RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 002733
(887 letters)
>gnl|CDD|215386 PLN02727, PLN02727, NAD kinase.
Length = 986
Score = 1561 bits (4044), Expect = 0.0
Identities = 647/899 (71%), Positives = 730/899 (81%), Gaps = 30/899 (3%)
Query: 1 MDTLCNPLTGECTVSYEFTPEEKPLLEDKIVSVLGCMLSLLNKGREDVLSGRSSIMNAYR 60
MDTLCNPLTGEC VSY+FT EEKPLLEDKIVSVLGCMLSLLNKGRE+VLSGRSSIM+++R
Sbjct: 106 MDTLCNPLTGECPVSYDFTSEEKPLLEDKIVSVLGCMLSLLNKGREEVLSGRSSIMSSFR 165
Query: 61 VADISMTEDQLPPLAIFRSEMKRCCESMHIALENYLTPEDVRSLDVWRKLQRLKNVCYDS 120
+++S ED+LPPLAIFR EMKRCCES+H+ALENYLTP+D RSLDVWRKLQRLKNVCYD+
Sbjct: 166 GSEVSAMEDKLPPLAIFRGEMKRCCESLHVALENYLTPDDDRSLDVWRKLQRLKNVCYDA 225
Query: 121 GFPRGDDYPIHTLFANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTI 180
GFPR DDYP HTLFANW+PVYLS SK+DI SK+SE F RGGQVTEEGLKWL+EKG+KTI
Sbjct: 226 GFPRSDDYPCHTLFANWNPVYLSTSKEDIDSKESEAAFWRGGQVTEEGLKWLLEKGFKTI 285
Query: 181 VDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLY 240
VD+RAE VKDNFY+AA+DDAI SGK+E++KIPVEVRTAP+ EQVEKFASLVS+SSKKP+Y
Sbjct: 286 VDLRAEIVKDNFYQAAVDDAISSGKIEVVKIPVEVRTAPSAEQVEKFASLVSDSSKKPIY 345
Query: 241 LHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLLKDSTRTRKLKASAGKFLLEE 300
LHSKEGVWRT AMVSRW+QYM R A ++ GQ N G L++
Sbjct: 346 LHSKEGVWRTSAMVSRWKQYMTRSAERLLGQNSVVN-----------------GNGKLDQ 388
Query: 301 KYETVKENQDEIQTKNGVF-GFGLSVDMDKRNQSNGAYKGLSSVEGVESAKEVDTAVGSL 359
+ +++E D+ + NG G S+ + + AY L S + + + V T V S
Sbjct: 389 ETGSLQETNDKDSSSNGSESGESCSIKDETGRSNLEAYNSLPSDQSTQQGEMVGTGVESQ 448
Query: 360 GTTFSKETDPFKAQVPPSNFVSKKEMSRFFRSKTTSPPRYFNYQSKRMDVLP-------- 411
+ F+ E+DP KAQVPP + SKKEMS+FFRSK PP Y NY+ K + LP
Sbjct: 449 -SNFNMESDPLKAQVPPCDVFSKKEMSKFFRSKKIYPPTYLNYRRKGFEKLPVPQFTGVT 507
Query: 412 --SEIVSSGPVSGVAETRYSQWSLSGNNLSPNHQNLPAGSEKSSDNNGYVSAGCSTNGFD 469
S+I + +S + ET S +S N SP +Q+ + KSS+ + + S G +
Sbjct: 508 QGSKIDDTDSISRLVETGRSNGLVSEKNSSPKYQSSEFDNGKSSNGSSFASDGSLSVASS 567
Query: 470 RGDRSSMTEANLLTSVTKNLDEQVISSSVRDVQRSNGK-PSNSGDDDLGPIVGNMCASST 528
+ + ++V+ NL+ V S SVR+ QRSNGK S DD+LG I GNMCAS+T
Sbjct: 568 ITNGNPSNNGASSSTVSDNLERSVASVSVRESQRSNGKASLGSSDDELGAIEGNMCASAT 627
Query: 529 GVVRVQSRKKAEMFLVRTDGFSCNREKVTESSLAFTHPSTQQQMLMWKTTPRTVLVLKKP 588
GVVRVQSR+KAEMFLVRTDGFSC REKVTESSLAFTHPSTQQQMLMWK+TP+TVL+LKK
Sbjct: 628 GVVRVQSRRKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKL 687
Query: 589 GPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFV 648
G LMEEAKEVASFLYHQEKMN+LVEPDVHDIFARIPGFGFVQTFY QDTSDLHERVDFV
Sbjct: 688 GQELMEEAKEVASFLYHQEKMNVLVEPDVHDIFARIPGFGFVQTFYSQDTSDLHERVDFV 747
Query: 649 ACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVY 708
ACLGGDGVILHASNLFRGAVPPV+SFNLGSLGFLTSH FED+RQDLRQVI+GNNTLDGVY
Sbjct: 748 ACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHYFEDFRQDLRQVIHGNNTLDGVY 807
Query: 709 ITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVI 768
ITLRMRL CEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVI
Sbjct: 808 ITLRMRLRCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVI 867
Query: 769 VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPDDARSN 828
VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPDDARSN
Sbjct: 868 VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPDDARSN 927
Query: 829 AWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRCLNWNERLDQKAL 887
AWVSFDGKRRQQLSRGDSVRI MS+HP+PTVNKSDQTGDWF SL+RCLNWNERLDQKAL
Sbjct: 928 AWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKSDQTGDWFRSLIRCLNWNERLDQKAL 986
>gnl|CDD|215505 PLN02935, PLN02935, Bifunctional NADH kinase/NAD(+) kinase.
Length = 508
Score = 331 bits (849), Expect = e-104
Identities = 144/326 (44%), Positives = 209/326 (64%), Gaps = 11/326 (3%)
Query: 567 STQQQMLMWKTTPRTVLVLKKP-GPALMEEAKEVASFLYHQEKMNILVEPDVH-DIFARI 624
S++Q L W++ P+TVL++ KP ++ E+ +L Q+ +NI VEP V ++ +
Sbjct: 182 SSKQISLKWESDPQTVLIITKPNSTSVRVLCAEMVRWLREQKGLNIYVEPRVKKELLSES 241
Query: 625 PGFGFVQTFYL-QDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLT 683
F FVQT+ ++ LH +VD V LGGDG +L A+++F+G VPPV+ F++GSLGF+T
Sbjct: 242 SYFNFVQTWEDEKEILLLHTKVDLVITLGGDGTVLWAASMFKGPVPPVVPFSMGSLGFMT 301
Query: 684 SHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNG---KAMPGKVFDVLNEVVVD 740
E YR L ++ G + ITLR RL C I R+ + + VLNEV +D
Sbjct: 302 PFHSEQYRDCLDAILKGP-----ISITLRHRLQCHIIRDAAKNEYETEEPILVLNEVTID 356
Query: 741 RGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPIC 800
RG + +L+ +ECY + +T VQGDG+I++T +GSTAYS AAGGSMVHP VP +LFTPIC
Sbjct: 357 RGISSFLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPIC 416
Query: 801 PHSLSFRPVILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVN 860
PHSLSFRP+ILP+ + +++P ++R AW SFDGK R+QLS GD++ M+ P+PT
Sbjct: 417 PHSLSFRPLILPEYVTIRVQVPFNSRGQAWASFDGKDRKQLSAGDALVCSMAPWPVPTAC 476
Query: 861 KSDQTGDWFHSLVRCLNWNERLDQKA 886
+ + T D+ S+ L+WN R Q
Sbjct: 477 QVESTNDFLRSIHDGLHWNLRKTQSF 502
>gnl|CDD|223139 COG0061, nadF, NAD kinase [Coenzyme metabolism].
Length = 281
Score = 224 bits (572), Expect = 8e-67
Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 21/301 (6%)
Query: 580 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTS 639
+ +V + P ++ AK + FL + + + V+ ++ + +
Sbjct: 2 KVGIVGRPDKPEALKIAKRLYEFL-KFKGVTVEVDQELAEELKDFADYVDDDE------- 53
Query: 640 DLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIY 699
E+ D + LGGDG +L A+ L PV+ NLG LGFLT ++ + L ++
Sbjct: 54 ---EKADLIVVLGGDGTLLRAARLLARLDIPVLGINLGHLGFLTDFEPDELEKALDALLE 110
Query: 700 GNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLI 759
G I R+ L + R + LNEVV+ RGS + + E Y D
Sbjct: 111 GEYR-----IEERLLLEVSVNRGDI----RRALALNEVVIHRGSPAKMIEFEVYIDDEFF 161
Query: 760 TKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLEL 819
+GDG+IV+TPTGSTAY+ +AGG ++HP + + TPICPHSLSFRP++LP S+ + +
Sbjct: 162 ESFRGDGLIVSTPTGSTAYNLSAGGPILHPGLDAIQLTPICPHSLSFRPLVLPSSSTVRI 221
Query: 820 KIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRCLNWN 879
++ + +A V DG+ ++ GD + I S + + + D+F L L W
Sbjct: 222 EVLLTPKRDAVVVVDGQELLLINPGDRIEIRRSPYKARFI-RLRSYDDFFERLRSKLIWG 280
Query: 880 E 880
Sbjct: 281 V 281
>gnl|CDD|216543 pfam01513, NAD_kinase, ATP-NAD kinase. Members of this family
include ATP-NAD kinases EC:2.7.1.23, which catalyzes the
phosphorylation of NAD to NADP utilising ATP and other
nucleoside triphosphates as well as inorganic
polyphosphate as a source of phosphorus. Also includes
NADH kinases EC:2.7.1.86.
Length = 243
Score = 192 bits (490), Expect = 7e-56
Identities = 82/220 (37%), Positives = 121/220 (55%), Gaps = 9/220 (4%)
Query: 641 LHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYG 700
+ E VD + LGGDG L A+ L P++ N G+LGFLT E+ + L ++ G
Sbjct: 32 VEEGVDLIVVLGGDGTALDAARLLGDHDIPILGINTGTLGFLTEFSPEEAAKLLDALLEG 91
Query: 701 NNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLIT 760
I R L + R+ + + V LNEVV+ G + +IE Y L+
Sbjct: 92 E-----YKIEKRELLDVIVRRSKRLLI--VDLALNEVVIIGGPASTMIEIEVYIDGELLE 144
Query: 761 KVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELK 820
++GDG+IV+TPTGSTAYS +AGG ++ P V +L TPICPHSLS RP+++P S++L ++
Sbjct: 145 SIRGDGLIVSTPTGSTAYSLSAGGPIISPGVLAILLTPICPHSLSSRPIVVPSSSKLRIR 204
Query: 821 IPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVN 860
D++ A + DG+R L GD V + S + V
Sbjct: 205 --LDSKEEALLVLDGQRELDLKPGDEVTVRKSPYKPKFVR 242
>gnl|CDD|179379 PRK02155, ppnK, NAD(+)/NADH kinase family protein; Provisional.
Length = 291
Score = 156 bits (396), Expect = 2e-42
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 21/242 (8%)
Query: 644 RVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNT 703
R D LGGDG +L P+I N G LGF+T P +D ++ L +
Sbjct: 63 RADLAVVLGGDGTMLGIGRQLAPYGVPLIGINHGRLGFITDIPLDDMQETLPPM------ 116
Query: 704 LDGVYIT-LRMRLCCEIFRNGKAMPGKVFDVL--NEVVVDRGSNPYLSKIECYEHDRLIT 760
L G Y RM L + R+G+ +F L N+VVV+R + ++ R +
Sbjct: 117 LAGNYEEEERMLLEARVVRDGEP----IFHALAFNDVVVNRSGFSGMVELRVSVDGRFMY 172
Query: 761 KVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELK 820
+ DG+IVATPTGSTAY+ +AGG ++HP +P + PI PH+LS RP++LPD + + ++
Sbjct: 173 NQRSDGLIVATPTGSTAYALSAGGPILHPQLPGWVLVPIAPHTLSNRPIVLPDDSEVAIQ 232
Query: 821 I--PDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRCLNW 878
I D V+FD + L GD + + S H + ++ + ++ +L + L+W
Sbjct: 233 IVGGRDVS----VNFDMQSLTSLELGDRIEVRRSPHTVRFLHPVGYS--YYATLRKKLHW 286
Query: 879 NE 880
NE
Sbjct: 287 NE 288
>gnl|CDD|179257 PRK01231, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 295
Score = 156 bits (396), Expect = 2e-42
Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 20/307 (6%)
Query: 580 RTVLVLKKPG-PALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDT 638
R + ++ + G +++E + + FL + IL E + +PG G +QT
Sbjct: 5 RNIGLIGRLGSSSVVETLRRLKDFLLDRGLEVILDE----ETAEVLPGHG-LQTV---SR 56
Query: 639 SDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVI 698
L E D V +GGDG +L A+ PV+ N G LGFLT ++ L +V
Sbjct: 57 KLLGEVCDLVIVVGGDGSLLGAARALARHNVPVLGINRGRLGFLTDIRPDELEFKLAEV- 115
Query: 699 YGNNTLDGVYIT-LRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDR 757
LDG Y R L E+ R G+ + D LN+VV+ G + + + E Y +
Sbjct: 116 -----LDGHYQEEERFLLEAEVRRGGEVIGQG--DALNDVVLHPGKSTRMIEFELYIDGQ 168
Query: 758 LITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARL 817
+ + DG+IV+TPTGSTAY+ + GG ++HP + ++ P+ PH+LS RP+++ ++ +
Sbjct: 169 FVCSQRSDGLIVSTPTGSTAYALSGGGPIMHPKLDAIVLVPMFPHTLSSRPIVVDGNSEI 228
Query: 818 ELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRCLN 877
++ I D R+ VS DG+ L+ GD+V I + ++ D +++ + L
Sbjct: 229 KIVISKDNRTYPRVSCDGQNSVTLAPGDTVTIRKKPQKLRLIHPLDY--NYYETCRTKLG 286
Query: 878 WNERLDQ 884
W RL
Sbjct: 287 WGSRLGG 293
>gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 569
Score = 149 bits (379), Expect = 6e-38
Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 16/214 (7%)
Query: 643 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNN 702
E + + +GGDG +L AS L G P+I N+G++GFLT E+ + + +I G
Sbjct: 347 EEISHIISIGGDGTVLRASKLVNGEEIPIICINMGTVGFLTEFSKEEIFKAIDSIISGE- 405
Query: 703 TLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKI---ECYEHDRLI 759
I R +L I ++G + LNEVV+ NP +K+ E Y + L+
Sbjct: 406 ----YEIEKRTKLSGFILKDGHQN--ILPSALNEVVITT-KNP--AKMLHFEVYVNGELV 456
Query: 760 TKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLEL 819
+V+ DG+I++TPTGSTAYS +AGG +V P V + PICP LS RP+++ ++ +++
Sbjct: 457 EEVRADGIIISTPTGSTAYSLSAGGPIVEPTVDGFIIVPICPFKLSSRPLVVSANSEIKI 516
Query: 820 KIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSE 853
K+ + +A V DG + +GD + S+
Sbjct: 517 KL---LKKSALVVIDGSIEFEAKKGDEIIFRKSD 547
>gnl|CDD|179862 PRK04539, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 296
Score = 140 bits (354), Expect = 8e-37
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 631 QTFYLQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDY 690
++ + ++L + D VA LGGDG L + P+I N G LGFLT P E
Sbjct: 55 VGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQGHLGFLTQIPREYM 114
Query: 691 RQDLRQVIYGNNTLDGVYITL-RMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSK 749
L V L+G Y+ R+ + + R GK + LN+ V+ RG + +
Sbjct: 115 TDKLLPV------LEGKYLAEERILIEAALIREGKTAERAL--ALNDAVLSRGGAGQMIE 166
Query: 750 IECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPV 809
E + + + + DG+IV+TPTGSTAYS AAGG ++ + PICP S++ RP+
Sbjct: 167 FEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICPQSMTNRPI 226
Query: 810 ILPDSARLELKIPD--DARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGD 867
+PD++ +E+ + DAR V FDG+ + D + I +P+ ++ +D
Sbjct: 227 AIPDTSEIEILVTQGGDAR----VHFDGQTHIDVQNLDRITIRRYRNPLRILHPTDYQ-- 280
Query: 868 WFHSLVRCLNWNERL 882
+F +L + L+W E+L
Sbjct: 281 YFKTLRQKLHWGEQL 295
>gnl|CDD|179455 PRK02645, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 305
Score = 139 bits (353), Expect = 2e-36
Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 643 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-SLGFLTSHPFEDYRQDLRQVIYGN 701
E +D LGGDG +L A+ P++S N+G LGFLT HP + + + V +
Sbjct: 56 ELIDLAIVLGGDGTVLAAARHLAPHDIPILSVNVGGHLGFLT-HPRDLLQDE--SVW--D 110
Query: 702 NTLDGVY-ITLRMRLCCEIFRNGKAMPGKV---FDVLNEVVVDRGSNPYLSKIECYEHDR 757
+ Y I RM L +F ++ V + LN+ + + DR
Sbjct: 111 RLQEDRYAIERRMMLQARVFEGDRSNEEPVSESYYALNDFYL-----------KPASEDR 159
Query: 758 LIT-------------KVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSL 804
T + QGDG+IV+TPTGSTAY+ AAGG ++HP + ++ TPICP SL
Sbjct: 160 SPTCILELEIDGEVVDQYQGDGLIVSTPTGSTAYTMAAGGPILHPGIDAIIVTPICPMSL 219
Query: 805 SFRPVILPDSARLELK-IPD-DARSNAWVSFDGKRRQQLSRGDSVRIFMSEHP 855
S RP+++P +R+ + + D D W DG + G I + HP
Sbjct: 220 SSRPIVIPPGSRVVIWPLGDYDLNIKLWK--DGVLATSIWPGQRCVIQKARHP 270
>gnl|CDD|179241 PRK01185, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 271
Score = 137 bits (347), Expect = 3e-36
Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 16/209 (7%)
Query: 645 VDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTL 704
D + +GGDG IL +G P++ N+G LGFLT ++ ++++I G
Sbjct: 53 ADVIITIGGDGTILRTLQRAKG---PILGINMGGLGFLTEIEIDEVGSAIKKLIRGEYF- 108
Query: 705 DGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQG 764
I RM+L I NG+ ++ D NE V+ + + + Y + +
Sbjct: 109 ----IDERMKLKVYI--NGE----RLEDCTNEAVIHTDRIAKIRQFKIYYDGHFLDTFKA 158
Query: 765 DGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPDD 824
DGVIVATPTGST+YS++AGG ++ PN+ M+ + I P+S + V++P + +E+KI D
Sbjct: 159 DGVIVATPTGSTSYSSSAGGPILLPNLEGMVISYIAPYSSRPKSVVVPSESTVEIKIAGD 218
Query: 825 ARSNAWVSFDGKRRQQLSRGDSVRIFMSE 853
S + DG+ ++S+GD+V I SE
Sbjct: 219 QSS--LLILDGQYEYKISKGDTVEISKSE 245
>gnl|CDD|179635 PRK03708, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 277
Score = 131 bits (332), Expect = 4e-34
Identities = 73/219 (33%), Positives = 121/219 (55%), Gaps = 14/219 (6%)
Query: 637 DTSDLHE-RVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLR 695
D L E VDF+ +GGDG IL + + +P ++ N+G+LGFLT E+ L
Sbjct: 49 DVLPLEEMDVDFIIAIGGDGTILRIEHKTKKDIP-ILGINMGTLGFLTEVEPEETFFALS 107
Query: 696 QVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEH 755
+++ G+ +I R++L ++ NG+ +P D LNEVV+ G + ++ Y
Sbjct: 108 RLLEGD-----YFIDERIKL--RVYINGENVP----DALNEVVILTGIPGKIIHLKYYVD 156
Query: 756 DRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSA 815
L +V+ DG+I++TPTGSTAY+ +AGG V P + +L P+CP LS RP+++P S+
Sbjct: 157 GELADEVRADGLIISTPTGSTAYAMSAGGPFVDPRLDAILIAPLCPFKLSSRPMVVPSSS 216
Query: 816 RLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEH 854
R+++K+ R + DG+ ++L + I S
Sbjct: 217 RIDVKLLRTGRE-IILVIDGQYYEELPPDTEITIKKSPR 254
>gnl|CDD|235122 PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 292
Score = 129 bits (327), Expect = 3e-33
Identities = 80/250 (32%), Positives = 134/250 (53%), Gaps = 17/250 (6%)
Query: 638 TSDLHE---RVDFVACLGGDGVILHASN-LFRGAVPPVISFNLGSLGFLTSHPFEDYRQD 693
T L E + D +GGDG +L A+ L R + VI N G+LGFLT ++ Q
Sbjct: 54 TGTLAEIGQQADLAIVVGGDGNMLGAARVLARYDIK-VIGINRGNLGFLTDLDPDNALQQ 112
Query: 694 LRQVIYGNNTLDGVYIT-LRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIEC 752
L V L+G YI+ R L ++ R+G ++ +NEVV+ G ++ + E
Sbjct: 113 LSDV------LEGHYISEKRFLLEAQVCRHG--QQKRISTAINEVVLHPGKVAHMIEFEV 164
Query: 753 YEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILP 812
Y D + DG+I++TPTGSTAYS +AGG ++ P++ + P+ PH+LS RP+++
Sbjct: 165 YIDDNFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVID 224
Query: 813 DSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSL 872
S+ + LK + RS+ +S D + + G+ V I S++ + ++ D +F++L
Sbjct: 225 SSSTIRLKFSPN-RSDLEISCDSQIALPIQPGEEVLIRRSDYHLNLIHPKDY--SYFNTL 281
Query: 873 VRCLNWNERL 882
L W+++L
Sbjct: 282 RTKLGWSKKL 291
>gnl|CDD|179352 PRK01911, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 292
Score = 123 bits (312), Expect = 4e-31
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 14/245 (5%)
Query: 637 DTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQ 696
D +L D V +GGDG L + + P++ N G LGFL + E+ + + +
Sbjct: 57 DNEELDGSADMVISIGGDGTFLRTATYVGNSNIPILGINTGRLGFLATVSKEEIEETIDE 116
Query: 697 VIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHD 756
++ G+ T++ R ++ N K F LNE+ + + + + Y +
Sbjct: 117 LLNGDYTIE-------ERSLLQLESNPKLFGELNF-ALNEIAILKRDTSSMITVHTYLNG 168
Query: 757 RLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAR 816
+ DG+IVATPTGST YS + GG ++ P+ + TPI PH+L+ RP+++PD
Sbjct: 169 EYLNSYWADGLIVATPTGSTGYSLSCGGPIIVPDAKSFVITPIAPHNLNVRPLVIPDDTE 228
Query: 817 LELKIPDDARS-NAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRC 875
+ L++ ++RS N VS D R + + G + I ++ I V ++ + + +L
Sbjct: 229 ITLEV--ESRSDNFLVSLDS-RSETVDNGTELTIKKADFTIKLVELNNHS--FLKTLRNK 283
Query: 876 LNWNE 880
L W E
Sbjct: 284 LLWGE 288
>gnl|CDD|235121 PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 306
Score = 113 bits (286), Expect = 1e-27
Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 36/295 (12%)
Query: 577 TTPRTVLVLKKPG-PALMEEAKEVASFLYHQEKMNILV---EPDVHDIFARIPGFGFVQT 632
T R VL++ G E A+ VA L I V + + D+ A P +
Sbjct: 3 TASRRVLLVAHTGRDEATEAARRVAKQL---GDAGIGVRVLDAEAVDLGATHPAPDDFRA 59
Query: 633 FY-LQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYR 691
+ D + + V LGGDG IL A+ L R A PV+ NLG +GFL ED
Sbjct: 60 MEVVDADPDAADGCELVLVLGGDGTILRAAELARAADVPVLGVNLGHVGFLAEAEAEDLD 119
Query: 692 QDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIE 751
+ + +V+ + ++ RM L + G+ + + LNE +++ +E
Sbjct: 120 EAVERVVDRDYRVEE-----RMTLDVTVRVGGEI-VWRGW-ALNEASLEKADR--EGMLE 170
Query: 752 CYEHDRLITKVQG--------DGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHS 803
+ +V G DGV+V+TPTGSTAY+ +AGG +V P++ +L P+ H+
Sbjct: 171 V------VLEVDGRPVSSFGCDGVLVSTPTGSTAYAFSAGGPVVWPDLEALLVVPLNAHA 224
Query: 804 LSFRP-VILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIP 857
L RP V+ P S + ++I D S+A + DG+R L G R+ + P
Sbjct: 225 LFARPLVVSPTS-TVAVEILADT-SDAVLWCDGRRSVDLPPG--ARVEVRRGATP 275
>gnl|CDD|172567 PRK14077, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 287
Score = 112 bits (283), Expect = 2e-27
Identities = 79/311 (25%), Positives = 151/311 (48%), Gaps = 30/311 (9%)
Query: 571 QMLMWKTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFV 630
Q + + + ++ +P +L +E ++ L K+ IL+E + +I PG+G
Sbjct: 2 QNKIDHKNIKKIGLVTRPNVSLDKEILKLQKIL-SIYKVEILLEKESAEILDL-PGYG-- 57
Query: 631 QTFYLQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDY 690
+L + DF+ LGGDG ++ V+ + G LGFLT ++
Sbjct: 58 -------LDELFKISDFLISLGGDGTLISLCRKAAEYDKFVLGIHAGHLGFLTDITVDEA 110
Query: 691 RQDLRQVIYGNNTLDGVYITLRMRLCCEIF---RNGKAMPGKVFDVLNEVVVDRGSNPYL 747
+ + G ++ Y+ +F + GK + F N+VV+ + + +
Sbjct: 111 EKFFQAFFQGEFEIEKPYML-------SVFLEKKQGKILEKLAF---NDVVISKNNQASM 160
Query: 748 SKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFR 807
+ IE + +++ + GDGVIVATP GSTAY+ +A G +++P + TP+C HSL+ R
Sbjct: 161 AHIEAFLNEKYFNEYFGDGVIVATPAGSTAYNMSANGPIIYPLSQVFILTPVCSHSLTQR 220
Query: 808 PVILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGD 867
P++LP +E K +S+ + DG+ R +++ S+++ +S+ + + ++ D
Sbjct: 221 PIVLPKGFEVEFK----TKSDCILCIDGQDRYKMNDFKSIKVGLSDKNVALIRHKNR--D 274
Query: 868 WFHSLVRCLNW 878
+F L L+W
Sbjct: 275 YFQILKEKLHW 285
>gnl|CDD|179456 PRK02649, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 305
Score = 107 bits (269), Expect = 2e-25
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 29/183 (15%)
Query: 643 ERVDFVACLGGDGVILHASNLFRGAVP---PVISFNLGSLGFLTSHPFEDYRQDLRQVIY 699
+ F LGGDG +L A R P P+++ N G LGFLT + + QV+
Sbjct: 67 SSMKFAIVLGGDGTVLSA---ARQLAPCGIPLLTINTGHLGFLTEAYLNQLDEAIDQVLA 123
Query: 700 GNNTLDGVYITLRMRLCCEIFRNGK----AMPGKVFDVLNEVVVDRGSNPYLS----KIE 751
G T++ R L + R + A+ LNE+V+ R P S +I
Sbjct: 124 GQYTIE-----ERTMLTVSVMRGDQLRWEAL------SLNEMVLHR--EPLTSMCHFEIA 170
Query: 752 CYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVIL 811
H + + DGVI++TPTGSTAYS +AGG ++ P+VP + TPICPHSL+ R ++
Sbjct: 171 IGRHAPV--DIAADGVILSTPTGSTAYSLSAGGPVITPDVPVLQLTPICPHSLASRALVF 228
Query: 812 PDS 814
DS
Sbjct: 229 SDS 231
>gnl|CDD|167337 PRK02231, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 272
Score = 101 bits (253), Expect = 1e-23
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 12/251 (4%)
Query: 634 YLQDTSDLHERVDFVACLGGDGVIL-HASNLFRGAVPPVISFNLGSLGFLTS-HPFEDYR 691
+L ++ +R +GGDG +L A L + +P +I N G+LGFLT P Y
Sbjct: 32 HLASLEEIGQRAQLAIVIGGDGNMLGRARVLAKYDIP-LIGINRGNLGFLTDIDPKNAYE 90
Query: 692 QDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIE 751
Q + G ++ R L +I RNGK + + LNEVV+ ++
Sbjct: 91 QLEACLERGE-----FFVEERFLLEAKIERNGKIIATS--NALNEVVIHPAKIAHMIDFH 143
Query: 752 CYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVIL 811
Y D+ + DG+I++TPTGSTAYS +AGG ++ PN+ + P+ PH+LS RP+++
Sbjct: 144 VYIDDKFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPNLNAIALVPMFPHTLSSRPLVI 203
Query: 812 PDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHS 871
+++ L+ + VS D + + D V + S + ++ + ++++
Sbjct: 204 DGDSKISLRFAEYNTPQLEVSCDSQIALPFTPDDRVHVQKSPDKLRLLHLKNY--NYYNV 261
Query: 872 LVRCLNWNERL 882
L L W ++L
Sbjct: 262 LSSKLGWLKKL 272
>gnl|CDD|184489 PRK14075, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 256
Score = 92.1 bits (229), Expect = 1e-20
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 645 VDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFED---YRQDLRQVIYGN 701
D + +GGDG +L A+ P++ F G LGFL+S+ E+ + +DL+
Sbjct: 42 ADLIIVVGGDGTVLKAAKKVGT---PLVGFKAGRLGFLSSYTLEEIDRFLEDLKN----W 94
Query: 702 NTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITK 761
N + L++ ++ G LN+V ++R + + +IE D
Sbjct: 95 NFREEKRWFLKI----------ESELGN-HLALNDVTLERDPSQKMVEIEVSFEDHSSMW 143
Query: 762 VQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKI 821
DGV+++TPTGSTAYS + GG ++ PN TPI P L+ R +++P + ++ ++
Sbjct: 144 FFADGVVISTPTGSTAYSLSLGGPIILPNCEVFEITPIAPQFLATRSIVIPSNEKVTVES 203
Query: 822 PDDA 825
D
Sbjct: 204 QRDI 207
>gnl|CDD|179876 PRK04761, ppnK, inorganic polyphosphate/ATP-NAD kinase; Reviewed.
Length = 246
Score = 85.3 bits (212), Expect = 2e-18
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 643 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNN 702
E D + LGGDG +L + + + PV N GS+GFL + ED DL + I
Sbjct: 24 EEADVIVALGGDGFMLQTLHRYMNSGKPVYGMNRGSVGFLMNEYSED---DLLERI--AA 78
Query: 703 TLDGVYITLRMRLCCEIFRNGKAMPGKVFDVL--NEVVVDRGSNPYLSKIECYEHDRL-I 759
V LRM + G+V + L NEV + R + +K+ ++ +
Sbjct: 79 AEPTVLHPLRMT--------ATDVSGEVHEALAINEVSLFRQTRQ-AAKLRISIDGKVRM 129
Query: 760 TKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRP-----VILPDS 814
++ DGV+VATP GSTAY+ +A G ++ + TPI P FRP +LP+S
Sbjct: 130 EELVCDGVLVATPAGSTAYNLSAHGPILPLGSNLLALTPISP----FRPRRWRGALLPNS 185
Query: 815 ARLELKI 821
A + +
Sbjct: 186 ATVRFDV 192
>gnl|CDD|179584 PRK03501, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 264
Score = 57.7 bits (140), Expect = 5e-09
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 728 GKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMV 787
F LNE + R S I+ Y D +GDG++V+TPTGSTAY+ + G++V
Sbjct: 114 STSFYCLNEFSI-RSSIIKTFVIDVYIDDLHFETFRGDGMVVSTPTGSTAYNKSVRGAVV 172
Query: 788 HPNVPCMLFTPICPHSL---SFR----PVILPDSARLELKIPDDARSNAWVSFDGKRRQQ 840
P +PC + + SL ++R P IL +L LKI D + D +
Sbjct: 173 DPLIPCFQVSELA--SLNNNTYRTLGSPFILSHERKLTLKIVQDGNDYPIIGMDN---EA 227
Query: 841 LS--RGDSVRIFMSEHPIPTV 859
LS + + I +S+ I TV
Sbjct: 228 LSIKHVEKIDIRLSDKQIKTV 248
>gnl|CDD|235317 PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 265
Score = 57.1 bits (139), Expect = 8e-09
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 50/215 (23%)
Query: 646 DFVACLGGDGVILHASNLFRGAVPPV--ISFNLGSLGFLTSHPFEDYR------------ 691
D V +GGDG +L A + + + V + + G LGF T D+R
Sbjct: 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTGHLGFYT-----DWRPFEVDKLVIALA 91
Query: 692 QDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIE 751
+D QV+ Y L +++ + +G+ + + LNE + R ++ +
Sbjct: 92 KDPGQVVS--------YPLLEVKI---TYEDGEK---EKYLALNEATIKRIEGTLVADV- 136
Query: 752 CYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLS---FR- 807
Y + L + +GDG+ V+TPTGSTAY+ + GG+++HP++ + T I S++ FR
Sbjct: 137 -YINGVLFERFRGDGLCVSTPTGSTAYNKSLGGAVLHPSIEALQLTEIA--SINNRVFRT 193
Query: 808 ---PVILP--DSARLELKIPDDARSNAWVSFDGKR 837
P+ILP + L+ DD + ++ D
Sbjct: 194 LGSPLILPKHHTITLKPVNDDDYQ----ITVDHLT 224
>gnl|CDD|100598 PRK00561, ppnK, inorganic polyphosphate/ATP-NAD kinase;
Provisional.
Length = 259
Score = 50.6 bits (121), Expect = 1e-06
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 646 DFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLD 705
D++ LGGDG + + + A V+ N G LGF TS D Q+ N LD
Sbjct: 35 DYLFVLGGDGFFVSTAANYNCAGCKVVGINTGHLGFYTSFNETDLDQNFA------NKLD 88
Query: 706 GVYIT----LRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITK 761
+ T L +++ ++ VLNE+ V + Y I + + K
Sbjct: 89 QLKFTQIDLLEVQI-----------DDQIHLVLNELAVYT-NTAY--PINIFIDNEFWEK 134
Query: 762 VQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICP--HSLSF----RPVILPDSA 815
+G G+++ TGSTA + +A G+++ P + + + P H + P+ILP
Sbjct: 135 YRGSGLLIGPRTGSTALAKSAKGAVIFPRIDVIQIIELNPLLHP-NQTTIQSPIILPIDT 193
Query: 816 RLELKIPDDARSNAWVSF--DG-KRRQQLS 842
++E +I + + F DG K R S
Sbjct: 194 KVEFEIKKAFDHDQFPRFYADGAKLRLGNS 223
>gnl|CDD|215502 PLN02929, PLN02929, NADH kinase.
Length = 301
Score = 47.0 bits (112), Expect = 3e-05
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 37/185 (20%)
Query: 645 VDFVACLGGDGVILHASNLFRGAVPPVISFNLG------------------SLGFLTSHP 686
VD V +GGDG +L AS+ ++P V+ N S G L +
Sbjct: 65 VDLVVAVGGDGTLLQASHFLDDSIP-VLGVNSDPTQKDEVEEYSDEFDARRSTGHLCAAT 123
Query: 687 FEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVF-DVL----NEVVVDR 741
ED+ Q L V++G + T R+ + NG + DVL + V R
Sbjct: 124 AEDFEQVLDDVLFG-----RLKPTELSRISTVV--NGTLLETPALNDVLIAHPSPAAVSR 176
Query: 742 GSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVH---PNVPCMLFTP 798
S + V+ G+ V+T GSTA +AGG + ++ M+ P
Sbjct: 177 FS---FRVGRQGGSSGPLINVRSSGLRVSTAAGSTAAMLSAGGFPMPLLSRDLQYMVREP 233
Query: 799 ICPHS 803
I P
Sbjct: 234 ISPGH 238
>gnl|CDD|225240 COG2365, COG2365, Protein tyrosine/serine phosphatase [Signal
transduction mechanisms].
Length = 249
Score = 34.0 bits (78), Expect = 0.28
Identities = 33/167 (19%), Positives = 54/167 (32%), Gaps = 30/167 (17%)
Query: 92 LENYLTPEDVRSLDVWRK----LQRLKNVCYDSGFPRGDDYPIHTLFANWSPVYLSNSKD 147
N+ P D + K L R + S F P+ S
Sbjct: 6 AVNFRDPGDYATTAGRLKKGIKLLR--SAYLASLSLED---NAPLNFLGIIPIIDYRSGQ 60
Query: 148 DIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVE 207
V Q E L L K TI+++R E N D +++
Sbjct: 61 -------PVPV----QPDPELLDALYLK---TIINLRDE---SNTNVELYTDHLINWDKA 103
Query: 208 LIKIPVEVRTAPT----MEQVEKFASLVSNSSKKPLYLHSKEGVWRT 250
I + R+ PT E++ + L++++ P+ +H G RT
Sbjct: 104 AIIMFESYRSFPTREDAAERLVELLQLLADAENGPVLIHCTAGKDRT 150
>gnl|CDD|220976 pfam11091, T4_tail_cap, Tail-tube assembly protein. This tail tube
protein is also referred to as Gp48. It is required for
the assembly and length regulation of the tail tube of
bacteriophage T4.
Length = 348
Score = 34.1 bits (78), Expect = 0.33
Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 438 LSPNHQNLPAGSEKS---SDNNGYVSAGCSTNGFDRGDRSSMTEANLLTSVTKNLDEQVI 494
S + +++ G S S + G VS+ NGF R AN+L +K+ D I
Sbjct: 73 TSGSLRSMRQGLSASSILSKSAGSVSS--KFNGFTRTTFDKEAIANILLPRSKS-DVDTI 129
Query: 495 SSSVRDVQRSNGKPSNSGDDDLGPIVGNMCASSTGVVRVQSRKKAEMFLVRTDGFSCNRE 554
S DVQ S G I+ N +++ T G +
Sbjct: 130 SHEYNDVQDS---LIAKGGGTGTGILSNAASTAVFGALESI----------TQGIMADSG 176
Query: 555 KV--TESSLAFTHPSTQQQMLMWKTTPRTVLVLK 586
+ S + + + W+ TPR++ LK
Sbjct: 177 EQIYNTSRSMYKGADNRTKTFTWQLTPRSLEDLK 210
>gnl|CDD|192589 pfam10444, Nbl1_Borealin_N, Nbl1 / Borealin N terminal. Nbl1 is a
subunit of the conserved CPC, the chromosomal passenger
complex, which regulates mitotic chromosome segregation.
In Fungi and Animalia, this complex consists of the
kinase Aurora B/AIR-2/Ipl1p, INCENP/ICP-1/Sli15p, and
Survivin/BIR-1/Bir1p. In Animalia, a fourth subunit
(Borealin/Dasra/CSC-1) is required for targeting CPC to
centromeres and central spindles. Nbl1 has been shown in
budding yeast to be essential for viability, and for CPC
localisation, stability, integrity, and function. The N
terminus of Borealin is homologous to Nbl1. This family
contains both Nbl1, and the N terminal region of
Borealin.
Length = 59
Score = 29.9 bits (68), Expect = 0.68
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 181 VDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKF 227
V+ RAER++ + YE + ++E+++IP VR + +EK+
Sbjct: 14 VEERAERLRSH-YENLLKSLRARLEIEILRIPRAVRKMKLRDLLEKY 59
>gnl|CDD|219403 pfam07409, GP46, Phage protein GP46. This family contains GP46
phage proteins (approximately 120 residues long).
Length = 115
Score = 31.1 bits (71), Expect = 0.86
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 166 EEGLKWLMEKGYKTIVDIRAERVKDNFYEAAI 197
E L+WL++ G T +D+ AER N +
Sbjct: 66 REALQWLIDDGVATAIDVTAERPGINRLALTV 97
>gnl|CDD|238776 cd01518, RHOD_YceA, Member of the Rhodanese Homology Domain
superfamily. This CD includes Escherichia coli YceA,
Bacillus subtilis YbfQ, and similar uncharacterized
proteins.
Length = 101
Score = 29.9 bits (68), Expect = 1.7
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 139 PVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYK 178
P +L + D + K + +C GG E+ +L E+G+K
Sbjct: 49 PFWLDENLDLLKGKKV-LMYCTGGIRCEKASAYLKERGFK 87
>gnl|CDD|225727 COG3186, COG3186, Phenylalanine-4-hydroxylase [Amino acid transport
and metabolism].
Length = 291
Score = 31.7 bits (72), Expect = 1.8
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 599 VASFLYHQEKMNILVEPDV-HDIFARIP 625
VA+F+ ++++ L EPD+ HD+F +P
Sbjct: 124 VATFMRTPDELDYLQEPDIFHDVFGHVP 151
>gnl|CDD|217330 pfam03035, RNA_capsid, Calicivirus putative RNA polymerase/capsid
protein.
Length = 226
Score = 31.2 bits (71), Expect = 1.9
Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 15/81 (18%)
Query: 393 TTSPPRYFNYQSKRMDVLPSEIVSSGPVSG-----VAETRYSQWSLSGN-NLSPNHQN-- 444
++ P + S V S+G S A +R S W S N NL P
Sbjct: 122 SSPVPVPPSSSSSASSVSSQSTQSTGLSSSSYSSSSASSRTSSWVRSQNSNLEPFMPGAL 181
Query: 445 -----LPAGSEKSSDNNGYVS 460
P S SS +G VS
Sbjct: 182 QTAWVTPPSSTASS--SGTVS 200
>gnl|CDD|130334 TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydroxylase, monomeric
form. This model describes the smaller, monomeric form
of phenylalanine-4-hydroxylase, as found in a small
number of Gram-negative bacteria. The enzyme
irreversibly converts phenylalanine to tryosine and is
known to be the rate-limiting step in phenylalanine
catabolism in some systems. This family is of biopterin
and metal-dependent hydroxylases is related to a family
of longer, multimeric aromatic amino acid hydroxylases
that have additional N-terminal regulatory sequences.
These include tyrosine 3-monooxygenase,
phenylalanine-4-hydroxylase, and tryptophan
5-monoxygenase [Energy metabolism, Amino acids and
amines].
Length = 248
Score = 31.0 bits (70), Expect = 2.1
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 599 VASFLYHQEKMNILVEPDV-HDIFARIP 625
V ++L E+++ L EPD+ HDIF +P
Sbjct: 93 VTTWLRTPEELDYLQEPDIFHDIFGHVP 120
>gnl|CDD|241196 cd12752, RRM1_RBM5, RNA recognition motif 1 in vertebrate
RNA-binding protein 5 (RBM5). This subgroup corresponds
to the RRM1 of RBM5, also termed protein G15, or
putative tumor suppressor LUCA15, or renal carcinoma
antigen NY-REN-9, a known modulator of apoptosis. It may
also act as a tumor suppressor or an RNA splicing
factor. RBM5 shows high sequence similarity to
RNA-binding protein 6 (RBM6 or NY-LU-12 or g16 or
DEF-3). Both, RBM5 and RBM6, specifically bind poly(G)
RNA. They contain two RNA recognition motifs (RRMs),
also termed RBDs (RNA binding domains) or RNPs
(ribonucleoprotein domains), two C2H2-type zinc fingers,
a nuclear localization signal, and a G-patch/D111
domain. .
Length = 87
Score = 29.2 bits (65), Expect = 2.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 626 GFGFVQTFYLQDTSDLHERVDFVACLGGDGVILHASN 662
GF FV+ ++LQD + E + G + +H SN
Sbjct: 49 GFAFVEFYHLQDATSWMEANQKKLVIQGKTIAMHYSN 85
>gnl|CDD|239297 cd02999, PDI_a_ERp44_like, PDIa family, endoplasmic reticulum
protein 44 (ERp44)-like subfamily; composed of
uncharacterized PDI-like eukaryotic proteins containing
only one redox active TRX (a) domain with a CXXS motif,
similar to ERp44. CXXS is still a redox active motif;
however, the mixed disulfide formed with the substrate
is more stable than those formed by CXXC motif proteins.
PDI-related proteins are usually involved in the
oxidative protein folding in the ER by acting as
catalysts and folding assistants. ERp44 is involved in
thiol-mediated retention in the ER.
Length = 100
Score = 29.2 bits (66), Expect = 2.8
Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 788 HPNVPCMLF-TPICPHSLSFRPV 809
+ +LF CP S SFRP
Sbjct: 17 REDYTAVLFYASWCPFSASFRPH 39
>gnl|CDD|221173 pfam11702, DUF3295, Protein of unknown function (DUF3295). This
family is conserved in fungi but the function is not
known.
Length = 509
Score = 31.1 bits (70), Expect = 3.0
Identities = 36/164 (21%), Positives = 52/164 (31%), Gaps = 12/164 (7%)
Query: 442 HQNLPAGSEKSSDNNGYVSAGCSTNGFDRGDRS-SMTEANLLTSVTKNLDEQVISSSVRD 500
S ++ + S ST + D S S + A TSV + ISSS R
Sbjct: 116 QALESTESTSTTSADCNDSEQSSTPNLNSSDTSTSSSGALPSTSVVRGFSPSHISSSYRS 175
Query: 501 VQRSNGKPSNSGDDDLGPIVGNMCASSTGVVRVQSRKKAEMFLVRTDGFSCNREKVTESS 560
+ N PS P ++ +KK MF + + E E
Sbjct: 176 TAQLNKAPS--------PTKSAEPTAAPQAKPELPKKKQAMFTLGGSS-GDDDEDSFEDR 226
Query: 561 LAFTHPSTQQQMLMWKT--TPRTVLVLKKPGPALMEEAKEVASF 602
++ P L K P+LM K+ ASF
Sbjct: 227 MSSQDPKRSSLPKPKPKMFQLGGSDELGKSLPSLMSPRKKTASF 270
>gnl|CDD|182971 PRK11112, PRK11112, tRNA pseudouridine synthase C; Provisional.
Length = 257
Score = 30.8 bits (70), Expect = 3.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 518 PIVGNMCASSTGVVRVQSRKKAEMFLVRTDGFSCNREKVTESSLAFTHPSTQQQMLM 574
PI+G+ + G +R Q+R AE F C+R + S L+ THP T + + +
Sbjct: 174 PIIGD---TKHGDLR-QNRSLAE-------HFGCSRLMLHASELSLTHPFTGEPLTI 219
>gnl|CDD|239464 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hydroxylase
(pro_PheOH); a member of the biopterin-dependent
aromatic amino acid hydroxylase family of non-heme,
iron(II)-dependent enzymes that also includes the
eukaryotic proteins, phenylalanine-4-hydroxylase
(eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan
hydroxylase (TrpOH). PheOH catalyzes the hydroxylation
of L-Phe to L-tyrosine (L-Tyr). It uses
(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the
physiological electron donor.
Length = 228
Score = 30.3 bits (69), Expect = 3.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 598 EVASFLYHQEKMNILVEPDV-HDIFARIP 625
V +F+ E+++ L EPD+ HDIF +P
Sbjct: 92 PVTNFIRRPEELDYLQEPDIFHDIFGHVP 120
>gnl|CDD|234751 PRK00411, cdc6, cell division control protein 6; Reviewed.
Length = 394
Score = 30.6 bits (70), Expect = 4.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 180 IVDIRAERVKDNFYEAAIDDAIL 202
I DI +RV++ FY +DD +L
Sbjct: 212 IFDILKDRVEEGFYPGVVDDEVL 234
>gnl|CDD|221392 pfam12043, DUF3527, Domain of unknown function (DUF3527). This
presumed domain is functionally uncharacterized. This
domain is found in eukaryotes. This domain is about 120
amino acids in length. This domain has a conserved
CDCGGWD sequence motif.
Length = 277
Score = 30.1 bits (68), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 496 SSVRDVQRSNGKPSNSGDDD--LGPIVGNMCASS 527
SV + ++ + NS D + G IVG M SS
Sbjct: 53 HSVGERKKKSASWLNSKDKNKCSGLIVGQMQVSS 86
>gnl|CDD|172549 PRK14057, PRK14057, epimerase; Provisional.
Length = 254
Score = 29.7 bits (66), Expect = 5.6
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 611 ILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGD----GVILHASNLFRG 666
IL + +V + A PG+G +SDLHERV + CL GD +I+ +L +
Sbjct: 151 ILSDVEVIQLLAVNPGYG-----SKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQD 205
Query: 667 AVPPVIS 673
+P +I+
Sbjct: 206 QLPSLIA 212
>gnl|CDD|237020 PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed.
Length = 275
Score = 29.8 bits (68), Expect = 6.4
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 599 VASFLYHQEKMNILVEPDV-HDIFARIP 625
VA+F+ E+++ L EPD+ HD+F +P
Sbjct: 109 VATFIRRPEELDYLQEPDIFHDVFGHVP 136
>gnl|CDD|215840 pfam00291, PALP, Pyridoxal-phosphate dependent enzyme. Members of
this family are all pyridoxal-phosphate dependent
enzymes. This family includes: serine dehydratase
EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16,
tryptophan synthase beta chain EC:4.2.1.20, threonine
synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8
P11096, cystathionine beta-synthase EC:4.2.1.22,
1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.
Length = 295
Score = 29.7 bits (67), Expect = 6.8
Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 761 KVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTP 798
+G V+ A+ +G+T + AA + + + + P
Sbjct: 48 LERGATVVEAS-SGNTGRALAAAAARL--GLKVTIVVP 82
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional.
Length = 880
Score = 30.0 bits (68), Expect = 7.4
Identities = 32/192 (16%), Positives = 78/192 (40%), Gaps = 19/192 (9%)
Query: 161 GGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT 220
G ++TEE K L+E+ + I E + I++ + EL ++ ++
Sbjct: 442 GRELTEEHRKELLEEYTAELKRIEKELKE-------IEEKERKLRKELRELEKVLKKESE 494
Query: 221 MEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLL 280
+ ++++ A + +K L ++ E + + + ++ + + +I L
Sbjct: 495 LIKLKELAEQLKELEEK-LKKYNLEELEKKAEEYEKLKEKLIKLKGEIKS--------LK 545
Query: 281 KDSTRTRKLKASAGKFLLEEKYETVKENQDEIQTKNGVFGFGLSVDMDKRNQS-NGAYKG 339
K+ + +LK LE+K + ++E E+ + GF ++++R + Y
Sbjct: 546 KELEKLEELKKK--LAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNE 603
Query: 340 LSSVEGVESAKE 351
++ E E
Sbjct: 604 YLELKDAEKELE 615
>gnl|CDD|182461 PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.
Length = 256
Score = 28.9 bits (65), Expect = 9.9
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 107 WRKLQRLKNVCYDSGFP----RGDDYPIHTLFANW 137
WR + L VCYD FP +DY + ANW
Sbjct: 131 WRGWRILPLVCYDLRFPVWSRNRNDYDLALYVANW 165
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.133 0.391
Gapped
Lambda K H
0.267 0.0656 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 44,408,715
Number of extensions: 4326859
Number of successful extensions: 3594
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3556
Number of HSP's successfully gapped: 49
Length of query: 887
Length of database: 10,937,602
Length adjustment: 106
Effective length of query: 781
Effective length of database: 6,236,078
Effective search space: 4870376918
Effective search space used: 4870376918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.2 bits)