Query 002730
Match_columns 887
No_of_seqs 381 out of 1922
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 17:49:13 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002730.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1445-1449//hhsearch_pdb/002730hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y65_A Kinesin, kinesin heavy 1.0 1 1 744.9 27.1 350 5-392 8-360 (365)
2 3b6u_A Kinesin-like protein KI 1.0 1 1 740.8 27.2 347 4-385 17-372 (372)
3 3bfn_A Kinesin-like protein KI 1.0 1 1 732.6 26.5 343 3-386 16-367 (388)
4 2owm_A Nckin3-434, related to 1.0 1 1 732.5 31.1 348 6-382 36-430 (443)
5 2vvg_A Kinesin-2; motor protei 1.0 1 1 730.7 27.9 332 7-379 3-348 (350)
6 1goj_A Kinesin, kinesin heavy 1.0 1 1 729.8 29.1 340 3-381 1-345 (355)
7 3cob_A Kinesin heavy chain-lik 1.0 1 1 727.8 30.0 347 7-396 4-355 (369)
8 1x88_A Kinesin-like protein KI 1.0 1 1 722.7 23.5 337 4-375 4-359 (359)
9 1t5c_A CENP-E protein, centrom 1.0 1 1 720.0 29.8 339 6-380 2-342 (349)
10 2zfi_A Kinesin-like protein KI 1.0 1 1 717.7 27.1 340 7-375 3-363 (366)
No 1
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=744.86 Aligned_cols=350 Identities=38% Similarity=0.628 Sum_probs=318.6
Q ss_pred CCCCCEEEEEEECCCCCHHHCCCCCEEEEEECC--CCCEEECCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 999963899981799950110599517998479--861234661588042538998861245655226479987268774
Q 002730 5 SENCSVKVAVHVRPLIGDERAQGCKECVAVTHG--NPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNA 82 (887)
Q Consensus 5 ~~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~--~~~v~~~~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~~~~~G~N~ 82 (887)
+..++|+|+|||||+++.|...++..++.+.++ ...+.++.+.|+||+||++++ +|++||+.++.|+|+++|+|||+
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~-~Q~~Vy~~~~~plv~~~l~G~n~ 86 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNA-SQEKVYNEAAKSIVTDVLAGYNG 86 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTC-CHHHHHHHHTHHHHHHHHTTCCE
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEECCEEEECCEEECCCC-CHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 89999599999496994673159925999479987767998998986746964789-98999998630377998679824
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 79952347999662127899998766546799999999998400463289997300012126743027865465444578
Q 002730 83 TVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANG 162 (887)
Q Consensus 83 tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~~ 162 (887)
||||||||||||||||+|+.+++..+|||||++++||..+.......+|.|+|||+|||||+|+|||++..
T Consensus 87 tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------- 157 (365)
T 2y65_A 87 TIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSK--------- 157 (365)
T ss_dssp EEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTC---------
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC---------
T ss_conf 89834589999964886688875557737799999999998336895399999999998772126225876---------
Q ss_pred CCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 88864468999805674589938972864899199999999998233255324578888999827899999985301455
Q 002730 163 HAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHS 242 (887)
Q Consensus 163 ~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti~i~q~~~~~~ 242 (887)
..+.|++++.++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+....
T Consensus 158 ----------~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-- 225 (365)
T 2y65_A 158 ----------VNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE-- 225 (365)
T ss_dssp ----------CSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT--
T ss_pred ----------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECC--
T ss_conf ----------77237887999878427889965879999999999986466523568887887639999999997058--
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 79999998888997469942456654898543356887411246466424127899999995110147899875689990
Q 002730 243 VSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSK 322 (887)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~~~~vPyRdSk 322 (887)
......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++++ .||||||||
T Consensus 226 ------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~----~hvPyRdSk 289 (365)
T 2y65_A 226 ------------NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNK----THIPYRDSK 289 (365)
T ss_dssp ------------TCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCC----SCCCGGGCH
T ss_pred ------------CCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCCH
T ss_conf ------------8878689999997999882012189522478998888889999989999852788----878663578
Q ss_pred CHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHHHHHHHHH
Q ss_conf 03542101799960168874399888989999999999983035366522556644899-99999999999
Q 002730 323 LTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDM-QKLRQQLKYLQ 392 (887)
Q Consensus 323 LTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~~i-~~L~~~i~~L~ 392 (887)
||+||||||||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++....+ .+|+.++..++
T Consensus 290 LT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~ 360 (365)
T 2y65_A 290 LTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNA 360 (365)
T ss_dssp HHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC---------
T ss_pred HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 88987761389963799998467527889999999999997215675411788999999999999999999
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=740.81 Aligned_cols=347 Identities=44% Similarity=0.674 Sum_probs=315.2
Q ss_pred CCCCCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEEC---------CEEEECCEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999638999817999501105995179984798612346---------615880425389988612456552264799
Q 002730 4 ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIG---------THSFTFDHVYGNGGSPSSAMFGECVAPLVD 74 (887)
Q Consensus 4 ~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~~---------~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~ 74 (887)
.....+|+|+|||||+++.|...++..|+.+.+....+.+. .+.|+||+||++++ +|++||+.++.|+|+
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~-~Q~~Vy~~~~~plv~ 95 (372)
T 3b6u_A 17 QGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNA-KQFELYDETFRPLVD 95 (372)
T ss_dssp ----CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTC-CHHHHHHHTHHHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCC-CHHHHHHHHHHHHHH
T ss_conf 7899983999986989935530499638999589987999778877777843887686968867-417898878777789
Q ss_pred HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHCCCCCCC
Q ss_conf 87268774799523479996621278999987665467999999999984004632899973000121267430278654
Q 002730 75 GLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSV 154 (887)
Q Consensus 75 ~~~~G~N~tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~ 154 (887)
++|+|||+||||||||||||||||+|+.+++..+|||||++++||..+.. .....|.|+|||+|||||+|+|||+|..
T Consensus 96 ~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~- 173 (372)
T 3b6u_A 96 SVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR-SQNQQYLVRASYLEIYQEEIRDLLSKDQ- 173 (372)
T ss_dssp HHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT-CSSCEEEEEEEEEEEETTEEEETTSSCT-
T ss_pred HHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCCCC-
T ss_conf 98679813588656899999875755899834488188999999998651-4577369999899996788899778977-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 65444578888644689998056745899389728648991999999999982332553245788889998278999999
Q 002730 155 SKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITL 234 (887)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti~i 234 (887)
...+.|++++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|+|
T Consensus 174 -----------------~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v 236 (372)
T 3b6u_A 174 -----------------TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITI 236 (372)
T ss_dssp -----------------TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEE
T ss_pred -----------------CCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf -----------------777368987999675289889992679999999999997667254557787776429999999
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 85301455799999988889974699424566548985433568874112464664241278999999951101478998
Q 002730 235 EQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGV 314 (887)
Q Consensus 235 ~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~~~ 314 (887)
++..... +.......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|++++. .
T Consensus 237 ~~~~~~~-----------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~----~ 301 (372)
T 3b6u_A 237 ECSEVGL-----------DGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKS----T 301 (372)
T ss_dssp EEEC----------------CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC-------
T ss_pred EEEECCC-----------CCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----C
T ss_conf 9960477-----------887626788999997988765544575154314675650649999999999863898----8
Q ss_pred CCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 75689990035421017999601688743998889899999999999830353665225566448999999
Q 002730 315 HVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLR 385 (887)
Q Consensus 315 ~vPyRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~~i~~L~ 385 (887)
||||||||||+||||+|||||+|+|||||||++.+++||++||+||+||++|+|+|++|.|+..+.+++|+
T Consensus 302 hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~~~~~~~ 372 (372)
T 3b6u_A 302 HIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQ 372 (372)
T ss_dssp CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC-----------
T ss_pred CCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC
T ss_conf 78662208899999862999548999996885247999999999999986455666255775799998519
No 3
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=732.64 Aligned_cols=343 Identities=35% Similarity=0.561 Sum_probs=304.7
Q ss_pred CCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCC-EE-----ECCEEEECCEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999963899981799950110599517998479861-23-----4661588042538998861245655226479987
Q 002730 3 TASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQ-VQ-----IGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGL 76 (887)
Q Consensus 3 ~~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~-v~-----~~~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~~~ 76 (887)
+.+..++|+|+|||||+++.|...++..|+.+..+... +. ...+.|+||+||++++ +|++||+.++.|+|+++
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~-tQ~~Vy~~~~~plv~~~ 94 (388)
T 3bfn_A 16 FQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERS-TQQDIYAGSVQPILRHL 94 (388)
T ss_dssp SSSCCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTC-CHHHHHHHHTGGGHHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCEEECCCC-CHHHHHHHHHHHHHHHH
T ss_conf 56899997999977989914534699863995599859995688887705987236956789-77577899888888876
Q ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---CCCCEEEEEEEEEEEEHHHHHHCCCCCC
Q ss_conf 2687747995234799966212789999876654679999999999840---0463289997300012126743027865
Q 002730 77 FQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETL---RHQMEFQLHVSFIEILKEEVRDLLDSVS 153 (887)
Q Consensus 77 ~~G~N~tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~---~~~~~~~v~vS~~EIynE~i~DLL~~~~ 153 (887)
|+|||+||||||||||||||||+|+ ...+|||||++.+||..+... ...+.|.|.|||+|||||+|+|||+|..
T Consensus 95 l~G~N~tifAYGqTGSGKTyTM~G~---~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~ 171 (388)
T 3bfn_A 95 LEGQNASVLAYGPTGAGKTHTMLGS---PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPAS 171 (388)
T ss_dssp TTTCCEEEEEESCTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSS
T ss_pred HCCCEEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCCC
T ss_conf 1696566761168889997686567---5566416899999999998742337771489999999998886456001678
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 46544457888864468999805674589938972864899199999999998233255324578888999827899999
Q 002730 154 VSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTIT 233 (887)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti~ 233 (887)
..+.|+|++.++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+
T Consensus 172 -------------------~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~ 232 (388)
T 3bfn_A 172 -------------------GDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVK 232 (388)
T ss_dssp -------------------CBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEE
T ss_pred -------------------CCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf -------------------8845998699998853605999589999999999975026522364778777773999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 98530145579999998888997469942456654898543356887411246466424127899999995110147899
Q 002730 234 LEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREG 313 (887)
Q Consensus 234 i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~~ 313 (887)
|.+..... ......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++.
T Consensus 233 v~~~~~~~-------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~----- 294 (388)
T 3bfn_A 233 VDQRERLA-------------PFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGL----- 294 (388)
T ss_dssp EEEEESST-------------TCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTC-----
T ss_pred EEEECCCC-------------CCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_conf 99822688-------------873368899999898776655456755114777675063999999999996699-----
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8756899900354210179996016887439988898999999999998303536652255664489999999
Q 002730 314 VHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQ 386 (887)
Q Consensus 314 ~~vPyRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~~i~~L~~ 386 (887)
.||||||||||+||||||||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++....+..++.
T Consensus 295 ~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l~~~k~ 367 (388)
T 3bfn_A 295 PRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHALGPVKL 367 (388)
T ss_dssp SCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC-------------------
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9886756588999998608996289999979850008999999999999851757673567899899988788
No 4
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=732.53 Aligned_cols=348 Identities=41% Similarity=0.606 Sum_probs=301.1
Q ss_pred CCCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEE--------------------ECCEEEECCEEECCC------CC
Q ss_conf 9996389998179995011059951799847986123--------------------466158804253899------88
Q 002730 6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQ--------------------IGTHSFTFDHVYGNG------GS 59 (887)
Q Consensus 6 ~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~--------------------~~~~~F~FD~Vf~~~------~s 59 (887)
..++|+|+|||||++++|...++..++.+.+....+. ...+.|+||+|||+. .+
T Consensus 36 ~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~a 115 (443)
T 2owm_A 36 PGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHYA 115 (443)
T ss_dssp CCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTCC
T ss_pred CCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCC
T ss_conf 99894999993999968862699459997589862799558876543333321233667726852738278776776578
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC---CCCEEEEEEE
Q ss_conf 6124565522647998726877479952347999662127899998766546799999999998400---4632899973
Q 002730 60 PSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLR---HQMEFQLHVS 136 (887)
Q Consensus 60 ~q~~vy~~~v~~lv~~~~~G~N~tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~---~~~~~~v~vS 136 (887)
+|++||+.++.|+|+++|+|||+||||||||||||||||+|+ ...+|||||++++||..|.... ....|.|+||
T Consensus 116 sQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~---~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS 192 (443)
T 2owm_A 116 TQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGT---PDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVS 192 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCC---TTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 799998763246888863687427998678899998886468---77775379999999998876521367734999999
Q ss_pred EEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 00012126743027865465444578888644689998056745899389728648991999999999982332553245
Q 002730 137 FIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGS 216 (887)
Q Consensus 137 ~~EIynE~i~DLL~~~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~ 216 (887)
|+|||||.|+|||+|.... .....+.|+|++.+|++|.|++++.|.+++|++.+|..|..+|++++
T Consensus 193 ~lEIYnE~i~DLL~~~~~~--------------~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~ 258 (443)
T 2owm_A 193 YFEVYNEHVRDLLAPVVPN--------------KPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVAS 258 (443)
T ss_dssp EEEEETTEEEETTSCCCSS--------------CCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCS
T ss_pred EEEEECCEEEECCCCCCCC--------------CCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9999889756856763457--------------86534430377999995268779982899999999999973378633
Q ss_pred CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 78888999827899999985301455799999988889974699424566548985433568874112464664241278
Q 002730 217 TNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLA 296 (887)
Q Consensus 217 t~~n~~SSRSHaifti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~a 296 (887)
|.||..|||||+||+|+|++...... ........|+|+|||||||||++++++.|.|++||.+||+||++
T Consensus 259 T~~N~~SSRSH~Ifti~v~~~~~~~~----------~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~a 328 (443)
T 2owm_A 259 TKMNDTSSRSHAVFTIMLKQIHHDLE----------TDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTT 328 (443)
T ss_dssp SSSSCBCTTEEEEEEEEEEEEC-----------------CCEEEEEEEEEECCCCCC--------------CCSSHHHHH
T ss_pred CCCCCCCCCCEEEEEEEEEEEECCCC----------CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHH
T ss_conf 75877667771999999998603567----------88740688779999798875356567766412110010578999
Q ss_pred HHHHHHHHHHHCCC-----------------CCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 99999995110147-----------------8998756899900354210179996016887439988898999999999
Q 002730 297 LGNVISALGDEKKR-----------------REGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKY 359 (887)
Q Consensus 297 Lg~vI~aL~~~~~~-----------------~~~~~vPyRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~ 359 (887)
||+||.+|++.+.. +...||||||||||+||||+|||||+|+|||||||+ +++||++||+|
T Consensus 329 Lg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrf 406 (443)
T 2owm_A 329 LGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRY 406 (443)
T ss_dssp HHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHH
T ss_conf 9999999860455555444322234333445677745574547688888862799708999981643--07899999999
Q ss_pred HHHHCCCCCCCCCCC-CCCHHHHH
Q ss_conf 998303536652255-66448999
Q 002730 360 ANRARNIQNKPVVNR-DLISSDMQ 382 (887)
Q Consensus 360 a~rar~I~n~p~vn~-d~~~~~i~ 382 (887)
|+||++|+|+|++|. |+.++...
T Consensus 407 A~rak~I~n~~~vN~~d~~~~~~~ 430 (443)
T 2owm_A 407 ADQAKRIRTRAVVNQVDGVSAAER 430 (443)
T ss_dssp HHHHTTCEECCCCCCC--------
T ss_pred HHHHHHCCCCCEECCCCCCCHHHH
T ss_conf 999854456333513577667888
No 5
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=730.66 Aligned_cols=332 Identities=42% Similarity=0.651 Sum_probs=304.7
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEEC--------------CEEEECCEEECCCCCCCHHHHHHHHHHH
Q ss_conf 99638999817999501105995179984798612346--------------6158804253899886124565522647
Q 002730 7 NCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIG--------------THSFTFDHVYGNGGSPSSAMFGECVAPL 72 (887)
Q Consensus 7 ~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~~--------------~~~F~FD~Vf~~~~s~q~~vy~~~v~~l 72 (887)
..+|+|+|||||++++|...++..|+.+.+...++.+. .+.|+||+||++++ +|++||+.++.|+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~-~Q~~Vy~~~~~pl 81 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTS-CNYGIFQASFKPL 81 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTC-CHHHHHHHTTHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCC-CHHHHHHHHHHHH
T ss_conf 998699999097991332049953899849998899960455443344577852766788979976-1068998789999
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHCCCCC
Q ss_conf 99872687747995234799966212789999876654679999999999840046328999730001212674302786
Q 002730 73 VDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSV 152 (887)
Q Consensus 73 v~~~~~G~N~tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~ 152 (887)
|+++|+|||+||||||||||||||||+|+ ...+|||||++++||..+........|.|.+||+|||||+|+|||++.
T Consensus 82 v~~~l~G~n~tifAYGqTGSGKTyTm~G~---~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~ 158 (350)
T 2vvg_A 82 IDAVLEGFNSTIFAYGQTGAGKTWTMGGN---KEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNN 158 (350)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTTE
T ss_pred HHHHHCCCCEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCC
T ss_conf 99985788526886468999998785358---766755889999999999865368757999999999287888855677
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 54654445788886446899980567458993897286489919999999999823325532457888899982789999
Q 002730 153 SVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTI 232 (887)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti 232 (887)
..+.|+|++.++++|.|++++.|.+++|++.+|..|..+|++++|.||..|||||+||+|
T Consensus 159 --------------------~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i 218 (350)
T 2vvg_A 159 --------------------TKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMV 218 (350)
T ss_dssp --------------------EEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEE
T ss_pred --------------------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
T ss_conf --------------------684256748998881587799749999999999999841460014578888765299999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99853014557999999888899746994245665489854335688741124646642412789999999511014789
Q 002730 233 TLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRRE 312 (887)
Q Consensus 233 ~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~ 312 (887)
+|++..... .......|+|+|||||||||++++++.|.|++||.+||+||++||+||.+|++++
T Consensus 219 ~v~~~~~~~------------~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~---- 282 (350)
T 2vvg_A 219 RIECSEVIE------------NKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGA---- 282 (350)
T ss_dssp EEEEEEC----------------CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTC----
T ss_pred EEEEEECCC------------CCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_conf 999950467------------8761788999999689887554456507788999887589999999999997389----
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 9875689990035421017999601688743998889899999999999830353665225566448
Q 002730 313 GVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISS 379 (887)
Q Consensus 313 ~~~vPyRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~ 379 (887)
.||||||||||+||||+|||||+|+|||||||+..+++||++||+||+||++|+|+|++|.||..+
T Consensus 283 -~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 283 -THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKDA 348 (350)
T ss_dssp -SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTTC
T ss_pred -CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHC
T ss_conf -988764558889989860899628999996884001899999999999985445666125782010
No 6
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=729.75 Aligned_cols=340 Identities=40% Similarity=0.616 Sum_probs=308.6
Q ss_pred CCCCCCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEE----CCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999963899981799950110599517998479861234----66158804253899886124565522647998726
Q 002730 3 TASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI----GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQ 78 (887)
Q Consensus 3 ~~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~----~~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~~~~~ 78 (887)
|++..++|+|+|||||+++.|...|+..|+.+.+... +.+ ..+.|+||+||++++ +|++||+.++.|+|+++|+
T Consensus 1 ms~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~-~~~~~~~~~~~f~FD~Vf~~~~-~Q~~Vy~~~~~plv~~~l~ 78 (355)
T 1goj_A 1 MSSSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDT-CTVDSKEAQGSFTFDRVFDMSC-KQSDIFDFSIKPTVDDILN 78 (355)
T ss_dssp -CCSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTE-EEECSTTCCEEEECSEEECTTC-CHHHHHHHHTHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCE-EEECCCCCCCEEEECEEECCCC-CCHHHHHHHHHHHHHHHHC
T ss_conf 9989998699998899995785069963999869984-9972689752776195989987-6279999999999999857
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHCCCCCCCCCC
Q ss_conf 8774799523479996621278999-987665467999999999984004632899973000121267430278654654
Q 002730 79 GYNATVLAYGQTGSGKTYTMGTGLR-EGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKS 157 (887)
Q Consensus 79 G~N~tilayGqTgSGKTyTm~g~~~-~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~ 157 (887)
|||+||||||||||||||||+|+.. +...+|||||++++||..+.......+|.|+|||+|||||+|+|||+|..
T Consensus 79 G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---- 154 (355)
T 1goj_A 79 GYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN---- 154 (355)
T ss_dssp TCCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC----
T ss_pred CCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC----
T ss_conf 9822288889999986067515788776668706799999999987145685089999999997897788445766----
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 44578888644689998056745899389728648991999999999982332553245788889998278999999853
Q 002730 158 VTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQM 237 (887)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti~i~q~ 237 (887)
..+.|++++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|+|.+.
T Consensus 155 ---------------~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~ 219 (355)
T 1goj_A 155 ---------------DNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQK 219 (355)
T ss_dssp ---------------CSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEE
T ss_pred ---------------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf ---------------78526885899996068779957999999999999975247233447898777609999999996
Q ss_pred ECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 01455799999988889974699424566548985433568874112464664241278999999951101478998756
Q 002730 238 RKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVP 317 (887)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~~~~vP 317 (887)
... ......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|++++ ..|||
T Consensus 220 ~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~----~~hvP 281 (355)
T 1goj_A 220 NVE--------------TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGK----SSHVP 281 (355)
T ss_dssp ETT--------------TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCS----CSCCC
T ss_pred CCC--------------CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCC
T ss_conf 068--------------895566579999898877443246602667888765167999999999986489----99887
Q ss_pred CCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 8999003542101799960168874399888989999999999983035366522556644899
Q 002730 318 YRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDM 381 (887)
Q Consensus 318 yRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~~i 381 (887)
|||||||+||||+|||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++..+++
T Consensus 282 yRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~~l 345 (355)
T 1goj_A 282 YRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPAEL 345 (355)
T ss_dssp GGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCSSS
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH
T ss_conf 7557999999997289976899999796302699999999999997236677556787999999
No 7
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=727.79 Aligned_cols=347 Identities=35% Similarity=0.569 Sum_probs=310.5
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEE-----CCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9963899981799950110599517998479861234-----66158804253899886124565522647998726877
Q 002730 7 NCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI-----GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYN 81 (887)
Q Consensus 7 ~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~-----~~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~~~~~G~N 81 (887)
.++|+|+|||||+++.|...++..++.. ++...+.. ..+.|+||+||++++ +|++||+. +.|+|+++|+|||
T Consensus 4 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~-~~~~~v~~~~~~~~~~~f~FD~Vf~~~~-~Q~~Vy~~-~~~lv~~~l~G~n 80 (369)
T 3cob_A 4 KGKIRVYCRLRPLCEKEIIAKERNAIRS-VDEFTVEHLWKDDKAKQHMYDRVFDGNA-TQDDVFED-TKYLVQSAVDGYN 80 (369)
T ss_dssp CCBCEEEEEECCCCHHHHHTTCCBCEEE-CSSSEEEEECTTSCEEEEECSEEECTTC-CHHHHHHT-TTHHHHHHHTTCE
T ss_pred CCCEEEEEECCCCCHHHCCCCCCEEEEC-CCCEEEEECCCCCCCEEEECCEEECCCC-CCCEEHHH-HHHHHHHHHCCCC
T ss_conf 9984999987999834546798379976-9967999337899826886598989999-73140221-3132576646971
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHCCCCCCCCCCCCCC
Q ss_conf 47995234799966212789999876654679999999999840046328999730001212674302786546544457
Q 002730 82 ATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTAN 161 (887)
Q Consensus 82 ~tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~ 161 (887)
+||||||||||||||||+|+ ...+|||||++.+||..+........|.|++||+|||||.|+|||+|...
T Consensus 81 ~tifAYGqTGSGKTyTM~G~---~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~------- 150 (369)
T 3cob_A 81 VCIFAYGQTGSGKTFTIYGA---DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA------- 150 (369)
T ss_dssp EEEEEEECTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------
T ss_pred EEEEEECCCCCCCEEEECCC---CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC-------
T ss_conf 59998789999883751179---98886258999999999874135752677899987707632345787556-------
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 88886446899980567458993897286489919999999999823325532457888899982789999998530145
Q 002730 162 GHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLH 241 (887)
Q Consensus 162 ~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti~i~q~~~~~ 241 (887)
....+.|++++.++++|.|++++.|.|+++++.+|..|..+|++++|.||..|||||+||+|+|++....
T Consensus 151 ---------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~- 220 (369)
T 3cob_A 151 ---------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ- 220 (369)
T ss_dssp ---------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT-
T ss_pred ---------CCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCC-
T ss_conf ---------7764278997999888059879980899999999998752552303447787776338999999985278-
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 57999999888899746994245665489854335688741124646642412789999999511014789987568999
Q 002730 242 SVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDS 321 (887)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~~~~vPyRdS 321 (887)
......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++. .|||||||
T Consensus 221 -------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdS 282 (369)
T 3cob_A 221 -------------TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGN-----QHIPYRNH 282 (369)
T ss_dssp -------------TCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SCCCGGGC
T ss_pred -------------CCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCCCC
T ss_conf -------------772788899999688787544347630234778787788999999999986489-----96787477
Q ss_pred CCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 003542101799960168874399888989999999999983035366522556644899999999999999995
Q 002730 322 KLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELC 396 (887)
Q Consensus 322 kLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~~i~~L~~~i~~L~~el~ 396 (887)
|||+||||||||||+|+|||||||+..+++||++||+||+||++|+|+|++|.++ .++.+|+.++..++.++.
T Consensus 283 kLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--~ei~~L~~~l~~~~~~~~ 355 (369)
T 3cob_A 283 KLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQAG 355 (369)
T ss_dssp HHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--HHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHHHHHHHHHCC
T ss_conf 7788788762898527999994772002899999999999986545677415788--999999999999997647
No 8
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=722.68 Aligned_cols=337 Identities=40% Similarity=0.623 Sum_probs=301.6
Q ss_pred CCCCCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEE---------CCEEEECCEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999963899981799950110599517998479861234---------6615880425389988612456552264799
Q 002730 4 ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI---------GTHSFTFDHVYGNGGSPSSAMFGECVAPLVD 74 (887)
Q Consensus 4 ~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~---------~~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~ 74 (887)
....++|+|+|||||++..|...++..++.+.+....+.+ ..+.|+||+||++++ +|++||+.++.|+|+
T Consensus 4 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~-~Q~~Vy~~~~~plv~ 82 (359)
T 1x88_A 4 EEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGAST-KQIDVYRSVVCPILD 82 (359)
T ss_dssp -----CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTC-CHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECEEEEECCC-CHHHHHHHHHHHHHH
T ss_conf 7899985999990899925630499649997599857998378766776744875407985267-453789999888689
Q ss_pred HHHCCCCEEEEEECCCCCCCCCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHH
Q ss_conf 872687747995234799966212789999--------876654679999999999840046328999730001212674
Q 002730 75 GLFQGYNATVLAYGQTGSGKTYTMGTGLRE--------GFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVR 146 (887)
Q Consensus 75 ~~~~G~N~tilayGqTgSGKTyTm~g~~~~--------~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~ 146 (887)
++|+|||+||||||||||||||||+|+... ...+|||||++++||..+.. ...+|.|+|||+|||||+|+
T Consensus 83 ~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~v~vS~~EIYnE~i~ 160 (359)
T 1x88_A 83 EVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD--NGTEFSVKVSLLEIYNEELF 160 (359)
T ss_dssp HHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS--SSEEEEEEEEEEEEETTEEE
T ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEEEEEEEEECCEEE
T ss_conf 8737982489984789998756885667766544444566687038999999987741--58259999999999576100
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 302786546544457888864468999805674589--938972864899199999999998233255324578888999
Q 002730 147 DLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSN--GVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSS 224 (887)
Q Consensus 147 DLL~~~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~--~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SS 224 (887)
|||+|... ....+.+++++. ++++|.|++++.|.|++|++.+|..|..+|++++|.||..||
T Consensus 161 DLL~~~~~----------------~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SS 224 (359)
T 1x88_A 161 DLLNPSSD----------------VSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSS 224 (359)
T ss_dssp ETTCTTSC----------------TTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHH
T ss_pred EHHCCCCC----------------CCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 12115655----------------56660588655778988982878998499999999999877514612254778777
Q ss_pred CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 82789999998530145579999998888997469942456654898543356887411246466424127899999995
Q 002730 225 RSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISAL 304 (887)
Q Consensus 225 RSHaifti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL 304 (887)
|||+||+|+|++..... +.......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|
T Consensus 225 RSH~if~i~i~~~~~~~-----------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL 293 (359)
T 1x88_A 225 RSHSVFSVTIHMKETTI-----------DGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITAL 293 (359)
T ss_dssp HCEEEEEEEEEEEEECT-----------TSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEEECCCC-----------CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76289999998743557-----------8871377889999818998735435886320177765307899999999998
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 11014789987568999003542101799960168874399888989999999999983035366522556
Q 002730 305 GDEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRD 375 (887)
Q Consensus 305 ~~~~~~~~~~~vPyRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d 375 (887)
++.. .||||||||||+||||||||||+|+|||||||++.+++||++||+||+||++|+|+|++|++
T Consensus 294 ~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 294 VERT-----PHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp HTTC-----SCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred HCCC-----CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 6479-----97762256688999997589972999999789745689999999999998656676614779
No 9
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=720.00 Aligned_cols=339 Identities=42% Similarity=0.626 Sum_probs=300.9
Q ss_pred CCCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEE--CCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99963899981799950110599517998479861234--6615880425389988612456552264799872687747
Q 002730 6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI--GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNAT 83 (887)
Q Consensus 6 ~~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~--~~~~F~FD~Vf~~~~s~q~~vy~~~v~~lv~~~~~G~N~t 83 (887)
+.++|+|+|||||++.+|...|...++.+......+.. +.+.|+||+||++++ +|++||+.++.|+|+++|+|||+|
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~F~FD~Vf~~~~-tQ~~Vy~~~~~plv~~~l~G~n~t 80 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNE-TTKNVYEEIAAPIIDSAIQGYNGT 80 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETTSSCEEECSCEECTTS-CHHHHHHHTTHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCEEEECCCCEEEECCEEECCCC-CHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9899799998898891564259974799958997699779982887897989999-989999999899999987488640
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99523479996621278999987665467999999999984004632899973000121267430278654654445788
Q 002730 84 VLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGH 163 (887)
Q Consensus 84 ilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~~~ 163 (887)
|||||||||||||||+|+ ...+|||||++++||..+... ....|.|+|||+|||||+|+|||++..
T Consensus 81 ifAYGqTGSGKTyTM~G~---~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~---------- 146 (349)
T 1t5c_A 81 IFAYGQTASGKTYTMMGS---EDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQ---------- 146 (349)
T ss_dssp EEEEESTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHGGGC-TTEEEEEEEEEEEEETTEEEESSSSSC----------
T ss_pred EEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEECCEEEECCCCCC----------
T ss_conf 562158999987687468---888745889999999999747-688679998899984877788667877----------
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCC
Q ss_conf 88644689998056745899389728648991999999999982332553245788889998278999999853014557
Q 002730 164 AGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243 (887)
Q Consensus 164 ~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti~i~q~~~~~~~ 243 (887)
...++.|+|++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|+|++......
T Consensus 147 -------~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~- 218 (349)
T 1t5c_A 147 -------KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEP- 218 (349)
T ss_dssp -------TTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC---
T ss_pred -------CCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC-
T ss_conf -------787746998899998744887998689999999999752334523365778888763999999998516887-
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999988889974699424566548985433568874112464664241278999999951101478998756899900
Q 002730 244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKL 323 (887)
Q Consensus 244 ~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~~~~~~~vPyRdSkL 323 (887)
.........|+|+|||||||||++++++.|.|++||.+||+||++||+||.+|+++++ ..|||||||||
T Consensus 219 --------~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~---~~hvPyRdSkL 287 (349)
T 1t5c_A 219 --------SNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQV---GGFINYRDSKL 287 (349)
T ss_dssp -------------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCC---TTSSCGGGSHH
T ss_pred --------CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCHH
T ss_conf --------6767637899999997998753221478641113354776899999999999855687---77776556377
Q ss_pred HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 354210179996016887439988898999999999998303536652255664489
Q 002730 324 TRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSD 380 (887)
Q Consensus 324 TrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d~~~~~ 380 (887)
|+||||+|||||+|+|||||||+ +++||++||+||+||++|+|+|++|.++....
T Consensus 288 T~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~~ 342 (349)
T 1t5c_A 288 TRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDEL 342 (349)
T ss_dssp HHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC----
T ss_pred HHHHHHHCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
T ss_conf 89999861899629999994777--78999999999999745366765366788889
No 10
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=717.70 Aligned_cols=340 Identities=39% Similarity=0.614 Sum_probs=299.5
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCEEEEEECCCCCEEE------CCEEEECCEEECCCC-------CCCHHHHHHHHHHHH
Q ss_conf 9963899981799950110599517998479861234------661588042538998-------861245655226479
Q 002730 7 NCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI------GTHSFTFDHVYGNGG-------SPSSAMFGECVAPLV 73 (887)
Q Consensus 7 ~~~v~V~vRiRP~~~~E~~~~~~~~~~v~~~~~~v~~------~~~~F~FD~Vf~~~~-------s~q~~vy~~~v~~lv 73 (887)
..+|+|+|||||++.+|...++..++.+.++...+.. ..+.|+||+||++.. ++|++||+.++.|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv 82 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEML 82 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHH
T ss_pred CCCCEEEEECCCCCHHHCCCCCCEEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99808999889998355157997699977996799536777777627862469605766654456769999999999999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEEEEEEEEHHHHHHCCCCC
Q ss_conf 98726877479952347999662127899998766546799999999998400-46328999730001212674302786
Q 002730 74 DGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLR-HQMEFQLHVSFIEILKEEVRDLLDSV 152 (887)
Q Consensus 74 ~~~~~G~N~tilayGqTgSGKTyTm~g~~~~~~~~Giipr~~~~LF~~i~~~~-~~~~~~v~vS~~EIynE~i~DLL~~~ 152 (887)
+++|+|||+||||||||||||||||+|+.. ...+|||||++++||..+.... ....|.|+|||+|||||+|+|||+|.
T Consensus 83 ~~~l~G~N~tifAYGqTGSGKTyTm~G~~~-~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~ 161 (366)
T 2zfi_A 83 QHAFEGYNVCIFAYGQTGAGKSYTMMGKQE-KDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPK 161 (366)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSG-GGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTT
T ss_pred HHHHCCCEEEEEEECCCCCCCCEEEECCCC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEECCCCC
T ss_conf 997469714899858999988458647876-5778669999999999876402677069999999996088478912355
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 54654445788886446899980567458993897286489919999999999823325532457888899982789999
Q 002730 153 SVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTI 232 (887)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSHaifti 232 (887)
. ...+.|+|++.+|++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|
T Consensus 162 ~------------------~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i 223 (366)
T 2zfi_A 162 N------------------KGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNI 223 (366)
T ss_dssp T------------------CSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEE
T ss_pred C------------------CCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 6------------------7885688869998797698999977999999999997622461126577777764599999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC---
Q ss_conf 99853014557999999888899746994245665489854335688741124646642412789999999511014---
Q 002730 233 TLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKK--- 309 (887)
Q Consensus 233 ~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~r~kEg~~IN~sL~aLg~vI~aL~~~~~--- 309 (887)
+|.+...... ........|+|+|||||||||++++++.|.|++||.+||+||++||+||.+|++...
T Consensus 224 ~v~~~~~~~~----------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~ 293 (366)
T 2zfi_A 224 IFTQKRHDAE----------TNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPN 293 (366)
T ss_dssp EEEEEEECTT----------TTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred EEEEECCCCC----------CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999604677----------875413676899996898864554678763004465676789999999999871234543
Q ss_pred ----CCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf ----789987568999003542101799960168874399888989999999999983035366522556
Q 002730 310 ----RREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRD 375 (887)
Q Consensus 310 ----~~~~~~vPyRdSkLTrLLqdsLgGns~t~mI~~vSP~~~~~~ETl~TLr~a~rar~I~n~p~vn~d 375 (887)
.++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+||++|+|+|+++..
T Consensus 294 ~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~~ 363 (366)
T 2zfi_A 294 KNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNHH 363 (366)
T ss_dssp ----------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC-----------
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 3334566774643332889999987289960999999688733499999999999998405588889997
Done!