi~~~~~~iKL~DFG~a~~~~~~----~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~-~  772 (887)
                      |+||||+||||+. ++.+||+|||+|......    ......+++.|+|||++.+..|+.++||||||||||+|++|. +
T Consensus       163 HrDlKp~NILld~-~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         163 HRDLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CSCCSGGGEEECG-GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EEEECCCCEEECC-CCCEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCC
T ss_conf             5488401168989-992898331442113677641115777767676798997268898056302523629999806899


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf             99999918999999985099976653016666634433335566767824699999998615988745422489999956
Q 002727          773 LFPGATNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPK  852 (887)
Q Consensus       773 PF~~~~~~~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  852 (887)
                      ||.+.+..+.+..+.....                                                       +..+..
T Consensus       242 p~~~~~~~e~~~~v~~~~~-------------------------------------------------------~~~p~~  266 (301)
T d1lufa_         242 PYYGMAHEEVIYYVRDGNI-------------------------------------------------------LACPEN  266 (301)
T ss_dssp             TTTTSCHHHHHHHHHTTCC-------------------------------------------------------CCCCTT
T ss_pred             CCCCCCHHHHHHHHHCCCC-------------------------------------------------------CCCCCC
T ss_conf             9999899999999973997-------------------------------------------------------888732


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             5899999999803139899969998984
Q 002727          853 MLANFKDLLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       853 ~s~~~~dLL~kmL~~DP~~RpTa~eiL~  880 (887)
                      ++..+.+||..||..+|.+|||+.||++
T Consensus       267 ~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         267 CPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf             5299999999974889657939999999


No 54 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=335.37  Aligned_cols=258  Identities=22%  Similarity=0.333  Sum_probs=211.2

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCC-CCCCCCEEEEEEECCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             24348588998851378518999997678-99998179999960560--2037779999999996099999995256864
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKA-GNGEPEEVAIKIIRNNE--TMNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~-~~~~~~~vAIKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      ++-.++|.+++.||.|+||.||+|..... .......||||+++...  .....+..|+.++..|.     +||||++++
T Consensus        19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~-----~HpnIv~~~   93 (311)
T d1t46a_          19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHMNIVNLL   93 (311)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEE
T ss_pred             CCCHHHEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC-----CCCCEEEEE
T ss_conf             377899698549820688299999980664477886999999874248779999999999987626-----999887899


Q ss_pred             CEEEECCEEEEEEECC-HHHHHHHHHHHCC---------------CCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
Q ss_conf             0111268389997621-1239999998166---------------78999999999999999999742115623157889
Q 002727          640 SSFKYRNHLCLVFESL-HMNLREVLKKFGR---------------NIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKP  703 (887)
Q Consensus       640 ~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~---------------~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP  703 (887)
                      ++|.....+||||||+ +|+|.++|.....               ...+++..+..|+.||+.||.|||+++|||+||||
T Consensus        94 g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp  173 (311)
T d1t46a_          94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (311)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
T ss_conf             89831997899997379987999998535665444445332223345889999999999999999988757926662410


Q ss_pred             CCCCCCCCCCEEEEEECCCCEECCCCC----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCC
Q ss_conf             973125899909998227420058898----667655776555244608999943569999999999990-999999999
Q 002727          704 DNMLVNEAKNVLKLCDFGNAMFAGKNE----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGAT  778 (887)
Q Consensus       704 ~NILi~~~~~~iKL~DFG~a~~~~~~~----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~  778 (887)
                      +|||++. .+.++|+|||++.......    ....++|+.|+|||++.+..++.++|||||||+||+|++ |.+||.+..
T Consensus       174 ~NIl~~~-~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~  252 (311)
T d1t46a_         174 RNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (311)
T ss_dssp             GGEEEET-TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             CCCCCCC-CCCCCCCCCCHHEECCCCCCCEEEEECCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             2100002-575210234010233678861586201359687677886179999740010258999999858998877899


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             18999999985099976653016666634433335566767824699999998615988745422489999956589999
Q 002727          779 NNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFK  858 (887)
Q Consensus       779 ~~~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~  858 (887)
                      ....+..++.....+                                                      ..+..++..+.
T Consensus       253 ~~~~~~~~i~~~~~~------------------------------------------------------~~~~~~~~~l~  278 (311)
T d1t46a_         253 VDSKFYKMIKEGFRM------------------------------------------------------LSPEHAPAEMY  278 (311)
T ss_dssp             SSHHHHHHHHHTCCC------------------------------------------------------CCCTTSCHHHH
T ss_pred             HHHHHHHHHHCCCCC------------------------------------------------------CCCCCCCHHHH
T ss_conf             899999998668988------------------------------------------------------98543659999


Q ss_pred             HHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             9999803139899969998984
Q 002727          859 DLLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       859 dLL~kmL~~DP~~RpTa~eiL~  880 (887)
                      +||.+||.+||.+|||+.+||+
T Consensus       279 ~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         279 DIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHCCCCHHHCCCHHHHHH
T ss_conf             9999975779657929999999


No 55 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=340.91  Aligned_cols=256  Identities=23%  Similarity=0.350  Sum_probs=210.3

Q ss_pred             EECCCEEEEEEECCCCCEEEEEEEECCCCC---CCCCEEEEEEECCCCH--HHHHHHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             434858899885137851899999767899---9981799999605602--03777999999999609999999525686
Q 002727          564 ILDGRYEVTAAHGKGVFSTVVRAKDLKAGN---GEPEEVAIKIIRNNET--MNKAGQTEVQILKKLAGADPENKRHCIRF  638 (887)
Q Consensus       564 il~~rY~i~~~LG~G~fG~Vy~a~d~~~~~---~~~~~vAIKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l  638 (887)
                      +..++|.+++.||.|+||.||+|....++.   .....||||+++....  ....+..|+.++..+.     .||||+++
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~-----~HpnIv~~   84 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINL   84 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCE
T ss_pred             CCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC-----CCCEEEEC
T ss_conf             2589969700985167828999998578755566754999999881128688999999999999813-----99969734


Q ss_pred             CCEEEECCEEEEEEECC-HHHHHHHHHHHCC-------------CCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
Q ss_conf             40111268389997621-1239999998166-------------789999999999999999997421156231578899
Q 002727          639 ASSFKYRNHLCLVFESL-HMNLREVLKKFGR-------------NIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPD  704 (887)
Q Consensus       639 ~~~~~~~~~l~lV~E~~-~gsL~~lL~~~~~-------------~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~  704 (887)
                      +++|.....+++||||+ +|+|.++|.....             ...|++..+..|+.||+.||.|||+.+|||+||||+
T Consensus        85 ~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~  164 (299)
T d1fgka_          85 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  164 (299)
T ss_dssp             EEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             CCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf             65220188689999736999099999860677643222334574346799999999999999998766379786302210


Q ss_pred             CCCCCCCCCEEEEEECCCCEECCCCC----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCH
Q ss_conf             73125899909998227420058898----667655776555244608999943569999999999990-9999999991
Q 002727          705 NMLVNEAKNVLKLCDFGNAMFAGKNE----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATN  779 (887)
Q Consensus       705 NILi~~~~~~iKL~DFG~a~~~~~~~----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~  779 (887)
                      |||++. ++.+||+|||++.......    .....+++.|+|||++.+..|+.++||||||||||+|++ |.+||.+.+.
T Consensus       165 NiLl~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~  243 (299)
T d1fgka_         165 NVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV  243 (299)
T ss_dssp             GEEECT-TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             CEEECC-CCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf             224547-8976762211101135555543146678884663266751798882555477588888740179898999999


Q ss_pred             HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             89999999850999766530166666344333355667678246999999986159887454224899999565899999
Q 002727          780 NDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKD  859 (887)
Q Consensus       780 ~~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~d  859 (887)
                      ...+..+.....                                                       +..+..++..+.+
T Consensus       244 ~~~~~~i~~~~~-------------------------------------------------------~~~p~~~~~~l~~  268 (299)
T d1fgka_         244 EELFKLLKEGHR-------------------------------------------------------MDKPSNCTNELYM  268 (299)
T ss_dssp             HHHHHHHHTTCC-------------------------------------------------------CCCCSSCCHHHHH
T ss_pred             HHHHHHHHCCCC-------------------------------------------------------CCCCCCCHHHHHH
T ss_conf             999999972888-------------------------------------------------------8987435299999


Q ss_pred             HHHHHCCCCCCCCCCHHHHHH
Q ss_conf             999803139899969998984
Q 002727          860 LLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       860 LL~kmL~~DP~~RpTa~eiL~  880 (887)
                      ||.+||+.||..||||.|||+
T Consensus       269 li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         269 MMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHCCCCHHHCCCHHHHHH
T ss_conf             999976679767939999999


No 56 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=342.13  Aligned_cols=252  Identities=23%  Similarity=0.250  Sum_probs=207.1

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
Q ss_conf             85889988513785189999976789999817999996056--0203777999999999609999999525686401112
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY  644 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~  644 (887)
                      ++|.+.++||+|+||+||+|.+..++.  ...||||.+...  ......+..|+.+|..|.     .||||++++++|..
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~HpnIv~~~~~~~~   82 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGL--RMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEH   82 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTE--EEEEEEEEEECC------CHHHHHHHHHTTCC-----CCTTBCCEEEEEEE
T ss_pred             HHCEEEEEEEECCCCEEEEEEECCCCE--EEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC-----CCCCEEEEEEEEEC
T ss_conf             996887798207882899999989996--99999999782338579999999999998622-----89988367888841


Q ss_pred             CCEEEEEEECC-HHHHHHHHHHH-------------CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
Q ss_conf             68389997621-12399999981-------------66789999999999999999997421156231578899731258
Q 002727          645 RNHLCLVFESL-HMNLREVLKKF-------------GRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNE  710 (887)
Q Consensus       645 ~~~l~lV~E~~-~gsL~~lL~~~-------------~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~  710 (887)
                      .+.+||||||+ +|+|.++|...             .....|++..+..++.||+.||.|||+.+|||+||||+|||++.
T Consensus        83 ~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~  162 (309)
T d1fvra_          83 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  162 (309)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
T ss_conf             87369999802898699998640355555123101234578999999999999999987663089545550520489868


Q ss_pred             CCCEEEEEECCCCEECCCCC-CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHH
Q ss_conf             99909998227420058898-66765577655524460899994356999999999999099-99999991899999998
Q 002727          711 AKNVLKLCDFGNAMFAGKNE-ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGK-VLFPGATNNDMLRLHME  788 (887)
Q Consensus       711 ~~~~iKL~DFG~a~~~~~~~-~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~-~PF~~~~~~~~l~~i~~  788 (887)
                       .+.+||+|||+|....... .....+|..|+|||++.+..|+.++||||||||||+|++|. +||.+.+..+.+..+..
T Consensus       163 -~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~  241 (309)
T d1fvra_         163 -NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  241 (309)
T ss_dssp             -GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             -CCCEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf             -8763874344322444223455301377555538752699996221531388999998368999999999999999982


Q ss_pred             HHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             50999766530166666344333355667678246999999986159887454224899999565899999999803139
Q 002727          789 LKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLD  868 (887)
Q Consensus       789 ~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~D  868 (887)
                      ..                                                       .+..+..++..+.+||.+||..|
T Consensus       242 ~~-------------------------------------------------------~~~~~~~~~~~~~~li~~cl~~d  266 (309)
T d1fvra_         242 GY-------------------------------------------------------RLEKPLNCDDEVYDLMRQCWREK  266 (309)
T ss_dssp             TC-------------------------------------------------------CCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             CC-------------------------------------------------------CCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             68-------------------------------------------------------88887667899999999976789


Q ss_pred             CCCCCCHHHHHHC
Q ss_conf             8999699989847
Q 002727          869 PEKRMTVAQALTH  881 (887)
Q Consensus       869 P~~RpTa~eiL~H  881 (887)
                      |.+|||+.+||+|
T Consensus       267 P~~RPs~~eil~~  279 (309)
T d1fvra_         267 PYERPSFAQILVS  279 (309)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HHHCCCHHHHHHH
T ss_conf             6689499999999


No 57 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=0  Score=331.71  Aligned_cols=255  Identities=20%  Similarity=0.213  Sum_probs=205.6

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEE
Q ss_conf             24348588998851378518999997678999981799999605602037779999999996099999995256864011
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSF  642 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~  642 (887)
                      .++.++|.+++.||.|+||+||+|.+..++    ..||||++.... ....+..|+.++..|.     ++++++.+++++
T Consensus         1 ~vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~----~~vAvK~~~~~~-~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~   70 (293)
T d1csna_           1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNN----QQVAIKFEPRRS-DAPQLRDEYRTYKLLA-----GCTGIPNVYYFG   70 (293)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTT----EEEEEEEEECCT-TSCCHHHHHHHHHHTT-----TCTTCCCEEEEE
T ss_pred             CCCCCCEEEEEEEECCCCEEEEEEEECCCC----CEEEEEEECCCC-CCHHHHHHHHHHHHHC-----CCCCCCEEEEEE
T ss_conf             978980699799841788299999998899----799999975025-8299999999999964-----899987799996


Q ss_pred             EECCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC----CCCEEEEE
Q ss_conf             12683899976211239999998166789999999999999999997421156231578899731258----99909998
Q 002727          643 KYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNE----AKNVLKLC  718 (887)
Q Consensus       643 ~~~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~----~~~~iKL~  718 (887)
                      ....+.|+|||+++++|.+++...+.  .+++..+..++.||+.||.|||++||||+||||+||||+.    ..+.+||+
T Consensus        71 ~~~~~~~~vme~~~~~l~~~~~~~~~--~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~  148 (293)
T d1csna_          71 QEGLHNVLVIDLLGPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVV  148 (293)
T ss_dssp             EETTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred             ECCCCCEEEEEECCCCHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCCCEEEC
T ss_conf             01881179999648887999975203--1106899999999999999999779662667713152347543447956872


Q ss_pred             ECCCCEECCCC---------CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHH
Q ss_conf             22742005889---------8667655776555244608999943569999999999990999999999189---99999
Q 002727          719 DFGNAMFAGKN---------EITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGATNND---MLRLH  786 (887)
Q Consensus       719 DFG~a~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~~~~---~l~~i  786 (887)
                      |||+|......         ....++||+.|+|||++.+..|+.++|||||||+||+|++|..||.+.....   .+..+
T Consensus       149 DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i  228 (293)
T d1csna_         149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI  228 (293)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCEEECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf             36605771467665411102467627751026798964888886999898319999998698767885302199999999


Q ss_pred             HHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             98509997665301666663443333556676782469999999861598874542248999995658999999998031
Q 002727          787 MELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFV  866 (887)
Q Consensus       787 ~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~  866 (887)
                      .......|..-                                                   ..+.++.+|.+||..|+.
T Consensus       229 ~~~~~~~~~~~---------------------------------------------------l~~~~p~~l~~ii~~~~~  257 (293)
T d1csna_         229 GEKKQSTPLRE---------------------------------------------------LCAGFPEEFYKYMHYARN  257 (293)
T ss_dssp             HHHHHHSCHHH---------------------------------------------------HTTTSCHHHHHHHHHHHH
T ss_pred             HHCCCCCCHHH---------------------------------------------------HCCCCCHHHHHHHHHHHC
T ss_conf             70567999589---------------------------------------------------657998999999999843


Q ss_pred             CCCCCCCCHHHHHH
Q ss_conf             39899969998984
Q 002727          867 LDPEKRMTVAQALT  880 (887)
Q Consensus       867 ~DP~~RpTa~eiL~  880 (887)
                      .+|.+||+.+.+.+
T Consensus       258 ~~~~~rP~y~~l~~  271 (293)
T d1csna_         258 LAFDATPDYDYLQG  271 (293)
T ss_dssp             CCTTCCCCHHHHHH
T ss_pred             CCCCCCCCHHHHHH
T ss_conf             99300859999999


No 58 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=337.92  Aligned_cols=261  Identities=19%  Similarity=0.252  Sum_probs=213.6

Q ss_pred             CEECCCEEEEEEECCCCCEEEEEEEECCCCC-CCCCEEEEEEECCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2434858899885137851899999767899-998179999960560--2037779999999996099999995256864
Q 002727          563 EILDGRYEVTAAHGKGVFSTVVRAKDLKAGN-GEPEEVAIKIIRNNE--TMNKAGQTEVQILKKLAGADPENKRHCIRFA  639 (887)
Q Consensus       563 eil~~rY~i~~~LG~G~fG~Vy~a~d~~~~~-~~~~~vAIKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~  639 (887)
                      ++..++|.+++.||.|+||+||+|.+..... .....||||++....  .....+..|+.++.++      +||||++++
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l------~h~nIv~~~   89 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF------NCHHVVRLL   89 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC------CCTTBCCEE
T ss_pred             EECHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCEEEEE
T ss_conf             42689918835982078818999998786447789689999987012868999999999999976------999884125


Q ss_pred             CEEEECCEEEEEEECC-HHHHHHHHHHHC-------CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
Q ss_conf             0111268389997621-123999999816-------67899999999999999999974211562315788997312589
Q 002727          640 SSFKYRNHLCLVFESL-HMNLREVLKKFG-------RNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEA  711 (887)
Q Consensus       640 ~~~~~~~~l~lV~E~~-~gsL~~lL~~~~-------~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~  711 (887)
                      ++|...+.++|||||+ +|+|.+++....       ....+++..+..|+.||+.||.|||+++|||+||||+||||+. 
T Consensus        90 ~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~-  168 (308)
T d1p4oa_          90 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-  168 (308)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT-
T ss_pred             EEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECC-
T ss_conf             4784288106777604899889998750332113444688799999999999999999876479654328677540359-


Q ss_pred             CCEEEEEECCCCEECCCCC----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHH
Q ss_conf             9909998227420058898----6676557765552446089999435699999999999909-9999999918999999
Q 002727          712 KNVLKLCDFGNAMFAGKNE----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTG-KVLFPGATNNDMLRLH  786 (887)
Q Consensus       712 ~~~iKL~DFG~a~~~~~~~----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG-~~PF~~~~~~~~l~~i  786 (887)
                      ++.+||+|||+|.......    .....+++.|+|||++.+..|+.++|||||||+||+|++| .+||.+.+..+.+..+
T Consensus       169 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i  248 (308)
T d1p4oa_         169 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV  248 (308)
T ss_dssp             TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred             CCEEEEEECCCCEECCCCCCEEECCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             96499942454202357763031340231632378888736998833344437899999996899999998999999999


Q ss_pred             HHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             98509997665301666663443333556676782469999999861598874542248999995658999999998031
Q 002727          787 MELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFV  866 (887)
Q Consensus       787 ~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~  866 (887)
                      .....                                                       +..++.++..+.+||.+||+
T Consensus       249 ~~~~~-------------------------------------------------------~~~p~~~~~~l~~li~~cl~  273 (308)
T d1p4oa_         249 MEGGL-------------------------------------------------------LDKPDNCPDMLFELMRMCWQ  273 (308)
T ss_dssp             HTTCC-------------------------------------------------------CCCCTTCCHHHHHHHHHHTC
T ss_pred             HHCCC-------------------------------------------------------CCCCCCCHHHHHHHHHHHCC
T ss_conf             80888-------------------------------------------------------88863353999999999757


Q ss_pred             CCCCCCCCHHHHHH------CCCCC
Q ss_conf             39899969998984------79877
Q 002727          867 LDPEKRMTVAQALT------HPFIS  885 (887)
Q Consensus       867 ~DP~~RpTa~eiL~------HPwl~  885 (887)
                      .+|.+|||+.+||+      +|+|.
T Consensus       274 ~~P~~RPs~~~il~~L~~~~~~~~~  298 (308)
T d1p4oa_         274 YNPKMRPSFLEIISSIKEEMEPGFR  298 (308)
T ss_dssp             SSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             CCHHHCCCHHHHHHHHHHHCCCCCC
T ss_conf             7965893999999997876177875


No 59 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=340.37  Aligned_cols=250  Identities=21%  Similarity=0.291  Sum_probs=205.9

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC----CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCE
Q ss_conf             485889988513785189999976789999817999996056----0203777999999999609999999525686401
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN----ETMNKAGQTEVQILKKLAGADPENKRHCIRFASS  641 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~  641 (887)
                      ..+|.+++.||+|+||+||+|...... .....||||++.+.    ......+.+|+.+|..|      +||||++++++
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~-~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l------~H~nIv~~~g~   79 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPS-GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL------DHRNLIRLYGV   79 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTT-SCEEEEEEEC--------CHHHHHHHHHHHHHHHC------CCTTBCCEEEE
T ss_pred             HHHEEEEEEEECCCCEEEEEEEEECCC-CCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEE
T ss_conf             489199789803888399999998899-90799999999835557989999999999999868------99998789877


Q ss_pred             EEECCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             11268389997621-12399999981667899999999999999999974211562315788997312589990999822
Q 002727          642 FKYRNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDF  720 (887)
Q Consensus       642 ~~~~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DF  720 (887)
                      |.. ..++|||||+ +++|.+++.....  .|++..+..++.||+.||.|||+++|+|+||||.||||+. ++.+||+||
T Consensus        80 ~~~-~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~-~~~vkl~Df  155 (273)
T d1u46a_          80 VLT-PPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT-RDLVKIGDF  155 (273)
T ss_dssp             ECS-SSCEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE-TTEEEECCC
T ss_pred             EEE-CCHHEEEEEECCCCHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCC-CCCEEECCC
T ss_conf             740-100114654238612544421268--9999999999999999998752178752056688815655-654332561


Q ss_pred             CCCEECCCCC-----CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             7420058898-----667655776555244608999943569999999999990-9999999991899999998509997
Q 002727          721 GNAMFAGKNE-----ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFP  794 (887)
Q Consensus       721 G~a~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p  794 (887)
                      |++.......     .....++..|+|||++.+..|+.++|||||||+||||++ |.+||.+.+..+.+..+......+ 
T Consensus       156 Gl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~-  234 (273)
T d1u46a_         156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-  234 (273)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC-
T ss_pred             HHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC-
T ss_conf             1555303588752654763257310799998379999421566148999999968999999969999999998479999-


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             66530166666344333355667678246999999986159887454224899999565899999999803139899969
Q 002727          795 KKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMT  874 (887)
Q Consensus       795 ~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpT  874 (887)
                                                                           ..++.++..+.+||.+||..||.+|||
T Consensus       235 -----------------------------------------------------~~~~~~~~~l~~li~~cl~~dp~~RPt  261 (273)
T d1u46a_         235 -----------------------------------------------------PRPEDCPQDIYNVMVQCWAHKPEDRPT  261 (273)
T ss_dssp             -----------------------------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             -----------------------------------------------------CCCCCCCHHHHHHHHHHCCCCHHHCCC
T ss_conf             -----------------------------------------------------985445399999999976889667929


Q ss_pred             HHHHHH
Q ss_conf             998984
Q 002727          875 VAQALT  880 (887)
Q Consensus       875 a~eiL~  880 (887)
                      +.+|+.
T Consensus       262 ~~ei~~  267 (273)
T d1u46a_         262 FVALRD  267 (273)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999999


No 60 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=339.63  Aligned_cols=247  Identities=22%  Similarity=0.310  Sum_probs=206.1

Q ss_pred             EECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             43485889988513785189999976789999817999996056020377799999999960999999952568640111
Q 002727          564 ILDGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       564 il~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      +-.++|.+++.||.|+||.||+|....      ..||||++++.. ..+.+.+|+.+|.+|      +||||++++++|.
T Consensus         4 i~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~vAvK~i~~~~-~~~~~~~E~~~l~~l------~HpnIv~~~g~~~   70 (262)
T d1byga_           4 LNMKELKLLQTIGKGEFGDVMLGDYRG------NKVAVKCIKNDA-TAQAFLAEASVMTQL------RHSNLVQLLGVIV   70 (262)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT------EEEEEEECCCCC---HHHHHTHHHHTTC------CCTTBCCEEEEEC
T ss_pred             CCHHHEEEEEEEECCCCEEEEEEEECC------EEEEEEEECCHH-HHHHHHHHHHHHHHC------CCCCEEEEEEEEE
T ss_conf             578994885798207980899999999------099999988577-799999999999867------8989854987887


Q ss_pred             E-CCEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             2-68389997621-123999999816678999999999999999999742115623157889973125899909998227
Q 002727          644 Y-RNHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFG  721 (887)
Q Consensus       644 ~-~~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG  721 (887)
                      . .+.+||||||+ +|+|.++|..... ..+++..+..|+.||+.||.|||+.+|||+||+|+|||++. ++.+||+|||
T Consensus        71 ~~~~~~~lv~ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~-~~~~kl~dfg  148 (262)
T d1byga_          71 EEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE-DNVAKVSDFG  148 (262)
T ss_dssp             CC--CCEEEECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TSCEEECCCC
T ss_pred             ECCCCEEEEEECCCCCCHHHHHHHCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECC-CCCEEECCCC
T ss_conf             238928999963699989999874578-88899999999999985232113376553666567601468-9977632456


Q ss_pred             CCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf             420058898667655776555244608999943569999999999990-9999999991899999998509997665301
Q 002727          722 NAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYT-GKVLFPGATNNDMLRLHMELKGPFPKKMLRK  800 (887)
Q Consensus       722 ~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLlt-G~~PF~~~~~~~~l~~i~~~~g~~p~~~l~~  800 (887)
                      ++...... .....++..|+|||++.+..|+.++|||||||+||||++ |.+||...+..+.+..+....          
T Consensus       149 ~s~~~~~~-~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~----------  217 (262)
T d1byga_         149 LTKEASST-QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY----------  217 (262)
T ss_dssp             C-------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC----------
T ss_pred             CCEECCCC-CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC----------
T ss_conf             00344787-7655666467781787279888588777579999999978999999999999999998089----------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             66666344333355667678246999999986159887454224899999565899999999803139899969998984
Q 002727          801 GAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQALT  880 (887)
Q Consensus       801 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~eiL~  880 (887)
                                                                   .+..++.++..+.+||.+||..||.+|||+.+|++
T Consensus       218 ---------------------------------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         218 ---------------------------------------------KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             ---------------------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------------------------------------CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf             ---------------------------------------------99997657999999999975669768939999999


Q ss_pred             C
Q ss_conf             7
Q 002727          881 H  881 (887)
Q Consensus       881 H  881 (887)
                      +
T Consensus       253 ~  253 (262)
T d1byga_         253 Q  253 (262)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 61 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=327.41  Aligned_cols=248  Identities=18%  Similarity=0.198  Sum_probs=197.5

Q ss_pred             EEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECC--CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE-C
Q ss_conf             88998851378518999997678999981799999605--60203777999999999609999999525686401112-6
Q 002727          569 YEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRN--NETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKY-R  645 (887)
Q Consensus       569 Y~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~--~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~-~  645 (887)
                      +.+.++||.|+||+||+|.+..++ .....||||++..  +......+..|+.+|.+|      .||||+++++++.. .
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~~~g~~~~~~  101 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF------SHPNVLSLLGICLRSE  101 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC-----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC------CCTTBCCCCEEEEETT
T ss_pred             ECCCEEEEECCCEEEEEEEEECCC-CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC------CCCCEEEEEEEEEECC
T ss_conf             526669813688099999997799-879999999988436978999999999999867------8999867867898069


Q ss_pred             CEEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf             8389997621-123999999816678999999999999999999742115623157889973125899909998227420
Q 002727          646 NHLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAM  724 (887)
Q Consensus       646 ~~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~  724 (887)
                      ..+++||||+ +++|.+++....  ..+++..+..++.||+.||.|||+.+|+|+||||+||||+. ++.+||+|||++.
T Consensus       102 ~~~~lv~E~~~~g~l~~~~~~~~--~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~-~~~~kL~DFG~~~  178 (311)
T d1r0pa_         102 GSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLAR  178 (311)
T ss_dssp             TEEEEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECSSGGGC
T ss_pred             CCEEEEEEEEECCCHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECC-CCCEEEECCCCHH
T ss_conf             94389998740674144210134--54048999999999887652003367625776687576779-9988991065232


Q ss_pred             ECCCCC------CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHHHCCCCHHH
Q ss_conf             058898------667655776555244608999943569999999999990999999999-1899999998509997665
Q 002727          725 FAGKNE------ITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKVLFPGAT-NNDMLRLHMELKGPFPKKM  797 (887)
Q Consensus       725 ~~~~~~------~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL~eLltG~~PF~~~~-~~~~l~~i~~~~g~~p~~~  797 (887)
                      ......      .....+|+.|+|||++.+..++.++|||||||+||+|++|..||.... ..+....+.....      
T Consensus       179 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~------  252 (311)
T d1r0pa_         179 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR------  252 (311)
T ss_dssp             CTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCC------
T ss_pred             HCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC------
T ss_conf             25566555310025655564556768874379997457466199999999789999888999999999980898------


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             30166666344333355667678246999999986159887454224899999565899999999803139899969998
Q 002727          798 LRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFNIKPKDIGSIVTASPGEDPKMLANFKDLLDKIFVLDPEKRMTVAQ  877 (887)
Q Consensus       798 l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~~dLL~kmL~~DP~~RpTa~e  877 (887)
                                                                       +..++.++..+.+||..||..||.+|||+.|
T Consensus       253 -------------------------------------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~e  283 (311)
T d1r0pa_         253 -------------------------------------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE  283 (311)
T ss_dssp             -------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -------------------------------------------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf             -------------------------------------------------8996447599999999976889768939999


Q ss_pred             HHHC
Q ss_conf             9847
Q 002727          878 ALTH  881 (887)
Q Consensus       878 iL~H  881 (887)
                      +++|
T Consensus       284 i~~~  287 (311)
T d1r0pa_         284 LVSR  287 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 62 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=324.22  Aligned_cols=264  Identities=20%  Similarity=0.252  Sum_probs=189.1

Q ss_pred             CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEC
Q ss_conf             48588998851378518999997678999981799999605602037779999999996099999995256864011126
Q 002727          566 DGRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYR  645 (887)
Q Consensus       566 ~~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~  645 (887)
                      +..|.+.+.||+|+||+||+|...  +    ..||||++............|+..+..+      +||||+++++++...
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~~--g----~~vAvK~~~~~~~~~~~~e~ei~~~~~~------~HpnIv~~~~~~~~~   69 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKWR--G----EEVAVKIFSSREERSWFREAEIYQTVML------RHENILGFIAADNKD   69 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--T----EEEEEEEECGGGHHHHHHHHHHHTSTTC------CCTTBCCEEEEEEEE
T ss_pred             CCEEEEEEEEEECCCEEEEEEEEC--C----EEEEEEEECCCCHHHHHHHHHHHHHHHC------CCCCCCCEEEEEEEC
T ss_conf             868999889820788199999999--9----8999999872004679999999999627------998683268899837


Q ss_pred             C----EEEEEEECC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC--------CCEECCCCCCCCCCCCCCC
Q ss_conf             8----389997621-12399999981667899999999999999999974211--------5623157889973125899
Q 002727          646 N----HLCLVFESL-HMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKN--------CGVLHCDIKPDNMLVNEAK  712 (887)
Q Consensus       646 ~----~l~lV~E~~-~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs--------~gIiHrDLKP~NILi~~~~  712 (887)
                      +    .+||||||+ +|+|..+|...    .+++..+..++.|++.||.|||.        +||||+||||+||||+. +
T Consensus        70 ~~~~~~~~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~-~  144 (303)
T d1vjya_          70 NGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-N  144 (303)
T ss_dssp             CSSSEEEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECT-T
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECC-C
T ss_conf             98604899999646698989998658----999899999999999999998876652046898661531731357868-8


Q ss_pred             CEEEEEECCCCEECCCCC------CCCCCCCCCCCCHHHHCCCC------CCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf             909998227420058898------66765577655524460899------994356999999999999099999999918
Q 002727          713 NVLKLCDFGNAMFAGKNE------ITPYLVSRFYRAPEIILGLP------YDHPLDIWSVGCCLYELYTGKVLFPGATNN  780 (887)
Q Consensus       713 ~~iKL~DFG~a~~~~~~~------~~~~~gt~~Y~APE~l~~~~------~t~~sDIwSLGviL~eLltG~~PF~~~~~~  780 (887)
                      +.+||+|||++.......      .....||+.|+|||++.+..      ++.++|||||||+||+|++|..||......
T Consensus       145 ~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~  224 (303)
T d1vjya_         145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCEEEEECCCCCCCCCCCCCEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             77688763866234677762001355250354767822105654546777675012201599999996289988766311


Q ss_pred             HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             99999998509997665301666663443333556676782469999999861-59887454224899999565899999
Q 002727          781 DMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHATEEDPVTKKAIKKIIFN-IKPKDIGSIVTASPGEDPKMLANFKD  859 (887)
Q Consensus       781 ~~l~~i~~~~g~~p~~~l~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~s~~~~d  859 (887)
                      ...                       +      +......+. ...+...+.. .....+...     .........+.+
T Consensus       225 ~~~-----------------------~------~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~l~~  269 (303)
T d1vjya_         225 QLP-----------------------Y------YDLVPSDPS-VEEMRKVVCEQKLRPNIPNR-----WQSCEALRVMAK  269 (303)
T ss_dssp             CCT-----------------------T------TTTSCSSCC-HHHHHHHHTTSCCCCCCCGG-----GGGCHHHHHHHH
T ss_pred             CCC-----------------------H------HHCCCCCCH-HHHHHHHHHCCCCCCCCCCC-----CCCHHHHHHHHH
T ss_conf             241-----------------------0------122556430-99999987502468887765-----577689999999


Q ss_pred             HHHHHCCCCCCCCCCHHHHHHC
Q ss_conf             9998031398999699989847
Q 002727          860 LLDKIFVLDPEKRMTVAQALTH  881 (887)
Q Consensus       860 LL~kmL~~DP~~RpTa~eiL~H  881 (887)
                      |+.+||+.||.+|||+.||+++
T Consensus       270 li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         270 IMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHCCCCHHHCCCHHHHHHH
T ss_conf             9999760698589599999999


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.90  E-value=1.3e-24  Score=172.18  Aligned_cols=169  Identities=16%  Similarity=0.155  Sum_probs=115.9

Q ss_pred             EEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCH-------------------HHHHHHHHHHHHHHHHCCCC
Q ss_conf             88998851378518999997678999981799999605602-------------------03777999999999609999
Q 002727          569 YEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNET-------------------MNKAGQTEVQILKKLAGADP  629 (887)
Q Consensus       569 Y~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~-------------------~~~~~~~Ei~iL~~L~~~~~  629 (887)
                      +.+..+||.|+||+||+|.+. ++    ..||||++.....                   .......|+.++..+     
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g----~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----   71 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KF----GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-----   71 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TT----EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-----
T ss_pred             CHHCCEEEECCCEEEEEEECC-CC----CEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-----
T ss_conf             022778024856599999979-99----99999998604434666556563000888999999778999999981-----


Q ss_pred             CCCCCEEEECCEEEECCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
Q ss_conf             99952568640111268389997621123999999816678999999999999999999742115623157889973125
Q 002727          630 ENKRHCIRFASSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLKNCGVLHCDIKPDNMLVN  709 (887)
Q Consensus       630 ~~h~~Iv~l~~~~~~~~~l~lV~E~~~gsL~~lL~~~~~~~~ls~~~~~~i~~qIl~aL~yLHs~gIiHrDLKP~NILi~  709 (887)
                       .+.+++.++++.    ..+||||++.+...         ..++...+..++.||+.+|.|||.+||+|+||||+|||++
T Consensus        72 -~~~~v~~~~~~~----~~~lvme~~~~~~~---------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~  137 (191)
T d1zara2          72 -QGLAVPKVYAWE----GNAVLMELIDAKEL---------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS  137 (191)
T ss_dssp             -TTSSSCCEEEEE----TTEEEEECCCCEEG---------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             -CCCCCCEEEEEC----CCEEEEEEECCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEE
T ss_conf             -699914499862----88899995045654---------2001578999999999999998268889836890361142


Q ss_pred             CCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             8999099982274200588986676557765552446089999435699999999
Q 002727          710 EAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCL  764 (887)
Q Consensus       710 ~~~~~iKL~DFG~a~~~~~~~~~~~~gt~~Y~APE~l~~~~~t~~sDIwSLGviL  764 (887)
                      .  ..++|+|||+|.....+....+...-.....+. ....|+..+|+||+.--+
T Consensus       138 ~--~~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         138 E--EGIWIIDFPQSVEVGEEGWREILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             T--TEEEECCCTTCEETTSTTHHHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             C--CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHH
T ss_conf             8--989998778843089987099998779999999-757899844689999987


No 64 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.64  E-value=2.7e-07  Score=60.87  Aligned_cols=147  Identities=15%  Similarity=0.127  Sum_probs=84.8

Q ss_pred             CCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEC
Q ss_conf             858899885137851899999767899998179999960560-2037779999999996099999995256864011126
Q 002727          567 GRYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNE-TMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYR  645 (887)
Q Consensus       567 ~rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~  645 (887)
                      ..|.++...+-++.+.||.+....      ..++||+..... .....+..|..++..|..     +-.+++++.++...
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~~~------~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~-----~vpvP~vl~~~~~~   82 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVGEN------ENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-----KLPVPKVLHFERHD   82 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEECSS------CEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-----TSCCCCEEEEEEET
T ss_pred             HCEEEEECCCCCCCCCEEEEEECC------CEEEEEECCCCCCCCHHHHHHHHHHHHHHHC-----CCCCCCEEEEEECC
T ss_conf             352799767899877189999089------8699998488765325569999999998760-----69987289997508


Q ss_pred             CEEEEEEECCHH-HHHHH-----------------HHHHCC--CC--CCC--HHH----HHHH-----------------
Q ss_conf             838999762112-39999-----------------998166--78--999--999----9999-----------------
Q 002727          646 NHLCLVFESLHM-NLREV-----------------LKKFGR--NI--GLK--LTA----VRAY-----------------  680 (887)
Q Consensus       646 ~~l~lV~E~~~g-sL~~l-----------------L~~~~~--~~--~ls--~~~----~~~i-----------------  680 (887)
                      +..++||+++.| .+...                 +.....  ..  ++.  ...    ...+                 
T Consensus        83 ~~~~lv~~~l~G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (263)
T d1j7la_          83 GWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT  162 (263)
T ss_dssp             TEEEEEEECCSSEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTC
T ss_pred             CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             96499998604334354334402699999989999999855684214357644656555778998776555543033232


Q ss_pred             ----HHHHHHHHHHH---HCCCEECCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             ----99999999742---1156231578899731258999099982274200
Q 002727          681 ----AKQLFIALKHL---KNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMF  725 (887)
Q Consensus       681 ----~~qIl~aL~yL---Hs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~  725 (887)
                          +..++..+.-+   ....++|+|+.|.|||++. ++.+-|+||+.+.+
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~-~~~~~lIDwe~a~~  213 (263)
T d1j7la_         163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD-GKVSGFIDLGRSGR  213 (263)
T ss_dssp             SCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEET-TEEEEECCCTTCEE
T ss_pred             CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECC-CCEEEEEECHHCCC
T ss_conf             0057999999998449867817898600476423649-96599960231441


No 65 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=98.36  E-value=8.1e-06  Score=51.42  Aligned_cols=77  Identities=18%  Similarity=0.112  Sum_probs=48.8

Q ss_pred             EEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--------CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEE
Q ss_conf             988513785189999976789999817999996056--------020377799999999960999999952568640111
Q 002727          572 TAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNN--------ETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFK  643 (887)
Q Consensus       572 ~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~--------~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~  643 (887)
                      .+.||.|....||.+.+...+    ..|+||.....        +........|..+|..+....+   ..+++++.+  
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~----~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~--  101 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHD----RALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP---HLVPRVFYS--  101 (392)
T ss_dssp             EEECCSSSSEEEEEEEC--------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCG---GGSCCEEEE--
T ss_pred             EEEECCCCEEEEEEEEECCCC----EEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC---CCCCEEEEE--
T ss_conf             998079852768999957998----48999617713034677788877899999999998650579---885528998--


Q ss_pred             ECCEEEEEEECCHH
Q ss_conf             26838999762112
Q 002727          644 YRNHLCLVFESLHM  657 (887)
Q Consensus       644 ~~~~l~lV~E~~~g  657 (887)
                      +....++|||++.+
T Consensus       102 d~~~~~lvmE~L~~  115 (392)
T d2pula1         102 DTEMAVTVMEDLSH  115 (392)
T ss_dssp             ETTTTEEEECCCTT
T ss_pred             CCCCCEEEEECCCC
T ss_conf             59887798713577


No 66 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.07  E-value=2e-05  Score=48.87  Aligned_cols=140  Identities=14%  Similarity=0.100  Sum_probs=79.7

Q ss_pred             EECCCC-CEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCEEEEEE
Q ss_conf             851378-5189999976789999817999996056020377799999999960999999952568640111268389997
Q 002727          574 AHGKGV-FSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYRNHLCLVF  652 (887)
Q Consensus       574 ~LG~G~-fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~~~l~lV~  652 (887)
                      .+..|. .+.||.+.... +    ..+++|+.....  ...+..|..+|..|....    ..+++++.++...+..++||
T Consensus        17 ~~~~G~s~~~v~r~~~~~-~----~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~g----vpvP~v~~~~~~~~~~~~v~   85 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQG-R----PVLFVKTDLSGA--LNELQDEAARLSWLATTG----VPCAAVLDVVTEAGRDWLLL   85 (255)
T ss_dssp             ECSCTTSSCEEEEEECTT-S----CCEEEEEECSCT--TSCHHHHHHHHHHHHTTT----CCBCCEEEEEECSSCEEEEE
T ss_pred             ECCCCCCCCEEEEEEECC-C----CEEEEEECCCCC--HHHHHHHHHHHHHHHHCC----CCCCCEEEECCCCCCEEEEE
T ss_conf             767865477589999389-8----789999589667--768999999999998659----99886132224566159998


Q ss_pred             ECCHH-H--------------HHHHHHHHCC----CCCC--CHHHHHHHHH--------------------HHHHHHHHH
Q ss_conf             62112-3--------------9999998166----7899--9999999999--------------------999999742
Q 002727          653 ESLHM-N--------------LREVLKKFGR----NIGL--KLTAVRAYAK--------------------QLFIALKHL  691 (887)
Q Consensus       653 E~~~g-s--------------L~~lL~~~~~----~~~l--s~~~~~~i~~--------------------qIl~aL~yL  691 (887)
                      +++.| .              +..+|.....    ..++  ..........                    .+...+..+
T Consensus        86 ~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (255)
T d1nd4a_          86 GEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL  165 (255)
T ss_dssp             ECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf             74413554322126899999999999987368854488755412468899999987541101134011213799999999


Q ss_pred             -------HCCCEECCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             -------1156231578899731258999099982274200
Q 002727          692 -------KNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMF  725 (887)
Q Consensus       692 -------Hs~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~  725 (887)
                             ....+||+|+.|.|||++. +..+-|+||+.+.+
T Consensus       166 ~~~~~~~~~~~liHgD~~~~Nvl~~~-~~~~~iID~~~~~~  205 (255)
T d1nd4a_         166 KARMPDGEDLVVTHGDACLPNIMVEN-GRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHTCCSSCCEEEECSSCCGGGEEEET-TEEEEECCCTTCEE
T ss_pred             HHHCCCCCCCEEEECCCCCCCEEEEC-CCEEEEEECHHCCC
T ss_conf             87187657956786788876357737-96589998533265


No 67 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=98.02  E-value=0.0001  Score=44.29  Aligned_cols=140  Identities=17%  Similarity=0.135  Sum_probs=77.9

Q ss_pred             CCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE--CCEEEECCEEEEEEECC
Q ss_conf             7851899999767899998179999960560203777999999999609999999525686--40111268389997621
Q 002727          578 GVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRF--ASSFKYRNHLCLVFESL  655 (887)
Q Consensus       578 G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l--~~~~~~~~~l~lV~E~~  655 (887)
                      +.--.||.+... ++    ..|++|+..........+..|..++..|...... .+..+..  -..+......+.|++++
T Consensus        33 s~EN~vy~v~~~-dg----~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gip-v~~p~~~~g~~~~~~~~~~~~l~~~~  106 (325)
T d1zyla1          33 SYENRVYQFQDE-DR----RRFVVKFYRPERWTADQILEEHQFALQLVNDEVP-VAAPVAFNGQTLLNHQGFYFAVFPSV  106 (325)
T ss_dssp             CSSSEEEEECCT-TC----CCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCS-BCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             CCCCEEEEEECC-CC----CEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC-CCCCEECCCCEEEEEEEEEEEEEEEC
T ss_conf             612026999838-99----9799998478778899999999999999855998-78752068980566534799998652


Q ss_pred             HHH------------HHHHHH---HHCC------CCC-------------------CCHH---HHHHHHHHHHHHHHHHH
Q ss_conf             123------------999999---8166------789-------------------9999---99999999999997421
Q 002727          656 HMN------------LREVLK---KFGR------NIG-------------------LKLT---AVRAYAKQLFIALKHLK  692 (887)
Q Consensus       656 ~gs------------L~~lL~---~~~~------~~~-------------------ls~~---~~~~i~~qIl~aL~yLH  692 (887)
                      .|.            +..+|.   ....      ...                   ++..   ....++..++..+.-+-
T Consensus       107 ~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  186 (325)
T d1zyla1         107 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  186 (325)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             77688999999999989999998863035786556778978876656899987476998898999999999999999845


Q ss_pred             ----CCCEECCCCCCCCCCCCCCCCEEEEEECCCCEEC
Q ss_conf             ----1562315788997312589990999822742005
Q 002727          693 ----NCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFA  726 (887)
Q Consensus       693 ----s~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~~  726 (887)
                          ..++||+|+.|.|||++  ++. .|+||+.++..
T Consensus       187 ~~~~p~~liHgDlh~~NvL~~--~~~-~~IDFdd~~~g  221 (325)
T d1zyla1         187 REDFTVLRLHGDCHAGNILWR--DGP-MFVDLDDARNG  221 (325)
T ss_dssp             CSCSCCEECCSSCSGGGEEES--SSE-EECCCTTCCEE
T ss_pred             CCCCCCEEECCCCCCCCEEEE--CCC-EEEECHHCCCC
T ss_conf             456871202478880428783--893-58865201468


No 68 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.94  E-value=0.00015  Score=43.19  Aligned_cols=149  Identities=13%  Similarity=0.054  Sum_probs=77.2

Q ss_pred             CEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE-CCE--EEE
Q ss_conf             58899885137851899999767899998179999960560203777999999999609999999525686-401--112
Q 002727          568 RYEVTAAHGKGVFSTVVRAKDLKAGNGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRF-ASS--FKY  644 (887)
Q Consensus       568 rY~i~~~LG~G~fG~Vy~a~d~~~~~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l-~~~--~~~  644 (887)
                      ...-+..|..|.--+.|++.... +     .+++|++... ........++.++..|..... ..|..+.. -+.  ...
T Consensus        19 ~~~~~~~i~~G~~N~ny~v~t~~-g-----~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~-pvp~pi~~~~g~~~~~~   90 (316)
T d2ppqa1          19 SLTSYKGIAEGVENSNFLLHTTK-D-----PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGL-SCPLPLPRKDGELLGEL   90 (316)
T ss_dssp             CEEEEEEECC---EEEEEEEESS-C-----CEEEEEECC----CCHHHHHHHHHHHHHHTTC-CCCCBCCBTTCCSCEEE
T ss_pred             CCEEEECCCCCCCCCEEEEEECC-C-----CEEEEECCCC-CCHHHHHHHHHHHHHHHHCCC-CCCCCCEECCCCCCEEE
T ss_conf             85685237888526738999789-7-----2899980789-998899999999875430255-54556410489762134


Q ss_pred             CCEEEEEEECCHH---------------HHHHHHHHHCC------CCCC------------------CHHHHHHHHHHHH
Q ss_conf             6838999762112---------------39999998166------7899------------------9999999999999
Q 002727          645 RNHLCLVFESLHM---------------NLREVLKKFGR------NIGL------------------KLTAVRAYAKQLF  685 (887)
Q Consensus       645 ~~~l~lV~E~~~g---------------sL~~lL~~~~~------~~~l------------------s~~~~~~i~~qIl  685 (887)
                      ....+.++.++.+               .+...+.....      ....                  ........+..+.
T Consensus        91 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  170 (316)
T d2ppqa1          91 SGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEI  170 (316)
T ss_dssp             TTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHH
T ss_pred             ECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             12550245311465533320467888889987645444320245310111012002456777765311412799999998


Q ss_pred             HHHHHHH----CCCEECCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             9997421----156231578899731258999099982274200
Q 002727          686 IALKHLK----NCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMF  725 (887)
Q Consensus       686 ~aL~yLH----s~gIiHrDLKP~NILi~~~~~~iKL~DFG~a~~  725 (887)
                      ..+....    ..||||+|+.+.|||++. +..+-|+||+.++.
T Consensus       171 ~~~~~~~~~~L~~giIHgDl~~dNvl~~~-~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         171 DYLAAHWPKDLPAGVIHADLFQDNVFFLG-DELSGLIDFYFACN  213 (316)
T ss_dssp             HHHHHHCCCSSCEEEECSCCCGGGEEEET-TEEEEECCCTTCEE
T ss_pred             HHHHCCCCCCCCCCCCCCCCCHHHHHCCC-CCCEEEECCCCCCC
T ss_conf             76420485545450333786365640204-54126742221236


No 69 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.72  E-value=0.00018  Score=42.70  Aligned_cols=77  Identities=13%  Similarity=0.063  Sum_probs=48.2

Q ss_pred             EEEEECCCCCEEEEEEEECCCC---CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCE
Q ss_conf             9988513785189999976789---9998179999960560203777999999999609999999525686401112683
Q 002727          571 VTAAHGKGVFSTVVRAKDLKAG---NGEPEEVAIKIIRNNETMNKAGQTEVQILKKLAGADPENKRHCIRFASSFKYRNH  647 (887)
Q Consensus       571 i~~~LG~G~fG~Vy~a~d~~~~---~~~~~~vAIKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h~~Iv~l~~~~~~~~~  647 (887)
                      -+..|+.|-.-.+|++......   ...+..|++++.-.. ........|..+++.|....     ..++++.+|..   
T Consensus        46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~~idr~~E~~i~~~ls~~g-----l~Pkll~~~~~---  116 (395)
T d1nw1a_          46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERH-----LGPKLYGIFSG---  116 (395)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTT-----SSSCEEEEETT---
T ss_pred             EEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCC-CHHHHHHHHHHHHHHHHHCC-----CCCEEEEECCC---
T ss_conf             9999178533434899968877544578981799965996-11658999999999997579-----99808998189---


Q ss_pred             EEEEEECCHH
Q ss_conf             8999762112
Q 002727          648 LCLVFESLHM  657 (887)
Q Consensus       648 l~lV~E~~~g  657 (887)
                       .+|++|+.|
T Consensus       117 -g~I~efi~g  125 (395)
T d1nw1a_         117 -GRLEEYIPS  125 (395)
T ss_dssp             -EEEECCCCE
T ss_pred             -CEEEEEECC
T ss_conf             -569997345


No 70 
>d2npta1 d.15.2.2 (A:4-108) Mitogen activated protein kinase kinase 5, Map2k5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.14  E-value=0.014  Score=30.54  Aligned_cols=41  Identities=32%  Similarity=0.419  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             87999998799999999999999887787430234577778
Q 002727          402 QEEEDLDRIMEESRKRRQAILEKYKNQHLQQQKDSNLVDVE  442 (887)
Q Consensus       402 ~~~~~~~k~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~  442 (887)
                      .|+++..+|...+.++++||+++|.....+|+.+++++++.
T Consensus        59 YEDEdGDRITVRSDEEl~AMisyy~~~~~eq~~~g~~~~pL   99 (105)
T d2npta1          59 YEDEDGDRITVRSDEEMKAMLSYYYSTVMEQQVNGQLIEPL   99 (105)
T ss_dssp             EECTTSCEEEECSHHHHHHHHHHHHHHHHHHHTTTCCCCCE
T ss_pred             ECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             02565887687267999999999999999998347998873


Done!