Query 002736
Match_columns 886
No_of_seqs 756 out of 6121
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 06:04:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 5.4E-91 1.2E-95 851.6 71.3 741 49-886 47-793 (793)
2 KOG0271 Notchless-like WD40 re 100.0 1.4E-44 3.1E-49 366.0 28.9 312 533-884 127-479 (480)
3 KOG0271 Notchless-like WD40 re 100.0 1.1E-42 2.3E-47 352.4 27.3 286 562-885 109-438 (480)
4 KOG0272 U4/U6 small nuclear ri 100.0 1.9E-42 4E-47 355.7 24.5 284 565-884 172-458 (459)
5 KOG0272 U4/U6 small nuclear ri 100.0 8.8E-40 1.9E-44 336.0 20.7 264 535-828 189-458 (459)
6 KOG0279 G protein beta subunit 100.0 9.3E-37 2E-41 298.6 32.8 297 562-885 9-312 (315)
7 KOG0615 Serine/threonine prote 100.0 5.3E-40 1.2E-44 339.9 6.9 208 27-330 225-445 (475)
8 KOG0286 G-protein beta subunit 100.0 2.8E-36 6.2E-41 296.7 31.7 282 565-884 52-343 (343)
9 KOG0265 U5 snRNP-specific prot 100.0 5.6E-36 1.2E-40 295.9 28.1 291 562-884 41-336 (338)
10 KOG0581 Mitogen-activated prot 100.0 2.9E-38 6.2E-43 325.8 9.5 208 27-330 126-343 (364)
11 KOG0284 Polyadenylation factor 100.0 9.8E-37 2.1E-41 312.0 18.7 280 568-884 96-378 (464)
12 KOG0273 Beta-transducin family 100.0 6.7E-35 1.5E-39 303.6 31.9 309 536-885 194-522 (524)
13 KOG0286 G-protein beta subunit 100.0 7.5E-35 1.6E-39 286.7 29.9 273 533-828 67-343 (343)
14 KOG0315 G-protein beta subunit 100.0 2.4E-34 5.3E-39 276.9 29.3 275 537-838 14-296 (311)
15 KOG0315 G-protein beta subunit 100.0 3.4E-34 7.4E-39 275.9 27.8 275 580-885 10-287 (311)
16 KOG0263 Transcription initiati 100.0 1.3E-34 2.9E-39 320.1 27.4 290 567-874 377-703 (707)
17 KOG0661 MAPK related serine/th 100.0 7.9E-37 1.7E-41 321.8 9.3 209 27-329 57-298 (538)
18 KOG0285 Pleiotropic regulator 100.0 3E-34 6.6E-39 288.8 26.8 290 563-884 146-437 (460)
19 KOG0591 NIMA (never in mitosis 100.0 2.4E-36 5.3E-41 297.6 10.5 195 29-316 69-275 (375)
20 KOG0295 WD40 repeat-containing 100.0 2.5E-34 5.4E-39 290.8 24.4 284 564-885 104-405 (406)
21 KOG0598 Ribosomal protein S6 k 100.0 5.9E-36 1.3E-40 308.8 11.4 205 30-330 77-289 (357)
22 KOG0588 Serine/threonine prote 100.0 1.6E-35 3.5E-40 322.7 13.3 209 24-330 58-271 (786)
23 KOG0645 WD40 repeat protein [G 100.0 1.4E-32 3.1E-37 268.2 31.4 293 564-886 10-311 (312)
24 KOG0575 Polo-like serine/threo 100.0 2.8E-35 6E-40 320.6 13.3 201 29-327 69-274 (592)
25 KOG0592 3-phosphoinositide-dep 100.0 2.9E-35 6.3E-40 314.7 11.9 211 36-330 132-346 (604)
26 KOG0318 WD40 repeat stress pro 100.0 4.3E-32 9.3E-37 286.0 35.2 320 535-885 162-601 (603)
27 KOG0593 Predicted protein kina 100.0 2.1E-35 4.6E-40 293.9 8.8 206 28-327 51-289 (396)
28 KOG0273 Beta-transducin family 100.0 6.2E-33 1.3E-37 289.0 27.3 288 565-885 175-481 (524)
29 KOG0291 WD40-repeat-containing 100.0 6E-32 1.3E-36 295.3 35.4 319 536-885 280-611 (893)
30 KOG0277 Peroxisomal targeting 100.0 4.9E-33 1.1E-37 268.8 23.3 283 572-884 12-307 (311)
31 KOG0660 Mitogen-activated prot 100.0 2.9E-35 6.3E-40 302.3 8.1 225 22-335 65-323 (359)
32 KOG0616 cAMP-dependent protein 100.0 9.6E-35 2.1E-39 289.0 10.8 197 33-329 99-304 (355)
33 KOG0605 NDR and related serine 100.0 1E-34 2.2E-39 311.2 11.6 258 22-330 187-453 (550)
34 KOG0198 MEKK and related serin 100.0 6E-35 1.3E-39 307.7 9.7 216 26-330 62-284 (313)
35 KOG0600 Cdc2-related protein k 100.0 2.1E-34 4.6E-39 305.8 12.9 214 27-331 165-409 (560)
36 KOG0583 Serine/threonine prote 100.0 4E-34 8.6E-39 314.5 14.3 201 30-327 71-280 (370)
37 KOG0284 Polyadenylation factor 100.0 1.1E-33 2.4E-38 289.7 15.6 271 533-832 108-382 (464)
38 KOG0276 Vesicle coat complex C 100.0 5E-32 1.1E-36 290.0 28.6 283 564-882 9-295 (794)
39 cd00200 WD40 WD40 domain, foun 100.0 5.4E-31 1.2E-35 281.2 36.9 283 564-884 5-289 (289)
40 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-33 2.3E-38 273.4 13.5 197 34-327 66-272 (355)
41 KOG0319 WD40-repeat-containing 100.0 4.7E-32 1E-36 296.3 27.9 311 536-884 296-617 (775)
42 KOG0663 Protein kinase PITSLRE 100.0 3.3E-34 7.3E-39 289.1 9.5 211 30-332 127-371 (419)
43 KOG0295 WD40 repeat-containing 100.0 2.3E-32 4.9E-37 276.7 22.6 265 537-828 124-404 (406)
44 KOG0263 Transcription initiati 100.0 2.4E-32 5.2E-37 302.3 24.4 239 616-885 377-648 (707)
45 KOG0578 p21-activated serine/t 100.0 8.2E-34 1.8E-38 306.7 12.4 205 28-329 320-530 (550)
46 KOG0659 Cdk activating kinase 100.0 1.3E-33 2.9E-38 276.9 11.7 209 31-333 54-292 (318)
47 KOG0279 G protein beta subunit 100.0 2.4E-31 5.3E-36 260.7 27.2 241 612-885 10-261 (315)
48 KOG0319 WD40-repeat-containing 100.0 1.4E-31 3E-36 292.7 28.3 314 536-885 120-576 (775)
49 KOG0610 Putative serine/threon 100.0 4.7E-33 1E-37 289.1 15.3 268 24-333 123-403 (459)
50 KOG0316 Conserved WD40 repeat- 100.0 2.6E-31 5.7E-36 253.9 25.6 278 564-880 13-294 (307)
51 KOG0296 Angio-associated migra 100.0 5.5E-31 1.2E-35 266.9 29.4 304 537-885 80-397 (399)
52 KOG0313 Microtubule binding pr 100.0 2.4E-31 5.3E-36 270.5 26.7 270 534-829 116-417 (423)
53 KOG0281 Beta-TrCP (transducin 100.0 1.2E-32 2.6E-37 275.8 16.9 282 567-886 196-477 (499)
54 KOG0266 WD40 repeat-containing 100.0 8.2E-31 1.8E-35 299.2 33.5 285 566-885 157-453 (456)
55 KOG0282 mRNA splicing factor [ 100.0 4.4E-32 9.6E-37 284.0 19.8 290 563-884 209-503 (503)
56 KOG0594 Protein kinase PCTAIRE 100.0 5.7E-33 1.2E-37 287.0 12.3 219 20-331 55-311 (323)
57 KOG0277 Peroxisomal targeting 100.0 3.1E-31 6.7E-36 256.4 21.7 267 542-829 37-308 (311)
58 KOG0595 Serine/threonine-prote 100.0 5.5E-33 1.2E-37 288.8 10.1 208 26-329 57-275 (429)
59 KOG0192 Tyrosine kinase specif 100.0 1.5E-32 3.1E-37 299.0 13.5 205 22-321 85-298 (362)
60 KOG4721 Serine/threonine prote 100.0 5.1E-32 1.1E-36 288.9 15.4 204 24-323 158-365 (904)
61 KOG0293 WD40 repeat-containing 100.0 9.2E-31 2E-35 268.1 23.7 287 563-885 219-512 (519)
62 KOG0772 Uncharacterized conser 100.0 1E-30 2.2E-35 274.6 24.3 291 564-883 163-484 (641)
63 KOG0694 Serine/threonine prote 100.0 1.6E-32 3.4E-37 302.4 10.7 208 25-331 417-633 (694)
64 KOG0585 Ca2+/calmodulin-depend 100.0 1.7E-32 3.8E-37 288.5 9.7 212 29-328 159-378 (576)
65 KOG1407 WD40 repeat protein [F 100.0 7.1E-30 1.5E-34 248.0 26.9 287 561-884 13-309 (313)
66 KOG0611 Predicted serine/threo 100.0 2.7E-32 5.8E-37 280.3 10.6 198 31-327 106-308 (668)
67 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-31 2.7E-36 310.1 16.3 199 55-327 669-876 (1351)
68 KOG0604 MAP kinase-activated p 100.0 7.6E-32 1.7E-36 268.0 12.4 213 24-329 102-329 (400)
69 KOG0596 Dual specificity; seri 100.0 3.4E-32 7.4E-37 290.9 10.4 223 15-332 398-637 (677)
70 KOG0599 Phosphorylase kinase g 100.0 2.2E-32 4.8E-37 268.0 7.7 195 35-326 80-287 (411)
71 KOG0318 WD40 repeat stress pro 100.0 8.3E-29 1.8E-33 261.3 33.9 315 537-885 75-559 (603)
72 KOG0282 mRNA splicing factor [ 100.0 7.9E-31 1.7E-35 274.6 17.8 266 535-828 229-503 (503)
73 KOG0291 WD40-repeat-containing 100.0 1E-28 2.2E-33 270.2 34.7 325 533-885 157-549 (893)
74 KOG0597 Serine-threonine prote 100.0 6.4E-32 1.4E-36 288.6 9.4 200 32-328 55-257 (808)
75 KOG0281 Beta-TrCP (transducin 100.0 3.6E-31 7.8E-36 265.3 14.1 267 535-835 209-482 (499)
76 KOG0582 Ste20-like serine/thre 100.0 1.7E-31 3.7E-36 279.6 10.6 216 22-329 70-300 (516)
77 KOG0658 Glycogen synthase kina 100.0 3.3E-32 7.1E-37 280.3 4.1 214 27-331 66-315 (364)
78 KOG0292 Vesicle coat complex C 100.0 3.3E-29 7.3E-34 277.3 27.5 283 567-885 8-320 (1202)
79 KOG0201 Serine/threonine prote 100.0 3.3E-32 7.1E-37 285.1 3.1 207 27-328 60-269 (467)
80 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-30 3.9E-35 285.2 16.9 195 37-328 95-299 (382)
81 KOG0589 Serine/threonine prote 100.0 1.9E-31 4.1E-36 287.8 8.9 206 27-327 52-263 (426)
82 cd05571 STKc_PKB Catalytic dom 100.0 5.7E-31 1.2E-35 289.7 12.5 202 30-328 47-257 (323)
83 KOG0266 WD40 repeat-containing 100.0 1E-28 2.2E-33 282.0 30.5 271 536-830 174-454 (456)
84 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-30 2.3E-35 283.1 13.4 203 31-325 57-290 (290)
85 KOG0285 Pleiotropic regulator 100.0 4.7E-29 1E-33 251.4 24.0 271 533-830 163-439 (460)
86 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9E-31 1.9E-35 285.6 12.0 211 29-333 54-299 (303)
87 KOG0667 Dual-specificity tyros 100.0 1.4E-30 3E-35 287.5 12.5 193 39-328 249-508 (586)
88 KOG0306 WD40-repeat-containing 100.0 1.5E-28 3.2E-33 268.8 27.9 290 562-885 367-663 (888)
89 KOG0276 Vesicle coat complex C 100.0 5.9E-29 1.3E-33 266.6 24.3 239 616-884 12-255 (794)
90 KOG4717 Serine/threonine prote 100.0 2.4E-30 5.3E-35 273.0 13.0 199 35-330 74-278 (864)
91 cd05585 STKc_YPK1_like Catalyt 100.0 2E-30 4.3E-35 284.0 12.8 203 29-328 44-253 (312)
92 KOG0313 Microtubule binding pr 100.0 1.6E-28 3.6E-33 250.0 25.7 287 565-884 102-416 (423)
93 KOG0268 Sof1-like rRNA process 100.0 1.2E-29 2.5E-34 256.6 17.1 270 534-835 80-350 (433)
94 KOG0580 Serine/threonine prote 100.0 2.1E-30 4.6E-35 250.9 11.1 201 28-327 72-278 (281)
95 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.1E-30 4.5E-35 280.5 12.2 202 30-325 55-288 (288)
96 cd05612 STKc_PRKX_like Catalyt 100.0 3.2E-30 6.9E-35 279.5 13.5 199 30-328 53-260 (291)
97 KOG0640 mRNA cleavage stimulat 100.0 5.4E-29 1.2E-33 246.5 20.7 295 564-884 108-424 (430)
98 KOG0288 WD40 repeat protein Ti 100.0 1.5E-29 3.3E-34 259.9 17.0 287 565-884 172-459 (459)
99 PTZ00426 cAMP-dependent protei 100.0 4.1E-30 8.9E-35 284.3 13.7 199 30-328 83-290 (340)
100 PTZ00263 protein kinase A cata 100.0 4.5E-30 9.7E-35 283.2 13.9 199 30-328 70-277 (329)
101 cd05593 STKc_PKB_gamma Catalyt 100.0 4.2E-30 9.1E-35 283.2 13.1 202 30-328 47-257 (328)
102 cd05590 STKc_nPKC_eta Catalyti 100.0 6E-30 1.3E-34 281.1 14.3 197 35-328 53-259 (320)
103 cd05595 STKc_PKB_beta Catalyti 100.0 6.2E-30 1.3E-34 281.4 14.3 202 30-328 47-257 (323)
104 KOG0579 Ste20-like serine/thre 100.0 5.4E-30 1.2E-34 275.8 13.2 209 28-330 79-297 (1187)
105 KOG0310 Conserved WD40 repeat- 100.0 1.8E-28 3.9E-33 257.6 24.3 280 567-883 25-306 (487)
106 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.2E-30 7E-35 285.8 11.7 213 29-330 50-298 (338)
107 cd00200 WD40 WD40 domain, foun 100.0 3.4E-27 7.4E-32 251.7 34.4 265 535-828 23-289 (289)
108 PHA03212 serine/threonine kina 100.0 3.4E-30 7.4E-35 289.8 11.2 210 28-331 133-385 (391)
109 KOG0643 Translation initiation 100.0 6E-28 1.3E-32 235.2 25.0 300 564-884 6-315 (327)
110 cd07863 STKc_CDK4 Catalytic do 100.0 9.8E-30 2.1E-34 275.3 13.8 203 31-325 55-288 (288)
111 KOG0275 Conserved WD40 repeat- 100.0 4.9E-29 1.1E-33 247.6 16.9 288 565-884 210-507 (508)
112 cd05631 STKc_GRK4 Catalytic do 100.0 1E-29 2.2E-34 274.7 13.2 206 29-329 51-268 (285)
113 cd07848 STKc_CDKL5 Catalytic d 100.0 1.3E-29 2.8E-34 274.2 13.9 203 30-325 52-287 (287)
114 cd05591 STKc_nPKC_epsilon Cata 100.0 1.4E-29 3.1E-34 278.4 14.5 196 36-328 54-260 (321)
115 KOG0197 Tyrosine kinases [Sign 100.0 7.6E-30 1.6E-34 276.0 11.9 204 22-320 247-455 (468)
116 cd05620 STKc_nPKC_delta Cataly 100.0 1.6E-29 3.4E-34 277.3 14.6 197 35-328 53-254 (316)
117 KOG0264 Nucleosome remodeling 100.0 3.6E-28 7.8E-33 253.9 23.6 261 565-830 121-404 (422)
118 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.3E-29 2.9E-34 282.4 13.8 231 31-328 54-291 (350)
119 cd05594 STKc_PKB_alpha Catalyt 100.0 5E-30 1.1E-34 282.5 10.0 202 30-328 47-258 (325)
120 KOG0612 Rho-associated, coiled 100.0 3.6E-30 7.8E-35 295.7 9.0 212 19-327 118-343 (1317)
121 PHA03209 serine/threonine kina 100.0 1.9E-29 4.2E-34 281.3 14.5 203 30-327 109-356 (357)
122 KOG0645 WD40 repeat protein [G 100.0 3.3E-27 7.3E-32 230.7 27.9 273 536-830 30-311 (312)
123 cd05592 STKc_nPKC_theta_delta 100.0 2.2E-29 4.9E-34 276.0 14.5 197 35-328 53-254 (316)
124 cd05614 STKc_MSK2_N N-terminal 100.0 2.1E-29 4.6E-34 278.5 14.1 198 36-328 63-273 (332)
125 cd05628 STKc_NDR1 Catalytic do 100.0 2.5E-29 5.5E-34 281.2 14.8 237 31-328 54-299 (363)
126 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.1E-29 4.6E-34 278.6 14.0 199 31-328 54-263 (333)
127 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-29 4.7E-34 276.6 14.0 208 29-325 49-317 (317)
128 cd05588 STKc_aPKC Catalytic do 100.0 2.4E-29 5.3E-34 277.4 14.3 197 36-328 54-268 (329)
129 cd05619 STKc_nPKC_theta Cataly 100.0 2.9E-29 6.2E-34 275.1 14.7 198 35-329 53-255 (316)
130 cd05584 STKc_p70S6K Catalytic 100.0 2.8E-29 6.1E-34 276.2 14.5 201 31-328 53-262 (323)
131 PTZ00036 glycogen synthase kin 100.0 1.3E-29 2.8E-34 289.6 12.1 211 28-329 109-358 (440)
132 cd05575 STKc_SGK Catalytic dom 100.0 2.4E-29 5.2E-34 276.9 13.7 200 32-328 50-257 (323)
133 KOG0666 Cyclin C-dependent kin 100.0 7.7E-30 1.7E-34 254.8 8.8 212 29-331 78-346 (438)
134 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-29 5.4E-34 276.8 13.8 199 32-328 56-263 (324)
135 KOG0296 Angio-associated migra 100.0 2.7E-27 5.8E-32 240.2 27.1 288 564-885 60-355 (399)
136 PTZ00267 NIMA-related protein 100.0 1.4E-29 2.9E-34 292.8 12.1 206 29-327 116-328 (478)
137 PTZ00283 serine/threonine prot 100.0 4.7E-29 1E-33 288.4 16.0 211 29-328 82-303 (496)
138 cd05618 STKc_aPKC_iota Catalyt 100.0 3.8E-29 8.2E-34 275.8 14.3 198 35-328 53-268 (329)
139 PTZ00284 protein kinase; Provi 100.0 2.9E-29 6.3E-34 290.0 13.9 181 53-328 203-444 (467)
140 cd05596 STKc_ROCK Catalytic do 100.0 3.7E-29 7.9E-34 280.2 14.2 203 31-328 96-310 (370)
141 KOG0603 Ribosomal protein S6 k 100.0 2.8E-29 6E-34 275.6 12.3 194 30-325 368-566 (612)
142 cd05626 STKc_LATS2 Catalytic d 100.0 3.1E-29 6.8E-34 282.3 13.2 250 31-328 54-311 (381)
143 cd05625 STKc_LATS1 Catalytic d 100.0 3.9E-29 8.4E-34 281.8 14.0 249 31-328 54-311 (382)
144 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-29 3.3E-34 279.4 10.4 203 32-328 55-269 (330)
145 KOG0283 WD40 repeat-containing 100.0 1.2E-27 2.6E-32 267.6 25.4 250 562-830 260-576 (712)
146 cd05587 STKc_cPKC Catalytic do 100.0 5.2E-29 1.1E-33 274.3 14.4 201 32-328 54-263 (324)
147 KOG0306 WD40-repeat-containing 100.0 7.3E-27 1.6E-31 255.6 30.6 316 537-885 81-579 (888)
148 cd05599 STKc_NDR_like Catalyti 100.0 4.4E-29 9.4E-34 279.7 13.8 240 31-328 54-302 (364)
149 KOG0690 Serine/threonine prote 100.0 2.7E-29 6E-34 251.7 10.7 187 51-330 237-432 (516)
150 cd07875 STKc_JNK1 Catalytic do 100.0 5.1E-29 1.1E-33 279.0 14.0 204 29-327 74-323 (364)
151 KOG0264 Nucleosome remodeling 100.0 1E-27 2.2E-32 250.6 22.3 264 614-885 121-403 (422)
152 KOG0265 U5 snRNP-specific prot 100.0 2E-27 4.3E-32 235.4 23.3 250 612-885 42-295 (338)
153 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-29 5.5E-34 277.6 11.1 197 36-328 54-259 (330)
154 PLN00181 protein SPA1-RELATED; 100.0 1.1E-26 2.5E-31 284.8 35.6 278 535-829 497-792 (793)
155 cd05621 STKc_ROCK2 Catalytic d 100.0 4.9E-29 1.1E-33 278.8 13.5 203 31-328 96-310 (370)
156 cd05570 STKc_PKC Catalytic dom 100.0 6.8E-29 1.5E-33 272.6 14.3 196 36-328 54-258 (318)
157 cd05604 STKc_SGK3 Catalytic do 100.0 3.7E-29 8E-34 275.6 12.2 200 32-328 50-257 (325)
158 KOG0292 Vesicle coat complex C 100.0 5.8E-27 1.3E-31 259.7 29.3 321 537-879 25-389 (1202)
159 KOG0316 Conserved WD40 repeat- 100.0 2.4E-27 5.1E-32 226.9 22.7 241 615-886 15-257 (307)
160 cd07876 STKc_JNK2 Catalytic do 100.0 5.5E-29 1.2E-33 278.2 13.5 206 28-328 70-321 (359)
161 KOG0584 Serine/threonine prote 100.0 1.5E-29 3.1E-34 276.4 8.5 205 27-328 90-302 (632)
162 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.6E-29 1.2E-33 274.3 13.3 198 36-329 54-267 (327)
163 PHA03211 serine/threonine kina 100.0 4.4E-29 9.5E-34 284.1 12.8 206 30-327 212-460 (461)
164 cd05616 STKc_cPKC_beta Catalyt 100.0 6.2E-29 1.3E-33 273.6 13.4 183 54-329 73-264 (323)
165 KOG0671 LAMMER dual specificit 100.0 3.5E-29 7.5E-34 258.1 10.5 202 53-329 162-413 (415)
166 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.6E-29 1E-33 277.1 12.2 207 28-330 64-306 (343)
167 KOG0310 Conserved WD40 repeat- 100.0 2.2E-27 4.7E-32 249.5 23.9 264 542-832 47-311 (487)
168 KOG0274 Cdc4 and related F-box 100.0 4.9E-27 1.1E-31 267.1 28.8 274 567-885 207-481 (537)
169 KOG1446 Histone H3 (Lys4) meth 100.0 7.6E-26 1.6E-30 226.9 33.6 278 567-883 13-300 (311)
170 cd05629 STKc_NDR_like_fungal C 100.0 7E-29 1.5E-33 279.3 13.5 249 31-328 54-311 (377)
171 KOG4279 Serine/threonine prote 100.0 1.5E-29 3.2E-34 275.2 7.3 203 32-328 626-838 (1226)
172 cd05582 STKc_RSK_N N-terminal 100.0 2.6E-29 5.6E-34 276.0 9.4 204 28-328 48-260 (318)
173 cd05602 STKc_SGK1 Catalytic do 100.0 1E-28 2.2E-33 272.0 13.8 200 32-328 50-257 (325)
174 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.5E-28 3.2E-33 272.5 15.1 195 36-321 69-329 (338)
175 PTZ00421 coronin; Provisional 100.0 4.2E-26 9.2E-31 259.4 35.1 271 570-866 22-314 (493)
176 PHA03207 serine/threonine kina 100.0 6.4E-29 1.4E-33 280.6 12.1 209 28-329 136-382 (392)
177 cd07874 STKc_JNK3 Catalytic do 100.0 6.2E-29 1.3E-33 277.4 11.6 205 29-328 67-317 (355)
178 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-28 2.8E-33 270.8 14.0 200 32-328 50-257 (321)
179 cd06649 PKc_MEK2 Catalytic dom 100.0 1E-28 2.3E-33 272.7 13.1 202 30-329 55-308 (331)
180 cd05598 STKc_LATS Catalytic do 100.0 6.9E-29 1.5E-33 279.3 11.6 245 31-328 54-307 (376)
181 cd05608 STKc_GRK1 Catalytic do 100.0 1.2E-28 2.6E-33 265.5 13.0 204 31-329 46-264 (280)
182 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1E-28 2.2E-33 270.1 12.5 206 30-329 56-293 (309)
183 KOG0268 Sof1-like rRNA process 100.0 8E-28 1.7E-32 243.3 17.6 281 562-884 60-343 (433)
184 KOG0607 MAP kinase-interacting 100.0 5.5E-29 1.2E-33 249.4 9.1 207 34-328 132-367 (463)
185 KOG4645 MAPKKK (MAP kinase kin 100.0 3.5E-30 7.7E-35 299.4 0.7 211 27-328 1283-1500(1509)
186 KOG0275 Conserved WD40 repeat- 100.0 5.5E-28 1.2E-32 240.2 15.9 272 537-828 229-507 (508)
187 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-28 2.4E-33 277.1 12.4 209 29-328 50-294 (372)
188 cd05627 STKc_NDR2 Catalytic do 100.0 9.6E-29 2.1E-33 276.3 11.7 236 32-328 55-299 (360)
189 KOG0665 Jun-N-terminal kinase 100.0 4.3E-29 9.2E-34 251.5 7.8 213 20-326 57-314 (369)
190 KOG0293 WD40 repeat-containing 100.0 4.3E-27 9.4E-32 241.3 22.2 269 536-830 239-513 (519)
191 KOG0577 Serine/threonine prote 100.0 3.2E-29 6.9E-34 268.6 6.5 204 31-333 79-289 (948)
192 cd05623 STKc_MRCK_alpha Cataly 100.0 2.6E-28 5.7E-33 269.6 14.1 204 32-328 55-272 (332)
193 KOG1240 Protein kinase contain 100.0 1.1E-25 2.4E-30 258.0 35.5 321 548-884 1034-1431(1431)
194 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-28 3E-33 265.6 11.3 201 31-325 52-284 (284)
195 cd07867 STKc_CDC2L6 Catalytic 100.0 2.1E-28 4.6E-33 268.7 12.9 208 29-325 49-317 (317)
196 cd05622 STKc_ROCK1 Catalytic d 100.0 3E-28 6.5E-33 272.7 14.3 202 32-328 97-310 (371)
197 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-28 5.4E-33 260.4 13.0 203 31-325 57-263 (263)
198 cd05597 STKc_DMPK_like Catalyt 100.0 4.5E-28 9.8E-33 267.5 15.3 211 23-328 48-272 (331)
199 PHA02988 hypothetical protein; 100.0 2E-28 4.4E-33 264.0 11.8 198 29-321 69-274 (283)
200 KOG0301 Phospholipase A2-activ 100.0 1.8E-26 3.8E-31 251.2 26.7 276 564-885 10-287 (745)
201 KOG0269 WD40 repeat-containing 100.0 2E-27 4.3E-32 261.3 19.5 288 569-881 40-335 (839)
202 PTZ00420 coronin; Provisional 100.0 1.2E-25 2.6E-30 256.5 34.7 249 586-867 50-318 (568)
203 KOG0647 mRNA export protein (c 100.0 4.6E-26 9.9E-31 225.9 26.9 275 567-877 26-315 (347)
204 PLN00034 mitogen-activated pro 100.0 3.2E-28 6.9E-33 271.3 13.2 201 30-329 124-335 (353)
205 cd05607 STKc_GRK7 Catalytic do 100.0 3.8E-28 8.2E-33 261.3 13.1 205 30-329 45-261 (277)
206 cd06637 STKc_TNIK Catalytic do 100.0 5E-28 1.1E-32 259.5 13.9 199 36-325 61-272 (272)
207 KOG0983 Mitogen-activated prot 100.0 5.8E-29 1.3E-33 244.4 5.9 201 32-328 145-355 (391)
208 cd05615 STKc_cPKC_alpha Cataly 100.0 5.9E-28 1.3E-32 265.7 14.6 182 54-328 73-263 (323)
209 cd05605 STKc_GRK4_like Catalyt 100.0 4.4E-28 9.5E-33 261.9 13.3 205 29-329 51-268 (285)
210 cd08529 STKc_FA2-like Catalyti 99.9 9.4E-28 2E-32 254.8 14.9 200 31-325 52-256 (256)
211 KOG0299 U3 snoRNP-associated p 99.9 6E-26 1.3E-30 236.8 27.2 283 565-875 139-444 (479)
212 cd05624 STKc_MRCK_beta Catalyt 99.9 6.5E-28 1.4E-32 266.2 13.1 204 32-328 55-272 (331)
213 cd08223 STKc_Nek4 Catalytic do 99.9 9.1E-28 2E-32 255.1 13.1 202 30-325 51-257 (257)
214 cd06650 PKc_MEK1 Catalytic dom 99.9 5E-28 1.1E-32 267.3 11.3 202 30-328 55-305 (333)
215 PTZ00421 coronin; Provisional 99.9 3E-25 6.4E-30 252.5 34.0 232 564-811 71-314 (493)
216 KOG0274 Cdc4 and related F-box 99.9 1E-25 2.2E-30 256.3 29.8 269 534-838 219-490 (537)
217 PTZ00266 NIMA-related protein 99.9 6.9E-28 1.5E-32 286.4 12.3 205 29-327 63-300 (1021)
218 cd07873 STKc_PCTAIRE1 Catalyti 99.9 1E-27 2.3E-32 261.2 12.8 207 29-329 55-293 (301)
219 KOG0278 Serine/threonine kinas 99.9 1E-26 2.3E-31 224.2 18.0 281 565-885 11-296 (334)
220 cd05630 STKc_GRK6 Catalytic do 99.9 1.1E-27 2.5E-32 258.7 12.7 203 31-328 53-267 (285)
221 KOG0586 Serine/threonine prote 99.9 4.2E-28 9E-33 264.9 9.2 206 27-330 104-314 (596)
222 PHA03390 pk1 serine/threonine- 99.9 1.3E-27 2.8E-32 255.6 12.8 192 36-326 67-266 (267)
223 cd06643 STKc_SLK Catalytic dom 99.9 2.6E-27 5.6E-32 255.5 14.9 204 31-328 55-268 (282)
224 cd05633 STKc_GRK3 Catalytic do 99.9 1.3E-27 2.8E-32 257.4 12.5 199 34-329 53-262 (279)
225 KOG0305 Anaphase promoting com 99.9 1.1E-25 2.3E-30 246.6 27.5 267 537-832 191-463 (484)
226 cd07861 STKc_CDK1_euk Catalyti 99.9 1.5E-27 3.2E-32 257.7 12.9 201 31-325 52-285 (285)
227 cd06644 STKc_STK10_LOK Catalyt 99.9 5.3E-27 1.1E-31 254.5 17.2 207 31-332 62-279 (292)
228 cd07831 STKc_MOK Catalytic dom 99.9 3.2E-27 7E-32 254.6 15.4 195 36-325 56-282 (282)
229 cd06645 STKc_MAP4K3 Catalytic 99.9 1.9E-27 4E-32 254.4 13.3 200 30-324 58-267 (267)
230 PHA03210 serine/threonine kina 99.9 9.5E-28 2.1E-32 278.5 11.9 208 28-328 213-460 (501)
231 PTZ00420 coronin; Provisional 99.9 5E-25 1.1E-29 251.4 33.6 254 539-812 50-318 (568)
232 cd06631 STKc_YSK4 Catalytic do 99.9 1.6E-27 3.4E-32 254.7 12.2 207 30-325 54-265 (265)
233 cd06636 STKc_MAP4K4_6 Catalyti 99.9 2.8E-27 6.2E-32 255.2 14.3 199 36-325 71-282 (282)
234 cd06628 STKc_MAPKKK_Byr2_like 99.9 2.1E-27 4.5E-32 254.0 13.0 207 29-325 57-267 (267)
235 cd06651 STKc_MEKK3 Catalytic d 99.9 1.8E-27 3.9E-32 254.4 12.4 206 30-326 56-265 (266)
236 cd07832 STKc_CCRK Catalytic do 99.9 2.1E-27 4.6E-32 256.6 12.8 203 31-326 52-286 (286)
237 cd08227 PK_STRAD_alpha Pseudok 99.9 1.8E-27 3.9E-32 262.5 12.5 211 31-328 52-313 (327)
238 KOG0669 Cyclin T-dependent kin 99.9 1.4E-27 2.9E-32 232.1 9.9 192 56-333 98-326 (376)
239 cd05574 STKc_phototropin_like 99.9 4.7E-27 1E-31 257.9 15.6 235 30-329 53-296 (316)
240 KOG0986 G protein-coupled rece 99.9 1.6E-27 3.5E-32 249.4 11.0 185 53-329 256-453 (591)
241 KOG0973 Histone transcription 99.9 1.5E-25 3.2E-30 256.7 27.9 290 566-885 11-354 (942)
242 KOG0289 mRNA splicing factor [ 99.9 2.5E-25 5.3E-30 230.1 26.8 282 568-885 219-505 (506)
243 KOG0305 Anaphase promoting com 99.9 1.8E-25 3.9E-30 244.7 27.0 271 574-886 183-461 (484)
244 cd05064 PTKc_EphR_A10 Catalyti 99.9 2.5E-27 5.5E-32 253.3 12.3 200 28-321 56-260 (266)
245 cd06605 PKc_MAPKK Catalytic do 99.9 1.2E-27 2.7E-32 255.3 9.5 201 32-328 53-263 (265)
246 cd06654 STKc_PAK1 Catalytic do 99.9 5E-27 1.1E-31 255.1 14.4 205 31-331 70-279 (296)
247 cd05048 PTKc_Ror Catalytic Dom 99.9 4E-27 8.6E-32 254.1 13.4 199 31-322 61-279 (283)
248 KOG1036 Mitotic spindle checkp 99.9 6.5E-25 1.4E-29 218.9 28.0 272 567-876 12-294 (323)
249 KOG0662 Cyclin-dependent kinas 99.9 1E-27 2.3E-32 221.3 7.5 204 31-328 54-289 (292)
250 KOG4236 Serine/threonine prote 99.9 1.9E-28 4.2E-33 259.3 3.0 217 17-330 604-827 (888)
251 cd06609 STKc_MST3_like Catalyt 99.9 8E-27 1.7E-31 250.5 15.6 203 32-331 53-260 (274)
252 KOG1989 ARK protein kinase fam 99.9 5E-28 1.1E-32 275.8 6.3 214 23-322 81-307 (738)
253 cd05632 STKc_GRK5 Catalytic do 99.9 5.3E-27 1.2E-31 253.4 14.0 205 30-329 52-268 (285)
254 cd06658 STKc_PAK5 Catalytic do 99.9 2.2E-27 4.7E-32 257.4 10.9 206 30-332 71-282 (292)
255 cd06633 STKc_TAO3 Catalytic do 99.9 1.8E-26 3.9E-31 252.8 18.1 202 30-329 73-280 (313)
256 cd05572 STKc_cGK_PKG Catalytic 99.9 6.9E-27 1.5E-31 249.2 14.3 202 31-328 46-258 (262)
257 cd06613 STKc_MAP4K3_like Catal 99.9 5.5E-27 1.2E-31 249.8 13.6 201 30-324 52-262 (262)
258 cd07845 STKc_CDK10 Catalytic d 99.9 6.2E-27 1.3E-31 256.1 14.3 210 30-331 58-299 (309)
259 cd06611 STKc_SLK_like Catalyti 99.9 5.9E-27 1.3E-31 252.4 13.9 203 31-328 55-268 (280)
260 cd06612 STKc_MST1_2 Catalytic 99.9 3.8E-27 8.2E-32 250.1 12.2 207 22-325 44-256 (256)
261 cd07857 STKc_MPK1 Catalytic do 99.9 4.2E-27 9.1E-32 260.1 12.7 208 36-331 60-301 (332)
262 KOG0308 Conserved WD40 repeat- 99.9 1.2E-25 2.5E-30 243.0 23.3 256 566-832 19-287 (735)
263 cd06607 STKc_TAO Catalytic dom 99.9 7.3E-27 1.6E-31 255.3 14.4 202 30-330 67-275 (307)
264 cd06648 STKc_PAK_II Catalytic 99.9 7.3E-27 1.6E-31 252.4 14.1 205 31-332 69-279 (285)
265 cd06655 STKc_PAK2 Catalytic do 99.9 4.7E-27 1E-31 255.3 12.6 203 31-329 69-276 (296)
266 cd07860 STKc_CDK2_3 Catalytic 99.9 1.1E-26 2.3E-31 250.9 15.2 203 29-325 50-284 (284)
267 cd05606 STKc_beta_ARK Catalyti 99.9 7.4E-27 1.6E-31 251.4 13.9 201 32-329 51-262 (278)
268 cd06619 PKc_MKK5 Catalytic dom 99.9 1.3E-26 2.8E-31 249.7 15.7 201 31-332 52-263 (279)
269 cd07841 STKc_CDK7 Catalytic do 99.9 5.9E-27 1.3E-31 254.8 13.2 207 31-331 55-291 (298)
270 KOG0300 WD40 repeat-containing 99.9 4.3E-25 9.4E-30 219.2 25.1 291 563-885 143-475 (481)
271 cd05106 PTKc_CSF-1R Catalytic 99.9 5.5E-27 1.2E-31 262.8 13.3 194 36-321 100-367 (374)
272 cd06652 STKc_MEKK2 Catalytic d 99.9 6.2E-27 1.3E-31 250.1 12.9 206 30-326 56-265 (265)
273 cd06634 STKc_TAO2 Catalytic do 99.9 2.2E-26 4.7E-31 251.6 17.5 205 31-333 68-278 (308)
274 cd07865 STKc_CDK9 Catalytic do 99.9 9.4E-27 2E-31 254.6 14.5 209 30-325 63-310 (310)
275 cd07850 STKc_JNK Catalytic dom 99.9 6.2E-27 1.3E-31 261.0 13.2 204 29-327 66-316 (353)
276 cd05104 PTKc_Kit Catalytic dom 99.9 8.4E-27 1.8E-31 261.6 14.3 194 36-321 97-369 (375)
277 cd06656 STKc_PAK3 Catalytic do 99.9 3.7E-27 8E-32 256.3 11.0 205 30-330 68-277 (297)
278 PF00069 Pkinase: Protein kina 99.9 1.8E-27 3.9E-32 253.2 8.2 201 30-325 50-260 (260)
279 KOG0270 WD40 repeat-containing 99.9 1.3E-25 2.9E-30 233.3 21.7 254 568-836 173-455 (463)
280 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1.6E-26 3.4E-31 249.9 15.6 205 31-331 52-271 (286)
281 cd08221 STKc_Nek9 Catalytic do 99.9 6.9E-27 1.5E-31 248.2 12.6 201 30-325 51-256 (256)
282 cd06632 STKc_MEKK1_plant Catal 99.9 8.2E-27 1.8E-31 247.8 13.0 200 30-325 54-258 (258)
283 cd08220 STKc_Nek8 Catalytic do 99.9 1.5E-26 3.3E-31 245.5 14.8 199 31-325 52-256 (256)
284 cd08217 STKc_Nek2 Catalytic do 99.9 1.2E-26 2.6E-31 247.4 14.1 203 30-325 51-265 (265)
285 cd06615 PKc_MEK Catalytic doma 99.9 1E-26 2.2E-31 254.1 13.8 201 30-328 51-293 (308)
286 cd05054 PTKc_VEGFR Catalytic d 99.9 1.1E-26 2.5E-31 256.7 14.3 196 36-322 69-329 (337)
287 KOG0696 Serine/threonine prote 99.9 7.8E-27 1.7E-31 240.8 11.8 186 52-330 420-614 (683)
288 cd07855 STKc_ERK5 Catalytic do 99.9 6.2E-27 1.3E-31 259.0 11.9 214 30-332 56-304 (334)
289 cd06608 STKc_myosinIII_like Ca 99.9 9E-27 2E-31 249.9 12.7 198 36-325 61-275 (275)
290 cd06639 STKc_myosinIIIB Cataly 99.9 1.6E-26 3.6E-31 250.5 14.9 199 36-326 77-291 (291)
291 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.6E-26 3.4E-31 249.5 14.6 202 33-329 55-268 (283)
292 cd07858 STKc_TEY_MAPK_plant Ca 99.9 4.9E-27 1.1E-31 260.1 10.8 212 28-331 54-300 (337)
293 PLN03225 Serine/threonine-prot 99.9 3.4E-26 7.3E-31 266.8 18.3 189 53-330 206-458 (566)
294 cd06624 STKc_ASK Catalytic dom 99.9 1.5E-26 3.3E-31 247.5 14.1 202 30-325 57-268 (268)
295 KOG0294 WD40 repeat-containing 99.9 1.4E-24 3.1E-29 216.5 26.9 243 563-832 38-283 (362)
296 cd05611 STKc_Rim15_like Cataly 99.9 1.6E-26 3.5E-31 246.1 14.0 196 33-328 52-257 (260)
297 KOG0193 Serine/threonine prote 99.9 1.7E-27 3.6E-32 258.5 6.1 205 21-321 433-648 (678)
298 cd05580 STKc_PKA Catalytic dom 99.9 2.4E-26 5.1E-31 249.1 15.2 199 31-329 54-261 (290)
299 cd06635 STKc_TAO1 Catalytic do 99.9 3.6E-26 7.7E-31 251.0 16.8 202 30-329 77-284 (317)
300 cd05052 PTKc_Abl Catalytic dom 99.9 2.3E-26 5E-31 245.4 14.8 196 32-321 56-257 (263)
301 cd07870 STKc_PFTAIRE2 Catalyti 99.9 1.3E-26 2.8E-31 251.3 12.9 202 30-325 55-291 (291)
302 KOG0647 mRNA export protein (c 99.9 7.6E-25 1.6E-29 217.3 24.0 247 615-884 25-279 (347)
303 KOG0641 WD40 repeat protein [G 99.9 8E-24 1.7E-28 201.1 29.9 291 567-885 31-348 (350)
304 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 3.8E-26 8.2E-31 247.1 16.3 207 30-330 51-274 (287)
305 cd07844 STKc_PCTAIRE_like Cata 99.9 1.1E-26 2.4E-31 251.8 12.0 202 30-325 55-291 (291)
306 cd05058 PTKc_Met_Ron Catalytic 99.9 2.3E-26 5E-31 245.1 14.3 202 31-321 49-254 (262)
307 cd06630 STKc_MEKK1 Catalytic d 99.9 1.9E-26 4E-31 246.7 13.6 207 29-326 54-268 (268)
308 cd05084 PTKc_Fes Catalytic dom 99.9 2.3E-26 5E-31 243.7 14.2 204 23-321 40-248 (252)
309 cd06646 STKc_MAP4K5 Catalytic 99.9 7.7E-27 1.7E-31 249.6 10.6 200 30-324 58-267 (267)
310 cd06640 STKc_MST4 Catalytic do 99.9 2.1E-26 4.6E-31 247.7 14.0 203 29-328 53-259 (277)
311 KOG0608 Warts/lats-like serine 99.9 4.9E-27 1.1E-31 253.7 8.9 252 21-330 674-936 (1034)
312 cd05115 PTKc_Zap-70 Catalytic 99.9 1.4E-26 3.1E-31 246.1 12.5 199 30-321 47-250 (257)
313 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.3E-26 2.7E-31 249.4 12.2 202 29-327 53-258 (277)
314 cd07837 STKc_CdkB_plant Cataly 99.9 2.8E-26 6.1E-31 249.1 15.0 200 36-326 59-295 (295)
315 cd06638 STKc_myosinIIIA Cataly 99.9 2.7E-26 5.8E-31 248.1 14.7 198 36-325 73-286 (286)
316 cd05576 STKc_RPK118_like Catal 99.9 1.5E-26 3.1E-31 242.9 12.1 187 35-325 42-237 (237)
317 cd05108 PTKc_EGFR Catalytic do 99.9 1.9E-26 4.2E-31 253.0 13.7 198 30-321 61-263 (316)
318 cd06659 STKc_PAK6 Catalytic do 99.9 1.4E-26 3.1E-31 251.6 12.5 204 30-330 70-279 (297)
319 cd06629 STKc_MAPKKK_Bck1_like 99.9 3.7E-26 8E-31 245.1 15.4 202 31-325 61-272 (272)
320 cd05096 PTKc_DDR1 Catalytic do 99.9 1.8E-26 3.9E-31 251.9 13.0 198 31-321 72-300 (304)
321 cd05111 PTK_HER3 Pseudokinase 99.9 3.1E-26 6.8E-31 246.7 14.7 198 30-321 61-263 (279)
322 cd05578 STKc_Yank1 Catalytic d 99.9 1.3E-26 2.8E-31 246.5 11.5 199 30-325 52-258 (258)
323 cd05116 PTKc_Syk Catalytic dom 99.9 2.7E-26 5.8E-31 244.0 13.8 198 30-321 48-250 (257)
324 KOG1027 Serine/threonine prote 99.9 3.5E-27 7.5E-32 264.3 7.2 202 33-328 558-773 (903)
325 cd08218 STKc_Nek1 Catalytic do 99.9 3E-26 6.6E-31 243.3 14.1 201 30-325 51-256 (256)
326 cd05114 PTKc_Tec_Rlk Catalytic 99.9 3.3E-26 7.2E-31 243.1 14.3 197 31-321 52-253 (256)
327 cd05113 PTKc_Btk_Bmx Catalytic 99.9 2.6E-26 5.6E-31 244.0 13.4 198 31-322 52-254 (256)
328 KOG0772 Uncharacterized conser 99.9 2.6E-25 5.5E-30 234.1 20.5 284 533-830 179-487 (641)
329 KOG1332 Vesicle coat complex C 99.9 1.5E-25 3.3E-30 215.9 17.3 256 565-830 8-286 (299)
330 cd05609 STKc_MAST Catalytic do 99.9 3.8E-26 8.1E-31 249.4 14.9 218 31-329 54-280 (305)
331 cd05094 PTKc_TrkC Catalytic do 99.9 2.2E-26 4.9E-31 249.4 13.0 199 30-321 59-277 (291)
332 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 2.6E-26 5.6E-31 244.9 13.1 191 31-322 57-260 (262)
333 cd00192 PTKc Catalytic domain 99.9 4.9E-26 1.1E-30 242.1 15.2 197 33-322 51-260 (262)
334 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 3.6E-26 7.7E-31 243.2 14.1 190 32-321 53-255 (258)
335 KOG0695 Serine/threonine prote 99.9 1.6E-26 3.5E-31 232.5 10.6 204 35-335 308-529 (593)
336 cd05059 PTKc_Tec_like Catalyti 99.9 2.4E-26 5.1E-31 244.3 12.6 197 31-321 52-253 (256)
337 cd05093 PTKc_TrkB Catalytic do 99.9 3.5E-26 7.6E-31 247.5 14.0 199 30-321 59-274 (288)
338 cd05091 PTKc_Ror2 Catalytic do 99.9 2.2E-26 4.8E-31 248.3 12.4 199 30-321 60-278 (283)
339 cd06616 PKc_MKK4 Catalytic dom 99.9 3.8E-26 8.2E-31 247.2 14.2 198 36-328 61-273 (288)
340 cd05036 PTKc_ALK_LTK Catalytic 99.9 3.1E-26 6.8E-31 246.4 13.1 199 31-322 62-274 (277)
341 cd07847 STKc_CDKL1_4 Catalytic 99.9 4E-26 8.7E-31 246.6 14.0 201 30-325 52-286 (286)
342 cd05053 PTKc_FGFR Catalytic do 99.9 3.9E-26 8.5E-31 247.7 13.9 194 36-322 74-287 (293)
343 cd07843 STKc_CDC2L1 Catalytic 99.9 3.4E-26 7.3E-31 248.3 13.4 202 31-325 57-293 (293)
344 cd06917 STKc_NAK1_like Catalyt 99.9 5.8E-26 1.3E-30 244.2 15.0 199 35-330 59-263 (277)
345 KOG1539 WD repeat protein [Gen 99.9 1.2E-23 2.6E-28 233.4 33.3 318 536-884 175-646 (910)
346 cd05579 STKc_MAST_like Catalyt 99.9 4E-26 8.7E-31 243.3 13.2 211 31-328 46-263 (265)
347 cd05577 STKc_GRK Catalytic dom 99.9 3.6E-26 7.8E-31 245.9 12.9 203 31-329 46-261 (277)
348 cd07842 STKc_CDK8_like Catalyt 99.9 2.3E-26 4.9E-31 252.4 11.5 208 29-325 53-316 (316)
349 cd05062 PTKc_IGF-1R Catalytic 99.9 3.7E-26 8E-31 245.8 12.8 199 30-321 61-273 (277)
350 cd07880 STKc_p38gamma_MAPK12 C 99.9 3.6E-26 7.8E-31 253.7 13.1 206 30-331 66-307 (343)
351 cd07849 STKc_ERK1_2_like Catal 99.9 2.8E-26 6E-31 254.0 12.2 211 29-330 54-300 (336)
352 cd06626 STKc_MEKK4 Catalytic d 99.9 8E-26 1.7E-30 241.1 15.3 205 30-325 51-264 (264)
353 cd06618 PKc_MKK7 Catalytic dom 99.9 5.9E-26 1.3E-30 246.7 14.5 200 35-329 71-280 (296)
354 KOG1407 WD40 repeat protein [F 99.9 1.3E-24 2.9E-29 211.4 22.2 237 615-882 18-257 (313)
355 cd05090 PTKc_Ror1 Catalytic do 99.9 3.4E-26 7.3E-31 246.9 12.4 200 30-322 59-279 (283)
356 cd05049 PTKc_Trk Catalytic dom 99.9 6.9E-26 1.5E-30 244.0 14.7 197 32-321 62-276 (280)
357 cd05109 PTKc_HER2 Catalytic do 99.9 5.8E-26 1.2E-30 244.6 13.8 197 31-321 62-263 (279)
358 cd08216 PK_STRAD Pseudokinase 99.9 4E-26 8.6E-31 250.3 12.8 213 30-329 51-302 (314)
359 KOG1332 Vesicle coat complex C 99.9 6.3E-25 1.4E-29 211.7 19.3 250 615-884 9-284 (299)
360 cd06623 PKc_MAPKK_plant_like C 99.9 5E-26 1.1E-30 242.6 13.1 202 32-328 53-262 (264)
361 cd07834 STKc_MAPK Catalytic do 99.9 4.1E-26 8.8E-31 252.1 12.7 211 31-331 52-298 (330)
362 KOG1187 Serine/threonine prote 99.9 5.3E-26 1.2E-30 249.7 13.4 203 23-321 118-347 (361)
363 cd05033 PTKc_EphR Catalytic do 99.9 9.1E-26 2E-30 241.2 14.6 199 30-321 57-260 (266)
364 cd05082 PTKc_Csk Catalytic dom 99.9 4.8E-26 1E-30 241.9 12.4 194 31-321 52-251 (256)
365 cd05089 PTKc_Tie1 Catalytic do 99.9 8E-26 1.7E-30 245.8 14.4 190 36-321 61-270 (297)
366 cd05055 PTKc_PDGFR Catalytic d 99.9 7.8E-26 1.7E-30 246.5 14.3 194 36-321 97-296 (302)
367 cd07866 STKc_BUR1 Catalytic do 99.9 9.4E-26 2E-30 246.8 15.0 215 31-325 60-311 (311)
368 KOG0973 Histone transcription 99.9 1.4E-24 3E-29 248.8 24.8 286 536-831 28-356 (942)
369 cd05075 PTKc_Axl Catalytic dom 99.9 8.9E-26 1.9E-30 242.0 14.5 201 31-321 53-266 (272)
370 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 5.1E-26 1.1E-30 245.7 12.6 204 29-321 57-278 (284)
371 cd07838 STKc_CDK4_6_like Catal 99.9 7.8E-26 1.7E-30 244.4 14.1 202 32-325 55-287 (287)
372 cd05101 PTKc_FGFR2 Catalytic d 99.9 9.9E-26 2.1E-30 246.0 14.9 193 36-321 79-291 (304)
373 cd07835 STKc_CDK1_like Catalyt 99.9 8.2E-26 1.8E-30 243.9 14.0 201 31-325 51-283 (283)
374 KOG0278 Serine/threonine kinas 99.9 2.2E-25 4.7E-30 215.1 15.2 267 537-835 33-302 (334)
375 cd05061 PTKc_InsR Catalytic do 99.9 7.7E-26 1.7E-30 244.8 13.8 205 31-328 62-286 (288)
376 cd05105 PTKc_PDGFR_alpha Catal 99.9 7E-26 1.5E-30 255.0 13.8 156 78-321 233-392 (400)
377 cd05118 STKc_CMGC Catalytic do 99.9 7.6E-26 1.6E-30 244.0 13.5 201 31-325 51-283 (283)
378 KOG0643 Translation initiation 99.9 5.5E-24 1.2E-28 207.7 24.9 239 610-878 3-253 (327)
379 cd07879 STKc_p38delta_MAPK13 C 99.9 5.6E-26 1.2E-30 252.1 12.8 205 29-330 65-305 (342)
380 KOG0641 WD40 repeat protein [G 99.9 2.2E-23 4.8E-28 198.1 28.3 258 565-830 86-349 (350)
381 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 5.1E-26 1.1E-30 241.9 11.8 189 31-321 54-256 (259)
382 cd07836 STKc_Pho85 Catalytic d 99.9 5.9E-26 1.3E-30 245.1 12.4 202 30-325 50-284 (284)
383 cd06653 STKc_MEKK3_like_1 Cata 99.9 8.1E-26 1.8E-30 241.3 13.3 206 29-325 55-264 (264)
384 cd07851 STKc_p38 Catalytic dom 99.9 7.4E-26 1.6E-30 251.3 13.3 206 31-331 67-307 (343)
385 KOG0283 WD40 repeat-containing 99.9 1.6E-24 3.4E-29 242.7 23.9 245 615-885 265-575 (712)
386 cd05068 PTKc_Frk_like Catalyti 99.9 1.2E-25 2.5E-30 239.7 14.3 197 31-321 54-256 (261)
387 cd05092 PTKc_TrkA Catalytic do 99.9 8.8E-26 1.9E-30 243.3 13.4 197 32-321 61-276 (280)
388 cd05072 PTKc_Lyn Catalytic dom 99.9 1E-25 2.2E-30 240.0 13.5 197 31-321 54-256 (261)
389 cd05040 PTKc_Ack_like Catalyti 99.9 1.6E-25 3.4E-30 238.0 14.8 202 28-321 46-253 (257)
390 cd05088 PTKc_Tie2 Catalytic do 99.9 9.3E-26 2E-30 246.0 13.3 190 36-321 66-275 (303)
391 cd08225 STKc_Nek5 Catalytic do 99.9 8.4E-26 1.8E-30 239.9 12.7 201 30-325 51-257 (257)
392 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.1E-25 2.4E-30 241.6 13.7 191 31-322 69-272 (274)
393 cd05035 PTKc_Axl_like Catalyti 99.9 1.6E-25 3.5E-30 240.1 14.7 201 31-321 54-267 (273)
394 cd05060 PTKc_Syk_like Catalyti 99.9 1.3E-25 2.7E-30 238.8 13.7 197 31-321 49-250 (257)
395 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 7.6E-26 1.6E-30 244.3 12.2 202 30-328 55-272 (284)
396 cd06610 STKc_OSR1_SPAK Catalyt 99.9 8.4E-26 1.8E-30 241.3 12.3 204 32-325 53-267 (267)
397 KOG0574 STE20-like serine/thre 99.9 7.7E-27 1.7E-31 231.8 3.9 201 37-331 87-292 (502)
398 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.6E-25 3.6E-30 238.4 14.5 195 32-321 56-256 (261)
399 cd06647 STKc_PAK_I Catalytic d 99.9 1.1E-25 2.3E-30 244.3 13.3 204 31-330 69-277 (293)
400 KOG2345 Serine/threonine prote 99.9 2.6E-26 5.6E-31 223.6 7.4 205 35-321 75-295 (302)
401 PLN00009 cyclin-dependent kina 99.9 9.9E-26 2.2E-30 244.7 13.0 206 30-329 53-291 (294)
402 KOG1095 Protein tyrosine kinas 99.9 3.6E-26 7.7E-31 268.6 10.1 201 27-321 744-956 (1025)
403 cd05085 PTKc_Fer Catalytic dom 99.9 1.6E-25 3.4E-30 237.0 14.1 197 31-321 45-246 (250)
404 cd05032 PTKc_InsR_like Catalyt 99.9 1.3E-25 2.7E-30 241.5 13.6 199 30-321 61-273 (277)
405 cd08226 PK_STRAD_beta Pseudoki 99.9 5.2E-26 1.1E-30 251.0 10.9 210 31-327 52-313 (328)
406 cd06614 STKc_PAK Catalytic dom 99.9 9E-26 2E-30 244.0 12.5 203 31-328 68-276 (286)
407 cd05056 PTKc_FAK Catalytic dom 99.9 1.5E-25 3.4E-30 240.0 14.2 197 30-321 59-260 (270)
408 cd07877 STKc_p38alpha_MAPK14 C 99.9 1.4E-25 3E-30 249.2 14.2 206 30-331 68-309 (345)
409 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.7E-25 3.8E-30 245.2 14.8 193 36-321 76-288 (314)
410 cd07854 STKc_MAPK4_6 Catalytic 99.9 1.4E-25 3E-30 249.0 14.1 209 32-330 56-308 (342)
411 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.3E-25 2.8E-30 245.4 13.5 193 36-321 82-294 (307)
412 KOG0614 cGMP-dependent protein 99.9 7.2E-27 1.6E-31 247.1 3.4 184 55-330 493-685 (732)
413 cd05066 PTKc_EphR_A Catalytic 99.9 1E-25 2.2E-30 241.1 12.3 200 30-321 57-261 (267)
414 cd08219 STKc_Nek3 Catalytic do 99.9 9.9E-26 2.1E-30 239.3 12.2 196 32-322 52-252 (255)
415 cd05041 PTKc_Fes_like Catalyti 99.9 1.6E-25 3.4E-30 237.1 13.6 205 22-321 38-247 (251)
416 cd08215 STKc_Nek Catalytic dom 99.9 1.8E-25 3.9E-30 237.2 14.1 200 31-325 52-258 (258)
417 KOG0300 WD40 repeat-containing 99.9 3.2E-24 6.9E-29 213.1 21.8 278 538-833 165-479 (481)
418 PTZ00024 cyclin-dependent prot 99.9 1.2E-25 2.6E-30 248.9 13.2 220 30-331 72-322 (335)
419 cd06641 STKc_MST3 Catalytic do 99.9 1.9E-25 4.2E-30 240.2 14.4 201 31-328 55-259 (277)
420 cd05047 PTKc_Tie Catalytic dom 99.9 1.6E-25 3.5E-30 239.9 13.7 190 36-321 54-263 (270)
421 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.4E-25 3.1E-30 238.8 13.2 196 31-321 54-255 (260)
422 cd06657 STKc_PAK4 Catalytic do 99.9 1.5E-25 3.3E-30 242.9 13.5 205 30-331 69-279 (292)
423 cd05071 PTKc_Src Catalytic dom 99.9 1.4E-25 3E-30 239.3 12.9 196 31-321 54-255 (262)
424 cd05122 PKc_STE Catalytic doma 99.9 2.2E-25 4.7E-30 235.5 14.3 198 31-324 50-253 (253)
425 cd07833 STKc_CDKL Catalytic do 99.9 2.4E-25 5.1E-30 240.8 14.8 201 32-325 54-288 (288)
426 cd07830 STKc_MAK_like Catalyti 99.9 1.5E-25 3.3E-30 241.8 13.1 201 30-325 49-283 (283)
427 cd06606 STKc_MAPKKK Catalytic 99.9 1.7E-25 3.8E-30 237.3 13.4 204 31-325 52-260 (260)
428 cd07852 STKc_MAPK15 Catalytic 99.9 1.2E-25 2.6E-30 249.1 12.7 212 29-329 57-302 (337)
429 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 1.6E-25 3.4E-30 241.7 13.3 200 31-321 59-276 (283)
430 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.9E-25 4.1E-30 239.0 13.6 199 31-321 59-262 (268)
431 PF07714 Pkinase_Tyr: Protein 99.9 4.1E-26 9E-31 242.8 8.0 199 30-321 53-257 (259)
432 cd07864 STKc_CDK12 Catalytic d 99.9 1.9E-25 4.2E-30 243.4 13.4 205 30-325 58-302 (302)
433 cd05051 PTKc_DDR Catalytic dom 99.9 1.9E-25 4E-30 242.8 13.2 198 31-321 72-292 (296)
434 cd05065 PTKc_EphR_B Catalytic 99.9 3E-25 6.5E-30 237.6 14.6 201 31-321 58-263 (269)
435 KOG0640 mRNA cleavage stimulat 99.9 2.4E-24 5.3E-29 213.6 19.6 219 610-841 105-346 (430)
436 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.5E-25 5.5E-30 246.1 14.3 193 36-321 76-288 (334)
437 cd07846 STKc_CDKL2_3 Catalytic 99.9 1.5E-25 3.2E-30 242.3 11.9 199 31-325 53-286 (286)
438 cd05069 PTKc_Yes Catalytic dom 99.9 2.6E-25 5.6E-30 236.8 13.6 196 31-321 54-255 (260)
439 KOG0194 Protein tyrosine kinas 99.9 5.3E-26 1.2E-30 250.4 8.5 200 28-321 211-415 (474)
440 cd05103 PTKc_VEGFR2 Catalytic 99.9 3E-25 6.5E-30 246.3 14.6 196 36-322 69-335 (343)
441 cd08222 STKc_Nek11 Catalytic d 99.9 1.4E-25 3E-30 238.9 11.3 200 30-325 54-260 (260)
442 KOG0639 Transducin-like enhanc 99.9 2.5E-24 5.4E-29 225.5 20.2 292 558-886 409-704 (705)
443 cd06627 STKc_Cdc7_like Catalyt 99.9 2.9E-25 6.4E-30 235.1 13.6 198 32-325 53-254 (254)
444 cd05042 PTKc_Aatyk Catalytic d 99.9 2.7E-25 5.9E-30 237.9 13.4 198 31-321 48-265 (269)
445 smart00219 TyrKc Tyrosine kina 99.9 2E-25 4.4E-30 237.0 12.0 204 22-321 47-256 (258)
446 cd07829 STKc_CDK_like Catalyti 99.9 3.1E-25 6.8E-30 239.0 13.6 201 31-325 51-282 (282)
447 cd07840 STKc_CDK9_like Catalyt 99.9 3.5E-25 7.5E-30 239.3 13.9 203 31-325 51-287 (287)
448 cd05112 PTKc_Itk Catalytic dom 99.9 2.6E-25 5.6E-30 236.2 12.6 197 31-321 52-253 (256)
449 cd05050 PTKc_Musk Catalytic do 99.9 2E-25 4.3E-30 241.6 11.9 199 30-321 60-284 (288)
450 cd05045 PTKc_RET Catalytic dom 99.9 3.2E-25 6.9E-30 240.2 13.5 199 30-321 55-281 (290)
451 cd05086 PTKc_Aatyk2 Catalytic 99.9 5.1E-25 1.1E-29 235.7 14.9 196 33-321 50-264 (268)
452 cd05097 PTKc_DDR_like Catalyti 99.9 2.6E-25 5.6E-30 241.6 12.8 199 31-321 70-291 (295)
453 cd08228 STKc_Nek6 Catalytic do 99.9 3.4E-25 7.5E-30 236.8 13.5 198 30-321 54-260 (267)
454 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 3.7E-25 8.1E-30 236.4 13.5 197 31-321 55-260 (267)
455 KOG1026 Nerve growth factor re 99.9 5.9E-26 1.3E-30 257.5 7.5 204 22-320 535-756 (774)
456 cd05083 PTKc_Chk Catalytic dom 99.9 3.1E-25 6.7E-30 235.3 12.6 192 31-321 52-249 (254)
457 cd05110 PTKc_HER4 Catalytic do 99.9 3.4E-25 7.5E-30 241.6 13.3 198 30-321 61-263 (303)
458 PHA02882 putative serine/threo 99.9 2.1E-25 4.6E-30 242.0 11.5 201 34-321 79-291 (294)
459 cd08229 STKc_Nek7 Catalytic do 99.9 4.6E-25 9.9E-30 235.8 13.6 198 30-321 54-260 (267)
460 cd05610 STKc_MASTL Catalytic d 99.9 5.4E-25 1.2E-29 263.4 15.7 96 32-132 58-154 (669)
461 cd08530 STKc_CNK2-like Catalyt 99.9 5.1E-25 1.1E-29 233.7 13.8 200 29-325 50-256 (256)
462 cd05044 PTKc_c-ros Catalytic d 99.9 5.8E-25 1.3E-29 235.3 14.1 199 30-321 51-265 (269)
463 KOG0639 Transducin-like enhanc 99.9 3E-24 6.4E-29 225.0 18.8 265 540-829 437-703 (705)
464 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 3.4E-25 7.3E-30 239.2 12.2 203 30-321 57-278 (284)
465 cd05095 PTKc_DDR2 Catalytic do 99.9 5.9E-25 1.3E-29 238.9 14.0 199 31-321 72-292 (296)
466 cd05067 PTKc_Lck_Blk Catalytic 99.9 4.3E-25 9.3E-30 235.1 12.6 196 31-321 54-255 (260)
467 KOG1290 Serine/threonine prote 99.9 3.3E-25 7.1E-30 234.5 11.4 80 39-118 143-224 (590)
468 cd05034 PTKc_Src_like Catalyti 99.9 5.6E-25 1.2E-29 234.3 13.3 197 31-321 54-256 (261)
469 cd05057 PTKc_EGFR_like Catalyt 99.9 4.9E-25 1.1E-29 237.3 13.0 200 28-321 59-263 (279)
470 cd05613 STKc_MSK1_N N-terminal 99.9 7.4E-25 1.6E-29 237.3 14.4 199 36-329 63-275 (290)
471 KOG0288 WD40 repeat protein Ti 99.9 2.7E-24 5.9E-29 221.4 17.5 266 533-828 187-459 (459)
472 cd05046 PTK_CCK4 Pseudokinase 99.9 6.7E-25 1.4E-29 235.7 13.8 197 31-321 61-271 (275)
473 cd05039 PTKc_Csk_like Catalyti 99.9 7.4E-25 1.6E-29 232.7 14.0 193 31-321 53-251 (256)
474 KOG4283 Transcription-coupled 99.9 4.6E-23 9.9E-28 203.5 25.1 292 565-884 40-363 (397)
475 KOG2055 WD40 repeat protein [G 99.9 4.6E-23 1E-27 215.1 26.3 292 567-885 212-511 (514)
476 KOG0321 WD40 repeat-containing 99.9 1.6E-23 3.4E-28 226.2 23.6 295 572-885 53-390 (720)
477 cd05043 PTK_Ryk Pseudokinase d 99.9 8E-25 1.7E-29 235.8 13.9 199 31-321 61-271 (280)
478 cd05107 PTKc_PDGFR_beta Cataly 99.9 6.6E-25 1.4E-29 246.9 13.5 156 78-321 235-394 (401)
479 cd05073 PTKc_Hck Catalytic dom 99.9 7.3E-25 1.6E-29 233.4 12.9 203 22-321 47-255 (260)
480 PRK13184 pknD serine/threonine 99.9 3.8E-25 8.1E-30 262.3 11.5 217 29-321 53-284 (932)
481 cd05581 STKc_PDK1 Catalytic do 99.9 7.2E-25 1.6E-29 235.9 12.5 213 36-325 60-280 (280)
482 cd05123 STKc_AGC Catalytic dom 99.9 1.1E-24 2.3E-29 230.4 13.2 197 32-325 47-250 (250)
483 KOG0289 mRNA splicing factor [ 99.9 5.7E-23 1.2E-27 212.7 25.3 270 533-829 231-505 (506)
484 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 1.3E-24 2.8E-29 232.7 13.8 199 30-321 47-265 (269)
485 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1E-24 2.2E-29 240.4 12.5 206 31-334 62-300 (328)
486 KOG0269 WD40 repeat-containing 99.9 6.7E-24 1.5E-28 233.7 18.2 246 570-831 89-341 (839)
487 KOG1006 Mitogen-activated prot 99.9 1.4E-26 3.1E-31 227.0 -2.5 224 9-328 95-333 (361)
488 KOG0668 Casein kinase II, alph 99.9 5.7E-25 1.2E-29 211.1 8.0 196 36-328 91-328 (338)
489 KOG2445 Nuclear pore complex c 99.9 1.4E-22 3E-27 201.7 25.0 262 565-831 10-319 (361)
490 cd08528 STKc_Nek10 Catalytic d 99.9 2.8E-24 6.1E-29 230.0 14.3 192 34-321 65-265 (269)
491 cd05583 STKc_MSK_N N-terminal 99.9 2.3E-24 5.1E-29 233.2 13.8 200 36-330 63-274 (288)
492 smart00750 KIND kinase non-cat 99.9 7.1E-25 1.5E-29 218.8 8.3 158 66-326 1-169 (176)
493 cd05074 PTKc_Tyro3 Catalytic d 99.9 4.1E-24 8.9E-29 229.2 14.3 202 30-321 53-267 (273)
494 KOG0670 U4/U6-associated splic 99.9 5.3E-25 1.1E-29 233.6 7.0 183 53-327 505-751 (752)
495 KOG1151 Tousled-like protein k 99.9 2.2E-24 4.7E-29 224.4 11.0 205 35-327 524-746 (775)
496 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 3.5E-24 7.5E-29 231.1 13.0 202 31-321 59-278 (284)
497 KOG0294 WD40 repeat-containing 99.9 6.3E-22 1.4E-26 197.7 26.6 266 583-885 4-280 (362)
498 KOG0308 Conserved WD40 repeat- 99.9 2.6E-23 5.7E-28 224.9 17.8 243 616-885 20-284 (735)
499 KOG2096 WD40 repeat protein [G 99.9 8.3E-22 1.8E-26 196.6 26.9 310 546-883 64-399 (420)
500 KOG1408 WD40 repeat protein [F 99.9 1.9E-22 4.2E-27 219.0 24.2 316 540-885 343-712 (1080)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=5.4e-91 Score=851.64 Aligned_cols=741 Identities=71% Similarity=1.126 Sum_probs=577.0
Q ss_pred cccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCc
Q 002736 49 ENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESAS 128 (886)
Q Consensus 49 ~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~ 128 (886)
.++.+.+.++.+|||.+++|++||..+.+.+++.++++|++||+.||+|||++|||||||||+||||+..|.+|++|||+
T Consensus 47 ~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~ 126 (793)
T PLN00181 47 LDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESAS 126 (793)
T ss_pred ccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccc
Confidence 34455578999999999999999977667799999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccc
Q 002736 129 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 208 (886)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (886)
+...+.+. ...+++.|||.+.......... .
T Consensus 127 ~~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-----------------------~ 157 (793)
T PLN00181 127 CSDSGSDE--------------------------DATTKSREIGSSRREEILSERR-----------------------I 157 (793)
T ss_pred cCcccccc--------------------------cCcccccccccccccccccccc-----------------------h
Confidence 97654321 1235677887765421100000 0
Q ss_pred cccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhcCCCCCchhhHHhHhhccCCCC
Q 002736 209 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288 (886)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~pf~~~~~~~~~~~~~~~~~~~ 288 (886)
..........++......+||+||||||++.+..|+.++|||||||+||||++|+.+.......+..+.....+
T Consensus 158 ------~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~ 231 (793)
T PLN00181 158 ------EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLP 231 (793)
T ss_pred ------hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcC
Confidence 00001112233334455689999999999999999999999999999999999665555444455555555556
Q ss_pred hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhHHHHHH
Q 002736 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKK 368 (886)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~~e~~~~~~~~e~~~~~~~l~~~l~~~~q~k~ee~~~ 368 (886)
+......+....++.+||+++|.+||++.|+++||||........+++......+...+.+.+.+++...++++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 311 (793)
T PLN00181 232 PQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADK 311 (793)
T ss_pred hhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 55555567788999999999999999999999999998765544444444455555566666778887778888999999
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhhCCCCcchhcccccCCCCCCCCccccCCCCCcccCcccccccccccccccccCCcc
Q 002736 369 LQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNL 448 (886)
Q Consensus 369 lq~~l~~l~~Die~vek~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (886)
++..++.++.||+++++|+......++.. ......+++.+.+..+...+...+.
T Consensus 312 ~~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~- 365 (793)
T PLN00181 312 LQDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFLASRKRIRQGAETLAAEEENDD- 365 (793)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccc-------------------------ccccccchhhhccccchhhcccccc-
Confidence 99999999999999998665543221110 1112223333332222111100000
Q ss_pred ccccccccCCCcccchhhhhHHHHhHhHHHHHHHhhccCcCCC---CCCCccccccccC-CCCCCCccccccccccccCC
Q 002736 449 DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP---SGRPLVRHSQLSS-DGRTSKPLVNERSSINNLGS 524 (886)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~y~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 524 (886)
........+.+.+++++|||.+|+|||+|||.+|++.... ..+++.+..+... +++++ +..+..++..
T Consensus 366 ---~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 437 (793)
T PLN00181 366 ---NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAK 437 (793)
T ss_pred ---ccccccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----cccccccccc
Confidence 0000122346677889999999999999999999865332 2334444443333 33322 3334444443
Q ss_pred cc-cccc-CCcccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccC
Q 002736 525 KE-GYSE-GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (886)
Q Consensus 525 ~~-~~~~-~~~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~ 602 (886)
.+ .|.. ....+++.+|.+|++++|++.+.+....++.+++.+|.+.|++++|+|+|++|||||.|++|+||++.....
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~ 517 (793)
T PLN00181 438 PPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK 517 (793)
T ss_pred cccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccc
Confidence 22 3332 234566888999999999999999999998899999999999999999999999999999999999875433
Q ss_pred cccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCC
Q 002736 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD 682 (886)
Q Consensus 603 ~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 682 (886)
.....+.+...+.+...|.+++|+++.+.+||+++.||+|+|||+.+++.+..+.+|.+.|++++|+|.++.+|++|+.|
T Consensus 518 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~D 597 (793)
T PLN00181 518 DGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDD 597 (793)
T ss_pred cccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCC
Confidence 33344566667777889999999998889999999999999999999999999999999999999997678999999999
Q ss_pred CcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec
Q 002736 683 GSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV 762 (886)
Q Consensus 683 g~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~ 762 (886)
|+|++||+++ +..+..+.....++++.|++.++.+|++|+.||+|++||+++.+.++..+.+|...|++++|.
T Consensus 598 g~v~iWd~~~-------~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~ 670 (793)
T PLN00181 598 GSVKLWSINQ-------GVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV 670 (793)
T ss_pred CEEEEEECCC-------CcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe
Confidence 9999999998 667777777788999999776689999999999999999998876788889999999999999
Q ss_pred CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCC
Q 002736 763 DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 842 (886)
Q Consensus 763 ~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~ 842 (886)
++.+|+||+.|++|++||++.........++.++.+|.+.+++++|+|++.+||+|+.|++|++|+...+.++.++.+..
T Consensus 671 ~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~ 750 (793)
T PLN00181 671 DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKT 750 (793)
T ss_pred CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEeccc
Confidence 89999999999999999998643222235688999999999999999999999999999999999999998888888877
Q ss_pred CCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEeC
Q 002736 843 ADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 886 (886)
Q Consensus 843 ~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l~ 886 (886)
...+.+....++..+|++++|+|++. +|++|+.||+|+||+||
T Consensus 751 ~~~~~~~~~~~~~~~V~~v~ws~~~~-~lva~~~dG~I~i~~~~ 793 (793)
T PLN00181 751 IDPVSGLEVDDASQFISSVCWRGQSS-TLVAANSTGNIKILEMV 793 (793)
T ss_pred CCcccccccCCCCcEEEEEEEcCCCC-eEEEecCCCcEEEEecC
Confidence 76666555567788999999999999 99999999999999997
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-44 Score=365.95 Aligned_cols=312 Identities=20% Similarity=0.308 Sum_probs=272.6
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
.+..++|..|.++++||..+-.+..+. .+|.+.|.|++|+|||+.||+|+.||.|.+||..+.... ...
T Consensus 127 g~~l~tGsGD~TvR~WD~~TeTp~~t~-----KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~------g~~ 195 (480)
T KOG0271|consen 127 GSRLVTGSGDTTVRLWDLDTETPLFTC-----KGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQI------GRA 195 (480)
T ss_pred CceEEecCCCceEEeeccCCCCcceee-----cCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcc------ccc
Confidence 345688899999999999998887777 579999999999999999999999999999998764222 122
Q ss_pred EecCCCCeeeEEEeCC----CCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEE
Q 002736 613 EMASRSKLSSICWNSY----IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~----~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lw 688 (886)
..+|+..|++++|.|. ...+|||++.||+|+|||+..++++..+.+|+.+|+||.|- ...++++||.|++|++|
T Consensus 196 l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwG--G~gliySgS~DrtIkvw 273 (480)
T KOG0271|consen 196 LRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWG--GEGLIYSGSQDRTIKVW 273 (480)
T ss_pred ccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEc--CCceEEecCCCceEEEE
Confidence 3479999999999874 34689999999999999999999999999999999999997 46799999999999999
Q ss_pred eCchhhhhhccCceeeeeecC-CCeEEEEEe-----------CC------------------------CCcEEEEEeCCC
Q 002736 689 SINQAILLLHLGVSIGTIKTK-ANVCCVQFP-----------LD------------------------SGRSLAFGSADH 732 (886)
Q Consensus 689 d~~~~~~~~~~~~~~~~~~~~-~~v~~v~~s-----------p~------------------------~~~~l~~gs~Dg 732 (886)
+... +.....+.++ ..|+.++.+ |. ++..+++||.|+
T Consensus 274 ~a~d-------G~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~ 346 (480)
T KOG0271|consen 274 RALD-------GKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDF 346 (480)
T ss_pred Eccc-------hhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCc
Confidence 9988 5555555543 456766655 22 234599999999
Q ss_pred eEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecC
Q 002736 733 RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW 811 (886)
Q Consensus 733 ~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 811 (886)
++.+|+-...+.|+..+.+|..-|+.|.|+ |+.++||||-|..|++||.++++ -+.+|+||-..|..|+|+.|
T Consensus 347 tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk------~lasfRGHv~~VYqvawsaD 420 (480)
T KOG0271|consen 347 TLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK------FLASFRGHVAAVYQVAWSAD 420 (480)
T ss_pred eEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcc------hhhhhhhccceeEEEEeccC
Confidence 999999988888999999999999999998 99999999999999999999984 48999999999999999999
Q ss_pred CCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 812 DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 812 g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
.++|++||.|.+++||++.+.+... ...+|...|.+|.|+|||. .+++|+.|..+++|.
T Consensus 421 sRLlVS~SkDsTLKvw~V~tkKl~~-------------DLpGh~DEVf~vDwspDG~-rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 421 SRLLVSGSKDSTLKVWDVRTKKLKQ-------------DLPGHADEVFAVDWSPDGQ-RVASGGKDKVLRLWR 479 (480)
T ss_pred ccEEEEcCCCceEEEEEeeeeeecc-------------cCCCCCceEEEEEecCCCc-eeecCCCceEEEeec
Confidence 9999999999999999999876542 3356778899999999999 999999999999995
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-42 Score=352.39 Aligned_cols=286 Identities=24% Similarity=0.401 Sum_probs=253.6
Q ss_pred CcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccce-EEecCCCCeeeEEEeCCCCCeEEEecCCC
Q 002736 562 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEG 640 (886)
Q Consensus 562 ~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~-~~~~~~~~I~~l~~~~~~~~~las~s~Dg 640 (886)
..+.+|.++|.|+.|+|+|..||||+.|.++++||+.+. .|. ..-+|...|.||+|+| ++..||||+.||
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te--------Tp~~t~KgH~~WVlcvawsP-Dgk~iASG~~dg 179 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE--------TPLFTCKGHKNWVLCVAWSP-DGKKIASGSKDG 179 (480)
T ss_pred cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC--------CcceeecCCccEEEEEEECC-CcchhhccccCC
Confidence 557899999999999999999999999999999999873 222 3346999999999999 799999999999
Q ss_pred cEEEEECCCceE-EEEecccCCcEEEEEEccC----CCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEE
Q 002736 641 VVQVWDVSRSQV-LTEMREHERRVWSIDFSSA----DPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCC 714 (886)
Q Consensus 641 ~V~iWd~~t~~~-~~~~~~h~~~v~~v~~~p~----~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~ 714 (886)
+|++||..+++. .+.+.+|.+.|++++|.|- ...+||+++.||+|+|||+.. +.++..+. |...|+|
T Consensus 180 ~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~-------~~~~~~lsgHT~~VTC 252 (480)
T KOG0271|consen 180 SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL-------GTCVRTLSGHTASVTC 252 (480)
T ss_pred eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccC-------ceEEEEeccCccceEE
Confidence 999999999875 4778999999999999863 457999999999999999998 66766665 5678999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec------------CC------------------
Q 002736 715 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV------------DA------------------ 764 (886)
Q Consensus 715 v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~------------~~------------------ 764 (886)
|.|--+ .++++||.|++|++|+...+.. ...++||...|+.++.+ .+
T Consensus 253 vrwGG~--gliySgS~DrtIkvw~a~dG~~-~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~ 329 (480)
T KOG0271|consen 253 VRWGGE--GLIYSGSQDRTIKVWRALDGKL-CRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYE 329 (480)
T ss_pred EEEcCC--ceEEecCCCceEEEEEccchhH-HHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHH
Confidence 999754 5899999999999999988774 88899999999988764 12
Q ss_pred -------CEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCccee
Q 002736 765 -------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALS 837 (886)
Q Consensus 765 -------~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~ 837 (886)
+.|+|||.|+++.+|+-...+ +|+....||+..|+.|.||||++|||++|-|..|++|+-.+++.+.+
T Consensus 330 ~~~~~~~erlVSgsDd~tlflW~p~~~k-----kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~las 404 (480)
T KOG0271|consen 330 AVLKDSGERLVSGSDDFTLFLWNPFKSK-----KPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLAS 404 (480)
T ss_pred HhhccCcceeEEecCCceEEEecccccc-----cchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhh
Confidence 349999999999999987664 67889999999999999999999999999999999999999998866
Q ss_pred eccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 838 FNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
|+ +|-+.|..|+|+.|++ +|++++.|.++|||++
T Consensus 405 fR-------------GHv~~VYqvawsaDsR-LlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 405 FR-------------GHVAAVYQVAWSADSR-LLVSGSKDSTLKVWDV 438 (480)
T ss_pred hh-------------hccceeEEEEeccCcc-EEEEcCCCceEEEEEe
Confidence 53 5778899999999999 9999999999999986
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.9e-42 Score=355.66 Aligned_cols=284 Identities=23% Similarity=0.336 Sum_probs=257.3
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCC-CCCeEEEecCCCcEE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVVQ 643 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~-~~~~las~s~Dg~V~ 643 (886)
.+...+|..+.|++|+..||||+.+|.+|||+..+. .......+|.+.|.++.|+|. +...+|||+.||+|+
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-------~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvk 244 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-------NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVK 244 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-------ceeEEEeccccceeeEEEccCCCccceeeeccCCcee
Confidence 566889999999999999999999999999998763 233456689999999999997 467999999999999
Q ss_pred EEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCc
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGR 723 (886)
Q Consensus 644 iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 723 (886)
+|++.+...+..+.+|..+|..+.|+| +|.+|+|+|.|.+-+|||+++..... ..-.|...|.+++|+|+ |.
T Consensus 245 lw~~~~e~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL------~QEGHs~~v~~iaf~~D-GS 316 (459)
T KOG0272|consen 245 LWKLSQETPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELL------LQEGHSKGVFSIAFQPD-GS 316 (459)
T ss_pred eeccCCCcchhhhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhH------hhcccccccceeEecCC-Cc
Confidence 999999999999999999999999999 99999999999999999999953322 22345678999999999 99
Q ss_pred EEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCc
Q 002736 724 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV 802 (886)
Q Consensus 724 ~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~ 802 (886)
++++|+.|..-+|||+|++++ +..+.+|.++|.+|.|+ +|..|||||.|++++|||++.. .++.++.+|++.
T Consensus 317 L~~tGGlD~~~RvWDlRtgr~-im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r------~~ly~ipAH~nl 389 (459)
T KOG0272|consen 317 LAATGGLDSLGRVWDLRTGRC-IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR------SELYTIPAHSNL 389 (459)
T ss_pred eeeccCccchhheeecccCcE-EEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc------ccceecccccch
Confidence 999999999999999999996 99999999999999997 9999999999999999999987 458999999999
Q ss_pred eeEEEEec-CCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEE
Q 002736 803 KNFVGLSV-WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 881 (886)
Q Consensus 803 v~~v~~sp-~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~ 881 (886)
|..|.|+| .|.+|+|+|.|++++||...+..++.++ -+|.+.|.+|+.++++. .++|++.|.+||
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL-------------aGHe~kV~s~Dis~d~~-~i~t~s~DRT~K 455 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL-------------AGHEGKVISLDISPDSQ-AIATSSFDRTIK 455 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhh-------------cCCccceEEEEeccCCc-eEEEeccCceee
Confidence 99999999 5789999999999999999988877544 45778899999999999 999999999999
Q ss_pred EEE
Q 002736 882 ILE 884 (886)
Q Consensus 882 iw~ 884 (886)
+|.
T Consensus 456 LW~ 458 (459)
T KOG0272|consen 456 LWR 458 (459)
T ss_pred ecc
Confidence 995
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=8.8e-40 Score=335.98 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=241.9
Q ss_pred cccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEEcCcccCcccccccce-
Q 002736 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPV- 611 (886)
Q Consensus 535 ~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d--~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~- 611 (886)
-+++|+.+|.+|+|+..+.....+| .+|...|.++.|+|. +..+|||+.||++++|+++.. .++
T Consensus 189 ~laT~swsG~~kvW~~~~~~~~~~l-----~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e--------~~l~ 255 (459)
T KOG0272|consen 189 HLATGSWSGLVKVWSVPQCNLLQTL-----RGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE--------TPLQ 255 (459)
T ss_pred eEEEeecCCceeEeecCCcceeEEE-----eccccceeeEEEccCCCccceeeeccCCceeeeccCCC--------cchh
Confidence 3578899999999999998777776 689999999999996 669999999999999999862 122
Q ss_pred EEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCc
Q 002736 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (886)
Q Consensus 612 ~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~ 691 (886)
...+|...|..++|+| ++.+|+|+++|.+-++||+++++.+...++|...|.+++|.| +|.+++||+.|..-+|||++
T Consensus 256 ~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlR 333 (459)
T KOG0272|consen 256 DLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLR 333 (459)
T ss_pred hhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhcccccccceeEecC-CCceeeccCccchhheeecc
Confidence 2235888999999999 799999999999999999999998888899999999999998 99999999999999999999
Q ss_pred hhhhhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEE
Q 002736 692 QAILLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLV 768 (886)
Q Consensus 692 ~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~ 768 (886)
+ +.++..+.. ...|.+|+|+|+ |..||+||.|++++|||+|..+. +.++.+|..-|+.|+|. .|.+|+
T Consensus 334 t-------gr~im~L~gH~k~I~~V~fsPN-Gy~lATgs~Dnt~kVWDLR~r~~-ly~ipAH~nlVS~Vk~~p~~g~fL~ 404 (459)
T KOG0272|consen 334 T-------GRCIMFLAGHIKEILSVAFSPN-GYHLATGSSDNTCKVWDLRMRSE-LYTIPAHSNLVSQVKYSPQEGYFLV 404 (459)
T ss_pred c-------CcEEEEecccccceeeEeECCC-ceEEeecCCCCcEEEeeeccccc-ceecccccchhhheEecccCCeEEE
Confidence 9 777777764 567999999999 99999999999999999998885 99999999999999997 788999
Q ss_pred EEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEe
Q 002736 769 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 828 (886)
Q Consensus 769 sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd 828 (886)
|+|.|++++||...+. .|++++.||.+.|.++++++++++|+|+|.|+++++|.
T Consensus 405 TasyD~t~kiWs~~~~------~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 405 TASYDNTVKIWSTRTW------SPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EcccCcceeeecCCCc------ccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999999999999988 67999999999999999999999999999999999995
No 6
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-37 Score=298.62 Aligned_cols=297 Identities=22% Similarity=0.356 Sum_probs=250.5
Q ss_pred CcccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCcccCcccccccce-EEecCCCCeeeEEEeCCCCCeEEEecCC
Q 002736 562 GDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFE 639 (886)
Q Consensus 562 ~~~~~h~~~V~sl~f~~d-~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~-~~~~~~~~I~~l~~~~~~~~~las~s~D 639 (886)
+.+.+|.+.|+.++..+. .+.+.+++.|++|.+|++..... ....++ ...+|..-|+.+..++ ++++.+|+++|
T Consensus 9 ~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~---~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD 84 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI---KYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWD 84 (315)
T ss_pred eeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc---ccCceeeeeeccceEecceEEcc-CCceEEecccc
Confidence 556889999999999986 67899999999999999987411 222233 3345888899999998 79999999999
Q ss_pred CcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-c--CCCeEEEE
Q 002736 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-T--KANVCCVQ 716 (886)
Q Consensus 640 g~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~--~~~v~~v~ 716 (886)
+++++||+.+++..+.|.+|...|.+++|+| +..++++|+.|.+|++||+.. .+..++. . ...|.||.
T Consensus 85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g--------~ck~t~~~~~~~~WVscvr 155 (315)
T KOG0279|consen 85 GTLRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLG--------VCKYTIHEDSHREWVSCVR 155 (315)
T ss_pred ceEEEEEecCCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeecc--------cEEEEEecCCCcCcEEEEE
Confidence 9999999999999999999999999999998 899999999999999999985 3333333 2 56799999
Q ss_pred EeCCC-CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCce
Q 002736 717 FPLDS-GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLH 794 (886)
Q Consensus 717 ~sp~~-~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~ 794 (886)
|+|.. .-+|+++|.|++|++||+++.+. ...+.||.+.++.+.++ ||..+++|+.||.+.+||++.++ .+.
T Consensus 156 fsP~~~~p~Ivs~s~DktvKvWnl~~~~l-~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k------~ly 228 (315)
T KOG0279|consen 156 FSPNESNPIIVSASWDKTVKVWNLRNCQL-RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK------NLY 228 (315)
T ss_pred EcCCCCCcEEEEccCCceEEEEccCCcch-hhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc------eeE
Confidence 99984 46899999999999999999885 78899999999999998 99999999999999999999884 355
Q ss_pred EeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEE
Q 002736 795 SFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 874 (886)
Q Consensus 795 ~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~ 874 (886)
++ +|...|++++|+|+.-+|+.+ .+..|+|||+.++..+..++..-..+ ......-...+++|+++|. .|++|
T Consensus 229 sl-~a~~~v~sl~fspnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~----s~~~~~~~clslaws~dG~-tLf~g 301 (315)
T KOG0279|consen 229 SL-EAFDIVNSLCFSPNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGP----SSKAGDPICLSLAWSADGQ-TLFAG 301 (315)
T ss_pred ec-cCCCeEeeEEecCCceeEeec-cCCceEEEeccchhhhhhcccccccc----ccccCCcEEEEEEEcCCCc-EEEee
Confidence 55 588899999999986555554 45569999999999988877654332 1222344578899999999 99999
Q ss_pred eCCCCEEEEEe
Q 002736 875 NSSGNIKILEM 885 (886)
Q Consensus 875 ~~dg~I~iw~l 885 (886)
-.|+.|++|++
T Consensus 302 ~td~~irv~qv 312 (315)
T KOG0279|consen 302 YTDNVIRVWQV 312 (315)
T ss_pred ecCCcEEEEEe
Confidence 99999999986
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-40 Score=339.94 Aligned_cols=208 Identities=21% Similarity=0.229 Sum_probs=169.6
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
++.-.+-..+||++|.... +. ...+..|+|||| .||+|.+++-.+ ..+.+..++.+|+||+.||.|||++||+|
T Consensus 225 ~EieILkkL~HP~IV~~~d-~f---~~~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~GI~H 299 (475)
T KOG0615|consen 225 NEIEILKKLSHPNIVRIKD-FF---EVPDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQGIIH 299 (475)
T ss_pred HHHHHHHhcCCCCEEEEee-ee---ecCCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHcCccc
Confidence 3444556678888887666 33 245667999999 999999999554 57899999999999999999999999999
Q ss_pred cccCCcceeeccC---CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 106 HNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 106 rDlkP~NIll~~~---~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|||||+|||+..+ -.+||+|||+|+..+..+
T Consensus 300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s---------------------------------------------- 333 (475)
T KOG0615|consen 300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS---------------------------------------------- 333 (475)
T ss_pred ccCCcceEEeccCCcceEEEecccchhhccccce----------------------------------------------
Confidence 9999999999765 679999999997765332
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC---CCcccccchHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLG 259 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDIwSlG 259 (886)
.+.++||||.|.|||++.+.. +..++||||||
T Consensus 334 ---------------------------------------------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlG 368 (475)
T KOG0615|consen 334 ---------------------------------------------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLG 368 (475)
T ss_pred ---------------------------------------------ehhhhcCCccccChhheecCCeecccchheeeecc
Confidence 223459999999999998755 34488999999
Q ss_pred HHHHHHhc---CCCCCchhhHHhHhhcc---CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 260 VLLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 260 vil~eLl~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
|+||-+|+ ||............+.. .+.|+.|...+.+..+||.+||..||+.|||+.|+|+||||+..+.
T Consensus 369 cvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 369 CVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred ceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 99999999 77655554434444433 3457888888999999999999999999999999999999997653
No 8
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=2.8e-36 Score=296.70 Aligned_cols=282 Identities=16% Similarity=0.238 Sum_probs=247.9
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~i 644 (886)
.+|.+.|.++.|++|.+++++++.||++.|||.-+..+.+. ..-....|..++|+| +++.+|+|+.|+.+.|
T Consensus 52 kGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~ha-------ipl~s~WVMtCA~sP-Sg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 52 KGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHA-------IPLPSSWVMTCAYSP-SGNFVACGGLDNKCSI 123 (343)
T ss_pred cccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeE-------EecCceeEEEEEECC-CCCeEEecCcCceeEE
Confidence 68999999999999999999999999999999877543332 112457899999999 7999999999999999
Q ss_pred EECCCc------eEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEE
Q 002736 645 WDVSRS------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQF 717 (886)
Q Consensus 645 Wd~~t~------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~ 717 (886)
|++.+. +..+++.+|++-+.|+.|. +..+|+++|.|.++.+||+++ +..+..+. |.+.|.++++
T Consensus 124 y~ls~~d~~g~~~v~r~l~gHtgylScC~f~--dD~~ilT~SGD~TCalWDie~-------g~~~~~f~GH~gDV~slsl 194 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELAGHTGYLSCCRFL--DDNHILTGSGDMTCALWDIET-------GQQTQVFHGHTGDVMSLSL 194 (343)
T ss_pred EecccccccccceeeeeecCccceeEEEEEc--CCCceEecCCCceEEEEEccc-------ceEEEEecCCcccEEEEec
Confidence 999865 4567889999999999998 467999999999999999999 77777666 4577999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEe
Q 002736 718 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 796 (886)
Q Consensus 718 sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~ 796 (886)
+|.+++.|++|+.|++.++||+|.+. .+.+|.+|...|++|+|. +|.-++|||.|+++++||++.... +..+
T Consensus 195 ~p~~~ntFvSg~cD~~aklWD~R~~~-c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~------~a~y 267 (343)
T KOG0286|consen 195 SPSDGNTFVSGGCDKSAKLWDVRSGQ-CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQE------LAVY 267 (343)
T ss_pred CCCCCCeEEecccccceeeeeccCcc-eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcE------Eeee
Confidence 99559999999999999999999997 599999999999999996 999999999999999999998743 4555
Q ss_pred e--cCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEE
Q 002736 797 T--GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 874 (886)
Q Consensus 797 ~--~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~ 874 (886)
. .-..+|++|+||..|++|.+|..|.++.+||.-.++.+..+ .+|...|+++..+|||. .|+||
T Consensus 268 s~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L-------------~GHeNRvScl~~s~DG~-av~Tg 333 (343)
T KOG0286|consen 268 SHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL-------------AGHENRVSCLGVSPDGM-AVATG 333 (343)
T ss_pred ccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEe-------------eccCCeeEEEEECCCCc-EEEec
Confidence 4 23457999999999999999999999999998887766433 36778899999999999 99999
Q ss_pred eCCCCEEEEE
Q 002736 875 NSSGNIKILE 884 (886)
Q Consensus 875 ~~dg~I~iw~ 884 (886)
+.|.++|||.
T Consensus 334 SWDs~lriW~ 343 (343)
T KOG0286|consen 334 SWDSTLRIWA 343 (343)
T ss_pred chhHheeecC
Confidence 9999999994
No 9
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=5.6e-36 Score=295.92 Aligned_cols=291 Identities=24% Similarity=0.320 Sum_probs=254.0
Q ss_pred CcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCc
Q 002736 562 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 562 ~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~ 641 (886)
-.+.+|.+.|+.+.|+|+|.+|||||.|..|.+|+....... ....-+|.+.|..+.|.+ +++.|+|++.|.+
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN------~~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN------FWVLKGHSGAVMELHGMR-DGSHILSCGTDKT 113 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc------eeeeccccceeEeeeecc-CCCEEEEecCCce
Confidence 345789999999999999999999999999999996542111 112237999999999998 7999999999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCC
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDS 721 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 721 (886)
|+.||+++|++.+.+++|.+-|++++-+.....++.+|++||+++|||+++ ...++++..+.++++|.|...
T Consensus 114 v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~-------k~~~~t~~~kyqltAv~f~d~- 185 (338)
T KOG0265|consen 114 VRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK-------KEAIKTFENKYQLTAVGFKDT- 185 (338)
T ss_pred EEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc-------cchhhccccceeEEEEEeccc-
Confidence 999999999999999999999999986655678999999999999999999 788888888899999999988
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT 800 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~ 800 (886)
+..+.+|+-|+.|++||+|+... ++++.||.++|+.+..+ +|..+.|-+.|.++++||++-.... .+++..+.||.
T Consensus 186 s~qv~sggIdn~ikvWd~r~~d~-~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~--~R~v~if~g~~ 262 (338)
T KOG0265|consen 186 SDQVISGGIDNDIKVWDLRKNDG-LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPS--QRCVKIFQGHI 262 (338)
T ss_pred ccceeeccccCceeeeccccCcc-eEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCC--CceEEEeecch
Confidence 78899999999999999999885 99999999999999997 9999999999999999999865431 24578888875
Q ss_pred Cc----eeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeC
Q 002736 801 NV----KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANS 876 (886)
Q Consensus 801 ~~----v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~ 876 (886)
.. ...++|+|++.++.+|+.|..+++||......+.. ..+|.+.|++++|+|..+ +|.++++
T Consensus 263 hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyk-------------lpGh~gsvn~~~Fhp~e~-iils~~s 328 (338)
T KOG0265|consen 263 HNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYK-------------LPGHYGSVNEVDFHPTEP-IILSCSS 328 (338)
T ss_pred hhhhhhcceeeccCCCCccccccccceEEEeecccccEEEE-------------cCCcceeEEEeeecCCCc-EEEEecc
Confidence 42 35578999999999999999999999887655532 356778899999999999 9999999
Q ss_pred CCCEEEEE
Q 002736 877 SGNIKILE 884 (886)
Q Consensus 877 dg~I~iw~ 884 (886)
|.+|.+=+
T Consensus 329 dk~i~lge 336 (338)
T KOG0265|consen 329 DKTIYLGE 336 (338)
T ss_pred CceeEeec
Confidence 99998643
No 10
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=325.82 Aligned_cols=208 Identities=21% Similarity=0.237 Sum_probs=174.3
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCee
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~gii 104 (886)
+++..+-.-+++.+|++|+ ++.++.. ...|+||| +||||.+++++. +.+++...-.|+++|+.||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~yg-aF~~~~~--~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYG-AFYSNGE--EISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeE-EEEeCCc--eEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 4555556669999999888 5544322 68999999 999999999655 678999999999999999999995 9999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
||||||+|||++..|+|||||||++..+...
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS------------------------------------------------- 232 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS------------------------------------------------- 232 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------------------
Confidence 9999999999999999999999998543211
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~e 264 (886)
...+.+||..|||||.+.+..|+.++||||||+.++|
T Consensus 233 -------------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 233 -------------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred -------------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 0122499999999999999999999999999999999
Q ss_pred Hhc---CCCCC----chhhHHhHhhccCCCChhhhc-cChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 265 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 265 Ll~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
+.. ||... ......+..+.....|..+.. .++++.+|+..||++||.+||++.|+++|||+.....
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 999 66543 355566677776666666665 7899999999999999999999999999999987644
No 11
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=9.8e-37 Score=312.04 Aligned_cols=280 Identities=18% Similarity=0.315 Sum_probs=242.3
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEEC
Q 002736 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (886)
Q Consensus 568 ~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~ 647 (886)
+-+|..+.|.|+|+.|+||+..|.+.+|+.... .......+|.++|+++.|++ ++..++||+.+|.|++|+.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f-------nFEtilQaHDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqp 167 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF-------NFETILQAHDSPVRTMKWSH-NGTWMISGDKGGMIKYWQP 167 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCcee-------eHHHHhhhhcccceeEEEcc-CCCEEEEcCCCceEEeccc
Confidence 458999999999999999999999999997542 22223457999999999998 7999999999999999998
Q ss_pred CCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEE
Q 002736 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLA 726 (886)
Q Consensus 648 ~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~ 726 (886)
.-..+......|...|.+++|+| +...|++||+||+|+|||.... .....+. +...|.|++|+|. ..+||
T Consensus 168 nmnnVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~-------kee~vL~GHgwdVksvdWHP~-kgLia 238 (464)
T KOG0284|consen 168 NMNNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMP-------KEERVLRGHGWDVKSVDWHPT-KGLIA 238 (464)
T ss_pred chhhhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCC-------chhheeccCCCCcceeccCCc-cceeE
Confidence 65444333334559999999999 8899999999999999999884 3333334 4567999999999 78999
Q ss_pred EEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeE
Q 002736 727 FGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 805 (886)
Q Consensus 727 ~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 805 (886)
+||.|+.|++||.|++.+ +.++.+|+..|..++|. ++++|+|+|.|..++++|+++. +.++++++|+..+++
T Consensus 239 sgskDnlVKlWDprSg~c-l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m------kEl~~~r~Hkkdv~~ 311 (464)
T KOG0284|consen 239 SGSKDNLVKLWDPRSGSC-LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM------KELFTYRGHKKDVTS 311 (464)
T ss_pred EccCCceeEeecCCCcch-hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh------HHHHHhhcchhhhee
Confidence 999999999999999985 99999999999999997 8899999999999999999976 448999999999999
Q ss_pred EEEecCC-CEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 806 VGLSVWD-GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 806 v~~sp~g-~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
++|+|-. .++++|+.||.|..|.+...+|+..+. .+|...|++++|+|-|. +|++|+.|.++++|.
T Consensus 312 ~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~------------~AHd~~iwsl~~hPlGh-il~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 312 LTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIP------------PAHDGEIWSLAYHPLGH-ILATGSNDRTVRFWT 378 (464)
T ss_pred eccccccccceeeccCCCceEEEeccccccccCCC------------cccccceeeeeccccce-eEeecCCCcceeeec
Confidence 9999975 589999999999999998766664332 45777899999999999 999999999999995
No 12
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=6.7e-35 Score=303.57 Aligned_cols=309 Identities=22% Similarity=0.341 Sum_probs=264.4
Q ss_pred ccccccccceEEeeecC----ceEEEEecc-----CcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccc
Q 002736 536 WINPFLEGLCKYLSFSK----LRVKADLNQ-----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD 606 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~----~~~~~~l~~-----~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~ 606 (886)
+..|..+-..++|++.. +.....|++ +.-......|++++|+.+|.+||||..||.++||+......
T Consensus 194 lasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~---- 269 (524)
T KOG0273|consen 194 LASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLI---- 269 (524)
T ss_pred hhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCchhh----
Confidence 45566777888888763 222223332 12223457899999999999999999999999999876321
Q ss_pred cccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEE
Q 002736 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (886)
Q Consensus 607 ~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~ 686 (886)
...-.|+++|.+|.|+. .+++|++++-||++.+||..+++....+.-|..+..+|+|- +...|++++.|+.|+
T Consensus 270 ----~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~--~~~~F~ts~td~~i~ 342 (524)
T KOG0273|consen 270 ----STLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ--SNDEFATSSTDGCIH 342 (524)
T ss_pred ----hhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe--cCceEeecCCCceEE
Confidence 12335999999999998 79999999999999999999999999999999998899997 678999999999999
Q ss_pred EEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec---
Q 002736 687 LWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--- 762 (886)
Q Consensus 687 lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--- 762 (886)
|+-+.. ..++.++. |+..|.++.|+|. +.+|+++|.|+++++|...+... ...+.+|.+.|+.+.|+
T Consensus 343 V~kv~~-------~~P~~t~~GH~g~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~-~~~l~~Hskei~t~~wsp~g 413 (524)
T KOG0273|consen 343 VCKVGE-------DRPVKTFIGHHGEVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNS-VHDLQAHSKEIYTIKWSPTG 413 (524)
T ss_pred EEEecC-------CCcceeeecccCceEEEEECCC-CceEEEecCCCeeEeeecCCCcc-hhhhhhhccceeeEeecCCC
Confidence 999987 66666655 5678999999999 99999999999999999887764 88899999999999995
Q ss_pred -------CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcc
Q 002736 763 -------DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 835 (886)
Q Consensus 763 -------~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~ 835 (886)
.+..|++++.|++|++||+..+ .|+++|..|+.+|.+|+|||+|+|+|+|+.||.|.||++.+++..
T Consensus 414 ~v~~n~~~~~~l~sas~dstV~lwdv~~g------v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~ 487 (524)
T KOG0273|consen 414 PVTSNPNMNLMLASASFDSTVKLWDVESG------VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLV 487 (524)
T ss_pred CccCCCcCCceEEEeecCCeEEEEEccCC------ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchhee
Confidence 3458999999999999999998 569999999999999999999999999999999999999999887
Q ss_pred eeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 836 LSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
.++.- ...|+.|||+.+|+ .|.++-+||.+++.++
T Consensus 488 ~s~~~--------------~~~Ifel~Wn~~G~-kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 488 KSYQG--------------TGGIFELCWNAAGD-KLGACASDGSVCVLDL 522 (524)
T ss_pred EeecC--------------CCeEEEEEEcCCCC-EEEEEecCCCceEEEe
Confidence 66541 23499999999999 9999999999999987
No 13
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=7.5e-35 Score=286.70 Aligned_cols=273 Identities=21% Similarity=0.284 Sum_probs=235.5
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
.+..+++++||.+-+||.-|.....-+ .-.+..|-.++|+|.|+++|.||.|+...||++.....+.. ......
T Consensus 67 sr~ivSaSqDGklIvWDs~TtnK~hai-----pl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~-~~v~r~ 140 (343)
T KOG0286|consen 67 SRRIVSASQDGKLIVWDSFTTNKVHAI-----PLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGN-VRVSRE 140 (343)
T ss_pred cCeEEeeccCCeEEEEEcccccceeEE-----ecCceeEEEEEECCCCCeEEecCcCceeEEEeccccccccc-ceeeee
Confidence 345688999999999996553333222 23577999999999999999999999999999985322211 111223
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
..+|.+-++|+.|-. .++|+++|.|.++.+||+++++.+..|.+|.+.|.+++++|.+++.+++|+.|++.+|||++.
T Consensus 141 l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~ 218 (343)
T KOG0286|consen 141 LAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS 218 (343)
T ss_pred ecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccC
Confidence 567999999999986 788999999999999999999999999999999999999998999999999999999999999
Q ss_pred hhhhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEec--CCCCeEEEEec-CCCEEE
Q 002736 693 AILLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--HNKTVSYVKFV-DATTLV 768 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~--h~~~V~~v~f~-~~~~l~ 768 (886)
+..++++.. ...|++|+|.|+ |.-|++||.|+++++||+|..+. +..+.. -..+|++|+|+ .|++|+
T Consensus 219 -------~~c~qtF~ghesDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~-~a~ys~~~~~~gitSv~FS~SGRlLf 289 (343)
T KOG0286|consen 219 -------GQCVQTFEGHESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQE-LAVYSHDSIICGITSVAFSKSGRLLF 289 (343)
T ss_pred -------cceeEeecccccccceEEEccC-CCeeeecCCCceeEEEeecCCcE-EeeeccCcccCCceeEEEcccccEEE
Confidence 888888875 567999999999 89999999999999999998874 666652 34679999998 999999
Q ss_pred EEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEe
Q 002736 769 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 828 (886)
Q Consensus 769 sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd 828 (886)
+|..|.++.+||.-.+ +.+..+.||.+.|.++..+|||.-++|||.|.+++||.
T Consensus 290 agy~d~~c~vWDtlk~------e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 290 AGYDDFTCNVWDTLKG------ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeecCCceeEeecccc------ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 9999999999999877 44788999999999999999999999999999999993
No 14
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=276.86 Aligned_cols=275 Identities=17% Similarity=0.271 Sum_probs=236.8
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEE-ec
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MA 615 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~-~~ 615 (886)
+++..|-+|++|...+|++..++. +..+.|..++..||+..||+|+. -.|++||+.+.. ..|+.. .+
T Consensus 14 vsA~YDhTIRfWqa~tG~C~rTiq-----h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~n------p~Pv~t~e~ 81 (311)
T KOG0315|consen 14 VSAGYDHTIRFWQALTGICSRTIQ-----HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNN------PNPVATFEG 81 (311)
T ss_pred EeccCcceeeeeehhcCeEEEEEe-----cCccceeeEEEcCCcchhhhccC-CeeEEEEccCCC------CCceeEEec
Confidence 678899999999999999998885 34678999999999999999887 799999998731 224443 45
Q ss_pred CCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhh
Q 002736 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (886)
Q Consensus 616 ~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~ 695 (886)
|...|..|.|.. ++..++||+.||+|+|||++...+.+.|+ |..+|++|..+| +...|++|..+|.|++||+.....
T Consensus 82 h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 82 HTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred cCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecC-CcceEEeecCCCcEEEEEccCCcc
Confidence 789999999997 79999999999999999999977777765 789999999999 888999999999999999988422
Q ss_pred hhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC-----cceEEEecCCCCeEEEEec-CCCEEE
Q 002736 696 LLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-----IPLCTLIGHNKTVSYVKFV-DATTLV 768 (886)
Q Consensus 696 ~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~-----~~~~~~~~h~~~V~~v~f~-~~~~l~ 768 (886)
.. ..++ ....|.++...|+ |..++.+..-|++++|++-+.. .|+..++.|+..+..+.++ ++++||
T Consensus 159 ~~------~liPe~~~~i~sl~v~~d-gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~la 231 (311)
T KOG0315|consen 159 TH------ELIPEDDTSIQSLTVMPD-GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLA 231 (311)
T ss_pred cc------ccCCCCCcceeeEEEcCC-CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEE
Confidence 11 1111 2356999999999 8999999999999999987643 3678899999999999997 999999
Q ss_pred EEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceee
Q 002736 769 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 838 (886)
Q Consensus 769 sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~ 838 (886)
|+|.|.+++||++... .....++++|+.+++.++||.+|+||+|||.|+.+++|++..++.+..+
T Consensus 232 t~ssdktv~iwn~~~~-----~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 232 TCSSDKTVKIWNTDDF-----FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred eecCCceEEEEecCCc-----eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeec
Confidence 9999999999999876 1446789999999999999999999999999999999999998877544
No 15
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.4e-34 Score=275.86 Aligned_cols=275 Identities=17% Similarity=0.264 Sum_probs=234.3
Q ss_pred CCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCce--EEEEec
Q 002736 580 GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--VLTEMR 657 (886)
Q Consensus 580 ~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~--~~~~~~ 657 (886)
.-+||++|.|-+|++|...++.... ......+.|+.+...| ++..||+++ .-.|++||++++. ++..|.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~r-------Tiqh~dsqVNrLeiTp-dk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e 80 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSR-------TIQHPDSQVNRLEITP-DKKDLAAAG-NQHVRLYDLNSNNPNPVATFE 80 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEE-------EEecCccceeeEEEcC-Ccchhhhcc-CCeeEEEEccCCCCCceeEEe
Confidence 3589999999999999988753321 2223467899999999 688888887 5689999999875 689999
Q ss_pred ccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q 002736 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYY 737 (886)
Q Consensus 658 ~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vw 737 (886)
+|.+.|++|.|.. ++.++++|++||+++|||++. ......+.+.++|++|..+|+ ...|++|..+|.|++|
T Consensus 81 ~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~-------~~~qR~~~~~spVn~vvlhpn-QteLis~dqsg~irvW 151 (311)
T KOG0315|consen 81 GHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRS-------LSCQRNYQHNSPVNTVVLHPN-QTELISGDQSGNIRVW 151 (311)
T ss_pred ccCCceEEEEEee-cCeEEEecCCCceEEEEeccC-------cccchhccCCCCcceEEecCC-cceEEeecCCCcEEEE
Confidence 9999999999996 999999999999999999999 566667788899999999999 6789999999999999
Q ss_pred ecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEE
Q 002736 738 DLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVA 816 (886)
Q Consensus 738 Dlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la 816 (886)
|+++....-..+.....+|.++... +|.+|+.+..-|++.+|++-.........|+..++.|...+..+-+||+++|||
T Consensus 152 Dl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~la 231 (311)
T KOG0315|consen 152 DLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLA 231 (311)
T ss_pred EccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEE
Confidence 9998754222333455678888885 999999999999999999988666666788999999999999999999999999
Q ss_pred EEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 817 TGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 817 sgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
++|.|.+++||..... ...+ ....+|..+|+.++||.||. +|+||++|+.+++|++
T Consensus 232 t~ssdktv~iwn~~~~-~kle-----------~~l~gh~rWvWdc~FS~dg~-YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 232 TCSSDKTVKIWNTDDF-FKLE-----------LVLTGHQRWVWDCAFSADGE-YLVTASSDHTARLWDL 287 (311)
T ss_pred eecCCceEEEEecCCc-eeeE-----------EEeecCCceEEeeeeccCcc-EEEecCCCCceeeccc
Confidence 9999999999998864 1111 23366788999999999999 9999999999999986
No 16
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.3e-34 Score=320.13 Aligned_cols=290 Identities=18% Similarity=0.297 Sum_probs=238.4
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcc----------cC--------------cccccccceEEecCCCCeee
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI----------IN--------------ENRDIHYPVVEMASRSKLSS 622 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~----------~~--------------~~~~~~~~~~~~~~~~~I~~ 622 (886)
....|+|+.|++|+.++|.|-.|..|++|.+... .. ............+|.++|..
T Consensus 377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 3558999999999999999999999999998730 00 00011122336789999999
Q ss_pred EEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCce
Q 002736 623 ICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVS 702 (886)
Q Consensus 623 l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~ 702 (886)
+.|+| +..+|+|||.|++|++|.+.+..++..+++|..+||++.|+| .|-+|||||.|++.+||.... ..+
T Consensus 457 ~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~-------~~P 527 (707)
T KOG0263|consen 457 CSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDH-------NKP 527 (707)
T ss_pred eeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeeccc-------CCc
Confidence 99999 799999999999999999999999999999999999999999 899999999999999999887 344
Q ss_pred eeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEe
Q 002736 703 IGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWD 780 (886)
Q Consensus 703 ~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd 780 (886)
...+. |-+.|.|++|+|+ .+++++||.|.+|++||+.++.. ++.|.||..+|.+++|+ +|.+|+||+.||.|++||
T Consensus 528 lRifaghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~-VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWD 605 (707)
T KOG0263|consen 528 LRIFAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNS-VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWD 605 (707)
T ss_pred hhhhcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcE-EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEE
Confidence 44443 4577999999999 89999999999999999999985 99999999999999998 999999999999999999
Q ss_pred CCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcc-----eeeccCCC------CCCCCC
Q 002736 781 LSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA-----LSFNFNHA------DPLSGP 849 (886)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~-----~~~~~~~~------~~~~~~ 849 (886)
+.++ .++..+.+|++.|.++.||.+|..||+||.|++|++||+...... .+...... +...-.
T Consensus 606 l~~~------~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llg 679 (707)
T KOG0263|consen 606 LANG------SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLG 679 (707)
T ss_pred cCCC------cchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceee
Confidence 9998 568999999999999999999999999999999999998764333 00010000 000001
Q ss_pred ccccCCCcEEEEEEccCCCcEEEEE
Q 002736 850 ETDDAAQFISSVCWRGQSSNTLVAA 874 (886)
Q Consensus 850 ~~~~~~~~V~~v~~s~~~~~~l~s~ 874 (886)
.+..-..+|..|.|...+- .|++|
T Consensus 680 s~~tK~tpv~~l~FtrrNl-~L~~g 703 (707)
T KOG0263|consen 680 SFYTKNTPVVGLHFTRRNL-LLAVG 703 (707)
T ss_pred eeeecCceEEEEEEeccce-eEEec
Confidence 1234456788888877654 45444
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-37 Score=321.81 Aligned_cols=209 Identities=20% Similarity=0.290 Sum_probs=171.1
Q ss_pred cCceeecccc-cccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 27 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
|+...+...| |+|+|.++. +..+. ...+|++|||..-+|.++|+.+++.|++..++.|+.||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~E-vi~d~--~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKE-VIRDN--DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHH-Hhhcc--CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 4445566677 999999888 44332 2289999999999999999888899999999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+|||+.....|||+|||+|+...+..
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Skp------------------------------------------------- 164 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSKP------------------------------------------------- 164 (538)
T ss_pred ccCChhheEecccceeEecccccccccccCC-------------------------------------------------
Confidence 9999999999988899999999997653221
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~e 264 (886)
..|.++-|.||+|||++.... |+.+.|||++|||++|
T Consensus 165 ------------------------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 165 ------------------------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ------------------------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 245578899999999998754 9999999999999999
Q ss_pred Hhc--CCCCCchhhHHhHhhccC---------------------CCC--------hhhhccChhhHHHHHHccCCCCCCC
Q 002736 265 LFC--PFSTGEEKTRTMSSLRHR---------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 265 Ll~--pf~~~~~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~R 313 (886)
|.+ |.+++....+.+..+.+- .+| ..+...++++..+|.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 999 887776665554433221 011 1123356778899999999999999
Q ss_pred CCHHHHhcCCCCCCCc
Q 002736 314 PKMGELLQSEFLNEPR 329 (886)
Q Consensus 314 ps~~eil~h~~~~~~~ 329 (886)
|||.|+|+||||+...
T Consensus 283 pTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 283 PTASQALQHPFFQVGR 298 (538)
T ss_pred ccHHHHhcCccccccc
Confidence 9999999999998753
No 18
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3e-34 Score=288.76 Aligned_cols=290 Identities=19% Similarity=0.318 Sum_probs=249.6
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcE
Q 002736 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (886)
Q Consensus 563 ~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V 642 (886)
.+.+|.+.|.|+++.|.+++|+||+.|++|+|||+.+.. .-....+|...|..+++++ ...+++|++.|+.|
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~-------LkltltGhi~~vr~vavS~-rHpYlFs~gedk~V 217 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ-------LKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQV 217 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe-------EEEeecchhheeeeeeecc-cCceEEEecCCCee
Confidence 456899999999999999999999999999999998742 2233446889999999998 57799999999999
Q ss_pred EEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCC
Q 002736 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDS 721 (886)
Q Consensus 643 ~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~ 721 (886)
+.||++.++.++.|.+|-..|.|++.+| .-..|++|+.|.+++|||+++ ...+..+. |...|+.|.+.|-
T Consensus 218 KCwDLe~nkvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRt-------r~~V~~l~GH~~~V~~V~~~~~- 288 (460)
T KOG0285|consen 218 KCWDLEYNKVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRT-------RASVHVLSGHTNPVASVMCQPT- 288 (460)
T ss_pred EEEechhhhhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecc-------cceEEEecCCCCcceeEEeecC-
Confidence 9999999999999999999999999999 778999999999999999999 77788887 5677999999988
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT 800 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~ 800 (886)
.-.+++||.|++|++||++.++. ..++..|+..|.+++.+ ....+||+|.| .|+-|++..+ ..+..+.+|.
T Consensus 289 dpqvit~S~D~tvrlWDl~agkt-~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g------~f~~nlsgh~ 360 (460)
T KOG0285|consen 289 DPQVITGSHDSTVRLWDLRAGKT-MITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG------EFLQNLSGHN 360 (460)
T ss_pred CCceEEecCCceEEEeeeccCce-eEeeecccceeeEEecCCchhhhhccCCc-cceeccCCcc------chhhcccccc
Confidence 45699999999999999999995 88899999999999997 66778888876 6999999987 4477899999
Q ss_pred CceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCE
Q 002736 801 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNI 880 (886)
Q Consensus 801 ~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I 880 (886)
..|++++...|| ++++|+++|.+.+||..++-..+.... . .+...-+....|.+.||...+. .|++|..|.+|
T Consensus 361 ~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t---~--vqpGSl~sEagI~as~fDktg~-rlit~eadKtI 433 (460)
T KOG0285|consen 361 AIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQT---I--VQPGSLESEAGIFASCFDKTGS-RLITGEADKTI 433 (460)
T ss_pred ceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccc---c--ccCCccccccceeEEeecccCc-eEEeccCCcce
Confidence 999999988765 889999999999999998755443311 1 1111123455699999999999 99999999999
Q ss_pred EEEE
Q 002736 881 KILE 884 (886)
Q Consensus 881 ~iw~ 884 (886)
++|.
T Consensus 434 k~~k 437 (460)
T KOG0285|consen 434 KMYK 437 (460)
T ss_pred EEEe
Confidence 9996
No 19
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-36 Score=297.63 Aligned_cols=195 Identities=19% Similarity=0.223 Sum_probs=162.1
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhh---cCCCCCcChHHHHHHHHHHHHHHHhhcc--cC
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS--QG 102 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l---~~~~~~l~~~~~~~i~~qi~~~l~~lHs--~g 102 (886)
.-+|.+.+|+|+|.+|. .....+...++|+||| .+|+|.+.| ++..+.+++..++.+|.|++.||..+|+ ..
T Consensus 69 i~lLkQL~HpNIVqYy~--~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r 146 (375)
T KOG0591|consen 69 ISLLKQLNHPNIVQYYA--HSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPR 146 (375)
T ss_pred HHHHHhcCCchHHHHHH--HhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccc
Confidence 34577899999999776 2222234568899999 889999988 3556789999999999999999999999 45
Q ss_pred --eeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 103 --IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 103 --iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
|+||||||.||+|+.+|.||++|||+++.+.+...
T Consensus 147 ~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t------------------------------------------- 183 (375)
T KOG0591|consen 147 GTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT------------------------------------------- 183 (375)
T ss_pred cceeeccCcchheEEcCCCceeeccchhHhHhcchhH-------------------------------------------
Confidence 99999999999999999999999999976543210
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
....++|||+|||||.+.+.+|+++||||||||
T Consensus 184 -----------------------------------------------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGC 216 (375)
T KOG0591|consen 184 -----------------------------------------------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGC 216 (375)
T ss_pred -----------------------------------------------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHH
Confidence 123359999999999999999999999999999
Q ss_pred HHHHHhc---CCCCCchhhHHhHhhccCCCChhh-hccChhhHHHHHHccCCCCCCCCCH
Q 002736 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 261 il~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
++|||.. ||.+. .-......+.+..+||.+ ...+.++..+|..|+..||..||+.
T Consensus 217 llyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 217 LLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 9999988 77665 555666777777887777 4456778899999999999999986
No 20
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.5e-34 Score=290.78 Aligned_cols=284 Identities=20% Similarity=0.286 Sum_probs=253.9
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+.+|..+|+.+-|+|+-.++|+++.|.+|++||+.+...+ ....+|...|.+|+|+. .+.++|+++.|-.++
T Consensus 104 l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e-------~~LrGHt~sv~di~~~a-~Gk~l~tcSsDl~~~ 175 (406)
T KOG0295|consen 104 LAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELE-------RSLRGHTDSVFDISFDA-SGKYLATCSSDLSAK 175 (406)
T ss_pred hhccccceeeeeeccCceEEEEecCCceEEEEEccchhhh-------hhhhccccceeEEEEec-CccEEEecCCccchh
Confidence 4679999999999999999999999999999999874321 12236888899999998 689999999999999
Q ss_pred EEECCC-ceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCC
Q 002736 644 VWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDS 721 (886)
Q Consensus 644 iWd~~t-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~ 721 (886)
+||..+ .++++.+.+|...|.++.|.| .++++++|+.|.+|+.|++.+ +.++.++.. ...|..++.+.|
T Consensus 176 LWd~~~~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~t-------g~cv~t~~~h~ewvr~v~v~~D- 246 (406)
T KOG0295|consen 176 LWDFDTFFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDT-------GYCVKTFPGHSEWVRMVRVNQD- 246 (406)
T ss_pred heeHHHHHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEeccc-------ceeEEeccCchHhEEEEEecCC-
Confidence 999987 467777889999999999999 789999999999999999999 888888875 456999999999
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-----------CC-----CEEEEEECCCcEEEEeCCCCC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-----------DA-----TTLVSASTDNTLKLWDLSMCT 785 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-----------~~-----~~l~sgs~Dg~i~lwd~~~~~ 785 (886)
|.++|+++.|.+|++|-+.+.+ +...++.|+-+|-+++|. .+ .+++++|.|++|++||+.++
T Consensus 247 Gti~As~s~dqtl~vW~~~t~~-~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg- 324 (406)
T KOG0295|consen 247 GTIIASCSNDQTLRVWVVATKQ-CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG- 324 (406)
T ss_pred eeEEEecCCCceEEEEEeccch-hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC-
Confidence 9999999999999999999886 478899999999999981 22 58999999999999999998
Q ss_pred ccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEcc
Q 002736 786 SRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRG 865 (886)
Q Consensus 786 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~ 865 (886)
.++.++.||.++|..++|+|.|+||+++.+|+++++||+.+..++... +.|..+|++++|+.
T Consensus 325 -----~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~-------------~ah~hfvt~lDfh~ 386 (406)
T KOG0295|consen 325 -----MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL-------------EAHEHFVTSLDFHK 386 (406)
T ss_pred -----eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc-------------CCCcceeEEEecCC
Confidence 459999999999999999999999999999999999999998777433 46788999999999
Q ss_pred CCCcEEEEEeCCCCEEEEEe
Q 002736 866 QSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 866 ~~~~~l~s~~~dg~I~iw~l 885 (886)
+.+ +++||+.|.++++|+.
T Consensus 387 ~~p-~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 387 TAP-YVVTGSVDQTVKVWEC 405 (406)
T ss_pred CCc-eEEeccccceeeeeec
Confidence 999 9999999999999974
No 21
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-36 Score=308.76 Aligned_cols=205 Identities=19% Similarity=0.245 Sum_probs=167.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+||-++.+.+ .......+|+++|| .||.|+-.|.+. +.+++..++.|+..|+.||.|||++|||||||
T Consensus 77 ~IL~~v~hPFiv~l~y----sFQt~~kLylVld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDl 151 (357)
T KOG0598|consen 77 NILSKIKHPFIVKLIY----SFQTEEKLYLVLDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLHSKGIIYRDL 151 (357)
T ss_pred HHHHhCCCCcEeeeEE----ecccCCeEEEEEeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 3455589999999888 33456778999999 999999999554 78999999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||||+..|+++++|||+|+....+..
T Consensus 152 KPENILLd~~GHi~LtDFgL~k~~~~~~~--------------------------------------------------- 180 (357)
T KOG0598|consen 152 KPENILLDEQGHIKLTDFGLCKEDLKDGD--------------------------------------------------- 180 (357)
T ss_pred CHHHeeecCCCcEEEeccccchhcccCCC---------------------------------------------------
Confidence 99999999999999999999964322210
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
...+.+||+.|||||++.+..|+.++|+|||||++|||++
T Consensus 181 ---------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G 221 (357)
T KOG0598|consen 181 ---------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTG 221 (357)
T ss_pred ---------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhC
Confidence 1122599999999999999999999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC----CHHHHhcCCCCCCCcC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPRD 330 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----s~~eil~h~~~~~~~~ 330 (886)
||.. +.....+..+.....+......++++.+++.++|..||++|. .+.++.+||||.....
T Consensus 222 ~pPF~~-~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 222 KPPFYA-EDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred CCCCcC-ccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 6654 444444444444443333333568889999999999999995 6889999999998654
No 22
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-35 Score=322.74 Aligned_cols=209 Identities=21% Similarity=0.277 Sum_probs=171.6
Q ss_pred ccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccC
Q 002736 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (886)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (886)
+-|++.+.+-=.+|+|++.+|. ++++ ...+|++.|| .||.|+++|-+. +++++.++.++|+||+.||.|+|..+
T Consensus 58 ~IerEIviMkLi~HpnVl~Lyd-Vwe~---~~~lylvlEyv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~~ 132 (786)
T KOG0588|consen 58 GIEREIVIMKLIEHPNVLRLYD-VWEN---KQHLYLVLEYVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAFN 132 (786)
T ss_pred chhhhhHHHHHhcCCCeeeeee-eecc---CceEEEEEEecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 4556666666678999999998 6653 4567777888 999999999554 68999999999999999999999999
Q ss_pred eeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 103 iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|+||||||+|+||+..+++||+|||+|...-.+.
T Consensus 133 icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk---------------------------------------------- 166 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK---------------------------------------------- 166 (786)
T ss_pred ceeccCCchhhhhhcccCEeeeccceeecccCCc----------------------------------------------
Confidence 9999999999999999999999999995332111
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCC-CcccccchHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 261 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDIwSlGvi 261 (886)
-..+.||+|+|+|||++.|.+| +.++||||+|||
T Consensus 167 ---------------------------------------------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVI 201 (786)
T KOG0588|consen 167 ---------------------------------------------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVI 201 (786)
T ss_pred ---------------------------------------------cccccCCCcccCCchhhcCCCCCCCccccchhHHH
Confidence 1122399999999999999997 789999999999
Q ss_pred HHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
||.||+ ||..++-+....+ +..+.+ ..+...++++.+||.+||..||++|+|++||++|||+.+...
T Consensus 202 LfALLtG~LPFdDdNir~LLlK-V~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 202 LFALLTGKLPFDDDNIRVLLLK-VQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred HHHHHhCCCCCCCccHHHHHHH-HHcCcc-cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 999999 9986655554444 444433 223567799999999999999999999999999999876543
No 23
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1.4e-32 Score=268.19 Aligned_cols=293 Identities=22% Similarity=0.330 Sum_probs=235.9
Q ss_pred ccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcE
Q 002736 564 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d-~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V 642 (886)
+.+|.+.|-+++|+|- |..|||||.|+.|+||+.... . ......+..-+|+..|..++|+| .+++||++|+|.++
T Consensus 10 ~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~-~--s~~ck~vld~~hkrsVRsvAwsp-~g~~La~aSFD~t~ 85 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG-D--SWTCKTVLDDGHKRSVRSVAWSP-HGRYLASASFDATV 85 (312)
T ss_pred ecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC-C--cEEEEEeccccchheeeeeeecC-CCcEEEEeeccceE
Confidence 4679999999999997 899999999999999998741 1 01112233346899999999999 79999999999999
Q ss_pred EEEECCCc--eEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeC
Q 002736 643 QVWDVSRS--QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPL 719 (886)
Q Consensus 643 ~iWd~~t~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp 719 (886)
.||.-..+ +++..+++|+..|.|++|++ ++++||+|+.|.+|-||.+..... -.+...+. |...|..|.|+|
T Consensus 86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddE----fec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 86 VIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDE----FECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred EEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCc----EEEEeeeccccccccEEEEcC
Confidence 99987654 68899999999999999997 999999999999999999985322 22333333 567799999999
Q ss_pred CCCcEEEEEeCCCeEEEEecCCC--CcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEe
Q 002736 720 DSGRSLAFGSADHRIYYYDLRNS--KIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 796 (886)
Q Consensus 720 ~~~~~l~~gs~Dg~I~vwDlr~~--~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~ 796 (886)
. ..+|+++|+|++|++|+-... -..+.++.+|...|.+++|. .|..|++++.|++++||-....- -
T Consensus 161 t-~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~----------~ 229 (312)
T KOG0645|consen 161 T-EDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL----------S 229 (312)
T ss_pred C-cceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc----------c
Confidence 8 789999999999999986522 13578999999999999997 68999999999999999976431 1
Q ss_pred ecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCC--CcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEE
Q 002736 797 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP--MPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 874 (886)
Q Consensus 797 ~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~ 874 (886)
.-|...+..+.|. ...||+|+.|+.|++|.-... .|...+ .......|..-|++|+|.|..+..|+++
T Consensus 230 ~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l--------~~~~~~aHe~dVNsV~w~p~~~~~L~s~ 299 (312)
T KOG0645|consen 230 GMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNL--------LAKKEGAHEVDVNSVQWNPKVSNRLASG 299 (312)
T ss_pred hhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHH--------HHhhhcccccccceEEEcCCCCCceeec
Confidence 2367789999998 679999999999999986632 111111 1122356777899999999633389999
Q ss_pred eCCCCEEEEEeC
Q 002736 875 NSSGNIKILEMV 886 (886)
Q Consensus 875 ~~dg~I~iw~l~ 886 (886)
++||.|++|.+.
T Consensus 300 ~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 300 GDDGIVNFWELE 311 (312)
T ss_pred CCCceEEEEEec
Confidence 999999999873
No 24
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-35 Score=320.61 Aligned_cols=201 Identities=23% Similarity=0.279 Sum_probs=165.2
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...-....|+|+|+++. +.+ ..+..||+.|+ ..++|.+++++ .+.++|.|+++|++||+.||.|||++||||||
T Consensus 69 IeIHr~L~HpnIV~f~~-~FE---Ds~nVYivLELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~IiHRD 143 (592)
T KOG0575|consen 69 IEIHRSLKHPNIVQFYH-FFE---DSNNVYIVLELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD 143 (592)
T ss_pred HHHHHhcCCCcEEeeee-Eee---cCCceEEEEEecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 33445578999999888 333 34667888888 77899999974 47899999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
||..||||+.+.+|||+|||+|.....+..
T Consensus 144 LKLGNlfL~~~~~VKIgDFGLAt~le~~~E-------------------------------------------------- 173 (592)
T KOG0575|consen 144 LKLGNLFLNENMNVKIGDFGLATQLEYDGE-------------------------------------------------- 173 (592)
T ss_pred cchhheeecCcCcEEecccceeeeecCccc--------------------------------------------------
Confidence 999999999999999999999976543310
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
+..+.||||-|.|||++.....++.+||||+||+||-||.
T Consensus 174 ----------------------------------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~ 213 (592)
T KOG0575|consen 174 ----------------------------------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLV 213 (592)
T ss_pred ----------------------------------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhh
Confidence 1233599999999999999889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccC-CCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
||.+..-.. .+..+... ...|. ..+.++++||.+||.+||.+|||+++||.|+||..
T Consensus 214 G~PPFetk~vke-ty~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 214 GRPPFETKTVKE-TYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred CCCCcccchHHH-HHHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 665554444 44444443 33333 56688999999999999999999999999999954
No 25
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=314.71 Aligned_cols=211 Identities=18% Similarity=0.200 Sum_probs=164.5
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|+-++.+|+ ... +...+|.++|| .+|+|.++|++- +.|++..+++|+.||++||+|||++|||||||||+|||
T Consensus 132 ~hPgivkLy~-TFQ---D~~sLYFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENIL 206 (604)
T KOG0592|consen 132 GHPGIVKLYF-TFQ---DEESLYFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENIL 206 (604)
T ss_pred CCCCeEEEEE-Eee---cccceEEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhhee
Confidence 7888888888 333 34557788888 999999999665 78999999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
|+.++++||+|||.|+.+........ ++.
T Consensus 207 Ld~dmhikITDFGsAK~l~~~~~~~~-------------------------------~~~-------------------- 235 (604)
T KOG0592|consen 207 LDKDGHIKITDFGSAKILSPSQKSQE-------------------------------NPV-------------------- 235 (604)
T ss_pred EcCCCcEEEeeccccccCChhhcccc-------------------------------Ccc--------------------
Confidence 99999999999999986643311000 000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
...+.. .....++||..|.+||++.....++++|||+||||||.|+. ||..
T Consensus 236 -------------------------~~~~a~-s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra 289 (604)
T KOG0592|consen 236 -------------------------DPNQAS-SRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA 289 (604)
T ss_pred -------------------------Cccccc-CcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence 000000 01233599999999999999999999999999999999999 7766
Q ss_pred CchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
.++-.....++.-..- .+.+.++.+.+|+.++|..||.+|+|++||.+||||.....
T Consensus 290 ~NeyliFqkI~~l~y~--fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 290 ANEYLIFQKIQALDYE--FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred ccHHHHHHHHHHhccc--CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 6655544444433222 22233477889999999999999999999999999998653
No 26
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=4.3e-32 Score=285.98 Aligned_cols=320 Identities=21% Similarity=0.346 Sum_probs=255.0
Q ss_pred cccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEe
Q 002736 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (886)
Q Consensus 535 ~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~ 614 (886)
..+++..|+++.|+.-.=++...++ ..|+.-|.|+.|+|||++|||+|.||+|.|||=.+...-.... -..
T Consensus 162 Ri~T~sdDn~v~ffeGPPFKFk~s~-----r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~----~~~ 232 (603)
T KOG0318|consen 162 RIATGSDDNTVAFFEGPPFKFKSSF-----REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELE----DSD 232 (603)
T ss_pred EEEeccCCCeEEEeeCCCeeeeecc-----cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEec----CCC
Confidence 4578889999999987766666555 5699999999999999999999999999999977642211110 134
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEE---------------------------------------
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE--------------------------------------- 655 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~--------------------------------------- 655 (886)
+|.+.|.+|+|+| +...++|++.|.+++|||+.+++++++
T Consensus 233 aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~ 311 (603)
T KOG0318|consen 233 AHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPS 311 (603)
T ss_pred CccccEEEEEECC-CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCC
Confidence 6999999999999 789999999999999999987654433
Q ss_pred ----ecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhc---------------------------------
Q 002736 656 ----MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH--------------------------------- 698 (886)
Q Consensus 656 ----~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~--------------------------------- 698 (886)
+.+|.+.|+++..+| ++.+|.+|+.||.|.-||+.+......
T Consensus 312 ~~~~i~GHnK~ITaLtv~~-d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~ 390 (603)
T KOG0318|consen 312 VLKVISGHNKSITALTVSP-DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVIS 390 (603)
T ss_pred hhheecccccceeEEEEcC-CCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEe
Confidence 358999999999998 889999999999999999855221100
Q ss_pred -------------cC---c--------------------------eeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q 002736 699 -------------LG---V--------------------------SIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYY 736 (886)
Q Consensus 699 -------------~~---~--------------------------~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~v 736 (886)
++ . .+..++......+++++|+ +..+++|+.|+.|++
T Consensus 391 ~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~-~~~vaVGG~Dgkvhv 469 (603)
T KOG0318|consen 391 LKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPD-GSEVAVGGQDGKVHV 469 (603)
T ss_pred cccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCC-CCEEEEecccceEEE
Confidence 00 0 0000111234568899999 899999999999999
Q ss_pred EecCCCC-cceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCE
Q 002736 737 YDLRNSK-IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGY 814 (886)
Q Consensus 737 wDlr~~~-~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~ 814 (886)
|.+.... .+...+..|..+|++|+|+ |+.+||+|...+.+.+||+.+... ......=|+..|++|+|+|+..+
T Consensus 470 ysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-----~~~~w~FHtakI~~~aWsP~n~~ 544 (603)
T KOG0318|consen 470 YSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-----KTNRWAFHTAKINCVAWSPNNKL 544 (603)
T ss_pred EEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-----ecceeeeeeeeEEEEEeCCCceE
Confidence 9998754 3455677899999999998 999999999999999999998743 12223349999999999999999
Q ss_pred EEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 815 VATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 815 lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
+||||.|-.|.||++..+......+ ..|...|+.|.|-.+. .|++++.|-+||+|.+
T Consensus 545 vATGSlDt~Viiysv~kP~~~i~ik------------nAH~~gVn~v~wlde~--tvvSsG~Da~iK~W~v 601 (603)
T KOG0318|consen 545 VATGSLDTNVIIYSVKKPAKHIIIK------------NAHLGGVNSVAWLDES--TVVSSGQDANIKVWNV 601 (603)
T ss_pred EEeccccceEEEEEccChhhheEec------------cccccCceeEEEecCc--eEEeccCcceeEEecc
Confidence 9999999999999998876543222 3465669999997654 6999999999999986
No 27
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.1e-35 Score=293.87 Aligned_cols=206 Identities=16% Similarity=0.227 Sum_probs=162.9
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
+.-.|-+..|+|.|.+.. ++. ....+++|+||+..++.+-|.+....++...++.|+.|++.|+.|+|++++||||
T Consensus 51 EIrmLKqLkH~NLVnLiE-VFr---rkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRD 126 (396)
T KOG0593|consen 51 EIRMLKQLKHENLVNLIE-VFR---RKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRD 126 (396)
T ss_pred HHHHHHhcccchHHHHHH-HHH---hcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeeccc
Confidence 334455566777766555 433 5678999999999998888877778899999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||||+.+|.+|+||||+|+.+..+.
T Consensus 127 IKPENILit~~gvvKLCDFGFAR~L~~pg--------------------------------------------------- 155 (396)
T KOG0593|consen 127 IKPENILITQNGVVKLCDFGFARTLSAPG--------------------------------------------------- 155 (396)
T ss_pred CChhheEEecCCcEEeccchhhHhhcCCc---------------------------------------------------
Confidence 99999999999999999999997553110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHh
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl 266 (886)
-..|.++-|.||+|||.+.| .+|+.++|||++||++.||+
T Consensus 156 ---------------------------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~ 196 (396)
T KOG0593|consen 156 ---------------------------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELL 196 (396)
T ss_pred ---------------------------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHh
Confidence 02355688999999999998 56999999999999999999
Q ss_pred c--CCCCCchhhHHhHhhcc---------------CC------CC-----h----hhhccChhhHHHHHHccCCCCCCCC
Q 002736 267 C--PFSTGEEKTRTMSSLRH---------------RV------LP-----P----QLLLKFPKEASFCLWLLHPEPSGRP 314 (886)
Q Consensus 267 ~--pf~~~~~~~~~~~~~~~---------------~~------~~-----~----~~~~~~~~~~~li~~~L~~dP~~Rp 314 (886)
+ |++++.........++. .. +| . ..+..+.-+.+|+..||+.||.+|+
T Consensus 197 ~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~ 276 (396)
T KOG0593|consen 197 TGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL 276 (396)
T ss_pred cCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc
Confidence 9 88777665554333221 00 01 1 1122334456999999999999999
Q ss_pred CHHHHhcCCCCCC
Q 002736 315 KMGELLQSEFLNE 327 (886)
Q Consensus 315 s~~eil~h~~~~~ 327 (886)
+.+|+|.|+||+.
T Consensus 277 sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 277 SCEQLLHHPYFDG 289 (396)
T ss_pred cHHHHhcChHHHH
Confidence 9999999999954
No 28
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=6.2e-33 Score=288.96 Aligned_cols=288 Identities=19% Similarity=0.324 Sum_probs=244.7
Q ss_pred cCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCcccCc--c-cccccce----EEecCCCCeeeEEEeCCCCCeEEEe
Q 002736 565 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINE--N-RDIHYPV----VEMASRSKLSSICWNSYIKSQIASS 636 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~-~lat~~~d~~Ikiwd~~~~~~~--~-~~~~~~~----~~~~~~~~I~~l~~~~~~~~~las~ 636 (886)
.+|..+|++++|+|-.. ++|+|+.|-..++|++...... . .....++ ........|++++||. +++.||+|
T Consensus 175 l~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~-~G~~LatG 253 (524)
T KOG0273|consen 175 LRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNN-DGTLLATG 253 (524)
T ss_pred ccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecC-CCCeEEEe
Confidence 34999999999999655 9999999999999998741111 0 0111111 2223446799999998 79999999
Q ss_pred cCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCe-EEE
Q 002736 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANV-CCV 715 (886)
Q Consensus 637 s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v-~~v 715 (886)
++||.++||+. .+..+..+..|.++|.++.|+. .++++++++-|+++.|||..+ +...+.+..+..+ ..|
T Consensus 254 ~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~~-------g~~~q~f~~~s~~~lDV 324 (524)
T KOG0273|consen 254 SEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAHT-------GTVKQQFEFHSAPALDV 324 (524)
T ss_pred ecCcEEEEEec-CchhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEeccC-------ceEEEeeeeccCCccce
Confidence 99999999997 4667788899999999999996 999999999999999999988 6666666655554 778
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCce
Q 002736 716 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLH 794 (886)
Q Consensus 716 ~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~ 794 (886)
.|-.+ ..|++.+.|+.|+++-+.... |+.++.+|...|.+++|. .+.+|+|+|.|++++||...... ...
T Consensus 325 dW~~~--~~F~ts~td~~i~V~kv~~~~-P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~------~~~ 395 (524)
T KOG0273|consen 325 DWQSN--DEFATSSTDGCIHVCKVGEDR-PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN------SVH 395 (524)
T ss_pred EEecC--ceEeecCCCceEEEEEecCCC-cceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc------chh
Confidence 99765 579999999999999997665 799999999999999996 88999999999999999987763 478
Q ss_pred EeecCCCceeEEEEecCCC---------EEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEcc
Q 002736 795 SFTGHTNVKNFVGLSVWDG---------YVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRG 865 (886)
Q Consensus 795 ~~~~h~~~v~~v~~sp~g~---------~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~ 865 (886)
.+.+|..+|..+.|+|.|. .+|+++.|++|++||+..+.++..|. .|..+|++|+|+|
T Consensus 396 ~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~-------------kH~~pVysvafS~ 462 (524)
T KOG0273|consen 396 DLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM-------------KHQEPVYSVAFSP 462 (524)
T ss_pred hhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec-------------cCCCceEEEEecC
Confidence 8999999999999999864 79999999999999999999987653 4677899999999
Q ss_pred CCCcEEEEEeCCCCEEEEEe
Q 002736 866 QSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 866 ~~~~~l~s~~~dg~I~iw~l 885 (886)
+|. ++|+|+-||.|+||+.
T Consensus 463 ~g~-ylAsGs~dg~V~iws~ 481 (524)
T KOG0273|consen 463 NGR-YLASGSLDGCVHIWST 481 (524)
T ss_pred CCc-EEEecCCCCeeEeccc
Confidence 999 9999999999999974
No 29
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=6e-32 Score=295.32 Aligned_cols=319 Identities=19% Similarity=0.356 Sum_probs=269.9
Q ss_pred ccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEEcCcccCcccccccceEEe
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECDAIINENRDIHYPVVEM 614 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d-~~Ikiwd~~~~~~~~~~~~~~~~~~ 614 (886)
.+.||..|...++.+....++..|.- ...+|..+.|+..|+.||.|+.. |.+-||++... .+.....
T Consensus 280 lvvgFssG~f~LyelP~f~lih~LSi-----s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE-------sYVlKQQ 347 (893)
T KOG0291|consen 280 LVVGFSSGEFGLYELPDFNLIHSLSI-----SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE-------SYVLKQQ 347 (893)
T ss_pred EEEEecCCeeEEEecCCceEEEEeec-----ccceeeEEEecccCCEEEEcCCccceEEEEEeecc-------ceeeecc
Confidence 47889999999999999999888743 35689999999999999998764 89999999763 4455566
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhh
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~ 694 (886)
+|...++|++++| +++++|+|+.||.|+|||..++-|+.+|.+|+..|+.+.|+. .++.+++.|-||+|+.||+..
T Consensus 348 gH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVRAwDlkR-- 423 (893)
T KOG0291|consen 348 GHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKR-- 423 (893)
T ss_pred ccccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEEeeeecc--
Confidence 7999999999999 799999999999999999999999999999999999999996 999999999999999999988
Q ss_pred hhhccCceeeeeecCC--CeEEEEEeCCCCcEEEEEeCCC-eEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEE
Q 002736 695 LLLHLGVSIGTIKTKA--NVCCVQFPLDSGRSLAFGSADH-RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSA 770 (886)
Q Consensus 695 ~~~~~~~~~~~~~~~~--~v~~v~~sp~~~~~l~~gs~Dg-~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sg 770 (886)
.....++..+. +..||+..|. |.++++|+.|. .|++|++.+++. +..+.||+++|.+++|+ .+..|+||
T Consensus 424 -----YrNfRTft~P~p~QfscvavD~s-GelV~AG~~d~F~IfvWS~qTGql-lDiLsGHEgPVs~l~f~~~~~~LaS~ 496 (893)
T KOG0291|consen 424 -----YRNFRTFTSPEPIQFSCVAVDPS-GELVCAGAQDSFEIFVWSVQTGQL-LDILSGHEGPVSGLSFSPDGSLLASG 496 (893)
T ss_pred -----cceeeeecCCCceeeeEEEEcCC-CCEEEeeccceEEEEEEEeecCee-eehhcCCCCcceeeEEccccCeEEec
Confidence 56666665544 4689999999 88999999886 499999999995 99999999999999997 89999999
Q ss_pred ECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCC-
Q 002736 771 STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP- 849 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~- 849 (886)
|+|.+||+||+-.... .+.++. +...+..++|+|+|+-||++..||.|.+||......+.++..-. +...+.
T Consensus 497 SWDkTVRiW~if~s~~-----~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Idgrk-D~~~gR~ 569 (893)
T KOG0291|consen 497 SWDKTVRIWDIFSSSG-----TVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRK-DLSGGRK 569 (893)
T ss_pred cccceEEEEEeeccCc-----eeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchh-hcccccc
Confidence 9999999999976532 234443 66779999999999999999999999999998876654333211 111111
Q ss_pred -------ccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 850 -------ETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 850 -------~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
+..........+|+++||. .+++||....|++|++
T Consensus 570 ~~D~~ta~~sa~~K~Ftti~ySaDG~-~IlAgG~sn~iCiY~v 611 (893)
T KOG0291|consen 570 ETDRITAENSAKGKTFTTICYSADGK-CILAGGESNSICIYDV 611 (893)
T ss_pred ccceeehhhcccCCceEEEEEcCCCC-EEEecCCcccEEEEEC
Confidence 1123457799999999999 9999999999999985
No 30
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.9e-33 Score=268.78 Aligned_cols=283 Identities=19% Similarity=0.331 Sum_probs=239.2
Q ss_pred EEEEEcC-CCCEEEEE-------eCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 572 CSLSFDR-DGELFAAA-------GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 572 ~sl~f~~-d~~~lat~-------~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
.++.|+| -..+||.+ ...|++.|.++... ........+.....+..|+|+++..+.+++++.||+++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~-----~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLr 86 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDP-----KGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLR 86 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCC-----CCeEEEEeeecccceeEeeecCCCcceEEEEecCceEE
Confidence 5788998 22344433 23588888887631 11222344557788999999999999999999999999
Q ss_pred EEECCC-ceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecC-CCeEEEEEeCCC
Q 002736 644 VWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTK-ANVCCVQFPLDS 721 (886)
Q Consensus 644 iWd~~t-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~-~~v~~v~~sp~~ 721 (886)
|||..- ..++..+++|...|.+++|++.....++++|-||+||||+... +..+.++.++ ..|...+|+|..
T Consensus 87 l~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r-------~~Sv~Tf~gh~~~Iy~a~~sp~~ 159 (311)
T KOG0277|consen 87 LFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR-------PNSVQTFNGHNSCIYQAAFSPHI 159 (311)
T ss_pred EeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCC-------CcceEeecCCccEEEEEecCCCC
Confidence 999643 3578899999999999999998889999999999999999988 7777777754 559999999999
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
+++++++|.|+++++||+|....++. +..|...+.++.|+ +...|+||+.|+.|+.||+++.+ .|+..+.||
T Consensus 160 ~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-----~pl~eL~gh 233 (311)
T KOG0277|consen 160 PNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-----TPLFELNGH 233 (311)
T ss_pred CCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-----ccceeecCC
Confidence 99999999999999999998876444 88999999999997 88999999999999999999875 689999999
Q ss_pred CCceeEEEEecCC-CEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCC
Q 002736 800 TNVKNFVGLSVWD-GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSG 878 (886)
Q Consensus 800 ~~~v~~v~~sp~g-~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg 878 (886)
.-.|+.|.|||.. ..||++|.|-+++|||...+.... ...+.|.+||..+.|++-.+..+|+++.|+
T Consensus 234 ~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~------------e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe 301 (311)
T KOG0277|consen 234 GLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAI------------ETVDHHTEFVCGLDWSLFDPGQVASTGWDE 301 (311)
T ss_pred ceEEEEEecCcchhhHhhhccccceEEecccccchhhh------------hhhhccceEEeccccccccCceeeeccccc
Confidence 9999999999985 599999999999999987544321 234678999999999998776999999999
Q ss_pred CEEEEE
Q 002736 879 NIKILE 884 (886)
Q Consensus 879 ~I~iw~ 884 (886)
.++||+
T Consensus 302 ~l~Vw~ 307 (311)
T KOG0277|consen 302 LLYVWN 307 (311)
T ss_pred ceeeec
Confidence 999997
No 31
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=302.30 Aligned_cols=225 Identities=17% Similarity=0.185 Sum_probs=179.3
Q ss_pred ccccccCceeecccccccCCCCCCcccc-ccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
..|..++...+-|..|+|++..+.-+-. ...+..-+|+++|+.+.+|.+.|+.. ..++...+..++.||+.||.|+||
T Consensus 65 akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHS 143 (359)
T KOG0660|consen 65 AKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHS 143 (359)
T ss_pred HHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhc
Confidence 3477788888999999999988873222 12245668999999999999999654 569999999999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
.||+||||||+|++++.+..+||+|||+|+......
T Consensus 144 AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-------------------------------------------- 179 (359)
T KOG0660|consen 144 ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-------------------------------------------- 179 (359)
T ss_pred ccccccccchhheeeccCCCEEeccccceeeccccC--------------------------------------------
Confidence 999999999999999999999999999996543210
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 259 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlG 259 (886)
.....|.++.|.||+|||++.. ..||.+.||||+|
T Consensus 180 --------------------------------------------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvG 215 (359)
T KOG0660|consen 180 --------------------------------------------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVG 215 (359)
T ss_pred --------------------------------------------cccchhcceeeeeecCHHHHhccccccchhhhhhhh
Confidence 0013456789999999999876 4599999999999
Q ss_pred HHHHHHhc--CCCCCchhhHHhHhhcc------------------------------CCCChhhhccChhhHHHHHHccC
Q 002736 260 VLLFELFC--PFSTGEEKTRTMSSLRH------------------------------RVLPPQLLLKFPKEASFCLWLLH 307 (886)
Q Consensus 260 vil~eLl~--pf~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~li~~~L~ 307 (886)
|||.||++ |.+.+.+....+..+.. ..+...++...|.+.+|+.+||.
T Consensus 216 CI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~ 295 (359)
T KOG0660|consen 216 CILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLV 295 (359)
T ss_pred HHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhc
Confidence 99999999 77776554443322211 01112345567888999999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCCcCchHHH
Q 002736 308 PEPSGRPKMGELLQSEFLNEPRDSMEER 335 (886)
Q Consensus 308 ~dP~~Rps~~eil~h~~~~~~~~~~~e~ 335 (886)
.||.+|+|++|+|+||||.....+..|.
T Consensus 296 fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 296 FDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred cCccccCCHHHHhcChhhhhhcCCccCC
Confidence 9999999999999999999877666554
No 32
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-35 Score=288.99 Aligned_cols=197 Identities=16% Similarity=0.179 Sum_probs=166.1
Q ss_pred cccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCc
Q 002736 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (886)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~ 111 (886)
....||..+.+++ .....+.+|++||| .||.|..||++. +++++..++.|+.||+.||+|||+++|++|||||+
T Consensus 99 ~~v~~PFlv~l~~----t~~d~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPE 173 (355)
T KOG0616|consen 99 KAVSHPFLVKLYG----TFKDNSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPE 173 (355)
T ss_pred hhccCceeEEEEE----eeccCCeEEEEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChH
Confidence 3345777777665 34456789999999 999999999765 78999999999999999999999999999999999
Q ss_pred ceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCC
Q 002736 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (886)
Q Consensus 112 NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (886)
||||+.+|++||+|||+|+....
T Consensus 174 NiLlD~~G~iKitDFGFAK~v~~--------------------------------------------------------- 196 (355)
T KOG0616|consen 174 NLLLDQNGHIKITDFGFAKRVSG--------------------------------------------------------- 196 (355)
T ss_pred HeeeccCCcEEEEeccceEEecC---------------------------------------------------------
Confidence 99999999999999999954310
Q ss_pred ccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---C
Q 002736 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (886)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---p 268 (886)
...+.||||-|+|||++...+|+.++|+|+|||++|||++ |
T Consensus 197 ------------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pP 240 (355)
T KOG0616|consen 197 ------------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPP 240 (355)
T ss_pred ------------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 2345699999999999999999999999999999999999 8
Q ss_pred CCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCC-----CCHHHHhcCCCCCCCc
Q 002736 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR-----PKMGELLQSEFLNEPR 329 (886)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R-----ps~~eil~h~~~~~~~ 329 (886)
|+..+.......++......|. ..++++.+|+.++|+.|-.+| ....+|..||||++..
T Consensus 241 F~~~~~~~iY~KI~~~~v~fP~--~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 241 FYDDNPIQIYEKILEGKVKFPS--YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred CcCCChHHHHHHHHhCcccCCc--ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 8888775555555555544333 234889999999999999999 3568899999999753
No 33
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-34 Score=311.22 Aligned_cols=258 Identities=13% Similarity=0.151 Sum_probs=175.7
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
+.|.|++.+.- .+.+.+|++|+ .....+.+|++||| .||++..+|.+. +.|++.+++.|+.+++.|++.+|.
T Consensus 187 hV~aERdiL~~--~ds~~vVKLyY----sFQD~~~LYLiMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~ 259 (550)
T KOG0605|consen 187 HVRAERDILAE--VDSPWVVKLYY----SFQDKEYLYLIMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQ 259 (550)
T ss_pred HHHHHHHHhhh--cCCCcEEEEEE----EecCCCeeEEEEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHH
Confidence 45777776655 68888899888 33456789999999 999999999554 789999999999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
.|+|||||||+|+||+..||+||.|||+|.-+......+........... .......++....
T Consensus 260 ~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~----- 322 (550)
T KOG0605|consen 260 LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQIN------------LSEAKPSDFPKFN----- 322 (550)
T ss_pred cCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhh------------hccCCCccccccc-----
Confidence 99999999999999999999999999999654332211100000000000 0000000000000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
.....+...+ .. ..+..+.+...++ .+|||-|+|||++.+..|+..+|+|||||
T Consensus 323 ------~~~~~~~~~~--~~-------------~~w~~nrr~~a~S-----tVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 323 ------TPRSTMSRRE--QL-------------QTWKRNRRQLAYS-----TVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred ------cccchhhHHH--HH-------------HHHHhhhhhhhhc-----ccCCccccchHHHhcCCCCccccHHHHHH
Confidence 0000000000 00 0000111112222 49999999999999999999999999999
Q ss_pred HHHHHhc--CCCCCchhhHHhHhhccC---CCChhhhccChhhHHHHHHccCCCCCCCC---CHHHHhcCCCCCCCcC
Q 002736 261 LLFELFC--PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (886)
Q Consensus 261 il~eLl~--pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---s~~eil~h~~~~~~~~ 330 (886)
|+||||. |.+..+....+...+..+ ...|.-....+++.+||.+||. ||.+|. +++||.+||||.....
T Consensus 377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W 453 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW 453 (550)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence 9999999 333455555555555443 3344445566889999999999 999995 5999999999998654
No 34
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-35 Score=307.74 Aligned_cols=216 Identities=21% Similarity=0.236 Sum_probs=169.9
Q ss_pred ccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
+.+...+.+.+|+|+|..+|.....+. ..++|.||| .||+|.+++++.++.|++..++.+.+||++||.|||++|||
T Consensus 62 ~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 62 EREIRILSRLNHPNIVQYYGSSSSREN--DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred HHHHHHHHhCCCCCEEeeCCccccccC--eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 344555666779999998882122211 479999999 99999999977655899999999999999999999999999
Q ss_pred ecccCCcceeecc-CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccc
Q 002736 105 VHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (886)
Q Consensus 105 HrDlkP~NIll~~-~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 183 (886)
||||||+|||+++ ++.+||+|||+++........
T Consensus 140 H~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~--------------------------------------------- 174 (313)
T KOG0198|consen 140 HCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK--------------------------------------------- 174 (313)
T ss_pred ccCcccceEEEeCCCCeEEeccCcccccccccccc---------------------------------------------
Confidence 9999999999999 699999999998654321000
Q ss_pred ccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHH
Q 002736 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (886)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil 262 (886)
+.......||+.|||||++..+. ...++|||||||++
T Consensus 175 ------------------------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV 212 (313)
T KOG0198|consen 175 ------------------------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV 212 (313)
T ss_pred ------------------------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEE
Confidence 00111248999999999998632 34599999999999
Q ss_pred HHHhc---CCCC-CchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 263 FELFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 263 ~eLl~---pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
.||+| ||.. ................|+.+...++++.+|+.+|+..||++||||.++|+|||+.....
T Consensus 213 vEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 213 VEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 99999 6644 33344445555555566666677888999999999999999999999999999986543
No 35
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-34 Score=305.76 Aligned_cols=214 Identities=20% Similarity=0.221 Sum_probs=172.3
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
++...|-+.+|+|++++-+-+.+ . ....+|+|+||..-+|.-++..+.-+|++.+++.|++||+.||+|||++||+||
T Consensus 165 REI~ILr~l~HpNIikL~eivt~-~-~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHR 242 (560)
T KOG0600|consen 165 REIKILRRLDHPNIIKLEEIVTS-K-LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHR 242 (560)
T ss_pred HHHHHHHhcCCCcccceeeEEEe-c-CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeec
Confidence 67788888999999997773332 2 346799999999999999998887899999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
|||.+||||+.+|.+||+|||+|+.+......
T Consensus 243 DIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~------------------------------------------------ 274 (560)
T KOG0600|consen 243 DIKGSNILIDNNGVLKIADFGLARFYTPSGSA------------------------------------------------ 274 (560)
T ss_pred cccccceEEcCCCCEEeccccceeeccCCCCc------------------------------------------------
Confidence 99999999999999999999999755322100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eL 265 (886)
..|..+-|.||+|||++.|.. |+.++|+||.||||.||
T Consensus 275 -----------------------------------------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El 313 (560)
T KOG0600|consen 275 -----------------------------------------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAEL 313 (560)
T ss_pred -----------------------------------------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHH
Confidence 123347799999999999965 99999999999999999
Q ss_pred hc--CCCCCchhhHHhHhhcc---CC---------CC----------------hhhhccChhhHHHHHHccCCCCCCCCC
Q 002736 266 FC--PFSTGEEKTRTMSSLRH---RV---------LP----------------PQLLLKFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 266 l~--pf~~~~~~~~~~~~~~~---~~---------~~----------------~~~~~~~~~~~~li~~~L~~dP~~Rps 315 (886)
+. |++.+......+..+.. .+ +| ..+...++.+.+|+..||..||.+|.|
T Consensus 314 ~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t 393 (560)
T KOG0600|consen 314 FLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT 393 (560)
T ss_pred HcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc
Confidence 99 87777666555443321 10 01 112223455679999999999999999
Q ss_pred HHHHhcCCCCCCCcCc
Q 002736 316 MGELLQSEFLNEPRDS 331 (886)
Q Consensus 316 ~~eil~h~~~~~~~~~ 331 (886)
|.++|+++||...+.+
T Consensus 394 A~~aL~seyF~t~p~~ 409 (560)
T KOG0600|consen 394 ASSALQSEYFTTEPLP 409 (560)
T ss_pred HHHHhcCcccccCCCC
Confidence 9999999999665433
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=314.49 Aligned_cols=201 Identities=24% Similarity=0.348 Sum_probs=164.2
Q ss_pred eeecccc-cccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+.... |+|++.++. +... ...+|++||| .||+|.+++.+ .+++.+.+++.+|+||+.||+|||++||+|||
T Consensus 71 ~~~~~~~~HpnI~~l~e-v~~t---~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRD 145 (370)
T KOG0583|consen 71 SILRRLRSHPNIIRLLE-VFAT---PTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRD 145 (370)
T ss_pred HHHHHhccCCCEeEEEE-EEec---CCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCC
Confidence 3444455 888888777 4443 3449999999 77899999977 57899999999999999999999999999999
Q ss_pred cCCcceeeccC-CceeeeeCCccCCCC-CCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 108 VRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 108 lkP~NIll~~~-~~vki~dfg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||+|||++.+ +++||+|||++.... .+.
T Consensus 146 LK~ENilld~~~~~~Kl~DFG~s~~~~~~~~------------------------------------------------- 176 (370)
T KOG0583|consen 146 LKPENILLDGNEGNLKLSDFGLSAISPGEDG------------------------------------------------- 176 (370)
T ss_pred CCHHHEEecCCCCCEEEeccccccccCCCCC-------------------------------------------------
Confidence 99999999998 999999999996542 110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CC-cccccchHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VS-CASDIYRLGVLLF 263 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-~~sDIwSlGvil~ 263 (886)
...+.+||+.|+|||++.+.. |+ .++||||+||+||
T Consensus 177 ------------------------------------------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy 214 (370)
T KOG0583|consen 177 ------------------------------------------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILY 214 (370)
T ss_pred ------------------------------------------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHH
Confidence 112249999999999999977 85 7999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
.|++ ||...................|.+.. ++++..|+.+||..||.+|+++.+++.||||+.
T Consensus 215 ~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 215 VLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999 88775544444443444343444333 799999999999999999999999999999997
No 37
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.1e-33 Score=289.72 Aligned_cols=271 Identities=21% Similarity=0.345 Sum_probs=233.8
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
.+..++|...|...+|+..+.... -.+..|..+|+++.|+++|.++++|..+|.||+|+..-..-. ..
T Consensus 108 GRRLltgs~SGEFtLWNg~~fnFE-----tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk-------~~ 175 (464)
T KOG0284|consen 108 GRRLLTGSQSGEFTLWNGTSFNFE-----TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVK-------II 175 (464)
T ss_pred CceeEeecccccEEEecCceeeHH-----HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhH-------Hh
Confidence 467899999999999998654322 223679999999999999999999999999999987642110 11
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
.-.|...|.+++|+| ..+.++|++.||+|+|||....+.-+.+.+|.-.|.+++|+| ...++|+|++|..|++||.++
T Consensus 176 ~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVKlWDprS 253 (464)
T KOG0284|consen 176 QAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVKLWDPRS 253 (464)
T ss_pred hHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCC-ccceeEEccCCceeEeecCCC
Confidence 123558999999999 788999999999999999998888888899999999999999 778999999999999999999
Q ss_pred hhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEE
Q 002736 693 AILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVS 769 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~s 769 (886)
+.++.++. |+..|..+.|+|+ +++|+++|.|..+++||+|+.+ .+.++++|++.|+++.|+ ...+|.+
T Consensus 254 -------g~cl~tlh~HKntVl~~~f~~n-~N~Llt~skD~~~kv~DiR~mk-El~~~r~Hkkdv~~~~WhP~~~~lfts 324 (464)
T KOG0284|consen 254 -------GSCLATLHGHKNTVLAVKFNPN-GNWLLTGSKDQSCKVFDIRTMK-ELFTYRGHKKDVTSLTWHPLNESLFTS 324 (464)
T ss_pred -------cchhhhhhhccceEEEEEEcCC-CCeeEEccCCceEEEEehhHhH-HHHHhhcchhhheeeccccccccceee
Confidence 66666665 4667999999999 7999999999999999999776 499999999999999997 8889999
Q ss_pred EECCCcEEEEeCCCCCccccCCCceEe-ecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCC
Q 002736 770 ASTDNTLKLWDLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 832 (886)
Q Consensus 770 gs~Dg~i~lwd~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~ 832 (886)
|+.||.|..|.+... .|+..+ .+|...|++++|+|-|-+||+|+.|.++++|.-..+
T Consensus 325 gg~Dgsvvh~~v~~~------~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp 382 (464)
T KOG0284|consen 325 GGSDGSVVHWVVGLE------EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRP 382 (464)
T ss_pred ccCCCceEEEecccc------ccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCC
Confidence 999999999999844 333333 479999999999999999999999999999976544
No 38
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5e-32 Score=290.00 Aligned_cols=283 Identities=20% Similarity=0.273 Sum_probs=246.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+..|+..|.++.|+|....++++-.+|.+.||+.++..- ........-+|.+..|-+ -++.+++|+.|+.|+
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtm-------VksfeV~~~PvRa~kfia-RknWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTM-------VKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIR 80 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEeccccee-------eeeeeecccchhhheeee-ccceEEEecCCceEE
Confidence 345899999999999999999999999999999987311 111123566888888887 589999999999999
Q ss_pred EEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCCC
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDSG 722 (886)
Q Consensus 644 iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~ 722 (886)
|++..|++.+..|..|.+-|.++..+| ...+++|+|+|-+|++||.... -.+.+++.+ ...|.+|+|+|.+.
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~------wa~~qtfeGH~HyVMqv~fnPkD~ 153 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENE------WACEQTFEGHEHYVMQVAFNPKDP 153 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCc------eeeeeEEcCcceEEEEEEecCCCc
Confidence 999999999999999999999999999 6669999999999999999873 445566654 45699999999999
Q ss_pred cEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec---CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 723 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV---DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 723 ~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~---~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
+.+|++|-|++|++|.+.... |..++.+|.+.|+||.|. |..+|+||+.|.+|+|||..+. .+++++.||
T Consensus 154 ntFaS~sLDrTVKVWslgs~~-~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk------~CV~TLeGH 226 (794)
T KOG0276|consen 154 NTFASASLDRTVKVWSLGSPH-PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK------SCVQTLEGH 226 (794)
T ss_pred cceeeeeccccEEEEEcCCCC-CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH------HHHHHhhcc
Confidence 999999999999999999887 699999999999999996 4459999999999999999987 459999999
Q ss_pred CCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCC
Q 002736 800 TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGN 879 (886)
Q Consensus 800 ~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~ 879 (886)
++.|.++.|+|.=.+|+|||+||+|+||+..+-+...++.++- +.|+||+-.+.+. .++.|.+.|.
T Consensus 227 t~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gl-------------eRvW~I~~~k~~~-~i~vG~Deg~ 292 (794)
T KOG0276|consen 227 TNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGL-------------ERVWCIAAHKGDG-KIAVGFDEGS 292 (794)
T ss_pred cccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCC-------------ceEEEEeecCCCC-eEEEeccCCc
Confidence 9999999999999999999999999999988876666555533 3599999998888 7888888887
Q ss_pred EEE
Q 002736 880 IKI 882 (886)
Q Consensus 880 I~i 882 (886)
|.|
T Consensus 293 i~v 295 (794)
T KOG0276|consen 293 VTV 295 (794)
T ss_pred EEE
Confidence 754
No 39
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=5.4e-31 Score=281.21 Aligned_cols=283 Identities=28% Similarity=0.430 Sum_probs=244.8
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+.+|.++|++++|+|++++|++++.++.|++|++.... .......|...+.++.|++ +++.+++++.||.|+
T Consensus 5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~ 76 (289)
T cd00200 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE-------LLRTLKGHTGPVRDVAASA-DGTYLASGSSDKTIR 76 (289)
T ss_pred hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC-------cEEEEecCCcceeEEEECC-CCCEEEEEcCCCeEE
Confidence 45799999999999999999999999999999987531 1223345777888999998 568999999999999
Q ss_pred EEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCC
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSG 722 (886)
Q Consensus 644 iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~ 722 (886)
+||+.+++....+..|...+.++.|+| ++.++++++.||.|.+||+++ ......+. +...+.+++|+|+ +
T Consensus 77 i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~-~ 147 (289)
T cd00200 77 LWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVET-------GKCLTTLRGHTDWVNSVAFSPD-G 147 (289)
T ss_pred EEEcCcccceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCC-------cEEEEEeccCCCcEEEEEEcCc-C
Confidence 999999888888989999999999998 678888888899999999987 45555555 5567999999999 7
Q ss_pred cEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCC
Q 002736 723 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 801 (886)
Q Consensus 723 ~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~ 801 (886)
.++++++.|+.|++||+++.+ ++..+..|...|.++.|+ ++..+++++.|+.|++||++.. .++..+.+|..
T Consensus 148 ~~l~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~------~~~~~~~~~~~ 220 (289)
T cd00200 148 TFVASSSQDGTIKLWDLRTGK-CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG------KCLGTLRGHEN 220 (289)
T ss_pred CEEEEEcCCCcEEEEEccccc-cceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCC------ceecchhhcCC
Confidence 888888889999999999776 477888999999999997 7779999999999999999876 44677778999
Q ss_pred ceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEE
Q 002736 802 VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 881 (886)
Q Consensus 802 ~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~ 881 (886)
.+.++.|+|++.++++++.|+.|++|++..++++..+. .|...|.+++|+|++. .|++++.||.|+
T Consensus 221 ~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~-~l~~~~~d~~i~ 286 (289)
T cd00200 221 GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS-------------GHTNSVTSLAWSPDGK-RLASGSADGTIR 286 (289)
T ss_pred ceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc-------------ccCCcEEEEEECCCCC-EEEEecCCCeEE
Confidence 99999999999999999999999999998877665443 3445799999999999 999999999999
Q ss_pred EEE
Q 002736 882 ILE 884 (886)
Q Consensus 882 iw~ 884 (886)
+|+
T Consensus 287 iw~ 289 (289)
T cd00200 287 IWD 289 (289)
T ss_pred ecC
Confidence 996
No 40
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=273.43 Aligned_cols=197 Identities=20% Similarity=0.231 Sum_probs=159.6
Q ss_pred ccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcc
Q 002736 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (886)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~N 112 (886)
...||+++++-. .-.+....|+++|+ .|++|..-|-+. ..+++..+-++++||+++|+|+|.+||||||+||+|
T Consensus 66 ~LqHP~IvrL~~----ti~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~n 140 (355)
T KOG0033|consen 66 KLQHPNIVRLHD----SIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPEN 140 (355)
T ss_pred hcCCCcEeehhh----hhcccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhh
Confidence 356777777555 22245667888888 999987766333 457999999999999999999999999999999999
Q ss_pred eeeccC---CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 113 FVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 113 Ill~~~---~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
+||.+. --+|++|||++.+.+...
T Consensus 141 llLASK~~~A~vKL~~FGvAi~l~~g~----------------------------------------------------- 167 (355)
T KOG0033|consen 141 LLLASKAKGAAVKLADFGLAIEVNDGE----------------------------------------------------- 167 (355)
T ss_pred eeeeeccCCCceeecccceEEEeCCcc-----------------------------------------------------
Confidence 999643 359999999997654111
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....+|||.|||||++...+|+..+|||+.|||||-||.
T Consensus 168 --------------------------------------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~ 209 (355)
T KOG0033|consen 168 --------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 209 (355)
T ss_pred --------------------------------------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCC
Confidence 1112389999999999999999999999999999999998
Q ss_pred -CCCCCchhhHHhHhhccC---CCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
||. ++...+.+..+... ..++.|....+.+++|+.+||..||.+|+|+.|+|+|||+..
T Consensus 210 ~PF~-~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 210 PPFW-DEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred CCCC-CccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 665 44445555555543 345688899999999999999999999999999999999985
No 41
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4.7e-32 Score=296.35 Aligned_cols=311 Identities=16% Similarity=0.254 Sum_probs=262.5
Q ss_pred ccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEe
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFD-RDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~-~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~ 614 (886)
.+.-..|..+.++|..++++...+ .|-.+.|.+++|- |+.+++|.|+..+.+|+|++.+... ....
T Consensus 296 ~l~vtaeQnl~l~d~~~l~i~k~i-----vG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c--------~ii~ 362 (775)
T KOG0319|consen 296 LLLVTAEQNLFLYDEDELTIVKQI-----VGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYC--------QIIP 362 (775)
T ss_pred eEEEEccceEEEEEccccEEehhh-----cCCchhheeeeecCCccceEEEEeCCCceEEEecCCCce--------EEEe
Confidence 344455777888899998877555 5667788888875 6789999999999999998876422 2556
Q ss_pred cCCCCeeeEE-EeCCCCCeEEEecCCCcEEEEECCCc----eEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEe
Q 002736 615 ASRSKLSSIC-WNSYIKSQIASSNFEGVVQVWDVSRS----QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (886)
Q Consensus 615 ~~~~~I~~l~-~~~~~~~~las~s~Dg~V~iWd~~t~----~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd 689 (886)
+|...|.++. |. ++.+|+||+.|.+|++|.++.+ -++....+|...|.+|+++......|+++|.|+++++|+
T Consensus 363 GH~e~vlSL~~~~--~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~ 440 (775)
T KOG0319|consen 363 GHTEAVLSLDVWS--SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWD 440 (775)
T ss_pred Cchhheeeeeecc--cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEec
Confidence 8999999998 54 4689999999999999977443 245667889999999999875678999999999999999
Q ss_pred CchhhhhhccCcee----eeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CC
Q 002736 690 INQAILLLHLGVSI----GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DA 764 (886)
Q Consensus 690 ~~~~~~~~~~~~~~----~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~ 764 (886)
+........ .... ....|...|+||+.+|+ ..+||+||.|.+.++|++.+... +.++.||+..|++|.|+ ..
T Consensus 441 l~~s~~~~~-~~~~~~~~t~~aHdKdIN~Vaia~n-dkLiAT~SqDktaKiW~le~~~l-~~vLsGH~RGvw~V~Fs~~d 517 (775)
T KOG0319|consen 441 LPKSKETAF-PIVLTCRYTERAHDKDINCVAIAPN-DKLIATGSQDKTAKIWDLEQLRL-LGVLSGHTRGVWCVSFSKND 517 (775)
T ss_pred CCCcccccc-cceehhhHHHHhhcccccceEecCC-CceEEecccccceeeecccCceE-EEEeeCCccceEEEEecccc
Confidence 987221111 0000 11225678999999999 79999999999999999997774 89999999999999998 77
Q ss_pred CEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCC
Q 002736 765 TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHAD 844 (886)
Q Consensus 765 ~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~ 844 (886)
+.++|+|.|.+|+||.+.+. .++.+|.||++.|.-+.|-.+|..|++++.||.+++|++.+.+++.+
T Consensus 518 q~laT~SgD~TvKIW~is~f------SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~t------- 584 (775)
T KOG0319|consen 518 QLLATCSGDKTVKIWSISTF------SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMT------- 584 (775)
T ss_pred ceeEeccCCceEEEEEeccc------eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhh-------
Confidence 89999999999999999998 45999999999999999999999999999999999999999888754
Q ss_pred CCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 845 PLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 845 ~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
.+.|...|+++.-++... +++||+.||.|.+|.
T Consensus 585 ------lD~H~DrvWaL~~~~~~~-~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 585 ------LDAHNDRVWALSVSPLLD-MFVTGGGDGRIIFWK 617 (775)
T ss_pred ------hhhccceeEEEeecCccc-eeEecCCCeEEEEee
Confidence 467888999999999999 999999999999995
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-34 Score=289.15 Aligned_cols=211 Identities=19% Similarity=0.243 Sum_probs=165.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+.+..|+|++..=--+-. .+.+.+|++|||+..+|+.+|..-..++...+++.++.|++.||.|||..+|+|||||
T Consensus 127 niLl~~~H~NIV~vkEVVvG--~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK 204 (419)
T KOG0663|consen 127 NILLKARHPNIVEVKEVVVG--SNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLK 204 (419)
T ss_pred HHHHhcCCCCeeeeEEEEec--cccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccc
Confidence 34445568887653331111 2466799999999999999998777889999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|+|++..|.+||+|||+|+.++++-.
T Consensus 205 ~SNLLm~~~G~lKiaDFGLAR~ygsp~k---------------------------------------------------- 232 (419)
T KOG0663|consen 205 TSNLLLSHKGILKIADFGLAREYGSPLK---------------------------------------------------- 232 (419)
T ss_pred hhheeeccCCcEEecccchhhhhcCCcc----------------------------------------------------
Confidence 9999999999999999999988765510
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~- 267 (886)
..|..+-|.||+|||.+.|.+ |++++|+||+|||+.||+.
T Consensus 233 --------------------------------------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~ 274 (419)
T KOG0663|consen 233 --------------------------------------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQ 274 (419)
T ss_pred --------------------------------------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhc
Confidence 234457899999999999976 9999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccC-------C--------------CCh----hh----hc--cChhhHHHHHHccCCCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHR-------V--------------LPP----QL----LL--KFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-------~--------------~~~----~~----~~--~~~~~~~li~~~L~~dP~~Rps 315 (886)
|.+.+.........+... + ++. .+ .. .+....+|+..+|.+||.+|.|
T Consensus 275 kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t 354 (419)
T KOG0663|consen 275 KPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT 354 (419)
T ss_pred CCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc
Confidence 877776555444333210 0 000 01 11 1234569999999999999999
Q ss_pred HHHHhcCCCCCCCcCch
Q 002736 316 MGELLQSEFLNEPRDSM 332 (886)
Q Consensus 316 ~~eil~h~~~~~~~~~~ 332 (886)
|.|+|+|+||.+.+.+.
T Consensus 355 A~~~L~h~~F~e~P~p~ 371 (419)
T KOG0663|consen 355 AEDGLKHEYFRETPLPI 371 (419)
T ss_pred HHHhhcccccccCCCCC
Confidence 99999999999866543
No 43
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.3e-32 Score=276.66 Aligned_cols=265 Identities=21% Similarity=0.387 Sum_probs=234.5
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecC
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~ 616 (886)
+.+..|+.+++||+.+++..+.| .+|.+.|.+|+|+..|.++|+++.|-.+++||+++. ..+.....+|
T Consensus 124 ~~as~d~tikv~D~~tg~~e~~L-----rGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~------~~c~ks~~gh 192 (406)
T KOG0295|consen 124 VSASEDATIKVFDTETGELERSL-----RGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF------FRCIKSLIGH 192 (406)
T ss_pred EEecCCceEEEEEccchhhhhhh-----hccccceeEEEEecCccEEEecCCccchhheeHHHH------HHHHHHhcCc
Confidence 45556999999999999986666 689999999999999999999999999999999762 1222344578
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhh
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~ 696 (886)
...|++++|-| .+++|+|++.|.+|+.|++.++-++.+|.+|...|..++.+. |+.++|+|+.|.+|++|-+.+.
T Consensus 193 ~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~--- 267 (406)
T KOG0295|consen 193 EHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATK--- 267 (406)
T ss_pred ccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecC-CeeEEEecCCCceEEEEEeccc---
Confidence 88999999999 589999999999999999999999999999999999999995 9999999999999999999984
Q ss_pred hccCceeeeee-cCCCeEEEEEeCC--------------CCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEe
Q 002736 697 LHLGVSIGTIK-TKANVCCVQFPLD--------------SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKF 761 (886)
Q Consensus 697 ~~~~~~~~~~~-~~~~v~~v~~sp~--------------~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f 761 (886)
.+...+. +...|-|++|-|. ++.++++|+.|++|++||+.++.. +.++.+|...|..++|
T Consensus 268 ----~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~c-L~tL~ghdnwVr~~af 342 (406)
T KOG0295|consen 268 ----QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMC-LFTLVGHDNWVRGVAF 342 (406)
T ss_pred ----hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeE-EEEEecccceeeeeEE
Confidence 3333333 3456888888663 236899999999999999999985 9999999999999999
Q ss_pred c-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEe
Q 002736 762 V-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 828 (886)
Q Consensus 762 ~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd 828 (886)
+ .|++|+|+..|++|++||+++. +++.++..|..-|++++|+.+-.|++|||-|.++++|.
T Consensus 343 ~p~Gkyi~ScaDDktlrvwdl~~~------~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 343 SPGGKYILSCADDKTLRVWDLKNL------QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred cCCCeEEEEEecCCcEEEEEeccc------eeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 7 8999999999999999999998 45889999999999999999999999999999999996
No 44
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=2.4e-32 Score=302.30 Aligned_cols=239 Identities=24% Similarity=0.389 Sum_probs=213.2
Q ss_pred CCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCc-------------------------------eEEEEecccCCcEE
Q 002736 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-------------------------------QVLTEMREHERRVW 664 (886)
Q Consensus 616 ~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~-------------------------------~~~~~~~~h~~~v~ 664 (886)
....++|..|++ +..+||.|-.|..|++|.+... ...+++.+|.++|.
T Consensus 377 t~~~v~ca~fSd-dssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy 455 (707)
T KOG0263|consen 377 TYQGVTCAEFSD-DSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY 455 (707)
T ss_pred cCCcceeEeecC-CcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence 345688889987 6779999999999999987621 12344779999999
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC
Q 002736 665 SIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK 743 (886)
Q Consensus 665 ~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~ 743 (886)
++.|+| +.++|++||.|++|+||.+.+ ..++-... |..+|++|+|+|. |.+||+||.|++.++|......
T Consensus 456 g~sFsP-d~rfLlScSED~svRLWsl~t-------~s~~V~y~GH~~PVwdV~F~P~-GyYFatas~D~tArLWs~d~~~ 526 (707)
T KOG0263|consen 456 GCSFSP-DRRFLLSCSEDSSVRLWSLDT-------WSCLVIYKGHLAPVWDVQFAPR-GYYFATASHDQTARLWSTDHNK 526 (707)
T ss_pred eeeecc-cccceeeccCCcceeeeeccc-------ceeEEEecCCCcceeeEEecCC-ceEEEecCCCceeeeeecccCC
Confidence 999999 999999999999999999998 45444444 4578999999999 9999999999999999998866
Q ss_pred cceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCC
Q 002736 744 IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETN 822 (886)
Q Consensus 744 ~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg 822 (886)
|++.+.+|-..|.|++|+ +..+++|||.|.+||+||+.++.. ++.|.||+++|.+|+|||+|+|||+|++||
T Consensus 527 -PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~------VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~ 599 (707)
T KOG0263|consen 527 -PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS------VRIFTGHKGPVTALAFSPCGRYLASGDEDG 599 (707)
T ss_pred -chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE------EEEecCCCCceEEEEEcCCCceEeecccCC
Confidence 799999999999999997 999999999999999999999854 999999999999999999999999999999
Q ss_pred cEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 823 EVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 823 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
.|.|||+.++.++..+ .+|.+.|.++.|+.+|. +||+|+.|.+|++||+
T Consensus 600 ~I~iWDl~~~~~v~~l-------------~~Ht~ti~SlsFS~dg~-vLasgg~DnsV~lWD~ 648 (707)
T KOG0263|consen 600 LIKIWDLANGSLVKQL-------------KGHTGTIYSLSFSRDGN-VLASGGADNSVRLWDL 648 (707)
T ss_pred cEEEEEcCCCcchhhh-------------hcccCceeEEEEecCCC-EEEecCCCCeEEEEEc
Confidence 9999999999888654 34567899999999999 9999999999999996
No 45
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-34 Score=306.75 Aligned_cols=205 Identities=19% Similarity=0.262 Sum_probs=167.8
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
+.+++....|+|+|.++..+-. .+.++++||| +||+|-+.+.+. .+++.++..|+++++.||.|||.+|||||
T Consensus 320 Ei~Vm~~~~H~NiVnfl~Sylv----~deLWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHr 393 (550)
T KOG0578|consen 320 EILVMRDLHHPNIVNFLDSYLV----GDELWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHR 393 (550)
T ss_pred HHHHHHhccchHHHHHHHHhcc----cceeEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeee
Confidence 4455666788888887773322 3778899999 999999988553 48999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
|||.+|||+..+|.+||+|||+|..+.....
T Consensus 394 DIKSDnILL~~~g~vKltDFGFcaqi~~~~~------------------------------------------------- 424 (550)
T KOG0578|consen 394 DIKSDNILLTMDGSVKLTDFGFCAQISEEQS------------------------------------------------- 424 (550)
T ss_pred ccccceeEeccCCcEEEeeeeeeeccccccC-------------------------------------------------
Confidence 9999999999999999999999965532210
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
...+.+|||+|||||++....|++++||||||+++.||+
T Consensus 425 -----------------------------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMv 463 (550)
T KOG0578|consen 425 -----------------------------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMV 463 (550)
T ss_pred -----------------------------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHh
Confidence 223359999999999999999999999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCC--hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
- ||.. +....++..+...-.| ..+...++.+.+|+.+||+.||.+|++|.|+|+||||+...
T Consensus 464 eGEPPYln-E~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 464 EGEPPYLN-ENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred cCCCCccC-CChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 9 6655 4455555555444333 23455788999999999999999999999999999996543
No 46
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.3e-33 Score=276.91 Aligned_cols=209 Identities=16% Similarity=0.205 Sum_probs=170.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.|-...|+|++++.. + ....+.+.++.||...+|...|+.....++..+++.|+.+++.||+|||++.|+||||||
T Consensus 54 ~Lqel~h~nIi~LiD-~---F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKP 129 (318)
T KOG0659|consen 54 LLQELKHPNIIELID-V---FPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKP 129 (318)
T ss_pred HHHHccCcchhhhhh-h---ccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCc
Confidence 334456888887766 2 235677899999999999999988888999999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
.|+||+++|.+|++|||+++.++....
T Consensus 130 nNLLis~~g~lKiADFGLAr~f~~p~~----------------------------------------------------- 156 (318)
T KOG0659|consen 130 NNLLISSDGQLKIADFGLARFFGSPNR----------------------------------------------------- 156 (318)
T ss_pred cceEEcCCCcEEeecccchhccCCCCc-----------------------------------------------------
Confidence 999999999999999999988765421
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~-- 267 (886)
..+..+-|.||+|||.+.|.. |+..+||||.|||+.||+-
T Consensus 157 -------------------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~ 199 (318)
T KOG0659|consen 157 -------------------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRV 199 (318)
T ss_pred -------------------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccC
Confidence 111126699999999999965 9999999999999999998
Q ss_pred CCCCCchhhHHhHhhccC----------------------CCCh-----hhhccChhhHHHHHHccCCCCCCCCCHHHHh
Q 002736 268 PFSTGEEKTRTMSSLRHR----------------------VLPP-----QLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~----------------------~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 320 (886)
||+.++.....+..+... .+|. .+...+.++.+|+.+||.+||.+|+++.|+|
T Consensus 200 P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 200 PFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQAL 279 (318)
T ss_pred CCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHh
Confidence 999888777666544321 1111 1223445667999999999999999999999
Q ss_pred cCCCCCCCcCchH
Q 002736 321 QSEFLNEPRDSME 333 (886)
Q Consensus 321 ~h~~~~~~~~~~~ 333 (886)
+|+||...+.+..
T Consensus 280 ~~~yf~~~P~pt~ 292 (318)
T KOG0659|consen 280 KHPYFKSLPLPTP 292 (318)
T ss_pred cchhhhcCCCCCC
Confidence 9999997655443
No 47
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-31 Score=260.69 Aligned_cols=241 Identities=25% Similarity=0.372 Sum_probs=209.1
Q ss_pred EEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECC-----CceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEE
Q 002736 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-----RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (886)
Q Consensus 612 ~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~-----t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~ 686 (886)
...+|.+.|..++..+...+++++++.|.++.+|++. .|.+++.+.+|...|..+..++ ++++.++++.|++++
T Consensus 10 tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD~~lr 88 (315)
T KOG0279|consen 10 TLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWDGTLR 88 (315)
T ss_pred eecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEcc-CCceEEeccccceEE
Confidence 3457999999999999889999999999999999875 3567899999999999999998 999999999999999
Q ss_pred EEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEec--CCCCeEEEEec-
Q 002736 687 LWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--HNKTVSYVKFV- 762 (886)
Q Consensus 687 lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~--h~~~V~~v~f~- 762 (886)
+||+.+ +.....+. |...|.+|+|+|+ ...+++||.|.+|.+|++-... ..++.. |+..|++|+|+
T Consensus 89 lWDl~~-------g~~t~~f~GH~~dVlsva~s~d-n~qivSGSrDkTiklwnt~g~c--k~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 89 LWDLAT-------GESTRRFVGHTKDVLSVAFSTD-NRQIVSGSRDKTIKLWNTLGVC--KYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred EEEecC-------CcEEEEEEecCCceEEEEecCC-CceeecCCCcceeeeeeecccE--EEEEecCCCcCcEEEEEEcC
Confidence 999999 66555555 4567999999999 7889999999999999987654 444443 38899999997
Q ss_pred --CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeecc
Q 002736 763 --DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNF 840 (886)
Q Consensus 763 --~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~ 840 (886)
+..+|+++|.|++|++||+++. +...++.||++.++.|.+||||..+|+|+.||++.+||++.++.+.++.
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~------~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~- 231 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNC------QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE- 231 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCc------chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-
Confidence 3679999999999999999987 4578899999999999999999999999999999999999998876553
Q ss_pred CCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 841 NHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 841 ~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
+...|.++||+|+-. .|+++-.. .|+||++
T Consensus 232 -------------a~~~v~sl~fspnry-wL~~at~~-sIkIwdl 261 (315)
T KOG0279|consen 232 -------------AFDIVNSLCFSPNRY-WLCAATAT-SIKIWDL 261 (315)
T ss_pred -------------CCCeEeeEEecCCce-eEeeccCC-ceEEEec
Confidence 456799999999987 55555444 5999996
No 48
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.4e-31 Score=292.69 Aligned_cols=314 Identities=22% Similarity=0.266 Sum_probs=248.4
Q ss_pred ccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCC--CEEEEEeCCCcEEEEEcCcccCcccccccceEE
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG--ELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~--~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~ 613 (886)
..+|..||.++|||+..+-+...+ .+|.+.|+++.|+|+- .+|++|+.|+.+++||+.+... .....
T Consensus 120 lAtggaD~~v~VWdi~~~~~th~f-----kG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t------cl~~~ 188 (775)
T KOG0319|consen 120 LATGGADGRVKVWDIKNGYCTHSF-----KGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT------CLHTM 188 (775)
T ss_pred EEeccccceEEEEEeeCCEEEEEe-----cCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch------HHHHH
Confidence 467889999999999999988777 6899999999999965 4689999999999999985211 12223
Q ss_pred ecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECC---------------------------------------------
Q 002736 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS--------------------------------------------- 648 (886)
Q Consensus 614 ~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~--------------------------------------------- 648 (886)
..|.+.|++++|.+ ++..+++++.|..+.|||+.
T Consensus 189 ~~H~S~vtsL~~~~-d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~ 267 (775)
T KOG0319|consen 189 ILHKSAVTSLAFSE-DSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDS 267 (775)
T ss_pred Hhhhhheeeeeecc-CCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEec
Confidence 35778888888877 35555555556666666542
Q ss_pred -CceEEE-------------------------------------------------------------------------
Q 002736 649 -RSQVLT------------------------------------------------------------------------- 654 (886)
Q Consensus 649 -t~~~~~------------------------------------------------------------------------- 654 (886)
+++++.
T Consensus 268 es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~ 347 (775)
T KOG0319|consen 268 ESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPE 347 (775)
T ss_pred ccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCc
Confidence 211100
Q ss_pred ------------EecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeee-eecCCCeEEEEEeCCC
Q 002736 655 ------------EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGT-IKTKANVCCVQFPLDS 721 (886)
Q Consensus 655 ------------~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~~ 721 (886)
.+.+|+..|.+++... ++.+|+||+.|.++++|.++..... ..+++. ..|...|.+|+++..+
T Consensus 348 lr~y~~~~~~c~ii~GH~e~vlSL~~~~-~g~llat~sKD~svilWr~~~~~~~---~~~~a~~~gH~~svgava~~~~~ 423 (775)
T KOG0319|consen 348 LRLYTLPTSYCQIIPGHTEAVLSLDVWS-SGDLLATGSKDKSVILWRLNNNCSK---SLCVAQANGHTNSVGAVAGSKLG 423 (775)
T ss_pred eEEEecCCCceEEEeCchhheeeeeecc-cCcEEEEecCCceEEEEEecCCcch---hhhhhhhcccccccceeeecccC
Confidence 0356778888888442 6789999999999999988442110 112222 2356679999998887
Q ss_pred CcEEEEEeCCCeEEEEecCCCC----cceE----EEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSK----IPLC----TLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTP 792 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~----~~~~----~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~ 792 (886)
...|+++|.|.++++|++...+ .++. +...|.+.|++|+++ +..+++|||.|.+.+||++... ..
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~------~l 497 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL------RL 497 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCc------eE
Confidence 7899999999999999998722 1122 345899999999997 8889999999999999999965 56
Q ss_pred ceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEE
Q 002736 793 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV 872 (886)
Q Consensus 793 ~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~ 872 (886)
+.++.||+..|++|.|+|.++.+||+|.|.+|+||.+.+..++.+| ++|...|..+.|-.++. .|+
T Consensus 498 ~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~-------------eGH~~aVlra~F~~~~~-qli 563 (775)
T KOG0319|consen 498 LGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTF-------------EGHTSAVLRASFIRNGK-QLI 563 (775)
T ss_pred EEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeee-------------cCccceeEeeeeeeCCc-EEE
Confidence 8999999999999999999999999999999999999998887654 56778899999999999 999
Q ss_pred EEeCCCCEEEEEe
Q 002736 873 AANSSGNIKILEM 885 (886)
Q Consensus 873 s~~~dg~I~iw~l 885 (886)
+|++||.||+|++
T Consensus 564 S~~adGliKlWni 576 (775)
T KOG0319|consen 564 SAGADGLIKLWNI 576 (775)
T ss_pred eccCCCcEEEEec
Confidence 9999999999986
No 49
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-33 Score=289.14 Aligned_cols=268 Identities=17% Similarity=0.156 Sum_probs=187.8
Q ss_pred ccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhccc
Q 002736 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (886)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (886)
|-+.+.-.|+..+||=.+.+|. .....+.+|++||| .||+|..++++ +++.+++..++.|+..|+.||+|||-+
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa----~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml 198 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA----SFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML 198 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh----eeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence 5556667788899999999888 33345778999999 89999998854 467899999999999999999999999
Q ss_pred CeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhc-ccccccccccCCCCc
Q 002736 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR-LRREDLQLVTAPTND 180 (886)
Q Consensus 102 giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 180 (886)
|||.|||||+||||.++|||.+.||-++........ .. . +++.+......+.+ ....-|.+.......
T Consensus 199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt--~~-----~----s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~ 267 (459)
T KOG0610|consen 199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT--LV-----K----SSSPRSSGSQPSCRSRQPSCFSPRCLSSSK 267 (459)
T ss_pred ceeeccCCcceeEEecCCcEEeeeccccccCCCCCe--ee-----c----cCCCCCCCCCcccccccccccccchhcccc
Confidence 999999999999999999999999999865421100 00 0 00000000000000 001111111000000
Q ss_pred cccccccccCCccCcccccccCccccccccc---ccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDN---RVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
. +. | .|. +...+...+.. ..+....+||-.|.|||++.|..-+.++|+|+
T Consensus 268 ~--------------~~---------k-~~~~~~~~~p~~~aep~---~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWt 320 (459)
T KOG0610|consen 268 K--------------RK---------K-KDESASRSLPELVAEPT---GARSNSFVGTHEYLAPEVIRGEGHGSAVDWWT 320 (459)
T ss_pred c--------------cc---------c-ccccccccchhhhcCCC---CccccccccccccccceeeecCCCCchhhHHH
Confidence 0 00 0 000 00000000000 11233469999999999999999999999999
Q ss_pred HHHHHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC----HHHHhcCCCCCCCcC
Q 002736 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 330 (886)
Q Consensus 258 lGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h~~~~~~~~ 330 (886)
|||+|||||. ||.+...+......+.+....|.....+..+++||.++|.+||++|.. |.||.+||||++...
T Consensus 321 fGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW 400 (459)
T KOG0610|consen 321 FGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW 400 (459)
T ss_pred HHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence 9999999998 998888877777777766655555567788999999999999999988 999999999999876
Q ss_pred chH
Q 002736 331 SME 333 (886)
Q Consensus 331 ~~~ 333 (886)
.+.
T Consensus 401 aLi 403 (459)
T KOG0610|consen 401 ALI 403 (459)
T ss_pred hhe
Confidence 543
No 50
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.6e-31 Score=253.90 Aligned_cols=278 Identities=23% Similarity=0.345 Sum_probs=232.7
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+..|+++|..+.|+.||+|.+|+|.|++||+|+..... .....-+|...|..++.+. +...+++|+.|..|.
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~-------liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~ 84 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA-------LIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQ 84 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeecccccc-------eeeeecCCCceeeeccccc-cccccccCCCCceEE
Confidence 35689999999999999999999999999999976431 1222345788899988876 688999999999999
Q ss_pred EEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCCC
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDSG 722 (886)
Q Consensus 644 iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~ 722 (886)
+||+.||+..+.+.+|.+.|+.+.|+. +...+++|+-|.++++||.++.. ..+++.+.. ...|.+|..+ +
T Consensus 85 vwDV~TGkv~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s-----~ePiQildea~D~V~Si~v~---~ 155 (307)
T KOG0316|consen 85 VWDVNTGKVDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRS-----FEPIQILDEAKDGVSSIDVA---E 155 (307)
T ss_pred EEEcccCeeeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCC-----CCccchhhhhcCceeEEEec---c
Confidence 999999999999999999999999996 88999999999999999999854 556666654 6779999987 5
Q ss_pred cEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCC
Q 002736 723 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 801 (886)
Q Consensus 723 ~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~ 801 (886)
+.|++||.||+++.||+|.+.. ..-..+ .+|++++|+ +++..+.++.|++|++-|-.++ +.+.+++||.+
T Consensus 156 heIvaGS~DGtvRtydiR~G~l-~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tG------klL~sYkGhkn 226 (307)
T KOG0316|consen 156 HEIVAGSVDGTVRTYDIRKGTL-SSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETG------KLLKSYKGHKN 226 (307)
T ss_pred cEEEeeccCCcEEEEEeeccee-ehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchh------HHHHHhccccc
Confidence 6899999999999999998874 333334 579999998 9999999999999999999988 56999999988
Q ss_pred c--eeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCC
Q 002736 802 V--KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGN 879 (886)
Q Consensus 802 ~--v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~ 879 (886)
. ...++++.....+++||+||.|++||+-....+..+..... -.|.+++++|... -|++|...+.
T Consensus 227 ~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~------------v~v~dl~~hp~~~-~f~~A~~~~~ 293 (307)
T KOG0316|consen 227 MEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVST------------VIVTDLSCHPTMD-DFITATGHGD 293 (307)
T ss_pred ceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCc------------eeEEeeecccCcc-ceeEecCCce
Confidence 5 44556777788999999999999999998887765543221 1289999999998 7777766654
Q ss_pred E
Q 002736 880 I 880 (886)
Q Consensus 880 I 880 (886)
+
T Consensus 294 ~ 294 (307)
T KOG0316|consen 294 L 294 (307)
T ss_pred e
Confidence 3
No 51
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=5.5e-31 Score=266.87 Aligned_cols=304 Identities=16% Similarity=0.249 Sum_probs=259.4
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecC
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~ 616 (886)
++|..|.+..+|+.++++...++ .+|+..|+++.|+.||.+||||+.+|.|+||+..+... .. .....
T Consensus 80 aTGGgDD~AflW~~~~ge~~~el-----tgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~-----~~--~~~~e 147 (399)
T KOG0296|consen 80 ATGGGDDLAFLWDISTGEFAGEL-----TGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGE-----QW--KLDQE 147 (399)
T ss_pred EecCCCceEEEEEccCCcceeEe-----cCCCCceEEEEEccCceEEEecCCCccEEEEEcccCce-----EE--Eeecc
Confidence 66788999999999999976665 78999999999999999999999999999999876311 11 11134
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhh
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~ 696 (886)
-..|.-+.|+| ...+|+.|+.||.|.+|.+..+...+.+.+|..++++=.|.| +|..+++|.+||+|++||..+
T Consensus 148 ~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p-dGKr~~tgy~dgti~~Wn~kt---- 221 (399)
T KOG0296|consen 148 VEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP-DGKRILTGYDDGTIIVWNPKT---- 221 (399)
T ss_pred cCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC-CCceEEEEecCceEEEEecCC----
Confidence 56788899999 799999999999999999999888889999999999999999 899999999999999999999
Q ss_pred hccCceeeeeec--CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEe--------cCCCCeEEEEec----
Q 002736 697 LHLGVSIGTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI--------GHNKTVSYVKFV---- 762 (886)
Q Consensus 697 ~~~~~~~~~~~~--~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~--------~h~~~V~~v~f~---- 762 (886)
+.++..+.. .....|+.++.. +..++.|+.++.+++....+++. +.... .|...+.+|.|.
T Consensus 222 ---g~p~~~~~~~e~~~~~~~~~~~~-~~~~~~g~~e~~~~~~~~~sgKV-v~~~n~~~~~l~~~~e~~~esve~~~~ss 296 (399)
T KOG0296|consen 222 ---GQPLHKITQAEGLELPCISLNLA-GSTLTKGNSEGVACGVNNGSGKV-VNCNNGTVPELKPSQEELDESVESIPSSS 296 (399)
T ss_pred ---CceeEEecccccCcCCccccccc-cceeEeccCCccEEEEccccceE-EEecCCCCccccccchhhhhhhhhccccc
Confidence 777766653 345789999988 88999999999999988877764 33333 455666677663
Q ss_pred CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCC
Q 002736 763 DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 842 (886)
Q Consensus 763 ~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~ 842 (886)
.-.+.|+|+-||+|.|||+.... ++....|...|..+.|-+ ..+|++++.||.|+.||.+++..+..+
T Consensus 297 ~lpL~A~G~vdG~i~iyD~a~~~-------~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y---- 364 (399)
T KOG0296|consen 297 KLPLAACGSVDGTIAIYDLAAST-------LRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTY---- 364 (399)
T ss_pred ccchhhcccccceEEEEecccch-------hheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEE----
Confidence 45678899999999999998864 566777999999999998 789999999999999999999877554
Q ss_pred CCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 843 ADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 843 ~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
.+|...|.+++.+|+.+ .++|++.|++.+||++
T Consensus 365 ---------~GH~~~Il~f~ls~~~~-~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 365 ---------TGHQMGILDFALSPQKR-LVVTVSDDNTALVFEV 397 (399)
T ss_pred ---------ecCchheeEEEEcCCCc-EEEEecCCCeEEEEec
Confidence 46778899999999999 9999999999999975
No 52
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=2.4e-31 Score=270.50 Aligned_cols=270 Identities=23% Similarity=0.405 Sum_probs=231.6
Q ss_pred ccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCC---EEEEEeCCCcEEEEEcCcccCcccccccc
Q 002736 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE---LFAAAGVNKKIKVFECDAIINENRDIHYP 610 (886)
Q Consensus 534 ~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~---~lat~~~d~~Ikiwd~~~~~~~~~~~~~~ 610 (886)
...++|.+||.+++|+.+ |++...+ .+|.++|.+++|.-..+ .|++||.|.+|++|.++..........
T Consensus 116 ~~IltgsYDg~~riWd~~-Gk~~~~~-----~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~-- 187 (423)
T KOG0313|consen 116 KWILTGSYDGTSRIWDLK-GKSIKTI-----VGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALK-- 187 (423)
T ss_pred ceEEEeecCCeeEEEecC-CceEEEE-----ecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHh--
Confidence 345889999999999954 6766555 68999999988875433 599999999999999876433222111
Q ss_pred eEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCC-------------------------ceEEEEecccCCcEEE
Q 002736 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-------------------------SQVLTEMREHERRVWS 665 (886)
Q Consensus 611 ~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t-------------------------~~~~~~~~~h~~~v~~ 665 (886)
...+|...|-+|+.++ ++..++||++|.+++||+..+ +.++..+.+|..+|.+
T Consensus 188 -~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~ 265 (423)
T KOG0313|consen 188 -VCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSS 265 (423)
T ss_pred -HhcccccceeEEEecC-CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceee
Confidence 2238999999999998 799999999999999999321 2345667899999999
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC--
Q 002736 666 IDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-- 743 (886)
Q Consensus 666 v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~-- 743 (886)
|.|++ ...+.+++.|.+|+.||+.+ +..+.++..+..++|+.++|. .++|++|+.|..+++||.|++.
T Consensus 266 V~w~d--~~v~yS~SwDHTIk~WDlet-------g~~~~~~~~~ksl~~i~~~~~-~~Ll~~gssdr~irl~DPR~~~gs 335 (423)
T KOG0313|consen 266 VVWSD--ATVIYSVSWDHTIKVWDLET-------GGLKSTLTTNKSLNCISYSPL-SKLLASGSSDRHIRLWDPRTGDGS 335 (423)
T ss_pred EEEcC--CCceEeecccceEEEEEeec-------ccceeeeecCcceeEeecccc-cceeeecCCCCceeecCCCCCCCc
Confidence 99994 88999999999999999999 888888888999999999998 8999999999999999999864
Q ss_pred cceEEEecCCCCeEEEEec--CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCC
Q 002736 744 IPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSET 821 (886)
Q Consensus 744 ~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~D 821 (886)
.+..++.+|...|.+|+|+ +...|+||+.|+++++||+++.. .|+..+.+|...|.++.|+ .+.+|++||.|
T Consensus 336 ~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k-----~plydI~~h~DKvl~vdW~-~~~~IvSGGaD 409 (423)
T KOG0313|consen 336 VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK-----APLYDIAGHNDKVLSVDWN-EGGLIVSGGAD 409 (423)
T ss_pred eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC-----CcceeeccCCceEEEEecc-CCceEEeccCc
Confidence 4567899999999999997 77899999999999999999985 4899999999999999997 46799999999
Q ss_pred CcEEEEec
Q 002736 822 NEVFVYHK 829 (886)
Q Consensus 822 g~v~iwd~ 829 (886)
++|+|+.-
T Consensus 410 ~~l~i~~~ 417 (423)
T KOG0313|consen 410 NKLRIFKG 417 (423)
T ss_pred ceEEEecc
Confidence 99999964
No 53
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.2e-32 Score=275.82 Aligned_cols=282 Identities=18% Similarity=0.330 Sum_probs=234.9
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd 646 (886)
....|+|+.++ .+.+++|..|++|+|||..+. ......++|.+.|.|+.|. ...|+||+.|.+|+|||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~-------~c~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSL-------ECLKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccH-------HHHHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEe
Confidence 36689999886 458999999999999998763 2233456899999999986 45999999999999999
Q ss_pred CCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEE
Q 002736 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLA 726 (886)
Q Consensus 647 ~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~ 726 (886)
+++++++.++-+|...|..+.|+ ..++++||.|.++.+||+..+....-.. -...|.+.|+.|+|+ .++++
T Consensus 264 v~tge~l~tlihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rr---VLvGHrAaVNvVdfd---~kyIV 334 (499)
T KOG0281|consen 264 VNTGEPLNTLIHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRR---VLVGHRAAVNVVDFD---DKYIV 334 (499)
T ss_pred ccCCchhhHHhhhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHH---HHhhhhhheeeeccc---cceEE
Confidence 99999999999999999999997 4699999999999999998754221100 012356889999997 56999
Q ss_pred EEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEE
Q 002736 727 FGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV 806 (886)
Q Consensus 727 ~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v 806 (886)
++|.|.+|++|++.+... +.++.+|...|.|+.| .+.+++|||.|.+|++||+..+ .+++.+.||..-|.++
T Consensus 335 sASgDRTikvW~~st~ef-vRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~~G------~cLRvLeGHEeLvRci 406 (499)
T KOG0281|consen 335 SASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEELVRCI 406 (499)
T ss_pred EecCCceEEEEeccceee-ehhhhcccccceehhc-cCeEEEecCCCceEEEEecccc------HHHHHHhchHHhhhhe
Confidence 999999999999999885 9999999999999887 5889999999999999999998 4599999999999999
Q ss_pred EEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEeC
Q 002736 807 GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 886 (886)
Q Consensus 807 ~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l~ 886 (886)
.| +.+.|++|++||+|+|||+..+...... ...+.-.....|.+.|..+.|. .. .+++++.|.+|-||+++
T Consensus 407 RF--d~krIVSGaYDGkikvWdl~aaldpra~----~~~~Cl~~lv~hsgRVFrLQFD--~f-qIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 407 RF--DNKRIVSGAYDGKIKVWDLQAALDPRAP----ASTLCLRTLVEHSGRVFRLQFD--EF-QIISSSHDDTILIWDFL 477 (499)
T ss_pred ee--cCceeeeccccceEEEEecccccCCccc----ccchHHHhhhhccceeEEEeec--ce-EEEeccCCCeEEEEEcC
Confidence 99 5789999999999999999876433211 1112223346788899999996 34 79999999999999974
No 54
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=8.2e-31 Score=299.22 Aligned_cols=285 Identities=26% Similarity=0.414 Sum_probs=244.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEE
Q 002736 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (886)
Q Consensus 566 ~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iW 645 (886)
.|...|+++.|+++|+.+++++.++.|++|+...... . ......+|...|++++|+| ++.++++++.|++|+||
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--~---~~~~l~~h~~~v~~~~fs~-d~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--N---LLRELSGHTRGVSDVAFSP-DGSYLLSGSDDKTLRIW 230 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--h---hhccccccccceeeeEECC-CCcEEEEecCCceEEEe
Confidence 3588999999999999999999999999999854321 0 1111257999999999999 78899999999999999
Q ss_pred EC-CCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCCCc
Q 002736 646 DV-SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDSGR 723 (886)
Q Consensus 646 d~-~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~ 723 (886)
|+ ..+..++.+++|...|++++|+| .++++++|+.|++|+|||+++ +.++..+.. ...|.+++|+++ ++
T Consensus 231 d~~~~~~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~-------~~~~~~l~~hs~~is~~~f~~d-~~ 301 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRT-------GECVRKLKGHSDGISGLAFSPD-GN 301 (456)
T ss_pred eccCCCeEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccC-------CeEEEeeeccCCceEEEEECCC-CC
Confidence 99 55588999999999999999999 679999999999999999999 777777775 457999999999 89
Q ss_pred EEEEEeCCCeEEEEecCCCCc-ceEEEecCCCC--eEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 724 SLAFGSADHRIYYYDLRNSKI-PLCTLIGHNKT--VSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 724 ~l~~gs~Dg~I~vwDlr~~~~-~~~~~~~h~~~--V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
+|++++.|+.|++||+.++.. ++..+.++... +++++|+ ++.+|++++.|+++++||++... .+..+.+|
T Consensus 302 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~------~~~~~~~~ 375 (456)
T KOG0266|consen 302 LLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGK------SVGTYTGH 375 (456)
T ss_pred EEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCc------ceeeeccc
Confidence 999999999999999999874 25667777666 9999997 99999999999999999999874 47888999
Q ss_pred CCce---eEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccC-CCcEEEEEEccCCCcEEEEEe
Q 002736 800 TNVK---NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDA-AQFISSVCWRGQSSNTLVAAN 875 (886)
Q Consensus 800 ~~~v---~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V~~v~~s~~~~~~l~s~~ 875 (886)
.+.+ .+...++.+.++.+|+.|+.|++|+..++..+..+ .+| ...|..+.|+|..+ ++++++
T Consensus 376 ~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l-------------~~h~~~~~~~~~~~~~~~-~~~s~s 441 (456)
T KOG0266|consen 376 SNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL-------------EGHSKAAVSDLSSHPTEN-LIASSS 441 (456)
T ss_pred CCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhh-------------cCCCCCceeccccCCCcC-eeeecC
Confidence 8853 34455778999999999999999999987666443 334 56799999999999 899888
Q ss_pred --CCCCEEEEEe
Q 002736 876 --SSGNIKILEM 885 (886)
Q Consensus 876 --~dg~I~iw~l 885 (886)
.|+.|++|..
T Consensus 442 ~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 442 FEGDGLIRLWKY 453 (456)
T ss_pred cCCCceEEEecC
Confidence 7999999963
No 55
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=4.4e-32 Score=283.98 Aligned_cols=290 Identities=16% Similarity=0.239 Sum_probs=239.5
Q ss_pred cccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCc
Q 002736 563 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 563 ~~~~h~~~V~sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~ 641 (886)
.+.+|...|+++.|.| .+.+|+++|.|++|+||++.. +....-..++|..+|.+++|++ .+..++|+++|+.
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~------~~~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD~~ 281 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD------DRRCLRTFKGHRKPVRDASFNN-CGTSFLSASFDRF 281 (503)
T ss_pred eccCCccccchhhhccceeeEEEecCCCceEEEEEEec------Ccceehhhhcchhhhhhhhccc-cCCeeeeeeccee
Confidence 4578999999999999 899999999999999999875 2233334568999999999998 7999999999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCC
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLD 720 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~ 720 (886)
|++||++||+++..|. -...++|+.|+|.+.+.+++|+.|+.|+.||++++. .++.+. +-+.|..+.|-++
T Consensus 282 lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k-------vvqeYd~hLg~i~~i~F~~~ 353 (503)
T KOG0282|consen 282 LKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK-------VVQEYDRHLGAILDITFVDE 353 (503)
T ss_pred eeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH-------HHHHHHhhhhheeeeEEccC
Confidence 9999999999998885 356789999999777999999999999999999954 344443 3457999999999
Q ss_pred CCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 721 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 721 ~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
+..+++.+.|+++++|+.+.+-........+.-...+|..+ ++.+++.=+.|+.|.++.+...-. ......|.||
T Consensus 354 -g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r---~nkkK~feGh 429 (503)
T KOG0282|consen 354 -GRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR---LNKKKRFEGH 429 (503)
T ss_pred -CceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccc---cCHhhhhcce
Confidence 89999999999999999987753222222233345566665 899999999999999999764321 1335678899
Q ss_pred CCc--eeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCC
Q 002736 800 TNV--KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSS 877 (886)
Q Consensus 800 ~~~--v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~d 877 (886)
... -..|.|||||.+|++|+.||.+.+||..+.+.+..+ ..|++.|..+.|+|..+..|||++.|
T Consensus 430 ~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l-------------kah~~~ci~v~wHP~e~Skvat~~w~ 496 (503)
T KOG0282|consen 430 SVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL-------------KAHDQPCIGVDWHPVEPSKVATCGWD 496 (503)
T ss_pred eccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcc-------------ccCCcceEEEEecCCCcceeEecccC
Confidence 754 456799999999999999999999999987766433 45678899999999987789999999
Q ss_pred CCEEEEE
Q 002736 878 GNIKILE 884 (886)
Q Consensus 878 g~I~iw~ 884 (886)
|.|++|+
T Consensus 497 G~Ikiwd 503 (503)
T KOG0282|consen 497 GLIKIWD 503 (503)
T ss_pred ceeEecC
Confidence 9999996
No 56
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.7e-33 Score=286.98 Aligned_cols=219 Identities=21% Similarity=0.294 Sum_probs=167.4
Q ss_pred CcccccccCceeecccccccCCCCCCccccccc---cCCceEEEEeeCCcchhhhhcCCC---CCcChHHHHHHHHHHHH
Q 002736 20 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPK---RSVDVYECLHIFRQIVE 93 (886)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~~g~sL~~~l~~~~---~~l~~~~~~~i~~qi~~ 93 (886)
....|+..-...+.|.+| ++.+++ ++..+. ....+++++||...+|..+|+... ..++...++.+++||+.
T Consensus 55 ~taiREisllk~L~~~~~--iv~L~d-v~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~ 131 (323)
T KOG0594|consen 55 STAIREISLLKRLSHANH--IVRLHD-VIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLR 131 (323)
T ss_pred chhhHHHHHHHHhCCCcc--eEEEEe-eeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHH
Confidence 344566666667777776 666666 554332 234789999999999999997654 35788999999999999
Q ss_pred HHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccccccccc
Q 002736 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (886)
Q Consensus 94 ~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 173 (886)
||+|||++||+||||||+||||+++|.+|++|||+|+.++-+.-
T Consensus 132 gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~------------------------------------ 175 (323)
T KOG0594|consen 132 GLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR------------------------------------ 175 (323)
T ss_pred HHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc------------------------------------
Confidence 99999999999999999999999999999999999964432210
Q ss_pred ccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcc
Q 002736 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCA 252 (886)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~ 252 (886)
..+..++|.||+|||++.|. .|++.
T Consensus 176 ------------------------------------------------------~yt~evvTlWYRaPEvLlGs~~Ys~~ 201 (323)
T KOG0594|consen 176 ------------------------------------------------------TYTPEVVTLWYRAPEVLLGSTSYSTS 201 (323)
T ss_pred ------------------------------------------------------cccccEEEeeccCHHHhcCCCcCCCC
Confidence 12334889999999999997 59999
Q ss_pred cccchHHHHHHHHhc--CCCCCchhhHHhHhhcc---C-----------------CC-----C----hhhhccChhhHHH
Q 002736 253 SDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH---R-----------------VL-----P----PQLLLKFPKEASF 301 (886)
Q Consensus 253 sDIwSlGvil~eLl~--pf~~~~~~~~~~~~~~~---~-----------------~~-----~----~~~~~~~~~~~~l 301 (886)
.||||+|||++||++ |.+.+.........+.. . .+ + .......+...++
T Consensus 202 vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dl 281 (323)
T KOG0594|consen 202 VDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIEL 281 (323)
T ss_pred cchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHH
Confidence 999999999999999 66666544444332211 0 00 0 0111122467799
Q ss_pred HHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 302 CLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 302 i~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
+.+||.++|.+|.|+..+|.||||......
T Consensus 282 l~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 282 LSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred HHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 999999999999999999999999987544
No 57
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=3.1e-31 Score=256.35 Aligned_cols=267 Identities=22% Similarity=0.420 Sum_probs=226.7
Q ss_pred ccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCcccCcccccccceE-EecCCCC
Q 002736 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSK 619 (886)
Q Consensus 542 d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d-~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~-~~~~~~~ 619 (886)
.|.+.+-+....+-+.++.. ..-.+.+..++|+++ ...+++++.||.++|||+... ..|+. .-.|...
T Consensus 37 ~G~L~ile~~~~~gi~e~~s---~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~-------s~Pi~~~kEH~~E 106 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQS---YDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMP-------SKPIHKFKEHKRE 106 (311)
T ss_pred CceEEEEecCCCCCeEEEEe---eecccceeEeeecCCCcceEEEEecCceEEEeccCCC-------CcchhHHHhhhhh
Confidence 67777777754443444432 234778999999995 468889999999999996532 12332 2358899
Q ss_pred eeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhcc
Q 002736 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (886)
Q Consensus 620 I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~ 699 (886)
|.++.|++.....++++|+||+|++|+....+.++++++|...|....|+|..+++++++|.||+++|||++.+
T Consensus 107 V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~------ 180 (311)
T KOG0277|consen 107 VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP------ 180 (311)
T ss_pred eEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC------
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEEEECCCcEE
Q 002736 700 GVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLK 777 (886)
Q Consensus 700 ~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~Dg~i~ 777 (886)
++.+....|...+.|+.|+..+.+.+++|+.|+.|++||+|+.+.|+..+.+|.-+|..|+|+ ....|+|+|.|-+++
T Consensus 181 gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~r 260 (311)
T KOG0277|consen 181 GKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVR 260 (311)
T ss_pred CceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEE
Confidence 444443334558999999998889999999999999999999999999999999999999997 667999999999999
Q ss_pred EEeCCCCCccccCCCceEeecCCCceeEEEEecC-CCEEEEEcCCCcEEEEec
Q 002736 778 LWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW-DGYVATGSETNEVFVYHK 829 (886)
Q Consensus 778 lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~lasgs~Dg~v~iwd~ 829 (886)
|||..... ..+.+..-|+.-+..+.||+. ..++|+++.|+.++||+-
T Consensus 261 iw~~~~~d-----s~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 261 IWDPERQD-----SAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ecccccch-----hhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99998664 456777789989999999986 559999999999999973
No 58
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=5.5e-33 Score=288.83 Aligned_cols=208 Identities=15% Similarity=0.213 Sum_probs=166.4
Q ss_pred ccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
+.+...+...+|+|+|+++. +++ ..+.+|+|||| .||+|.+||.+. +.+++..+++++.||+.||.+||+++||
T Consensus 57 ~~Ei~iLkel~H~nIV~l~d-~~~---~~~~i~lVMEyC~gGDLs~yi~~~-~~l~e~t~r~Fm~QLA~alq~L~~~~Ii 131 (429)
T KOG0595|consen 57 LSEIKILKELKHPNIVRLLD-CIE---DDDFIYLVMEYCNGGDLSDYIRRR-GRLPEATARHFMQQLASALQFLHENNII 131 (429)
T ss_pred HHHHHHHHhcCCcceeeEEE-EEe---cCCeEEEEEEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 45556677788999999888 443 35689999999 779999999665 5889999999999999999999999999
Q ss_pred ecccCCcceeeccC------CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCC
Q 002736 105 VHNVRPSCFVMSSF------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (886)
Q Consensus 105 HrDlkP~NIll~~~------~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 178 (886)
||||||+||||+.. -.+||+|||+++......
T Consensus 132 HRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~------------------------------------------ 169 (429)
T KOG0595|consen 132 HRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS------------------------------------------ 169 (429)
T ss_pred eccCCcceEEeccCCCCCCCceEEecccchhhhCCchh------------------------------------------
Confidence 99999999999864 358999999997653211
Q ss_pred CccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchH
Q 002736 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (886)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSl 258 (886)
...+.+|+|.|||||++....|+.|+|+||+
T Consensus 170 -------------------------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSi 200 (429)
T KOG0595|consen 170 -------------------------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSI 200 (429)
T ss_pred -------------------------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHH
Confidence 1223599999999999999999999999999
Q ss_pred HHHHHHHhc--CCCCCchhhHHhHhhcc-C-CCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 259 GVLLFELFC--PFSTGEEKTRTMSSLRH-R-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 259 Gvil~eLl~--pf~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
|+|||++++ |++...........++. . ..+.......+...+++...|..+|.+|.+..+.+.|+++...+
T Consensus 201 G~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 201 GTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 999999999 33344444444333333 2 23333344556677999999999999999999999999988754
No 59
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=299.04 Aligned_cols=205 Identities=20% Similarity=0.257 Sum_probs=169.8
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|+.|.. .+...+|+|+|.++| +|.++.. .++|+||| .+|+|.++|.+ ..+.++...+..++.||+.|++|||
T Consensus 85 ~f~~E~~--il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH 159 (362)
T KOG0192|consen 85 AFRREAS--LLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH 159 (362)
T ss_pred HHHHHHH--HHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4555543 445589999999776 8875432 68999999 99999999966 4688999999999999999999999
Q ss_pred ccC-eeecccCCcceeeccCC-ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 100 SQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 100 s~g-iiHrDlkP~NIll~~~~-~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----------------------------------------- 198 (362)
T KOG0192|consen 160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----------------------------------------- 198 (362)
T ss_pred cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-----------------------------------------
Confidence 999 99999999999999997 99999999995432110
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC--CCCCCccccc
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDI 255 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~~sDI 255 (886)
...+...||+.|||||++. ...|+.++||
T Consensus 199 -------------------------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dv 229 (362)
T KOG0192|consen 199 -------------------------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDV 229 (362)
T ss_pred -------------------------------------------------ccccCCCCCccccChhhhcCCCCcCCccchh
Confidence 0111137899999999999 5689999999
Q ss_pred chHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 256 wSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||||+||||+| ||........+.........|+.+..+.+.+..++.+||+.||..||++.+++.
T Consensus 230 ySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 230 YSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999 998877755555555566677767778899999999999999999999998876
No 60
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-32 Score=288.89 Aligned_cols=204 Identities=16% Similarity=0.181 Sum_probs=168.5
Q ss_pred ccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccC
Q 002736 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (886)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (886)
-||.|...|.+..|+|+|.|.| ||. ....|||+||| ..|-|.+.|+.. +.++......+.++|+.|++|||.+.
T Consensus 158 lkETdIKHLRkLkH~NII~FkG-VCt---qsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hK 232 (904)
T KOG4721|consen 158 LKETDIKHLRKLKHPNIITFKG-VCT---QSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHK 232 (904)
T ss_pred hhhhhHHHHHhccCcceeeEee-eec---CCceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhh
Confidence 4678889999999999999777 886 46789999999 778999999654 78899999999999999999999999
Q ss_pred eeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 103 iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|||||||.-||||+.+..|||+|||.++....-+
T Consensus 233 IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---------------------------------------------- 266 (904)
T KOG4721|consen 233 IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---------------------------------------------- 266 (904)
T ss_pred HhhhccCCCceEeeccceEEeccccchHhhhhhh----------------------------------------------
Confidence 9999999999999999999999999985431110
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil 262 (886)
....++||..|||||+|...+++.|+|||||||+|
T Consensus 267 ---------------------------------------------TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVL 301 (904)
T KOG4721|consen 267 ---------------------------------------------TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVL 301 (904)
T ss_pred ---------------------------------------------hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHH
Confidence 11124899999999999999999999999999999
Q ss_pred HHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCC
Q 002736 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 323 (886)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~ 323 (886)
||||| ||..-......+-.-....--+.+..++..++-|++.||.-.|..||++.++|.|-
T Consensus 302 WEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 302 WEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred HHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 99999 77544433333222222233455556677788999999999999999999999983
No 61
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=9.2e-31 Score=268.13 Aligned_cols=287 Identities=18% Similarity=0.342 Sum_probs=234.5
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcE
Q 002736 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (886)
Q Consensus 563 ~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V 642 (886)
.+..|.+.|.-+.|+++|++||+|+.|.+.-||++..... ........+|..+|..|.|+| +..+|++|+.|..+
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~yi~wSP-DdryLlaCg~~e~~ 293 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVSYIMWSP-DDRYLLACGFDEVL 293 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceEEEEECC-CCCeEEecCchHhe
Confidence 3467999999999999999999999999999999764211 122334567999999999999 68889999999999
Q ss_pred EEEECCCceEEEEecc-cCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec--CCCeEEEEEeC
Q 002736 643 QVWDVSRSQVLTEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT--KANVCCVQFPL 719 (886)
Q Consensus 643 ~iWd~~t~~~~~~~~~-h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp 719 (886)
.+||+.+|.....+.. |...+.+++|.| |+..+++|+.|+++..||+.... ...... ...|.+++..+
T Consensus 294 ~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDgn~--------~~~W~gvr~~~v~dlait~ 364 (519)
T KOG0293|consen 294 SLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDGNI--------LGNWEGVRDPKVHDLAITY 364 (519)
T ss_pred eeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEecCCcch--------hhcccccccceeEEEEEcC
Confidence 9999999998877753 568899999999 99999999999999999998532 112111 24589999999
Q ss_pred CCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeec
Q 002736 720 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG 798 (886)
Q Consensus 720 ~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~ 798 (886)
| |+++++...|..|++|+..+... .. +..-..+|++...+ ++.++++.=.+..|.+||+... ..++.+.|
T Consensus 365 D-gk~vl~v~~d~~i~l~~~e~~~d-r~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~------~lv~kY~G 435 (519)
T KOG0293|consen 365 D-GKYVLLVTVDKKIRLYNREARVD-RG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN------KLVRKYFG 435 (519)
T ss_pred C-CcEEEEEecccceeeechhhhhh-hc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh------hHHHHhhc
Confidence 9 88888888999999999876542 22 22344679999998 8888888888999999999965 55888999
Q ss_pred CCCceeE--EEEec-CCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEe
Q 002736 799 HTNVKNF--VGLSV-WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 875 (886)
Q Consensus 799 h~~~v~~--v~~sp-~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~ 875 (886)
|+..-.- -+|-- +..+||+||+|+.|+||+..+++++..+ .+|...|++|+|+|..+.++|+|+
T Consensus 436 hkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L-------------sGHs~~vNcVswNP~~p~m~ASas 502 (519)
T KOG0293|consen 436 HKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL-------------SGHSKTVNCVSWNPADPEMFASAS 502 (519)
T ss_pred ccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee-------------cCCcceeeEEecCCCCHHHhhccC
Confidence 9865322 24443 3469999999999999999999998654 456678999999999998999999
Q ss_pred CCCCEEEEEe
Q 002736 876 SSGNIKILEM 885 (886)
Q Consensus 876 ~dg~I~iw~l 885 (886)
+||+|+||..
T Consensus 503 DDgtIRIWg~ 512 (519)
T KOG0293|consen 503 DDGTIRIWGP 512 (519)
T ss_pred CCCeEEEecC
Confidence 9999999963
No 62
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=1e-30 Score=274.58 Aligned_cols=291 Identities=19% Similarity=0.333 Sum_probs=238.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+.+|+..|+++++.|.|..|++||.|-.|++||+........ ............|.++.|++ .+++|++.+....++
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~--~fr~l~P~E~h~i~sl~ys~-Tg~~iLvvsg~aqak 239 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMR--SFRQLQPCETHQINSLQYSV-TGDQILVVSGSAQAK 239 (641)
T ss_pred ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccch--hhhccCcccccccceeeecC-CCCeEEEEecCccee
Confidence 367899999999999999999999999999999987544332 23334455667899999999 678777777789999
Q ss_pred EEECCCceEEEE------------ecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec---
Q 002736 644 VWDVSRSQVLTE------------MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT--- 708 (886)
Q Consensus 644 iWd~~t~~~~~~------------~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~--- 708 (886)
|+|-...+.+.. -++|...++|.+|+|.+...|++|+.||+++|||++... .....+.+
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k------~q~qVik~k~~ 313 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTK------SQLQVIKTKPA 313 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCch------hheeEEeeccC
Confidence 999654443322 368999999999999888999999999999999998753 22333332
Q ss_pred ---CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCc-c-eEEEecCCC--CeEEEEec-CCCEEEEEECCCcEEEEe
Q 002736 709 ---KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI-P-LCTLIGHNK--TVSYVKFV-DATTLVSASTDNTLKLWD 780 (886)
Q Consensus 709 ---~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~-~-~~~~~~h~~--~V~~v~f~-~~~~l~sgs~Dg~i~lwd 780 (886)
.-++++++|+|+ +.+||+|+.||.|.+||.++... | ...-.+|.. .|+||+|+ +|++|+|-|.|+++++||
T Consensus 314 ~g~Rv~~tsC~~nrd-g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 314 GGKRVPVTSCAWNRD-GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred CCcccCceeeecCCC-cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeee
Confidence 346899999999 89999999999999999876432 2 345568887 89999998 999999999999999999
Q ss_pred CCCCCccccCCCceEeecCCC--ceeEEEEecCCCEEEEEcC------CCcEEEEecCCCCcceeeccCCCCCCCCCccc
Q 002736 781 LSMCTSRVIDTPLHSFTGHTN--VKNFVGLSVWDGYVATGSE------TNEVFVYHKAFPMPALSFNFNHADPLSGPETD 852 (886)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~h~~--~v~~v~~sp~g~~lasgs~------Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 852 (886)
++..+ +|+.+..|--+ +-+.++|||+.++|++|+. .|++++||..+-..++.+.+.
T Consensus 393 Lrq~k-----kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~----------- 456 (641)
T KOG0772|consen 393 LRQFK-----KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS----------- 456 (641)
T ss_pred ccccc-----cchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC-----------
Confidence 99875 67777776544 3577899999999999974 578999999888877776554
Q ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCCEEEE
Q 002736 853 DAAQFISSVCWRGQSSNTLVAANSSGNIKIL 883 (886)
Q Consensus 853 ~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw 883 (886)
...|..+.|+|.-+ .+.+++.||+++||
T Consensus 457 --~aSvv~~~WhpkLN-Qi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 457 --TASVVRCLWHPKLN-QIFAGSGDGTAHVY 484 (641)
T ss_pred --CceEEEEeecchhh-heeeecCCCceEEE
Confidence 23499999999999 89999999999997
No 63
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=302.37 Aligned_cols=208 Identities=18% Similarity=0.231 Sum_probs=171.7
Q ss_pred cccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCe
Q 002736 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (886)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (886)
.|...+.++. .||=.+.+|+ .-...+++|.+||| .||++..+... +.+++..++.|+..|+.||.|||++||
T Consensus 417 ~EkrI~~la~-~HPFL~~L~~----~fQT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~I 489 (694)
T KOG0694|consen 417 CEKRIFELAN-RHPFLVNLFS----CFQTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGI 489 (694)
T ss_pred HHHHHHHHhc-cCCeEeeccc----ccccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3434444444 7888888887 23467889999999 88886666533 679999999999999999999999999
Q ss_pred eecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccc
Q 002736 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (886)
Q Consensus 104 iHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 183 (886)
|+||||.+||||+..|++||+|||+|+.-...
T Consensus 490 IYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~------------------------------------------------ 521 (694)
T KOG0694|consen 490 IYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ------------------------------------------------ 521 (694)
T ss_pred eeeecchhheEEcccCcEEecccccccccCCC------------------------------------------------
Confidence 99999999999999999999999999643211
Q ss_pred ccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHH
Q 002736 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (886)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~ 263 (886)
...+.+.+|||.|||||++.+..|+.++|+|||||+||
T Consensus 522 ------------------------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLly 559 (694)
T KOG0694|consen 522 ------------------------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLY 559 (694)
T ss_pred ------------------------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHH
Confidence 00334569999999999999999999999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCCcCc
Q 002736 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRDS 331 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~~~ 331 (886)
|||. ||.+..+....-+++...++.|.+. +.++..++.++|..+|++|.. +.+|.+||||+.....
T Consensus 560 eML~Gq~PF~gddEee~FdsI~~d~~~yP~~l--s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~ 633 (694)
T KOG0694|consen 560 EMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL--SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWD 633 (694)
T ss_pred HHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcc--cHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHH
Confidence 9999 8877777776667777777666654 478889999999999999965 5889999999987643
No 64
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=288.49 Aligned_cols=212 Identities=19% Similarity=0.223 Sum_probs=165.5
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+....|+|+|.+.. +.|..+.+.+|+|.|| ..|.+. |......-+++.+++.|+++++.||+|||.|||||||
T Consensus 159 IailKkl~H~nVV~LiE--vLDDP~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRD 235 (576)
T KOG0585|consen 159 IAILKKLHHPNVVKLIE--VLDDPESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRD 235 (576)
T ss_pred HHHHHhcCCcCeeEEEE--eecCcccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 34455567788888777 5566788899999999 444443 3422222289999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|+||+.+|+|||+|||++..+.....++. |
T Consensus 236 IKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~-----------------------------d----------------- 269 (576)
T KOG0585|consen 236 IKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGS-----------------------------D----------------- 269 (576)
T ss_pred cchhheEEcCCCcEEeeccceeeecccCCcccc-----------------------------H-----------------
Confidence 999999999999999999999854311100000 0
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC----CCcccccchHHHHHH
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLF 263 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDIwSlGvil~ 263 (886)
. .....+|||.|+|||...++. .+++.|||||||+||
T Consensus 270 --------------------------------~-------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLY 310 (576)
T KOG0585|consen 270 --------------------------------D-------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLY 310 (576)
T ss_pred --------------------------------H-------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHH
Confidence 0 011138999999999998732 578999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.|+. ||+.........+++......|......+.+++||.+||.+||.+|++..+|..|||....
T Consensus 311 CllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 311 CLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 9997 9987776666656555555566666678889999999999999999999999999998765
No 65
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=7.1e-30 Score=247.95 Aligned_cols=287 Identities=15% Similarity=0.240 Sum_probs=249.7
Q ss_pred cCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCC
Q 002736 561 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (886)
Q Consensus 561 ~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg 640 (886)
..++.+|...|.+++|+-+|..+|+|+.|++++||+++.. .........+|.+.|-.++|.|..+.++++++.|.
T Consensus 13 ~r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-----r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk 87 (313)
T KOG1407|consen 13 RRELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-----RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDK 87 (313)
T ss_pred hHHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-----hhhhhhcccCCCcchhhheeCCCCCcceEEecCCc
Confidence 3556789999999999999999999999999999998763 11222334568889999999999999999999999
Q ss_pred cEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCC
Q 002736 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLD 720 (886)
Q Consensus 641 ~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 720 (886)
+|++||+++++++..+......++ +.|+| ++.+++.++.|..|...|.++ -+.....+.+..+.-++|+.+
T Consensus 88 ~ir~wd~r~~k~~~~i~~~~eni~-i~wsp-~g~~~~~~~kdD~it~id~r~-------~~~~~~~~~~~e~ne~~w~~~ 158 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIETKGENIN-ITWSP-DGEYIAVGNKDDRITFIDART-------YKIVNEEQFKFEVNEISWNNS 158 (313)
T ss_pred eEEEEEeccCcEEEEeeccCcceE-EEEcC-CCCEEEEecCcccEEEEEecc-------cceeehhcccceeeeeeecCC
Confidence 999999999999988876555565 78998 999999999999999999998 566666666778899999965
Q ss_pred CCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 721 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 721 ~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
+++|+..+..|+|.|......+ |+.++.+|.....||+|. +|++||+|+.|..+-|||+... -+++.+..+
T Consensus 159 -nd~Fflt~GlG~v~ILsypsLk-pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL------iC~R~isRl 230 (313)
T KOG1407|consen 159 -NDLFFLTNGLGCVEILSYPSLK-PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL------ICERCISRL 230 (313)
T ss_pred -CCEEEEecCCceEEEEeccccc-cccccccCCcceEEEEECCCCceEeeccccceeeccChhHh------hhheeeccc
Confidence 6777777778999999988777 799999999999999996 9999999999999999999987 458999999
Q ss_pred CCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCC--
Q 002736 800 TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSS-- 877 (886)
Q Consensus 800 ~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~d-- 877 (886)
.-+|+.+.||-+|++||+||+|..|-|=++.++..+..+. +.++...|+|+|..+ +||-|++|
T Consensus 231 dwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~--------------~~~~t~tVAWHPk~~-LLAyA~ddk~ 295 (313)
T KOG1407|consen 231 DWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP--------------CEGPTFTVAWHPKRP-LLAYACDDKD 295 (313)
T ss_pred cCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee--------------ccCCceeEEecCCCc-eeeEEecCCC
Confidence 9999999999999999999999999999999998887654 345688999999999 99988876
Q ss_pred -------CCEEEEE
Q 002736 878 -------GNIKILE 884 (886)
Q Consensus 878 -------g~I~iw~ 884 (886)
|++|+|-
T Consensus 296 ~d~~reag~vKiFG 309 (313)
T KOG1407|consen 296 GDSNREAGTVKIFG 309 (313)
T ss_pred CccccccceeEEec
Confidence 5777764
No 66
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.7e-32 Score=280.34 Aligned_cols=198 Identities=21% Similarity=0.317 Sum_probs=165.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+..||++++..|. |.+ +.+..+|+||| .||.|.+|+.+. +.|++.+++++|+||+.||.|+|.++|+|||||
T Consensus 106 IMSsLNHPhII~IyE-VFE---NkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLK 180 (668)
T KOG0611|consen 106 IMSSLNHPHIIQIYE-VFE---NKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLK 180 (668)
T ss_pred HHhhcCCCceeehhh-hhc---CCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccc
Confidence 456689999998777 444 56889999999 999999999654 789999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
.+||||+.++++||+|||++..+....
T Consensus 181 LENILLD~N~NiKIADFGLSNly~~~k----------------------------------------------------- 207 (668)
T KOG0611|consen 181 LENILLDQNNNIKIADFGLSNLYADKK----------------------------------------------------- 207 (668)
T ss_pred hhheeecCCCCeeeeccchhhhhcccc-----------------------------------------------------
Confidence 999999999999999999985443221
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCC-CcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDIwSlGvil~eLl~- 267 (886)
..+++||+|.|.+||+++|.+| ++.+|-|||||+||.|+.
T Consensus 208 --------------------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyG 249 (668)
T KOG0611|consen 208 --------------------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYG 249 (668)
T ss_pred --------------------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhc
Confidence 2334599999999999999997 678999999999999998
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
||.+. ++......+..+.+... ..+..+..||.|||..+|.+|.|+.+|-.|=|++-
T Consensus 250 tMPFDG~-Dhk~lvrQIs~GaYrEP--~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 250 TMPFDGR-DHKRLVRQISRGAYREP--ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred ccccCCc-hHHHHHHHhhcccccCC--CCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 88554 45555555555544322 23367789999999999999999999999988763
No 67
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.2e-31 Score=310.12 Aligned_cols=199 Identities=28% Similarity=0.432 Sum_probs=160.5
Q ss_pred CceEEEEeeCCcchhhhhcCCCCCc-ChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCC
Q 002736 55 DPFVHAIEWGDVSLRQWLDKPKRSV-DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (886)
Q Consensus 55 ~~~~i~~e~~g~sL~~~l~~~~~~l-~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~ 133 (886)
..+||.||||..+|..++...+... ...+.+++|+||++||.|+|++|||||||||.||+|++.++|||+|||+++...
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 4579999997777666664443333 578999999999999999999999999999999999999999999999997632
Q ss_pred CC--ccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccccccccc
Q 002736 134 SD--SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 211 (886)
Q Consensus 134 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (886)
.. ..+. +- ...
T Consensus 749 ~~~~~~d~------------------------------~~----~~~--------------------------------- 761 (1351)
T KOG1035|consen 749 ENLESIDQ------------------------------DL----SFS--------------------------------- 761 (1351)
T ss_pred hhhhhHhh------------------------------cc----Ccc---------------------------------
Confidence 10 0000 00 000
Q ss_pred ccccccccccCCCCCceeeeeccccceecccccCCCC---CCcccccchHHHHHHHHhcCCCCCchhhHHhHhhccCCCC
Q 002736 212 RVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288 (886)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDIwSlGvil~eLl~pf~~~~~~~~~~~~~~~~~~~ 288 (886)
...........|..+||..|+|||++.+.. |+.|+|+||||||||||+.||.+.+++..+...++...+|
T Consensus 762 -------~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP 834 (1351)
T KOG1035|consen 762 -------TNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIP 834 (1351)
T ss_pred -------ccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCC
Confidence 000011111345669999999999998754 9999999999999999999999999999999999988777
Q ss_pred hh---hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 289 PQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 289 ~~---~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
.. +.+..+..+.+|.+||+.||++||||.|+|++.||..
T Consensus 835 ~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 835 EPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred CCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 76 7778889999999999999999999999999999985
No 68
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.6e-32 Score=268.04 Aligned_cols=213 Identities=18% Similarity=0.268 Sum_probs=163.5
Q ss_pred ccccCceeecccccccCCCCCCcccccccc-CCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
|.|.++--++. .|+++|.... ++++... ...+.++||+ +||.|+..+..+ ...+++.++-.|++||..||.|||+
T Consensus 102 RrEVeLHw~~s-~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~ 179 (400)
T KOG0604|consen 102 RREVELHWMAS-GHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS 179 (400)
T ss_pred HhHhhhhhhhc-CCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 66655433332 4444444444 4444433 4568899999 999999999554 3569999999999999999999999
Q ss_pred cCeeecccCCcceeec---cCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 101 QGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 101 ~giiHrDlkP~NIll~---~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
.+|+||||||+|+|.. .+-.+|++|||+|+......
T Consensus 180 ~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~----------------------------------------- 218 (400)
T KOG0604|consen 180 MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG----------------------------------------- 218 (400)
T ss_pred cchhhccCChhheeeecCCCCcceEecccccccccCCCc-----------------------------------------
Confidence 9999999999999996 34569999999996542110
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
...+.+-||+|.|||++-..+|+.++|+||
T Consensus 219 --------------------------------------------------~L~TPc~TPyYvaPevlg~eKydkscdmwS 248 (400)
T KOG0604|consen 219 --------------------------------------------------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWS 248 (400)
T ss_pred --------------------------------------------------cccCCcccccccCHHHhCchhcCCCCCccc
Confidence 112236699999999998888999999999
Q ss_pred HHHHHHHHhc---CCCCCchhhH--Hh-Hhhcc---CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 258 LGVLLFELFC---PFSTGEEKTR--TM-SSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 258 lGvil~eLl~---pf~~~~~~~~--~~-~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||||+|-||| ||++...... -| ..++. .+..+.|...+...+++|+.+|.-+|++|.|+.+++.|||+...
T Consensus 249 lgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 249 LGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred hhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 9999999999 7766543211 11 22222 24456778888889999999999999999999999999999875
Q ss_pred c
Q 002736 329 R 329 (886)
Q Consensus 329 ~ 329 (886)
.
T Consensus 329 ~ 329 (400)
T KOG0604|consen 329 E 329 (400)
T ss_pred c
Confidence 4
No 69
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.4e-32 Score=290.93 Aligned_cols=223 Identities=20% Similarity=0.252 Sum_probs=172.4
Q ss_pred cCCCCCcccccccCceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHH
Q 002736 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 94 (886)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~ 94 (886)
+|.+--..|+.|...+.-.+ .|.++|.++. .|...+.+|++|||+..+|..+|++....++....+.|..|++.|
T Consensus 398 ~D~qtl~gy~nEI~lL~KLk-g~~~IIqL~D----YEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~a 472 (677)
T KOG0596|consen 398 ADNQTLDGYRNEIALLNKLK-GHDKIIQLYD----YEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLA 472 (677)
T ss_pred cCHHHHHHHHHHHHHHHHhc-CCceEEEEee----eeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHH
Confidence 33333456777776665555 4488888777 788899999999999999999998776666767999999999999
Q ss_pred HHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccc
Q 002736 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (886)
Q Consensus 95 l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 174 (886)
|.++|.+||||.||||.||||. .|.+||||||+|..+..+..
T Consensus 473 V~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT------------------------------------- 514 (677)
T KOG0596|consen 473 VKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT------------------------------------- 514 (677)
T ss_pred HHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc-------------------------------------
Confidence 9999999999999999999995 48999999999976543311
Q ss_pred cCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-------
Q 002736 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------- 247 (886)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------- 247 (886)
+......+||+-|||||.+...
T Consensus 515 ---------------------------------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~ 543 (677)
T KOG0596|consen 515 ---------------------------------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENG 543 (677)
T ss_pred ---------------------------------------------------ceeeccccCcccccCHHHHhhccccccCC
Confidence 0011224999999999998532
Q ss_pred ----CCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCC---ChhhhccChhhHHHHHHccCCCCCCCCCHH
Q 002736 248 ----PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 248 ----~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
+++.+|||||||||||+|+. ||..-......+..+..... .|.... ..++.+++..||..||.+||++.
T Consensus 544 ~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 544 KSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred CcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcH
Confidence 26789999999999999998 88665555555555554311 111111 12277999999999999999999
Q ss_pred HHhcCCCCCCCcCch
Q 002736 318 ELLQSEFLNEPRDSM 332 (886)
Q Consensus 318 eil~h~~~~~~~~~~ 332 (886)
++|+|||+...+.+.
T Consensus 623 eLLqhpFl~~~~i~~ 637 (677)
T KOG0596|consen 623 ELLQHPFLQIQPIPV 637 (677)
T ss_pred HHhcCcccccccccc
Confidence 999999999865443
No 70
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.2e-32 Score=268.03 Aligned_cols=195 Identities=18% Similarity=0.200 Sum_probs=157.8
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
..||+++.+-. +++ ....+++++|+ ..|.|+++|.+. -.+++.+.+.|++||++||.|||.++||||||||+||
T Consensus 80 ~GHP~II~l~D-~ye---s~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENI 154 (411)
T KOG0599|consen 80 MGHPYIIDLQD-VYE---SDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENI 154 (411)
T ss_pred cCCCcEEEeee-ecc---CcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhe
Confidence 56777776555 332 24457788888 789999999654 5789999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.+.++||.|||++..+...+
T Consensus 155 Llddn~~i~isDFGFa~~l~~Ge--------------------------------------------------------- 177 (411)
T KOG0599|consen 155 LLDDNMNIKISDFGFACQLEPGE--------------------------------------------------------- 177 (411)
T ss_pred eeccccceEEeccceeeccCCch---------------------------------------------------------
Confidence 99999999999999996553221
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----C-CCCCcccccchHHHHHHHHhc
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----G-APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~-~~~s~~sDIwSlGvil~eLl~ 267 (886)
+....||||.|+|||.+. + ..|+..+|+|++|||+|.||.
T Consensus 178 ----------------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa 223 (411)
T KOG0599|consen 178 ----------------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA 223 (411)
T ss_pred ----------------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence 223459999999999984 2 238999999999999999998
Q ss_pred ---CCCCCchhhHHhHhhcc---CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
||.... .......+.+ .+..|.|.+.+...++||.+||+.||.+|.|++|+|+||||.
T Consensus 224 GcpPFwHRk-QmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 224 GCPPFWHRK-QMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred CCCchhHHH-HHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 664332 2222223333 345788889999999999999999999999999999999995
No 71
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=8.3e-29 Score=261.28 Aligned_cols=315 Identities=18% Similarity=0.263 Sum_probs=252.3
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCC----CcEEEEEcCcccCcccccccceE
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d----~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
.+|...|.+++|+...-+.. |+ ..+..-.++|..|+|++|+++|++.|.. |.+.+||-.+.. -.
T Consensus 75 ASGD~sG~vRIWdtt~~~hi--LK-nef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~Sv---------Ge 142 (603)
T KOG0318|consen 75 ASGDVSGKVRIWDTTQKEHI--LK-NEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSV---------GE 142 (603)
T ss_pred eecCCcCcEEEEeccCccee--ee-eeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCcc---------ce
Confidence 56778999999997653322 22 2344568899999999999999988654 345566654321 12
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
..+|...|+++.|-|.-+-.++||+.|++|.+|+-.--+....++.|.+-|+|+.|+| |+..+++.+.||+|.|||=.+
T Consensus 143 i~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysP-DG~~Fat~gsDgki~iyDGkt 221 (603)
T KOG0318|consen 143 ITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKT 221 (603)
T ss_pred eeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECC-CCCeEEEecCCccEEEEcCCC
Confidence 3468888999999997788999999999999999877788888999999999999999 899999999999999999999
Q ss_pred hhhhhccCceeeeee----cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC-------------------------
Q 002736 693 AILLLHLGVSIGTIK----TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK------------------------- 743 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~----~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~------------------------- 743 (886)
+..+..+. |++.|..++|+|| +..|++.|+|.++++||+.+.+
T Consensus 222 -------ge~vg~l~~~~aHkGsIfalsWsPD-s~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~l 293 (603)
T KOG0318|consen 222 -------GEKVGELEDSDAHKGSIFALSWSPD-STQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHL 293 (603)
T ss_pred -------ccEEEEecCCCCccccEEEEEECCC-CceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeE
Confidence 55555554 6788999999999 8899999999999999987553
Q ss_pred -----------------cceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccc-----------------
Q 002736 744 -----------------IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRV----------------- 788 (886)
Q Consensus 744 -----------------~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~----------------- 788 (886)
.++.++.||.+.|+++..+ ++.+|+||+.||.|.-||..++.+..
T Consensus 294 ItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~ 373 (603)
T KOG0318|consen 294 ITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASE 373 (603)
T ss_pred EEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecC
Confidence 1345678999999999997 88999999999999999986543210
Q ss_pred --------------------------------------------------------------------------------
Q 002736 789 -------------------------------------------------------------------------------- 788 (886)
Q Consensus 789 -------------------------------------------------------------------------------- 788 (886)
T Consensus 374 ~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~ 453 (603)
T KOG0318|consen 374 SGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP 453 (603)
T ss_pred CCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcC
Confidence
Q ss_pred ----------------------cCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCC
Q 002736 789 ----------------------IDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL 846 (886)
Q Consensus 789 ----------------------~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~ 846 (886)
.......+..|.++|++|++|||+.|||+|...+.|.+||+.+.+....
T Consensus 454 ~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~--------- 524 (603)
T KOG0318|consen 454 DGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTN--------- 524 (603)
T ss_pred CCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecc---------
Confidence 0001112345778899999999999999999999999999888665221
Q ss_pred CCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 847 SGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 847 ~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
..-=|...|++|+|+|++. +||||+-|-+|.||+|
T Consensus 525 ---~w~FHtakI~~~aWsP~n~-~vATGSlDt~Viiysv 559 (603)
T KOG0318|consen 525 ---RWAFHTAKINCVAWSPNNK-LVATGSLDTNVIIYSV 559 (603)
T ss_pred ---eeeeeeeeEEEEEeCCCce-EEEeccccceEEEEEc
Confidence 1122567799999999999 9999999999999986
No 72
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.97 E-value=7.9e-31 Score=274.61 Aligned_cols=266 Identities=19% Similarity=0.259 Sum_probs=230.8
Q ss_pred cccccccccceEEeeecC-ceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEE
Q 002736 535 GWINPFLEGLCKYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (886)
Q Consensus 535 ~~~~~~~d~~~~~w~~~~-~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~ 613 (886)
=+++++.|+.|++|++-. +++++++ .+|..+|.+++|+.+|..|+++|.|+.||+||.+++ .....
T Consensus 229 LlLS~gmD~~vklW~vy~~~~~lrtf-----~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG--------~~~~~ 295 (503)
T KOG0282|consen 229 LLLSGGMDGLVKLWNVYDDRRCLRTF-----KGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG--------QVLSR 295 (503)
T ss_pred EEEecCCCceEEEEEEecCcceehhh-----hcchhhhhhhhccccCCeeeeeecceeeeeeccccc--------eEEEE
Confidence 358899999999999765 7777666 789999999999999999999999999999999884 33455
Q ss_pred ecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchh
Q 002736 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (886)
Q Consensus 614 ~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~ 693 (886)
+.....+.|+.|+|.+.+++++|+.|+.|+.||+++++.++++..|-+.|.++.|-+ ++..+++.++|++++||+.+.
T Consensus 296 f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~-~g~rFissSDdks~riWe~~~- 373 (503)
T KOG0282|consen 296 FHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD-EGRRFISSSDDKSVRIWENRI- 373 (503)
T ss_pred EecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc-CCceEeeeccCccEEEEEcCC-
Confidence 667778999999998779999999999999999999999999999999999999997 999999999999999999988
Q ss_pred hhhhccCceeeeeec--CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC--cceEEEecCCCCe--EEEEec-CCCE
Q 002736 694 ILLLHLGVSIGTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNKTV--SYVKFV-DATT 766 (886)
Q Consensus 694 ~~~~~~~~~~~~~~~--~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~--~~~~~~~~h~~~V--~~v~f~-~~~~ 766 (886)
+..+..+.. .....|+..+|+ +.++++-+.|+.|.+|.+...- .....|.||..+- ..|.|+ ||.+
T Consensus 374 ------~v~ik~i~~~~~hsmP~~~~~P~-~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~ 446 (503)
T KOG0282|consen 374 ------PVPIKNIADPEMHTMPCLTLHPN-GKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRT 446 (503)
T ss_pred ------CccchhhcchhhccCcceecCCC-CCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCe
Confidence 444443332 234679999999 8999999999999999975431 2245688998654 456677 9999
Q ss_pred EEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCC-EEEEEcCCCcEEEEe
Q 002736 767 LVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYH 828 (886)
Q Consensus 767 l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~lasgs~Dg~v~iwd 828 (886)
|+||+.||.+.+||.++. ..+..+++|..++..+.|+|... .+||||.||.|++||
T Consensus 447 l~SGdsdG~v~~wdwkt~------kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 447 LCSGDSDGKVNFWDWKTT------KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEeecCCccEEEeechhh------hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999987 45889999999999999999854 899999999999996
No 73
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1e-28 Score=270.22 Aligned_cols=325 Identities=15% Similarity=0.237 Sum_probs=262.7
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccC----------
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN---------- 602 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~---------- 602 (886)
.+-+++|..|-.+++|.....+- +....+.+|+++|-++-|..|..-+.|.+.||.|.+|.+.....
T Consensus 157 Sr~l~~gsrD~s~rl~~v~~~k~---~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~e 233 (893)
T KOG0291|consen 157 SRLLVTGSRDLSARLFGVDGNKN---LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEE 233 (893)
T ss_pred CceEEeccccceEEEEEeccccc---cceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCccccccccccc
Confidence 34556778888899998877654 33345678999999999999999999999999999999872100
Q ss_pred ----------ccccc---ccce---E-EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEE
Q 002736 603 ----------ENRDI---HYPV---V-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWS 665 (886)
Q Consensus 603 ----------~~~~~---~~~~---~-~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~ 665 (886)
..... .+.. . ......+|+|.+|++ .-++|++|=..|...++.+..-..+..+.-...+|..
T Consensus 234 g~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~-~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t 312 (893)
T KOG0291|consen 234 GSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHK-GTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILT 312 (893)
T ss_pred ccccccccccchhhhcceEEEEEEeeeecccccceeeeeccC-CceEEEEEecCCeeEEEecCCceEEEEeecccceeeE
Confidence 00000 1111 1 112347899999998 6789999999999999999999999998877889999
Q ss_pred EEEccCCCCEEEEEeCC-CcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC
Q 002736 666 IDFSSADPTLLASGSDD-GSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK 743 (886)
Q Consensus 666 v~~~p~~~~~l~sgs~D-g~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~ 743 (886)
+.|+. .|+++|.|+.. |.+-||+..+ ...+.... |...++|++++|| |+++|+|+.||.|++||.+.+-
T Consensus 313 ~~~N~-tGDWiA~g~~klgQLlVweWqs-------EsYVlKQQgH~~~i~~l~YSpD-gq~iaTG~eDgKVKvWn~~Sgf 383 (893)
T KOG0291|consen 313 VSFNS-TGDWIAFGCSKLGQLLVWEWQS-------ESYVLKQQGHSDRITSLAYSPD-GQLIATGAEDGKVKVWNTQSGF 383 (893)
T ss_pred EEecc-cCCEEEEcCCccceEEEEEeec-------cceeeeccccccceeeEEECCC-CcEEEeccCCCcEEEEeccCce
Confidence 99996 89999988765 8999999988 44444433 4567999999999 9999999999999999999887
Q ss_pred cceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCcc-----------------------------------
Q 002736 744 IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR----------------------------------- 787 (886)
Q Consensus 744 ~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~----------------------------------- 787 (886)
+..+|..|...|+.+.|+ .++.++|+|-||+|+.||+.....-
T Consensus 384 -C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~Ifv 462 (893)
T KOG0291|consen 384 -CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFV 462 (893)
T ss_pred -EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEE
Confidence 499999999999999998 9999999999999999998643220
Q ss_pred ---ccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEc
Q 002736 788 ---VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWR 864 (886)
Q Consensus 788 ---~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s 864 (886)
...+.+..+.||.++|.+++|+|.|..||+||+|.+|++||+-...... +.-.+..-|.+|+|+
T Consensus 463 WS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~v-------------Etl~i~sdvl~vsfr 529 (893)
T KOG0291|consen 463 WSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTV-------------ETLEIRSDVLAVSFR 529 (893)
T ss_pred EEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCcee-------------eeEeeccceeEEEEc
Confidence 0234556788999999999999999999999999999999987542221 112233459999999
Q ss_pred cCCCcEEEEEeCCCCEEEEEe
Q 002736 865 GQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 865 ~~~~~~l~s~~~dg~I~iw~l 885 (886)
|+|. -|+.+..||.|-+||.
T Consensus 530 PdG~-elaVaTldgqItf~d~ 549 (893)
T KOG0291|consen 530 PDGK-ELAVATLDGQITFFDI 549 (893)
T ss_pred CCCC-eEEEEEecceEEEEEh
Confidence 9999 9999999999999985
No 74
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.97 E-value=6.4e-32 Score=288.58 Aligned_cols=200 Identities=20% Similarity=0.264 Sum_probs=168.2
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCc
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~ 111 (886)
+...+|+|++.++. .-....++++|.||+-|+|+.+|... +.++++.++.|..|++.||.|||+.+|+|||+||.
T Consensus 55 ~r~lkHpniv~m~e----sfEt~~~~~vVte~a~g~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPq 129 (808)
T KOG0597|consen 55 LRSLKHPNIVEMLE----SFETSAHLWVVTEYAVGDLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQ 129 (808)
T ss_pred HHhcCCcchhhHHH----hhcccceEEEEehhhhhhHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcc
Confidence 34578999999777 23345778999999777999999554 78999999999999999999999999999999999
Q ss_pred ceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCC
Q 002736 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (886)
Q Consensus 112 NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (886)
||||...|++|++|||+++..+...
T Consensus 130 niLl~~~~~~KlcdFg~Ar~m~~~t------------------------------------------------------- 154 (808)
T KOG0597|consen 130 NILLEKGGTLKLCDFGLARAMSTNT------------------------------------------------------- 154 (808)
T ss_pred eeeecCCCceeechhhhhhhcccCc-------------------------------------------------------
Confidence 9999999999999999996543210
Q ss_pred ccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---C
Q 002736 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (886)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---p 268 (886)
.-.+...|||.|||||++.+.+|+..+|+||||||||||+. |
T Consensus 155 -----------------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PP 199 (808)
T KOG0597|consen 155 -----------------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPP 199 (808)
T ss_pred -----------------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCC
Confidence 02344589999999999999999999999999999999999 7
Q ss_pred CCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|+...-...+..++.....+|. ..++.+..|++.+|.+||.+|.+..+++.|||.++.
T Consensus 200 F~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 200 FYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred chHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 7666555555555555555554 567889999999999999999999999999998753
No 75
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=3.6e-31 Score=265.26 Aligned_cols=267 Identities=18% Similarity=0.327 Sum_probs=226.7
Q ss_pred cccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEe
Q 002736 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (886)
Q Consensus 535 ~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~ 614 (886)
..++|..|++|++||-.+..+...| .||.+.|.|+.|+. +.+++|+.|.+|+|||+++... ....+
T Consensus 209 kiVSGlrDnTikiWD~n~~~c~~~L-----~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~-------l~tli 274 (499)
T KOG0281|consen 209 KIVSGLRDNTIKIWDKNSLECLKIL-----TGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEP-------LNTLI 274 (499)
T ss_pred hhhcccccCceEEeccccHHHHHhh-----hcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCch-------hhHHh
Confidence 4588899999999999998887655 78999999999875 5999999999999999987422 12345
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCce---EEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCc
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~ 691 (886)
.|...|..+.|+ ..+++|++.|.++.+||+.... +.+.+.+|.+.|+.++|+ ..+++++|.|.+|++|++.
T Consensus 275 hHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd---~kyIVsASgDRTikvW~~s 348 (499)
T KOG0281|consen 275 HHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTIKVWSTS 348 (499)
T ss_pred hhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc---cceEEEecCCceEEEEecc
Confidence 688899999997 5799999999999999997654 345678999999999997 3599999999999999999
Q ss_pred hhhhhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEE
Q 002736 692 QAILLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSA 770 (886)
Q Consensus 692 ~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sg 770 (886)
+ ...+.++.. +..|.|+++. ++++++||.|.+|++||+..+.. +..++||+.-|.+|.| +.+.++||
T Consensus 349 t-------~efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~c-LRvLeGHEeLvRciRF-d~krIVSG 416 (499)
T KOG0281|consen 349 T-------CEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF-DNKRIVSG 416 (499)
T ss_pred c-------eeeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHH-HHHHhchHHhhhheee-cCceeeec
Confidence 9 777777764 5679999986 78999999999999999999985 9999999999999999 57889999
Q ss_pred ECCCcEEEEeCCCCCcc---ccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcc
Q 002736 771 STDNTLKLWDLSMCTSR---VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 835 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~ 835 (886)
..||+|++||+...... ...-++.++..|++.|..+.| |...|++++.|.+|-|||+..+.+.
T Consensus 417 aYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 417 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred cccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence 99999999999875421 111257788889999998888 4568999999999999999876554
No 76
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=279.56 Aligned_cols=216 Identities=16% Similarity=0.167 Sum_probs=167.0
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.+|+|..... -.+|||++.++| .......++++|.| .+||+.+.|+.. ...+++..+..|++++++||+|||
T Consensus 70 ~l~kE~~~ms--l~~HPNIv~~~~----sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH 143 (516)
T KOG0582|consen 70 ALRKEVQTMS--LIDHPNIVTYHC----SFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH 143 (516)
T ss_pred HHHHHHHHhh--hcCCCCcceEEE----EEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH
Confidence 4466654444 358999999877 33445678889998 999999999542 345899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
.+|-||||||+.||||+.+|.|||+|||+....-... .
T Consensus 144 ~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G-~----------------------------------------- 181 (516)
T KOG0582|consen 144 QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG-D----------------------------------------- 181 (516)
T ss_pred hcCceecccccccEEEcCCCcEEEcCceeeeeecccC-c-----------------------------------------
Confidence 9999999999999999999999999999873221100 0
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC--CCCCcccccch
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYR 257 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDIwS 257 (886)
+ ........+||++|||||++.. ..|++|+||||
T Consensus 182 ----------------R----------------------------~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwS 217 (516)
T KOG0582|consen 182 ----------------R----------------------------QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWS 217 (516)
T ss_pred ----------------e----------------------------eeEeeccccCcccccChHHhhhcccCccchhhhhh
Confidence 0 0001134599999999999654 45999999999
Q ss_pred HHHHHHHHhc---CCCCCchhhHHhHhhccCCCChh--------hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 258 lGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
||++..||.+ ||.........+..+...+..+. .......+..++..||++||.+||||+++|+|+||+
T Consensus 218 fGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk 297 (516)
T KOG0582|consen 218 FGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK 297 (516)
T ss_pred hhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence 9999999999 88776666666666665543111 112234567999999999999999999999999998
Q ss_pred CCc
Q 002736 327 EPR 329 (886)
Q Consensus 327 ~~~ 329 (886)
...
T Consensus 298 ~~k 300 (516)
T KOG0582|consen 298 KAK 300 (516)
T ss_pred hcc
Confidence 754
No 77
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.3e-32 Score=280.33 Aligned_cols=214 Identities=18% Similarity=0.207 Sum_probs=164.1
Q ss_pred cCceeecccccccCCCCCCcccccccc-CCceEEEEeeCCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccC
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (886)
++...+...+|+|++++..-+...... .-...++|||..-+|.+.++. .+..++..+++-|..||+.||.|||+.|
T Consensus 66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~ 145 (364)
T KOG0658|consen 66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG 145 (364)
T ss_pred HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC
Confidence 344444477899888766623332222 224568999999999999963 3578999999999999999999999999
Q ss_pred eeecccCCcceeeccC-CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcc
Q 002736 103 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (886)
Q Consensus 103 iiHrDlkP~NIll~~~-~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 181 (886)
|+||||||+|+|++++ |.+||+|||.|+.+...+.
T Consensus 146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep-------------------------------------------- 181 (364)
T KOG0658|consen 146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP-------------------------------------------- 181 (364)
T ss_pred cccCCCChheEEEcCCCCeEEeccCCcceeeccCCC--------------------------------------------
Confidence 9999999999999965 8999999999976533211
Q ss_pred ccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHH
Q 002736 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 260 (886)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGv 260 (886)
...+.-|.+|+|||.+.|.. |+++.||||.||
T Consensus 182 -----------------------------------------------niSYicSRyYRaPELifga~~Yt~~IDiWSaGC 214 (364)
T KOG0658|consen 182 -----------------------------------------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGC 214 (364)
T ss_pred -----------------------------------------------ceeEEEeccccCHHHHcCccccCceeEEhhhhH
Confidence 12347799999999999965 999999999999
Q ss_pred HHHHHhc--CCCCCchhhHHhHhhccC-------------------CCC----h-----hhhccChhhHHHHHHccCCCC
Q 002736 261 LLFELFC--PFSTGEEKTRTMSSLRHR-------------------VLP----P-----QLLLKFPKEASFCLWLLHPEP 310 (886)
Q Consensus 261 il~eLl~--pf~~~~~~~~~~~~~~~~-------------------~~~----~-----~~~~~~~~~~~li~~~L~~dP 310 (886)
++.||+- |++.++.....+..+..- .+| . ......+++.+|+.++|.++|
T Consensus 215 V~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P 294 (364)
T KOG0658|consen 215 VMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSP 294 (364)
T ss_pred HHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccCh
Confidence 9999998 777765444333222110 001 1 123356788899999999999
Q ss_pred CCCCCHHHHhcCCCCCCCcCc
Q 002736 311 SGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 311 ~~Rps~~eil~h~~~~~~~~~ 331 (886)
.+|.++.|++.||||++...+
T Consensus 295 ~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 295 SKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999976544
No 78
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.3e-29 Score=277.29 Aligned_cols=283 Identities=17% Similarity=0.256 Sum_probs=243.7
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd 646 (886)
-++.|.+++|+|.-..++|+--+|.|++||+.-... .-....|.++|..|+|+| ...+++||+.|-+|+||+
T Consensus 8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tl-------i~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWn 79 (1202)
T KOG0292|consen 8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTL-------IDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWN 79 (1202)
T ss_pred ccccccceecCCCCCEEEEeecCceeeeehhhhhhH-------HhhhhccCCccceeeecC-CCCeEEecCCccEEEEEe
Confidence 467899999999999999999999999999864211 112346999999999999 689999999999999999
Q ss_pred CCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCCCcEE
Q 002736 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDSGRSL 725 (886)
Q Consensus 647 ~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l 725 (886)
..+.+++.++.+|-+-|..+.|++ .--+++|+|+|.+|+||+..+ +.++..+.+ ...|.|.+|+|. ..++
T Consensus 80 Yk~rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqs-------r~~iavltGHnHYVMcAqFhpt-EDlI 150 (1202)
T KOG0292|consen 80 YKTRRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQS-------RKCIAVLTGHNHYVMCAQFHPT-EDLI 150 (1202)
T ss_pred cccceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccC-------CceEEEEecCceEEEeeccCCc-cceE
Confidence 999999999999999999999997 777999999999999999999 888888775 456999999998 7899
Q ss_pred EEEeCCCeEEEEecCCCC----------------------------cceEEEecCCCCeEEEEec-CCCEEEEEECCCcE
Q 002736 726 AFGSADHRIYYYDLRNSK----------------------------IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTL 776 (886)
Q Consensus 726 ~~gs~Dg~I~vwDlr~~~----------------------------~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i 776 (886)
+++|-|.+|++||+...+ ...+.+.||...|+-++|+ .-.+|+||+.|..|
T Consensus 151 VSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqV 230 (1202)
T KOG0292|consen 151 VSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 230 (1202)
T ss_pred EEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCccee
Confidence 999999999999975321 1134678999999999997 66899999999999
Q ss_pred EEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCC
Q 002736 777 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQ 856 (886)
Q Consensus 777 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (886)
++|..+..+. -.+.+..||.+.|.++-|+|....|++.|+|++|+|||+...+.+.+|+-.+ +
T Consensus 231 KlWrmnetKa----WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrren-------------d 293 (1202)
T KOG0292|consen 231 KLWRMNETKA----WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRREN-------------D 293 (1202)
T ss_pred eEEEeccccc----eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccC-------------C
Confidence 9999987653 3467889999999999999999999999999999999999999998876433 3
Q ss_pred cEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 857 FISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 857 ~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
.-+.++-+|..+ |.+|+.|+-+-||.+
T Consensus 294 RFW~laahP~lN--LfAAgHDsGm~VFkl 320 (1202)
T KOG0292|consen 294 RFWILAAHPELN--LFAAGHDSGMIVFKL 320 (1202)
T ss_pred eEEEEEecCCcc--eeeeecCCceEEEEE
Confidence 488999999999 666666666777764
No 79
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=285.09 Aligned_cols=207 Identities=17% Similarity=0.205 Sum_probs=166.9
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
.+..++++.+++++..+|+ .+. ....+.++||| .||++.+.|+.. ..+.+.++..|+++++.||+|||+++.+|
T Consensus 60 qei~~Ls~~~~~~it~yyg-syl---~g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiH 134 (467)
T KOG0201|consen 60 QEISVLSQCDSPNITEYYG-SYL---KGTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIH 134 (467)
T ss_pred HHHHHHHhcCcchHHhhhh-hee---ecccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceec
Confidence 3567788888888877777 222 23457788999 899999999543 45699999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
||||+.|||+...|.||++|||++-......
T Consensus 135 rDIKaanil~s~~g~vkl~DfgVa~ql~~~~------------------------------------------------- 165 (467)
T KOG0201|consen 135 RDIKAANILLSESGDVKLADFGVAGQLTNTV------------------------------------------------- 165 (467)
T ss_pred ccccccceeEeccCcEEEEecceeeeeechh-------------------------------------------------
Confidence 9999999999999999999999984332110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
.+..+.+|||.|||||++.+..|+.++||||||++.+||
T Consensus 166 -----------------------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl 204 (467)
T KOG0201|consen 166 -----------------------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL 204 (467)
T ss_pred -----------------------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHH
Confidence 011335999999999999988899999999999999999
Q ss_pred hc--CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 266 FC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
++ |.........++..+.....|..-...++.+++|+..||.+||+.||+|.++|+|+|++..
T Consensus 205 a~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 205 AKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred hcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 99 5545555555555555544444444566779999999999999999999999999999874
No 80
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=285.19 Aligned_cols=195 Identities=22% Similarity=0.262 Sum_probs=164.9
Q ss_pred cccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceee
Q 002736 37 HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (886)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll 115 (886)
|+|++.++. ++++ .+.++++||+ .||.|.+.|.+. .+++.++..+++||+++|.|||++||+||||||+|||+
T Consensus 95 hpniv~l~~-~~e~---~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~ 168 (382)
T KOG0032|consen 95 HPNIVQLKD-AFED---PDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLL 168 (382)
T ss_pred CCCEEEEEE-EEEc---CCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeee
Confidence 888888777 5544 3578999999 889999999655 38999999999999999999999999999999999999
Q ss_pred ccC----CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCC
Q 002736 116 SSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (886)
Q Consensus 116 ~~~----~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (886)
... +.+|++|||++.......
T Consensus 169 ~~~~~~~~~ik~~DFGla~~~~~~~------------------------------------------------------- 193 (382)
T KOG0032|consen 169 ASKDEGSGRIKLIDFGLAKFIKPGE------------------------------------------------------- 193 (382)
T ss_pred ccccCCCCcEEEeeCCCceEccCCc-------------------------------------------------------
Confidence 633 479999999996543210
Q ss_pred ccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---C
Q 002736 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (886)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---p 268 (886)
.....+||+.|+|||++.+.+|+..+||||+||++|.|+| |
T Consensus 194 ------------------------------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~P 237 (382)
T KOG0032|consen 194 ------------------------------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPP 237 (382)
T ss_pred ------------------------------------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCC
Confidence 2334599999999999998999999999999999999999 8
Q ss_pred CCCCchhhHHhHhhccC--CCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 269 FSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 269 f~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|............+... +..+.|...+..+.+|+..||..||.+|+|+.++|+|||+...
T Consensus 238 F~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 238 FWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 87776555555444443 4466778888999999999999999999999999999999875
No 81
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.9e-31 Score=287.76 Aligned_cols=206 Identities=18% Similarity=0.189 Sum_probs=172.6
Q ss_pred cCceeecccccccCCCCCCccccccccCCc-eEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCe
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDP-FVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (886)
.++.+++...||+++.+... ..+.+. .+|+|+| +||+|.+.|++.. ..++++.+..+|.||+.||+|||+++|
T Consensus 52 ~E~~lis~~~hP~iv~y~ds----~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i 127 (426)
T KOG0589|consen 52 QEMDLLSKLLHPNIVEYKDS----FEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV 127 (426)
T ss_pred HHHHHHHhccCCCeeeeccc----hhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh
Confidence 45566777899999998872 233455 8999999 9999999996554 578999999999999999999999999
Q ss_pred eecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccc
Q 002736 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (886)
Q Consensus 104 iHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 183 (886)
+|||||++||+++.++.||+.|||+++..+.+..
T Consensus 128 LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~---------------------------------------------- 161 (426)
T KOG0589|consen 128 LHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS---------------------------------------------- 161 (426)
T ss_pred hcccchhhhhhccccCceeecchhhhhhcCCchh----------------------------------------------
Confidence 9999999999999999999999999987654420
Q ss_pred ccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHH
Q 002736 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (886)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~ 263 (886)
....++||+.||+||.+.+.+|+.++|||||||++|
T Consensus 162 --------------------------------------------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~y 197 (426)
T KOG0589|consen 162 --------------------------------------------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLY 197 (426)
T ss_pred --------------------------------------------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHH
Confidence 112359999999999999999999999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
||++ +|...+.....+++.. ....|.+...+.++..++..||..+|..||++.++|.+|.+..
T Consensus 198 Em~~lk~aF~a~~m~~Li~ki~~-~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 198 EMCTLKPAFKASNMSELILKINR-GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred HHHhcccccCccchHHHHHHHhh-ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 9999 6655555555555444 4466777778889999999999999999999999999876553
No 82
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=5.7e-31 Score=289.69 Aligned_cols=202 Identities=19% Similarity=0.238 Sum_probs=160.2
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ ++. ..+.++++||| .|++|.+++.+. +.+++.+++.|+.||+.||+|||++||+||||
T Consensus 47 ~~l~~l~hp~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDl 121 (323)
T cd05571 47 RVLQNTRHPFLTALKY-SFQ---THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121 (323)
T ss_pred HHHHhCCCCCCCCEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 3455668888888666 333 35678999999 889999999654 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+||+|||+++.......
T Consensus 122 kp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------------------------------------------- 150 (323)
T cd05571 122 KLENLMLDKDGHIKITDFGLCKEGISDGA--------------------------------------------------- 150 (323)
T ss_pred CHHHEEECCCCCEEEeeCCCCcccccCCC---------------------------------------------------
Confidence 99999999999999999999853211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 151 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg 191 (323)
T cd05571 151 ---------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191 (323)
T ss_pred ---------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcC
Confidence 0112378999999999999889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||................. ..+....+.+.+||.+||+.||.+|| ++.++++||||...
T Consensus 192 ~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 192 RLPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 7765544333322222221 22234567889999999999999999 89999999999875
No 83
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1e-28 Score=281.98 Aligned_cols=271 Identities=21% Similarity=0.364 Sum_probs=229.4
Q ss_pred ccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEec
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~ 615 (886)
.+.+..++++++|+..+.+. ..+ ..+.+|...|++++|+||++++++|+.|++|+|||+.. .........+
T Consensus 174 l~~~~~~~~i~~~~~~~~~~-~~~--~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~------~~~~~~~l~g 244 (456)
T KOG0266|consen 174 LAAASSDGLIRIWKLEGIKS-NLL--RELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD------DGRNLKTLKG 244 (456)
T ss_pred EEEccCCCcEEEeecccccc-hhh--ccccccccceeeeEECCCCcEEEEecCCceEEEeeccC------CCeEEEEecC
Confidence 57777899999999977663 111 33378999999999999999999999999999999943 1123344558
Q ss_pred CCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhh
Q 002736 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (886)
Q Consensus 616 ~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~ 695 (886)
|...|++++|+|. +++++||++|++|+|||+++++++..+.+|...|.+++|++ ++++|++++.|+.|+|||+.+...
T Consensus 245 H~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 245 HSTYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred CCCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEEcCCCccEEEEECCCCce
Confidence 9999999999995 59999999999999999999999999999999999999998 999999999999999999998321
Q ss_pred hhccCceeeeeec--CC-CeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEe---c-CCCEEE
Q 002736 696 LLHLGVSIGTIKT--KA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKF---V-DATTLV 768 (886)
Q Consensus 696 ~~~~~~~~~~~~~--~~-~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f---~-~~~~l~ 768 (886)
. +...+.. .. .+++++|+|+ +.++++++.|+.+++||++.... +..+.+|...+.++.. + .+.+++
T Consensus 323 ~-----~~~~~~~~~~~~~~~~~~fsp~-~~~ll~~~~d~~~~~w~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (456)
T KOG0266|consen 323 L-----CLKLLSGAENSAPVTSVQFSPN-GKYLLSASLDRTLKLWDLRSGKS-VGTYTGHSNLVRCIFSPTLSTGGKLIY 395 (456)
T ss_pred e-----eeecccCCCCCCceeEEEECCC-CcEEEEecCCCeEEEEEccCCcc-eeeecccCCcceeEecccccCCCCeEE
Confidence 0 2333332 12 6899999999 99999999999999999999885 7888888876533321 2 889999
Q ss_pred EEECCCcEEEEeCCCCCccccCCCceEeecC-CCceeEEEEecCCCEEEEEc--CCCcEEEEecC
Q 002736 769 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGH-TNVKNFVGLSVWDGYVATGS--ETNEVFVYHKA 830 (886)
Q Consensus 769 sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h-~~~v~~v~~sp~g~~lasgs--~Dg~v~iwd~~ 830 (886)
+|+.|+.|.+||+.+. ..+..+.+| ...+..+.++|...++++++ .|+.+++|...
T Consensus 396 sg~~d~~v~~~~~~s~------~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 396 SGSEDGSVYVWDSSSG------GILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred EEeCCceEEEEeCCcc------chhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 9999999999999986 458889999 89999999999999999999 79999999643
No 84
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=1.1e-30 Score=283.11 Aligned_cols=203 Identities=17% Similarity=0.193 Sum_probs=154.5
Q ss_pred eecccccccCCCCCCccccc--cccCCceEEEEeeCCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 31 ELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
.+...+|+|++..++ +|.. ......++++|||.+++|.+++... ...+++.+++.++.||+.||.|||++||+|||
T Consensus 57 ~l~~~~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~d 135 (290)
T cd07862 57 HLETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 135 (290)
T ss_pred hhcccCCCCcceEEE-EEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 344567899988776 5532 1234568999999888999999543 34589999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+|++|||++.......
T Consensus 136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 164 (290)
T cd07862 136 LKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------------- 164 (290)
T ss_pred CCHHHEEEcCCCCEEEccccceEeccCCc---------------------------------------------------
Confidence 99999999999999999999985331110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......||++|+|||.+.+..++.++|||||||++|||++
T Consensus 165 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 165 ----------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred ----------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 0111368999999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCC--C-----------------------hhhhccChhhHHHHHHccCCCCCCCCCHHHH
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVL--P-----------------------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~--~-----------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 319 (886)
||............+..... + .......+.+.+|+.+||+.||++|||+.|+
T Consensus 205 g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 205 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 55544333222222111000 0 0112344566799999999999999999999
Q ss_pred hcCCCC
Q 002736 320 LQSEFL 325 (886)
Q Consensus 320 l~h~~~ 325 (886)
|+||||
T Consensus 285 l~hp~f 290 (290)
T cd07862 285 LSHPYF 290 (290)
T ss_pred hcCCCC
Confidence 999997
No 85
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=4.7e-29 Score=251.43 Aligned_cols=271 Identities=16% Similarity=0.234 Sum_probs=231.3
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
+.-|++|..|+++++||+.+++.+.+| .+|...|..+++++--.|+++++.|+.||.||++... ..-.
T Consensus 163 n~wf~tgs~DrtikIwDlatg~Lkltl-----tGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk-------vIR~ 230 (460)
T KOG0285|consen 163 NEWFATGSADRTIKIWDLATGQLKLTL-----TGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK-------VIRH 230 (460)
T ss_pred ceeEEecCCCceeEEEEcccCeEEEee-----cchhheeeeeeecccCceEEEecCCCeeEEEechhhh-------hHHH
Confidence 345688899999999999999999888 6899999999999999999999999999999998621 1112
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
..+|-+.|.|++.+| .-..|++|+.|.+++|||+++...+..+.+|..+|.+|.+.|.+ -.+++||.|++|++||++.
T Consensus 231 YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~d-pqvit~S~D~tvrlWDl~a 308 (460)
T KOG0285|consen 231 YHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTD-PQVITGSHDSTVRLWDLRA 308 (460)
T ss_pred hccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCC-CceEEecCCceEEEeeecc
Confidence 346889999999999 68899999999999999999999999999999999999999844 5889999999999999998
Q ss_pred hhhhhccCceeeee-ecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEE
Q 002736 693 AILLLHLGVSIGTI-KTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAS 771 (886)
Q Consensus 693 ~~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs 771 (886)
++...++ .++..|.|++.+|. ...||+++.|. |+.|++..+.. +..+.+|+.-|++++..+..++++|+
T Consensus 309 -------gkt~~tlt~hkksvral~lhP~-e~~fASas~dn-ik~w~~p~g~f-~~nlsgh~~iintl~~nsD~v~~~G~ 378 (460)
T KOG0285|consen 309 -------GKTMITLTHHKKSVRALCLHPK-ENLFASASPDN-IKQWKLPEGEF-LQNLSGHNAIINTLSVNSDGVLVSGG 378 (460)
T ss_pred -------CceeEeeecccceeeEEecCCc-hhhhhccCCcc-ceeccCCccch-hhccccccceeeeeeeccCceEEEcC
Confidence 5544444 45778999999999 78899998875 89999998875 67799999999999998778999999
Q ss_pred CCCcEEEEeCCCCCccccCCCceEeec-----CCCceeEEEEecCCCEEEEEcCCCcEEEEecC
Q 002736 772 TDNTLKLWDLSMCTSRVIDTPLHSFTG-----HTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 830 (886)
Q Consensus 772 ~Dg~i~lwd~~~~~~~~~~~~~~~~~~-----h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~ 830 (886)
..|.|.+||.+++.. ++...+..+ -...|.+.+|...|..|++|..|.+|++|.-.
T Consensus 379 dng~~~fwdwksg~n---yQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 379 DNGSIMFWDWKSGHN---YQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred CceEEEEEecCcCcc---cccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 999999999998753 122222211 23458889999999999999999999999754
No 86
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=9e-31 Score=285.59 Aligned_cols=211 Identities=16% Similarity=0.215 Sum_probs=158.2
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
...+...+|++++..++ ++. ..+.++++|||.+++|.+++.+....+++.+++.++.||+.||.|||++||+||||
T Consensus 54 ~~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dl 129 (303)
T cd07869 54 ASLLKGLKHANIVLLHD-IIH---TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDL 129 (303)
T ss_pred HHHHhhCCCCCcCeEEE-EEe---cCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 34455668899888766 443 34578999999889999999766667899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+|++|||++........
T Consensus 130 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------- 158 (303)
T cd07869 130 KPQNLLISDTGELKLADFGLARAKSVPSH--------------------------------------------------- 158 (303)
T ss_pred CHHHEEECCCCCEEECCCCcceeccCCCc---------------------------------------------------
Confidence 99999999999999999999853211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~ 267 (886)
......||++|+|||++.+. .++.++|||||||++|||++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 199 (303)
T cd07869 159 ---------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQ 199 (303)
T ss_pred ---------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 00112678999999998764 48999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhcc---CC----------------------CChhh------hccChhhHHHHHHccCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRH---RV----------------------LPPQL------LLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~---~~----------------------~~~~~------~~~~~~~~~li~~~L~~dP~~R 313 (886)
||............+.. .. .+..+ ....+.+.+|+.+||++||.+|
T Consensus 200 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R 279 (303)
T cd07869 200 GVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNR 279 (303)
T ss_pred CCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhc
Confidence 77554332222111100 00 00000 0123467799999999999999
Q ss_pred CCHHHHhcCCCCCCCcCchH
Q 002736 314 PKMGELLQSEFLNEPRDSME 333 (886)
Q Consensus 314 ps~~eil~h~~~~~~~~~~~ 333 (886)
||+.|+++||||...+..+.
T Consensus 280 ~s~~~~l~h~~f~~~~~~~~ 299 (303)
T cd07869 280 LSAQAALSHEYFSDLPPRLW 299 (303)
T ss_pred cCHHHHhcCcccccCChhhh
Confidence 99999999999998655433
No 87
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=287.51 Aligned_cols=193 Identities=20% Similarity=0.276 Sum_probs=152.7
Q ss_pred cCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeecc
Q 002736 39 RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 117 (886)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~ 117 (886)
|.|+.+. ...--+++|||+|+.+.+|.++|+.+. ..|+...++.|+.||+.||.+||+.||||+|||||||||..
T Consensus 249 n~Vrm~d----~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 249 NIVRMLD----YFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD 324 (586)
T ss_pred eEEEeee----ccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence 4466555 444678999999999999999997653 56899999999999999999999999999999999999974
Q ss_pred C--CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCc
Q 002736 118 F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (886)
Q Consensus 118 ~--~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (886)
. ..||+||||++.....
T Consensus 325 ~~r~~vKVIDFGSSc~~~q------------------------------------------------------------- 343 (586)
T KOG0667|consen 325 PKRSRIKVIDFGSSCFESQ------------------------------------------------------------- 343 (586)
T ss_pred CCcCceeEEecccccccCC-------------------------------------------------------------
Confidence 4 3699999999843311
Q ss_pred ccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--CCCCCc
Q 002736 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGE 273 (886)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--pf~~~~ 273 (886)
....++.+..|+|||+|.|.+|+.+.||||||||++||++ |+++++
T Consensus 344 --------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 --------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred --------------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 1124577999999999999999999999999999999999 888887
Q ss_pred hhhHHhHhhccC------------------------------------------------------CCChhh-------h
Q 002736 274 EKTRTMSSLRHR------------------------------------------------------VLPPQL-------L 292 (886)
Q Consensus 274 ~~~~~~~~~~~~------------------------------------------------------~~~~~~-------~ 292 (886)
.....+..+.+- ..|+.. .
T Consensus 392 ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~ 471 (586)
T KOG0667|consen 392 NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLP 471 (586)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcc
Confidence 666554333210 000000 0
Q ss_pred -ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 293 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 293 -~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.....+.+|+.+||.+||.+|+|+.|+|+||||...
T Consensus 472 ~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 472 KADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred cccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 001234699999999999999999999999999853
No 88
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.5e-28 Score=268.77 Aligned_cols=290 Identities=21% Similarity=0.302 Sum_probs=247.6
Q ss_pred CcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCc
Q 002736 562 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 562 ~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~ 641 (886)
-.+.+|.+.|++++|+.|...+++|+ .+.|+||+..+. ..+..+.+. -+.|..|.| .+.++++|...|.
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~--------kciRTi~~~-y~l~~~Fvp-gd~~Iv~G~k~Ge 435 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTL--------KCIRTITCG-YILASKFVP-GDRYIVLGTKNGE 435 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCc--------ceeEEeccc-cEEEEEecC-CCceEEEeccCCc
Confidence 35678999999999999887777665 489999998763 333444444 788899998 6889999999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccC------ceeeeeecCCCeEEE
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLG------VSIGTIKTKANVCCV 715 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~------~~~~~~~~~~~v~~v 715 (886)
+.++|+.+...+.+++.|.+.||+++.+| ++..+++||.|.+|++||+.-...+.-.. ....++.....|.|+
T Consensus 436 l~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v 514 (888)
T KOG0306|consen 436 LQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCV 514 (888)
T ss_pred eEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEE
Confidence 99999999999999999999999999998 99999999999999999985421100001 112344557889999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCce
Q 002736 716 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLH 794 (886)
Q Consensus 716 ~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~ 794 (886)
.+||+ +++||+|--|++|++|-+.+.+- ..++.||.-+|.|+..+ |+.+++|||.|.+|++|-+.-+.| -+
T Consensus 515 ~~Spd-gk~LaVsLLdnTVkVyflDtlKF-flsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDC------HK 586 (888)
T KOG0306|consen 515 SVSPD-GKLLAVSLLDNTVKVYFLDTLKF-FLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDC------HK 586 (888)
T ss_pred EEcCC-CcEEEEEeccCeEEEEEecceee-eeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchh------hh
Confidence 99999 99999999999999999999885 67888999999999997 999999999999999999988854 68
Q ss_pred EeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEE
Q 002736 795 SFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 874 (886)
Q Consensus 795 ~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~ 874 (886)
++-+|...|.+|.|-|....+.++|.|+.|+-||-..-+.++. .++|..-|+|++.+|+|. +++++
T Consensus 587 S~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~-------------L~~H~~ev~cLav~~~G~-~vvs~ 652 (888)
T KOG0306|consen 587 SFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQK-------------LDGHHSEVWCLAVSPNGS-FVVSS 652 (888)
T ss_pred hhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhhee-------------eccchheeeeeEEcCCCC-eEEec
Confidence 8999999999999999999999999999999999776555533 356677799999999999 99999
Q ss_pred eCCCCEEEEEe
Q 002736 875 NSSGNIKILEM 885 (886)
Q Consensus 875 ~~dg~I~iw~l 885 (886)
+.|.+|++|+.
T Consensus 653 shD~sIRlwE~ 663 (888)
T KOG0306|consen 653 SHDKSIRLWER 663 (888)
T ss_pred cCCceeEeeec
Confidence 99999999974
No 89
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=5.9e-29 Score=266.56 Aligned_cols=239 Identities=21% Similarity=0.329 Sum_probs=219.2
Q ss_pred CCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhh
Q 002736 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (886)
Q Consensus 616 ~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~ 695 (886)
+...|.+|.++| ....++++-++|.|.|||.++...++.|.-..-+|.+..|-+ .-+++++|++|..|++++.++
T Consensus 12 rSdRVKsVd~HP-tePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt--- 86 (794)
T KOG0276|consen 12 RSDRVKSVDFHP-TEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNT--- 86 (794)
T ss_pred cCCceeeeecCC-CCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEeccc---
Confidence 667899999999 688888999999999999999999999988889999999986 789999999999999999999
Q ss_pred hhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEEEEC
Q 002736 696 LLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSAST 772 (886)
Q Consensus 696 ~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~ 772 (886)
...+..+. |...|.|++.+|. ..+++++|.|-+|++||..+.-.+.++|.||...|.+|+|. |.+.+||||-
T Consensus 87 ----~ekV~~FeAH~DyIR~iavHPt-~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sL 161 (794)
T KOG0276|consen 87 ----GEKVKTFEAHSDYIRSIAVHPT-LPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASL 161 (794)
T ss_pred ----ceeeEEeeccccceeeeeecCC-CCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeec
Confidence 67777776 4567999999999 78999999999999999998776789999999999999995 8899999999
Q ss_pred CCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCC--CEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCc
Q 002736 773 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD--GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPE 850 (886)
Q Consensus 773 Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g--~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 850 (886)
|++|++|.+.+. .|..++.||...|+||++-+-| .||++|+.|.+|+|||..+..++.++
T Consensus 162 DrTVKVWslgs~------~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL------------ 223 (794)
T KOG0276|consen 162 DRTVKVWSLGSP------HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL------------ 223 (794)
T ss_pred cccEEEEEcCCC------CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh------------
Confidence 999999999987 5689999999999999999876 49999999999999999998888544
Q ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 851 TDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 851 ~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
++|.+-|++++|+|.-+ .+++|+.||+++||.
T Consensus 224 -eGHt~Nvs~v~fhp~lp-iiisgsEDGTvriWh 255 (794)
T KOG0276|consen 224 -EGHTNNVSFVFFHPELP-IIISGSEDGTVRIWN 255 (794)
T ss_pred -hcccccceEEEecCCCc-EEEEecCCccEEEec
Confidence 56777899999999999 999999999999996
No 90
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-30 Score=273.02 Aligned_cols=199 Identities=18% Similarity=0.238 Sum_probs=163.2
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
..|+|++++|. |.. ....+|++.|+ +||+|++||-++...+++..+++||.||+.|+.|+|...||||||||+|+
T Consensus 74 VQHpNiVRLYE-ViD---TQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENV 149 (864)
T KOG4717|consen 74 VQHPNIVRLYE-VID---TQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENV 149 (864)
T ss_pred hcCcCeeeeee-hhc---ccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCccee
Confidence 46899999888 332 34568888999 88899999988888899999999999999999999999999999999998
Q ss_pred eec-cCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCc
Q 002736 114 VMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (886)
Q Consensus 114 ll~-~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (886)
++- .-|-||++|||++..+...
T Consensus 150 VFFEKlGlVKLTDFGFSNkf~PG--------------------------------------------------------- 172 (864)
T KOG4717|consen 150 VFFEKLGLVKLTDFGFSNKFQPG--------------------------------------------------------- 172 (864)
T ss_pred EEeeecCceEeeeccccccCCCc---------------------------------------------------------
Confidence 875 6799999999998543211
Q ss_pred cCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCC-cccccchHHHHHHHHhc---C
Q 002736 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLFELFC---P 268 (886)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDIwSlGvil~eLl~---p 268 (886)
.+.++.||+..|-|||++.|..|+ +++||||||||||.|+| |
T Consensus 173 ----------------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~P 218 (864)
T KOG4717|consen 173 ----------------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPP 218 (864)
T ss_pred ----------------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCc
Confidence 023445999999999999999985 58999999999999999 8
Q ss_pred CCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
|...++....-.++-....- +...+.++.+||..||..||.+|.+.++|..++|++....
T Consensus 219 FqeANDSETLTmImDCKYtv--PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 219 FQEANDSETLTMIMDCKYTV--PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred cccccchhhhhhhhcccccC--chhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 86666555544444333322 2344578999999999999999999999999999987543
No 91
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=2e-30 Score=284.02 Aligned_cols=203 Identities=16% Similarity=0.190 Sum_probs=160.2
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+.+.+|++++..++ ++. ..+.++++||| .|++|.+++.+. +.+++.+++.++.||+.||.|||++||+|||
T Consensus 44 ~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrD 118 (312)
T cd05585 44 RTVLAQVNCPFIVPLKF-SFQ---SPEKLYLVLAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRD 118 (312)
T ss_pred HHHHHhCCCCcEeceee-EEe---cCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 34455678999988766 443 34678999999 889999999654 5789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+|++|||+++.......
T Consensus 119 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------------- 148 (312)
T cd05585 119 LKPENILLDYQGHIALCDFGLCKLNMKDDD-------------------------------------------------- 148 (312)
T ss_pred CCHHHeEECCCCcEEEEECcccccCccCCC--------------------------------------------------
Confidence 999999999999999999999853211100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 149 ----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~t 188 (312)
T cd05585 149 ----------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLT 188 (312)
T ss_pred ----------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHh
Confidence 0112378999999999999889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC---CHHHHhcCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---s~~eil~h~~~~~~ 328 (886)
||............+.... ..+....+.+.+|+.+||.+||.+|| ++.|++.||||...
T Consensus 189 g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 189 GLPPFYDENVNEMYRKILQEPL--RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCCcCCCCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 7765544433333332221 22234567888999999999999997 58999999999864
No 92
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=1.6e-28 Score=249.95 Aligned_cols=287 Identities=20% Similarity=0.283 Sum_probs=232.5
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCC--CCeEEEecCCCcE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFEGVV 642 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~--~~~las~s~Dg~V 642 (886)
+-|.+.|.++... ++.++||++||.++|||... .......+|.++|.+++|...+ ...+++++.|.++
T Consensus 102 ~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G--------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl 171 (423)
T KOG0313|consen 102 FLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG--------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTL 171 (423)
T ss_pred ccchhhhhhhccc--CceEEEeecCCeeEEEecCC--------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceE
Confidence 4589999999988 78999999999999999875 2334556899999999995422 2369999999999
Q ss_pred EEEECCCceE----EEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhh------------------hhhccC
Q 002736 643 QVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI------------------LLLHLG 700 (886)
Q Consensus 643 ~iWd~~t~~~----~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~------------------~~~~~~ 700 (886)
++|..+.+.. +..-.+|.+.|-+|+..+ ++..+++||-|.+|+||+..+.. ....-+
T Consensus 172 ~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r 250 (423)
T KOG0313|consen 172 RLWKWNVGENKVKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTR 250 (423)
T ss_pred EEEEecCchhhhhHHhHhcccccceeEEEecC-CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccccc
Confidence 9999877643 233359999999999997 99999999999999999932210 000012
Q ss_pred ceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEE
Q 002736 701 VSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 778 (886)
Q Consensus 701 ~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~l 778 (886)
.++-++. |..+|.+|.|++. ..+.++|.|++|+.||+.+++. +.++.+ .++..++.++ ...+|++||.|..|++
T Consensus 251 ~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg~~-~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl 326 (423)
T KOG0313|consen 251 TPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETGGL-KSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRL 326 (423)
T ss_pred CceEEecccccceeeEEEcCC--CceEeecccceEEEEEeecccc-eeeeec-CcceeEeecccccceeeecCCCCceee
Confidence 2333333 5678999999984 5799999999999999999885 555554 4678999997 7889999999999999
Q ss_pred EeCCCCCccccCCCceEeecCCCceeEEEEecCCC-EEEEEcCCCcEEEEecCCCC-cceeeccCCCCCCCCCccccCCC
Q 002736 779 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPM-PALSFNFNHADPLSGPETDDAAQ 856 (886)
Q Consensus 779 wd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~lasgs~Dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 856 (886)
||-+++.. .-..++|.||++.|.+|.|+|... .+++||.||++++||+++.+ |+..+ .+|..
T Consensus 327 ~DPR~~~g---s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI-------------~~h~D 390 (423)
T KOG0313|consen 327 WDPRTGDG---SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI-------------AGHND 390 (423)
T ss_pred cCCCCCCC---ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee-------------ccCCc
Confidence 99998754 245688999999999999999876 68899999999999999877 66543 45678
Q ss_pred cEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 857 FISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 857 ~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
.|.++.|... . .+++||.|.+|+|+.
T Consensus 391 Kvl~vdW~~~-~-~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 391 KVLSVDWNEG-G-LIVSGGADNKLRIFK 416 (423)
T ss_pred eEEEEeccCC-c-eEEeccCcceEEEec
Confidence 8999999854 4 699999999999985
No 93
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=1.2e-29 Score=256.57 Aligned_cols=270 Identities=21% Similarity=0.309 Sum_probs=234.5
Q ss_pred ccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEE
Q 002736 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (886)
Q Consensus 534 ~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~ 613 (886)
+++++|..||-+++||+++..+.+++ ..|.+.|..|+++. +.++|+|.|++||.|.++.. |+..
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f-----~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~---------p~~t 143 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTF-----KAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGP---------PLHT 143 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhhee-----ecccCceeeEEecc--cceEEecCCcceeeeeccCC---------ccee
Confidence 46789999999999999998888777 57999999999998 78999999999999998751 5556
Q ss_pred ecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchh
Q 002736 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (886)
Q Consensus 614 ~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~ 693 (886)
+...+.+..|.-+. ..+.+|||+ -.|.|||.+...++..+.-....|.++.|+|.....|++|..|++|.|+|+++
T Consensus 144 ilg~s~~~gIdh~~-~~~~FaTcG--e~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~- 219 (433)
T KOG0268|consen 144 ILGKSVYLGIDHHR-KNSVFATCG--EQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQ- 219 (433)
T ss_pred eecccccccccccc-ccccccccC--ceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEeccc-
Confidence 66777777887765 467888887 56899999999999999888899999999999999999999999999999999
Q ss_pred hhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEEC
Q 002736 694 ILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAST 772 (886)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~ 772 (886)
..++..+...-.-+.|+|+|. +-.|++|+.|..++.||+|+...|+.+..+|..+|.+|.|+ .|+.++|||.
T Consensus 220 ------~~Pl~KVi~~mRTN~IswnPe-afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgsy 292 (433)
T KOG0268|consen 220 ------ASPLKKVILTMRTNTICWNPE-AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSY 292 (433)
T ss_pred ------CCccceeeeeccccceecCcc-ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccc
Confidence 777777776777789999995 88999999999999999999999999999999999999997 9999999999
Q ss_pred CCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcc
Q 002736 773 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 835 (886)
Q Consensus 773 Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~ 835 (886)
|.+|+||.++.+.++... + +.--..|.||.||-|.+||++||.|+.|++|.....+.+
T Consensus 293 DksIRIf~~~~~~SRdiY---h--tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 293 DKSIRIFPVNHGHSRDIY---H--TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred cceEEEeecCCCcchhhh---h--HhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 999999999988653211 1 112245899999999999999999999999987655443
No 94
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.1e-30 Score=250.92 Aligned_cols=201 Identities=17% Similarity=0.215 Sum_probs=166.7
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
+.-..+|.+|+|++++|+ . .-.....|+++|| .+|+|...|.. ...++++..+..|++|++.||.|+|.++|||
T Consensus 72 EiEIqs~L~hpnilrlY~-~---fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIh 147 (281)
T KOG0580|consen 72 EIEIQSHLRHPNILRLYG-Y---FHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIH 147 (281)
T ss_pred eeEeecccCCccHHhhhh-h---eeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCccc
Confidence 344568889999999998 2 3345678999999 88899998863 3467999999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+|+|++..|.+|++|||-+-....
T Consensus 148 RdiKpenlLlg~~~~lkiAdfGwsV~~p~--------------------------------------------------- 176 (281)
T KOG0580|consen 148 RDIKPENLLLGSAGELKIADFGWSVHAPS--------------------------------------------------- 176 (281)
T ss_pred CCCCHHHhccCCCCCeeccCCCceeecCC---------------------------------------------------
Confidence 99999999999999999999998722100
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
.+..+.+||.-|.+||.+.+..++.++|+|++||+.||+
T Consensus 177 -----------------------------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yef 215 (281)
T KOG0580|consen 177 -----------------------------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEF 215 (281)
T ss_pred -----------------------------------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHH
Confidence 023446999999999999999999999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhcc-CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
+. ||.+.. ...++..++. ....| ...+..++++|.+||.++|.+|.+..|++.|||+..
T Consensus 216 lvg~ppFes~~-~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 216 LVGLPPFESQS-HSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred HhcCCchhhhh-hHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 98 787666 4444444443 44333 456688899999999999999999999999999864
No 95
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96 E-value=2.1e-30 Score=280.55 Aligned_cols=202 Identities=16% Similarity=0.208 Sum_probs=153.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|+|++..++ +.. ..+.++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|||||
T Consensus 55 ~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk 130 (288)
T cd07871 55 SLLKNLKHANIVTLHD-IIH---TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLK 130 (288)
T ss_pred HHHHhCCCCCEeeEEE-EEc---CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 3455568888888776 333 345789999997789999997665668999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+|++|||+++.......
T Consensus 131 p~Nil~~~~~~~kl~DfG~~~~~~~~~~---------------------------------------------------- 158 (288)
T cd07871 131 PQNLLINEKGELKLADFGLARAKSVPTK---------------------------------------------------- 158 (288)
T ss_pred HHHEEECCCCCEEECcCcceeeccCCCc----------------------------------------------------
Confidence 9999999999999999999853211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~- 267 (886)
......|+++|+|||.+.+ ..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 200 (288)
T cd07871 159 --------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATG 200 (288)
T ss_pred --------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhC
Confidence 0011267899999999876 458999999999999999999
Q ss_pred --CCCCCchhhHHhHhhcc--C------------------CCCh--------hhhccChhhHHHHHHccCCCCCCCCCHH
Q 002736 268 --PFSTGEEKTRTMSSLRH--R------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~--~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
||............... . .++. ......+++.+||.+||.+||.+|||++
T Consensus 201 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~ 280 (288)
T cd07871 201 RPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAE 280 (288)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence 66544332222111100 0 0000 0112345678999999999999999999
Q ss_pred HHhcCCCC
Q 002736 318 ELLQSEFL 325 (886)
Q Consensus 318 eil~h~~~ 325 (886)
|+|+||||
T Consensus 281 ~~l~hp~f 288 (288)
T cd07871 281 AALRHSYF 288 (288)
T ss_pred HHhcCCCC
Confidence 99999997
No 96
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.96 E-value=3.2e-30 Score=279.46 Aligned_cols=199 Identities=16% Similarity=0.125 Sum_probs=158.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++.++. ++. ..+.++++||| .|++|.+++.+. +.+++..++.++.||+.||.|||++||+||||
T Consensus 53 ~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 127 (291)
T cd05612 53 RVLKEVSHPFIIRLFW-TEH---DQRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEIVYRDL 127 (291)
T ss_pred HHHHhCCCCcHhhhHh-hhc---cCCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3455668899988776 443 34678999998 889999999654 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+|++|||+++.....
T Consensus 128 kp~NIli~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------- 154 (291)
T cd05612 128 KPENILLDKEGHIKLTDFGFAKKLRDR----------------------------------------------------- 154 (291)
T ss_pred CHHHeEECCCCCEEEEecCcchhccCC-----------------------------------------------------
Confidence 999999999999999999998533110
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g 194 (291)
T cd05612 155 ----------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194 (291)
T ss_pred ----------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 001268999999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~ 328 (886)
||................. .......+.+.+|+.+||..||.+||+ +.++++||||...
T Consensus 195 ~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 195 YPPFFDDNPFGIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred CCCCCCCCHHHHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 7765544333333222222 122234577889999999999999995 9999999999864
No 97
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=5.4e-29 Score=246.51 Aligned_cols=295 Identities=16% Similarity=0.277 Sum_probs=233.3
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccC---------cccccccceE--EecCCCCeeeEEEeCCCCCe
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN---------ENRDIHYPVV--EMASRSKLSSICWNSYIKSQ 632 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~---------~~~~~~~~~~--~~~~~~~I~~l~~~~~~~~~ 632 (886)
+..|++++++.+|+|||.++|||+.|..|||+|++..+. ...+.+.|+. ...|...|+++.|+| ...+
T Consensus 108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP-re~I 186 (430)
T KOG0640|consen 108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP-RETI 186 (430)
T ss_pred EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc-hhhe
Confidence 456999999999999999999999999999999984221 1122233433 345899999999999 6899
Q ss_pred EEEecCCCcEEEEECCCceEEEEec--ccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCC
Q 002736 633 IASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKA 710 (886)
Q Consensus 633 las~s~Dg~V~iWd~~t~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~ 710 (886)
|+||+.|++|+++|+......+.++ ....+|.+++|+| .|.+|++|.+..+++|||+++.+.... ....-.+.+
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~Qcfvs---anPd~qht~ 262 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVS---ANPDDQHTG 262 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecC-CCceEEEecCCCceeEEeccceeEeee---cCccccccc
Confidence 9999999999999997654333332 2356899999999 999999999999999999998433211 112224578
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEE-ecCC-CCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCcc
Q 002736 711 NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTL-IGHN-KTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR 787 (886)
Q Consensus 711 ~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~-~~h~-~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~ 787 (886)
.|++|.+++. +++.++||.||.|++||--.+++ +.++ ..|. ..|.+..|. ++++++|.+.|.++++|.+.++
T Consensus 263 ai~~V~Ys~t-~~lYvTaSkDG~IklwDGVS~rC-v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~--- 337 (430)
T KOG0640|consen 263 AITQVRYSST-GSLYVTASKDGAIKLWDGVSNRC-VRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG--- 337 (430)
T ss_pred ceeEEEecCC-ccEEEEeccCCcEEeeccccHHH-HHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC---
Confidence 8999999999 99999999999999999877774 5554 3565 458888998 9999999999999999999998
Q ss_pred ccCCCceEeecCC-----CceeEEEEecCCCEEEEEcC-CCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEE
Q 002736 788 VIDTPLHSFTGHT-----NVKNFVGLSVWDGYVATGSE-TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSV 861 (886)
Q Consensus 788 ~~~~~~~~~~~h~-----~~v~~v~~sp~g~~lasgs~-Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 861 (886)
+++..+.|-. .--+...|+....|++.-.+ .+.++-||..+...+.-+. -+|++.|..+
T Consensus 338 ---R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s------------lgHn~a~R~i 402 (430)
T KOG0640|consen 338 ---RMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS------------LGHNGAVRWI 402 (430)
T ss_pred ---ceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc------------cCCCCCceEE
Confidence 4577776541 11233457777778777655 5889999999887664333 3577889999
Q ss_pred EEccCCCcEEEEEeCCCCEEEEE
Q 002736 862 CWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 862 ~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
..+|.++ .+++++.|-.+++|-
T Consensus 403 ~HSP~~p-~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 403 VHSPVEP-AFMTCSDDFRARFWY 424 (430)
T ss_pred EeCCCCC-ceeeecccceeeeee
Confidence 9999999 999999999999994
No 98
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.96 E-value=1.5e-29 Score=259.93 Aligned_cols=287 Identities=19% Similarity=0.284 Sum_probs=236.0
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~i 644 (886)
-.|.+.|..+.|-++...|+|||.|..|++|+......+ .+ ....+..+.|+.+.|.+ ++.+++++++|+.+++
T Consensus 172 d~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~---~~--~tLaGs~g~it~~d~d~-~~~~~iAas~d~~~r~ 245 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSE---LI--STLAGSLGNITSIDFDS-DNKHVIAASNDKNLRL 245 (459)
T ss_pred hccccccceeEEccCcchhhhcchhhhhhhhhcccchhh---hh--hhhhccCCCcceeeecC-CCceEEeecCCCceee
Confidence 358889999999999999999999999999998653211 11 12234667899999998 5778888888999999
Q ss_pred EECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcE
Q 002736 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRS 724 (886)
Q Consensus 645 Wd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 724 (886)
|++...+...++.+|.+.|+++.|.. ....+++|+.|.+||+||+.. ..+..++-....+..|..+ ...
T Consensus 246 Wnvd~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k-------~~C~kt~l~~S~cnDI~~~---~~~ 314 (459)
T KOG0288|consen 246 WNVDSLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQK-------AYCSKTVLPGSQCNDIVCS---ISD 314 (459)
T ss_pred eeccchhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhh-------hheeccccccccccceEec---cee
Confidence 99999999999999999999999985 555599999999999999998 5666666556667777776 347
Q ss_pred EEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCce
Q 002736 725 LAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 803 (886)
Q Consensus 725 l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v 803 (886)
+++|..|++|++||+|.... ......+. .|+++..+ ++..|.+++.|.++.+.|+++..............+|. .
T Consensus 315 ~~SgH~DkkvRfwD~Rs~~~-~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asD--w 390 (459)
T KOG0288|consen 315 VISGHFDKKVRFWDIRSADK-TRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASD--W 390 (459)
T ss_pred eeecccccceEEEeccCCce-eeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccc--c
Confidence 99999999999999999884 77777765 89999997 99999999999999999999875422222222233443 7
Q ss_pred eEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEE
Q 002736 804 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 883 (886)
Q Consensus 804 ~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw 883 (886)
+.+.|||++.|+|+||.||.|+||++.+++..........+ ..|+++.|+|.|. .|++++.++.+.+|
T Consensus 391 trvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~-----------~aI~s~~W~~sG~-~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 391 TRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN-----------AAITSLSWNPSGS-GLLSADKQKAVTLW 458 (459)
T ss_pred ceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCC-----------cceEEEEEcCCCc-hhhcccCCcceEec
Confidence 88999999999999999999999999999887666543322 2599999999999 99999999999999
Q ss_pred E
Q 002736 884 E 884 (886)
Q Consensus 884 ~ 884 (886)
.
T Consensus 459 ~ 459 (459)
T KOG0288|consen 459 T 459 (459)
T ss_pred C
Confidence 4
No 99
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96 E-value=4.1e-30 Score=284.25 Aligned_cols=199 Identities=15% Similarity=0.111 Sum_probs=159.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++.+++ ++. ..+.++++||| .|++|.++|.+. ..+++..+..++.||+.||.|||++||+||||
T Consensus 83 ~~l~~l~hp~Iv~~~~-~~~---~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL 157 (340)
T PTZ00426 83 KILNYINHPFCVNLYG-SFK---DESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDL 157 (340)
T ss_pred HHHHhCCCCCCcceEE-EEE---eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCC
Confidence 3445567999998777 443 34678999999 789999999654 56899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+|++|||+++.....
T Consensus 158 kp~NILl~~~~~ikL~DFG~a~~~~~~----------------------------------------------------- 184 (340)
T PTZ00426 158 KPENLLLDKDGFIKMTDFGFAKVVDTR----------------------------------------------------- 184 (340)
T ss_pred CHHHEEECCCCCEEEecCCCCeecCCC-----------------------------------------------------
Confidence 999999999999999999998532110
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 185 ----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G 224 (340)
T PTZ00426 185 ----------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG 224 (340)
T ss_pred ----------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcC
Confidence 011378999999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||................... +....+.+.+++.+||..||.+|+ +++++++||||...
T Consensus 225 ~~Pf~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 225 CPPFYANEPLLIYQKILEGIIYF--PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 776554433333332222221 223457788999999999999995 89999999999864
No 100
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96 E-value=4.5e-30 Score=283.25 Aligned_cols=199 Identities=16% Similarity=0.164 Sum_probs=159.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++.+++ ++. ..+.+|++||| .|++|.++|.+. ..+++..++.++.||+.||.|||++||+||||
T Consensus 70 ~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dl 144 (329)
T PTZ00263 70 SILMELSHPFIVNMMC-SFQ---DENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDL 144 (329)
T ss_pred HHHHhCCCCCCCcEEE-EEE---cCCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3455678999998877 443 34678999998 889999999654 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+||+|||++......
T Consensus 145 kp~NIll~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------- 171 (329)
T PTZ00263 145 KPENLLLDNKGHVKVTDFGFAKKVPDR----------------------------------------------------- 171 (329)
T ss_pred CHHHEEECCCCCEEEeeccCceEcCCC-----------------------------------------------------
Confidence 999999999999999999998432110
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 172 ----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg 211 (329)
T PTZ00263 172 ----------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG 211 (329)
T ss_pred ----------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcC
Confidence 011368999999999999889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~ 328 (886)
||...... ..+..+..... +.+....+.+.+||.+||..||.+||+ +.+++.||||...
T Consensus 212 ~~pf~~~~~~-~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 212 YPPFFDDTPF-RIYEKILAGRL-KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred CCCCCCCCHH-HHHHHHhcCCc-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 77654433 33333333322 122234567889999999999999987 7999999999863
No 101
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96 E-value=4.2e-30 Score=283.23 Aligned_cols=202 Identities=19% Similarity=0.222 Sum_probs=158.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ ++. ..+.++++||| .|++|.+++... +.+++.+++.++.||+.||.|||++||+||||
T Consensus 47 ~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi 121 (328)
T cd05593 47 RVLKNTRHPFLTSLKY-SFQ---TKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL 121 (328)
T ss_pred HHHHhCCCCCCcceEE-EEE---cCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence 3455667888887665 332 35678999999 889999998554 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+||+|||+++.......
T Consensus 122 kp~NIll~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------- 150 (328)
T cd05593 122 KLENLMLDKDGHIKITDFGLCKEGITDAA--------------------------------------------------- 150 (328)
T ss_pred CHHHeEECCCCcEEEecCcCCccCCCccc---------------------------------------------------
Confidence 99999999999999999999853211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....+||+.|+|||.+.+..++.++|||||||+||||++
T Consensus 151 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 191 (328)
T cd05593 151 ---------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191 (328)
T ss_pred ---------------------------------------ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhC
Confidence 0111378999999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||................. ..+....+++.+|+.+||.+||.+|+ ++.|+++||||...
T Consensus 192 ~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 192 RLPFYNQDHEKLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCCCCCHHHHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 7755443332222222211 22234567889999999999999997 89999999999864
No 102
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=6e-30 Score=281.11 Aligned_cols=197 Identities=18% Similarity=0.256 Sum_probs=156.4
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
.+|++++..++ ++. ..+.+|++||| .|++|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+||
T Consensus 53 ~~h~~iv~~~~-~~~---~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NI 127 (320)
T cd05590 53 RNHPFLTQLYC-CFQ---TPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNV 127 (320)
T ss_pred cCCCchhceee-EEE---cCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHe
Confidence 36888888776 332 34678999999 789999999654 5789999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.++.+||+|||+++.......
T Consensus 128 li~~~~~~kL~DfG~~~~~~~~~~-------------------------------------------------------- 151 (320)
T cd05590 128 LLDHEGHCKLADFGMCKEGIFNGK-------------------------------------------------------- 151 (320)
T ss_pred EECCCCcEEEeeCCCCeecCcCCC--------------------------------------------------------
Confidence 999999999999999853211000
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
......||+.|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 152 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (320)
T cd05590 152 ----------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFE 197 (320)
T ss_pred ----------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 0112378999999999998889999999999999999999 776
Q ss_pred CCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH------HHHhcCCCCCCC
Q 002736 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 328 (886)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~------~eil~h~~~~~~ 328 (886)
.................. +...++.+.+|+.+||+.||.+||++ +++++||||...
T Consensus 198 ~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 198 AENEDDLFEAILNDEVVY--PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 554443333332222222 22356778899999999999999998 899999999864
No 103
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96 E-value=6.2e-30 Score=281.36 Aligned_cols=202 Identities=19% Similarity=0.241 Sum_probs=159.4
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ ++. ..+.+|++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||
T Consensus 47 ~~l~~l~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl 121 (323)
T cd05595 47 RVLQNTRHPFLTALKY-AFQ---THDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121 (323)
T ss_pred HHHHhCCCCCCcceee-EEe---cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 3455567888887766 333 34678999999 889999998554 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+||+|||+++.......
T Consensus 122 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------------- 150 (323)
T cd05595 122 KLENLMLDKDGHIKITDFGLCKEGISDGA--------------------------------------------------- 150 (323)
T ss_pred CHHHEEEcCCCCEEecccHHhccccCCCC---------------------------------------------------
Confidence 99999999999999999999853211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......||+.|+|||.+.+..++.++|||||||+||||++
T Consensus 151 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g 191 (323)
T cd05595 151 ---------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 191 (323)
T ss_pred ---------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhC
Confidence 0011368999999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||.................. .+...++.+.+||.+||..||.+|| ++.++++|+||...
T Consensus 192 ~~Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 192 RLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 77655443333322222221 2234567889999999999999998 89999999999874
No 104
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-30 Score=275.77 Aligned_cols=209 Identities=19% Similarity=0.240 Sum_probs=161.1
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
+.-.|+.-+||+++++++ .+..+ +.+.|+.|| .||-....|-.-++.|++.++..+++|+++||+|||+++||||
T Consensus 79 EIeILa~CdHP~ivkLl~-ayy~e---nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHR 154 (1187)
T KOG0579|consen 79 EIEILAECDHPVIVKLLS-AYYFE---NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHR 154 (1187)
T ss_pred hhhhhhcCCChHHHHHHH-HHhcc---CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhh
Confidence 344566667999999998 44432 344555555 6677777776667889999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
|||..|||++-+|.|+++|||++...... .
T Consensus 155 DLKAGNiL~TldGdirLADFGVSAKn~~t--------------------------~------------------------ 184 (1187)
T KOG0579|consen 155 DLKAGNILLTLDGDIRLADFGVSAKNKST--------------------------R------------------------ 184 (1187)
T ss_pred hccccceEEEecCcEeeecccccccchhH--------------------------H------------------------
Confidence 99999999999999999999997322110 0
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvi 261 (886)
. +...++|||+|||||++. ..+|++++||||||++
T Consensus 185 ---------------------------------q-------kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT 224 (1187)
T KOG0579|consen 185 ---------------------------------Q-------KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT 224 (1187)
T ss_pred ---------------------------------h-------hhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence 0 112249999999999874 5679999999999999
Q ss_pred HHHHhc--CCCCCchhhHHhHhhccCCCCh--hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 262 LFELFC--PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 262 l~eLl~--pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
|.||.- |....-...+++-.+.....|. .+...+..+.+|+.+||.+||..||++.++|+|||+...+.
T Consensus 225 LIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 225 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999998 6655555555554444433322 12223456789999999999999999999999999997543
No 105
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.8e-28 Score=257.56 Aligned_cols=280 Identities=22% Similarity=0.288 Sum_probs=232.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd 646 (886)
-.+.|.+++|+|...+=++......+.||+..+..... ....-+..|.+++|-. +|.++|.|+..|.|+|+|
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k-------~~srFk~~v~s~~fR~-DG~LlaaGD~sG~V~vfD 96 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRK-------TFSRFKDVVYSVDFRS-DGRLLAAGDESGHVKVFD 96 (487)
T ss_pred ccCcceeEecCCCCCCceEEecccEEEEEecchhhhhh-------hHHhhccceeEEEeec-CCeEEEccCCcCcEEEec
Confidence 35689999999955433333334689999876531111 1122456788999987 799999999999999999
Q ss_pred CCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeee-ecCCCeEEEEEeCCCCcEE
Q 002736 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTI-KTKANVCCVQFPLDSGRSL 725 (886)
Q Consensus 647 ~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~l 725 (886)
..+...++.+.+|+.+|..+.|+|.+..+|++|++|+.+++||+.+ ...+..+ .|...|.|.+|+|.+++++
T Consensus 97 ~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~-------a~v~~~l~~htDYVR~g~~~~~~~hiv 169 (487)
T KOG0310|consen 97 MKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST-------AYVQAELSGHTDYVRCGDISPANDHIV 169 (487)
T ss_pred cccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC-------cEEEEEecCCcceeEeeccccCCCeEE
Confidence 8887788999999999999999999999999999999999999998 3333333 3567899999999988999
Q ss_pred EEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCcee
Q 002736 726 AFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 804 (886)
Q Consensus 726 ~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~ 804 (886)
++||+||+|++||+|....++..+ .|..+|..|.|. +|..++||+. +.+++||+-++. +.+..+..|...|+
T Consensus 170 vtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~-----qll~~~~~H~KtVT 242 (487)
T KOG0310|consen 170 VTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGG-----QLLTSMFNHNKTVT 242 (487)
T ss_pred EecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCc-----eehhhhhcccceEE
Confidence 999999999999999886445555 699999999996 7789998875 689999999764 44555566999999
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEE
Q 002736 805 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 883 (886)
Q Consensus 805 ~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw 883 (886)
|+++..++..|++||-|+.|++||+.+-+.+.++++. ++|.+++.+|++. .++.|-+||.+-+-
T Consensus 243 cL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~--------------~pvLsiavs~dd~-t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 243 CLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYP--------------GPVLSIAVSPDDQ-TVVIGMSNGLVSIR 306 (487)
T ss_pred EEEeecCCceEeecccccceEEEEccceEEEEeeecc--------------cceeeEEecCCCc-eEEEecccceeeee
Confidence 9999999999999999999999999988888887763 3599999999999 99999999988764
No 106
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.96 E-value=3.2e-30 Score=285.84 Aligned_cols=213 Identities=14% Similarity=0.172 Sum_probs=157.4
Q ss_pred ceeecccccccCCCCCCcccccc--ccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 29 GVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
...+...+|++++..++ ++... .....+|++|||.+++|.+++.+. ..+++..++.++.||+.||.|||++||+||
T Consensus 50 ~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 127 (338)
T cd07859 50 IKLLRLLRHPDIVEIKH-IMLPPSRREFKDIYVVFELMESDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTANVFHR 127 (338)
T ss_pred HHHHHhCCCCCEeeecc-eEeccCCCCCceEEEEEecCCCCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 34455678999888776 44322 223458999999989999999654 568999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+|||++.++.+||+|||+++........
T Consensus 128 dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------------------------------------------ 159 (338)
T cd07859 128 DLKPKNILANADCKLKICDFGLARVAFNDTPT------------------------------------------------ 159 (338)
T ss_pred CCCHHHeEECCCCcEEEccCccccccccccCc------------------------------------------------
Confidence 99999999999999999999998543211000
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC--CCCCcccccchHHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFE 264 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDIwSlGvil~e 264 (886)
.......+||++|+|||++.+ ..++.++|||||||++||
T Consensus 160 ---------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~e 200 (338)
T cd07859 160 ---------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 200 (338)
T ss_pred ---------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHH
Confidence 000112378999999999876 568999999999999999
Q ss_pred Hhc---CCCCCchhhHH--hH------------------------hhccCC---CChhhhccChhhHHHHHHccCCCCCC
Q 002736 265 LFC---PFSTGEEKTRT--MS------------------------SLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSG 312 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~--~~------------------------~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (886)
|++ ||......... +. .+.... +...+....+.+.+++.+||..||.+
T Consensus 201 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 280 (338)
T cd07859 201 VLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKD 280 (338)
T ss_pred HHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCccc
Confidence 999 56433221110 00 000000 01112234567789999999999999
Q ss_pred CCCHHHHhcCCCCCCCcC
Q 002736 313 RPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 313 Rps~~eil~h~~~~~~~~ 330 (886)
||+++|+++||||+....
T Consensus 281 Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 281 RPTAEEALADPYFKGLAK 298 (338)
T ss_pred CCCHHHHhcCchhhhcCc
Confidence 999999999999987544
No 107
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=3.4e-27 Score=251.75 Aligned_cols=265 Identities=28% Similarity=0.418 Sum_probs=225.9
Q ss_pred cccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEe
Q 002736 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (886)
Q Consensus 535 ~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~ 614 (886)
..+.+..+|.+++|++.+.+....+ ..|...+.++.|+|+++++++++.++.|++|++... .......
T Consensus 23 ~l~~~~~~g~i~i~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~-------~~~~~~~ 90 (289)
T cd00200 23 LLATGSGDGTIKVWDLETGELLRTL-----KGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG-------ECVRTLT 90 (289)
T ss_pred EEEEeecCcEEEEEEeeCCCcEEEE-----ecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc-------cceEEEe
Confidence 3456667999999999988765554 468889999999999999999999999999999753 1111223
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhh
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~ 694 (886)
.|...|.++.|++. +.++++++.||.|.+||+.+++....+..|...+.++.|+| ++.++++++.||.|++||+++
T Consensus 91 ~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~-- 166 (289)
T cd00200 91 GHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP-DGTFVASSSQDGTIKLWDLRT-- 166 (289)
T ss_pred ccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-cCCEEEEEcCCCcEEEEEccc--
Confidence 56778999999984 78888888899999999999999889989999999999998 688888888899999999987
Q ss_pred hhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEEC
Q 002736 695 LLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAST 772 (886)
Q Consensus 695 ~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~ 772 (886)
+..+..+.. ...+.+++|+|+ +..+++++.|+.|++||++..+ ++..+..|...+.+++|+ ++.++++++.
T Consensus 167 -----~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 239 (289)
T cd00200 167 -----GKCVATLTGHTGEVNSVAFSPD-GEKLLSSSSDGTIKLWDLSTGK-CLGTLRGHENGVNSVAFSPDGYLLASGSE 239 (289)
T ss_pred -----cccceeEecCccccceEEECCC-cCEEEEecCCCcEEEEECCCCc-eecchhhcCCceEEEEEcCCCcEEEEEcC
Confidence 444445444 447999999999 7788888889999999999876 477777899999999997 6778888888
Q ss_pred CCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEe
Q 002736 773 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 828 (886)
Q Consensus 773 Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd 828 (886)
||.|++||+.+. .++..+.+|...+.+++|+|++.++++++.|+.|++|+
T Consensus 240 ~~~i~i~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 240 DGTIRVWDLRTG------ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCcEEEEEcCCc------eeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 999999999876 45777889999999999999999999999999999996
No 108
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.4e-30 Score=289.76 Aligned_cols=210 Identities=16% Similarity=0.115 Sum_probs=157.3
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
+...+.+.+|+|++.+++ ++. .....+++||+.+++|.+++... +.+++.+++.|++||+.||.|||++||||||
T Consensus 133 E~~il~~l~HpnIv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD 207 (391)
T PHA03212 133 EAHILRAINHPSIIQLKG-TFT---YNKFTCLILPRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRD 207 (391)
T ss_pred HHHHHHhCCCCCCCCEeE-EEE---ECCeeEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 344566778999998776 433 34678899999888999998554 5689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++..+.+||+|||++........
T Consensus 208 iKP~NIll~~~~~vkL~DFG~a~~~~~~~~-------------------------------------------------- 237 (391)
T PHA03212 208 IKAENIFINHPGDVCLGDFGAACFPVDINA-------------------------------------------------- 237 (391)
T ss_pred CChHhEEEcCCCCEEEEeCCcccccccccc--------------------------------------------------
Confidence 999999999999999999999843211000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 238 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 278 (391)
T PHA03212 238 ---------------------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMAT 278 (391)
T ss_pred ---------------------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 00112378999999999999889999999999999999998
Q ss_pred ---CCCCCch------hhHHhHhhc--------------------------cC-C-C------ChhhhccChhhHHHHHH
Q 002736 268 ---PFSTGEE------KTRTMSSLR--------------------------HR-V-L------PPQLLLKFPKEASFCLW 304 (886)
Q Consensus 268 ---pf~~~~~------~~~~~~~~~--------------------------~~-~-~------~~~~~~~~~~~~~li~~ 304 (886)
||+.... ....+..+. .. . . .......+.++.+||.+
T Consensus 279 g~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~ 358 (391)
T PHA03212 279 CHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICK 358 (391)
T ss_pred CCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHH
Confidence 5543221 000000000 00 0 0 00111234467799999
Q ss_pred ccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 305 LLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 305 ~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
||.+||.+|||+.|+|+||||.....+
T Consensus 359 mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 359 MLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HhcCChhhCCCHHHHhcChhhccCCCC
Confidence 999999999999999999999876543
No 109
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.96 E-value=6e-28 Score=235.18 Aligned_cols=300 Identities=17% Similarity=0.205 Sum_probs=238.3
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+.+|..+++-|.++.+|++|++|+.|..+.||-...+ ...-...+|.+.|+|+..+- +...+++|+.|.+++
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nG-------erlGty~GHtGavW~~Did~-~s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNG-------ERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAK 77 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecCC-------ceeeeecCCCceEEEEEecC-CcceeeeccccceeE
Confidence 4679999999999999999999999999999965321 11224568999999999886 578999999999999
Q ss_pred EEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCC-----CcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEE
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD-----GSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQF 717 (886)
Q Consensus 644 iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-----g~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~ 717 (886)
+||+++|+++..++ ...+|..+.|++ ++++++.+.++ +.|.++|++..........+...+.. ...++.+-|
T Consensus 78 LWDv~tGk~la~~k-~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 78 LWDVETGKQLATWK-TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred EEEcCCCcEEEEee-cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 99999999999886 578899999997 88888877654 67999999864322222455555554 456999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEe
Q 002736 718 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 796 (886)
Q Consensus 718 sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~ 796 (886)
.|- +..|++|..||.|..||++++...+.....|...|+.+.++ +..+++|||.|.+-++||+.+.. .++++
T Consensus 156 g~l-~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~------v~Kty 228 (327)
T KOG0643|consen 156 GPL-GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE------VLKTY 228 (327)
T ss_pred ccc-CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecccee------eEEEe
Confidence 999 89999999999999999999987778888899999999998 99999999999999999999873 46666
Q ss_pred ecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCC---CccccCCCcEEEEEEccCCCcEEEE
Q 002736 797 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSG---PETDDAAQFISSVCWRGQSSNTLVA 873 (886)
Q Consensus 797 ~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~V~~v~~s~~~~~~l~s 873 (886)
. ...+|++.+++|...+++.|+.....-|=-.....-...-+|-+. +.. ....+|=++|++|+|+|+|. ..++
T Consensus 229 ~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~--i~eEEigrvkGHFGPINsvAfhPdGk-sYsS 304 (327)
T KOG0643|consen 229 T-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHL--IFEEEIGRVKGHFGPINSVAFHPDGK-SYSS 304 (327)
T ss_pred e-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHH--HHHHHhccccccccCcceeEECCCCc-cccc
Confidence 6 356899999999999888888655443332222111111111110 000 12367889999999999999 9999
Q ss_pred EeCCCCEEEEE
Q 002736 874 ANSSGNIKILE 884 (886)
Q Consensus 874 ~~~dg~I~iw~ 884 (886)
|+.||.|++.-
T Consensus 305 GGEDG~VR~h~ 315 (327)
T KOG0643|consen 305 GGEDGYVRLHH 315 (327)
T ss_pred CCCCceEEEEE
Confidence 99999999863
No 110
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=9.8e-30 Score=275.25 Aligned_cols=203 Identities=20% Similarity=0.263 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccc--ccCCceEEEEeeCCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 31 ELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
.+.+.+|+|++..++ ++.+. .....++++||+.+++|.+++.+. ...+++.+++.++.||+.||.|||++||+|||
T Consensus 55 ~l~~~~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 133 (288)
T cd07863 55 RLEAFDHPNIVRLMD-VCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 133 (288)
T ss_pred HhhhcCCCCeeeeee-eeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 344568999888776 44432 234568899999778999998553 24589999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+|++|||++.......
T Consensus 134 ikp~Nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------- 162 (288)
T cd07863 134 LKPENILVTSGGQVKLADFGLARIYSCQM--------------------------------------------------- 162 (288)
T ss_pred CCHHHEEECCCCCEEECccCccccccCcc---------------------------------------------------
Confidence 99999999999999999999985432110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......||..|+|||++.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 202 (288)
T cd07863 163 ----------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 202 (288)
T ss_pred ----------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh
Confidence 0011267889999999998889999999999999999998
Q ss_pred --CCCCCchhhHHhHhhcc------------------CCCC--------hhhhccChhhHHHHHHccCCCCCCCCCHHHH
Q 002736 268 --PFSTGEEKTRTMSSLRH------------------RVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 319 (886)
|++........+..+.. ..+. .........+.+|+.+||++||.+|||+.|+
T Consensus 203 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~ 282 (288)
T cd07863 203 RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA 282 (288)
T ss_pred CCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH
Confidence 44333322222211110 0000 0112234556799999999999999999999
Q ss_pred hcCCCC
Q 002736 320 LQSEFL 325 (886)
Q Consensus 320 l~h~~~ 325 (886)
+.||||
T Consensus 283 l~hp~f 288 (288)
T cd07863 283 LQHPFF 288 (288)
T ss_pred hcCCCC
Confidence 999997
No 111
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=4.9e-29 Score=247.60 Aligned_cols=288 Identities=16% Similarity=0.231 Sum_probs=240.5
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccC-cccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~-~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
++.++.+-|..|+|||+++++|++||-|-||++.++.. ......-....|-+...|.|++|+. +..++|+|+.||.|+
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSR-DsEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSR-DSEMLASGSQDGKIK 288 (508)
T ss_pred cccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecc-cHHHhhccCcCCcEE
Confidence 45677889999999999999999999999999976421 1122222345677899999999998 789999999999999
Q ss_pred EEECCCceEEEEec-ccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCC
Q 002736 644 VWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDS 721 (886)
Q Consensus 644 iWd~~t~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~ 721 (886)
+|.+++|++++.|. .|.+.|+|+.|+. ++..+++++.|.+++|.-+.+ ++.+..+++ .+.|+.+.|.++
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKS-------GK~LKEfrGHsSyvn~a~ft~d- 359 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKS-------GKCLKEFRGHSSYVNEATFTDD- 359 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEecccc-------chhHHHhcCccccccceEEcCC-
Confidence 99999999999997 7999999999997 899999999999999999999 777777765 456999999999
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEe--cCCCCeEEEEe-c-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEee
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLI--GHNKTVSYVKF-V-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT 797 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~--~h~~~V~~v~f-~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~ 797 (886)
|+.++++|.||+|++|+..+..+ +.+|+ +...+|++|-. + +...++.+...++|.+.++.. +.+++|.
T Consensus 360 G~~iisaSsDgtvkvW~~KtteC-~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-------QvVrsfs 431 (508)
T KOG0275|consen 360 GHHIISASSDGTVKVWHGKTTEC-LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-------QVVRSFS 431 (508)
T ss_pred CCeEEEecCCccEEEecCcchhh-hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-------eEEeeec
Confidence 99999999999999999998874 77765 34566777766 4 778999999999999998864 3466665
Q ss_pred cCC---CceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEE
Q 002736 798 GHT---NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 874 (886)
Q Consensus 798 ~h~---~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~ 874 (886)
... +.-.+.++||.|.++.|.++|+.++.|.+.+++.-..+.. |..-|..++.+|..+ .||+=
T Consensus 432 SGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V-------------hEkdvIGl~HHPHqN-llAsY 497 (508)
T KOG0275|consen 432 SGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV-------------HEKDVIGLTHHPHQN-LLASY 497 (508)
T ss_pred cCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeec-------------ccccccccccCcccc-hhhhh
Confidence 432 2344567999999999999999999999998876554432 334488999999999 99999
Q ss_pred eCCCCEEEEE
Q 002736 875 NSSGNIKILE 884 (886)
Q Consensus 875 ~~dg~I~iw~ 884 (886)
+.||.+++|.
T Consensus 498 sEDgllKLWk 507 (508)
T KOG0275|consen 498 SEDGLLKLWK 507 (508)
T ss_pred cccchhhhcC
Confidence 9999999995
No 112
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96 E-value=1e-29 Score=274.70 Aligned_cols=206 Identities=14% Similarity=0.144 Sum_probs=157.1
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
...+.+.+|++++..+. ++. ..+.++++||| .|++|.+++... ...+++..++.++.||+.||.|||++||+||
T Consensus 51 ~~il~~l~~~~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~ 126 (285)
T cd05631 51 KRILEKVNSRFVVSLAY-AYE---TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYR 126 (285)
T ss_pred HHHHHhcCCCcEEEEEE-EEc---cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 34555667888877665 333 34578899998 789999887432 3468999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+|||++.++.+|++|||++.......
T Consensus 127 dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------- 156 (285)
T cd05631 127 DLKPENILLDDRGHIRISDLGLAVQIPEGE-------------------------------------------------- 156 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCcEEcCCCC--------------------------------------------------
Confidence 999999999999999999999984321100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
.....+||+.|+|||.+.+..++.++|||||||+||||+
T Consensus 157 -----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 195 (285)
T cd05631 157 -----------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI 195 (285)
T ss_pred -----------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHH
Confidence 001126899999999999988999999999999999999
Q ss_pred c---CCCCCchhhH--HhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCCc
Q 002736 267 C---PFSTGEEKTR--TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (886)
Q Consensus 267 ~---pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~ 329 (886)
+ ||........ .................++.+.+|+.+||..||.+||+ ++++++||||....
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 196 QGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred hCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 9 7765433211 11111111112223345678889999999999999987 89999999998754
No 113
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.96 E-value=1.3e-29 Score=274.22 Aligned_cols=203 Identities=18% Similarity=0.200 Sum_probs=150.8
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++.+++ ++. ..+.++++|||..+++.+.+......+++..++.++.||+.||.|||++||+|||||
T Consensus 52 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk 127 (287)
T cd07848 52 KMLRTLKQENIVELKE-AFR---RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK 127 (287)
T ss_pred HHHHhCCCccccchhh-hEe---cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 3455668888888776 443 346789999995555555554444578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+||+|||++.........
T Consensus 128 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------------- 156 (287)
T cd07848 128 PENLLISHNDVLKLCDFGFARNLSEGSNA--------------------------------------------------- 156 (287)
T ss_pred HHHEEEcCCCcEEEeeccCcccccccccc---------------------------------------------------
Confidence 99999999999999999998543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 198 (287)
T cd07848 157 --------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198 (287)
T ss_pred --------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCC
Confidence 0011368999999999998889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhc--cC------------------CCCh----------hhhccChhhHHHHHHccCCCCCCCCCH
Q 002736 268 -PFSTGEEKTRTMSSLR--HR------------------VLPP----------QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~--~~------------------~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
||.............. .. ..+. .....++.+.+|+.+||++||++|||+
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~ 278 (287)
T cd07848 199 PLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT 278 (287)
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence 6654332221111000 00 0000 001134567899999999999999999
Q ss_pred HHHhcCCCC
Q 002736 317 GELLQSEFL 325 (886)
Q Consensus 317 ~eil~h~~~ 325 (886)
+|+|+||||
T Consensus 279 ~~~l~hp~f 287 (287)
T cd07848 279 EQCLNHPAF 287 (287)
T ss_pred HHHhcCCCC
Confidence 999999997
No 114
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=1.4e-29 Score=278.37 Aligned_cols=196 Identities=18% Similarity=0.253 Sum_probs=156.1
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++.+++ ++. ..+.+|++||| .|++|..++.+. +.+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 54 ~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nil 128 (321)
T cd05591 54 KHPFLTALHC-CFQ---TKDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNIL 128 (321)
T ss_pred CCCCccceee-EEE---cCCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 6788877666 333 34678999999 789999998654 57899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||++........
T Consensus 129 l~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------------------- 151 (321)
T cd05591 129 LDAEGHCKLADFGMCKEGILNGV--------------------------------------------------------- 151 (321)
T ss_pred ECCCCCEEEeecccceecccCCc---------------------------------------------------------
Confidence 99999999999999853211100
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
......||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~ 198 (321)
T cd05591 152 ---------------------------------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA 198 (321)
T ss_pred ---------------------------------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC
Confidence 0111368999999999998889999999999999999999 7765
Q ss_pred CchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-------CHHHHhcCCCCCCC
Q 002736 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 328 (886)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------s~~eil~h~~~~~~ 328 (886)
.................+ ...++++.+++.+||..||.+|| ++.++++||||...
T Consensus 199 ~~~~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 199 DNEDDLFESILHDDVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 554444333333332222 23457788999999999999999 89999999999764
No 115
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.6e-30 Score=275.96 Aligned_cols=204 Identities=19% Similarity=0.217 Sum_probs=169.1
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|.+|. .++-...|+++|.+++ +|..+ +++||+||| ..|+|.+||+. .++.++..+-+.++.||++|++||+
T Consensus 247 ~f~~Ea--~iMk~L~H~~lV~l~g-V~~~~---~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe 320 (468)
T KOG0197|consen 247 AFLREA--QIMKKLRHEKLVKLYG-VCTKQ---EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE 320 (468)
T ss_pred HHHHHH--HHHHhCcccCeEEEEE-EEecC---CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 444443 3344557888988888 88753 389999999 88999999976 5678899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++++|||||...|||++.++.+||+|||+++..+.+.....
T Consensus 321 s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~--------------------------------------- 361 (468)
T KOG0197|consen 321 SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS--------------------------------------- 361 (468)
T ss_pred hCCccchhhhhhheeeccCceEEEcccccccccCCCceeec---------------------------------------
Confidence 99999999999999999999999999999985443322100
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
.+ ..+ .--|+|||.+....++.+|||||||
T Consensus 362 -------------~~----------------------------~kf---------PIkWtAPEa~~~~~FS~kSDVWSFG 391 (468)
T KOG0197|consen 362 -------------EG----------------------------GKF---------PIKWTAPEALNYGKFSSKSDVWSFG 391 (468)
T ss_pred -------------CC----------------------------CCC---------CceecCHHHHhhCCcccccceeehh
Confidence 00 111 1238899999999999999999999
Q ss_pred HHHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHh
Q 002736 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (886)
Q Consensus 260 vil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 320 (886)
|+||||+| .++.......+...+..+..-|.+..+++.+.+++..||+.+|++|||++.+.
T Consensus 392 VlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 392 VLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred hhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 99999999 44477778888889998888888889999999999999999999999998553
No 116
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=1.6e-29 Score=277.30 Aligned_cols=197 Identities=18% Similarity=0.269 Sum_probs=155.0
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
.+|++++..++ ++. ..+.+|++||| .|++|.+++.+. ..+++.++..++.||+.||+|||++||+||||||+||
T Consensus 53 ~~~~~i~~~~~-~~~---~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Ni 127 (316)
T cd05620 53 WENPFLTHLYC-TFQ---TKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNV 127 (316)
T ss_pred cCCCCccCeeE-EEE---eCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHe
Confidence 46788887766 332 35688999999 788999998654 5689999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.++.+|++|||+++......
T Consensus 128 l~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------------- 150 (316)
T cd05620 128 MLDRDGHIKIADFGMCKENVFGD--------------------------------------------------------- 150 (316)
T ss_pred EECCCCCEEeCccCCCeecccCC---------------------------------------------------------
Confidence 99999999999999984221000
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
......+||+.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 151 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~ 197 (316)
T cd05620 151 ---------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ---------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 00112378999999999999889999999999999999999 776
Q ss_pred CCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH-HHHhcCCCCCCC
Q 002736 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 328 (886)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-~eil~h~~~~~~ 328 (886)
..... .....+... .+.......+++.+|+.+||+.||.+||++ +++++||||...
T Consensus 198 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 198 GDDED-ELFESIRVD-TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCCHH-HHHHHHHhC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 54433 233333222 122222356788899999999999999998 588899999864
No 117
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.96 E-value=3.6e-28 Score=253.93 Aligned_cols=261 Identities=23% Similarity=0.320 Sum_probs=217.9
Q ss_pred cCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCcccCcccc--cccc-eEEecCCCCeeeEEEeCCCCCeEEEecCCC
Q 002736 565 LNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRD--IHYP-VVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d-~~~lat~~~d~~Ikiwd~~~~~~~~~~--~~~~-~~~~~~~~~I~~l~~~~~~~~~las~s~Dg 640 (886)
+.|.+.|+.+...|. ...+||++..+.|.|||.......... ...| ....+|...-.+|+|++.....|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 569999999999994 567888899999999999874332221 2222 345567776888999999999999999999
Q ss_pred cEEEEECCCce-------EEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeee-eecCCCe
Q 002736 641 VVQVWDVSRSQ-------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGT-IKTKANV 712 (886)
Q Consensus 641 ~V~iWd~~t~~-------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~-~~~~~~v 712 (886)
+|.+||+.... +...+.+|...|..++|++.+..+|+++++|+.+.|||+|+.. ..+... -.|.+.|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~-----~~~~~~~~ah~~~v 275 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT-----SKPSHSVKAHSAEV 275 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC-----CCCcccccccCCce
Confidence 99999996532 3566789999999999999889999999999999999999621 222223 3357889
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEEEECCCcEEEEeCCCCCcc---
Q 002736 713 CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSR--- 787 (886)
Q Consensus 713 ~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~Dg~i~lwd~~~~~~~--- 787 (886)
.|++|+|.++.+||+||.|++|.+||+|+...++.++.+|+..|..|.|+ ....|+|++.|+.+.+||+..-...
T Consensus 276 n~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ 355 (422)
T KOG0264|consen 276 NCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSP 355 (422)
T ss_pred eEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccCh
Confidence 99999999999999999999999999999999999999999999999997 7789999999999999999753221
Q ss_pred -----ccCCCceEeecCCCceeEEEEecCCC-EEEEEcCCCcEEEEecC
Q 002736 788 -----VIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKA 830 (886)
Q Consensus 788 -----~~~~~~~~~~~h~~~v~~v~~sp~g~-~lasgs~Dg~v~iwd~~ 830 (886)
....++.+..||+..|+.+.|+|+.. .|++.++|+.+.||...
T Consensus 356 eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 356 EDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred hhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 12245688899999999999999987 67888999999999876
No 118
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=1.3e-29 Score=282.40 Aligned_cols=231 Identities=16% Similarity=0.211 Sum_probs=163.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ ++. ..+.++++||| .|++|.+++.+. ..+++.+++.++.||+.||+|||++||+|||||
T Consensus 54 ~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlk 128 (350)
T cd05573 54 ILADADSPWIVKLYY-SFQ---DEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIK 128 (350)
T ss_pred HHHhcCCCCccchhh-hee---cCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 344556888888776 443 34678999999 789999999665 678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+||+|||++............... ...... ...
T Consensus 129 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~-------------------------~~~~~~-----------~~~ 172 (350)
T cd05573 129 PDNILIDADGHIKLADFGLCKKMNKAKDREYYLND-------------------------SHNLLF-----------RDN 172 (350)
T ss_pred HHHeEECCCCCEEeecCCCCccCcccCcccccccc-------------------------cccccc-----------ccc
Confidence 99999999999999999999765433211000000 000000 000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
. ..................||+.|+|||.+.+..++.++|||||||+||||++
T Consensus 173 ~-------------------------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 227 (350)
T cd05573 173 V-------------------------LVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGF 227 (350)
T ss_pred c-------------------------cccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCC
Confidence 0 0000000000011223479999999999999999999999999999999999
Q ss_pred -CCCCCchhhHHhHhhc--cCCCChhhhccChhhHHHHHHccCCCCCCCCC-HHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-~~eil~h~~~~~~ 328 (886)
||.............. .....+.....++.+.+||.+||. ||.+||+ +.++++||||...
T Consensus 228 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 228 PPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred CCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 7766554433333322 222222233357888999999997 9999999 9999999999864
No 119
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=5e-30 Score=282.52 Aligned_cols=202 Identities=19% Similarity=0.246 Sum_probs=157.8
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrD 107 (886)
..+...+|++++.+.+ ++. ..+.+|++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||+ +||+|||
T Consensus 47 ~~l~~~~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrD 121 (325)
T cd05594 47 RVLQNSRHPFLTALKY-SFQ---THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 121 (325)
T ss_pred HHHHhCCCCCCCceEE-EEE---cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 3455567888887665 332 34678999999 789999988554 578999999999999999999998 7999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+||+|||+++.......
T Consensus 122 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------------------------------------------- 151 (325)
T cd05594 122 LKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------------- 151 (325)
T ss_pred CCCCeEEECCCCCEEEecCCCCeecCCCCc--------------------------------------------------
Confidence 999999999999999999999853211100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 152 ----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 191 (325)
T cd05594 152 ----------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 191 (325)
T ss_pred ----------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeeeecc
Confidence 0111368999999999998889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||................. ..+....+++.+|+.+||..||.+|+ ++.++++||||...
T Consensus 192 G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 192 GRLPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred CCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 7765544332222222221 12234567889999999999999996 89999999999874
No 120
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.6e-30 Score=295.67 Aligned_cols=212 Identities=17% Similarity=0.219 Sum_probs=170.4
Q ss_pred CCcccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHh
Q 002736 19 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 97 (886)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~ 97 (886)
..+.||+|+|.++.+......++.+- ......+|+|||| .||+|..+|.+.. ++|+..+++|+..|+.||+-
T Consensus 118 ~tA~F~EERDimv~~ns~Wiv~LhyA------FQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAlds 190 (1317)
T KOG0612|consen 118 ETACFREERDIMVFGNSEWIVQLHYA------FQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDS 190 (1317)
T ss_pred hHHHHHHHhHHHHcCCcHHHHHHHHH------hcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHH
Confidence 34679999999887765555554422 2346788999999 9999999997765 89999999999999999999
Q ss_pred hcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 98 lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
+|+.|+|||||||+||||+.+||+|++|||.|-....+..
T Consensus 191 lH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~---------------------------------------- 230 (1317)
T KOG0612|consen 191 LHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT---------------------------------------- 230 (1317)
T ss_pred HHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCc----------------------------------------
Confidence 9999999999999999999999999999999954432210
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC----C-CCCCcc
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCA 252 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~s~~ 252 (886)
......+|||-|.|||++. + +.|+..
T Consensus 231 -------------------------------------------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~e 261 (1317)
T KOG0612|consen 231 -------------------------------------------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRE 261 (1317)
T ss_pred -------------------------------------------------EEeccccCCCCccCHHHHHhhcCCccccCCc
Confidence 0122349999999999985 2 459999
Q ss_pred cccchHHHHHHHHhc---CCCCCchhhHHhHhhccC--CCChhhhccChhhHHHHHHccCCCCCCCCC---HHHHhcCCC
Q 002736 253 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEF 324 (886)
Q Consensus 253 sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~eil~h~~ 324 (886)
+|+|||||++||||+ ||+...-...+-.++.+. .-.|.....++.+.+||.+++. +|..|.. ++++..|||
T Consensus 262 cDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 262 CDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred cchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence 999999999999998 998877666555555552 2233445588899999998775 5778877 999999999
Q ss_pred CCC
Q 002736 325 LNE 327 (886)
Q Consensus 325 ~~~ 327 (886)
|.+
T Consensus 341 F~g 343 (1317)
T KOG0612|consen 341 FEG 343 (1317)
T ss_pred ccC
Confidence 864
No 121
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.9e-29 Score=281.27 Aligned_cols=203 Identities=18% Similarity=0.183 Sum_probs=153.4
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++.+++ ++. ..+..+++||+..++|.+++.+....+++.+++.|+.||+.||.|||++||||||||
T Consensus 109 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk 184 (357)
T PHA03209 109 MLLQNVNHPSVIRMKD-TLV---SGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVK 184 (357)
T ss_pred HHHHhCCCCCCcChhh-eEE---eCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 3456678999988877 443 345688999998889999997666789999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++..+.+||+|||+++......
T Consensus 185 p~Nill~~~~~~kl~DfG~a~~~~~~~----------------------------------------------------- 211 (357)
T PHA03209 185 TENIFINDVDQVCIGDLGAAQFPVVAP----------------------------------------------------- 211 (357)
T ss_pred HHHEEECCCCCEEEecCccccccccCc-----------------------------------------------------
Confidence 999999999999999999984321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 212 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~ 253 (357)
T PHA03209 212 --------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYP 253 (357)
T ss_pred --------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcC
Confidence 0011368999999999999889999999999999999997
Q ss_pred -CCCCCchhh---------HHhHh-hcc-CCCChh-------------------------------hhccChhhHHHHHH
Q 002736 268 -PFSTGEEKT---------RTMSS-LRH-RVLPPQ-------------------------------LLLKFPKEASFCLW 304 (886)
Q Consensus 268 -pf~~~~~~~---------~~~~~-~~~-~~~~~~-------------------------------~~~~~~~~~~li~~ 304 (886)
+++...... ..+.. +.. ...+.. .......+.+||.+
T Consensus 254 ~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 333 (357)
T PHA03209 254 STIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHK 333 (357)
T ss_pred CccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHH
Confidence 332221100 00000 000 000000 01233455679999
Q ss_pred ccCCCCCCCCCHHHHhcCCCCCC
Q 002736 305 LLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 305 ~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
||..||.+|||+.|+|+||||+.
T Consensus 334 mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 334 MLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999975
No 122
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=3.3e-27 Score=230.73 Aligned_cols=273 Identities=15% Similarity=0.191 Sum_probs=220.8
Q ss_pred ccccccccceEEeeecC---ceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 536 WINPFLEGLCKYLSFSK---LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~---~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
+.++..|..+++|+... ..++..|. -+|+..|++++|+|.|++||+|+.|.++.||.-... +......
T Consensus 30 lAscg~Dk~vriw~~~~~~s~~ck~vld----~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~-----efecv~~ 100 (312)
T KOG0645|consen 30 LASCGTDKAVRIWSTSSGDSWTCKTVLD----DGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDG-----EFECVAT 100 (312)
T ss_pred EEeecCCceEEEEecCCCCcEEEEEecc----ccchheeeeeeecCCCcEEEEeeccceEEEeecCCC-----ceeEEee
Confidence 56778899999999884 45555553 369999999999999999999999999999976532 2223344
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCc---eEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEe
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~---~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd 689 (886)
..+|...|.|++|++ ++++||+++.|..|-||.+..+ ++...+++|...|..+.|+| ...+|+++|.|.+|++|+
T Consensus 101 lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTIk~~~ 178 (312)
T KOG0645|consen 101 LEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTIKVYR 178 (312)
T ss_pred eeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC-CcceeEEeccCCeEEEEe
Confidence 557999999999998 7999999999999999998744 57788999999999999999 788999999999999998
Q ss_pred CchhhhhhccCceeeeeecC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEE
Q 002736 690 INQAILLLHLGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLV 768 (886)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~-~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~ 768 (886)
-..... -.+++++..+ ..|.+++|+|. |..|++++.|++|+||-+...- -..|..+++.+.|. ...|+
T Consensus 179 ~~~ddd----W~c~~tl~g~~~TVW~~~F~~~-G~rl~s~sdD~tv~Iw~~~~~~-----~~~~sr~~Y~v~W~-~~~Ia 247 (312)
T KOG0645|consen 179 DEDDDD----WECVQTLDGHENTVWSLAFDNI-GSRLVSCSDDGTVSIWRLYTDL-----SGMHSRALYDVPWD-NGVIA 247 (312)
T ss_pred ecCCCC----eeEEEEecCccceEEEEEecCC-CceEEEecCCcceEeeeeccCc-----chhcccceEeeeec-ccceE
Confidence 763111 4566677654 47999999999 8999999999999999876321 12478899999997 67999
Q ss_pred EEECCCcEEEEeCCCCCc-cccCCCceEeecCCCceeEEEEecC-CCEEEEEcCCCcEEEEecC
Q 002736 769 SASTDNTLKLWDLSMCTS-RVIDTPLHSFTGHTNVKNFVGLSVW-DGYVATGSETNEVFVYHKA 830 (886)
Q Consensus 769 sgs~Dg~i~lwd~~~~~~-~~~~~~~~~~~~h~~~v~~v~~sp~-g~~lasgs~Dg~v~iwd~~ 830 (886)
||+.|+.|+||--..... .........-..|...|++|.|.|. ..+|++||.||.|++|.+.
T Consensus 248 S~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 248 SGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 999999999997764311 0011112234578899999999995 6799999999999999764
No 123
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=2.2e-29 Score=276.03 Aligned_cols=197 Identities=17% Similarity=0.238 Sum_probs=155.4
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
.+|++++.+++ ++. ..+.++++||| .|++|.+++... ..+++.+++.|+.||+.||.|||++||+||||||+||
T Consensus 53 ~~hp~i~~~~~-~~~---~~~~~~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Ni 127 (316)
T cd05592 53 WEHPFLTHLFC-TFQ---TKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNV 127 (316)
T ss_pred cCCCCccceee-EEE---cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHe
Confidence 47888888776 332 34678999999 789999999654 5789999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.++.+||+|||+++.......
T Consensus 128 ll~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------------------------- 151 (316)
T cd05592 128 LLDKDGHIKIADFGMCKENMNGEG-------------------------------------------------------- 151 (316)
T ss_pred EECCCCCEEEccCcCCeECCCCCC--------------------------------------------------------
Confidence 999999999999999853211100
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
.....+||+.|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 152 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~ 197 (316)
T cd05592 152 ----------------------------------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ----------------------------------ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCC
Confidence 0112378999999999999889999999999999999999 776
Q ss_pred CCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH-HHHhcCCCCCCC
Q 002736 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 328 (886)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-~eil~h~~~~~~ 328 (886)
......... .+... .+..+....+++.+|+.+||..+|.+||++ .++++||||...
T Consensus 198 ~~~~~~~~~-~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 198 GEDEDELFD-SILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCCHHHHHH-HHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 554433332 22221 222233455778899999999999999986 578899999864
No 124
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=2.1e-29 Score=278.50 Aligned_cols=198 Identities=19% Similarity=0.228 Sum_probs=151.5
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++.+++ ++. ..+.++++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 63 ~~~~i~~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil 137 (332)
T cd05614 63 QSPFLVTLHY-AFQ---TEAKLHLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENIL 137 (332)
T ss_pred CCCCcccEEE-EEe---cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeE
Confidence 4667766555 332 34678899999 789999999654 56899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||+++........
T Consensus 138 i~~~~~~kl~DfG~~~~~~~~~~~-------------------------------------------------------- 161 (332)
T cd05614 138 LDSEGHVVLTDFGLSKEFLSEEKE-------------------------------------------------------- 161 (332)
T ss_pred ECCCCCEEEeeCcCCccccccCCC--------------------------------------------------------
Confidence 999999999999998543211000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc---CCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
.....+||+.|+|||.+.+.. ++.++|||||||+||||++ ||.
T Consensus 162 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 162 ---------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred ---------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence 011237899999999998754 8899999999999999999 774
Q ss_pred CCch---hhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 271 TGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 271 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
.... .......+. ...++......+.+.+|+.+||..||.+|| +++++++||||...
T Consensus 209 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 209 LEGERNTQSEVSRRIL-KCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCCCCCCHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 3221 111112221 122233334567888999999999999999 78899999999864
No 125
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=2.5e-29 Score=281.21 Aligned_cols=237 Identities=16% Similarity=0.196 Sum_probs=158.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+.+.+|++++..+. .+. ..+.+|++||| .|++|.+++.+. ..+++.+++.++.||+.||+|||++||+|||||
T Consensus 54 il~~~~~~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlK 128 (363)
T cd05628 54 ILVEADSLWVVKMFY-SFQ---DKLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIK 128 (363)
T ss_pred HHHhCCCCCcceEEE-EEe---cCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence 345567888888776 333 34678999999 789999999654 578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++++||+|||+++........... . .. ... ...++.........
T Consensus 129 p~NILi~~~~~vkL~DFGla~~~~~~~~~~~~-~-----~~-~~~------------~~~~~~~~~~~~~~--------- 180 (363)
T cd05628 129 PDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY-R-----NL-NHS------------LPSDFTFQNMNSKR--------- 180 (363)
T ss_pred HHHeEECCCCCEEEeeccCccccccccccccc-c-----cc-ccc------------cccccccccccccc---------
Confidence 99999999999999999999754322100000 0 00 000 00000000000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
..+ .. ...........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 181 ------------------~~~--------~~-~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 181 ------------------KAE--------TW-KRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred ------------------ccc--------hh-hhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 000 00 0000001123489999999999999889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhc--cCCCChhhhccChhhHHHHHHccCCCCC---CCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~---~Rps~~eil~h~~~~~~ 328 (886)
||.............. .....+.....++++.+||.+|+. +|. .||+++|+++||||...
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 234 PPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 7765544333322222 111122223456788899998765 444 45899999999999875
No 126
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=2.1e-29 Score=278.58 Aligned_cols=199 Identities=17% Similarity=0.243 Sum_probs=157.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ ++. ..+.+|++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++||+|||||
T Consensus 54 ~l~~~~h~~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk 128 (333)
T cd05600 54 ILTTTKSEWLVKLLY-AFQ---DDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLK 128 (333)
T ss_pred HHHhCCCCCCccEEE-EEE---cCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 344556888888776 443 35678999999 799999999554 578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+||+|||++......
T Consensus 129 p~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------------ 154 (333)
T cd05600 129 PENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------------ 154 (333)
T ss_pred HHHEEECCCCCEEEEeCcCCcccccc------------------------------------------------------
Confidence 99999999999999999998533110
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
....+||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 155 ---------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 195 (333)
T cd05600 155 ---------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGF 195 (333)
T ss_pred ---------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCC
Confidence 011278999999999999899999999999999999999
Q ss_pred -CCCCCchhhHHhHhhcc---CCCChhh----hccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRH---RVLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||........ +..+.. ....+.. ...++++.+|+.+||..+|.+||++.++++||||...
T Consensus 196 ~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 196 PPFSGSTPNET-WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred CCCCCCCHHHH-HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 7754433322 222221 1111111 2346788899999999999999999999999999864
No 127
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=2.2e-29 Score=276.61 Aligned_cols=208 Identities=16% Similarity=0.158 Sum_probs=149.1
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCC--------CCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
...+.+.+|+|++.++. ++... ....++++|||.+++|.+++... ...+++..++.|++||+.||+|||+
T Consensus 49 ~~~l~~l~h~niv~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 126 (317)
T cd07868 49 IALLRELKHPNVISLQK-VFLSH-ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 126 (317)
T ss_pred HHHHHhcCCCCCcceee-eEecC-CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 34456678999988776 44322 34568899999888999987421 2358999999999999999999999
Q ss_pred cCeeecccCCcceee----ccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccC
Q 002736 101 QGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (886)
Q Consensus 101 ~giiHrDlkP~NIll----~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 176 (886)
+||+||||||+|||+ +..+.+||+|||+++........
T Consensus 127 ~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~-------------------------------------- 168 (317)
T cd07868 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-------------------------------------- 168 (317)
T ss_pred CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------------
Confidence 999999999999999 45678999999998644221000
Q ss_pred CCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCccccc
Q 002736 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 255 (886)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDI 255 (886)
.......+||++|+|||++.+. .++.++||
T Consensus 169 -------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 199 (317)
T cd07868 169 -------------------------------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDI 199 (317)
T ss_pred -------------------------------------------------ccccCCccccccccCCHHHcCCCCcCchhhH
Confidence 0001123789999999999874 48999999
Q ss_pred chHHHHHHHHhc---CCCCCchhh--------HHhHhhcc----------------------------CCCC--------
Q 002736 256 YRLGVLLFELFC---PFSTGEEKT--------RTMSSLRH----------------------------RVLP-------- 288 (886)
Q Consensus 256 wSlGvil~eLl~---pf~~~~~~~--------~~~~~~~~----------------------------~~~~-------- 288 (886)
|||||++|||++ ||....... ..+..+.. ....
T Consensus 200 wslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (317)
T cd07868 200 WAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYM 279 (317)
T ss_pred HHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchH
Confidence 999999999999 664322110 00000000 0000
Q ss_pred -hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 289 -PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 289 -~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
.......+.+.+||.+||.+||.+|||++|+|+||||
T Consensus 280 ~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 280 EKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0000112356799999999999999999999999997
No 128
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=2.4e-29 Score=277.40 Aligned_cols=197 Identities=17% Similarity=0.237 Sum_probs=152.9
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++..++ ++. ..+.+|++||| .|++|.+++.+. +.+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 54 ~hp~Iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 128 (329)
T cd05588 54 NHPFLVGLHS-CFQ---TESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVL 128 (329)
T ss_pred CCCCCCceEE-EEE---cCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 6888888776 443 34678999999 789999998554 57899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||+++.......
T Consensus 129 i~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------------------- 151 (329)
T cd05588 129 LDAEGHIKLTDYGMCKEGIRPGD--------------------------------------------------------- 151 (329)
T ss_pred ECCCCCEEECcCccccccccCCC---------------------------------------------------------
Confidence 99999999999999853210000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 152 ---------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ---------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 0112378999999999999889999999999999999999 7742
Q ss_pred Cc--------hhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC------HHHHhcCCCCCCC
Q 002736 272 GE--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (886)
Q Consensus 272 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps------~~eil~h~~~~~~ 328 (886)
.. ........+.... ...+...++.+.+++.+||+.||.+|++ +.++++||||...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 199 VGMSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred ccccccccccchHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 11 1111122222221 1222345677889999999999999987 7899999999764
No 129
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=2.9e-29 Score=275.10 Aligned_cols=198 Identities=19% Similarity=0.265 Sum_probs=156.1
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
.+|++++.+++ ++. ..+.++++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 53 ~~hp~iv~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Ni 127 (316)
T cd05619 53 WEHPFLTHLYC-TFQ---TKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNI 127 (316)
T ss_pred cCCCcCcceEE-EEE---eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHE
Confidence 47888888776 443 34678999999 789999999653 5689999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.++.+|++|||++........
T Consensus 128 l~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------------------- 151 (316)
T cd05619 128 LLDTDGHIKIADFGMCKENMLGDA-------------------------------------------------------- 151 (316)
T ss_pred EECCCCCEEEccCCcceECCCCCC--------------------------------------------------------
Confidence 999999999999999843211000
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
......||+.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 152 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (316)
T cd05619 152 ----------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ----------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 0112378999999999998889999999999999999999 776
Q ss_pred CCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHH-HHhcCCCCCCCc
Q 002736 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (886)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~-eil~h~~~~~~~ 329 (886)
..... .....+.... +........++.+|+.+||..||.+||++. ++++||||....
T Consensus 198 ~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 198 GHDEE-ELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CCCHH-HHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 54433 2233332221 112223456788999999999999999996 899999998753
No 130
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=2.8e-29 Score=276.23 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=158.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. ..+.+|++||| .|++|.+++.+. ..+++..+..++.||+.||.|||++||+|||||
T Consensus 53 il~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk 127 (323)
T cd05584 53 ILEAVKHPFIVDLIY-AFQ---TGGKLYLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQGIIYRDLK 127 (323)
T ss_pred HHHhCCCCchhceee-EEe---cCCeEEEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 455668999988777 333 24578999998 888999999654 567899999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+||+|||+++.......
T Consensus 128 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------- 155 (323)
T cd05584 128 PENILLDAQGHVKLTDFGLCKESIHEGT---------------------------------------------------- 155 (323)
T ss_pred HHHeEECCCCCEEEeeCcCCeecccCCC----------------------------------------------------
Confidence 9999999999999999999853211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......||+.|+|||.+.+..++.++|||||||+||||++
T Consensus 156 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 197 (323)
T cd05584 156 --------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGA 197 (323)
T ss_pred --------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCC
Confidence 0011368999999999998889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||........ +..+..... +.+....+.+.+||.+||.++|.+|| ++.++++||||...
T Consensus 198 ~pf~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 198 PPFTAENRKKT-IDKILKGKL-NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCCCCCHHHH-HHHHHcCCC-CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 7755544333 333322221 22234567888999999999999999 89999999999864
No 131
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=1.3e-29 Score=289.60 Aligned_cols=211 Identities=14% Similarity=0.194 Sum_probs=152.6
Q ss_pred CceeecccccccCCCCCCc---ccccc-ccCCceEEEEeeCCcchhhhhc---CCCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 28 DGVELTHGDHLRNQGGLSG---VCENE-AAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~i~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
+...+...+|++++.+++- .|... .....++++|||.+++|.+++. .....+++..++.|+.||+.||.|||+
T Consensus 109 Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~ 188 (440)
T PTZ00036 109 ELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS 188 (440)
T ss_pred HHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3345556678888775441 12111 1223467899998889988774 234678999999999999999999999
Q ss_pred cCeeecccCCcceeeccCC-ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 101 QGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~-~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
+||+||||||+||||+..+ .+||+|||+++......
T Consensus 189 ~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~------------------------------------------- 225 (440)
T PTZ00036 189 KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ------------------------------------------- 225 (440)
T ss_pred CCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC-------------------------------------------
Confidence 9999999999999998665 69999999995432110
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 258 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSl 258 (886)
.....+||++|+|||++.+. .|+.++|||||
T Consensus 226 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 257 (440)
T PTZ00036 226 ------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSL 257 (440)
T ss_pred ------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHH
Confidence 00113779999999998764 59999999999
Q ss_pred HHHHHHHhc---CCCCCchhhHHhHhhccC------------------CCCh----h-----hhccChhhHHHHHHccCC
Q 002736 259 GVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP----Q-----LLLKFPKEASFCLWLLHP 308 (886)
Q Consensus 259 Gvil~eLl~---pf~~~~~~~~~~~~~~~~------------------~~~~----~-----~~~~~~~~~~li~~~L~~ 308 (886)
||+||||++ ||............+... .++. . +...++++.+||.+||.+
T Consensus 258 Gvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~ 337 (440)
T PTZ00036 258 GCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKY 337 (440)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCC
Confidence 999999999 665443322222111100 0000 0 112346788999999999
Q ss_pred CCCCCCCHHHHhcCCCCCCCc
Q 002736 309 EPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 309 dP~~Rps~~eil~h~~~~~~~ 329 (886)
||.+|||+.|+|+||||....
T Consensus 338 dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 338 EPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred ChhHCcCHHHHhCChhHHhhh
Confidence 999999999999999997643
No 132
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=2.4e-29 Score=276.87 Aligned_cols=200 Identities=19% Similarity=0.222 Sum_probs=157.3
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++..+. .+. ..+.++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||
T Consensus 50 ~~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp 124 (323)
T cd05575 50 LKNVKHPFLVGLHY-SFQ---TADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKP 124 (323)
T ss_pred HhhCCCCCCCCeeE-EEE---eCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCH
Confidence 34568899988766 332 34678999999 889999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||+++.......
T Consensus 125 ~NIll~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------- 151 (323)
T cd05575 125 ENILLDSQGHVVLTDFGLCKEGIEHSK----------------------------------------------------- 151 (323)
T ss_pred HHeEECCCCcEEEeccCCCcccccCCC-----------------------------------------------------
Confidence 999999999999999999853211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~ 194 (323)
T cd05575 152 -------------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLP 194 (323)
T ss_pred -------------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCC
Confidence 0112378999999999999889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH----HHHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~----~eil~h~~~~~~ 328 (886)
||....... .+..+..... ......++.+.+++.+||+.||.+||++ .+++.||||...
T Consensus 195 pf~~~~~~~-~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 195 PFYSRDTAE-MYDNILNKPL-RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCHHH-HHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 776544333 2333322221 1222346788899999999999999987 699999999764
No 133
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=7.7e-30 Score=254.77 Aligned_cols=212 Identities=18% Similarity=0.226 Sum_probs=156.1
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcC----CCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~----~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
+.++....|+|++.+.- +... ....+++++||..-+|.+.|+- ..+.++...++.|+.||++||.|||++-|+
T Consensus 78 iaL~REl~h~nvi~Lv~-Vfl~--~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvl 154 (438)
T KOG0666|consen 78 IALLRELKHPNVISLVK-VFLS--HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVL 154 (438)
T ss_pred HHHHHHhcCCcchhHHH-HHhc--cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhhee
Confidence 33444466777766544 3322 2567889999999999998842 235789999999999999999999999999
Q ss_pred ecccCCcceeeccC----CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 105 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 105 HrDlkP~NIll~~~----~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
||||||+|||+..+ |.|||+|+|+++.+..+-.
T Consensus 155 HRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plk------------------------------------------- 191 (438)
T KOG0666|consen 155 HRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLK------------------------------------------- 191 (438)
T ss_pred eccCCcceEEEeccCCccCeeEeecccHHHHhhcccc-------------------------------------------
Confidence 99999999999876 8999999999976633210
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCc-eeeeeccccceecccccCCCC-CCcccccchH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAP-VSCASDIYRL 258 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSl 258 (886)
|+ ....++-|.||+|||.+.|.. ||.+.|||++
T Consensus 192 ---------------------------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAi 226 (438)
T KOG0666|consen 192 ---------------------------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAI 226 (438)
T ss_pred ---------------------------------------------ccccCCceEEEEEecChHHhcccccccchhhhHHH
Confidence 00 011237799999999999966 9999999999
Q ss_pred HHHHHHHhc--CCCCCchhhH-H--------hHhh----------------------------ccCCCCh--------hh
Q 002736 259 GVLLFELFC--PFSTGEEKTR-T--------MSSL----------------------------RHRVLPP--------QL 291 (886)
Q Consensus 259 Gvil~eLl~--pf~~~~~~~~-~--------~~~~----------------------------~~~~~~~--------~~ 291 (886)
|||+.|||+ |.+.+.+... . +..+ +.....+ ..
T Consensus 227 GCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~ 306 (438)
T KOG0666|consen 227 GCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKH 306 (438)
T ss_pred HHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHh
Confidence 999999999 6544432211 1 1111 1000111 01
Q ss_pred hccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 292 ~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
....+...+|+.+||.+||.+|+|++++|+|+||.+...+
T Consensus 307 k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 307 KVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred cCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 1134456799999999999999999999999999987554
No 134
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=2.5e-29 Score=276.83 Aligned_cols=199 Identities=16% Similarity=0.200 Sum_probs=157.3
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+.+.+|++++.+++ ++. ..+.+|++||| .|++|..++.+ ..+++.+++.++.||+.||.|||++||+||||||
T Consensus 56 ~~~l~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp 129 (324)
T cd05589 56 ANSERHPFLVNLFA-CFQ---TEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKL 129 (324)
T ss_pred ccccCCCChhceee-EEE---cCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCH
Confidence 45668999988777 333 35678999999 88999998854 4689999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||+++.......
T Consensus 130 ~Nill~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------------- 156 (324)
T cd05589 130 DNLLLDTEGFVKIADFGLCKEGMGFGD----------------------------------------------------- 156 (324)
T ss_pred HHeEECCCCcEEeCcccCCccCCCCCC-----------------------------------------------------
Confidence 999999999999999999843211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
.....+|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~ 199 (324)
T cd05589 157 -------------------------------------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGES 199 (324)
T ss_pred -------------------------------------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCC
Confidence 0112378999999999999889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~ 328 (886)
||.................. .+...++.+.+++.+||..||.+|| ++.++++||||...
T Consensus 200 pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 200 PFPGDDEEEVFDSIVNDEVR--YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCCCCHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 77554443333222222222 2223567788999999999999999 69999999999864
No 135
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=2.7e-27 Score=240.22 Aligned_cols=288 Identities=14% Similarity=0.214 Sum_probs=231.6
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
+..|+..|++++.+|+.+++||||.|..-.||+..+.. .+....+|+..|+|+.|+. ++.+||||+.+|.|+
T Consensus 60 F~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge-------~~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v~ 131 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE-------FAGELTGHKDSVTCCSFSH-DGTLLATGDMSGKVL 131 (399)
T ss_pred hhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc-------ceeEecCCCCceEEEEEcc-CceEEEecCCCccEE
Confidence 35699999999999999999999999999999998742 3445567999999999997 899999999999999
Q ss_pred EEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCC
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSG 722 (886)
Q Consensus 644 iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~ 722 (886)
||+..++.....+..-...+.-+.|+| .+..|+.|+.||.+.+|.+.+ +...+.+. +..+++|=.|.|+ |
T Consensus 132 v~~~stg~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~-------~~~~kv~~Gh~~~ct~G~f~pd-G 202 (399)
T KOG0296|consen 132 VFKVSTGGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPS-------QALCKVMSGHNSPCTCGEFIPD-G 202 (399)
T ss_pred EEEcccCceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCC-------cceeeEecCCCCCcccccccCC-C
Confidence 999999988888865567777899999 899999999999999999988 44444554 4567999999999 9
Q ss_pred cEEEEEeCCCeEEEEecCCCCcceEEEec-CCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCC--CceEeec
Q 002736 723 RSLAFGSADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDT--PLHSFTG 798 (886)
Q Consensus 723 ~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~-h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~--~~~~~~~ 798 (886)
+.+++|..||+|++||+.++. |++.+.+ ......++.+. .+..+++|+.++.+++-...+++....+. -.....+
T Consensus 203 Kr~~tgy~dgti~~Wn~ktg~-p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~ 281 (399)
T KOG0296|consen 203 KRILTGYDDGTIIVWNPKTGQ-PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPS 281 (399)
T ss_pred ceEEEEecCceEEEEecCCCc-eeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCcccccc
Confidence 999999999999999999997 5777653 23456677876 88889999999999888877664310000 0011124
Q ss_pred CCCceeEEEEecC---CCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEe
Q 002736 799 HTNVKNFVGLSVW---DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 875 (886)
Q Consensus 799 h~~~v~~v~~sp~---g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~ 875 (886)
+...+.+|.+.|. =.+.|+|+-||+|-|||+...+..... .|...|..+.|-+ .+ +|+|++
T Consensus 282 ~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c--------------~he~~V~~l~w~~-t~-~l~t~c 345 (399)
T KOG0296|consen 282 QEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC--------------EHEDGVTKLKWLN-TD-YLLTAC 345 (399)
T ss_pred chhhhhhhhhcccccccchhhcccccceEEEEecccchhheec--------------cCCCceEEEEEcC-cc-hheeec
Confidence 5555666665554 458999999999999999876543322 3456699999998 67 899999
Q ss_pred CCCCEEEEEe
Q 002736 876 SSGNIKILEM 885 (886)
Q Consensus 876 ~dg~I~iw~l 885 (886)
.||+|++||.
T Consensus 346 ~~g~v~~wDa 355 (399)
T KOG0296|consen 346 ANGKVRQWDA 355 (399)
T ss_pred cCceEEeeec
Confidence 9999999984
No 136
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=1.4e-29 Score=292.84 Aligned_cols=206 Identities=19% Similarity=0.238 Sum_probs=163.0
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
...+...+|++++..++ .+. ..+.+|++||| .|++|.++|.. ....+++.++..++.||+.||+|||++||+
T Consensus 116 ~~~l~~l~Hpniv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~iv 191 (478)
T PTZ00267 116 LHCLAACDHFGIVKHFD-DFK---SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMM 191 (478)
T ss_pred HHHHHhCCCCCEeEEEE-EEE---ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 44566678999999887 443 34679999999 79999988743 234689999999999999999999999999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
||||||+|||++.++.+||+|||+++........
T Consensus 192 HrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~---------------------------------------------- 225 (478)
T PTZ00267 192 HRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL---------------------------------------------- 225 (478)
T ss_pred ECCcCHHhEEECCCCcEEEEeCcCceecCCcccc----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~e 264 (886)
......+||+.|+|||.+.+..++.++|||||||++||
T Consensus 226 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 263 (478)
T PTZ00267 226 ------------------------------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYE 263 (478)
T ss_pred ------------------------------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHH
Confidence 00112378999999999998889999999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
|++ ||...... ..+..+.....++.+...++.+.+||.+||..+|.+||++.+++.|+|+..
T Consensus 264 l~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 264 LLTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 999 77554433 333333333344444456678899999999999999999999999998854
No 137
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.7e-29 Score=288.41 Aligned_cols=211 Identities=19% Similarity=0.245 Sum_probs=160.5
Q ss_pred ceeecccccccCCCCCCcccccc----ccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
...+...+|++++.....+.... .....++++||| .+++|.++|+. ....+++.++..|+.||+.||.|||+
T Consensus 82 i~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~ 161 (496)
T PTZ00283 82 VCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS 161 (496)
T ss_pred HHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33455667887776544211111 111246789999 88999999853 23578999999999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
+||+||||||+|||++.++.+||+|||+++.........
T Consensus 162 ~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~----------------------------------------- 200 (496)
T PTZ00283 162 KHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDD----------------------------------------- 200 (496)
T ss_pred CCEecCCCCHHHEEEeCCCCEEEEecccCeecccccccc-----------------------------------------
Confidence 999999999999999999999999999986442110000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
.....+||+.|+|||.+.+..++.++|||||||
T Consensus 201 -----------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGv 233 (496)
T PTZ00283 201 -----------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGV 233 (496)
T ss_pred -----------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHHHHHHHH
Confidence 001237899999999999988999999999999
Q ss_pred HHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 261 il~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
+||||++ ||...... ..+........++.+...++.+.+++.+||+.||.+||++.++++|||+...
T Consensus 234 ilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 234 LLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 9999999 77554433 3333333334444445567889999999999999999999999999998754
No 138
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=3.8e-29 Score=275.77 Aligned_cols=198 Identities=18% Similarity=0.246 Sum_probs=152.7
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
.+|++++.+++ ++. ..+.++++||| .|++|..++.+. ..+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 53 ~~hp~iv~~~~-~~~---~~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Ni 127 (329)
T cd05618 53 SNHPFLVGLHS-CFQ---TESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 127 (329)
T ss_pred CCCCcCCceee-EEE---eCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHE
Confidence 37888888776 333 34678899999 889999988554 5789999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.++.+||+|||+++.......
T Consensus 128 li~~~~~~kL~DfG~~~~~~~~~~-------------------------------------------------------- 151 (329)
T cd05618 128 LLDSEGHIKLTDYGMCKEGLRPGD-------------------------------------------------------- 151 (329)
T ss_pred EECCCCCEEEeeCCccccccCCCC--------------------------------------------------------
Confidence 999999999999999853211000
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 152 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 152 ----------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred ----------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 0112378999999999999889999999999999999999 773
Q ss_pred CCc--------hhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC------HHHHhcCCCCCCC
Q 002736 271 TGE--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (886)
Q Consensus 271 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps------~~eil~h~~~~~~ 328 (886)
... ........+... ....+....+.+.+|+.+||+.||.+||+ +.++++||||...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 198 IVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred cCCCcCCcccccHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 210 011111112211 11222345677889999999999999998 5799999999764
No 139
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=2.9e-29 Score=290.03 Aligned_cols=181 Identities=16% Similarity=0.268 Sum_probs=138.5
Q ss_pred cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecccCCcceeeccCC------------
Q 002736 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFN------------ 119 (886)
Q Consensus 53 ~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrDlkP~NIll~~~~------------ 119 (886)
..+++|++||+.|++|.++|.+. +.+++.+++.|+.||+.||+|||+ .|||||||||+|||++..+
T Consensus 203 ~~~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 203 ETGHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred CCceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 34678999999999999999654 578999999999999999999998 5999999999999998665
Q ss_pred ----ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCc
Q 002736 120 ----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (886)
Q Consensus 120 ----~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (886)
.+||+|||.+.....
T Consensus 282 ~~~~~vkl~DfG~~~~~~~------------------------------------------------------------- 300 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERH------------------------------------------------------------- 300 (467)
T ss_pred CCCceEEECCCCccccCcc-------------------------------------------------------------
Confidence 488888887632100
Q ss_pred ccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCC
Q 002736 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (886)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~ 272 (886)
..+..+||++|+|||++.+..|+.++|||||||+||||++ ||...
T Consensus 301 --------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 301 --------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred --------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 0112378999999999999999999999999999999999 66543
Q ss_pred chhhHH--hHhhccCCCChhh---------------------------------------hccChhhHHHHHHccCCCCC
Q 002736 273 EEKTRT--MSSLRHRVLPPQL---------------------------------------LLKFPKEASFCLWLLHPEPS 311 (886)
Q Consensus 273 ~~~~~~--~~~~~~~~~~~~~---------------------------------------~~~~~~~~~li~~~L~~dP~ 311 (886)
...... +..... .+|..+ ....+.+.+||.+||++||.
T Consensus 349 ~~~~~~~~i~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 349 DNLEHLHLMEKTLG-RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred ChHHHHHHHHHHcC-CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 322111 111100 000000 00124456999999999999
Q ss_pred CCCCHHHHhcCCCCCCC
Q 002736 312 GRPKMGELLQSEFLNEP 328 (886)
Q Consensus 312 ~Rps~~eil~h~~~~~~ 328 (886)
+|||+.|+|+||||...
T Consensus 428 ~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 428 KRLNARQMTTHPYVLKY 444 (467)
T ss_pred hCCCHHHHhcCcccccc
Confidence 99999999999999864
No 140
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=3.7e-29 Score=280.20 Aligned_cols=203 Identities=15% Similarity=0.199 Sum_probs=157.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+.+.+|++++.+++ ++. ..+.++++||| .|++|.+++.. ..+++..+..++.||+.||.|||++||+|||||
T Consensus 96 il~~~~h~~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk 169 (370)
T cd05596 96 IMAHANSEWIVQLHY-AFQ---DDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVK 169 (370)
T ss_pred HHHhCCCCCcceEEE-EEe---cCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 455678899988776 333 34678999999 78999999854 358999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+||+|||++.........
T Consensus 170 p~NILl~~~~~~kL~DfG~~~~~~~~~~~--------------------------------------------------- 198 (370)
T cd05596 170 PDNMLLDKSGHLKLADFGTCMKMDANGMV--------------------------------------------------- 198 (370)
T ss_pred HHHEEEcCCCCEEEEeccceeeccCCCcc---------------------------------------------------
Confidence 99999999999999999998543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC----CCCcccccchHHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDIwSlGvil~eL 265 (886)
.....+||+.|+|||.+.+. .++.++|||||||+||||
T Consensus 199 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyel 240 (370)
T cd05596 199 --------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (370)
T ss_pred --------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHH
Confidence 00113789999999998753 388999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccC--CCChhhhccChhhHHHHHHccCCCCCC--CCCHHHHhcCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rps~~eil~h~~~~~~ 328 (886)
++ ||............+... ...+.....+..+.+||.+||..+|.+ |+++.|+++||||...
T Consensus 241 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 241 LVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 99 776554433332222221 122233345678889999999999987 9999999999999863
No 141
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=275.63 Aligned_cols=194 Identities=20% Similarity=0.200 Sum_probs=153.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+-..+|+|++...+ ++.+ .-..+++||. .|+-|.+.+.... .+. .++.+|++||+.||+|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~---~~~~~~v~e~l~g~ell~ri~~~~-~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYED---GKEIYLVMELLDGGELLRRIRSKP-EFC-SEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecC---CceeeeeehhccccHHHHHHHhcc-hhH-HHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 4455678888888776 6654 4567888888 6666666664432 223 788899999999999999999999999
Q ss_pred CCcceee-ccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 109 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 109 kP~NIll-~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
||+|||+ ...++++++|||.++....+. .
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~~----------------------------------------------~---- 471 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERSC----------------------------------------------D---- 471 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchhh----------------------------------------------c----
Confidence 9999999 599999999999996542210 0
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
..+-|..|.|||++....|+.++||||||++||+||+
T Consensus 472 -------------------------------------------tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 472 -------------------------------------------TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred -------------------------------------------ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 0133778999999998889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||.........+..+.... .-...+..+++|+.+||+.||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i~~~~---~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRIQMPK---FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhhcCCc---cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 7766665544554444332 225677889999999999999999999999999999
No 142
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=3.1e-29 Score=282.30 Aligned_cols=250 Identities=15% Similarity=0.203 Sum_probs=161.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ .+. ..+.+|++||| .|++|.+++.+. ..+++..++.++.||+.||+|||++||+|||||
T Consensus 54 il~~l~h~~iv~l~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlK 128 (381)
T cd05626 54 ILAEADNEWVVKLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIK 128 (381)
T ss_pred HHHhcCCCCeeeeEE-EEe---cCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCc
Confidence 445568888888777 443 34678999999 789999999654 568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||||+..+++|++|||+++.............. .. .......+.... .. .+.|...
T Consensus 129 p~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~-~~--~~~~~~~ 186 (381)
T cd05626 129 PDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKG-SH------------------IRQDSMEPSDLW-DD--VSNCRCG 186 (381)
T ss_pred HHHEEECCCCCEEEeeCcCCccccccccccccccc-cc------------------ccccccCccccc-cc--ccccccc
Confidence 99999999999999999998654322110000000 00 000000000000 00 0000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.+ ..+.. ... ............+||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 187 -----~~-----------~~~~~----~~~-~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 245 (381)
T cd05626 187 -----DR-----------LKTLE----QRA-TKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQ 245 (381)
T ss_pred -----cc-----------cchhh----ccc-cccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCC
Confidence 00 00000 000 00000001123489999999999998889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhcc--CCCChhhhccChhhHHHHHHcc--CCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L--~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||............+.. ....+.....++++.+||.+|| ..+|..|+++.++++||||...
T Consensus 246 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 246 PPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred CCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 78665544433333321 2222333346788899999855 4455569999999999999864
No 143
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=3.9e-29 Score=281.84 Aligned_cols=249 Identities=15% Similarity=0.187 Sum_probs=163.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ ++. ..+.+|++||| .|++|.++|.+. +.+++..++.++.||+.||+|||++||+|||||
T Consensus 54 il~~~~h~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlK 128 (382)
T cd05625 54 ILAEADNEWVVRLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIK 128 (382)
T ss_pred HHHhCCCCcCCeEEE-EEE---eCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 445568899988877 333 35678999999 788999999654 568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++++||+|||++..+............... +....+|...... ...|...
T Consensus 129 p~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~-----~~~~~~~ 186 (382)
T cd05625 129 PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHV-----------------RQDSMDFSNEWGD-----PANCRCG 186 (382)
T ss_pred HHHEEECCCCCEEEeECCCCcccccccccccccccccc-----------------ccccccccccccc-----ccccccc
Confidence 99999999999999999998654321110000000000 0000000000000 0000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
. ... ..... .............+||+.|+|||++.+..|+.++|||||||+||||++
T Consensus 187 ~-----~~~---------------~~~~~-~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~ 245 (382)
T cd05625 187 D-----RLK---------------PLERR-AARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 245 (382)
T ss_pred c-----ccc---------------chhhh-hccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCC
Confidence 0 000 00000 000000001123489999999999999889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhcc--CCCChhhhccChhhHHHHHHccCCCCCCCCC---HHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~eil~h~~~~~~ 328 (886)
||.........+..+.. ....+.....++++.++|.+|+ .+|.+|++ +.++++||||...
T Consensus 246 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 246 PPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred CCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 78665544444443332 1222333456788889999976 59999987 9999999999864
No 144
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=1.5e-29 Score=279.42 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=156.8
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++..++ ++. ..+.++++||| .|++|.+++.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 55 ~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp 130 (330)
T cd05601 55 LSISNSPWIPQLQY-AFQ---DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKP 130 (330)
T ss_pred HHhCCCCCCcceee-EEe---cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCch
Confidence 34457788877665 333 24678999999 79999999977656799999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++..+.+||+|||++.........
T Consensus 131 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~---------------------------------------------------- 158 (330)
T cd05601 131 ENVLIDRTGHIKLADFGSAARLTANKMV---------------------------------------------------- 158 (330)
T ss_pred HheEECCCCCEEeccCCCCeECCCCCce----------------------------------------------------
Confidence 9999999999999999998543211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC------CCCCCcccccchHHHHHHH
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~~sDIwSlGvil~e 264 (886)
......||+.|+|||++. +..++.++|||||||++||
T Consensus 159 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e 201 (330)
T cd05601 159 -------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE 201 (330)
T ss_pred -------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence 011126899999999987 4558899999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCC--CChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|++ ||............+.... ..+.....++.+.+|+.+||. +|.+||++.++++||||...
T Consensus 202 l~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 202 MIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred eccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 999 7765544333332222211 112223456778899999998 99999999999999999864
No 145
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.2e-27 Score=267.59 Aligned_cols=250 Identities=20% Similarity=0.380 Sum_probs=203.6
Q ss_pred Cccc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCc----------------------------ccC----cc----
Q 002736 562 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN----EN---- 604 (886)
Q Consensus 562 ~~~~-~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~----------------------------~~~----~~---- 604 (886)
..+. .|.+.|.++.|++||+|||+||.|+.|+||.+.. ... ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3444 7999999999999999999999999999998654 000 00
Q ss_pred ------cccc----------cceE-EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEE
Q 002736 605 ------RDIH----------YPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667 (886)
Q Consensus 605 ------~~~~----------~~~~-~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~ 667 (886)
.... .|+. ..+|.+.|.+|.|+. .++|+|++.|.||+||++.+.+++..|. |..-|+||+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVa 416 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVA 416 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEE
Confidence 0000 1222 237999999999996 7899999999999999999999999995 999999999
Q ss_pred EccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceE
Q 002736 668 FSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC 747 (886)
Q Consensus 668 ~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~ 747 (886)
|+|.|.++|++||-||.|+||+|.. ...+.-...+.-|++++|.|+ |+..++|+.+|.+++|+.+..+. ..
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d-------~~Vv~W~Dl~~lITAvcy~Pd-Gk~avIGt~~G~C~fY~t~~lk~-~~ 487 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISD-------KKVVDWNDLRDLITAVCYSPD-GKGAVIGTFNGYCRFYDTEGLKL-VS 487 (712)
T ss_pred ecccCCCcEeecccccceEEeecCc-------CeeEeehhhhhhheeEEeccC-CceEEEEEeccEEEEEEccCCeE-EE
Confidence 9999999999999999999999987 444433345677999999999 99999999999999999988764 32
Q ss_pred EEe---------cCCCCeEEEEec--CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCce--eEEEEecCCCE
Q 002736 748 TLI---------GHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--NFVGLSVWDGY 814 (886)
Q Consensus 748 ~~~---------~h~~~V~~v~f~--~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--~~v~~sp~g~~ 814 (886)
.+. .|. .|+++-|. +...++..+.|..|||+|++.. .++..|+|+.+.- ....|+.||++
T Consensus 488 ~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~------~lv~KfKG~~n~~SQ~~Asfs~Dgk~ 560 (712)
T KOG0283|consen 488 DFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK------DLVHKFKGFRNTSSQISASFSSDGKH 560 (712)
T ss_pred eeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccch------hhhhhhcccccCCcceeeeEccCCCE
Confidence 221 133 79999996 4456777889999999999775 4588888876543 44579999999
Q ss_pred EEEEcCCCcEEEEecC
Q 002736 815 VATGSETNEVFVYHKA 830 (886)
Q Consensus 815 lasgs~Dg~v~iwd~~ 830 (886)
|++||+|..|+||+..
T Consensus 561 IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 561 IVSASEDSWVYIWKND 576 (712)
T ss_pred EEEeecCceEEEEeCC
Confidence 9999999999999973
No 146
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=5.2e-29 Score=274.27 Aligned_cols=201 Identities=18% Similarity=0.261 Sum_probs=154.3
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+....|++.+..+.+++. ..+.+|++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||
T Consensus 54 l~~~~~~~~i~~~~~~~~---~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp 129 (324)
T cd05587 54 LALPGKPPFLTQLHSCFQ---TMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKL 129 (324)
T ss_pred HHhcCCCCceeeeEEEEE---cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence 344456554443332332 34678999999 789999999554 5689999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||++.......
T Consensus 130 ~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------------ 155 (324)
T cd05587 130 DNVMLDAEGHIKIADFGMCKENIFGG------------------------------------------------------ 155 (324)
T ss_pred HHeEEcCCCCEEEeecCcceecCCCC------------------------------------------------------
Confidence 99999999999999999984321100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 156 ------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~ 199 (324)
T cd05587 156 ------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 199 (324)
T ss_pred ------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCC
Confidence 00112378999999999999889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH-----HHHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~eil~h~~~~~~ 328 (886)
||................ +..+....+.+.+++.+||.+||.+|+++ .++++||||...
T Consensus 200 pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 200 PFDGEDEDELFQSIMEHN--VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred CCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 776554433333332222 12223456788899999999999999976 899999999864
No 147
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=7.3e-27 Score=255.61 Aligned_cols=316 Identities=18% Similarity=0.250 Sum_probs=237.9
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecC
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~ 616 (886)
+.|..||.|++|+..+.....++ -+|++.|+++.|+..|..||+||.|+.|.|||+-.. .-.....+|
T Consensus 81 AVGYaDGsVqif~~~s~~~~~tf-----ngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E-------~Gl~rL~GH 148 (888)
T KOG0306|consen 81 AVGYADGSVQIFSLESEEILITF-----NGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGE-------EGLFRLRGH 148 (888)
T ss_pred EEEecCceEEeeccCCCceeeee-----cccccceEEEEEcccCceEeecCCCccEEEEEeccc-------eeeEEeecc
Confidence 67889999999999987666665 579999999999999999999999999999998642 122344578
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchh---
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA--- 693 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~--- 693 (886)
...|+..-|.. ..+.++|++.|+.|++||+.+..+..+.-.|.+.+|.+++.+ +.+++++.|+.+++|++...
T Consensus 149 kd~iT~~~F~~-~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~---~~lvt~~~dse~~v~~L~~~~D~ 224 (888)
T KOG0306|consen 149 KDSITQALFLN-GDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE---KLLVTAGTDSELKVWELAFEDDE 224 (888)
T ss_pred hHHHhHHhccC-CCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec---ceEEEEecCCceEEEEeeccccc
Confidence 89999888876 688999999999999999999999999999999999999984 78999999999999998100
Q ss_pred ------------------------------------------------------------h-------hhh---------
Q 002736 694 ------------------------------------------------------------I-------LLL--------- 697 (886)
Q Consensus 694 ------------------------------------------------------------~-------~~~--------- 697 (886)
. ...
T Consensus 225 ~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~ 304 (888)
T KOG0306|consen 225 KETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVE 304 (888)
T ss_pred ccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchh
Confidence 0 000
Q ss_pred --------cc------------------Cce-------------------------------eeeeecCCCeEEEEEeCC
Q 002736 698 --------HL------------------GVS-------------------------------IGTIKTKANVCCVQFPLD 720 (886)
Q Consensus 698 --------~~------------------~~~-------------------------------~~~~~~~~~v~~v~~sp~ 720 (886)
.+ +.. +....|...|.+++++.+
T Consensus 305 ~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d 384 (888)
T KOG0306|consen 305 KSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSD 384 (888)
T ss_pred hhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecC
Confidence 00 000 000012234556666655
Q ss_pred CCcEEEEEeCCCeEEEEecCCCCc---------------------------------------ceEEEecCCCCeEEEEe
Q 002736 721 SGRSLAFGSADHRIYYYDLRNSKI---------------------------------------PLCTLIGHNKTVSYVKF 761 (886)
Q Consensus 721 ~~~~l~~gs~Dg~I~vwDlr~~~~---------------------------------------~~~~~~~h~~~V~~v~f 761 (886)
...+++| +.+.+++|+..+.+. .+.+..+|.+++++++.
T Consensus 385 -~~~~~Sg-a~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~ 462 (888)
T KOG0306|consen 385 -SILLASG-AGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISL 462 (888)
T ss_pred -ceeeeec-CCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeee
Confidence 3333333 345566666553321 13345689999999999
Q ss_pred c-CCCEEEEEECCCcEEEEeCCCCCc--cccCC-----CceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCC
Q 002736 762 V-DATTLVSASTDNTLKLWDLSMCTS--RVIDT-----PLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 833 (886)
Q Consensus 762 ~-~~~~l~sgs~Dg~i~lwd~~~~~~--~~~~~-----~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~ 833 (886)
+ |+..++|||.|.+|++||...... ....+ ..+++ .-.+.|.|+.+||||+++|.+=-|++|+||-+.+-+
T Consensus 463 ~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlK 541 (888)
T KOG0306|consen 463 SPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLK 541 (888)
T ss_pred cCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEEcCCCcEEEEEeccCeEEEEEeccee
Confidence 6 999999999999999999864322 00000 01112 135679999999999999999999999999998755
Q ss_pred cceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 834 PALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
-..++ -+|.-+|.|+..+||+. .++||+.|.+||||-+
T Consensus 542 FflsL-------------YGHkLPV~smDIS~DSk-livTgSADKnVKiWGL 579 (888)
T KOG0306|consen 542 FFLSL-------------YGHKLPVLSMDISPDSK-LIVTGSADKNVKIWGL 579 (888)
T ss_pred eeeee-------------cccccceeEEeccCCcC-eEEeccCCCceEEecc
Confidence 44332 46778899999999999 9999999999999954
No 148
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=4.4e-29 Score=279.73 Aligned_cols=240 Identities=14% Similarity=0.175 Sum_probs=160.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ .+. ..+.++++||| .|++|.++|.+. ..+++.+++.|+.||+.||+|||++||+|||||
T Consensus 54 il~~l~h~~iv~~~~-~~~---~~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlk 128 (364)
T cd05599 54 ILAEADNPWVVKLYY-SFQ---DENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIK 128 (364)
T ss_pred HHHhCCCCCCcceEE-EEE---cCCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence 344557899988877 333 35678999999 789999999654 568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+|++|||++............. ...... ..++ + .....+.
T Consensus 129 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--~~~~~~-----------------~~~~-~---------~~~~~~~ 179 (364)
T cd05599 129 PDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR--ILSHAL-----------------PSNF-L---------DFISKPM 179 (364)
T ss_pred HHHeEECCCCCEEEeecccceeccccccccccc--cccccc-----------------cccc-c---------ccccccc
Confidence 999999999999999999987543221100000 000000 0000 0 0000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.... . ...... .........+||++|+|||++.+..++.++|||||||++|||++
T Consensus 180 -~~~~-~------------------~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 180 -SSKR-K------------------AETWKR---NRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred -cccc-c------------------ccchhh---cccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0000 0 000000 00000112479999999999998889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccC--CCChhhhccChhhHHHHHHccCCCCCCCCC---HHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~eil~h~~~~~~ 328 (886)
||............+... ...+.....++.+.+||.+||. +|.+|++ +.|+++||||...
T Consensus 237 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 237 PPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 776554433332222211 1112222356788899999996 9999987 9999999999875
No 149
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-29 Score=251.74 Aligned_cols=187 Identities=19% Similarity=0.258 Sum_probs=157.7
Q ss_pred cccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCcc
Q 002736 51 EAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (886)
Q Consensus 51 ~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~ 129 (886)
....+++|.+||| .||.|.-.|.+ .+.+++..++.|-..|+.||.|||+++||.||||.+|+||+.+|++||+|||+|
T Consensus 237 FQt~drlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLC 315 (516)
T KOG0690|consen 237 FQTQDRLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLC 315 (516)
T ss_pred hccCceEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccc
Confidence 3578999999999 99999998954 478999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccccccc
Q 002736 130 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 209 (886)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (886)
+.-....
T Consensus 316 KE~I~~g------------------------------------------------------------------------- 322 (516)
T KOG0690|consen 316 KEEIKYG------------------------------------------------------------------------- 322 (516)
T ss_pred hhccccc-------------------------------------------------------------------------
Confidence 6432210
Q ss_pred ccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCC
Q 002736 210 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV 286 (886)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~ 286 (886)
....+.||||.|+|||++....|+.++|+|.+||++|||+| ||+........-.++....
T Consensus 323 -----------------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~ 385 (516)
T KOG0690|consen 323 -----------------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL 385 (516)
T ss_pred -----------------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc
Confidence 12345699999999999999999999999999999999999 9977665544444444444
Q ss_pred CChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCCcC
Q 002736 287 LPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (886)
Q Consensus 287 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~~ 330 (886)
..|. ..++++..|+..+|.+||.+|.. +.||.+|+||.....
T Consensus 386 kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 386 KFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred cCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 3333 45689999999999999999954 789999999987654
No 150
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=5.1e-29 Score=279.03 Aligned_cols=204 Identities=20% Similarity=0.227 Sum_probs=153.4
Q ss_pred ceeecccccccCCCCCCccccccc---cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
...+...+|++++..++ ++.... ....+|++|||.+++|.+++.. .+++..+..++.||+.||.|||++||+|
T Consensus 74 ~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH 149 (364)
T cd07875 74 LVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIH 149 (364)
T ss_pred HHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 34455678899888776 443222 3346899999988899998843 4789999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+|||++.++.+||+|||+++..+...
T Consensus 150 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~------------------------------------------------- 180 (364)
T cd07875 150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------- 180 (364)
T ss_pred CCCCHHHEEECCCCcEEEEeCCCccccCCCC-------------------------------------------------
Confidence 9999999999999999999999985432110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......||+.|+|||++.+..++.++|||||||+||||
T Consensus 181 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el 218 (364)
T cd07875 181 ------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218 (364)
T ss_pred ------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHH
Confidence 00112678999999999998899999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCC--------------------------------C--------hhhhccChhhHHHH
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVL--------------------------------P--------PQLLLKFPKEASFC 302 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~--------------------------------~--------~~~~~~~~~~~~li 302 (886)
++ ||............+..... + .........+.+||
T Consensus 219 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll 298 (364)
T cd07875 219 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298 (364)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHH
Confidence 99 77544332221111110000 0 00001124567999
Q ss_pred HHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 303 LWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 303 ~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
.+||..||.+|||+.|+|+||||..
T Consensus 299 ~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 299 SKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHhcCcCcccCCCHHHHhcCccccc
Confidence 9999999999999999999999975
No 151
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.96 E-value=1e-27 Score=250.62 Aligned_cols=264 Identities=20% Similarity=0.282 Sum_probs=216.8
Q ss_pred ecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceE----------EEEecccCCcEEEEEEccCCCCEEEEEeCCC
Q 002736 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV----------LTEMREHERRVWSIDFSSADPTLLASGSDDG 683 (886)
Q Consensus 614 ~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~----------~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg 683 (886)
+.|.+.|+.+...|++..++|+.+..+.|.|||..+... -..+.+|.+.-.+++|++...-.|++|++|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 458899999999999999999999999999999865321 1267899998899999998888999999999
Q ss_pred cEEEEeCchhhhhhc-cCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCC-CCcceEEEecCCCCeEEEEe
Q 002736 684 SVKLWSINQAILLLH-LGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN-SKIPLCTLIGHNKTVSYVKF 761 (886)
Q Consensus 684 ~v~lwd~~~~~~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~-~~~~~~~~~~h~~~V~~v~f 761 (886)
+|.+||++....... .......-.+...|..|+|+|-...+|++++.|+.+.|||+|+ ...+.....+|...|.|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 999999987543211 1112222235677999999999889999999999999999996 33357788899999999999
Q ss_pred c--CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCC-CEEEEEcCCCcEEEEecCCCCcceee
Q 002736 762 V--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD-GYVATGSETNEVFVYHKAFPMPALSF 838 (886)
Q Consensus 762 ~--~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~lasgs~Dg~v~iwd~~~~~~~~~~ 838 (886)
. ++..|||||.|++|+|||+|+.. .+++++.+|...|..|.|||+. ..+|+++.|+.+.|||+..-...++-
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~-----~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ 355 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLN-----KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSP 355 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcc-----cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccCh
Confidence 5 88999999999999999999875 6899999999999999999985 58999999999999999864333221
Q ss_pred ccCCCCCCCCCc--c--ccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 839 NFNHADPLSGPE--T--DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 839 ~~~~~~~~~~~~--~--~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
......+ .+ + .+|...|+.+.|+|..+++++++..|+.+.||+|
T Consensus 356 eda~dgp---pEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~ 403 (422)
T KOG0264|consen 356 EDAEDGP---PELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQM 403 (422)
T ss_pred hhhccCC---cceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeec
Confidence 1111111 11 1 5788899999999999989999999999999987
No 152
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.96 E-value=2e-27 Score=235.45 Aligned_cols=250 Identities=18% Similarity=0.293 Sum_probs=205.0
Q ss_pred EEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECC-CceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeC
Q 002736 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (886)
Q Consensus 612 ~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~-t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~ 690 (886)
...+|.+.|..+.|+| ++..||||++|..|.+|++. ..+....+++|.+.|+.+.|.+ +++.+++|+.|.+|+.||+
T Consensus 42 ~l~gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v~~wD~ 119 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMR-DGSHILSCGTDKTVRGWDA 119 (338)
T ss_pred hcCCCcceEEEEEECC-CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeecc-CCCEEEEecCCceEEEEec
Confidence 3457899999999999 89999999999999999964 3456677889999999999997 9999999999999999999
Q ss_pred chhhhhhccCceeeeeecCC-CeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEE
Q 002736 691 NQAILLLHLGVSIGTIKTKA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLV 768 (886)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~-~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~ 768 (886)
++ ++.+..++.+. .|++++-+.-+..++.+|+.|+++++||+|+.. ++.++. .+-.++++.|. .+..++
T Consensus 120 ~t-------G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~-~~~t~~-~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 120 ET-------GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE-AIKTFE-NKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred cc-------ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc-hhhccc-cceeEEEEEeccccccee
Confidence 99 77777776544 466776444445678889999999999999776 366553 34578999997 788999
Q ss_pred EEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCccee-eccCCCCCCC
Q 002736 769 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALS-FNFNHADPLS 847 (886)
Q Consensus 769 sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~-~~~~~~~~~~ 847 (886)
+|+-|+.|++||++.. ..++++.||...|+.+..+++|.++.+-+.|+++++||+..-.+-.. +... .
T Consensus 191 sggIdn~ikvWd~r~~------d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if-----~ 259 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKN------DGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIF-----Q 259 (338)
T ss_pred eccccCceeeeccccC------cceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEe-----e
Confidence 9999999999999987 45899999999999999999999999999999999999986433222 1100 0
Q ss_pred CCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 848 GPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 848 ~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
++ ...-..-...++|+|++. .+.+|+.|..+++|+-
T Consensus 260 g~-~hnfeknlL~cswsp~~~-~i~ags~dr~vyvwd~ 295 (338)
T KOG0265|consen 260 GH-IHNFEKNLLKCSWSPNGT-KITAGSADRFVYVWDT 295 (338)
T ss_pred cc-hhhhhhhcceeeccCCCC-ccccccccceEEEeec
Confidence 00 011122367889999999 9999999999999983
No 153
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96 E-value=2.6e-29 Score=277.56 Aligned_cols=197 Identities=17% Similarity=0.220 Sum_probs=153.1
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|+++++++. ++. ..+.+|++||| .|++|.+++.+. ..+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 54 ~~p~i~~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nil 128 (330)
T cd05586 54 ESPFIVGLKF-SFQ---TDSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENIL 128 (330)
T ss_pred CCCcCcceEE-EEe---cCCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 6888887666 332 34678999999 789999998654 57899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||++........
T Consensus 129 i~~~~~~kl~Dfg~a~~~~~~~~--------------------------------------------------------- 151 (330)
T cd05586 129 LDATGHIALCDFGLSKANLTDNK--------------------------------------------------------- 151 (330)
T ss_pred ECCCCCEEEecCCcCcCCCCCCC---------------------------------------------------------
Confidence 99999999999999853211100
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc---CCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
.....+||+.|+|||++.+.. ++.++|||||||+||||++ ||.
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~ 198 (330)
T cd05586 152 ---------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198 (330)
T ss_pred ---------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCC
Confidence 001137899999999997654 8999999999999999998 776
Q ss_pred CCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC----CHHHHhcCCCCCCC
Q 002736 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 328 (886)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----s~~eil~h~~~~~~ 328 (886)
....... +..+.............+.+.+|+.+||.+||.+|| ++.++++||||...
T Consensus 199 ~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 199 AEDTQQM-YRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 5544332 233322222111123457788999999999999998 78999999999864
No 154
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.1e-26 Score=284.77 Aligned_cols=278 Identities=15% Similarity=0.238 Sum_probs=216.7
Q ss_pred cccccccccceEEeeecCceEEEE-e--ccCcccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCcccCcccccccc
Q 002736 535 GWINPFLEGLCKYLSFSKLRVKAD-L--NQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYP 610 (886)
Q Consensus 535 ~~~~~~~d~~~~~w~~~~~~~~~~-l--~~~~~~~h~~~V~sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~ 610 (886)
-+++|..|+.|++|++.+...... . .... ..+...|.+++|++ ++.+||+++.|+.|+|||+.+.. ..
T Consensus 497 ~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~-------~~ 568 (793)
T PLN00181 497 FFATAGVNKKIKIFECESIIKDGRDIHYPVVE-LASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQ-------LV 568 (793)
T ss_pred EEEEEeCCCEEEEEECCcccccccccccceEE-ecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCe-------EE
Confidence 356888999999999764211000 0 0001 22456899999997 57899999999999999987521 11
Q ss_pred eEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeC
Q 002736 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (886)
Q Consensus 611 ~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~ 690 (886)
.....|...|.+++|+|.++.+|+||+.||+|++||+.+++.+..+..+ ..|+++.|++.++.+|++|+.||.|++||+
T Consensus 569 ~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~ 647 (793)
T PLN00181 569 TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDL 647 (793)
T ss_pred EEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 2233688999999999877899999999999999999999888888754 689999997657999999999999999999
Q ss_pred chhhhhhccCceeeee-ecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCC-----CcceEEEecCCCCeEEEEec-C
Q 002736 691 NQAILLLHLGVSIGTI-KTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS-----KIPLCTLIGHNKTVSYVKFV-D 763 (886)
Q Consensus 691 ~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~-----~~~~~~~~~h~~~V~~v~f~-~ 763 (886)
++.. ..+..+ .+...|.+++|. + +..|++|+.|++|++||++.. ..++..+.+|...+.+++|+ +
T Consensus 648 ~~~~------~~~~~~~~h~~~V~~v~f~-~-~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~ 719 (793)
T PLN00181 648 RNPK------LPLCTMIGHSKTVSYVRFV-D-SSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVS 719 (793)
T ss_pred CCCC------ccceEecCCCCCEEEEEEe-C-CCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCC
Confidence 8731 123333 356789999997 4 678999999999999999853 23578899999999999997 8
Q ss_pred CCEEEEEECCCcEEEEeCCCCCccc-----cCCCc--eEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEec
Q 002736 764 ATTLVSASTDNTLKLWDLSMCTSRV-----IDTPL--HSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 829 (886)
Q Consensus 764 ~~~l~sgs~Dg~i~lwd~~~~~~~~-----~~~~~--~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~ 829 (886)
+.+|++|+.|++|++|+........ ...++ .....|...|.+++|+|++.+|++|+.||.|+||++
T Consensus 720 ~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 720 DGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 8999999999999999986542100 00001 112345677999999999999999999999999986
No 155
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=4.9e-29 Score=278.81 Aligned_cols=203 Identities=16% Similarity=0.208 Sum_probs=155.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ ++. ..+.+|++||| .|++|.+++.. ..+++..++.++.||+.||+|||++||+|||||
T Consensus 96 i~~~~~hp~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLK 169 (370)
T cd05621 96 IMAFANSPWVVQLFC-AFQ---DDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVK 169 (370)
T ss_pred HHHhCCCCCEeeEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence 344568899988877 333 34678999999 78999999954 358999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+||+|||++.........
T Consensus 170 p~NILl~~~~~~kL~DFG~a~~~~~~~~~--------------------------------------------------- 198 (370)
T cd05621 170 PDNMLLDKHGHLKLADFGTCMKMDETGMV--------------------------------------------------- 198 (370)
T ss_pred HHHEEECCCCCEEEEecccceecccCCce---------------------------------------------------
Confidence 99999999999999999998543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC----CCcccccchHHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFEL 265 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDIwSlGvil~eL 265 (886)
.....+||+.|+|||++.+.. ++.++|||||||+||||
T Consensus 199 --------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyel 240 (370)
T cd05621 199 --------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240 (370)
T ss_pred --------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHH
Confidence 001237899999999997643 78999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccC--CCChhhhccChhhHHHHHHccCCCCCC--CCCHHHHhcCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rps~~eil~h~~~~~~ 328 (886)
++ ||............+... ...+.....++.+.+++.+||..+|.+ |+++.|+++||||+..
T Consensus 241 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 241 LVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 99 886554433333332221 122223345677889999999865543 8999999999999864
No 156
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=6.8e-29 Score=272.56 Aligned_cols=196 Identities=20% Similarity=0.233 Sum_probs=155.6
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++.+++ ++. ..+.+|++||| .|++|..++.+. ..+++.++..++.||+.||.|||++||+||||||+||+
T Consensus 54 ~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil 128 (318)
T cd05570 54 KHPFLTQLHS-CFQ---TKDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVL 128 (318)
T ss_pred CCCCccceee-EEE---cCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeE
Confidence 6888888776 443 34678999999 789999988554 57899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||+++.......
T Consensus 129 l~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------------- 151 (318)
T cd05570 129 LDSEGHIKIADFGMCKEGILGGV--------------------------------------------------------- 151 (318)
T ss_pred ECCCCcEEecccCCCeecCcCCC---------------------------------------------------------
Confidence 99999999999999843211000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
.....+||+.|+|||.+.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~ 198 (318)
T cd05570 152 ---------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG 198 (318)
T ss_pred ---------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC
Confidence 0112368999999999999899999999999999999998 7755
Q ss_pred CchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH-----HHHhcCCCCCCC
Q 002736 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (886)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~eil~h~~~~~~ 328 (886)
................ .+...++.+.+|+.+||..||.+||++ .++++||||...
T Consensus 199 ~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 199 DDEDELFQSILEDEVR--YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CCHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 4443332222222221 222355778899999999999999999 999999999864
No 157
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=3.7e-29 Score=275.63 Aligned_cols=200 Identities=19% Similarity=0.214 Sum_probs=157.3
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++..+. ++. ..+.++++||| .|++|..++.+. ..+++.+++.++.||+.||+|||++||+||||||
T Consensus 50 l~~~~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp 124 (325)
T cd05604 50 LKNVKHPFLVGLHY-SFQ---TTEKLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDLKP 124 (325)
T ss_pred HHhCCCCCCccEEE-EEe---cCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence 45578899988776 332 35678999999 889999988554 5789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||+++.......
T Consensus 125 ~NIll~~~~~~kL~DfG~~~~~~~~~~----------------------------------------------------- 151 (325)
T cd05604 125 ENILLDSQGHVVLTDFGLCKEGIAQSD----------------------------------------------------- 151 (325)
T ss_pred HHeEECCCCCEEEeecCCcccCCCCCC-----------------------------------------------------
Confidence 999999999999999999853211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~ 194 (325)
T cd05604 152 -------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred -------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCC
Confidence 0112378999999999999889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH----HHHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~----~eil~h~~~~~~ 328 (886)
||......... ..+..... ......+..+.+++.+||..+|.+||++ .+++.||||...
T Consensus 195 pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 195 PFYCRDVAEMY-DNILHKPL-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCHHHHH-HHHHcCCc-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 77655443333 33322221 1122356778899999999999999876 589999999864
No 158
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=5.8e-27 Score=259.68 Aligned_cols=321 Identities=16% Similarity=0.255 Sum_probs=248.3
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecC
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~ 616 (886)
+++.-+|.|++|||.=+..+.. +..|.++|+.++|+|.+.+|++||.|-+||||++... .+.....+|
T Consensus 25 LtslHsG~IQlWDYRM~tli~r-----FdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r-------rclftL~GH 92 (1202)
T KOG0292|consen 25 LTSLHSGVIQLWDYRMGTLIDR-----FDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR-------RCLFTLLGH 92 (1202)
T ss_pred EEeecCceeeeehhhhhhHHhh-----hhccCCccceeeecCCCCeEEecCCccEEEEEecccc-------eehhhhccc
Confidence 5566789999999986655533 3679999999999999999999999999999999763 233345679
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhh
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~ 696 (886)
-.-|..+.|++ .-..|+|+|.|-+|+||+.++++++..+.+|..-|+|..|+| ...+++|+|-|.+|++||+..-...
T Consensus 93 lDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp-tEDlIVSaSLDQTVRVWDisGLRkk 170 (1202)
T KOG0292|consen 93 LDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP-TEDLIVSASLDQTVRVWDISGLRKK 170 (1202)
T ss_pred cceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC-ccceEEEecccceEEEEeecchhcc
Confidence 99999999998 678999999999999999999999999999999999999999 7889999999999999998542110
Q ss_pred h------------------ccCc---ee-eeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCc-ceEEEecC
Q 002736 697 L------------------HLGV---SI-GTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI-PLCTLIGH 752 (886)
Q Consensus 697 ~------------------~~~~---~~-~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~-~~~~~~~h 752 (886)
. -++. .+ ..+. |...|+-++|+|. -.+|++|+.|..|++|.+...+. .+.++.||
T Consensus 171 ~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpT-lpliVSG~DDRqVKlWrmnetKaWEvDtcrgH 249 (1202)
T KOG0292|consen 171 NKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTCRGH 249 (1202)
T ss_pred CCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCC-cceEEecCCcceeeEEEeccccceeehhhhcc
Confidence 0 0111 01 1111 3456999999998 67999999999999999876542 45678999
Q ss_pred CCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCC
Q 002736 753 NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 831 (886)
Q Consensus 753 ~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~ 831 (886)
...|+++-|+ ..++++|.|.|++|++||+... .++++|+.-...-+.++-+|..+.+|+|-..| +.||-+..
T Consensus 250 ~nnVssvlfhp~q~lIlSnsEDksirVwDm~kR------t~v~tfrrendRFW~laahP~lNLfAAgHDsG-m~VFkleR 322 (1202)
T KOG0292|consen 250 YNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKR------TSVQTFRRENDRFWILAAHPELNLFAAGHDSG-MIVFKLER 322 (1202)
T ss_pred cCCcceEEecCccceeEecCCCccEEEEecccc------cceeeeeccCCeEEEEEecCCcceeeeecCCc-eEEEEEcc
Confidence 9999999997 7789999999999999999887 45899988788899999999999888876444 55665553
Q ss_pred CC----------------cceeeccCCCCCCCCCcc---ccCCCcEEEEEEccCCCcEEEEEeCCCC
Q 002736 832 PM----------------PALSFNFNHADPLSGPET---DDAAQFISSVCWRGQSSNTLVAANSSGN 879 (886)
Q Consensus 832 ~~----------------~~~~~~~~~~~~~~~~~~---~~~~~~V~~v~~s~~~~~~l~s~~~dg~ 879 (886)
.. .+..+.|........... ....+++.++.++|....+|++.+-|+.
T Consensus 323 Erpa~~v~~n~LfYvkd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~ 389 (1202)
T KOG0292|consen 323 ERPAYAVNGNGLFYVKDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNG 389 (1202)
T ss_pred cCceEEEcCCEEEEEccceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCC
Confidence 22 233333332111111111 1124678889999987745566554443
No 159
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.4e-27 Score=226.90 Aligned_cols=241 Identities=18% Similarity=0.281 Sum_probs=211.9
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhh
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~ 694 (886)
.+.++|..+.||- ++++.++++.|.+|++|+...+.+++++.+|...|..++.+. +...|++|+.|..|.+||+++
T Consensus 15 ~~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~T-- 90 (307)
T KOG0316|consen 15 CAQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNT-- 90 (307)
T ss_pred ccccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccc-cccccccCCCCceEEEEEccc--
Confidence 4778999999998 799999999999999999999999999999999999999986 889999999999999999999
Q ss_pred hhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC-cceEEEecCCCCeEEEEecCCCEEEEEEC
Q 002736 695 LLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-IPLCTLIGHNKTVSYVKFVDATTLVSAST 772 (886)
Q Consensus 695 ~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~-~~~~~~~~h~~~V~~v~f~~~~~l~sgs~ 772 (886)
++.+..+.+ .+.|+.|+|+.+ ...+++|+.|.++++||-|... .|++.+..-...|.+|... +..|++||.
T Consensus 91 -----Gkv~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-~heIvaGS~ 163 (307)
T KOG0316|consen 91 -----GKVDRRFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-EHEIVAGSV 163 (307)
T ss_pred -----CeeeeecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec-ccEEEeecc
Confidence 777777765 567999999998 7899999999999999998754 4788888888999999985 678999999
Q ss_pred CCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccc
Q 002736 773 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETD 852 (886)
Q Consensus 773 Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 852 (886)
||+++.||++.+.. .--+ -..+|++++|+++++....++.|+++++-|..+++.+.+++-..
T Consensus 164 DGtvRtydiR~G~l------~sDy--~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhk---------- 225 (307)
T KOG0316|consen 164 DGTVRTYDIRKGTL------SSDY--FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHK---------- 225 (307)
T ss_pred CCcEEEEEeeccee------ehhh--cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccc----------
Confidence 99999999998842 2223 34579999999999999999999999999999999998776322
Q ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEeC
Q 002736 853 DAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 886 (886)
Q Consensus 853 ~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l~ 886 (886)
+..+-..+|++.... .+++|+.||.|.+|+|+
T Consensus 226 -n~eykldc~l~qsdt-hV~sgSEDG~Vy~wdLv 257 (307)
T KOG0316|consen 226 -NMEYKLDCCLNQSDT-HVFSGSEDGKVYFWDLV 257 (307)
T ss_pred -cceeeeeeeecccce-eEEeccCCceEEEEEec
Confidence 234566778887777 89999999999999985
No 160
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=5.5e-29 Score=278.22 Aligned_cols=206 Identities=19% Similarity=0.231 Sum_probs=153.3
Q ss_pred CceeecccccccCCCCCCccccccc---cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
+...+...+|++++..++ ++.... ....+|++|||.+++|.+++.. .+++..+..++.||+.||.|||++||+
T Consensus 70 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~iv 145 (359)
T cd07876 70 ELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGII 145 (359)
T ss_pred HHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 344556678999988776 443322 2245799999988888888743 478999999999999999999999999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
||||||+|||++.++.+||+|||+++......
T Consensus 146 HrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------------ 177 (359)
T cd07876 146 HRDLKPSNIVVKSDCTLKILDFGLARTACTNF------------------------------------------------ 177 (359)
T ss_pred cCCCCHHHEEECCCCCEEEecCCCccccccCc------------------------------------------------
Confidence 99999999999999999999999985321110
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~e 264 (886)
......||+.|+|||.+.+..++.++|||||||++||
T Consensus 178 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 214 (359)
T cd07876 178 -------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 214 (359)
T ss_pred -------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHH
Confidence 0011267899999999999889999999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhc----------------------cC-CCC--------h---------hhhccChhhHHH
Q 002736 265 LFC---PFSTGEEKTRTMSSLR----------------------HR-VLP--------P---------QLLLKFPKEASF 301 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~----------------------~~-~~~--------~---------~~~~~~~~~~~l 301 (886)
|++ ||............+. .. ..+ + ......+.+.+|
T Consensus 215 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 294 (359)
T cd07876 215 LVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDL 294 (359)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHH
Confidence 999 7754432211100000 00 000 0 000123567899
Q ss_pred HHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 302 CLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 302 i~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|.+||.+||.+|||+.|+|+||||...
T Consensus 295 i~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 295 LSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHhccCcccCCCHHHHhcCchhhhh
Confidence 999999999999999999999998753
No 161
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.5e-29 Score=276.45 Aligned_cols=205 Identities=19% Similarity=0.218 Sum_probs=175.8
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccC--e
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--I 103 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g--i 103 (886)
.+.-.|...+|+|++++|. .+.+... ..+.++.|+ ..|+|++|+++. +.++...++.+++||+.||.|||++. |
T Consensus 90 ~Ev~lLKsL~H~NIirfy~-SW~d~~n-~~in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPI 166 (632)
T KOG0584|consen 90 SEVHLLKSLKHPNIIRFYD-SWVDTDN-KTINFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPI 166 (632)
T ss_pred HHHHHHccCCCCceeeeee-heecCCC-ceeeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCc
Confidence 3444556689999999999 6766554 556666666 999999999776 68899999999999999999999995 9
Q ss_pred eecccCCcceeec-cCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 104 VVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 104 iHrDlkP~NIll~-~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
||||||.+||+|+ .-|.|||+|+|+|......
T Consensus 167 IHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s----------------------------------------------- 199 (632)
T KOG0584|consen 167 IHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS----------------------------------------------- 199 (632)
T ss_pred cccccccceEEEcCCcCceeecchhHHHHhhcc-----------------------------------------------
Confidence 9999999999998 6799999999999543211
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil 262 (886)
+....+|||.|||||.+. ..|+..+||||||+.+
T Consensus 200 ---------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCm 233 (632)
T KOG0584|consen 200 ---------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCM 233 (632)
T ss_pred ---------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHH
Confidence 122259999999999997 4599999999999999
Q ss_pred HHHhc---CCCCCchhhHHhHhhccCCCChhhhc-cChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.||+| ||..+......++.+..+..|..+.. ..|+.++||.+||.. .+.|||+.|+|+||||...
T Consensus 234 LEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 234 LEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 99999 99999999999999999988877654 468899999999999 9999999999999999975
No 162
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=5.6e-29 Score=274.28 Aligned_cols=198 Identities=16% Similarity=0.233 Sum_probs=152.3
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
.|++++.++. ++. ..+.+|++||| .|++|.+++.+. +.+++.+++.|+.||+.||.|||++||+||||||+|||
T Consensus 54 ~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nil 128 (327)
T cd05617 54 SNPFLVGLHS-CFQ---TTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVL 128 (327)
T ss_pred CCCCEeeEEE-EEE---eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 5777777665 332 34678999999 789999988544 57899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||+++.......
T Consensus 129 i~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------------- 151 (327)
T cd05617 129 LDADGHIKLTDYGMCKEGLGPGD--------------------------------------------------------- 151 (327)
T ss_pred EeCCCCEEEeccccceeccCCCC---------------------------------------------------------
Confidence 99999999999999853211000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
.....+||+.|+|||.+.+..++.++|||||||+||||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 152 ---------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred ---------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 0112378999999999999889999999999999999999 7742
Q ss_pred Cc------hhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC------HHHHhcCCCCCCCc
Q 002736 272 GE------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPR 329 (886)
Q Consensus 272 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps------~~eil~h~~~~~~~ 329 (886)
.. ........+.... ...+...++.+.+++.+||.+||.+|++ +.+++.||||....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 199 ITDNPDMNTEDYLFQVILEKP-IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred cCCCcccccHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 21 1111222222221 1222345577889999999999999998 57999999998754
No 163
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=4.4e-29 Score=284.12 Aligned_cols=206 Identities=16% Similarity=0.183 Sum_probs=155.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+.+.+|+|++.+++ ++. ..+..+++||+..++|.+++......+++.+++.|+.||+.||.|||++||||||||
T Consensus 212 ~iL~~L~HpnIv~l~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLK 287 (461)
T PHA03211 212 RLLRRLSHPAVLALLD-VRV---VGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIK 287 (461)
T ss_pred HHHHHCCCCCCCcEEE-EEE---ECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCC
Confidence 3455678999998877 443 346788899997889999997655679999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||||+.++.+||+|||+++........
T Consensus 288 P~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------------------------- 316 (461)
T PHA03211 288 TENVLVNGPEDICLGDFGAACFARGSWST--------------------------------------------------- 316 (461)
T ss_pred HHHEEECCCCCEEEcccCCceeccccccc---------------------------------------------------
Confidence 99999999999999999998543111000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 317 -------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~ 359 (461)
T PHA03211 317 -------------------------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHT 359 (461)
T ss_pred -------------------------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcC
Confidence 00011378999999999999889999999999999999986
Q ss_pred -CCCCCch-------hhHHhHhhccC-----CCC-------------------------h---hhhccChhhHHHHHHcc
Q 002736 268 -PFSTGEE-------KTRTMSSLRHR-----VLP-------------------------P---QLLLKFPKEASFCLWLL 306 (886)
Q Consensus 268 -pf~~~~~-------~~~~~~~~~~~-----~~~-------------------------~---~~~~~~~~~~~li~~~L 306 (886)
+++.... .......+... .++ + ......+.+.+||.+||
T Consensus 360 ~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 439 (461)
T PHA03211 360 ASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRAL 439 (461)
T ss_pred CCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHc
Confidence 3433211 11111111110 000 0 01122346779999999
Q ss_pred CCCCCCCCCHHHHhcCCCCCC
Q 002736 307 HPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 307 ~~dP~~Rps~~eil~h~~~~~ 327 (886)
..||.+|||+.|+|+||||+.
T Consensus 440 ~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 440 TFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccChhhCcCHHHHhhCcccCC
Confidence 999999999999999999974
No 164
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=6.2e-29 Score=273.57 Aligned_cols=183 Identities=19% Similarity=0.293 Sum_probs=147.1
Q ss_pred CCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCC
Q 002736 54 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (886)
Q Consensus 54 ~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~ 132 (886)
.+.++++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 4678999999 789999998554 56899999999999999999999999999999999999999999999999998532
Q ss_pred CCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccc
Q 002736 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (886)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (886)
.....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (323)
T cd05616 152 MWDGV--------------------------------------------------------------------------- 156 (323)
T ss_pred CCCCC---------------------------------------------------------------------------
Confidence 11100
Q ss_pred cccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCCh
Q 002736 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (886)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~ 289 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||..................
T Consensus 157 ---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 219 (323)
T cd05616 157 ---------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-- 219 (323)
T ss_pred ---------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--
Confidence 0112378999999999999899999999999999999999 77655444333333322221
Q ss_pred hhhccChhhHHHHHHccCCCCCCCCCH-----HHHhcCCCCCCCc
Q 002736 290 QLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPR 329 (886)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rps~-----~eil~h~~~~~~~ 329 (886)
.+...++++.+++.+||..+|.+|+++ .++++||||....
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 223456788899999999999999974 8999999998653
No 165
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-29 Score=258.09 Aligned_cols=202 Identities=18% Similarity=0.221 Sum_probs=144.6
Q ss_pred cCCceEEEEeeCCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCcc-C
Q 002736 53 AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC-S 130 (886)
Q Consensus 53 ~~~~~~i~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~-~ 130 (886)
-.++.||+.|..|.|+.++|+++ ..+++...+++|..||+++|.|||+.+++|.||||+|||+.++..++.-+-+.. .
T Consensus 162 yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 162 YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 35788999999999999999764 467999999999999999999999999999999999999977665554333221 0
Q ss_pred CCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccc
Q 002736 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (886)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (886)
... ..+...++.-|||.++....
T Consensus 242 ~~r--------------------------~~ks~~I~vIDFGsAtf~~e------------------------------- 264 (415)
T KOG0671|consen 242 FIR--------------------------PLKSTAIKVIDFGSATFDHE------------------------------- 264 (415)
T ss_pred eec--------------------------cCCCcceEEEecCCcceecc-------------------------------
Confidence 000 00001122233333322110
Q ss_pred cccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCc--hhhHHhHhhccC
Q 002736 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE--EKTRTMSSLRHR 285 (886)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~--~~~~~~~~~~~~ 285 (886)
.....+.|..|+|||++.+-+++..+||||+||||+||.+ -|.+.+ ++-+.|..+..
T Consensus 265 -----------------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG- 326 (415)
T KOG0671|consen 265 -----------------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG- 326 (415)
T ss_pred -----------------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-
Confidence 1244588999999999999999999999999999999999 444444 44444544433
Q ss_pred CCChhhhc-------------------------------------------cChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 286 VLPPQLLL-------------------------------------------KFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 286 ~~~~~~~~-------------------------------------------~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
++|..... ...++.+|+.+||.+||.+|+|+.|+|.|
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 22211100 01134599999999999999999999999
Q ss_pred CCCCCCc
Q 002736 323 EFLNEPR 329 (886)
Q Consensus 323 ~~~~~~~ 329 (886)
|||+...
T Consensus 407 pFF~~~~ 413 (415)
T KOG0671|consen 407 PFFARLT 413 (415)
T ss_pred HHhhcCC
Confidence 9998653
No 166
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=4.6e-29 Score=277.13 Aligned_cols=207 Identities=15% Similarity=0.207 Sum_probs=155.4
Q ss_pred CceeecccccccCCCCCCcccccc---ccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
+...+.+.+|++++..+. ++... .....+|++||+.|++|.++++. ..+++.+++.++.||+.||.|||++||+
T Consensus 64 E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~iv 140 (343)
T cd07878 64 ELRLLKHMKHENVIGLLD-VFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGII 140 (343)
T ss_pred HHHHHHhcCCCchhhhhh-hhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344556678888888776 44322 12345799999999999998854 4689999999999999999999999999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
||||||+|||++.++.+||+|||+++.....
T Consensus 141 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------- 171 (343)
T cd07878 141 HRDLKPSNVAVNEDCELRILDFGLARQADDE------------------------------------------------- 171 (343)
T ss_pred cccCChhhEEECCCCCEEEcCCccceecCCC-------------------------------------------------
Confidence 9999999999999999999999998532110
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~ 263 (886)
....+||++|+|||++.+ ..++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 207 (343)
T cd07878 172 --------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 207 (343)
T ss_pred --------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHH
Confidence 011368999999999977 45899999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhc--cCC----------------------CC-----hhhhccChhhHHHHHHccCCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMSSLR--HRV----------------------LP-----PQLLLKFPKEASFCLWLLHPEPS 311 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~--~~~----------------------~~-----~~~~~~~~~~~~li~~~L~~dP~ 311 (886)
||++ ||.............. ... .+ ..+....+.+.+|+.+||..||.
T Consensus 208 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~ 287 (343)
T cd07878 208 ELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSD 287 (343)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChh
Confidence 9999 6644332211111100 000 00 01122345577999999999999
Q ss_pred CCCCHHHHhcCCCCCCCcC
Q 002736 312 GRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 312 ~Rps~~eil~h~~~~~~~~ 330 (886)
+|||+.|+|+||||.....
T Consensus 288 ~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 288 KRISASEALAHPYFSQYHD 306 (343)
T ss_pred hCCCHHHHhcCcchhccCC
Confidence 9999999999999987543
No 167
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.2e-27 Score=249.48 Aligned_cols=264 Identities=23% Similarity=0.311 Sum_probs=224.5
Q ss_pred ccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCee
Q 002736 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (886)
Q Consensus 542 d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~ 621 (886)
.-.+.+++..+..+..++ ..-+..|+++.|-.||+++|+|+..|.|+|||..+.. ..-...+|..+|.
T Consensus 47 S~rvqly~~~~~~~~k~~-----srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~-------iLR~~~ah~apv~ 114 (487)
T KOG0310|consen 47 SVRVQLYSSVTRSVRKTF-----SRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRV-------ILRQLYAHQAPVH 114 (487)
T ss_pred ccEEEEEecchhhhhhhH-----HhhccceeEEEeecCCeEEEccCCcCcEEEeccccHH-------HHHHHhhccCcee
Confidence 456788887776655444 2347799999999999999999999999999965410 0112236899999
Q ss_pred eEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCc
Q 002736 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGV 701 (886)
Q Consensus 622 ~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~ 701 (886)
.+.|+|+++.++++|+.|+.+++||+.+......+.+|++.|.|.+|+|.++.+++|||.||+|++||++.. ..
T Consensus 115 ~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~------~~ 188 (487)
T KOG0310|consen 115 VTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSL------TS 188 (487)
T ss_pred EEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccC------Cc
Confidence 999999999999999999999999999998877899999999999999988999999999999999999983 37
Q ss_pred eeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEe
Q 002736 702 SIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWD 780 (886)
Q Consensus 702 ~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd 780 (886)
.+..+.+..+|-.|.+-|. |..||+++ .+.|++||+.++.+.+..+..|.+.|+|+++. ++..|+|||-|+.+++||
T Consensus 189 ~v~elnhg~pVe~vl~lps-gs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd 266 (487)
T KOG0310|consen 189 RVVELNHGCPVESVLALPS-GSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFD 266 (487)
T ss_pred eeEEecCCCceeeEEEcCC-CCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEE
Confidence 7888999999999999999 78888876 46799999998776566676799999999996 889999999999999999
Q ss_pred CCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCC
Q 002736 781 LSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 832 (886)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~ 832 (886)
+.+.+ .++++ ...++|.+++++|+++.++.|..||.+.+=+....
T Consensus 267 ~t~~K------vv~s~-~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k 311 (487)
T KOG0310|consen 267 TTNYK------VVHSW-KYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVK 311 (487)
T ss_pred ccceE------EEEee-ecccceeeEEecCCCceEEEecccceeeeehhhcc
Confidence 77653 34444 36789999999999999999999999988855443
No 168
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.96 E-value=4.9e-27 Score=267.09 Aligned_cols=274 Identities=21% Similarity=0.361 Sum_probs=237.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd 646 (886)
|...+.+..|. +.++++++.+++|++|+...... ......+|.+.|.++++.. .+..+++|+.|.++++||
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~------i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd 277 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYL------ILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWD 277 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceE------EEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEe
Confidence 56677888888 56899999999999999876311 1122457999999999986 689999999999999999
Q ss_pred CCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEE
Q 002736 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSL 725 (886)
Q Consensus 647 ~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l 725 (886)
+.++++...+.+|...|.+++.. +..+++|+.|.+|++|++.+ +..+..+. +.+.|+||..+ +.++
T Consensus 278 ~~sg~C~~~l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n-------~~~l~l~~~h~~~V~~v~~~---~~~l 344 (537)
T KOG0274|consen 278 CSTGECTHSLQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTN-------GACLNLLRGHTGPVNCVQLD---EPLL 344 (537)
T ss_pred cCCCcEEEEecCCCceEEEEEcc---CceEeeccCCceEEEEeccC-------cceEEEeccccccEEEEEec---CCEE
Confidence 99999999999999999999876 47889999999999999998 88888888 88999999998 5699
Q ss_pred EEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeE
Q 002736 726 AFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 805 (886)
Q Consensus 726 ~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 805 (886)
++|+.|++|.+||+++.+ ++.++.+|..+|.++.+.....+++|+.|++|++||+++.. +++.++.+|...+..
T Consensus 345 vsgs~d~~v~VW~~~~~~-cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~-----~c~~tl~~h~~~v~~ 418 (537)
T KOG0274|consen 345 VSGSYDGTVKVWDPRTGK-CLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKR-----KCIHTLQGHTSLVSS 418 (537)
T ss_pred EEEecCceEEEEEhhhce-eeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchh-----hhhhhhcCCcccccc
Confidence 999999999999999888 59999999999999977533999999999999999999872 358999999999865
Q ss_pred EEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 806 VGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 806 v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
+.+ .+++|++++.|++|++||...++.+..+... |...|+++++. .. .+++++.||++++|++
T Consensus 419 l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~------------~~~~v~~l~~~--~~-~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 419 LLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGR------------HVGGVSALALG--KE-EILCSSDDGSVKLWDL 481 (537)
T ss_pred ccc--ccceeEeccccccEEEeecccCceeeeeccC------------CcccEEEeecC--cc-eEEEEecCCeeEEEec
Confidence 544 6789999999999999999999988765421 44669999887 44 8999999999999986
No 169
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=7.6e-26 Score=226.89 Aligned_cols=278 Identities=18% Similarity=0.260 Sum_probs=228.4
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecC--CCcEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF--EGVVQV 644 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~--Dg~V~i 644 (886)
-...|.++.|+++|+++++++.|..|+|||...... ......++..|..++|... .+.++.++. |.+|+.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~-------~~ti~skkyG~~~~~Fth~-~~~~i~sStk~d~tIry 84 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQ-------VKTINSKKYGVDLACFTHH-SNTVIHSSTKEDDTIRY 84 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCce-------eeEeecccccccEEEEecC-CceEEEccCCCCCceEE
Confidence 477899999999999999999999999999876311 1122235567888899764 444444444 899999
Q ss_pred EECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcE
Q 002736 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRS 724 (886)
Q Consensus 645 Wd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 724 (886)
-++.+++.++-|.+|.+.|++++.+| -++.+++++.|++|++||++. ..+...+..... ..++|+|. |-+
T Consensus 85 Lsl~dNkylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~-------~~cqg~l~~~~~-pi~AfDp~-GLi 154 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRV-------KKCQGLLNLSGR-PIAAFDPE-GLI 154 (311)
T ss_pred EEeecCceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecC-------CCCceEEecCCC-cceeECCC-CcE
Confidence 99999999999999999999999999 569999999999999999998 566665554443 56799999 899
Q ss_pred EEEEeCCCeEEEEecCCC-CcceEEEecC---CCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 725 LAFGSADHRIYYYDLRNS-KIPLCTLIGH---NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 725 l~~gs~Dg~I~vwDlr~~-~~~~~~~~~h---~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
+|+|.....|++||+|.. +.|..++.-. ....+.+.|+ +|++|+.+...+.+.+.|--.+ ..+.++.++
T Consensus 155 fA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G------~~~~tfs~~ 228 (311)
T KOG1446|consen 155 FALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG------TVKSTFSGY 228 (311)
T ss_pred EEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC------cEeeeEeec
Confidence 999998889999999986 5567766543 6778999998 9999999999999999999887 357888888
Q ss_pred CCce---eEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeC
Q 002736 800 TNVK---NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANS 876 (886)
Q Consensus 800 ~~~v---~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~ 876 (886)
.+.- ....|+|++++|++|+.||+|.+|++.+++.+..+.-. +.+.+.++.|+|... ++|+|++
T Consensus 229 ~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~------------~~~~~~~~~fnP~~~-mf~sa~s 295 (311)
T KOG1446|consen 229 PNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP------------NGGPVSCVRFNPRYA-MFVSASS 295 (311)
T ss_pred cCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC------------CCCCccccccCCcee-eeeecCc
Confidence 7654 56789999999999999999999999999888766421 456689999999987 7777754
Q ss_pred CCCEEEE
Q 002736 877 SGNIKIL 883 (886)
Q Consensus 877 dg~I~iw 883 (886)
.+-+|
T Consensus 296 --~l~fw 300 (311)
T KOG1446|consen 296 --NLVFW 300 (311)
T ss_pred --eEEEE
Confidence 56666
No 170
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=7e-29 Score=279.26 Aligned_cols=249 Identities=13% Similarity=0.151 Sum_probs=159.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+.+.+|++++.+++ ++. ..+.+|++||| .|++|.+++.+. +.+++..++.++.||+.||+|||++||+|||||
T Consensus 54 il~~l~hp~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlk 128 (377)
T cd05629 54 VLAESDSPWVVSLYY-SFQ---DAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIK 128 (377)
T ss_pred HHHhCCCCCcceEEE-EEE---cCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 345578999988777 333 35679999999 789999999654 578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+|++|||+++.+......... .......... .+. ..+.............
T Consensus 129 p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~--~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~------------- 189 (377)
T cd05629 129 PDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY--QKLLQGKSNK-NRI---DNRNSVAVDSINLTMS------------- 189 (377)
T ss_pred HHHEEECCCCCEEEeecccccccccccccccc--cccccccccc-ccc---cccccccccccccccc-------------
Confidence 99999999999999999999644221100000 0000000000 000 0000000000000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.. .++.+.+ ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 190 -----~~---------~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~ 245 (377)
T cd05629 190 -----SK---------DQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGW 245 (377)
T ss_pred -----ch---------hhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCC
Confidence 00 0000000 000001112479999999999998889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhc--cCCCChhhhccChhhHHHHHHccCCCCCCC---CCHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---ps~~eil~h~~~~~~ 328 (886)
||.............. .....+.....++.+.+||.+||. +|.+| +++.|+++||||...
T Consensus 246 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 246 PPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred CCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 7755444332222221 111122223456788899999997 67665 699999999999864
No 171
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=275.24 Aligned_cols=203 Identities=20% Similarity=0.207 Sum_probs=170.1
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCc--ChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l--~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
-++..|+|+++++|. ..+.+.|-|.||- .||+|..+|+..=+++ ++..+-.|.+||++||.|||.+.||||||
T Consensus 626 H~~LrHkNIVrYLGs----~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDI 701 (1226)
T KOG4279|consen 626 HSTLRHKNIVRYLGS----VSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDI 701 (1226)
T ss_pred HHHHhhHhHHHHhhc----cCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccc
Confidence 355789999998882 2346788899998 9999999997766677 89999999999999999999999999999
Q ss_pred CCcceeec-cCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 109 RPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 109 kP~NIll~-~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|-+|+|++ .+|.+||.|||.++.+..- .+
T Consensus 702 KGDNVLvNTySGvlKISDFGTsKRLAgi------------------------------------------------nP-- 731 (1226)
T KOG4279|consen 702 KGDNVLVNTYSGVLKISDFGTSKRLAGI------------------------------------------------NP-- 731 (1226)
T ss_pred cCCcEEEeeccceEEecccccchhhccC------------------------------------------------Cc--
Confidence 99999997 8899999999998654110 00
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC--CCcccccchHHHHHHHH
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFEL 265 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDIwSlGvil~eL 265 (886)
.+.++.||..|||||++..++ |+.++|||||||++.||
T Consensus 732 ----------------------------------------~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEM 771 (1226)
T KOG4279|consen 732 ----------------------------------------CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEM 771 (1226)
T ss_pred ----------------------------------------cccccccchhhhChHhhccCCcCCCchhhhhhccceeEee
Confidence 122358999999999998765 99999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhc-cCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.| ||..-....++|..+- ...-|+.+...+.+++.||.+|+.+||.+||+|.++|+.||++..
T Consensus 772 ATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 772 ATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 99 7866656666665543 455577777778889999999999999999999999999999865
No 172
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=2.6e-29 Score=276.00 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=160.1
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
+...+.+.+|++++.+++ ++. ..+.+|++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++||+||
T Consensus 48 E~~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 122 (318)
T cd05582 48 ERDILAEVNHPFIVKLHY-AFQ---TEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYR 122 (318)
T ss_pred HHHHHHhCCCCCcccEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 334566778999988776 443 34678999999 789999999654 568999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+|||++.++.+||+|||++........
T Consensus 123 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------- 153 (318)
T cd05582 123 DLKPENILLDEEGHIKLTDFGLSKESIDHEK------------------------------------------------- 153 (318)
T ss_pred CCCHHHeEECCCCcEEEeeccCCcccCCCCC-------------------------------------------------
Confidence 9999999999999999999999853311100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 154 -----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 192 (318)
T cd05582 154 -----------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 192 (318)
T ss_pred -----------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeec
Confidence 011237899999999999888999999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCC
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~ 328 (886)
+ ||................. ..+....+.+.+|+.+||+.||.+||+ +.+++.||||...
T Consensus 193 tg~~p~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 193 TGSLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 9 7755443333322222221 122235577889999999999999999 6779999999864
No 173
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=1e-28 Score=272.04 Aligned_cols=200 Identities=18% Similarity=0.211 Sum_probs=156.8
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++.++. ++. ..+.++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||
T Consensus 50 l~~~~h~~Iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp 124 (325)
T cd05602 50 LKNVKHPFLVGLHF-SFQ---TADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKP 124 (325)
T ss_pred HHhCCCCCCCceeE-EEE---cCCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence 45568888888766 332 34678999999 788999999654 5688999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||+++.......
T Consensus 125 ~Nili~~~~~~kl~DfG~a~~~~~~~~----------------------------------------------------- 151 (325)
T cd05602 125 ENILLDSQGHIVLTDFGLCKENIEHNG----------------------------------------------------- 151 (325)
T ss_pred HHeEECCCCCEEEccCCCCcccccCCC-----------------------------------------------------
Confidence 999999999999999999853211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (325)
T cd05602 152 -------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred -------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCC
Confidence 0112378999999999999889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHH----HHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~----eil~h~~~~~~ 328 (886)
||....... .+..+..... .......+.+.+++.+||+.+|.+||++. ++++|+||...
T Consensus 195 pf~~~~~~~-~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 195 PFYSRNTAE-MYDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCHHH-HHHHHHhCCc-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 776544333 3333332221 12234567888999999999999999875 89999999764
No 174
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=1.5e-28 Score=272.51 Aligned_cols=195 Identities=17% Similarity=0.231 Sum_probs=149.4
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC--------------------------------------
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------------------- 76 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-------------------------------------- 76 (886)
+|+|++.+++ +|.. ..+.++++||| .|++|.++|....
T Consensus 69 ~h~niv~~~~-~~~~--~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (338)
T cd05102 69 NHLNVVNLLG-ACTK--PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVL 145 (338)
T ss_pred cCcceeeEEe-EecC--CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcc
Confidence 7888888776 5543 34568889999 8899999985421
Q ss_pred -----------------------CCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCC
Q 002736 77 -----------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (886)
Q Consensus 77 -----------------------~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~ 133 (886)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+|++|||+++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~ 225 (338)
T cd05102 146 FSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY 225 (338)
T ss_pred ccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccc
Confidence 247788999999999999999999999999999999999999999999999986432
Q ss_pred CCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccccccccccc
Q 002736 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (886)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (886)
.....
T Consensus 226 ~~~~~--------------------------------------------------------------------------- 230 (338)
T cd05102 226 KDPDY--------------------------------------------------------------------------- 230 (338)
T ss_pred cCcch---------------------------------------------------------------------------
Confidence 11000
Q ss_pred ccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCCh
Q 002736 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPP 289 (886)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~ 289 (886)
.......++..|+|||++.+..++.++|||||||+||||++ ||............+.....+.
T Consensus 231 -------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~ 297 (338)
T cd05102 231 -------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR 297 (338)
T ss_pred -------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC
Confidence 00001145677999999998889999999999999999985 6654433333334444433333
Q ss_pred hhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
.....++.+.+++.+||..||.+||++.|+++
T Consensus 298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 298 APENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 34456678899999999999999999999976
No 175
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=4.2e-26 Score=259.36 Aligned_cols=271 Identities=13% Similarity=0.229 Sum_probs=202.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCc------ccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEE
Q 002736 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE------NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 570 ~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~------~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~ 643 (886)
.|.....++|+..+++++.+.....|+....... ......+....+|.+.|.+++|+|.++++|++|+.||+|+
T Consensus 22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk 101 (493)
T PTZ00421 22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM 101 (493)
T ss_pred ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 3444455566566666666666666664331100 0001112234579999999999997788999999999999
Q ss_pred EEECCCc-------eEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEE
Q 002736 644 VWDVSRS-------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCV 715 (886)
Q Consensus 644 iWd~~t~-------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v 715 (886)
|||+.++ ..+..+.+|...|.+++|+|...++|++|+.|++|+|||+++ +..+..+. +...|.++
T Consensus 102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t-------g~~~~~l~~h~~~V~sl 174 (493)
T PTZ00421 102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER-------GKAVEVIKCHSDQITSL 174 (493)
T ss_pred EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC-------CeEEEEEcCCCCceEEE
Confidence 9999765 356778899999999999995567999999999999999998 55555665 45679999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCe-EEEEec-CCCEEEEEE----CCCcEEEEeCCCCCcccc
Q 002736 716 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTV-SYVKFV-DATTLVSAS----TDNTLKLWDLSMCTSRVI 789 (886)
Q Consensus 716 ~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V-~~v~f~-~~~~l~sgs----~Dg~i~lwd~~~~~~~~~ 789 (886)
+|+|+ +.+|++|+.|++|++||+++++ ++..+.+|...+ ..+.|. ++..|++++ .|++|++||++...
T Consensus 175 a~spd-G~lLatgs~Dg~IrIwD~rsg~-~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~---- 248 (493)
T PTZ00421 175 EWNLD-GSLLCTTSKDKKLNIIDPRDGT-IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA---- 248 (493)
T ss_pred EEECC-CCEEEEecCCCEEEEEECCCCc-EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC----
Confidence 99999 8999999999999999999987 478888997654 456675 666777654 47999999998764
Q ss_pred CCCceEeecCC-CceeEEEEecCCCEEEEEc-CCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccC
Q 002736 790 DTPLHSFTGHT-NVKNFVGLSVWDGYVATGS-ETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQ 866 (886)
Q Consensus 790 ~~~~~~~~~h~-~~v~~v~~sp~g~~lasgs-~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~ 866 (886)
.++.....+. ..+....|++++.+|++|+ .|+.|++||+..++++....+.+.. ++.++||.|.
T Consensus 249 -~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~------------~~~g~~~~pk 314 (493)
T PTZ00421 249 -SPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVE------------PHKGLCMMPK 314 (493)
T ss_pred -CceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCC------------CCcceEeccc
Confidence 3455444333 4566678999999988887 5999999999998877766554333 3556666664
No 176
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=6.4e-29 Score=280.61 Aligned_cols=209 Identities=15% Similarity=0.169 Sum_probs=157.1
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
+...+...+|++++..+. ++. ....++++||+.+++|.+++.. ...+++.+++.|+.||+.||.|||++||||||
T Consensus 136 E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrD 210 (392)
T PHA03207 136 EIDILKTISHRAIINLIH-AYR---WKSTVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRD 210 (392)
T ss_pred HHHHHHhcCCCCccceee-eEe---eCCEEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 344566678999988776 333 3467899999988999999943 36789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++..+.++|+|||++.........
T Consensus 211 lkp~Nill~~~~~~~l~DfG~a~~~~~~~~~------------------------------------------------- 241 (392)
T PHA03207 211 VKTENIFLDEPENAVLGDFGAACKLDAHPDT------------------------------------------------- 241 (392)
T ss_pred CCHHHEEEcCCCCEEEccCccccccCccccc-------------------------------------------------
Confidence 9999999999999999999998543211000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
.......||+.|+|||++.+..|+.++|||||||+||||++
T Consensus 242 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~ 282 (392)
T PHA03207 242 ---------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV 282 (392)
T ss_pred ---------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 00112378999999999998889999999999999999998
Q ss_pred ---CCCCCchhh--HHhHhh--------------------------ccCCCC----hh-h--hccChhhHHHHHHccCCC
Q 002736 268 ---PFSTGEEKT--RTMSSL--------------------------RHRVLP----PQ-L--LLKFPKEASFCLWLLHPE 309 (886)
Q Consensus 268 ---pf~~~~~~~--~~~~~~--------------------------~~~~~~----~~-~--~~~~~~~~~li~~~L~~d 309 (886)
||+...... ..+..+ .....+ +. + .....++.+||.+||..|
T Consensus 283 g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d 362 (392)
T PHA03207 283 KNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFD 362 (392)
T ss_pred CCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccC
Confidence 775543211 000000 000000 00 0 112345678999999999
Q ss_pred CCCCCCHHHHhcCCCCCCCc
Q 002736 310 PSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 310 P~~Rps~~eil~h~~~~~~~ 329 (886)
|.+||++.|+|.||||...+
T Consensus 363 p~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 363 QEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred hhhCCCHHHHhhCchhhccc
Confidence 99999999999999998643
No 177
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95 E-value=6.2e-29 Score=277.43 Aligned_cols=205 Identities=20% Similarity=0.230 Sum_probs=153.2
Q ss_pred ceeecccccccCCCCCCccccccc---cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
...+...+|++++..++ ++.... ....++++|||.+++|.+++.. .+++..+..++.||+.||.|||++||+|
T Consensus 67 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH 142 (355)
T cd07874 67 LVLMKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIH 142 (355)
T ss_pred HHHHHHhCCCchhceee-eeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 34455678999988776 443322 2345799999988899888843 4789999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+|||++.++.+||+|||+++..+...
T Consensus 143 rDikp~Nill~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 173 (355)
T cd07874 143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------- 173 (355)
T ss_pred CCCChHHEEECCCCCEEEeeCcccccCCCcc-------------------------------------------------
Confidence 9999999999999999999999985432110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......||+.|+|||.+.+..++.++|||||||++|||
T Consensus 174 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el 211 (355)
T cd07874 174 ------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211 (355)
T ss_pred ------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence 00112679999999999998899999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhcc----------------------C------CCChh------------hhccChhhHHHH
Q 002736 266 FC---PFSTGEEKTRTMSSLRH----------------------R------VLPPQ------------LLLKFPKEASFC 302 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~----------------------~------~~~~~------------~~~~~~~~~~li 302 (886)
++ ||............+.. . ..+.. .......+.+||
T Consensus 212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 291 (355)
T cd07874 212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 291 (355)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHH
Confidence 99 67544322111110000 0 00000 001124567999
Q ss_pred HHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 303 LWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 303 ~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.+||..||.+|||+.|+|+||||...
T Consensus 292 ~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 292 SKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHhcCCchhcCCHHHHhcCcchhcc
Confidence 99999999999999999999999754
No 178
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.95 E-value=1.3e-28 Score=270.80 Aligned_cols=200 Identities=18% Similarity=0.233 Sum_probs=156.1
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++.++. .+. ..+.++++||| .|++|..++.+. ..+++.++..++.||+.||.|||++||+||||||
T Consensus 50 l~~~~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp 124 (321)
T cd05603 50 LKNLKHPFLVGLHY-SFQ---TAEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKP 124 (321)
T ss_pred HHhCCCCCccceee-EEE---cCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence 45568888888765 333 34678999999 788999988543 5689999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||||+.++.+||+|||+++.......
T Consensus 125 ~NIll~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------- 151 (321)
T cd05603 125 ENILLDSQGHVVLTDFGLCKEGVEPEE----------------------------------------------------- 151 (321)
T ss_pred HHeEECCCCCEEEccCCCCccCCCCCC-----------------------------------------------------
Confidence 999999999999999999853211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
.....+||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 152 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (321)
T cd05603 152 -------------------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLP 194 (321)
T ss_pred -------------------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCC
Confidence 0112378999999999998889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH----HHHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~----~eil~h~~~~~~ 328 (886)
||...... .....+..... ..+......+.+++.+||+.+|.+||++ .++++|+||...
T Consensus 195 pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 195 PFYSRDVS-QMYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCHH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 77655433 23333332221 2223455678899999999999999875 599999999764
No 179
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=1e-28 Score=272.68 Aligned_cols=202 Identities=18% Similarity=0.187 Sum_probs=155.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhccc-Ceeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-giiHrD 107 (886)
..+...+|++++.+++ ++.+ .+.++++||| .|++|.+++.+. ..+++..+..++.||+.||.|||++ +|+|||
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~d 129 (331)
T cd06649 55 QVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRD 129 (331)
T ss_pred HHHHHCCCCCCCeEEE-EEEE---CCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCC
Confidence 3455678999988877 4433 4568899999 788999999654 4689999999999999999999986 699999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+||+|||++......
T Consensus 130 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------------- 157 (331)
T cd06649 130 VKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------------- 157 (331)
T ss_pred CChhhEEEcCCCcEEEccCccccccccc----------------------------------------------------
Confidence 9999999999999999999998533110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 158 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 197 (331)
T cd06649 158 ----------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAI 197 (331)
T ss_pred ----------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHh
Confidence 0011267899999999998889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhc----------------------------------------------cCCCChh-hhccChh
Q 002736 268 ---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQ-LLLKFPK 297 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~----------------------------------------------~~~~~~~-~~~~~~~ 297 (886)
||....... ....+. ....+.. .....++
T Consensus 198 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (331)
T cd06649 198 GRYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPD 276 (331)
T ss_pred CCCCCCCCCHHH-HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHH
Confidence 774432211 111110 0001111 1123567
Q ss_pred hHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 298 ~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
+.+|+.+||.+||++|||+.|+++||||....
T Consensus 277 l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 277 FQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred HHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 88999999999999999999999999998643
No 180
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.95 E-value=6.9e-29 Score=279.28 Aligned_cols=245 Identities=13% Similarity=0.176 Sum_probs=161.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.++. .+. ..+.+|++||| .|++|.++|.+. +.+++..++.++.||+.||+|||++||+|||||
T Consensus 54 il~~l~h~~iv~~~~-~~~---~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlk 128 (376)
T cd05598 54 ILAEADNEWVVKLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIK 128 (376)
T ss_pred HHHhCCCCCcceEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 445568888888776 333 35689999999 789999999654 568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+||+|||++..+........+... .....+...+..... ....+.
T Consensus 129 p~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~---~~~~~~-- 184 (376)
T cd05598 129 PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKG-------------------DHHRQDSMEPSEEWS---EIDRCR-- 184 (376)
T ss_pred HHHEEECCCCCEEEEeCCCCccccccccccccccc-------------------ccccccccccccccc---cccccc--
Confidence 99999999999999999998654321100000000 000000000000000 000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
. ...................+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 185 ------------------~-----~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~ 241 (376)
T cd05598 185 ------------------L-----KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241 (376)
T ss_pred ------------------c-----cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence 0 000000000000001123589999999999999889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhcc--CCCChhhhccChhhHHHHHHccCCCCCCCC---CHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---s~~eil~h~~~~~~ 328 (886)
||............... ....+.....++.+.++|.+|+ .+|.+|+ ++.++++||||...
T Consensus 242 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 242 PPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred CCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 77655543332222221 1112223345678889999976 5999999 99999999999864
No 181
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95 E-value=1.2e-28 Score=265.55 Aligned_cols=204 Identities=17% Similarity=0.177 Sum_probs=154.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
.+...+|++++...+ ++. ..+.++++||| .|++|.+++.. ....+++..++.++.||+.||.|||++||+||
T Consensus 46 il~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 121 (280)
T cd05608 46 ILAKVHSRFIVSLAY-AFQ---TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYR 121 (280)
T ss_pred HHHhCCCCcEeeeeE-EEc---CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 344557777777555 333 23568899998 78999887732 34568999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++.++.+|++|||++........
T Consensus 122 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------- 152 (280)
T cd05608 122 DLKPENVLLDNDGNVRISDLGLAVELKDGQS------------------------------------------------- 152 (280)
T ss_pred CCCHHHEEECCCCCEEEeeCccceecCCCCc-------------------------------------------------
Confidence 9999999999999999999999854321100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 153 -----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 191 (280)
T cd05608 153 -----------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMI 191 (280)
T ss_pred -----------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHH
Confidence 001126789999999999999999999999999999999
Q ss_pred c---CCCCCchhhH---HhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 267 C---PFSTGEEKTR---TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 267 ~---pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
+ ||........ ....+... ........++.+.+++.+||+.||.+|| +++++++||||+...
T Consensus 192 ~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 192 AARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred hCCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 9 7754332211 11111111 1112234567788999999999999999 889999999998743
No 182
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.95 E-value=1e-28 Score=270.14 Aligned_cols=206 Identities=14% Similarity=0.201 Sum_probs=155.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++..++ ++. ..+.++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|||||
T Consensus 56 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlk 131 (309)
T cd07872 56 SLLKDLKHANIVTLHD-IVH---TDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLK 131 (309)
T ss_pred HHHHhCCCCCcceEEE-EEe---eCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 3445567888888777 443 346789999998889999997665668999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+|++|||++........
T Consensus 132 p~Nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------- 159 (309)
T cd07872 132 PQNLLINERGELKLADFGLARAKSVPTK---------------------------------------------------- 159 (309)
T ss_pred HHHEEECCCCCEEECccccceecCCCcc----------------------------------------------------
Confidence 9999999999999999999853211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++++|+|||.+.+ ..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg 201 (309)
T cd07872 160 --------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASG 201 (309)
T ss_pred --------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 0001256889999999876 458999999999999999999
Q ss_pred --CCCCCchhhHHhHhhc--cCC------------------CC--------hhhhccChhhHHHHHHccCCCCCCCCCHH
Q 002736 268 --PFSTGEEKTRTMSSLR--HRV------------------LP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~--~~~------------------~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
||.............. ... .+ ......++++.+|+.+||..||.+|||+.
T Consensus 202 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 281 (309)
T cd07872 202 RPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAE 281 (309)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHH
Confidence 6644432221111110 000 00 01122456778999999999999999999
Q ss_pred HHhcCCCCCCCc
Q 002736 318 ELLQSEFLNEPR 329 (886)
Q Consensus 318 eil~h~~~~~~~ 329 (886)
|+++||||....
T Consensus 282 e~l~h~~~~~~~ 293 (309)
T cd07872 282 EAMKHAYFRSLG 293 (309)
T ss_pred HHhcChhhhhcc
Confidence 999999998753
No 183
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=8e-28 Score=243.34 Aligned_cols=281 Identities=17% Similarity=0.267 Sum_probs=231.1
Q ss_pred CcccCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCC
Q 002736 562 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (886)
Q Consensus 562 ~~~~~h~~~V~sl~f~~d~-~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg 640 (886)
+.+.+|...|.|++=+|.. ..+|+|+.||.|+|||+... .......+|.+.|..|++.. +.+++++.|.
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR-------~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDK 129 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQR-------ECIRTFKAHEGLVRGICVTQ---TSFFTVGDDK 129 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhh-------hhhheeecccCceeeEEecc---cceEEecCCc
Confidence 5567899999999999976 78999999999999999863 22334457889999999975 6788888999
Q ss_pred cEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecC-CCeEEEEEeC
Q 002736 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTK-ANVCCVQFPL 719 (886)
Q Consensus 641 ~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~-~~v~~v~~sp 719 (886)
+|+.|.+.. .+..++-+ ...+..|+-+. ..+.++||+. .|.|||... ..++..+... ..|.|+.|+|
T Consensus 130 tvK~wk~~~-~p~~tilg-~s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R-------~~Pv~smswG~Dti~svkfNp 197 (433)
T KOG0268|consen 130 TVKQWKIDG-PPLHTILG-KSVYLGIDHHR-KNSVFATCGE--QIDIWDEQR-------DNPVSSMSWGADSISSVKFNP 197 (433)
T ss_pred ceeeeeccC-Ccceeeec-ccccccccccc-ccccccccCc--eeeeccccc-------CCccceeecCCCceeEEecCC
Confidence 999999865 35555543 45677888775 6789999985 599999987 6777777765 4599999999
Q ss_pred CCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeec
Q 002736 720 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG 798 (886)
Q Consensus 720 ~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~ 798 (886)
....+|++|..|+.|.+||+|... |+....- ...-+.|+|. ..-.+++|+.|..+..||.+... .|+..+.+
T Consensus 198 vETsILas~~sDrsIvLyD~R~~~-Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~-----~p~~v~~d 270 (433)
T KOG0268|consen 198 VETSILASCASDRSIVLYDLRQAS-PLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS-----RPLNVHKD 270 (433)
T ss_pred CcchheeeeccCCceEEEecccCC-ccceeee-eccccceecCccccceeeccccccceehhhhhhc-----ccchhhcc
Confidence 988899999999999999999987 4544321 2345789996 66788999999999999999875 78999999
Q ss_pred CCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCC
Q 002736 799 HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSG 878 (886)
Q Consensus 799 h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg 878 (886)
|.+.|.+|+|||.|+-+++||.|.+|+||.+..+..--.+.. .--+.|.||.||-|+. ++++|++|+
T Consensus 271 hvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYht------------kRMq~V~~Vk~S~Dsk-yi~SGSdd~ 337 (433)
T KOG0268|consen 271 HVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHT------------KRMQHVFCVKYSMDSK-YIISGSDDG 337 (433)
T ss_pred cceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhH------------hhhheeeEEEEecccc-EEEecCCCc
Confidence 999999999999999999999999999999876543322221 1134599999999999 999999999
Q ss_pred CEEEEE
Q 002736 879 NIKILE 884 (886)
Q Consensus 879 ~I~iw~ 884 (886)
+|++|.
T Consensus 338 nvRlWk 343 (433)
T KOG0268|consen 338 NVRLWK 343 (433)
T ss_pred ceeeee
Confidence 999996
No 184
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.5e-29 Score=249.39 Aligned_cols=207 Identities=15% Similarity=0.189 Sum_probs=158.0
Q ss_pred ccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcc
Q 002736 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (886)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~N 112 (886)
+..|+|++.+.. +.+ +...||++||- .||+|...|.++ ..+++.++..+.++|+.||+|||.+||+||||||+|
T Consensus 132 Cqgh~nilqLie-fFE---dd~~FYLVfEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPEN 206 (463)
T KOG0607|consen 132 CQGHKNILQLIE-FFE---DDTRFYLVFEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPEN 206 (463)
T ss_pred hcCCccHHHHHH-Hhc---ccceEEEEEecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccc
Confidence 478999877666 333 45789999998 999999999665 678999999999999999999999999999999999
Q ss_pred eeeccCCc---eeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 113 FVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 113 Ill~~~~~---vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
||-...++ |||+||.+.+...... +..++..
T Consensus 207 iLC~~pn~vsPvKiCDfDLgSg~k~~~---------------------------------~~spast------------- 240 (463)
T KOG0607|consen 207 ILCESPNKVSPVKICDFDLGSGIKLNN---------------------------------DCSPAST------------- 240 (463)
T ss_pred eeecCCCCcCceeeeccccccccccCC---------------------------------CCCCCCC-------------
Confidence 99987665 8999998875432110 0000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---C--CCCCcccccchHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---G--APVSCASDIYRLGVLLFE 264 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~--~~~s~~sDIwSlGvil~e 264 (886)
....+.+|+..|||||++. + ..|+.++|.||||||||-
T Consensus 241 -------------------------------------P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYI 283 (463)
T KOG0607|consen 241 -------------------------------------PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYI 283 (463)
T ss_pred -------------------------------------ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHH
Confidence 0223458999999999874 2 348999999999999999
Q ss_pred Hhc---CCCCCc----------h----hhHHhHhhccC---CCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCC
Q 002736 265 LFC---PFSTGE----------E----KTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (886)
Q Consensus 265 Ll~---pf~~~~----------~----~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 324 (886)
||+ ||.+.- . .......+.++ +....|...+.++++++..+|..||.+|.++.++++|||
T Consensus 284 mLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 284 MLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred HHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 999 664321 1 11122333333 334567778888999999999999999999999999999
Q ss_pred CCCC
Q 002736 325 LNEP 328 (886)
Q Consensus 325 ~~~~ 328 (886)
++..
T Consensus 364 ~~~~ 367 (463)
T KOG0607|consen 364 VQRC 367 (463)
T ss_pred cccc
Confidence 9864
No 185
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-30 Score=299.36 Aligned_cols=211 Identities=19% Similarity=0.211 Sum_probs=179.7
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
.++-++...+|+|.+.+|| -|+.-+..+|.||| .||+|.+.+ +.++..++...+.|..|++.||.|||++||||
T Consensus 1283 eEm~vlE~lnHpNlV~YyG----VEvHRekv~IFMEyC~~GsLa~ll-~~gri~dE~vt~vyt~qll~gla~LH~~gIVH 1357 (1509)
T KOG4645|consen 1283 EEMKVLEGLNHPNLVRYYG----VEVHREKVYIFMEYCEGGSLASLL-EHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVH 1357 (1509)
T ss_pred HHHHHHHhccCccccccCc----eeecHHHHHHHHHHhccCcHHHHH-HhcchhhhhHHHHHHHHHHHHHHHHHhcCcee
Confidence 4555667789999999998 56667778899999 899999988 44577899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+||+|+.+|.+||.|||.|..+...
T Consensus 1358 RDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~-------------------------------------------------- 1387 (1509)
T KOG4645|consen 1358 RDIKPANILLDFNGLIKYGDFGSAVKIKNN-------------------------------------------------- 1387 (1509)
T ss_pred cCCCccceeeecCCcEEeecccceeEecCc--------------------------------------------------
Confidence 999999999999999999999999544211
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC---CCcccccchHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDIwSlGvil 262 (886)
.+.+|......+||+.|||||++.+.. -.-+.|||||||+.
T Consensus 1388 ------------------------------------~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV 1431 (1509)
T KOG4645|consen 1388 ------------------------------------AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV 1431 (1509)
T ss_pred ------------------------------------hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE
Confidence 011122233459999999999998754 46699999999999
Q ss_pred HHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.||+| |+.......+.|..+..+-.|+.+...+++..+||..||..||+.|.++.|++.|-|-+..
T Consensus 1432 lEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1432 LEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred EEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 99999 8888888888999888888888888888999999999999999999999999999887653
No 186
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.95 E-value=5.5e-28 Score=240.17 Aligned_cols=272 Identities=17% Similarity=0.248 Sum_probs=232.2
Q ss_pred cccccccceEEeeecCceEEEEecc---CcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEE
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~---~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~ 613 (886)
++|+.||.+.+|+|.+++....|+. ..+.-|..+|.|+.|++|.+.+|+|+.||+||||.+.++..-. ...
T Consensus 229 vsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClR------rFd 302 (508)
T KOG0275|consen 229 VSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLR------RFD 302 (508)
T ss_pred eeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHH------Hhh
Confidence 6788999999999999999988873 5577899999999999999999999999999999998753322 223
Q ss_pred ecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchh
Q 002736 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (886)
Q Consensus 614 ~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~ 693 (886)
.+|...|+|+.|+. ++..++|+++|-+|+|.-+.+|+++.+|++|..-|+...|.+ +|+.+++++.||+|++|+..+.
T Consensus 303 rAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvkvW~~Ktt 380 (508)
T KOG0275|consen 303 RAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTVKVWHGKTT 380 (508)
T ss_pred hhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccEEEecCcch
Confidence 46899999999998 788999999999999999999999999999999999999997 9999999999999999999995
Q ss_pred hhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecC----CCCeEEEEecCCCEEEE
Q 002736 694 ILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH----NKTVSYVKFVDATTLVS 769 (886)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h----~~~V~~v~f~~~~~l~s 769 (886)
....++.. ......|++|-.-|.+...++++...++|++.++.. + .+.+|..- ..-|.++--+.|+++..
T Consensus 381 eC~~Tfk~----~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-Q-vVrsfsSGkREgGdFi~~~lSpkGewiYc 454 (508)
T KOG0275|consen 381 ECLSTFKP----LGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-Q-VVRSFSSGKREGGDFINAILSPKGEWIYC 454 (508)
T ss_pred hhhhhccC----CCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-e-EEeeeccCCccCCceEEEEecCCCcEEEE
Confidence 44333221 123567999999998899999999999999999863 3 36665432 23355555459999999
Q ss_pred EECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEe
Q 002736 770 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 828 (886)
Q Consensus 770 gs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd 828 (886)
.+.|+.+..|.+.++ ...+++.-|..-+..++-+|..+.||+-++||.+++|.
T Consensus 455 igED~vlYCF~~~sG------~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 455 IGEDGVLYCFSVLSG------KLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EccCcEEEEEEeecC------ceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 999999999999988 45788889999999999999999999999999999994
No 187
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95 E-value=1.1e-28 Score=277.08 Aligned_cols=209 Identities=18% Similarity=0.217 Sum_probs=155.6
Q ss_pred ceeecccccccCCCCCCccccccc--cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
...+...+|+|++..++ ++..+. ....+|++|||.+++|.+++... ..+++.+++.++.||+.||.|||++||+||
T Consensus 50 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~ 127 (372)
T cd07853 50 LKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHR 127 (372)
T ss_pred HHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 34455668899888777 554332 12268999999888999988554 578999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+|||++.++.+||+|||++........
T Consensus 128 dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~------------------------------------------------- 158 (372)
T cd07853 128 DIKPGNLLVNSNCVLKICDFGLARVEEPDES------------------------------------------------- 158 (372)
T ss_pred CCChHHEEECCCCCEEeccccceeecccCcc-------------------------------------------------
Confidence 9999999999999999999999853311100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eL 265 (886)
......+++++|+|||.+.+.. ++.++|||||||++|||
T Consensus 159 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 198 (372)
T cd07853 159 ----------------------------------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAEL 198 (372)
T ss_pred ----------------------------------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHH
Confidence 0001126789999999998754 89999999999999999
Q ss_pred hc---CCCCCchhhHHhHh----------------------h-ccCCCChh-------hhccChhhHHHHHHccCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSS----------------------L-RHRVLPPQ-------LLLKFPKEASFCLWLLHPEPSG 312 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~----------------------~-~~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~ 312 (886)
++ ||............ + .....++. .....+++.+||.+||+.||.+
T Consensus 199 ~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 278 (372)
T cd07853 199 LGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDK 278 (372)
T ss_pred HcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhh
Confidence 99 66444322111100 0 00111111 1123566789999999999999
Q ss_pred CCCHHHHhcCCCCCCC
Q 002736 313 RPKMGELLQSEFLNEP 328 (886)
Q Consensus 313 Rps~~eil~h~~~~~~ 328 (886)
|||+.|+|+||||...
T Consensus 279 R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 279 RISAADALAHPYLDEG 294 (372)
T ss_pred CcCHHHHhcCHhhCCC
Confidence 9999999999999875
No 188
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95 E-value=9.6e-29 Score=276.30 Aligned_cols=236 Identities=14% Similarity=0.179 Sum_probs=158.8
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++..++ .+. ..+.++++||| .|++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||
T Consensus 55 l~~l~~~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp 129 (360)
T cd05627 55 LVEADGAWVVKMFY-SFQ---DKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKP 129 (360)
T ss_pred HHhCCCCCEeeEEE-EEE---cCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCH
Confidence 44567888888776 332 34678999999 789999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++++||+|||++............ ..... ....++.....
T Consensus 130 ~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~------~~~~~-------------~~~~~~~~~~~-------------- 176 (360)
T cd05627 130 DNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY------RNLTH-------------NPPSDFSFQNM-------------- 176 (360)
T ss_pred HHEEECCCCCEEEeeccCCcccccccccccc------ccccc-------------CCccccccccc--------------
Confidence 9999999999999999998754322100000 00000 00000000000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
.... ................+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 177 ---------------------~~~~-~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 177 ---------------------NSKR-KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred ---------------------cccc-ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 0000 000000000011123589999999999999889999999999999999999
Q ss_pred CCCCCchhhHHhHhhc--cCCCChhhhccChhhHHHHHHccCCCCCCCC---CHHHHhcCCCCCCC
Q 002736 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---s~~eil~h~~~~~~ 328 (886)
||............+. .....+.....++.+.+||.+|+. +|.+|+ ++.++++||||...
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 235 PFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 7765544333322222 111112222356788899999874 999997 48999999999975
No 189
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-29 Score=251.55 Aligned_cols=213 Identities=18% Similarity=0.221 Sum_probs=165.8
Q ss_pred CcccccccCceeecccccccCCCCCCccc--cccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHh
Q 002736 20 DFELRKHSDGVELTHGDHLRNQGGLSGVC--ENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 97 (886)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~ 97 (886)
.+..|..++...+.+.+|+|+++++.-+. ....+...+|++||+...+|.+.+. ..++-..+..|+.|++.|+.|
T Consensus 57 ~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~ 133 (369)
T KOG0665|consen 57 THAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKH 133 (369)
T ss_pred ccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHH
Confidence 44568889999999999999999888322 2333456689999999999999885 346888999999999999999
Q ss_pred hcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 98 lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
||+.||+||||||+||++..+..+|+.|||+++..+.+
T Consensus 134 lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~------------------------------------------ 171 (369)
T KOG0665|consen 134 LHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD------------------------------------------ 171 (369)
T ss_pred HHhcceeecccCcccceecchhheeeccchhhcccCcc------------------------------------------
Confidence 99999999999999999999999999999999533211
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
+..+.++.|.+|+|||++.+..|...+||||
T Consensus 172 -------------------------------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwS 202 (369)
T KOG0665|consen 172 -------------------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWS 202 (369)
T ss_pred -------------------------------------------------cccCchhheeeccCchheeccCCcccchhhh
Confidence 1345568999999999999988999999999
Q ss_pred HHHHHHHHhc--CCCCCchhhHHh---------------Hhhcc------------------CCCC-----hhhh---cc
Q 002736 258 LGVLLFELFC--PFSTGEEKTRTM---------------SSLRH------------------RVLP-----PQLL---LK 294 (886)
Q Consensus 258 lGvil~eLl~--pf~~~~~~~~~~---------------~~~~~------------------~~~~-----~~~~---~~ 294 (886)
+|||+.||+. -++.+..+...+ ..+.. ..+| .... ..
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 9999999998 223343332222 11100 0011 1111 11
Q ss_pred ChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
...+.+++.+||..+|++|.+++++|+|||++
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 22356999999999999999999999999997
No 190
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=4.3e-27 Score=241.29 Aligned_cols=269 Identities=16% Similarity=0.239 Sum_probs=219.9
Q ss_pred ccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEec
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~ 615 (886)
.+++..|.+.-+|....-.. -+|+ ..+.+|..+|.-+.|+||.+++++||.+..+++||..++...+. +..+
T Consensus 239 LAsaSkD~Taiiw~v~~d~~-~kl~-~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~------y~~~ 310 (519)
T KOG0293|consen 239 LASASKDSTAIIWIVVYDVH-FKLK-KTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHL------YPSG 310 (519)
T ss_pred EeeccCCceEEEEEEecCcc-eeee-eeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhh------cccC
Confidence 46677888999997654222 1221 23478999999999999999999999999999999987533221 1223
Q ss_pred CCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEeccc-CCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhh
Q 002736 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (886)
Q Consensus 616 ~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~ 694 (886)
+...+++++|+| ++..+++|+.|+++..||+... .....++- ...|++++..+ |+.++++.+.|..|++++..+
T Consensus 311 ~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDgn-~~~~W~gvr~~~v~dlait~-Dgk~vl~v~~d~~i~l~~~e~-- 385 (519)
T KOG0293|consen 311 LGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDGN-ILGNWEGVRDPKVHDLAITY-DGKYVLLVTVDKKIRLYNREA-- 385 (519)
T ss_pred cCCCcceeEEcc-CCceeEecCCCCcEEEecCCcc-hhhcccccccceeEEEEEcC-CCcEEEEEecccceeeechhh--
Confidence 457899999999 7899999999999999998643 34444432 25699999998 999999999999999999988
Q ss_pred hhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeE--EEEec--CCCEEEEE
Q 002736 695 LLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVS--YVKFV--DATTLVSA 770 (886)
Q Consensus 695 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~--~v~f~--~~~~l~sg 770 (886)
......+.....|++.+.+.+ ++++++.-.+..|++||+...+. +..+.||+..-. .-+|- +...++||
T Consensus 386 -----~~dr~lise~~~its~~iS~d-~k~~LvnL~~qei~LWDl~e~~l-v~kY~Ghkq~~fiIrSCFgg~~~~fiaSG 458 (519)
T KOG0293|consen 386 -----RVDRGLISEEQPITSFSISKD-GKLALVNLQDQEIHLWDLEENKL-VRKYFGHKQGHFIIRSCFGGGNDKFIASG 458 (519)
T ss_pred -----hhhhccccccCceeEEEEcCC-CcEEEEEcccCeeEEeecchhhH-HHHhhcccccceEEEeccCCCCcceEEec
Confidence 455556667788999999999 89999999999999999997764 777888886533 33453 77899999
Q ss_pred ECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCC-EEEEEcCCCcEEEEecC
Q 002736 771 STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKA 830 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~lasgs~Dg~v~iwd~~ 830 (886)
|.|+.|+||+..++ .++.++.||...|++|+|+|... .+|++|.||+|+||-..
T Consensus 459 SED~kvyIWhr~sg------kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 459 SEDSKVYIWHRISG------KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred CCCceEEEEEccCC------ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 99999999999988 67999999999999999999876 89999999999999754
No 191
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-29 Score=268.64 Aligned_cols=204 Identities=17% Similarity=0.130 Sum_probs=163.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.|-...|||.|.+-+ ++. .....++|||||-||-.++|.-...++.+.++..|+.+.+.||.||||.+.||||||.
T Consensus 79 FL~~l~HPntieYkg-CyL---re~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKA 154 (948)
T KOG0577|consen 79 FLRQLRHPNTIEYKG-CYL---REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKA 154 (948)
T ss_pred HHHhccCCCcccccc-eee---ccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccc
Confidence 455678999988666 332 3355678999998888888865556799999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
.||||+..|.||++|||.+......
T Consensus 155 GNILLse~g~VKLaDFGSAsi~~PA------------------------------------------------------- 179 (948)
T KOG0577|consen 155 GNILLSEPGLVKLADFGSASIMAPA------------------------------------------------------- 179 (948)
T ss_pred cceEecCCCeeeeccccchhhcCch-------------------------------------------------------
Confidence 9999999999999999998543211
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC---CCCCcccccchHHHHHHHHhc
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDIwSlGvil~eLl~ 267 (886)
..++|||+|||||+|.. +.|+-++||||||+++.||.-
T Consensus 180 ---------------------------------------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE 220 (948)
T KOG0577|consen 180 ---------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 220 (948)
T ss_pred ---------------------------------------hcccCCccccchhHheeccccccCCccceeeccchhhhhhh
Confidence 12499999999999864 569999999999999999998
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhh-hccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCchH
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~~ 333 (886)
|+|..+...+.+.+-... .|... ...+..+..|+..||.+-|.+|||.+++|.|+|+...+.+..
T Consensus 221 RkPPlFnMNAMSALYHIAQNe-sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tv 289 (948)
T KOG0577|consen 221 RKPPLFNMNAMSALYHIAQNE-SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTV 289 (948)
T ss_pred cCCCccCchHHHHHHHHHhcC-CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchH
Confidence 777666655554443332 22222 223456779999999999999999999999999987766544
No 192
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=2.6e-28 Score=269.59 Aligned_cols=204 Identities=17% Similarity=0.220 Sum_probs=155.4
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+....|++++..+. ++. ..+.++++||| .|++|.++|.+....+++..++.++.||+.||+|||++||+||||||
T Consensus 55 l~~~~~~~i~~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp 130 (332)
T cd05623 55 LVNGDNQWITTLHY-AFQ---DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKP 130 (332)
T ss_pred HhhCCCCCEeeEEE-EEe---cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence 34457777776655 333 34678999998 78999999976556789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||++........
T Consensus 131 ~Nili~~~~~~kL~DfG~a~~~~~~~~----------------------------------------------------- 157 (332)
T cd05623 131 DNILMDMNGHIRLADFGSCLKLMEDGT----------------------------------------------------- 157 (332)
T ss_pred HHEEECCCCCEEEeecchheecccCCc-----------------------------------------------------
Confidence 999999999999999999853311100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHHHHHH
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvil~eL 265 (886)
......+||+.|+|||++. ...++.++|||||||+||||
T Consensus 158 ------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~el 201 (332)
T cd05623 158 ------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEM 201 (332)
T ss_pred ------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHH
Confidence 0011237899999999986 24589999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccC---CCChhhhccChhhHHHHHHccCCCCCC--CCCHHHHhcCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rps~~eil~h~~~~~~ 328 (886)
++ ||................ .+|......++.+.+|+.+||..+|.. |+++.|+++||||...
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 202 LYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred hcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 99 776554433333332221 233344456788899999999765544 6899999999999864
No 193
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-25 Score=257.96 Aligned_cols=321 Identities=17% Similarity=0.230 Sum_probs=215.4
Q ss_pred eeecCceEEEEeccCcccCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEe
Q 002736 548 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (886)
Q Consensus 548 w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~-~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~ 626 (886)
|+.. |..++.| ..|+..|..++.++.. .+|+|||.||+||||++....................+.+.++...
T Consensus 1034 W~p~-G~lVAhL-----~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1034 WNPR-GILVAHL-----HEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC 1107 (1431)
T ss_pred CCcc-ceEeehh-----hhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec
Confidence 6643 4555555 5688888888888755 9999999999999999987544432223333333477888999888
Q ss_pred CCCCCeEEEecCCCcEEEEECCCce-------EEEEeccc-CCcEEEE-EEccCCCC-EEEEEeCCCcEEEEeCchhhhh
Q 002736 627 SYIKSQIASSNFEGVVQVWDVSRSQ-------VLTEMREH-ERRVWSI-DFSSADPT-LLASGSDDGSVKLWSINQAILL 696 (886)
Q Consensus 627 ~~~~~~las~s~Dg~V~iWd~~t~~-------~~~~~~~h-~~~v~~v-~~~p~~~~-~l~sgs~Dg~v~lwd~~~~~~~ 696 (886)
+ .++.+|.|+.||.|++.++.... +.+..+.+ .+.+.++ .|.-.... .|+.+..-+.|..||+++.
T Consensus 1108 ~-~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~--- 1183 (1431)
T KOG1240|consen 1108 G-NGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMR--- 1183 (1431)
T ss_pred c-CCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhh---
Confidence 7 68899999999999999987621 12222222 2333333 33322344 7888899999999999983
Q ss_pred hccCceeeeee---cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEE-ecCCCCeEEEEec--C--CCEEE
Q 002736 697 LHLGVSIGTIK---TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTL-IGHNKTVSYVKFV--D--ATTLV 768 (886)
Q Consensus 697 ~~~~~~~~~~~---~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~-~~h~~~V~~v~f~--~--~~~l~ 768 (886)
...+.++ .++.|++++.+|. ++++++|+..|.+.+||+|-.. ++..+ .++..++..|..+ . ....+
T Consensus 1184 ----~~~w~lk~~~~hG~vTSi~idp~-~~WlviGts~G~l~lWDLRF~~-~i~sw~~P~~~~i~~v~~~~~~~~~S~~v 1257 (1431)
T KOG1240|consen 1184 ----HDAWRLKNQLRHGLVTSIVIDPW-CNWLVIGTSRGQLVLWDLRFRV-PILSWEHPARAPIRHVWLCPTYPQESVSV 1257 (1431)
T ss_pred ----hhHHhhhcCccccceeEEEecCC-ceEEEEecCCceEEEEEeecCc-eeecccCcccCCcceEEeeccCCCCceEE
Confidence 3333333 3577999999999 8999999999999999999766 45544 3566777777663 2 24555
Q ss_pred EEE--CCCcEEEEeCCCCCcccc-----CCCceEee--------cCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCC
Q 002736 769 SAS--TDNTLKLWDLSMCTSRVI-----DTPLHSFT--------GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 833 (886)
Q Consensus 769 sgs--~Dg~i~lwd~~~~~~~~~-----~~~~~~~~--------~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~ 833 (886)
+++ ..+.|.+|+..++.+... ..+..+.. .+.-.....++..-+.++.+|+.|..|+.||...++
T Consensus 1258 s~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1258 SAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred EecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence 544 478899999998765211 11111110 122223445555567799999999999999998765
Q ss_pred cce--------eeccC---------CCCCC------------------------CCC--ccccCCCcEEEEEEccCCCcE
Q 002736 834 PAL--------SFNFN---------HADPL------------------------SGP--ETDDAAQFISSVCWRGQSSNT 870 (886)
Q Consensus 834 ~~~--------~~~~~---------~~~~~------------------------~~~--~~~~~~~~V~~v~~s~~~~~~ 870 (886)
... .+... +..+. ++. -...|...|.++++-.....+
T Consensus 1338 ~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~l 1417 (1431)
T KOG1240|consen 1338 ISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPL 1417 (1431)
T ss_pred cccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccE
Confidence 440 00000 00000 000 114577889999887666558
Q ss_pred EEEEeCCCCEEEEE
Q 002736 871 LVAANSSGNIKILE 884 (886)
Q Consensus 871 l~s~~~dg~I~iw~ 884 (886)
|++++.||.|+||.
T Consensus 1418 lvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1418 LVSSSRDGVIKIWK 1431 (1431)
T ss_pred EEEecCCCeeeecC
Confidence 99999999999995
No 194
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=1.4e-28 Score=265.65 Aligned_cols=201 Identities=17% Similarity=0.226 Sum_probs=153.0
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++++..++ +.. ....+++++||.+++|.+++.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~ 127 (284)
T cd07839 52 LLKELKHKNIVRLYD-VLH---SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKP 127 (284)
T ss_pred HHHhcCCCCeeeHHH-Hhc---cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence 444567888877666 333 3467899999988899999866556789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.+|++|||++...+....
T Consensus 128 ~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 154 (284)
T cd07839 128 QNLLINKNGELKLADFGLARAFGIPVR----------------------------------------------------- 154 (284)
T ss_pred HHEEEcCCCcEEECccchhhccCCCCC-----------------------------------------------------
Confidence 999999999999999999854321100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~-- 267 (886)
......++++|+|||.+.+.. ++.++|||||||++|||++
T Consensus 155 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~ 197 (284)
T cd07839 155 -------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197 (284)
T ss_pred -------------------------------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC
Confidence 000125688899999987754 7999999999999999997
Q ss_pred -CCCCCchhhHHhHhhccC-------------------CCC---------hhhhccChhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 -PFSTGEEKTRTMSSLRHR-------------------VLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-------------------~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e 318 (886)
||+...........+... ..+ +.....++.+.+|+.+||..||.+|||+.+
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 277 (284)
T cd07839 198 RPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277 (284)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHH
Confidence 765544332222211100 000 011224567789999999999999999999
Q ss_pred HhcCCCC
Q 002736 319 LLQSEFL 325 (886)
Q Consensus 319 il~h~~~ 325 (886)
++.||||
T Consensus 278 il~h~~f 284 (284)
T cd07839 278 ALQHPYF 284 (284)
T ss_pred HhcCCCC
Confidence 9999997
No 195
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95 E-value=2.1e-28 Score=268.70 Aligned_cols=208 Identities=16% Similarity=0.173 Sum_probs=148.0
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcC--------CCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
...+...+|++++.+++ ++.. .....++++|||.+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 49 ~~~l~~l~h~niv~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~ 126 (317)
T cd07867 49 IALLRELKHPNVIALQK-VFLS-HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA 126 (317)
T ss_pred HHHHHhCCCCCeeeEEE-EEec-cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 34455567888888766 4433 23457899999988899888742 12357899999999999999999999
Q ss_pred cCeeecccCCcceee----ccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccC
Q 002736 101 QGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (886)
Q Consensus 101 ~giiHrDlkP~NIll----~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 176 (886)
+||+||||||+|||+ +..+.+||+|||+++.........
T Consensus 127 ~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~------------------------------------- 169 (317)
T cd07867 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL------------------------------------- 169 (317)
T ss_pred CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-------------------------------------
Confidence 999999999999999 456789999999996542210000
Q ss_pred CCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCccccc
Q 002736 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 255 (886)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDI 255 (886)
.......||+.|+|||.+.+. .++.++||
T Consensus 170 --------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 199 (317)
T cd07867 170 --------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAIDI 199 (317)
T ss_pred --------------------------------------------------cccCcceecccccCcHHhcCCCccCcHHHH
Confidence 001123679999999999774 48999999
Q ss_pred chHHHHHHHHhc---CCCCCchhhH---------H--h------------Hhhcc-------------CCCC--------
Q 002736 256 YRLGVLLFELFC---PFSTGEEKTR---------T--M------------SSLRH-------------RVLP-------- 288 (886)
Q Consensus 256 wSlGvil~eLl~---pf~~~~~~~~---------~--~------------~~~~~-------------~~~~-------- 288 (886)
|||||++|||++ ||........ . + ..+.. ....
T Consensus 200 wSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (317)
T cd07867 200 WAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYM 279 (317)
T ss_pred HhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhh
Confidence 999999999999 6643221100 0 0 00000 0000
Q ss_pred -hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 289 -PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 289 -~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
.........+.+|+.+||..||.+|||+.|+|+||||
T Consensus 280 ~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 280 EKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0000112346689999999999999999999999997
No 196
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=3e-28 Score=272.74 Aligned_cols=202 Identities=15% Similarity=0.196 Sum_probs=153.7
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++..++ ++. ..+.++++||| .|++|.+++.. ..+++..++.++.||+.||.|||++||+||||||
T Consensus 97 ~~~~~hp~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp 170 (371)
T cd05622 97 MAFANSPWVVQLFY-AFQ---DDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 170 (371)
T ss_pred HHhCCCCCCCeEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 44467888888776 333 34678999999 68999999954 3589999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++++||+|||++........
T Consensus 171 ~NIll~~~~~ikL~DfG~a~~~~~~~~----------------------------------------------------- 197 (371)
T cd05622 171 DNMLLDKSGHLKLADFGTCMKMNKEGM----------------------------------------------------- 197 (371)
T ss_pred HHEEECCCCCEEEEeCCceeEcCcCCc-----------------------------------------------------
Confidence 999999999999999999854321100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC----CCcccccchHHHHHHHHh
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELF 266 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDIwSlGvil~eLl 266 (886)
......+||+.|+|||++.+.. ++.++|||||||+||||+
T Consensus 198 ------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell 241 (371)
T cd05622 198 ------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (371)
T ss_pred ------------------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHH
Confidence 0001237899999999997543 789999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccC--CCChhhhccChhhHHHHHHccCCCCCC--CCCHHHHhcCCCCCCC
Q 002736 267 C---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rps~~eil~h~~~~~~ 328 (886)
+ ||............+... ...+.....++.+.++|.+||..+|.+ |+++.++++|+||...
T Consensus 242 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 242 VGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 9 776554433333222221 112333346678889999999844433 7899999999999864
No 197
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=2.5e-28 Score=260.39 Aligned_cols=203 Identities=18% Similarity=0.181 Sum_probs=159.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+.+.+|++++..++ ++.+ .+.+++++|| .|++|.+++.+. ..+++..++.++.||+.||.|||+.||+|||||
T Consensus 57 ~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~ 131 (263)
T cd06625 57 LLKNLQHERIVQYYG-CLRD---DETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIK 131 (263)
T ss_pred HHHhCCCCCeeeeEE-EEcc---CCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 455678999888777 4443 3478899999 789999999654 468999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++|+|||+++.........
T Consensus 132 p~nilv~~~~~~~l~dfg~~~~~~~~~~~~-------------------------------------------------- 161 (263)
T cd06625 132 GANILRDSAGNVKLGDFGASKRLQTICSSG-------------------------------------------------- 161 (263)
T ss_pred HHHEEEcCCCCEEEeecccceecccccccc--------------------------------------------------
Confidence 999999999999999999985432110000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.......|+.+|+|||.+.+..++.++|||||||++|||++
T Consensus 162 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 204 (263)
T cd06625 162 -------------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204 (263)
T ss_pred -------------------------------------ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCC
Confidence 00011257889999999999889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||...+..............+.........+.+++.+||..+|.+||++.++++|+||
T Consensus 205 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 205 PPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 7765544444333333333333344556788899999999999999999999999997
No 198
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=4.5e-28 Score=267.54 Aligned_cols=211 Identities=17% Similarity=0.247 Sum_probs=157.4
Q ss_pred cccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhccc
Q 002736 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (886)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (886)
|++|... +...+|++++.+++ ++. ..+.+|++||| .|++|.+++.+....+++..++.++.||+.||+|||++
T Consensus 48 ~~~e~~~--l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (331)
T cd05597 48 FREERDV--LVNGDRRWITNLHY-AFQ---DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL 121 (331)
T ss_pred HHHHHHH--HHhCCCCCCCceEE-EEe---cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3444433 33457777777666 343 34678999999 79999999976556789999999999999999999999
Q ss_pred CeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcc
Q 002736 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (886)
Q Consensus 102 giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 181 (886)
||+||||||+|||++.++.+||+|||++.........
T Consensus 122 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 158 (331)
T cd05597 122 GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV------------------------------------------- 158 (331)
T ss_pred CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc-------------------------------------------
Confidence 9999999999999999999999999998543211000
Q ss_pred ccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-----CCCCcccccc
Q 002736 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIY 256 (886)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDIw 256 (886)
.....+||+.|+|||++.+ ..++.++|||
T Consensus 159 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 192 (331)
T cd05597 159 ----------------------------------------------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWW 192 (331)
T ss_pred ----------------------------------------------cccceeccccccCHHHHhhccccccCCCCcceee
Confidence 0111368999999999873 3478899999
Q ss_pred hHHHHHHHHhc---CCCCCchhhHHhHhhccC---CCChhhhccChhhHHHHHHccCCCCCC--CCCHHHHhcCCCCCCC
Q 002736 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (886)
Q Consensus 257 SlGvil~eLl~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rps~~eil~h~~~~~~ 328 (886)
||||++|||++ ||............+... ..++.....++.+.+|+.+||..++.. |+++.++++||||...
T Consensus 193 slG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 193 SLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred hhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 99999999999 776554333322222221 223333345678889999988764443 7899999999999864
No 199
>PHA02988 hypothetical protein; Provisional
Probab=99.95 E-value=2e-28 Score=264.00 Aligned_cols=198 Identities=17% Similarity=0.111 Sum_probs=155.8
Q ss_pred ceeecccccccCCCCCCcccccc-ccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVV 105 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiH 105 (886)
...+...+|+|++.+++ ++.+. .....++++||| .|++|.++|.+. ..+++.....++.||+.||.|||+ .|++|
T Consensus 69 ~~~l~~l~h~nIv~~~g-~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~H 146 (283)
T PHA02988 69 IKNLRRIDSNNILKIYG-FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKPY 146 (283)
T ss_pred HHHHHhcCCCCEEEEee-eEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 34555668888888877 55432 234568899999 889999999664 578999999999999999999998 59999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+|||++.++.+|++|||+++......
T Consensus 147 rdlkp~nill~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 177 (283)
T PHA02988 147 KNLTSVSFLVTENYKLKIICHGLEKILSSPP------------------------------------------------- 177 (283)
T ss_pred CcCChhhEEECCCCcEEEcccchHhhhcccc-------------------------------------------------
Confidence 9999999999999999999999985331110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC--CCCCcccccchHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLF 263 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDIwSlGvil~ 263 (886)
...+|+..|+|||.+.+ ..++.++|||||||++|
T Consensus 178 --------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~ 213 (283)
T PHA02988 178 --------------------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLW 213 (283)
T ss_pred --------------------------------------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHH
Confidence 01167888999999976 56999999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||++ ||............+.....++.....++.+.+|+.+||+.||.+|||+.|+++
T Consensus 214 el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 214 EIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 9999 886655444333333333333333456788999999999999999999999985
No 200
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=1.8e-26 Score=251.22 Aligned_cols=276 Identities=21% Similarity=0.323 Sum_probs=230.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccc-eEEecCCCCeee-EEEeCCCCCeEEEecCCCc
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSS-ICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~-~~~~~~~~~I~~-l~~~~~~~~~las~s~Dg~ 641 (886)
+.+|+..|+.+++.+. ..++++|.||++++|+-... .... .....+.+-|.+ +++.+.++..+++|+.|++
T Consensus 10 l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~------~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 10 LEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGK------QYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT 82 (745)
T ss_pred eccCccchheeEecCC-eEEeecCCCCceeeeeccCc------ccccceecccCcceeeccceeccccCcceEeecccce
Confidence 4689999999998865 48899999999999986431 1111 122346666666 8887756778999999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCC
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDS 721 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 721 (886)
|.+|...+..+...+++|...|.|++... ++. ++|||-|.++++|-+.... . ....|.+.|..|..-|.
T Consensus 83 i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~~l~-------~-~l~gH~asVWAv~~l~e- 151 (745)
T KOG0301|consen 83 IIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIGELV-------Y-SLQGHTASVWAVASLPE- 151 (745)
T ss_pred EEEEecCCCCchhhhhccccceeeeecCC-cCc-eEecccccceEEecchhhh-------c-ccCCcchheeeeeecCC-
Confidence 99999999999999999999999999874 555 9999999999999886521 1 13456788999999998
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 801 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~ 801 (886)
. .+++||+|.+|++|.- ++ .+.+|.||.+.|..+++.+...|+|++.||.|++|++. + ..+..+.||++
T Consensus 152 ~-~~vTgsaDKtIklWk~--~~-~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~-g------e~l~~~~ghtn 220 (745)
T KOG0301|consen 152 N-TYVTGSADKTIKLWKG--GT-LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD-G------EVLLEMHGHTN 220 (745)
T ss_pred C-cEEeccCcceeeeccC--Cc-hhhhhccchhheeeeEEecCCCeEeecCCceEEEEecc-C------ceeeeeeccce
Confidence 3 8999999999999975 33 48899999999999999988899999999999999994 3 45899999999
Q ss_pred ceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEE
Q 002736 802 VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 881 (886)
Q Consensus 802 ~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~ 881 (886)
-|.++....+++.|+|+++|++++||+.. +..+.+... ...|+++++-++|+ +++|++||.|+
T Consensus 221 ~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lP-------------ttsiWsa~~L~NgD--Ivvg~SDG~Vr 283 (745)
T KOG0301|consen 221 FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLP-------------TTSIWSAKVLLNGD--IVVGGSDGRVR 283 (745)
T ss_pred EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecC-------------ccceEEEEEeeCCC--EEEeccCceEE
Confidence 99999999999999999999999999987 455444432 23499999999999 99999999999
Q ss_pred EEEe
Q 002736 882 ILEM 885 (886)
Q Consensus 882 iw~l 885 (886)
||..
T Consensus 284 VfT~ 287 (745)
T KOG0301|consen 284 VFTV 287 (745)
T ss_pred EEEe
Confidence 9963
No 201
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2e-27 Score=261.28 Aligned_cols=288 Identities=22% Similarity=0.348 Sum_probs=228.7
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECC
Q 002736 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (886)
Q Consensus 569 ~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~ 648 (886)
....+|..+++-..++.+|. ..++||.+........-.+.......-...+..|.|+....++||+++..|.|.+||+.
T Consensus 40 ~~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdln 118 (839)
T KOG0269|consen 40 AKANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLN 118 (839)
T ss_pred cccceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecC
Confidence 34556777898888888887 57888887653222111111000111223466799998889999999999999999998
Q ss_pred C---ceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCCCcE
Q 002736 649 R---SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDSGRS 724 (886)
Q Consensus 649 t---~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~ 724 (886)
. .+.+..|.+|+..|++++|++..+++|++||.||+||+||++. .....++.. ...|..|+|+|..++.
T Consensus 119 k~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~-------~~S~~t~~~nSESiRDV~fsp~~~~~ 191 (839)
T KOG0269|consen 119 KSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS-------KKSKSTFRSNSESIRDVKFSPGYGNK 191 (839)
T ss_pred ccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec-------ccccccccccchhhhceeeccCCCce
Confidence 7 5667789999999999999999999999999999999999998 444444443 4569999999998999
Q ss_pred EEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCce
Q 002736 725 LAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 803 (886)
Q Consensus 725 l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v 803 (886)
|+++...|.+.+||+|..+.+...+.+|.++|.++.|+ ++.+|||||.|+.|+|||...... .++.++. ...++
T Consensus 192 F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~----~~~~tIn-Tiapv 266 (839)
T KOG0269|consen 192 FASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA----KPKHTIN-TIAPV 266 (839)
T ss_pred EEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc----cceeEEe-eccee
Confidence 99999999999999999998889999999999999997 999999999999999999987643 4455543 34689
Q ss_pred eEEEEecCCC-EEEEEcC--CCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCE
Q 002736 804 NFVGLSVWDG-YVATGSE--TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNI 880 (886)
Q Consensus 804 ~~v~~sp~g~-~lasgs~--Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I 880 (886)
..|.|-|... .||+++. |-.|+|||+..+-.. -..+..|...|+.++|.......|.+++-||+|
T Consensus 267 ~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP------------~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv 334 (839)
T KOG0269|consen 267 GRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIP------------YATFLEHTDSVTGIAWDSGDRINLWSCSKDGTV 334 (839)
T ss_pred eeeeeccCccchhhhhhccccceEEEEeecccccc------------ceeeeccCccccceeccCCCceeeEeecCccHH
Confidence 9999999976 5777764 889999999875322 134466788899999976444378899999986
Q ss_pred E
Q 002736 881 K 881 (886)
Q Consensus 881 ~ 881 (886)
.
T Consensus 335 ~ 335 (839)
T KOG0269|consen 335 L 335 (839)
T ss_pred H
Confidence 4
No 202
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=1.2e-25 Score=256.52 Aligned_cols=249 Identities=15% Similarity=0.188 Sum_probs=189.3
Q ss_pred EeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCce--------EEEEec
Q 002736 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--------VLTEMR 657 (886)
Q Consensus 586 ~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~--------~~~~~~ 657 (886)
||.++.|++|+.... .......+|...|.+++|+|..+++||||+.||+|+|||+.++. ++..+.
T Consensus 50 GG~~gvI~L~~~~r~-------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~ 122 (568)
T PTZ00420 50 GGLIGAIRLENQMRK-------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILK 122 (568)
T ss_pred CCceeEEEeeecCCC-------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEee
Confidence 677899999987642 11123346889999999999768999999999999999997642 345678
Q ss_pred ccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q 002736 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYY 737 (886)
Q Consensus 658 ~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vw 737 (886)
+|...|++++|+|....+|++|+.|++|+|||+++ +..+..+.+...|.+++|+|+ |.+|++++.|+.|++|
T Consensus 123 gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~t-------g~~~~~i~~~~~V~Slswspd-G~lLat~s~D~~IrIw 194 (568)
T PTZ00420 123 GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIEN-------EKRAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHMHII 194 (568)
T ss_pred cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCC-------CcEEEEEecCCcEEEEEECCC-CCEEEEEecCCEEEEE
Confidence 89999999999994344678999999999999998 555556666778999999999 8999999999999999
Q ss_pred ecCCCCcceEEEecCCCCeEEE-----Eec-CCCEEEEEECCC----cEEEEeCCCCCccccCCCceEeec--CCCceeE
Q 002736 738 DLRNSKIPLCTLIGHNKTVSYV-----KFV-DATTLVSASTDN----TLKLWDLSMCTSRVIDTPLHSFTG--HTNVKNF 805 (886)
Q Consensus 738 Dlr~~~~~~~~~~~h~~~V~~v-----~f~-~~~~l~sgs~Dg----~i~lwd~~~~~~~~~~~~~~~~~~--h~~~v~~ 805 (886)
|++++.. +..+.+|...+... .|+ ++.+|+|++.|+ +|+|||++... .++..+.. +.+.+..
T Consensus 195 D~Rsg~~-i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~-----~pl~~~~ld~~~~~L~p 268 (568)
T PTZ00420 195 DPRKQEI-ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTT-----SALVTMSIDNASAPLIP 268 (568)
T ss_pred ECCCCcE-EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCC-----CceEEEEecCCccceEE
Confidence 9999874 78899998765433 233 778899988774 79999999643 45555433 3333333
Q ss_pred EEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCC
Q 002736 806 VGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS 867 (886)
Q Consensus 806 v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~ 867 (886)
....++|.++++|+.|++|++|++..+. +..+. + ..+..++.+++|.|+.
T Consensus 269 ~~D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~----------~-~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 269 HYDESTGLIYLIGKGDGNCRYYQHSLGS-IRKVN----------E-YKSCSPFRSFGFLPKQ 318 (568)
T ss_pred eeeCCCCCEEEEEECCCeEEEEEccCCc-EEeec----------c-cccCCCccceEEcccc
Confidence 3344558899999999999999997653 21111 1 1134567788888863
No 203
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=4.6e-26 Score=225.93 Aligned_cols=275 Identities=16% Similarity=0.263 Sum_probs=220.0
Q ss_pred CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEE
Q 002736 567 SSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (886)
Q Consensus 567 h~~~V~sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iW 645 (886)
..+.|.+|+|+| ...++++++.|++||+|+++.. ....+.....|.++|.+++|+. +++.+++|+.|+.+++|
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-----g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-----GQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecC-----CcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEE
Confidence 467899999999 5567779999999999999762 1122334456899999999997 78999999999999999
Q ss_pred ECCCceEEEEecccCCcEEEEEEccCCCC--EEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCc
Q 002736 646 DVSRSQVLTEMREHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGR 723 (886)
Q Consensus 646 d~~t~~~~~~~~~h~~~v~~v~~~p~~~~--~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 723 (886)
|+.+++. ..+..|.++|.++.|-+ ... .|++||-|.+|+.||.++ ..++.++..+..+.++..- ..
T Consensus 100 DL~S~Q~-~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~-------~~pv~t~~LPeRvYa~Dv~---~p 167 (347)
T KOG0647|consen 100 DLASGQV-SQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRS-------SNPVATLQLPERVYAADVL---YP 167 (347)
T ss_pred EccCCCe-eeeeecccceeEEEEec-CCCcceeEecccccceeecccCC-------CCeeeeeeccceeeehhcc---Cc
Confidence 9999965 45678999999999986 444 899999999999999999 8888999999999988875 34
Q ss_pred EEEEEeCCCeEEEEecCCCCcceEEEe-cCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCC
Q 002736 724 SLAFGSADHRIYYYDLRNSKIPLCTLI-GHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 801 (886)
Q Consensus 724 ~l~~gs~Dg~I~vwDlr~~~~~~~~~~-~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~ 801 (886)
+++++.++..|.+|+|+++........ .-+-.+.||+.. +.+..+.||..|.+-+..+..+.. .--.+|+.|..
T Consensus 168 m~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~----~~nFtFkCHR~ 243 (347)
T KOG0647|consen 168 MAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP----KDNFTFKCHRS 243 (347)
T ss_pred eeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc----cCceeEEEecc
Confidence 788899999999999987643222211 122346777765 777779999999999999987532 22456777763
Q ss_pred ---------ceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEE
Q 002736 802 ---------VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV 872 (886)
Q Consensus 802 ---------~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~ 872 (886)
.|++|+|+|.-..|+|.|.||++.+||......+.+. ..|.++|.+++|+.+|. ++|
T Consensus 244 ~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s-------------~~~~qpItcc~fn~~G~-ifa 309 (347)
T KOG0647|consen 244 TNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS-------------ETHPQPITCCSFNRNGS-IFA 309 (347)
T ss_pred CCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc-------------CcCCCccceeEecCCCC-EEE
Confidence 4789999999999999999999999999887666432 34678899999999999 665
Q ss_pred -EEeCC
Q 002736 873 -AANSS 877 (886)
Q Consensus 873 -s~~~d 877 (886)
+.+.|
T Consensus 310 YA~gYD 315 (347)
T KOG0647|consen 310 YALGYD 315 (347)
T ss_pred EEeecc
Confidence 44444
No 204
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95 E-value=3.2e-28 Score=271.34 Aligned_cols=201 Identities=21% Similarity=0.215 Sum_probs=150.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++.+++ ++. ..+.++++||| .+++|... ...++..+..|++||+.||.|||++||+||||
T Consensus 124 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl 194 (353)
T PLN00034 124 EILRDVNHPNVVKCHD-MFD---HNGEIQVLLEFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDI 194 (353)
T ss_pred HHHHhCCCCCcceeee-Eec---cCCeEEEEEecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence 3445567899888776 443 34678899999 77887653 23567888999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+||+|||+++.......
T Consensus 195 kp~NIll~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------- 223 (353)
T PLN00034 195 KPSNLLINSAKNVKIADFGVSRILAQTMD--------------------------------------------------- 223 (353)
T ss_pred CHHHEEEcCCCCEEEcccccceecccccc---------------------------------------------------
Confidence 99999999999999999999854321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-----CCCCcccccchHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLF 263 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDIwSlGvil~ 263 (886)
.....+||..|+|||.+.. ..++.++|||||||++|
T Consensus 224 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~ 264 (353)
T PLN00034 224 ---------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL 264 (353)
T ss_pred ---------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHH
Confidence 0011278999999998853 22467999999999999
Q ss_pred HHhc---CCCCCch--hhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 264 ELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 264 eLl~---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
||++ ||..... ....+..+.....+.......+++.+||.+||..||++||++.|+++||||....
T Consensus 265 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 265 EFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 9998 7753221 1222222222223333445667889999999999999999999999999998754
No 205
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95 E-value=3.8e-28 Score=261.26 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=155.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++..+. .+. ....++++||| .|++|.+++... ...+++..+..++.||+.||.|||++||+|||
T Consensus 45 ~il~~l~hp~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 45 EILEKVNSPFIVNLAY-AFE---SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred HHHHhcCCCcEEEEEE-EEe---cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 3456678888887665 332 34678999999 789999888433 34688999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++|+|||++.......
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~--------------------------------------------------- 149 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGK--------------------------------------------------- 149 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCc---------------------------------------------------
Confidence 99999999999999999999884331110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 150 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~ 189 (277)
T cd05607 150 ----------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA 189 (277)
T ss_pred ----------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHh
Confidence 0011257889999999998889999999999999999998
Q ss_pred ---CCCCCchhh---HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH----HHHhcCCCCCCCc
Q 002736 268 ---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (886)
Q Consensus 268 ---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~----~eil~h~~~~~~~ 329 (886)
||....... ...........+.......+++.+|+.+||++||.+||++ .+++.|+||+...
T Consensus 190 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 190 GRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred CCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 775433221 1112222212222223456778899999999999999999 6788999998753
No 206
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.95 E-value=5e-28 Score=259.49 Aligned_cols=199 Identities=16% Similarity=0.188 Sum_probs=150.5
Q ss_pred ccccCCCCCCccccccc---cCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 36 DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~---~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+|++++..++ .+.... ..+.++++||| .+++|.+++... ...+++..++.++.||+.||.|||++||+||||||
T Consensus 61 ~h~~i~~~~~-~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~ 139 (272)
T cd06637 61 HHRNIATYYG-AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG 139 (272)
T ss_pred CCCCeeeEee-EEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence 5788877666 443222 13568899999 678999999653 35689999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++........
T Consensus 140 ~nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 166 (272)
T cd06637 140 QNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------------------- 166 (272)
T ss_pred HHEEECCCCCEEEccCCCceecccccc-----------------------------------------------------
Confidence 999999999999999999853311100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHHHHHH
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvil~eL 265 (886)
......|+..|+|||++. +..++.++|||||||++|||
T Consensus 167 -------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el 209 (272)
T cd06637 167 -------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209 (272)
T ss_pred -------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence 011136788999999986 33588899999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
++ ||.........................+..+.+|+.+||..+|.+||++.+++.||||
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 99 6654443333332222221112222345678899999999999999999999999997
No 207
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95 E-value=5.8e-29 Score=244.42 Aligned_cols=201 Identities=17% Similarity=0.200 Sum_probs=162.1
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrDlkP 110 (886)
+-+++-+-++..||- .....-..|.||+.+..+..+|+.-.+++++..+=++...|+.||.||.. +||||||+||
T Consensus 145 ~~s~dcpyIV~c~Gy----Fi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP 220 (391)
T KOG0983|consen 145 LKSHDCPYIVQCFGY----FITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 220 (391)
T ss_pred hhccCCCeeeeeeeE----EeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence 333455666776661 22333456789998888888887777889999999999999999999976 5999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++..|++|+||||++-..-.
T Consensus 221 SNILlDe~GniKlCDFGIsGrlvd-------------------------------------------------------- 244 (391)
T KOG0983|consen 221 SNILLDERGNIKLCDFGISGRLVD-------------------------------------------------------- 244 (391)
T ss_pred cceEEccCCCEEeecccccceeec--------------------------------------------------------
Confidence 999999999999999999833211
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC---CCCCcccccchHHHHHHHHhc
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDIwSlGvil~eLl~ 267 (886)
++..+...|-+.|||||.+.- ..|+..+||||||+.|+||.|
T Consensus 245 -----------------------------------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 245 -----------------------------------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred -----------------------------------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 112333478999999999863 349999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhh---ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||.........+..+..... |.+. ..++.+.+|+..||.+|+.+||...++|+|||+...
T Consensus 290 g~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 290 GQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 99888888888888776433 3332 257889999999999999999999999999998754
No 208
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=5.9e-28 Score=265.67 Aligned_cols=182 Identities=20% Similarity=0.307 Sum_probs=145.7
Q ss_pred CCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCC
Q 002736 54 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (886)
Q Consensus 54 ~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~ 132 (886)
.+.+|++||| .|++|.+++.+. ..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 73 VDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred CCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 4678999999 789999999654 56899999999999999999999999999999999999999999999999998532
Q ss_pred CCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccc
Q 002736 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (886)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (886)
.....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (323)
T cd05615 152 MVDGV--------------------------------------------------------------------------- 156 (323)
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 11100
Q ss_pred cccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCCh
Q 002736 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (886)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~ 289 (886)
......||+.|+|||++.+..++.++|||||||++|||++ ||............+.... .
T Consensus 157 ---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--~ 219 (323)
T cd05615 157 ---------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--S 219 (323)
T ss_pred ---------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--C
Confidence 0011268999999999998889999999999999999999 7765544333333332222 1
Q ss_pred hhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCC
Q 002736 290 QLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (886)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~ 328 (886)
.+...++.+.+++.+||..+|.+|++ ..++++||||...
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 22345677889999999999999997 4789999999864
No 209
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.95 E-value=4.4e-28 Score=261.93 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=157.4
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
...+.+.+|++++..++ .+. ..+.++++||| .|++|.+++... ...+++.++..++.||+.||.|||++||+||
T Consensus 51 ~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (285)
T cd05605 51 KQILEKVNSRFVVSLAY-AYE---TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYR 126 (285)
T ss_pred HHHHHhcCCCCEeeeee-eec---CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEec
Confidence 34555668888888766 333 23578999999 789999888543 3468999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++..+.++++|||++.......
T Consensus 127 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-------------------------------------------------- 156 (285)
T cd05605 127 DLKPENILLDDYGHIRISDLGLAVEIPEGE-------------------------------------------------- 156 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecCCCC--------------------------------------------------
Confidence 999999999999999999999884321100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
.....+|++.|+|||.+.+..++.++||||+||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~ 195 (285)
T cd05605 157 -----------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI 195 (285)
T ss_pred -----------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHH
Confidence 000126789999999999888999999999999999999
Q ss_pred c---CCCCCchhhH---HhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 267 C---PFSTGEEKTR---TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 267 ~---pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
+ ||........ ....+.. ..+..+...++.+.+|+.+||..||.+|| +++++++||||....
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 196 EGKSPFRQRKEKVKREEVERRVKE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred HCCCCCCCCchhhHHHHHHHHhhh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 8 7765433221 1112221 11222233557788999999999999999 899999999998743
No 210
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=9.4e-28 Score=254.79 Aligned_cols=200 Identities=19% Similarity=0.240 Sum_probs=159.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+.+.+|++++..++ .+. ..+.++++||| .|++|.+++... ...+++..+..++.||+.||.|||++||+|+||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl 127 (256)
T cd08529 52 VLAKLDSSYIIRYYE-SFL---DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDI 127 (256)
T ss_pred HHHhcCCCCeehhee-eec---cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 456678999988777 333 34678999998 789999999653 457899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||+++.......
T Consensus 128 ~~~nili~~~~~~~l~df~~~~~~~~~~~--------------------------------------------------- 156 (256)
T cd08529 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTN--------------------------------------------------- 156 (256)
T ss_pred CcceEEEeCCCCEEEcccccceeccCccc---------------------------------------------------
Confidence 99999999999999999998854321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......|+++|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 197 (256)
T cd08529 157 ---------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG 197 (256)
T ss_pred ---------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhC
Confidence 0011267889999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||....... ..........++......+.+.+++.+||+.+|++||++.++++|||+
T Consensus 198 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 198 KHPFDANNQGA-LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCCCCCCCHHH-HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 776554333 333333344444444556788999999999999999999999999986
No 211
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=6e-26 Score=236.83 Aligned_cols=283 Identities=19% Similarity=0.264 Sum_probs=226.8
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcc----cc-----cccceEEe--cCCCCeeeEEEeCCCCCeE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----RD-----IHYPVVEM--ASRSKLSSICWNSYIKSQI 633 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~----~~-----~~~~~~~~--~~~~~I~~l~~~~~~~~~l 633 (886)
..|.-+|+|++++||+++.++++.+++|.=|+..+..... .+ ...+.... .|...|.+++.++ ++.+|
T Consensus 139 ~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~-Dgkyl 217 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS-DGKYL 217 (479)
T ss_pred ccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC-CCcEE
Confidence 4588899999999999999999999999999987643220 00 01112222 6788899999998 79999
Q ss_pred EEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeE
Q 002736 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVC 713 (886)
Q Consensus 634 as~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~ 713 (886)
|+|+.|..|.|||.++.+.+..+.+|.+.|.+++|-. ..+.|.+++.|.+|++|++.....+. ..+.|+..|.
T Consensus 218 atgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~ve------tlyGHqd~v~ 290 (479)
T KOG0299|consen 218 ATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVE------TLYGHQDGVL 290 (479)
T ss_pred EecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhHHHH------HHhCCcccee
Confidence 9999999999999999999999999999999999985 78899999999999999999843221 2245667788
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEECCCcEEEEeCCCCCccccCCCc
Q 002736 714 CVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPL 793 (886)
Q Consensus 714 ~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~ 793 (886)
.|.-..- .+.+.+|+.|.++++|++.... ...+.+|...+-||+|.+...++|||.||.|.||++-+.+ |+
T Consensus 291 ~IdaL~r-eR~vtVGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKk------pl 361 (479)
T KOG0299|consen 291 GIDALSR-ERCVTVGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKK------PL 361 (479)
T ss_pred eechhcc-cceEEeccccceeEEEeccccc--eeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccC------ce
Confidence 8887766 6777788899999999995443 5678899999999999999999999999999999998763 44
Q ss_pred eEee------------cCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEE
Q 002736 794 HSFT------------GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSV 861 (886)
Q Consensus 794 ~~~~------------~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 861 (886)
.+.. .+..+|++|+..|...++|+||.+|.|++|-+..+-.....-+. -.-.++|+++
T Consensus 362 f~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~----------ls~~GfVNsl 431 (479)
T KOG0299|consen 362 FTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYS----------LSLVGFVNSL 431 (479)
T ss_pred eEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeee----------cccccEEEEE
Confidence 4332 12238999999999999999999999999999887332111110 0124689999
Q ss_pred EEccCCCcEEEEEe
Q 002736 862 CWRGQSSNTLVAAN 875 (886)
Q Consensus 862 ~~s~~~~~~l~s~~ 875 (886)
+|+++|. .+++|-
T Consensus 432 ~f~~sgk-~ivagi 444 (479)
T KOG0299|consen 432 AFSNSGK-RIVAGI 444 (479)
T ss_pred EEccCCC-EEEEec
Confidence 9999999 666553
No 212
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=6.5e-28 Score=266.24 Aligned_cols=204 Identities=15% Similarity=0.213 Sum_probs=156.2
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++.+++ ++. ..+.+|++||| .|++|.++|.+....+++..++.++.||+.||+|||++||+||||||
T Consensus 55 l~~~~~~~i~~l~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp 130 (331)
T cd05624 55 LVNGDCQWITTLHY-AFQ---DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKP 130 (331)
T ss_pred HHhCCCCCEeeEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCch
Confidence 34457777777665 333 34678999999 89999999976556789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+|||++.++.+||+|||++.....+..
T Consensus 131 ~Nill~~~~~~kl~DfG~a~~~~~~~~----------------------------------------------------- 157 (331)
T cd05624 131 DNVLLDMNGHIRLADFGSCLKMNQDGT----------------------------------------------------- 157 (331)
T ss_pred HHEEEcCCCCEEEEeccceeeccCCCc-----------------------------------------------------
Confidence 999999999999999999854321100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-----CCCCcccccchHHHHHHHH
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDIwSlGvil~eL 265 (886)
......+||+.|+|||.+.+ ..++.++|||||||+||||
T Consensus 158 ------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el 201 (331)
T cd05624 158 ------------------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201 (331)
T ss_pred ------------------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence 00111368999999999875 4588999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccC---CCChhhhccChhhHHHHHHccCCCCCC--CCCHHHHhcCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rps~~eil~h~~~~~~ 328 (886)
++ ||................ .+++.....++.+.+++.+||..++.+ |++++++++|+||...
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 202 LYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 99 886554433333332222 133334456778889999999876654 4789999999999864
No 213
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.95 E-value=9.1e-28 Score=255.10 Aligned_cols=202 Identities=16% Similarity=0.227 Sum_probs=156.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++..++ .+. .....++++||| .+++|.+++... ...+++.+++.++.||+.||.|||++||+|+|
T Consensus 51 ~~l~~l~~~~i~~~~~-~~~--~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~d 127 (257)
T cd08223 51 QLLSQLKHPNIVAYRE-SWE--GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRD 127 (257)
T ss_pred HHHHhCCCCCeeeeee-eec--CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 3455567888877655 221 123457899999 788999999653 34689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||++........
T Consensus 128 i~p~nil~~~~~~~~l~df~~~~~~~~~~~-------------------------------------------------- 157 (257)
T cd08223 128 LKTQNVFLTRTNIIKVGDLGIARVLENQCD-------------------------------------------------- 157 (257)
T ss_pred CCchhEEEecCCcEEEecccceEEecccCC--------------------------------------------------
Confidence 999999999999999999999853311100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 158 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08223 158 ----------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMAT 197 (257)
T ss_pred ----------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHc
Confidence 0011257888999999998889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||...... .....+.....++.....++.+.+|+.+||..+|.+||++.++++||||
T Consensus 198 g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 198 LKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 66544333 2333333344444444566788999999999999999999999999997
No 214
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=5e-28 Score=267.32 Aligned_cols=202 Identities=18% Similarity=0.184 Sum_probs=152.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhccc-Ceeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-giiHrD 107 (886)
..+...+|++++..++ ++.+ .+.++++||| .|++|.++|.+. ..+++..+..++.||+.||.|||++ +|+|||
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~d 129 (333)
T cd06650 55 QVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 129 (333)
T ss_pred HHHHHCCCCcccceeE-EEEE---CCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 3445567889888777 4443 4678999999 689999999654 5689999999999999999999985 799999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+|++|||++......
T Consensus 130 lkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------------------------- 157 (333)
T cd06650 130 VKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------------- 157 (333)
T ss_pred CChhhEEEcCCCCEEEeeCCcchhhhhh----------------------------------------------------
Confidence 9999999999999999999998432100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 158 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~ 197 (333)
T cd06650 158 ----------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAI 197 (333)
T ss_pred ----------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 0001267889999999998889999999999999999998
Q ss_pred ---CCCCCchhhHHh-------------------------------------------HhhccCCCChhhh-ccChhhHH
Q 002736 268 ---PFSTGEEKTRTM-------------------------------------------SSLRHRVLPPQLL-LKFPKEAS 300 (886)
Q Consensus 268 ---pf~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~-~~~~~~~~ 300 (886)
||.......... ..+.....+.... ...+++.+
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (333)
T cd06650 198 GRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQD 277 (333)
T ss_pred CCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHH
Confidence 775432211100 0000000011111 12356789
Q ss_pred HHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 301 FCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 301 li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|+.+||++||.+|||+.|+++||||+..
T Consensus 278 li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 278 FVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 9999999999999999999999999754
No 215
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=3e-25 Score=252.47 Aligned_cols=232 Identities=17% Similarity=0.233 Sum_probs=182.1
Q ss_pred ccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCcccCcccccccce-EEecCCCCeeeEEEeCCCCCeEEEecCCCc
Q 002736 564 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 564 ~~~h~~~V~sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~-~~~~~~~~I~~l~~~~~~~~~las~s~Dg~ 641 (886)
+.+|.+.|.+++|+| ++.+||+|+.|++|+|||+....... ....++ ...+|...|.+|+|+|...++|++|+.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~-~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQ-NISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcccc-ccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 568999999999999 88999999999999999997532111 111222 344688999999999966689999999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCC--CeEEEEEeC
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKA--NVCCVQFPL 719 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~--~v~~v~~sp 719 (886)
|+|||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|+|||+++ +..+..+..+. .+..+.|.+
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rs-------g~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRD-------GTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCC-------CcEEEEEecCCCCcceEEEEcC
Confidence 99999999999999999999999999998 899999999999999999998 55565555432 345778998
Q ss_pred CCCcEEEE-E---eCCCeEEEEecCCCCcceEEEecCC-CCeEEEEec-CCCEEEEEE-CCCcEEEEeCCCCCccccCCC
Q 002736 720 DSGRSLAF-G---SADHRIYYYDLRNSKIPLCTLIGHN-KTVSYVKFV-DATTLVSAS-TDNTLKLWDLSMCTSRVIDTP 792 (886)
Q Consensus 720 ~~~~~l~~-g---s~Dg~I~vwDlr~~~~~~~~~~~h~-~~V~~v~f~-~~~~l~sgs-~Dg~i~lwd~~~~~~~~~~~~ 792 (886)
+ +..+++ | +.|+.|++||+++...++.....+. ..+....|+ ++.+|++|+ .|+.|++||+.... +
T Consensus 222 ~-~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~------~ 294 (493)
T PTZ00421 222 R-KDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER------L 294 (493)
T ss_pred C-CCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc------e
Confidence 8 455554 4 3489999999998876776665444 345555565 888888887 59999999998763 3
Q ss_pred ceEee-cCCCceeEEEEecC
Q 002736 793 LHSFT-GHTNVKNFVGLSVW 811 (886)
Q Consensus 793 ~~~~~-~h~~~v~~v~~sp~ 811 (886)
+..+. .+..++..++|.|.
T Consensus 295 ~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 295 TFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred EEEeeccCCCCCcceEeccc
Confidence 43332 24556788888885
No 216
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=1e-25 Score=256.31 Aligned_cols=269 Identities=23% Similarity=0.324 Sum_probs=234.0
Q ss_pred ccccccccccceEEeeecCceEEEE-eccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 534 SGWINPFLEGLCKYLSFSKLRVKAD-LNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 534 ~~~~~~~~d~~~~~w~~~~~~~~~~-l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
..++.+..+.++++|+..++..... + .+|.+.|.+++|..-+.++++|+.|++++|||+.+.. +...
T Consensus 219 ~~~~~~s~~~tl~~~~~~~~~~i~~~l-----~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~-------C~~~ 286 (537)
T KOG0274|consen 219 GFFKSGSDDSTLHLWDLNNGYLILTRL-----VGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE-------CTHS 286 (537)
T ss_pred CeEEecCCCceeEEeecccceEEEeec-----cCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc-------EEEE
Confidence 3567888999999999998887755 5 7899999999999878899999999999999987742 3334
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
..+|.+.|.|+... +..+++|+.|.+|++|++++++.+..+.+|..+|.++..+ +.++++|+.||+|++||+.+
T Consensus 287 l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 287 LQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred ecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhh
Confidence 45799999999876 4578889999999999999999999999999999999986 68999999999999999998
Q ss_pred hhhhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEE
Q 002736 693 AILLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAS 771 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs 771 (886)
..++.++.. ...|.++.+.+. ..+++|+.|++|++||+++...++.++.+|..-|..+.+ .++.|++++
T Consensus 361 -------~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~ 430 (537)
T KOG0274|consen 361 -------GKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSS 430 (537)
T ss_pred -------ceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-ccceeEecc
Confidence 777777764 567999988753 689999999999999999983369999999999877766 578999999
Q ss_pred CCCcEEEEeCCCCCccccCCCceEeec-CCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceee
Q 002736 772 TDNTLKLWDLSMCTSRVIDTPLHSFTG-HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 838 (886)
Q Consensus 772 ~Dg~i~lwd~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~ 838 (886)
.|++|++||...+ .+++++.+ |...|.++++. ...+++++.|+++++||+.+++....+
T Consensus 431 aD~~Ik~WD~~~~------~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 431 ADGTIKLWDAEEG------ECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred ccccEEEeecccC------ceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence 9999999999988 45888888 77888888876 578999999999999999999887655
No 217
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=6.9e-28 Score=286.39 Aligned_cols=205 Identities=18% Similarity=0.185 Sum_probs=156.3
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---CCCcChHHHHHHHHHHHHHHHhhccc---
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ--- 101 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~--- 101 (886)
...+....|++++.+++ ++.+ ...+.+|++||| .+++|.++|... ...+++..++.|+.||+.||.|||+.
T Consensus 63 I~IL~~L~HPNIVrl~d-~f~d-e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~ 140 (1021)
T PTZ00266 63 VNVMRELKHKNIVRYID-RFLN-KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDG 140 (1021)
T ss_pred HHHHHHcCCCCcCeEEE-EEEe-cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34455678899988777 3322 234578999999 788999999542 35689999999999999999999984
Q ss_pred ----CeeecccCCcceeeccC-----------------CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhh
Q 002736 102 ----GIVVHNVRPSCFVMSSF-----------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (886)
Q Consensus 102 ----giiHrDlkP~NIll~~~-----------------~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (886)
+||||||||+||||+.. ..+||+|||++.......
T Consensus 141 ~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------------------ 196 (1021)
T PTZ00266 141 PNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------------------ 196 (1021)
T ss_pred cccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc------------------------
Confidence 59999999999999642 348899999885432110
Q ss_pred hhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceec
Q 002736 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (886)
Q Consensus 161 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (886)
.....+||+.|+|
T Consensus 197 -------------------------------------------------------------------~~~s~vGTp~YmA 209 (1021)
T PTZ00266 197 -------------------------------------------------------------------MAHSCVGTPYYWS 209 (1021)
T ss_pred -------------------------------------------------------------------cccccCCCccccC
Confidence 0011278999999
Q ss_pred ccccCC--CCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC
Q 002736 241 PEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 241 PE~~~~--~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps 315 (886)
||++.+ ..++.++||||||||||||++ ||.........+..+...... .....++.+.+||..||..+|.+||+
T Consensus 210 PEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPS 288 (1021)
T PTZ00266 210 PELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPS 288 (1021)
T ss_pred HHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcC
Confidence 999865 348999999999999999999 886655544444444433222 22345678899999999999999999
Q ss_pred HHHHhcCCCCCC
Q 002736 316 MGELLQSEFLNE 327 (886)
Q Consensus 316 ~~eil~h~~~~~ 327 (886)
+.|+|+|+|+..
T Consensus 289 a~QlL~h~~ik~ 300 (1021)
T PTZ00266 289 ALQCLGYQIIKN 300 (1021)
T ss_pred HHHHhccHHHhh
Confidence 999999999863
No 218
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=1e-27 Score=261.17 Aligned_cols=207 Identities=14% Similarity=0.185 Sum_probs=155.2
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
...+...+|++++..++ ++. ..+.++++|||.+++|.+++.+....+++..++.++.||+.||.|||++||+|+||
T Consensus 55 ~~~l~~l~h~nI~~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dl 130 (301)
T cd07873 55 VSLLKDLKHANIVTLHD-IIH---TEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDL 130 (301)
T ss_pred HHHHHhcCCCCcceEEE-EEe---cCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence 34455567889888777 433 34678999999888999999766667899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++........
T Consensus 131 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------------- 159 (301)
T cd07873 131 KPQNLLINERGELKLADFGLARAKSIPTK--------------------------------------------------- 159 (301)
T ss_pred CHHHEEECCCCcEEECcCcchhccCCCCC---------------------------------------------------
Confidence 99999999999999999999853211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~ 267 (886)
......+++.|+|||.+.+. .++.++|||||||++|||++
T Consensus 160 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t 200 (301)
T cd07873 160 ---------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST 200 (301)
T ss_pred ---------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh
Confidence 00011568889999998764 48899999999999999999
Q ss_pred ---CCCCCchhhHHhH--hhccC------------------CCCh--------hhhccChhhHHHHHHccCCCCCCCCCH
Q 002736 268 ---PFSTGEEKTRTMS--SLRHR------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 268 ---pf~~~~~~~~~~~--~~~~~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
||........... ..... ..+. .....++.+.+||.+||+.||.+|||+
T Consensus 201 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~ 280 (301)
T cd07873 201 GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA 280 (301)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence 6644332211110 00000 0000 012345667899999999999999999
Q ss_pred HHHhcCCCCCCCc
Q 002736 317 GELLQSEFLNEPR 329 (886)
Q Consensus 317 ~eil~h~~~~~~~ 329 (886)
.|+|+||||....
T Consensus 281 ~eil~h~~f~~~~ 293 (301)
T cd07873 281 EEAMKHPYFHCLG 293 (301)
T ss_pred HHHhcCccccccc
Confidence 9999999998653
No 219
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.95 E-value=1e-26 Score=224.18 Aligned_cols=281 Identities=17% Similarity=0.245 Sum_probs=232.2
Q ss_pred cCCCCCEEEEEEcC---CCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCc
Q 002736 565 LNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 565 ~~h~~~V~sl~f~~---d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~ 641 (886)
.+|..+|-.++|+| +|-+|++++.|++=.+=+-++. .+.-...+|.+.|+..+.+. +....||++.|-+
T Consensus 11 ~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tg-------dwigtfeghkgavw~~~l~~-na~~aasaaadft 82 (334)
T KOG0278|consen 11 HGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTG-------DWIGTFEGHKGAVWSATLNK-NATRAASAAADFT 82 (334)
T ss_pred cCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCC-------CcEEeeeccCcceeeeecCc-hhhhhhhhcccch
Confidence 57999999999996 8889999999987665443332 23345668999999999987 5778899999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeee-ecCCCeEEEEEeCC
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTI-KTKANVCCVQFPLD 720 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~ 720 (886)
.+|||.-++..+..|. |..-|.+++|+. +.+.|++|+.+.-++|+|++.+. .+...+ .+...|..+-|...
T Consensus 83 akvw~a~tgdelhsf~-hkhivk~~af~~-ds~~lltgg~ekllrvfdln~p~------App~E~~ghtg~Ir~v~wc~e 154 (334)
T KOG0278|consen 83 AKVWDAVTGDELHSFE-HKHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPK------APPKEISGHTGGIRTVLWCHE 154 (334)
T ss_pred hhhhhhhhhhhhhhhh-hhheeeeEEecc-cchhhhccchHHHhhhhhccCCC------CCchhhcCCCCcceeEEEecc
Confidence 9999999999988884 888999999996 99999999999999999999853 222333 35678999999887
Q ss_pred CCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC
Q 002736 721 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 799 (886)
Q Consensus 721 ~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h 799 (886)
.+.|++.+.|++|++||.|++.. +.++. .+.+|+++..+ +|.+|.+ ..-+.|++||..+. .+++.+.-.
T Consensus 155 -D~~iLSSadd~tVRLWD~rTgt~-v~sL~-~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf------~~lKs~k~P 224 (334)
T KOG0278|consen 155 -DKCILSSADDKTVRLWDHRTGTE-VQSLE-FNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSF------GLLKSYKMP 224 (334)
T ss_pred -CceEEeeccCCceEEEEeccCcE-EEEEe-cCCCCcceeeccCCCEEEE-ecCceeEEeccccc------cceeeccCc
Confidence 67788889999999999999985 66665 45679999998 6655554 45689999999886 446666543
Q ss_pred CCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCC
Q 002736 800 TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGN 879 (886)
Q Consensus 800 ~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~ 879 (886)
..|.+..++|+..++++|++|..++.||..+++.+-.+ ..+|-++|.||.|+|+|- ..++|+.||+
T Consensus 225 -~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~------------nkgh~gpVhcVrFSPdGE-~yAsGSEDGT 290 (334)
T KOG0278|consen 225 -CNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSY------------NKGHFGPVHCVRFSPDGE-LYASGSEDGT 290 (334)
T ss_pred -cccccccccCCCceEEecCcceEEEEEeccCCceeeec------------ccCCCCceEEEEECCCCc-eeeccCCCce
Confidence 34788899999999999999999999999999877553 245678899999999999 9999999999
Q ss_pred EEEEEe
Q 002736 880 IKILEM 885 (886)
Q Consensus 880 I~iw~l 885 (886)
|++|.+
T Consensus 291 irlWQt 296 (334)
T KOG0278|consen 291 IRLWQT 296 (334)
T ss_pred EEEEEe
Confidence 999986
No 220
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.95 E-value=1.1e-27 Score=258.66 Aligned_cols=203 Identities=16% Similarity=0.202 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+.+.+|++++..++ .+. ..+.++++||| .|++|.+++.. ....+++..++.++.||+.||.|||++||+||||
T Consensus 53 il~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~di 128 (285)
T cd05630 53 ILEKVNSRFVVSLAY-AYE---TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDL 128 (285)
T ss_pred HHHhCCCCCeeeeeE-EEe---cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence 455567888877665 333 24578899998 78999998843 2346899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++..+.++++|||++.......
T Consensus 129 kp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------------------------------------------- 156 (285)
T cd05630 129 KPENILLDDHGHIRISDLGLAVHVPEGQ---------------------------------------------------- 156 (285)
T ss_pred CHHHEEECCCCCEEEeeccceeecCCCc----------------------------------------------------
Confidence 9999999999999999999884321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....+|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 197 (285)
T cd05630 157 ---------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 197 (285)
T ss_pred ---------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhC
Confidence 0001267899999999999889999999999999999999
Q ss_pred --CCCCCchhh--HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCC
Q 002736 268 --PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (886)
Q Consensus 268 --pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~ 328 (886)
||....... ...................+.+.+|+.+||+.||.+||| +.|+++||||...
T Consensus 198 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 198 QSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred CCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 775433211 111111111111222345577889999999999999999 8999999999864
No 221
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=4.2e-28 Score=264.94 Aligned_cols=206 Identities=20% Similarity=0.204 Sum_probs=168.4
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
++...+...+|+|++++|. +.+ ....+|+|||| .|+.|+++|.++ +.+.+.+++.+|.|++.||+|||+++|||
T Consensus 104 rev~imk~l~HPnIvkl~~-v~~---t~~~lylV~eya~~ge~~~yl~~~-gr~~e~~ar~~F~q~vsaveYcH~k~ivH 178 (596)
T KOG0586|consen 104 REVDIMKSLNHPNIVKLFS-VIE---TEATLYLVMEYASGGELFDYLVKH-GRMKEKEARAKFRQIVSAVEYCHSKNIVH 178 (596)
T ss_pred HHHHHHHhcCCcceeeeee-eee---ecceeEEEEEeccCchhHHHHHhc-ccchhhhhhhhhHHHHHHHHHHhhcceec
Confidence 4455556678999999888 443 34678999999 999999999777 45567999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
||||.+||||+.+.++||+|||++..+....
T Consensus 179 rdLk~eNilL~~~mnikIaDfgfS~~~~~~~------------------------------------------------- 209 (596)
T KOG0586|consen 179 RDLKAENILLDENMNIKIADFGFSTFFDYGL------------------------------------------------- 209 (596)
T ss_pred cccchhhcccccccceeeeccccceeecccc-------------------------------------------------
Confidence 9999999999999999999999986543221
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCC-CcccccchHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDIwSlGvil~e 264 (886)
...+.+|++.|.|||++.+..| ++.+|+||||++||-
T Consensus 210 ------------------------------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~ 247 (596)
T KOG0586|consen 210 ------------------------------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA 247 (596)
T ss_pred ------------------------------------------cccccCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence 1122499999999999999886 779999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
|++ ||....-....-..++....-+.. .+.++.++|.++|.++|.+|+++++++.|.|......
T Consensus 248 LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~ 314 (596)
T KOG0586|consen 248 LVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLE 314 (596)
T ss_pred eeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhh
Confidence 999 997766554444444444444443 3467889999999999999999999999999886543
No 222
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=1.3e-27 Score=255.65 Aligned_cols=192 Identities=21% Similarity=0.280 Sum_probs=151.2
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++..++ .+. ..+.++++||| .|++|.+++.+. ..+++.+++.++.||+.||.|||+.||+||||||+||+
T Consensus 67 ~h~~iv~~~~-~~~---~~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 67 DNPNFIKLYY-SVT---TLKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred cCCCEEEEEE-EEe---cCCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 6888877776 332 23578999999 789999999665 47899999999999999999999999999999999999
Q ss_pred eccCC-ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 115 MSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 115 l~~~~-~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
++.++ .++++|||++...+..
T Consensus 142 ~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 163 (267)
T PHA03390 142 YDRAKDRIYLCDYGLCKIIGTP---------------------------------------------------------- 163 (267)
T ss_pred EeCCCCeEEEecCccceecCCC----------------------------------------------------------
Confidence 99888 9999999987433111
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
....|+..|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 164 ------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 164 ------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 00146788999999998889999999999999999999 775
Q ss_pred CCchhhHHhHhhcc--CCCChhhhccChhhHHHHHHccCCCCCCCCC-HHHHhcCCCCC
Q 002736 271 TGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLN 326 (886)
Q Consensus 271 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-~~eil~h~~~~ 326 (886)
...........+.. ....+.+...++.+.+||.+||+++|.+||+ ++++|+||||.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 208 EDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred CCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 43322211111111 1122333356788899999999999999996 69999999996
No 223
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95 E-value=2.6e-27 Score=255.51 Aligned_cols=204 Identities=14% Similarity=0.151 Sum_probs=155.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+.. ...++++||| .+++|..++.+....+++..++.++.||+.||.|||+.||+|||||
T Consensus 55 ~l~~l~h~~ii~~~~-~~~~---~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlk 130 (282)
T cd06643 55 ILASCDHPNIVKLLD-AFYY---ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLK 130 (282)
T ss_pred HHHHCCCCCeeeEEE-EEee---CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 445567888888766 3432 3568899999 7889988886555678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++........
T Consensus 131 p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 158 (282)
T cd06643 131 AGNILFTLDGDIKLADFGVSAKNTRTIQ---------------------------------------------------- 158 (282)
T ss_pred cccEEEccCCCEEEcccccccccccccc----------------------------------------------------
Confidence 9999999999999999999853311100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvil~e 264 (886)
......+++.|+|||.+. +..++.++|||||||++||
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~e 200 (282)
T cd06643 159 --------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 200 (282)
T ss_pred --------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHH
Confidence 001125788999999984 3457889999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCC-CChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|++ ||................. ..+.....+..+.+|+.+||+++|.+||++.++++||||...
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 201 MAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred HccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 998 6654443333333222211 112223345678899999999999999999999999999864
No 224
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=1.3e-27 Score=257.36 Aligned_cols=199 Identities=18% Similarity=0.191 Sum_probs=150.6
Q ss_pred ccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcc
Q 002736 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (886)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~N 112 (886)
..+|++++..+. .+. ..+.++++||| .|++|.+++... ..+++..+..|+.||+.||.|||++||+||||||+|
T Consensus 53 ~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~N 127 (279)
T cd05633 53 TGDCPFIVCMTY-AFH---TPDKLCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPAN 127 (279)
T ss_pred hCCCCcEeEEEE-EEe---cCCeEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHH
Confidence 356777766554 222 24578889998 889999998654 568999999999999999999999999999999999
Q ss_pred eeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCc
Q 002736 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (886)
Q Consensus 113 Ill~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (886)
||++.++.++++|||++.......
T Consensus 128 il~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------------- 151 (279)
T cd05633 128 ILLDEHGHVRISDLGLACDFSKKK-------------------------------------------------------- 151 (279)
T ss_pred EEECCCCCEEEccCCcceeccccC--------------------------------------------------------
Confidence 999999999999999884331100
Q ss_pred cCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc---C
Q 002736 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---P 268 (886)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~---p 268 (886)
.....|+..|+|||.+.+ ..++.++|||||||++|||++ |
T Consensus 152 ------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 195 (279)
T cd05633 152 ------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195 (279)
T ss_pred ------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 001257889999999864 558999999999999999999 7
Q ss_pred CCCCchhh-HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 269 FSTGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 269 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
|....... ...........+..+...++++.+++.+||..||.+|| ++.++++||||....
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 196 FRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred cCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 75432211 11111111111222234567888999999999999999 699999999998854
No 225
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.1e-25 Score=246.58 Aligned_cols=267 Identities=20% Similarity=0.270 Sum_probs=221.3
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecC
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~ 616 (886)
++-.....+.+|+..++++...... +.+.|+++.|+++|.+||+|..+|.+.|||....... +.....|
T Consensus 191 laValg~~vylW~~~s~~v~~l~~~-----~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~------~~~~~~h 259 (484)
T KOG0305|consen 191 LAVALGQSVYLWSASSGSVTELCSF-----GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT------RTLRGSH 259 (484)
T ss_pred EEEEecceEEEEecCCCceEEeEec-----CCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc------ccccCCc
Confidence 4444555789999999886544321 2889999999999999999999999999998763211 1122238
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEE-ecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhh
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~ 695 (886)
...|.+++|+ ...+.+|+.||.|..+|++..+.... +.+|...|..+.|++ ++.+||+|+.|+.+.|||....
T Consensus 260 ~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~-- 333 (484)
T KOG0305|consen 260 ASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSP-- 333 (484)
T ss_pred CceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC-CCCeeccCCCccceEeccCCCc--
Confidence 8899999998 67899999999999999998876555 889999999999998 9999999999999999999652
Q ss_pred hhccCceeeeeecCCCeEEEEEeCCCCcEEEEEe--CCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEE--
Q 002736 696 LLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGS--ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSA-- 770 (886)
Q Consensus 696 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs--~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sg-- 770 (886)
........|.+.|..++|+|....+||+|+ .|++|++||..++.. +.... -...|..|.|+ ..+.|+++
T Consensus 334 ----~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~-i~~vd-tgsQVcsL~Wsk~~kEi~sthG 407 (484)
T KOG0305|consen 334 ----EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR-IDSVD-TGSQVCSLIWSKKYKELLSTHG 407 (484)
T ss_pred ----cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE-ecccc-cCCceeeEEEcCCCCEEEEecC
Confidence 344455567899999999999889999964 699999999998874 44433 34679999998 55566653
Q ss_pred ECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCC
Q 002736 771 STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 832 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~ 832 (886)
..++.|.||+..+. .++..+.||+..|..+++||||..|++|+.|.++++|++-..
T Consensus 408 ~s~n~i~lw~~ps~------~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 408 YSENQITLWKYPSM------KLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCCCcEEEEecccc------ceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 35789999999986 568999999999999999999999999999999999998775
No 226
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=1.5e-27 Score=257.71 Aligned_cols=201 Identities=17% Similarity=0.204 Sum_probs=151.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCC--CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++.+++ ++. ..+.++++|||..++|.+++... +..+++..++.++.||+.||.|||++||+||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl 127 (285)
T cd07861 52 LLKELQHPNIVCLQD-VLM---QESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDL 127 (285)
T ss_pred HHHhcCCCCEeeeEE-EEe---eCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence 344456888888777 443 34678999999778999988543 256899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++...+....
T Consensus 128 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 156 (285)
T cd07861 128 KPQNLLIDNKGVIKLADFGLARAFGIPVR--------------------------------------------------- 156 (285)
T ss_pred CHHHEEEcCCCcEEECcccceeecCCCcc---------------------------------------------------
Confidence 99999999999999999999853321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~ 267 (886)
......++++|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 157 ---------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred ---------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH
Confidence 00012568889999998764 47899999999999999999
Q ss_pred ---CCCCCchhhHHhHhhcc---------------------------CCCChhhhccChhhHHHHHHccCCCCCCCCCHH
Q 002736 268 ---PFSTGEEKTRTMSSLRH---------------------------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
||............+.. ..........++++.++|.+||..||.+|||+.
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ 277 (285)
T cd07861 198 KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK 277 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 66544332222111110 000011223456778999999999999999999
Q ss_pred HHhcCCCC
Q 002736 318 ELLQSEFL 325 (886)
Q Consensus 318 eil~h~~~ 325 (886)
+++.||||
T Consensus 278 ~ll~~~~~ 285 (285)
T cd07861 278 KALNHPYF 285 (285)
T ss_pred HHhcCCCC
Confidence 99999997
No 227
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95 E-value=5.3e-27 Score=254.47 Aligned_cols=207 Identities=16% Similarity=0.192 Sum_probs=156.0
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+. ....++++||| .|++|..++.+....+++..++.++.||+.+|.|||++||+|||||
T Consensus 62 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk 137 (292)
T cd06644 62 ILATCNHPYIVKLLG-AFY---WDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLK 137 (292)
T ss_pred HHHhCCCCcEeeeEE-EEE---eCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCC
Confidence 345667888888666 333 23578899999 7888988886655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++|+|||++........
T Consensus 138 p~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 165 (292)
T cd06644 138 AGNVLLTLDGDIKLADFGVSAKNVKTLQ---------------------------------------------------- 165 (292)
T ss_pred cceEEEcCCCCEEEccCccceecccccc----------------------------------------------------
Confidence 9999999999999999998743211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvil~e 264 (886)
......+++.|+|||.+. ...++.++|||||||++||
T Consensus 166 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~e 207 (292)
T cd06644 166 --------------------------------------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 207 (292)
T ss_pred --------------------------------------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHH
Confidence 011235788899999985 3447889999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCC--hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCch
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~ 332 (886)
|++ ||....... ....+.....+ ........++.+++.+||..+|.+||++.++++||||.......
T Consensus 208 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 279 (292)
T cd06644 208 MAQIEPPHHELNPMR-VLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR 279 (292)
T ss_pred HhcCCCCCccccHHH-HHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccch
Confidence 999 664433322 22222222111 12233456788999999999999999999999999998754433
No 228
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=3.2e-27 Score=254.58 Aligned_cols=195 Identities=18% Similarity=0.278 Sum_probs=147.3
Q ss_pred ccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll 115 (886)
+|++++..++ ++.+. ..+.++++|||.+++|.+++......+++.+++.++.||+.||.|||+.||+||||||+||++
T Consensus 56 ~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l 133 (282)
T cd07831 56 PHPNILRLIE-VLFDR-KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI 133 (282)
T ss_pred CCCCccceEE-EEecC-CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence 4788877666 55432 336789999997789999986655678999999999999999999999999999999999999
Q ss_pred ccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCc
Q 002736 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (886)
Q Consensus 116 ~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (886)
+. +.+|++|||++........
T Consensus 134 ~~-~~~kl~dfg~~~~~~~~~~---------------------------------------------------------- 154 (282)
T cd07831 134 KD-DILKLADFGSCRGIYSKPP---------------------------------------------------------- 154 (282)
T ss_pred cC-CCeEEEecccccccccCCC----------------------------------------------------------
Confidence 99 9999999999854321100
Q ss_pred ccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc---CCCC
Q 002736 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
.....++.+|+|||.+.. ..++.++|||||||++|||++ ||..
T Consensus 155 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 155 ---------------------------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred ---------------------------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 001256889999998755 447899999999999999998 5644
Q ss_pred CchhhHHhHhhcc---C-----------------CCC--------hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCC
Q 002736 272 GEEKTRTMSSLRH---R-----------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 323 (886)
Q Consensus 272 ~~~~~~~~~~~~~---~-----------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~ 323 (886)
....... ..+.. . ..+ +.....+..+.++|.+||.++|.+||++.++++||
T Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~ 280 (282)
T cd07831 202 TNELDQI-AKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP 280 (282)
T ss_pred CCHHHHH-HHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence 3322111 11100 0 000 01123456788999999999999999999999999
Q ss_pred CC
Q 002736 324 FL 325 (886)
Q Consensus 324 ~~ 325 (886)
||
T Consensus 281 ~~ 282 (282)
T cd07831 281 YF 282 (282)
T ss_pred CC
Confidence 97
No 229
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=1.9e-27 Score=254.37 Aligned_cols=200 Identities=18% Similarity=0.245 Sum_probs=152.2
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .+++|.+++... +.+++.+++.++.||+.||.|||++||+|+||
T Consensus 58 ~~~~~l~h~~ii~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 132 (267)
T cd06645 58 IMMKDCKHSNIVAYFG-SYL---RRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDI 132 (267)
T ss_pred HHHHhCCCCCeeeEEE-EEE---eCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 3444567888888777 332 34678899999 678999998654 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++..+.++++|||++........
T Consensus 133 kp~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 161 (267)
T cd06645 133 KGANILLTDNGHVKLADFGVSAQITATIA--------------------------------------------------- 161 (267)
T ss_pred CHHHEEECCCCCEEECcceeeeEccCccc---------------------------------------------------
Confidence 99999999999999999999853321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcccccchHHHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDIwSlGvil~eL 265 (886)
......|+..|+|||.+. ...++.++|||||||++|||
T Consensus 162 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l 202 (267)
T cd06645 162 ---------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL 202 (267)
T ss_pred ---------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHH
Confidence 001126788999999974 44588999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCChhh---hccChhhHHHHHHccCCCCCCCCCHHHHhcCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 324 (886)
++ ||..................++.. ...+..+.+++.+||..+|++||+++++++|||
T Consensus 203 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 203 AELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99 665544333222222222222222 123456789999999999999999999999998
No 230
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=9.5e-28 Score=278.46 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=151.8
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCC----CCCcChHHHHHHHHHHHHHHHhhcccCe
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (886)
+...+.+.+|+|++.+++ ++.+ .+..|++||+.+++|.+++... .......+++.|+.||+.||.|||++||
T Consensus 213 Ei~il~~l~HpnIv~l~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI 288 (501)
T PHA03210 213 EILALGRLNHENILKIEE-ILRS---EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL 288 (501)
T ss_pred HHHHHHhCCCCCcCcEeE-EEEE---CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence 344566778999998777 5543 4567888999888999887432 1223467788999999999999999999
Q ss_pred eecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccc
Q 002736 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (886)
Q Consensus 104 iHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 183 (886)
|||||||+||||+.++.+||+|||+++.+......
T Consensus 289 iHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------------------- 323 (501)
T PHA03210 289 IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA--------------------------------------------- 323 (501)
T ss_pred ecCCCCHHHEEECCCCCEEEEeCCCceecCccccc---------------------------------------------
Confidence 99999999999999999999999998644221000
Q ss_pred ccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHH
Q 002736 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (886)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~ 263 (886)
.....+||..|+|||++.+..++.++|||||||+||
T Consensus 324 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 324 --------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred --------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 011137899999999999988999999999999999
Q ss_pred HHhc----CCCCCc--hhhHHhHhhcc-----CCCC-----------------------hhh--hccChhhHHHHHHccC
Q 002736 264 ELFC----PFSTGE--EKTRTMSSLRH-----RVLP-----------------------PQL--LLKFPKEASFCLWLLH 307 (886)
Q Consensus 264 eLl~----pf~~~~--~~~~~~~~~~~-----~~~~-----------------------~~~--~~~~~~~~~li~~~L~ 307 (886)
||++ |+.... ........+.. ..++ +.. .....++.++|.+||.
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 9998 332221 11111111110 0000 000 1123456688999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCC
Q 002736 308 PEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 308 ~dP~~Rps~~eil~h~~~~~~ 328 (886)
+||.+|||+.|+|.||||...
T Consensus 440 ~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 440 FDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred cCcccCcCHHHHhhChhhhcC
Confidence 999999999999999999764
No 231
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=5e-25 Score=251.41 Aligned_cols=254 Identities=14% Similarity=0.186 Sum_probs=190.7
Q ss_pred cccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCcccCcccccccce-EEecC
Q 002736 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMAS 616 (886)
Q Consensus 539 ~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d-~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~-~~~~~ 616 (886)
|..++.+++|+..+......+ .+|.+.|.+++|+|+ +.+||||+.|++|+||++............+. ...+|
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L-----~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKL-----KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCceeEEEeeecCCCceEEEE-----cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC
Confidence 566888999998776555554 679999999999996 78999999999999999975321111111122 23468
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhh
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~ 696 (886)
...|.+|+|+|....+|+|++.||+|+|||+++++.+..+. |...|.+++|+| ++.+|++++.|+.|+|||+++
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rs---- 198 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRK---- 198 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECC-CCCEEEEEecCCEEEEEECCC----
Confidence 89999999999655567899999999999999998877775 668899999998 899999999999999999998
Q ss_pred hccCceeeeeecC-CC-----eEEEEEeCCCCcEEEEEeCCC----eEEEEecCCCCcceEEEecCC--CCeEEEEec-C
Q 002736 697 LHLGVSIGTIKTK-AN-----VCCVQFPLDSGRSLAFGSADH----RIYYYDLRNSKIPLCTLIGHN--KTVSYVKFV-D 763 (886)
Q Consensus 697 ~~~~~~~~~~~~~-~~-----v~~v~~sp~~~~~l~~gs~Dg----~I~vwDlr~~~~~~~~~~~h~--~~V~~v~f~-~ 763 (886)
+..+..+..+ +. +....|+++ +.+|++++.|+ .|++||+++...++..+..+. ..+.....+ +
T Consensus 199 ---g~~i~tl~gH~g~~~s~~v~~~~fs~d-~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~t 274 (568)
T PTZ00420 199 ---QEIASSFHIHDGGKNTKNIWIDGLGGD-DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDEST 274 (568)
T ss_pred ---CcEEEEEecccCCceeEEEEeeeEcCC-CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCC
Confidence 5555555543 22 233445677 67888877664 799999998666777664433 222223333 6
Q ss_pred CCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCC
Q 002736 764 ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD 812 (886)
Q Consensus 764 ~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g 812 (886)
+.++++|+.|++|++|++..... ..+..+. +..+..+++|.|..
T Consensus 275 g~l~lsGkGD~tIr~~e~~~~~~----~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 275 GLIYLIGKGDGNCRYYQHSLGSI----RKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred CCEEEEEECCCeEEEEEccCCcE----Eeecccc-cCCCccceEEcccc
Confidence 88999999999999999986532 2233333 56778899999974
No 232
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94 E-value=1.6e-27 Score=254.66 Aligned_cols=207 Identities=16% Similarity=0.174 Sum_probs=158.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+.+.+|++++..++ +|.+ .+.++++||| .|++|.+++.+. ..+++..+..++.||+.||.|||+.||+|+||
T Consensus 54 ~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 128 (265)
T cd06631 54 DLLKSLKHVNIVQYLG-TCLD---DNTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDI 128 (265)
T ss_pred HHHHhcCCCCEeeEee-Eeec---CCeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 3455667888887666 5543 3778999999 789999999654 46899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++............
T Consensus 129 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----------------------------------------------- 161 (265)
T cd06631 129 KGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH----------------------------------------------- 161 (265)
T ss_pred CHHhEEECCCCeEEeccchhhHhhhhccccccc-----------------------------------------------
Confidence 999999999999999999988543211000000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
........|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 -------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g 204 (265)
T cd06631 162 -------------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATG 204 (265)
T ss_pred -------------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhC
Confidence 000011257889999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhcc-CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||............... ...++........+.+++.+||..+|.+||++.++++||||
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 205 KPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 77554433333222222 23333444456778899999999999999999999999997
No 233
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.94 E-value=2.8e-27 Score=255.16 Aligned_cols=199 Identities=16% Similarity=0.176 Sum_probs=148.7
Q ss_pred ccccCCCCCCcccccc---ccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 36 DHLRNQGGLSGVCENE---AAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~---~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+|++++..++ .+... ...+.++++||| .+++|.+++... ...+++..++.++.||+.||.|||++||+|+||||
T Consensus 71 ~h~~i~~~~~-~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~ 149 (282)
T cd06636 71 HHRNIATYYG-AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKG 149 (282)
T ss_pred CCCcEEEEee-ehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 6788877666 33221 234678999999 677999988543 34578999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++........
T Consensus 150 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 176 (282)
T cd06636 150 QNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------------------- 176 (282)
T ss_pred HHEEECCCCCEEEeeCcchhhhhcccc-----------------------------------------------------
Confidence 999999999999999998853311000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHHHHHH
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvil~eL 265 (886)
......|++.|+|||.+. +..++.++|||||||++|||
T Consensus 177 -------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el 219 (282)
T cd06636 177 -------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219 (282)
T ss_pred -------------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHH
Confidence 001126788999999986 34588899999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
++ ||.........................++.+.+||.+||..||.+||++.|+++||||
T Consensus 220 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 220 AEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99 7754433222221111111111222355778899999999999999999999999997
No 234
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94 E-value=2.1e-27 Score=253.98 Aligned_cols=207 Identities=16% Similarity=0.194 Sum_probs=159.5
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+....|++++..++ .+. ..+.++++||| .+++|.+++... ..+++..+..++.||+.||+|||++||+|||
T Consensus 57 ~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d 131 (267)
T cd06628 57 IALLKELQHENIVQYLG-SSL---DADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRD 131 (267)
T ss_pred HHHHHhcCCCCeeeEEE-EEE---eCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 34455667888888766 333 34677888999 788999999654 5789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||.++...........
T Consensus 132 i~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~---------------------------------------------- 165 (267)
T cd06628 132 IKGANILVDNKGGIKISDFGISKKLEANSLSTKT---------------------------------------------- 165 (267)
T ss_pred CCHHHEEEcCCCCEEecccCCCcccccccccCCc----------------------------------------------
Confidence 9999999999999999999998654321100000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
........|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 --------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~ 207 (267)
T cd06628 166 --------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT 207 (267)
T ss_pred --------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhh
Confidence 000111357888999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||........ +..+.....+.........+.+++.+||+++|.+||++.++++||||
T Consensus 208 g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 208 GKHPFPDCTQLQA-IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCCCCCCccHHHH-HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 7765443332 23333333344444556778899999999999999999999999997
No 235
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94 E-value=1.8e-27 Score=254.44 Aligned_cols=206 Identities=18% Similarity=0.172 Sum_probs=153.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+....|++++..++ ++.+ .....++++||| .+++|.+++.+. ..+++..++.++.||+.||.|||++||+||||
T Consensus 56 ~~l~~l~h~~i~~~~~-~~~~-~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l 132 (266)
T cd06651 56 QLLKNLQHERIVQYYG-CLRD-RAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNMIVHRDI 132 (266)
T ss_pred HHHHHcCCCCeeeEEE-EEEc-CCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence 3555667888888766 3332 234567889998 788999999654 46899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++..........
T Consensus 133 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------------------------- 163 (266)
T cd06651 133 KGANILRDSAGNVKLGDFGASKRLQTICMSG------------------------------------------------- 163 (266)
T ss_pred CHHHEEECCCCCEEEccCCCccccccccccC-------------------------------------------------
Confidence 9999999999999999999985431110000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g 205 (266)
T cd06651 164 --------------------------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTE 205 (266)
T ss_pred --------------------------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHC
Confidence 00011256888999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
||..................+.......+.+.+++ .||..+|.+||+++|+++||||+
T Consensus 206 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 206 KPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 77544333333322222222222333456667787 67778999999999999999986
No 236
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94 E-value=2.1e-27 Score=256.61 Aligned_cols=203 Identities=20% Similarity=0.267 Sum_probs=152.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++++..++ ++.+ ...++++|||.|++|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p 127 (286)
T cd07832 52 ALQACQHPYVVKLLD-VFPH---GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKP 127 (286)
T ss_pred HHHhCCCCCCcceee-EEec---CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCH
Confidence 344456888888776 3332 567899999999999999966557799999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++..+.++++|||++........
T Consensus 128 ~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 154 (286)
T cd07832 128 ANLLISADGVLKIADFGLARLFSEEEP----------------------------------------------------- 154 (286)
T ss_pred HHEEEcCCCcEEEeeeeecccccCCCC-----------------------------------------------------
Confidence 999999999999999999854422100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~-- 267 (886)
.......|+.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 155 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 198 (286)
T cd07832 155 ------------------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS 198 (286)
T ss_pred ------------------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCC
Confidence 0001126789999999987644 7899999999999999999
Q ss_pred CCCCCchhhHHhHhhccC---------------------CC--------ChhhhccChhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 PFSTGEEKTRTMSSLRHR---------------------VL--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~---------------------~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e 318 (886)
|++...........+... .. ..........+.+|+.+||.++|.+||++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 278 (286)
T cd07832 199 PLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278 (286)
T ss_pred cCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence 443333222211111100 00 0111233466779999999999999999999
Q ss_pred HhcCCCCC
Q 002736 319 LLQSEFLN 326 (886)
Q Consensus 319 il~h~~~~ 326 (886)
+++||||.
T Consensus 279 ~l~h~~~~ 286 (286)
T cd07832 279 ALRHPYFT 286 (286)
T ss_pred HhhCcCcC
Confidence 99999984
No 237
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.94 E-value=1.8e-27 Score=262.47 Aligned_cols=211 Identities=17% Similarity=0.132 Sum_probs=151.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++.+++ ++.. .+.++++||| .+++|.+++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 52 ~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dl 127 (327)
T cd08227 52 VSKLFNHPNIVPYRA-TFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSV 127 (327)
T ss_pred HHHhcCCCCeeeEEE-EEEE---CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence 334458899988776 5543 4568899999 789999999543 345899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.++++||+.+......... ...
T Consensus 128 kp~Nil~~~~~~~~l~~~~~~~~~~~~~~~------------------------------------~~~----------- 160 (327)
T cd08227 128 KASHILISVDGKVYLSGLRSNLSMINHGQR------------------------------------LRV----------- 160 (327)
T ss_pred ChhhEEEecCCcEEEcccchhhcccccccc------------------------------------ccc-----------
Confidence 999999999999999999865322100000 000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC--CCCCcccccchHHHHHHHHh
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDIwSlGvil~eLl 266 (886)
. .. ......++..|+|||++.+ ..++.++|||||||++|||+
T Consensus 161 -------------------~--------------~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~ 204 (327)
T cd08227 161 -------------------V--------------HD---FPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA 204 (327)
T ss_pred -------------------c--------------cc---ccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHH
Confidence 0 00 0001146778999999976 35899999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCC--------------------------------------------ChhhhccChhhH
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVL--------------------------------------------PPQLLLKFPKEA 299 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~ 299 (886)
+ ||............+..... .+......+.+.
T Consensus 205 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
T cd08227 205 NGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFH 284 (327)
T ss_pred HCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHH
Confidence 9 77543332222222111000 001112345678
Q ss_pred HHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 300 ~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
+|+.+||+.||.+|||++|+++||||+..
T Consensus 285 ~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 285 HFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 99999999999999999999999999753
No 238
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.4e-27 Score=232.08 Aligned_cols=192 Identities=15% Similarity=0.244 Sum_probs=152.3
Q ss_pred ceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCC
Q 002736 56 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 135 (886)
Q Consensus 56 ~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~ 135 (886)
.||+|+.++..+|.-+|.....+++..+++.++++++.||.|+|...|+|||+||+|+||+.+|.+|++|||+++.+...
T Consensus 98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~ 177 (376)
T KOG0669|consen 98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTS 177 (376)
T ss_pred eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecc
Confidence 38999999999999999777678999999999999999999999999999999999999999999999999999655322
Q ss_pred ccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccccccccccccc
Q 002736 136 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 215 (886)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 215 (886)
.-.
T Consensus 178 ~n~----------------------------------------------------------------------------- 180 (376)
T KOG0669|consen 178 KNV----------------------------------------------------------------------------- 180 (376)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc--CCCCCchhhHHhHhh---ccCCCCh
Q 002736 216 EQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL---RHRVLPP 289 (886)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~--pf~~~~~~~~~~~~~---~~~~~~~ 289 (886)
.+...+..+-|.||++||.+.|.. |+++.|||..|||+.||++ |.+.++........+ .....+.
T Consensus 181 ---------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 181 ---------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred ---------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 000233347799999999999965 9999999999999999999 776666554443322 2221111
Q ss_pred hhh-------------------------------ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCchH
Q 002736 290 QLL-------------------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (886)
Q Consensus 290 ~~~-------------------------------~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~~ 333 (886)
.|+ ...+++.+|+.++|..||.+|+.++++|.|.||...+.+..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqa 326 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQA 326 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchh
Confidence 110 11235679999999999999999999999999998766543
No 239
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94 E-value=4.7e-27 Score=257.91 Aligned_cols=235 Identities=16% Similarity=0.183 Sum_probs=163.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+.+.+|++++..++ .+. ..+.++++||| .|++|.+++.+. ...+++..++.++.||+.||.|||+.||+|+|
T Consensus 53 ~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 128 (316)
T cd05574 53 EILATLDHPFLPTLYA-SFQ---TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRD 128 (316)
T ss_pred HHHHhCCCCCchhhee-eee---cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 4455567888888766 333 34678899998 788999999653 35789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||++........... ... ...... .+...
T Consensus 129 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~~~-----------------------~~~~~~-------~~~~~ 175 (316)
T cd05574 129 LKPENILLHESGHIMLSDFDLSKQSDVEPPPVS---KAL-----------------------RKGSRR-------SSVNS 175 (316)
T ss_pred CChHHeEEcCCCCEEEeecchhhcccccccccc---ccc-----------------------cccccc-------ccccc
Confidence 999999999999999999999865432210000 000 000000 00000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
..... ............+|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 176 -----~~~~~-----------------------~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~ 227 (316)
T cd05574 176 -----IPSET-----------------------FSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLY 227 (316)
T ss_pred -----cchhh-----------------------hcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhh
Confidence 00000 00000001122478999999999998889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC----HHHHhcCCCCCCCc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPR 329 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h~~~~~~~ 329 (886)
||...................+.....++.+.+++.+||..+|.+||+ ++|+|+||||....
T Consensus 228 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 228 GTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred CCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 775554443333333323222222235677889999999999999999 99999999998754
No 240
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=249.41 Aligned_cols=185 Identities=18% Similarity=0.224 Sum_probs=147.6
Q ss_pred cCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccC
Q 002736 53 AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 130 (886)
Q Consensus 53 ~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~ 130 (886)
..+.+|++|.. +||+|.-.|... +..+++..++.|+.+|+.||++||.++||.|||||+||||+..|+|+|.|+|+|.
T Consensus 256 Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 256 TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAV 335 (591)
T ss_pred CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEE
Confidence 46788889888 999999988554 3578999999999999999999999999999999999999999999999999995
Q ss_pred CCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccc
Q 002736 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (886)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (886)
++....
T Consensus 336 ei~~g~-------------------------------------------------------------------------- 341 (591)
T KOG0986|consen 336 EIPEGK-------------------------------------------------------------------------- 341 (591)
T ss_pred ecCCCC--------------------------------------------------------------------------
Confidence 542110
Q ss_pred cccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHH---hHhhcc
Q 002736 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRT---MSSLRH 284 (886)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~---~~~~~~ 284 (886)
.....+||..|||||++.+..|+++.|+|||||+||||+. ||....+.... -..+..
T Consensus 342 -----------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~ 404 (591)
T KOG0986|consen 342 -----------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE 404 (591)
T ss_pred -----------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc
Confidence 0112389999999999999999999999999999999998 88654433221 111111
Q ss_pred CCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCCc
Q 002736 285 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (886)
Q Consensus 285 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~ 329 (886)
. ........++++++|+..+|.+||.+|.. ++++.+||||+...
T Consensus 405 ~-~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln 453 (591)
T KOG0986|consen 405 D-PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN 453 (591)
T ss_pred c-hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence 1 11112345678889999999999999965 67999999998754
No 241
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.5e-25 Score=256.66 Aligned_cols=290 Identities=19% Similarity=0.323 Sum_probs=235.7
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEEcCcccCcccc----cccceEEe-cCCCCeeeEEEeCCCCCeEEEecC
Q 002736 566 NSSNLVCSLSFDRDGELFAAAG--VNKKIKVFECDAIINENRD----IHYPVVEM-ASRSKLSSICWNSYIKSQIASSNF 638 (886)
Q Consensus 566 ~h~~~V~sl~f~~d~~~lat~~--~d~~Ikiwd~~~~~~~~~~----~~~~~~~~-~~~~~I~~l~~~~~~~~~las~s~ 638 (886)
++...|.+|+.+|||..+|||| .|+.++||+.+....+... .+..+..+ .|.+.|+|+.|+| ++.+||+|+.
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~-dG~~lAsGSD 89 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP-DGSYLASGSD 89 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC-CCCeEeeccC
Confidence 3466799999999999999999 9999999998765433221 22233333 5899999999999 8999999999
Q ss_pred CCcEEEEECCC------------------ceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccC
Q 002736 639 EGVVQVWDVSR------------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLG 700 (886)
Q Consensus 639 Dg~V~iWd~~t------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~ 700 (886)
|+.|.||.... .+++..+.+|...|.+++|+| ++.+||+++-|++|.|||.++ .
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~t-------F 161 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKT-------F 161 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEcccc-------c
Confidence 99999998762 135677899999999999999 999999999999999999998 4
Q ss_pred ceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCC------CCeEEEEec-CCCEEEEEEC
Q 002736 701 VSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHN------KTVSYVKFV-DATTLVSAST 772 (886)
Q Consensus 701 ~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~------~~V~~v~f~-~~~~l~sgs~ 772 (886)
..+..+. |...|..|.|+|- |++||+-+.|++|++|++.+... .+.+.++- .-...+.|+ ||++|+++..
T Consensus 162 ~~~~vl~~H~s~VKGvs~DP~-Gky~ASqsdDrtikvwrt~dw~i-~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA 239 (942)
T KOG0973|consen 162 ELLKVLRGHQSLVKGVSWDPI-GKYFASQSDDRTLKVWRTSDWGI-EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNA 239 (942)
T ss_pred eeeeeeecccccccceEECCc-cCeeeeecCCceEEEEEccccee-eEeeccchhhCCCcceeeecccCCCcCeecchhh
Confidence 5556665 4567999999999 99999999999999999877553 44444332 346788887 9999998653
Q ss_pred ----CCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecC-----CC------------EEEEEcCCCcEEEEecCC
Q 002736 773 ----DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW-----DG------------YVATGSETNEVFVYHKAF 831 (886)
Q Consensus 773 ----Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~-----g~------------~lasgs~Dg~v~iwd~~~ 831 (886)
-.++.|.+-.+.+. -..|.||..++.++.|+|. .. .+|+||.|++|.||....
T Consensus 240 ~n~~~~~~~IieR~tWk~------~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~ 313 (942)
T KOG0973|consen 240 VNGGKSTIAIIERGTWKV------DKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL 313 (942)
T ss_pred ccCCcceeEEEecCCcee------eeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC
Confidence 34788888776643 5789999999999999984 11 689999999999999999
Q ss_pred CCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 832 PMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
++|+.... + --...|.+++|+|||- .|++++.||+|.++.+
T Consensus 314 ~RPl~vi~----------~--lf~~SI~DmsWspdG~-~LfacS~DGtV~~i~F 354 (942)
T KOG0973|consen 314 PRPLFVIH----------N--LFNKSIVDMSWSPDGF-SLFACSLDGTVALIHF 354 (942)
T ss_pred CCchhhhh----------h--hhcCceeeeeEcCCCC-eEEEEecCCeEEEEEc
Confidence 88886442 1 1134599999999999 9999999999998864
No 242
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=2.5e-25 Score=230.13 Aligned_cols=282 Identities=17% Similarity=0.283 Sum_probs=236.7
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEEC
Q 002736 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (886)
Q Consensus 568 ~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~ 647 (886)
...++++...|....++|||.|+.+.+||.... .......+|..+|+.+.++| +...+++++.|..|+||.+
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~-------q~l~~~~Gh~kki~~v~~~~-~~~~v~~aSad~~i~vws~ 290 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSN-------QILATLKGHTKKITSVKFHK-DLDTVITASADEIIRVWSV 290 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchh-------hhhhhccCcceEEEEEEecc-chhheeecCCcceEEeecc
Confidence 346788888887789999999999999998752 11223457888999999999 6889999999999999999
Q ss_pred CCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecC---CCeEEEEEeCCCCcE
Q 002736 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTK---ANVCCVQFPLDSGRS 724 (886)
Q Consensus 648 ~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~---~~v~~v~~sp~~~~~ 724 (886)
...........|..+|+.+..+| ++.+|+++++||+.-..|+++ +..+....+. -.+++.+|+|| |.+
T Consensus 291 ~~~s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~-------g~~lt~vs~~~s~v~~ts~~fHpD-gLi 361 (506)
T KOG0289|consen 291 PLSSEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISS-------GSQLTVVSDETSDVEYTSAAFHPD-GLI 361 (506)
T ss_pred ccccCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccC-------CcEEEEEeeccccceeEEeeEcCC-ceE
Confidence 88888888889999999999998 999999999999999999999 6655555443 34899999999 999
Q ss_pred EEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecC-CCc
Q 002736 725 LAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH-TNV 802 (886)
Q Consensus 725 l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h-~~~ 802 (886)
|.+|..|+.|++||+.+.. .+..|.+|.++|..|+|+ +|-+|++++.|+.|++||++... ...++.-. ..+
T Consensus 362 fgtgt~d~~vkiwdlks~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~------n~kt~~l~~~~~ 434 (506)
T KOG0289|consen 362 FGTGTPDGVVKIWDLKSQT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLK------NFKTIQLDEKKE 434 (506)
T ss_pred EeccCCCceEEEEEcCCcc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhc------ccceeecccccc
Confidence 9999999999999999888 489999999999999999 99999999999999999999874 24444422 237
Q ss_pred eeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEE
Q 002736 803 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 882 (886)
Q Consensus 803 v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~i 882 (886)
++++.|.+.|.||+.++.|=.|++++..+...-. ..+..+|.+....|.|..... ++++++-|..+++
T Consensus 435 v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~-----------~~~~~~~sg~st~v~Fg~~aq-~l~s~smd~~l~~ 502 (506)
T KOG0289|consen 435 VNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTE-----------IKELADHSGLSTGVRFGEHAQ-YLASTSMDAILRL 502 (506)
T ss_pred ceeEEEcCCCCeEEeecceeEEEEEeccccccee-----------eehhhhcccccceeeecccce-EEeeccchhheEE
Confidence 9999999999999999888777777755533221 123456777889999999888 9999999999998
Q ss_pred EEe
Q 002736 883 LEM 885 (886)
Q Consensus 883 w~l 885 (886)
+.+
T Consensus 503 ~a~ 505 (506)
T KOG0289|consen 503 YAL 505 (506)
T ss_pred eec
Confidence 865
No 243
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.8e-25 Score=244.72 Aligned_cols=271 Identities=17% Similarity=0.317 Sum_probs=220.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEE
Q 002736 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL 653 (886)
Q Consensus 574 l~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~ 653 (886)
+.|+. ...||. +....+.+|+..+.. ...+..+. ...|+++.|++ ++.+||.|..+|.|.|||..+.+.+
T Consensus 183 ldWss-~n~laV-alg~~vylW~~~s~~------v~~l~~~~-~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~ 252 (484)
T KOG0305|consen 183 LDWSS-ANVLAV-ALGQSVYLWSASSGS------VTELCSFG-EELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKT 252 (484)
T ss_pred hhccc-CCeEEE-EecceEEEEecCCCc------eEEeEecC-CCceEEEEECC-CCCEEEEeecCCeEEEEehhhcccc
Confidence 45552 234443 444688999876531 12222333 78899999998 7999999999999999999999999
Q ss_pred EEecc-cCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCC
Q 002736 654 TEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSAD 731 (886)
Q Consensus 654 ~~~~~-h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~D 731 (886)
+.+.+ |...|-+++|+ ...+.+|+.|+.|..+|++...... ..+. |...||.++|+++ +.++|+|+.|
T Consensus 253 ~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~------~~~~~H~qeVCgLkws~d-~~~lASGgnD 322 (484)
T KOG0305|consen 253 RTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVV------STLQGHRQEVCGLKWSPD-GNQLASGGND 322 (484)
T ss_pred ccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhh------hhhhcccceeeeeEECCC-CCeeccCCCc
Confidence 99998 99999999997 5799999999999999999853221 1133 5678999999999 9999999999
Q ss_pred CeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEEEE--CCCcEEEEeCCCCCccccCCCceEeecCCCceeEEE
Q 002736 732 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSAS--TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 807 (886)
Q Consensus 732 g~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~sgs--~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 807 (886)
+.+.|||..... |+..+..|..+|.+++|+ ...+||+|+ .|++|++||+.++. .+.... -.+.|..|.
T Consensus 323 N~~~Iwd~~~~~-p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~------~i~~vd-tgsQVcsL~ 394 (484)
T KOG0305|consen 323 NVVFIWDGLSPE-PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGA------RIDSVD-TGSQVCSLI 394 (484)
T ss_pred cceEeccCCCcc-ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCc------Eecccc-cCCceeeEE
Confidence 999999996655 688999999999999996 788999965 59999999999874 344443 346799999
Q ss_pred EecCCCEEEEE--cCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 808 LSVWDGYVATG--SETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 808 ~sp~g~~lasg--s~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
|++..+-|+++ -.++.|.||+..+.+++.. ..+|...|..++|+|||. .+++|+.|.++++|++
T Consensus 395 Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~-------------l~gH~~RVl~la~SPdg~-~i~t~a~DETlrfw~~ 460 (484)
T KOG0305|consen 395 WSKKYKELLSTHGYSENQITLWKYPSMKLVAE-------------LLGHTSRVLYLALSPDGE-TIVTGAADETLRFWNL 460 (484)
T ss_pred EcCCCCEEEEecCCCCCcEEEEeccccceeee-------------ecCCcceeEEEEECCCCC-EEEEecccCcEEeccc
Confidence 99998655553 3578999999988666543 356788899999999999 9999999999999987
Q ss_pred C
Q 002736 886 V 886 (886)
Q Consensus 886 ~ 886 (886)
.
T Consensus 461 f 461 (484)
T KOG0305|consen 461 F 461 (484)
T ss_pred c
Confidence 3
No 244
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.94 E-value=2.5e-27 Score=253.28 Aligned_cols=200 Identities=14% Similarity=0.142 Sum_probs=154.1
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
+...+...+|++++.+++ ++. ..+.++++||| .+++|.+++.+....+++..++.++.||+.||+|||++||+||
T Consensus 56 e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~ 131 (266)
T cd05064 56 EALTLGQFDHSNIVRLEG-VIT---RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHK 131 (266)
T ss_pred HHHHHhcCCCCCcCeEEE-EEe---cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 334445568999988776 443 34678999999 7889999997655678999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+|||++.++.++++|||.+.........
T Consensus 132 dikp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------ 163 (266)
T cd05064 132 GLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY------------------------------------------------ 163 (266)
T ss_pred cccHhhEEEcCCCcEEECCCcccccccccchh------------------------------------------------
Confidence 99999999999999999999976432110000
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 164 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell 202 (266)
T cd05064 164 -----------------------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVM 202 (266)
T ss_pred -----------------------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHh
Confidence 000013466799999999888999999999999999977
Q ss_pred c----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+ ||...... .....+.....++.+...+..+.+++..||..+|.+||++.++++
T Consensus 203 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 203 SYGERPYWDMSGQ-DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred cCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 5 66544333 233344444444445556678889999999999999999999875
No 245
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.94 E-value=1.2e-27 Score=255.31 Aligned_cols=201 Identities=20% Similarity=0.234 Sum_probs=156.5
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecccC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrDlk 109 (886)
+....|++++..++ ++.. .+.+++++|| .|++|.+++......+++..+..++.||+.||.|||+ .||+|+|||
T Consensus 53 l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~ 128 (265)
T cd06605 53 LHKCNSPYIVGFYG-AFYN---NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVK 128 (265)
T ss_pred HHHCCCCchhhhhe-eeec---CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCC
Confidence 34456888888766 4433 3678899999 6699999996654678999999999999999999999 999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||.+.......
T Consensus 129 ~~ni~~~~~~~~~l~d~g~~~~~~~~~----------------------------------------------------- 155 (265)
T cd06605 129 PSNILVNSRGQIKLCDFGVSGQLVNSL----------------------------------------------------- 155 (265)
T ss_pred HHHEEECCCCCEEEeecccchhhHHHH-----------------------------------------------------
Confidence 999999999999999999874331100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 156 ---------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~ 196 (265)
T cd06605 156 ---------------------------------------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196 (265)
T ss_pred ---------------------------------------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 000256788999999998889999999999999999999
Q ss_pred -CCCCCc----hhhHHhHhhccCCCChhhhc-cChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||.... .....+..+.....+..... ..+.+.++|.+||..+|.+||++.+++.||||+..
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 197 FPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred CCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 665442 22223333333322222222 56778899999999999999999999999999753
No 246
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=5e-27 Score=255.07 Aligned_cols=205 Identities=15% Similarity=0.180 Sum_probs=157.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|++++..++ .+. ....++++||| .|++|.+++.+ ..+++.++..++.||+.||.|||++||+|||||
T Consensus 70 ~l~~~~h~~v~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLk 143 (296)
T cd06654 70 VMRENKNPNIVNYLD-SYL---VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143 (296)
T ss_pred HHHhCCCCCEeeEEE-EEE---eCCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 344567888887666 333 24578999999 78999999954 357999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 144 p~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 171 (296)
T cd06654 144 SDNILLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------------- 171 (296)
T ss_pred HHHEEEcCCCCEEECccccchhcccccc----------------------------------------------------
Confidence 9999999999999999998853211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 172 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~ 213 (296)
T cd06654 172 --------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (296)
T ss_pred --------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC
Confidence 0011257889999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCC-hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
||..................+ +......+.+.+++.+||.++|.+||++.++++||||......
T Consensus 214 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~ 279 (296)
T cd06654 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279 (296)
T ss_pred CCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCCc
Confidence 776554433322222222111 1223355678899999999999999999999999999875443
No 247
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94 E-value=4e-27 Score=254.13 Aligned_cols=199 Identities=20% Similarity=0.218 Sum_probs=155.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC---------------CCcChHHHHHHHHHHHHH
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEI 94 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~ 94 (886)
.+....|++++..++ ++. ..+.++++||| .+++|.++|.... ..+++.+++.++.||+.|
T Consensus 61 ~l~~l~h~~i~~~~~-~~~---~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~a 136 (283)
T cd05048 61 LMSDLQHPNIVCLLG-VCT---KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAG 136 (283)
T ss_pred HHHhcCCcccceEEE-EEc---CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHH
Confidence 345567888888776 443 34568899999 7899999995431 457889999999999999
Q ss_pred HHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccc
Q 002736 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (886)
Q Consensus 95 l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 174 (886)
|.|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 137 l~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~------------------------------------ 180 (283)
T cd05048 137 MEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY------------------------------------ 180 (283)
T ss_pred HHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccc------------------------------------
Confidence 99999999999999999999999999999999998543211000
Q ss_pred cCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccc
Q 002736 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (886)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sD 254 (886)
.......+++.|+|||.+.+..++.++|
T Consensus 181 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sD 208 (283)
T cd05048 181 ----------------------------------------------------RVQSKSLLPVRWMPPEAILYGKFTTESD 208 (283)
T ss_pred ----------------------------------------------------cccCCCcccccccCHHHhccCcCchhhh
Confidence 0001125578899999998888999999
Q ss_pred cchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 255 IwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
||||||++|||++ ||..... ...+..+.....++.....++.+.+|+.+||..+|.+||++.|++++
T Consensus 209 v~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 209 IWSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999996 7755443 33445555555555555677889999999999999999999999873
No 248
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=6.5e-25 Score=218.93 Aligned_cols=272 Identities=19% Similarity=0.295 Sum_probs=223.5
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd 646 (886)
....|+++.|+|.+..|++++.||.+++|++... .....+.|..++.+++|.+ ...+++|+.||.|+.+|
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~--------~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~D 81 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN--------SLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQVRRYD 81 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccch--------hhhhheecCCceeeeeccC--CceEEEeccCceEEEEE
Confidence 4678999999999999999999999999998763 2234557899999999986 78899999999999999
Q ss_pred CCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEE
Q 002736 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLA 726 (886)
Q Consensus 647 ~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~ 726 (886)
+.+++.. .+..|..+|.||.+++ ....+++|+.|++|++||.++ ......+.....|.|+... ++.|+
T Consensus 82 ln~~~~~-~igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~-------~~~~~~~d~~kkVy~~~v~---g~~Lv 149 (323)
T KOG1036|consen 82 LNTGNED-QIGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRN-------KVVVGTFDQGKKVYCMDVS---GNRLV 149 (323)
T ss_pred ecCCcce-eeccCCCceEEEEeec-cCCeEEEcccCccEEEEeccc-------cccccccccCceEEEEecc---CCEEE
Confidence 9988764 4456999999999997 778999999999999999998 5556666666789999886 67899
Q ss_pred EEeCCCeEEEEecCCCCcceEEE-ecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCC---
Q 002736 727 FGSADHRIYYYDLRNSKIPLCTL-IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN--- 801 (886)
Q Consensus 727 ~gs~Dg~I~vwDlr~~~~~~~~~-~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~--- 801 (886)
+|+.|..|.+||+|+...+.+.. ..-+-.+.+|++. ++.=++.+|.||.|.+=.+....+. ...-..|+.|..
T Consensus 150 Vg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~--~skkyaFkCHr~~~~ 227 (323)
T KOG1036|consen 150 VGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEA--QSKKYAFKCHRLSEK 227 (323)
T ss_pred EeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHH--hhhceeEEeeecccC
Confidence 99999999999999988655322 2344567888874 7788899999999988776654211 022456777753
Q ss_pred ------ceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEe
Q 002736 802 ------VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 875 (886)
Q Consensus 802 ------~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~ 875 (886)
+|++++|+|--+.+|||+.||.|.+||..+.+.+..+.-. ...|.+++|+-+|. .||.|+
T Consensus 228 ~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~-------------~~SI~slsfs~dG~-~LAia~ 293 (323)
T KOG1036|consen 228 DTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY-------------ETSISSLSFSMDGS-LLAIAS 293 (323)
T ss_pred CceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC-------------CCceEEEEeccCCC-eEEEEe
Confidence 6999999999999999999999999999999988765421 23499999999999 999887
Q ss_pred C
Q 002736 876 S 876 (886)
Q Consensus 876 ~ 876 (886)
+
T Consensus 294 s 294 (323)
T KOG1036|consen 294 S 294 (323)
T ss_pred c
Confidence 5
No 249
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94 E-value=1e-27 Score=221.34 Aligned_cols=204 Identities=16% Similarity=0.216 Sum_probs=161.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+....|+|+++++.-+. ....+-+++||+..+|..|.+.-++.++.+.++.++.|++.||.|+|++++.||||||
T Consensus 54 llkelkhknivrl~dvlh----sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkp 129 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHDVLH----SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKP 129 (292)
T ss_pred HHHHhhhcceeehhhhhc----cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCc
Confidence 344467888888777222 2356788999999999999988888999999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
.|.||+.+|.+|++|||+++.+|.+.-
T Consensus 130 qnllin~ngelkladfglarafgipvr----------------------------------------------------- 156 (292)
T KOG0662|consen 130 QNLLINRNGELKLADFGLARAFGIPVR----------------------------------------------------- 156 (292)
T ss_pred ceEEeccCCcEEecccchhhhcCCceE-----------------------------------------------------
Confidence 999999999999999999987764421
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~-- 267 (886)
....-+-|.||++|.++.|.+ |+++.|+||.|||+.||..
T Consensus 157 -------------------------------------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanag 199 (292)
T KOG0662|consen 157 -------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_pred -------------------------------------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcC
Confidence 011126699999999999976 9999999999999999998
Q ss_pred -CCCCCchhhHHhHhhccC-------------------CC---Ch--hhhccC----hhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 -PFSTGEEKTRTMSSLRHR-------------------VL---PP--QLLLKF----PKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-------------------~~---~~--~~~~~~----~~~~~li~~~L~~dP~~Rps~~e 318 (886)
|.+++.+-......+... .+ |+ .+.... ....++++++|..+|.+|+++++
T Consensus 200 rplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaea 279 (292)
T KOG0662|consen 200 RPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEA 279 (292)
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHH
Confidence 877776655444333110 01 10 112222 23469999999999999999999
Q ss_pred HhcCCCCCCC
Q 002736 319 LLQSEFLNEP 328 (886)
Q Consensus 319 il~h~~~~~~ 328 (886)
+|+||||...
T Consensus 280 alqhpyf~d~ 289 (292)
T KOG0662|consen 280 ALQHPYFSDF 289 (292)
T ss_pred HhcCcccccc
Confidence 9999999864
No 250
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-28 Score=259.32 Aligned_cols=217 Identities=15% Similarity=0.183 Sum_probs=173.6
Q ss_pred CCCCcccccccCceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhh-cCCCCCcChHHHHHHHHHHHHHH
Q 002736 17 DSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIV 95 (886)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qi~~~l 95 (886)
..+++.+|.|...+... .|+-++.+-| .| ...+..+++||-..|++.+.| ....+.+++...+.++.||+.||
T Consensus 604 ~kqesqlR~EVaILq~l--~HPGiV~le~-M~---ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~AL 677 (888)
T KOG4236|consen 604 TKQESQLRNEVAILQNL--HHPGIVNLEC-MF---ETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVAL 677 (888)
T ss_pred CchHHHHHHHHHHHHhc--CCCCeeEEEE-ee---cCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 34456678886655444 4555544444 22 245678889999777766655 55668899999999999999999
Q ss_pred HhhcccCeeecccCCcceeec---cCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccc
Q 002736 96 YAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (886)
Q Consensus 96 ~~lHs~giiHrDlkP~NIll~---~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 172 (886)
.|||-+||+|+||||+||||. +.-++|+||||+|+.++..++
T Consensus 678 r~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF----------------------------------- 722 (888)
T KOG4236|consen 678 RYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF----------------------------------- 722 (888)
T ss_pred HHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-----------------------------------
Confidence 999999999999999999995 445899999999987764432
Q ss_pred cccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcc
Q 002736 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (886)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~ 252 (886)
....+|||.|+|||++....|..+
T Consensus 723 --------------------------------------------------------RrsVVGTPAYLaPEVLrnkGyNrS 746 (888)
T KOG4236|consen 723 --------------------------------------------------------RRSVVGTPAYLAPEVLRNKGYNRS 746 (888)
T ss_pred --------------------------------------------------------hhhhcCCccccCHHHHhhcccccc
Confidence 112499999999999999999999
Q ss_pred cccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 253 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 253 sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
-|+||.|||+|--|+ ||..+++....+....--..+..|...++.+.+||..+|+..-.+|.+.+..|.|||++..+
T Consensus 747 LDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 747 LDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred ccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 999999999999888 78666665555554444455678888999999999999999999999999999999999764
Q ss_pred C
Q 002736 330 D 330 (886)
Q Consensus 330 ~ 330 (886)
.
T Consensus 827 ~ 827 (888)
T KOG4236|consen 827 T 827 (888)
T ss_pred H
Confidence 3
No 251
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94 E-value=8e-27 Score=250.51 Aligned_cols=203 Identities=17% Similarity=0.196 Sum_probs=157.3
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+....|++++..++ .+. ....+++++|| .+++|.+++... .+++..++.++.||+.||.|||++||+|+||+|
T Consensus 53 l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p 126 (274)
T cd06609 53 LSQCRSPYITKYYG-SFL---KGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKA 126 (274)
T ss_pred HHHcCCCCeeeeeE-EEE---ECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 44456888877666 333 23678899998 789999999653 789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++........
T Consensus 127 ~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 153 (274)
T cd06609 127 ANILLSEEGDVKLADFGVSGQLTSTMS----------------------------------------------------- 153 (274)
T ss_pred HHEEECCCCCEEEcccccceeeccccc-----------------------------------------------------
Confidence 999999999999999999855422100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
......+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 154 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~ 196 (274)
T cd06609 154 -------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP 196 (274)
T ss_pred -------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0011267888999999998889999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhc-cChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
||........ ...+.....+..... .++.+.+++.+||..+|.+||+++++++||||......
T Consensus 197 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 197 PLSDLHPMRV-LFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred CcccCchHHH-HHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 6654443222 222222222222222 45678899999999999999999999999999875443
No 252
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=5e-28 Score=275.77 Aligned_cols=214 Identities=22% Similarity=0.312 Sum_probs=156.4
Q ss_pred cccccCceeecccccccCCCCCCcccccc-ccC--CceEEEEeeCC-cchhhhhcCC-CCCcChHHHHHHHHHHHHHHHh
Q 002736 23 LRKHSDGVELTHGDHLRNQGGLSGVCENE-AAI--DPFVHAIEWGD-VSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYA 97 (886)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~i~~e~~g-~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~ 97 (886)
.+.|.+...+.. +|+|+|.+++.-.... ... -.++|.||||. ++|-++|++. ...|++.++++||.|+++||.+
T Consensus 81 v~~EI~~MK~L~-gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~ 159 (738)
T KOG1989|consen 81 VKREIDIMKLLS-GHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAA 159 (738)
T ss_pred HHHHHHHHHHhc-CCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 466655554443 7999998877222222 222 35789999955 8999999632 3459999999999999999999
Q ss_pred hcccC--eeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccccccccccc
Q 002736 98 AHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (886)
Q Consensus 98 lHs~g--iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 175 (886)
||.+. |||||||-|||||+.+|+.||||||.+.-....... ...
T Consensus 160 mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~----------------------~~e------------ 205 (738)
T KOG1989|consen 160 MHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTS----------------------AQE------------ 205 (738)
T ss_pred HhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCcc----------------------HHH------------
Confidence 99998 999999999999999999999999998543211000 000
Q ss_pred CCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcc
Q 002736 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCA 252 (886)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~ 252 (886)
+.++| .......|+.|+|||.+. +.+++.|
T Consensus 206 ---------------------~~~ve--------------------------~eI~k~TTp~YRsPEMIDlysg~pI~eK 238 (738)
T KOG1989|consen 206 ---------------------VNYVE--------------------------EEIEKYTTPQYRSPEMIDLYSGLPIGEK 238 (738)
T ss_pred ---------------------HHHHH--------------------------HHHHhhCCccccChHHHhhhcCCCCcch
Confidence 00000 001124489999999874 5679999
Q ss_pred cccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 253 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 253 sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
+|||+|||+||-|+. ||...-. ..++....-.|.+...+..+.+||..||+.||.+||++.|++.+
T Consensus 239 sDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 239 SDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred hHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 999999999999987 8865422 23344444445556677889999999999999999999999863
No 253
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.94 E-value=5.3e-27 Score=253.43 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=155.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++...+ .+. ..+.++++||| .+++|.+++... ...+++..+..++.||+.||.|||++||+|||
T Consensus 52 ~il~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~d 127 (285)
T cd05632 52 QILEKVNSQFVVNLAY-AYE---TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRD 127 (285)
T ss_pred HHHHHcCCcCceeEEE-EEe---cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 3445567788777655 222 34578899998 788999888432 34689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++..+.++++|||++.......
T Consensus 128 ikp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 156 (285)
T cd05632 128 LKPENILLDDYGHIRISDLGLAVKIPEGE--------------------------------------------------- 156 (285)
T ss_pred CCHHHEEECCCCCEEEecCCcceecCCCC---------------------------------------------------
Confidence 99999999999999999999884321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 196 (285)
T cd05632 157 ----------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIE 196 (285)
T ss_pred ----------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHh
Confidence 0011267999999999998889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhh--ccCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCCc
Q 002736 268 ---PFSTGEEKTRTMSSL--RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~ 329 (886)
||............. .....+.......+.+.+|+.+||..||.+||+ +.+++.|+||....
T Consensus 197 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 197 GQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence 776544322211111 111111222345567889999999999999999 88999999998763
No 254
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.94 E-value=2.2e-27 Score=257.37 Aligned_cols=206 Identities=18% Similarity=0.283 Sum_probs=157.8
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .|++|.+++.. ..+++.++..++.||+.||+|||++||+||||
T Consensus 71 ~~l~~l~h~~ii~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl 144 (292)
T cd06658 71 VIMRDYHHENVVDMYN-SYL---VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDI 144 (292)
T ss_pred HHHHhCCCCcHHHHHH-hee---cCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence 3455567888877666 222 34678999999 68899998854 35899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++........
T Consensus 145 kp~Nill~~~~~~kL~dfg~~~~~~~~~~--------------------------------------------------- 173 (292)
T cd06658 145 KSDSILLTSDGRIKLSDFGFCAQVSKEVP--------------------------------------------------- 173 (292)
T ss_pred CHHHEEEcCCCCEEEccCcchhhcccccc---------------------------------------------------
Confidence 99999999999999999998843211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 174 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g 214 (292)
T cd06658 174 ---------------------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 214 (292)
T ss_pred ---------------------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 0011367889999999988889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCC--hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCch
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~ 332 (886)
||...... ..+..+.....+ +......+.+.+++.+||..||.+|||+.++++||||.....+.
T Consensus 215 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 215 EPPYFNEPPL-QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred CCCCCCCCHH-HHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 77544332 223333222111 11223456778999999999999999999999999999765544
No 255
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.94 E-value=1.8e-26 Score=252.79 Aligned_cols=202 Identities=17% Similarity=0.173 Sum_probs=156.8
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++.+..++ ++.+ .+..+++|||..++|.+++......+++.+++.++.||+.||.|||++||+|+|||
T Consensus 73 ~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~ 148 (313)
T cd06633 73 KFLQQLKHPNTIEYKG-CYLK---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK 148 (313)
T ss_pred HHHHhCCCCCCccEEE-EEEe---CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 3455567888888776 4433 45688999998889999886655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++......
T Consensus 149 p~nili~~~~~~kL~dfg~~~~~~~~------------------------------------------------------ 174 (313)
T cd06633 149 AGNILLTEPGQVKLADFGSASKSSPA------------------------------------------------------ 174 (313)
T ss_pred hhhEEECCCCCEEEeecCCCcccCCC------------------------------------------------------
Confidence 99999999999999999987321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcccccchHHHHHHHHh
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDIwSlGvil~eLl 266 (886)
....|+..|+|||.+. ...++.++|||||||++|||+
T Consensus 175 ----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~ 214 (313)
T cd06633 175 ----------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 214 (313)
T ss_pred ----------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHH
Confidence 0126788899999984 355889999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
+ ||............................+.+|+.+||+++|.+||++.++++||||...+
T Consensus 215 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 215 ERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred hCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 8 67665544433333322221111222345678999999999999999999999999999754
No 256
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=6.9e-27 Score=249.24 Aligned_cols=202 Identities=17% Similarity=0.195 Sum_probs=157.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+. ....++++||| .|++|.++|.+. ..+++..++.++.||+.||.|||++|++|+|||
T Consensus 46 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 46 ILEECNHPFIVKLYR-TFK---DKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred HHHhCCCCCEeeeee-eEE---cCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 345567888888776 333 34678899999 889999999654 468999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++.......
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~----------------------------------------------------- 147 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ----------------------------------------------------- 147 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc-----------------------------------------------------
Confidence 999999999999999999885432110
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 148 --------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 189 (262)
T cd05572 148 --------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR 189 (262)
T ss_pred --------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCC
Confidence 0011256888999999988889999999999999999999
Q ss_pred -CCCCCch-hhHHhHhhc-cCCCChhhhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCC
Q 002736 268 -PFSTGEE-KTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~ 328 (886)
||..... ....+..+. ....+..+....+.+.+++.+||..+|.+||+ +.|+++||||+..
T Consensus 190 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 190 PPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred CCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 7755441 222222222 12222223334678889999999999999999 9999999999864
No 257
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=5.5e-27 Score=249.78 Aligned_cols=201 Identities=17% Similarity=0.205 Sum_probs=154.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++.+++ .. ...+.++++||| .|++|.+++.+....+++.++..++.||+.||.|||++||+|+||
T Consensus 52 ~~l~~~~h~~i~~~~~-~~---~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl 127 (262)
T cd06613 52 SMLKECRHPNIVAYFG-SY---LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDI 127 (262)
T ss_pred HHHHhCCCCChhceEE-EE---EeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Confidence 3455678999988776 33 235678999999 778999999765567999999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++........
T Consensus 128 ~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------------------------------------------- 156 (262)
T cd06613 128 KGANILLTEDGDVKLADFGVSAQLTATIA--------------------------------------------------- 156 (262)
T ss_pred ChhhEEECCCCCEEECccccchhhhhhhh---------------------------------------------------
Confidence 99999999999999999999853311100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC---CCCcccccchHHHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDIwSlGvil~eL 265 (886)
......++..|+|||.+.+. .++.++|||||||++|||
T Consensus 157 ---------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~ 197 (262)
T cd06613 157 ---------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIEL 197 (262)
T ss_pred ---------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHH
Confidence 00112678889999999876 789999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCChh---hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 324 (886)
++ ||..................++. ....++.+.+|+.+||..+|..||++.+++.|+|
T Consensus 198 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 198 AELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99 66544433322222222111111 1223456789999999999999999999999998
No 258
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.94 E-value=6.2e-27 Score=256.11 Aligned_cols=210 Identities=18% Similarity=0.217 Sum_probs=155.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++..++ ++.+ ...+.++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|||||
T Consensus 58 ~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 135 (309)
T cd07845 58 TLLLNLRHPNIVELKE-VVVG-KHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLK 135 (309)
T ss_pred HHHHhCCCCCCcceEE-EEec-CCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 3445567888887666 3332 2345689999998889999997655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++........
T Consensus 136 p~nil~~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------------- 163 (309)
T cd07845 136 VSNLLLTDKGCLKIADFGLARTYGLPAK---------------------------------------------------- 163 (309)
T ss_pred HHHEEECCCCCEEECccceeeecCCccC----------------------------------------------------
Confidence 9999999999999999999854421100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++++|+|||.+.+ ..++.++|||||||++|||++
T Consensus 164 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g 205 (309)
T cd07845 164 --------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH 205 (309)
T ss_pred --------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhC
Confidence 0001145788999999876 448999999999999999999
Q ss_pred --CCCCCchhhHHhHhhcc--C------------------CCCh--------hhhccChhhHHHHHHccCCCCCCCCCHH
Q 002736 268 --PFSTGEEKTRTMSSLRH--R------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~--~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
||............... . ..+. .....++.+.+||.+||++||++|||+.
T Consensus 206 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 285 (309)
T cd07845 206 KPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE 285 (309)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH
Confidence 56443332222111110 0 0000 0112356778999999999999999999
Q ss_pred HHhcCCCCCCCcCc
Q 002736 318 ELLQSEFLNEPRDS 331 (886)
Q Consensus 318 eil~h~~~~~~~~~ 331 (886)
|+++||||.....+
T Consensus 286 ~il~h~~f~~~~~~ 299 (309)
T cd07845 286 EALESSYFKEKPLP 299 (309)
T ss_pred HHhcChhhccCCCC
Confidence 99999999876543
No 259
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.94 E-value=5.9e-27 Score=252.39 Aligned_cols=203 Identities=20% Similarity=0.255 Sum_probs=156.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+. ..+.++++||| .+++|.+++.+....+++.+++.++.||+.||.|||++||+|+|||
T Consensus 55 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~ 130 (280)
T cd06611 55 ILSECKHPNIVGLYE-AYF---YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLK 130 (280)
T ss_pred HHHhCCCCceeEEEE-EEe---cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 445567888888777 333 34678899999 7889999997666679999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 131 p~nili~~~~~~~l~d~g~~~~~~~~~~---------------------------------------------------- 158 (280)
T cd06611 131 AGNILLTLDGDVKLADFGVSAKNKSTLQ---------------------------------------------------- 158 (280)
T ss_pred hhhEEECCCCCEEEccCccchhhccccc----------------------------------------------------
Confidence 9999999999999999998743211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-----CCCCCcccccchHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDIwSlGvil~e 264 (886)
......|++.|+|||.+. +..++.++|||||||++||
T Consensus 159 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~ 200 (280)
T cd06611 159 --------------------------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE 200 (280)
T ss_pred --------------------------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHH
Confidence 011236788999999975 3447889999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCC--hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
|++ ||..... ...+..+.....+ ......+..+.+++.+||+.+|.+||++.++++||||...
T Consensus 201 l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 201 LAQMEPPHHELNP-MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHhCCCCcccCCH-HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 999 6644433 2333333322221 1122345678899999999999999999999999999875
No 260
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.94 E-value=3.8e-27 Score=250.12 Aligned_cols=207 Identities=16% Similarity=0.186 Sum_probs=156.8
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
.|++|.+. +...+|++++..++ .+.+ ...+++++|| .+++|.+++......+++.+++.++.||+.||.|||+
T Consensus 44 ~~~~e~~~--~~~l~~~~i~~~~~-~~~~---~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~ 117 (256)
T cd06612 44 EIIKEISI--LKQCDSPYIVKYYG-SYFK---NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS 117 (256)
T ss_pred HHHHHHHH--HHhCCCCcEeeeee-eeec---CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34444433 33348888888776 3332 3678899999 7889999997666788999999999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
.||+|+||+|+||+++.++.++++|||++........
T Consensus 118 ~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------- 154 (256)
T cd06612 118 NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA------------------------------------------- 154 (256)
T ss_pred CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-------------------------------------------
Confidence 9999999999999999999999999999854321100
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
......|+..|+|||.+.+..++.++|||||||
T Consensus 155 -----------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~ 187 (256)
T cd06612 155 -----------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGI 187 (256)
T ss_pred -----------------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHH
Confidence 001125678899999998888999999999999
Q ss_pred HHHHHhc---CCCCCchhhHHhHhhccCCCC--hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 261 il~eLl~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
++|+|++ ||......... ........+ .........+.+++.+||..+|.+||++.|+|+||||
T Consensus 188 il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 188 TAIEMAEGKPPYSDIHPMRAI-FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHhCCCCCCCcchhhhh-hhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 9999999 66543332222 222111111 1122344678899999999999999999999999997
No 261
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=4.2e-27 Score=260.14 Aligned_cols=208 Identities=15% Similarity=0.161 Sum_probs=152.0
Q ss_pred ccccCCCCCCcccc-ccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCE-NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~-~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++.+++ .+. .......++++||+.+++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus 60 ~h~~iv~~~~-~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nil 137 (332)
T cd07857 60 GHKNITCLYD-MDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLL 137 (332)
T ss_pred CCCChheeee-eeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeE
Confidence 5888887666 322 11234567899999888999999554 57899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+||+|||++..........
T Consensus 138 i~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------------------------------- 162 (332)
T cd07857 138 VNADCELKICDFGLARGFSENPGEN------------------------------------------------------- 162 (332)
T ss_pred EcCCCCEEeCcCCCceecccccccc-------------------------------------------------------
Confidence 9999999999999986442110000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc---CCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
.......+|++.|+|||.+.+ ..++.++|||||||++|+|++ ||.
T Consensus 163 -------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 163 -------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred -------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 000112378999999998766 458999999999999999998 554
Q ss_pred CCchhhHHhHhhc--------------------------cC---CCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 271 TGEEKTRTMSSLR--------------------------HR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 271 ~~~~~~~~~~~~~--------------------------~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
...........+. .. .++.......+.+.+|+.+||++||.+|||+.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 212 GKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 3322111100000 00 001111223567889999999999999999999999
Q ss_pred CCCCCCCcCc
Q 002736 322 SEFLNEPRDS 331 (886)
Q Consensus 322 h~~~~~~~~~ 331 (886)
||||.....+
T Consensus 292 ~~~~~~~~~~ 301 (332)
T cd07857 292 HPYLAIWHDP 301 (332)
T ss_pred ChhhhhhcCc
Confidence 9999765433
No 262
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.2e-25 Score=243.02 Aligned_cols=256 Identities=21% Similarity=0.340 Sum_probs=210.4
Q ss_pred CCCCCEE---EEEEcC-CCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCc
Q 002736 566 NSSNLVC---SLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (886)
Q Consensus 566 ~h~~~V~---sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~ 641 (886)
.|...|. ++..+. ++++|+|||.||.|++|+.......... .+......|...|+.+.... .++.|+|+|.|-+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~-~~~asme~HsDWVNDiiL~~-~~~tlIS~SsDtT 96 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPST-PYIASMEHHSDWVNDIILCG-NGKTLISASSDTT 96 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCccc-chhhhhhhhHhHHhhHHhhc-CCCceEEecCCce
Confidence 3555565 566664 6778999999999999998763322111 12233345888999988876 5789999999999
Q ss_pred EEEEECCCc--eEEEEecccCCcEEEEEE-ccCCCCEEEEEeCCCcEEEEeCchhhh--hhccCc-eeeee--ecCCCeE
Q 002736 642 VQVWDVSRS--QVLTEMREHERRVWSIDF-SSADPTLLASGSDDGSVKLWSINQAIL--LLHLGV-SIGTI--KTKANVC 713 (886)
Q Consensus 642 V~iWd~~t~--~~~~~~~~h~~~v~~v~~-~p~~~~~l~sgs~Dg~v~lwd~~~~~~--~~~~~~-~~~~~--~~~~~v~ 713 (886)
|++|+...+ -++.++..|.+-|.|+++ .+ +..++|+|+-|+.|.|||+++... +..+.. ....+ ..+..|+
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siY 175 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIY 175 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeeccc-CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcccee
Confidence 999999877 577888999999999999 54 888999999999999999997522 111111 11111 2356799
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCC
Q 002736 714 CVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTP 792 (886)
Q Consensus 714 ~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~ 792 (886)
+++.++. +..|++|+..+.+++||-|+.+. +..++||...|..+..+ ||..++|||.||+|++||+... ++
T Consensus 176 SLA~N~t-~t~ivsGgtek~lr~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ------rC 247 (735)
T KOG0308|consen 176 SLAMNQT-GTIIVSGGTEKDLRLWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ------RC 247 (735)
T ss_pred eeecCCc-ceEEEecCcccceEEeccccccc-eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc------ce
Confidence 9999998 88999999999999999999985 88889999999999997 9999999999999999999987 45
Q ss_pred ceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCC
Q 002736 793 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 832 (886)
Q Consensus 793 ~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~ 832 (886)
+.++..|+..|+++..+|+=.++.+|+.||.|+.=|+.+.
T Consensus 248 l~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 248 LATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 9999999999999999999999999999999999998874
No 263
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=7.3e-27 Score=255.30 Aligned_cols=202 Identities=16% Similarity=0.131 Sum_probs=155.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++...+ +|.+ .+..+++|||..++|.+++......+++.++..++.||+.||.|||++||+||||+
T Consensus 67 ~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~ 142 (307)
T cd06607 67 RFLQQLRHPNTIEYKG-CYLR---EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIK 142 (307)
T ss_pred HHHHhCCCCCEEEEEE-EEEe---CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 3455678888888766 5543 45688999998788888886544678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++......
T Consensus 143 p~nIl~~~~~~~kL~dfg~~~~~~~~------------------------------------------------------ 168 (307)
T cd06607 143 AGNILLTEPGTVKLADFGSASLVSPA------------------------------------------------------ 168 (307)
T ss_pred cccEEECCCCCEEEeecCcceecCCC------------------------------------------------------
Confidence 99999999999999999987432100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcccccchHHHHHHHHh
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDIwSlGvil~eLl 266 (886)
....+++.|+|||.+. ...++.++|||||||++|||+
T Consensus 169 ----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~ 208 (307)
T cd06607 169 ----------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208 (307)
T ss_pred ----------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHH
Confidence 0125677899999884 345889999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCChh-hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
+ ||........... +.....+.. ....+..+.+++.+||..+|.+||++.+++.||||.....
T Consensus 209 tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 209 ERKPPLFNMNAMSALYH-IAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred cCCCCCCCccHHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 9 6655443333322 222222211 1224467789999999999999999999999999987543
No 264
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=7.3e-27 Score=252.38 Aligned_cols=205 Identities=18% Similarity=0.312 Sum_probs=158.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+. ..+..++++|| .|++|.+++.. ..+++.+++.++.||+.||.|||++||+||||+
T Consensus 69 ~l~~~~h~~vv~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~ 142 (285)
T cd06648 69 IMRDYQHPNIVEMYS-SYL---VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIK 142 (285)
T ss_pred HHHHcCCCChheEEE-EEE---cCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 444567888888776 222 34667888888 78999999965 468999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||.+........
T Consensus 143 p~Nil~~~~~~~~l~d~g~~~~~~~~~~---------------------------------------------------- 170 (285)
T cd06648 143 SDSILLTSDGRVKLSDFGFCAQVSKEVP---------------------------------------------------- 170 (285)
T ss_pred hhhEEEcCCCcEEEcccccchhhccCCc----------------------------------------------------
Confidence 9999999999999999998743211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 171 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~ 212 (285)
T cd06648 171 --------------------------------------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212 (285)
T ss_pred --------------------------------------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCC
Confidence 0011267889999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCCh--hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCch
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~ 332 (886)
||..... ...+..+.....+. .....++.+.+|+.+||..+|.+||++.++++||||.....+.
T Consensus 213 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 213 PPYFNEPP-LQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred CCCcCCCH-HHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcc
Confidence 7755433 33333333332211 1222456788999999999999999999999999998866543
No 265
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=4.7e-27 Score=255.26 Aligned_cols=203 Identities=15% Similarity=0.184 Sum_probs=157.0
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|++++..++ .+. ..+.+++++|| .|++|.+++.+ ..+++.++..++.||+.||.|||++||+|+|||
T Consensus 69 ~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~ 142 (296)
T cd06655 69 VMKELKNPNIVNFLD-SFL---VGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQVIHRDIK 142 (296)
T ss_pred HHHhcCCCceeeeee-eEe---cCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 344567888887666 443 34678899999 88999999854 358999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++........
T Consensus 143 p~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 170 (296)
T cd06655 143 SDNVLLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------------- 170 (296)
T ss_pred HHHEEECCCCCEEEccCccchhcccccc----------------------------------------------------
Confidence 9999999999999999998854321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 171 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 171 --------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred --------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 0001257888999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCC-CChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 268 -PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
||................. .........+.+.+|+.+||..||.+||++.++++||||....
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 213 PPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred CCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 7765544333222222111 1122334567788999999999999999999999999998644
No 266
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=1.1e-26 Score=250.91 Aligned_cols=203 Identities=18% Similarity=0.238 Sum_probs=153.1
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+.+.+|++++..++ ++. ..+.++++|||..++|..++.. ....+++..++.++.||+.||+|||++||+|+|
T Consensus 50 ~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~ 125 (284)
T cd07860 50 ISLLKELNHPNIVKLLD-VIH---TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 125 (284)
T ss_pred HHHHHhcCCCCCcchhh-hcc---cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 33455567899888777 443 3567899999977899998854 345789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|+|+||+++.++.+|++|||++...+....
T Consensus 126 l~p~nill~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 155 (284)
T cd07860 126 LKPQNLLINTEGAIKLADFGLARAFGVPVR-------------------------------------------------- 155 (284)
T ss_pred CCHHHEEECCCCCEEEeeccchhhcccCcc--------------------------------------------------
Confidence 999999999999999999999854321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHh
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELF 266 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl 266 (886)
......++++|+|||.+.+.. ++.++|||||||++|||+
T Consensus 156 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~ 195 (284)
T cd07860 156 ----------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 195 (284)
T ss_pred ----------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHH
Confidence 001114678899999987754 688999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCC---------------------------hhhhccChhhHHHHHHccCCCCCCCCCH
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLP---------------------------PQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
+ ||..................+ .......+.+.++|.+||..||.+||++
T Consensus 196 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 275 (284)
T cd07860 196 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA 275 (284)
T ss_pred HCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH
Confidence 9 665544332222211110000 0112245667799999999999999999
Q ss_pred HHHhcCCCC
Q 002736 317 GELLQSEFL 325 (886)
Q Consensus 317 ~eil~h~~~ 325 (886)
.++++||||
T Consensus 276 ~~~l~~~~f 284 (284)
T cd07860 276 KAALAHPFF 284 (284)
T ss_pred HHHhcCCCC
Confidence 999999997
No 267
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=7.4e-27 Score=251.38 Aligned_cols=201 Identities=17% Similarity=0.192 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++.+.. .+. ..+.++++||| .|++|.+++.+. ..+++.+++.|+.||+.||.|||++||+||||||
T Consensus 51 ~~~~~~~~i~~~~~-~~~---~~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p 125 (278)
T cd05606 51 VSTGDCPFIVCMSY-AFH---TPDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKP 125 (278)
T ss_pred HHhCCCCcEeeeee-eee---cCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCH
Confidence 33457777776555 222 34678899999 889999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.+|++|||++.......
T Consensus 126 ~nili~~~~~~kl~dfg~~~~~~~~~------------------------------------------------------ 151 (278)
T cd05606 126 ANILLDEHGHVRISDLGLACDFSKKK------------------------------------------------------ 151 (278)
T ss_pred HHEEECCCCCEEEccCcCccccCccC------------------------------------------------------
Confidence 99999999999999999985331110
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....|+..|+|||.+.+. .++.++||||+||++|||++
T Consensus 152 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~ 193 (278)
T cd05606 152 --------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 193 (278)
T ss_pred --------------------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCC
Confidence 0012678899999999754 58999999999999999998
Q ss_pred -CCCCCchhh-HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 268 -PFSTGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 268 -pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
||....... ...........+..+...++.+.+++.+||..+|.+|| ++.++++||||....
T Consensus 194 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 194 SPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 775442111 11111111111222233467889999999999999999 999999999998754
No 268
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=1.3e-26 Score=249.65 Aligned_cols=201 Identities=18% Similarity=0.202 Sum_probs=151.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+.. .+.++++||| .+++|..+ ..+++..+..++.||+.||.|||+.||+|+|||
T Consensus 52 ~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 122 (279)
T cd06619 52 ILYKCDSPYIIGFYG-AFFV---ENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVK 122 (279)
T ss_pred HHHhCCCCCeeeEEE-EEEE---CCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCC
Confidence 455668888888777 3432 4567889999 77777654 246889999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.++++|||++......
T Consensus 123 p~Nill~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 148 (279)
T cd06619 123 PSNMLVNTRGQVKLCDFGVSTQLVNS------------------------------------------------------ 148 (279)
T ss_pred HHHEEECCCCCEEEeeCCcceecccc------------------------------------------------------
Confidence 99999999999999999998533111
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....+|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 149 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~ 190 (279)
T cd06619 149 --------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR 190 (279)
T ss_pred --------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCC
Confidence 0011267889999999998889999999999999999998
Q ss_pred -CCCCCchh------hHHhHhhccCCCCh-hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCch
Q 002736 268 -PFSTGEEK------TRTMSSLRHRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (886)
Q Consensus 268 -pf~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~ 332 (886)
||...... ......+.....+. ......+++.+|+.+||+.+|.+||+++|+++||||.......
T Consensus 191 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~ 263 (279)
T cd06619 191 FPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263 (279)
T ss_pred CCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCcc
Confidence 76432211 11111111111111 1123456788999999999999999999999999998764433
No 269
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=5.9e-27 Score=254.84 Aligned_cols=207 Identities=17% Similarity=0.251 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++++..++ ++.+ .+.++++|||.+++|.+++......+++.+++.++.||++||.|||++||+|+||||
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p 130 (298)
T cd07841 55 LLQELKHPNIIGLLD-VFGH---KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKP 130 (298)
T ss_pred HHhhcCCCCChhhhh-eeec---CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCh
Confidence 445566888888776 4433 567899999999999999966544789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++|+|||++........
T Consensus 131 ~nill~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 157 (298)
T cd07841 131 NNLLIASDGVLKLADFGLARSFGSPNR----------------------------------------------------- 157 (298)
T ss_pred hhEEEcCCCCEEEccceeeeeccCCCc-----------------------------------------------------
Confidence 999999999999999999854422100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++++|+|||.+.+ ..++.++|||||||++|||++
T Consensus 158 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~ 200 (298)
T cd07841 158 -------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200 (298)
T ss_pred -------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 0001145788999999865 457999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCC----------------------CC-----hhhhccChhhHHHHHHccCCCCCCCCCHHHHh
Q 002736 268 PFSTGEEKTRTMSSLRHRV----------------------LP-----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~----------------------~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 320 (886)
|++...........+.... .+ ..+......+.+|+.+||.++|.+|||+.|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 201 PFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred ccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 5444333322221111100 00 01122345677999999999999999999999
Q ss_pred cCCCCCCCcCc
Q 002736 321 QSEFLNEPRDS 331 (886)
Q Consensus 321 ~h~~~~~~~~~ 331 (886)
+|+||.....+
T Consensus 281 ~~~~~~~~~~~ 291 (298)
T cd07841 281 EHPYFSNDPAP 291 (298)
T ss_pred hCccccCCCCC
Confidence 99999986543
No 270
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.3e-25 Score=219.22 Aligned_cols=291 Identities=15% Similarity=0.257 Sum_probs=244.3
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcE
Q 002736 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (886)
Q Consensus 563 ~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V 642 (886)
.+.+|+..|..++.......+.|++.|.+.+||.+++. .+.....+|.+.|++|.|++ .+.++++++.|++.
T Consensus 143 e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg-------~CL~~Y~GH~GSVNsikfh~-s~~L~lTaSGD~ta 214 (481)
T KOG0300|consen 143 ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESG-------ACLATYTGHTGSVNSIKFHN-SGLLLLTASGDETA 214 (481)
T ss_pred hhcccccceeeehhhcCCcceeecccccceeEEeeccc-------cceeeecccccceeeEEecc-ccceEEEccCCcch
Confidence 45789999999999988889999999999999999874 34455668999999999998 79999999999999
Q ss_pred EEEEC------CC----------------------------------ceEEEEecccCCcEEEEEEccCCCCEEEEEeCC
Q 002736 643 QVWDV------SR----------------------------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDD 682 (886)
Q Consensus 643 ~iWd~------~t----------------------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 682 (886)
.||.. .. ..++..+.+|.+.|.+.+|.. .+..+++++-|
T Consensus 215 HIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWD 293 (481)
T KOG0300|consen 215 HIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWD 293 (481)
T ss_pred HHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-Ccceeeeeecc
Confidence 99961 11 013566789999999999995 89999999999
Q ss_pred CcEEEEeCchhhhhhccCceeeeeec-CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEe
Q 002736 683 GSVKLWSINQAILLLHLGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKF 761 (886)
Q Consensus 683 g~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f 761 (886)
.+..|||+++ +..+..+.+ ...++-++-+|. .+++++.|.|.+.++||+|..-..+..|+||...|+++.|
T Consensus 294 RTAnlwDVEt-------ge~v~~LtGHd~ELtHcstHpt-QrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF 365 (481)
T KOG0300|consen 294 RTANLWDVET-------GEVVNILTGHDSELTHCSTHPT-QRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF 365 (481)
T ss_pred ccceeeeecc-------CceeccccCcchhccccccCCc-ceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE
Confidence 9999999999 777776664 455888888998 8999999999999999999766668899999999999999
Q ss_pred cCCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccC
Q 002736 762 VDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFN 841 (886)
Q Consensus 762 ~~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~ 841 (886)
..+..+++||.|.+|++||+++.. .|+.++. ..++++-++.+..+..||.--.+..|++||++.. .+..+
T Consensus 366 ~~dd~vVSgSDDrTvKvWdLrNMR-----splATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~-RlaRl--- 435 (481)
T KOG0300|consen 366 NTDDRVVSGSDDRTVKVWDLRNMR-----SPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGN-RLARL--- 435 (481)
T ss_pred ecCCceeecCCCceEEEeeecccc-----Ccceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCC-ccccC---
Confidence 988899999999999999999885 5788877 4567999999999999999999999999998753 33222
Q ss_pred CCCCCCCCccccCCCcEEEEEEccCCCc-EEEEEeCCCCEEEEEe
Q 002736 842 HADPLSGPETDDAAQFISSVCWRGQSSN-TLVAANSSGNIKILEM 885 (886)
Q Consensus 842 ~~~~~~~~~~~~~~~~V~~v~~s~~~~~-~l~s~~~dg~I~iw~l 885 (886)
+...-.+|..-|.|++|..+-+. -|++++.|..+.=|++
T Consensus 436 -----PrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~i 475 (481)
T KOG0300|consen 436 -----PRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKI 475 (481)
T ss_pred -----CcccccccceeeeeeeccccCcccccccccccceeeeeEe
Confidence 11122567788999999765430 3899999999999986
No 271
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.94 E-value=5.5e-27 Score=262.83 Aligned_cols=194 Identities=17% Similarity=0.205 Sum_probs=147.8
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------------------------------
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------------------- 75 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~--------------------------------------- 75 (886)
+|++++.+++ .|. ..+.++++||| .+++|.++|.+.
T Consensus 100 ~h~nIv~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (374)
T cd05106 100 QHKNIVNLLG-ACT---HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSS 175 (374)
T ss_pred cCCceeeEee-Eec---CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccc
Confidence 7888888776 444 34678999999 889999988432
Q ss_pred ------------------------------CCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeee
Q 002736 76 ------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 125 (886)
Q Consensus 76 ------------------------------~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~d 125 (886)
...+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~D 255 (374)
T cd05106 176 QGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICD 255 (374)
T ss_pred cccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEee
Confidence 12478889999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccc
Q 002736 126 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQE 205 (886)
Q Consensus 126 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (886)
||+++........
T Consensus 256 fGla~~~~~~~~~------------------------------------------------------------------- 268 (374)
T cd05106 256 FGLARDIMNDSNY------------------------------------------------------------------- 268 (374)
T ss_pred ceeeeeccCCcce-------------------------------------------------------------------
Confidence 9998543211000
Q ss_pred ccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHh
Q 002736 206 HKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSS 281 (886)
Q Consensus 206 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~ 281 (886)
.......++..|+|||++.+..++.++|||||||++|||++ ||............
T Consensus 269 ---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~ 327 (374)
T cd05106 269 ---------------------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM 327 (374)
T ss_pred ---------------------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH
Confidence 00000134567999999988889999999999999999985 77554443333333
Q ss_pred hccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 282 LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+.....+......++++.+++.+||+.||.+||++.++++
T Consensus 328 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 328 VKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 3333333333334678899999999999999999999976
No 272
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.94 E-value=6.2e-27 Score=250.09 Aligned_cols=206 Identities=18% Similarity=0.158 Sum_probs=154.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+....|++++..++ ++.+ .....++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+|+||
T Consensus 56 ~~l~~l~h~~i~~~~~-~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl 132 (265)
T cd06652 56 QLLKNLLHERIVQYYG-CLRD-PMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDI 132 (265)
T ss_pred HHHHhcCCCCeeeEEe-Eecc-CCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence 3455567888887666 3322 223567889999 788999999654 45799999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++..........
T Consensus 133 ~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~------------------------------------------------- 163 (265)
T cd06652 133 KGANILRDSVGNVKLGDFGASKRLQTICLSG------------------------------------------------- 163 (265)
T ss_pred CHHHEEecCCCCEEECcCccccccccccccc-------------------------------------------------
Confidence 9999999999999999999885432110000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g 205 (265)
T cd06652 164 --------------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTE 205 (265)
T ss_pred --------------------------------------cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhC
Confidence 00011257888999999988889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
||..................+..+......+.+++.+|+. +|.+||+++++++|||+.
T Consensus 206 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 206 KPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred CCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 7654433333333222222232333345667799999995 999999999999999974
No 273
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.94 E-value=2.2e-26 Score=251.58 Aligned_cols=205 Identities=16% Similarity=0.112 Sum_probs=156.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++++...+ ++.+ .+.++++|||..++|.+++......+++.++..++.||+.||.|||++||+||||||
T Consensus 68 ~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p 143 (308)
T cd06634 68 FLQKLRHPNTIQYRG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 143 (308)
T ss_pred HHHhCCCCCcccEEE-EEEc---CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 445567888887666 4443 467889999977899888855556789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++......
T Consensus 144 ~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 168 (308)
T cd06634 144 GNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------------- 168 (308)
T ss_pred HhEEECCCCcEEECCcccceeecCc-------------------------------------------------------
Confidence 9999999999999999987432110
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcccccchHHHHHHHHhc
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDIwSlGvil~eLl~ 267 (886)
....|++.|+|||.+. ...++.++|||||||++|||++
T Consensus 169 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 209 (308)
T cd06634 169 ---------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (308)
T ss_pred ---------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc
Confidence 0125678899999975 3458899999999999999998
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCchH
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~~~ 333 (886)
||............................+.+||.+||..+|.+||++.++++|||+.....+..
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~ 278 (308)
T cd06634 210 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTV 278 (308)
T ss_pred CCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhH
Confidence 665544333332222222221122234566789999999999999999999999999988655443
No 274
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=9.4e-27 Score=254.63 Aligned_cols=209 Identities=17% Similarity=0.267 Sum_probs=151.9
Q ss_pred eeecccccccCCCCCCcccccccc-----CCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
..+....|++++..++ +|..... ...++++|||.+++|.+++.+....+++.+++.++.||+.||.|||++||+
T Consensus 63 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~ 141 (310)
T cd07865 63 KILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKIL 141 (310)
T ss_pred HHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3445567888877666 5554332 356799999988899999866555789999999999999999999999999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
|+||||+||+++.++.+|++|||++..........
T Consensus 142 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------- 176 (310)
T cd07865 142 HRDMKAANILITKDGILKLADFGLARAFSLSKNSK--------------------------------------------- 176 (310)
T ss_pred ccCCCHHHEEECCCCcEEECcCCCcccccCCcccC---------------------------------------------
Confidence 99999999999999999999999985432110000
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~ 263 (886)
+......+++..|+|||.+.+.. ++.++|||||||++|
T Consensus 177 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~ 215 (310)
T cd07865 177 -----------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMA 215 (310)
T ss_pred -----------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHH
Confidence 00001125788899999987654 789999999999999
Q ss_pred HHhc---CCCCCchhhHH--hHhhccCCCChh----------------------------hhccChhhHHHHHHccCCCC
Q 002736 264 ELFC---PFSTGEEKTRT--MSSLRHRVLPPQ----------------------------LLLKFPKEASFCLWLLHPEP 310 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~--~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~L~~dP 310 (886)
||++ ||......... ...+.....+.. .....+.+.+||.+||..||
T Consensus 216 el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 216 EMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 9998 55433322111 111111100000 00123456799999999999
Q ss_pred CCCCCHHHHhcCCCC
Q 002736 311 SGRPKMGELLQSEFL 325 (886)
Q Consensus 311 ~~Rps~~eil~h~~~ 325 (886)
.+|||++|+++||||
T Consensus 296 ~~R~t~~e~l~h~~f 310 (310)
T cd07865 296 AKRIDADTALNHDFF 310 (310)
T ss_pred hhccCHHHHhcCCCC
Confidence 999999999999997
No 275
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94 E-value=6.2e-27 Score=261.05 Aligned_cols=204 Identities=20% Similarity=0.264 Sum_probs=151.0
Q ss_pred ceeecccccccCCCCCCccccccc---cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
...+...+|++++..++ ++.... +...+|++|||.+++|.+++... +++..+..++.||+.||.|||++||+|
T Consensus 66 ~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H 141 (353)
T cd07850 66 LVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIH 141 (353)
T ss_pred HHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 34455568888887766 433222 23457999999888999988543 899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+||+++.++.+|++|||++.......
T Consensus 142 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 172 (353)
T cd07850 142 RDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------- 172 (353)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeCCCCC-------------------------------------------------
Confidence 9999999999999999999999985432110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l 210 (353)
T cd07850 173 ------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 210 (353)
T ss_pred ------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHH
Confidence 00112568889999999998899999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhcc----------------------CC---------------CChh----hhccChhhHHH
Q 002736 266 FC---PFSTGEEKTRTMSSLRH----------------------RV---------------LPPQ----LLLKFPKEASF 301 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~----------------------~~---------------~~~~----~~~~~~~~~~l 301 (886)
++ ||............+.. .. .+.. .....+.+.+|
T Consensus 211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (353)
T cd07850 211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL 290 (353)
T ss_pred HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence 98 66443321111111000 00 0000 00123346799
Q ss_pred HHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 302 CLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 302 i~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
|.+||..||.+|||+.|+|+||||+.
T Consensus 291 i~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 291 LSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHcCCChhhCcCHHHHhcChhHhh
Confidence 99999999999999999999998864
No 276
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94 E-value=8.4e-27 Score=261.61 Aligned_cols=194 Identities=14% Similarity=0.178 Sum_probs=148.3
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC--------------------------------------
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------------------- 76 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-------------------------------------- 76 (886)
+|+|++..++ +|.+ .+..+++||| .|++|.++|.+..
T Consensus 97 ~HpnIv~l~~-~~~~---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 172 (375)
T cd05104 97 NHINIVNLLG-ACTV---GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMK 172 (375)
T ss_pred CCcceeeeee-eecc---CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcC
Confidence 7889888777 5543 4567888999 8999999985321
Q ss_pred ------------------------------------CCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCc
Q 002736 77 ------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH 120 (886)
Q Consensus 77 ------------------------------------~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~ 120 (886)
..+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~ 252 (375)
T cd05104 173 PGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRI 252 (375)
T ss_pred CCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCc
Confidence 24678899999999999999999999999999999999999999
Q ss_pred eeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccc
Q 002736 121 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLV 200 (886)
Q Consensus 121 vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (886)
+|++|||+++.........
T Consensus 253 ~kl~DfG~a~~~~~~~~~~------------------------------------------------------------- 271 (375)
T cd05104 253 TKICDFGLARDIRNDSNYV------------------------------------------------------------- 271 (375)
T ss_pred EEEecCccceeccCccccc-------------------------------------------------------------
Confidence 9999999986432110000
Q ss_pred cCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhh
Q 002736 201 EGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKT 276 (886)
Q Consensus 201 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~ 276 (886)
......++..|+|||.+.+..++.++|||||||++|||++ ||.......
T Consensus 272 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~ 324 (375)
T cd05104 272 ---------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS 324 (375)
T ss_pred ---------------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence 0000134567999999999889999999999999999996 665444333
Q ss_pred HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 277 RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
.....+.....+..+...++++.+|+.+||+.||++||++.|+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 325 KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 344444443333333334567889999999999999999999986
No 277
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=3.7e-27 Score=256.25 Aligned_cols=205 Identities=15% Similarity=0.182 Sum_probs=157.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .|++|.+++.+ ..+++.++..++.||+.||.|||+.||+||||
T Consensus 68 ~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL 141 (297)
T cd06656 68 LVMRENKNPNIVNYLD-SYL---VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDI 141 (297)
T ss_pred HHHHhCCCCCEeeEEE-EEe---cCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 3455578888888776 333 34578899999 89999999954 35789999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.++++|||++........
T Consensus 142 ~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--------------------------------------------------- 170 (297)
T cd06656 142 KSDNILLGMDGSVKLTDFGFCAQITPEQS--------------------------------------------------- 170 (297)
T ss_pred CHHHEEECCCCCEEECcCccceEccCCcc---------------------------------------------------
Confidence 99999999999999999998843211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 171 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg 211 (297)
T cd06656 171 ---------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211 (297)
T ss_pred ---------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 0011267889999999998889999999999999999999
Q ss_pred --CCCCCchhhHHhHhhccCCCC-hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
||..................+ .......+.+.+|+.+||..+|.+||++.++++||||.....
T Consensus 212 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 212 EPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred CCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 775544333222222211111 122334566789999999999999999999999999986543
No 278
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.94 E-value=1.8e-27 Score=253.16 Aligned_cols=201 Identities=25% Similarity=0.372 Sum_probs=151.4
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+.+..|++++..+. +..+ ...++++||+ .+++|.++|. ....+++.++..++.||++||.+||++||+|+||
T Consensus 50 ~~~~~l~~~~i~~~~~-~~~~---~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~di 124 (260)
T PF00069_consen 50 KILRRLRHPNIVQILD-VFQD---DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDI 124 (260)
T ss_dssp HHHHHHTBTTBCHEEE-EEEE---SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSB
T ss_pred hccccccccccccccc-cccc---ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence 3444457888877655 4433 5677899999 5569999997 3367899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||.+........
T Consensus 125 kp~NIl~~~~~~~~l~Dfg~~~~~~~~~~--------------------------------------------------- 153 (260)
T PF00069_consen 125 KPENILLDENGEVKLIDFGSSVKLSENNE--------------------------------------------------- 153 (260)
T ss_dssp SGGGEEESTTSEEEESSGTTTEESTSTTS---------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc---------------------------------------------------
Confidence 99999999999999999999843200000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-CCCCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......+++.|+|||++. +..++.++||||||+++|+|++
T Consensus 154 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 194 (260)
T PF00069_consen 154 ---------------------------------------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLT 194 (260)
T ss_dssp ---------------------------------------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------ccccccccccccccccccccccccccccccccccccccccc
Confidence 011126789999999998 7779999999999999999999
Q ss_pred ---CCCCCc--hhhHHhHhhccCCCChhhh---ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGE--EKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||.... ..............+.... ...+.+.+++.+||+.||++||++.++++||||
T Consensus 195 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 195 GKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp SSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 675541 1222222222111111111 112678899999999999999999999999997
No 279
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.3e-25 Score=233.33 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=207.0
Q ss_pred CCCEEEEEEcC-------CCCEEEEEeCCCcEEEEEcCcccCcccccccceEE-------------------ecCCCCee
Q 002736 568 SNLVCSLSFDR-------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-------------------MASRSKLS 621 (886)
Q Consensus 568 ~~~V~sl~f~~-------d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~-------------------~~~~~~I~ 621 (886)
.....|++|.. -|+++|.|+.+..|-|||+.-. +...|... .+|...|.
T Consensus 173 pafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~-----d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl 247 (463)
T KOG0270|consen 173 PAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIV-----DAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVL 247 (463)
T ss_pred cCcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccc-----cccccceeechhhhhhhhhhcccccccccchHHHH
Confidence 34446777753 3679999999999999998642 11222222 24788899
Q ss_pred eEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCc
Q 002736 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGV 701 (886)
Q Consensus 622 ~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~ 701 (886)
.++||....+.|||||.|.+|++||+.++++...+..|.+.|.++.|+|..+..|++|+.|++|.|.|.|.. ..
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~------~~ 321 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP------SN 321 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCc------cc
Confidence 999999889999999999999999999999999999999999999999999999999999999999999963 33
Q ss_pred eeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec--CCCEEEEEECCCcEEEE
Q 002736 702 SIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLW 779 (886)
Q Consensus 702 ~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~Dg~i~lw 779 (886)
.-...+..+.|-.|+|+|.+.+.+++++.||+|+.+|+|+...|+.+++.|...|++++++ ...+|+|+|.|+++++|
T Consensus 322 s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw 401 (463)
T KOG0270|consen 322 SGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLW 401 (463)
T ss_pred cCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEE
Confidence 3345566788999999999889999999999999999999988999999999999999996 67799999999999999
Q ss_pred eCCCCCccccCCCceEeecCCCceeEEEEecCCC-EEEEEcCCCcEEEEecCCCCcce
Q 002736 780 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPAL 836 (886)
Q Consensus 780 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~lasgs~Dg~v~iwd~~~~~~~~ 836 (886)
++.....+.... +.+. -+...|.++.|+-. ++|.|+..+.++|||+.+..++.
T Consensus 402 ~~~~~~~~~v~~--~~~~--~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 402 KFDVDSPKSVKE--HSFK--LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred eecCCCCccccc--cccc--ccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 998764421111 1111 12245666777654 78888888999999998876553
No 280
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.6e-26 Score=249.89 Aligned_cols=205 Identities=14% Similarity=0.165 Sum_probs=156.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC--CCCcChHHHHHHHHHHHHHHHhhcc-cCeeec
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS-QGIVVH 106 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHr 106 (886)
.+...+|++++.+++ .+. ..+.++++||| .|++|.+++... ...+++..++.++.||+.||.|||+ .||+||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~ 127 (286)
T cd06622 52 ILHKAVSPYIVDFYG-AFF---IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHR 127 (286)
T ss_pred HHHhcCCCcHHhhhh-hee---cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeC
Confidence 345567888888777 333 35678899999 788999988653 2478999999999999999999997 599999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++.++.+|++|||++.......
T Consensus 128 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 157 (286)
T cd06622 128 DVKPTNVLVNGNGQVKLCDFGVSGNLVASL-------------------------------------------------- 157 (286)
T ss_pred CCCHHHEEECCCCCEEEeecCCcccccCCc--------------------------------------------------
Confidence 999999999999999999999885331110
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC------CCCcccccchHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGV 260 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~s~~sDIwSlGv 260 (886)
.....|++.|+|||.+.+. .++.++|||||||
T Consensus 158 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~ 195 (286)
T cd06622 158 ------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGL 195 (286)
T ss_pred ------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHH
Confidence 0011567789999998553 3588999999999
Q ss_pred HHHHHhc---CCCCCchhh--HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 261 LLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 261 il~eLl~---pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
++|||++ ||....... ..+..+.....+..+....+.+.+|+.+||..+|.+||++.++++||||......
T Consensus 196 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 196 SILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred HHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 9999999 774433222 1222233333344444566788899999999999999999999999999876543
No 281
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94 E-value=6.9e-27 Score=248.24 Aligned_cols=201 Identities=20% Similarity=0.254 Sum_probs=158.3
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+.+.+|++++..++ ++. ..+.++++||| .|++|.+++.+. ...+++.++..++.|++.||.|||++||+|+|
T Consensus 51 ~~l~~~~h~~i~~~~~-~~~---~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 126 (256)
T cd08221 51 VILSLLQHPNIIAYYN-HFM---DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD 126 (256)
T ss_pred HHHHhCCCCCeeEEEe-EEe---cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 3455667888888776 333 34678889999 789999999654 45689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.+|++|||++........
T Consensus 127 l~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-------------------------------------------------- 156 (256)
T cd08221 127 IKTLNIFLTKAGLIKLGDFGISKILGSEYS-------------------------------------------------- 156 (256)
T ss_pred CChHhEEEeCCCCEEECcCcceEEcccccc--------------------------------------------------
Confidence 999999999999999999998854321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08221 157 ----------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT 196 (256)
T ss_pred ----------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHH
Confidence 0011267889999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||..... ......+....+++.....+.++.+++.+||.++|.+||++.++++|+|+
T Consensus 197 g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 197 LKRTFDATNP-LNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred CCCCCCCCCH-HHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 6644333 33333333443444444556788899999999999999999999999986
No 282
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=8.2e-27 Score=247.76 Aligned_cols=200 Identities=22% Similarity=0.201 Sum_probs=156.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .|++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||
T Consensus 54 ~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 128 (258)
T cd06632 54 ALLSKLQHPNIVQYLG-TER---EEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDI 128 (258)
T ss_pred HHHHhcCCCCchheee-eEe---cCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 3455668888888776 443 34678899999 788999999654 46899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
+|+||+++.++.+|++|||++.......
T Consensus 129 ~~~ni~~~~~~~~kl~d~~~~~~~~~~~---------------------------------------------------- 156 (258)
T cd06632 129 KGANILVDTNGVVKLADFGMAKQVVEFS---------------------------------------------------- 156 (258)
T ss_pred CHHHEEECCCCCEEEccCccceeccccc----------------------------------------------------
Confidence 9999999999999999999885432110
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~ 267 (886)
......|+..|+|||.+.... ++.++|+|||||++|+|++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~ 197 (258)
T cd06632 157 ---------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT 197 (258)
T ss_pred ---------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHh
Confidence 000125788899999997766 8999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||..................+.......+.+.+++.+||..+|.+||++.+++.|||+
T Consensus 198 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 198 GKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 7755543333333222233333334456788899999999999999999999999996
No 283
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=1.5e-26 Score=245.51 Aligned_cols=199 Identities=21% Similarity=0.283 Sum_probs=155.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++.++ ..+.++++||| .|++|.+++.+. ...+++..++.++.||+.+|.|||++||+|+||
T Consensus 52 ~l~~~~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl 127 (256)
T cd08220 52 VLKLLSHPNIIEYYENFL----EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL 127 (256)
T ss_pred HHhhCCCCchhheeeeEe----cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 444567888888776222 34678899999 788999999653 345899999999999999999999999999999
Q ss_pred CCcceeeccCC-ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 109 RPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 109 kP~NIll~~~~-~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
||+||+++.++ .+|++|||.+.......
T Consensus 128 ~~~nil~~~~~~~~~l~d~~~~~~~~~~~--------------------------------------------------- 156 (256)
T cd08220 128 KTQNILLDKHKMVVKIGDFGISKILSSKS--------------------------------------------------- 156 (256)
T ss_pred CHHHEEEcCCCCEEEEccCCCceecCCCc---------------------------------------------------
Confidence 99999998554 57999999985432110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 157 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~ 196 (256)
T cd08220 157 ----------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELAS 196 (256)
T ss_pred ----------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHh
Confidence 0001257888999999998889999999999999999998
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||.............. ....+.....++.+.+++.+||..+|.+|||+.|+++||||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 197 LKRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 7755554444433333 22333334466788999999999999999999999999996
No 284
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=1.2e-26 Score=247.37 Aligned_cols=203 Identities=20% Similarity=0.277 Sum_probs=159.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---CCCcChHHHHHHHHHHHHHHHhhc-----c
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH-----S 100 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lH-----s 100 (886)
..+...+|++++..++ .+.. .....++++||| .+++|.+++... ...+++.+++.++.||+.||.||| +
T Consensus 51 ~~l~~l~~~~i~~~~~-~~~~-~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~ 128 (265)
T cd08217 51 NILRELKHPNIVRYYD-RIID-RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG 128 (265)
T ss_pred HHHHhcCCCccceeee-eeec-CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3455567888888766 3322 234557889998 788999998542 467899999999999999999999 9
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
.+|+|+||||+||+++.++.+|++|||++........
T Consensus 129 ~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~------------------------------------------- 165 (265)
T cd08217 129 NTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS------------------------------------------- 165 (265)
T ss_pred CcceecCCCHHHEEEecCCCEEEecccccccccCCcc-------------------------------------------
Confidence 9999999999999999999999999999865422110
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
......|++.|+|||.+.+..++.++|||||||
T Consensus 166 -----------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~ 198 (265)
T cd08217 166 -----------------------------------------------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGC 198 (265)
T ss_pred -----------------------------------------------cccccccCCCccChhhhcCCCCCchhHHHHHHH
Confidence 001126788999999999888999999999999
Q ss_pred HHHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 261 il~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
++|+|++ ||.... .......+.....+.......+.+.+++.+||..+|.+||++.++++|||+
T Consensus 199 il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 199 LIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 9999998 665443 333334444444444444566788899999999999999999999999996
No 285
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94 E-value=1e-26 Score=254.13 Aligned_cols=201 Identities=20% Similarity=0.205 Sum_probs=153.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrD 107 (886)
..+.+.+|++++..++ ++. ..+.++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||+ +||+|||
T Consensus 51 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~d 125 (308)
T cd06615 51 KVLHECNSPYIVGFYG-AFY---SDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRD 125 (308)
T ss_pred HHHHhCCCCCCCeEEE-EEe---eCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECC
Confidence 3455568888888776 443 34678999999 788999999654 578999999999999999999998 5999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+|||++.++.+|++|||++......
T Consensus 126 l~p~nil~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------- 153 (308)
T cd06615 126 VKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------------- 153 (308)
T ss_pred CChHHEEEecCCcEEEccCCCccccccc----------------------------------------------------
Confidence 9999999999999999999987432100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
.....+|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 154 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 193 (308)
T cd06615 154 ----------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAI 193 (308)
T ss_pred ----------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHh
Confidence 0001267889999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCC-----------------------------------CChhh--hccChhhHHHHHHccC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRV-----------------------------------LPPQL--LLKFPKEASFCLWLLH 307 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~-----------------------------------~~~~~--~~~~~~~~~li~~~L~ 307 (886)
||..... ......+.... .++.. ....+.+.+|+.+||.
T Consensus 194 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 272 (308)
T cd06615 194 GRYPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLK 272 (308)
T ss_pred CCCCCCCcch-hhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHcc
Confidence 6643321 11111111000 00000 1134568899999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCC
Q 002736 308 PEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 308 ~dP~~Rps~~eil~h~~~~~~ 328 (886)
.+|++||++.++++||||...
T Consensus 273 ~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 273 KNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CChhhCcCHHHHhcChhhhhc
Confidence 999999999999999999764
No 286
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94 E-value=1.1e-26 Score=256.72 Aligned_cols=196 Identities=18% Similarity=0.240 Sum_probs=149.0
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC--------------------------------------
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------------------- 76 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-------------------------------------- 76 (886)
+|++++..++ .|.. ....++++||| .+++|.++|....
T Consensus 69 ~h~niv~~~~-~~~~--~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
T cd05054 69 HHLNVVNLLG-ACTK--PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASS 145 (337)
T ss_pred cCcchhheee-eEec--CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccc
Confidence 6888887766 5543 34578888999 8899999984321
Q ss_pred ----------------------CCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCC
Q 002736 77 ----------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (886)
Q Consensus 77 ----------------------~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~ 134 (886)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++++|||++.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~ 225 (337)
T cd05054 146 GFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 225 (337)
T ss_pred ccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhccc
Confidence 2578899999999999999999999999999999999999999999999999864421
Q ss_pred CccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccccc
Q 002736 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (886)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (886)
....
T Consensus 226 ~~~~---------------------------------------------------------------------------- 229 (337)
T cd05054 226 DPDY---------------------------------------------------------------------------- 229 (337)
T ss_pred Ccch----------------------------------------------------------------------------
Confidence 1000
Q ss_pred cccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChh
Q 002736 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290 (886)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~ 290 (886)
.......++..|+|||.+.+..++.++|||||||+||||++ ||............+.....+..
T Consensus 230 ------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 297 (337)
T cd05054 230 ------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA 297 (337)
T ss_pred ------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC
Confidence 00001244667999999999999999999999999999986 66443333333333433333333
Q ss_pred hhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
.....+++.+++.+||+.+|++||++.|++++
T Consensus 298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 34456788999999999999999999999873
No 287
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.8e-27 Score=240.77 Aligned_cols=186 Identities=19% Similarity=0.310 Sum_probs=154.0
Q ss_pred ccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccC
Q 002736 52 AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 130 (886)
Q Consensus 52 ~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~ 130 (886)
...|.+|.+||| .||+|.-.|.+- +++-+..+..|+..|+-||=|||++|||.||||.+||||+..|+|||+|||+|+
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccc
Confidence 467889999999 999999888554 688999999999999999999999999999999999999999999999999995
Q ss_pred CCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccc
Q 002736 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (886)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (886)
.-..+.
T Consensus 499 Eni~~~-------------------------------------------------------------------------- 504 (683)
T KOG0696|consen 499 ENIFDG-------------------------------------------------------------------------- 504 (683)
T ss_pred ccccCC--------------------------------------------------------------------------
Confidence 421110
Q ss_pred cccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCC
Q 002736 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL 287 (886)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~ 287 (886)
..+.+.+|||-|+|||++...+|+.++|+||+||+|||||. ||.+..+......+..+...
T Consensus 505 ----------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs 568 (683)
T KOG0696|consen 505 ----------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS 568 (683)
T ss_pred ----------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc
Confidence 02335699999999999999999999999999999999999 77666555555555555544
Q ss_pred ChhhhccChhhHHHHHHccCCCCCCCCCH-----HHHhcCCCCCCCcC
Q 002736 288 PPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPRD 330 (886)
Q Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~eil~h~~~~~~~~ 330 (886)
.|. ..+.++.+++..+|.+.|.+|..+ .+|-.||||+....
T Consensus 569 yPK--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 569 YPK--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred Ccc--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 333 344778899999999999999653 67889999987654
No 288
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=6.2e-27 Score=259.02 Aligned_cols=214 Identities=15% Similarity=0.194 Sum_probs=156.4
Q ss_pred eeecccccccCCCCCCcccccc-ccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ ++..+ .....++++|||.+++|.+++... ..+++.+++.++.||+.||.|||++||+||||
T Consensus 56 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl 133 (334)
T cd07855 56 KILRHFKHDNIIAIRD-ILRPPGADFKDVYVVMDLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDL 133 (334)
T ss_pred HHHHhcCCCCccCHHH-hccccCCCCceEEEEEehhhhhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 3445556888877665 44322 234568999999888999999654 56899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++.........
T Consensus 134 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------------- 163 (334)
T cd07855 134 KPSNLLVNEDCELRIGDFGMARGLSSSPTE-------------------------------------------------- 163 (334)
T ss_pred CHHHEEEcCCCcEEecccccceeecccCcC--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~ 267 (886)
........+|+.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~ 207 (334)
T cd07855 164 ------------------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG 207 (334)
T ss_pred ------------------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc
Confidence 0000112378899999999866 458999999999999999998
Q ss_pred ---CCCCCchhhHHhHhhcc-------------------------C-CCC----hhhhccChhhHHHHHHccCCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRH-------------------------R-VLP----PQLLLKFPKEASFCLWLLHPEPSGRP 314 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~-------------------------~-~~~----~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (886)
||...... ..+..+.. . ..+ ......++.+.++|.+||+.+|.+||
T Consensus 208 g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 286 (334)
T cd07855 208 RRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI 286 (334)
T ss_pred CCCccCCCChH-HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCc
Confidence 66433221 11111000 0 000 01123457788999999999999999
Q ss_pred CHHHHhcCCCCCCCcCch
Q 002736 315 KMGELLQSEFLNEPRDSM 332 (886)
Q Consensus 315 s~~eil~h~~~~~~~~~~ 332 (886)
++.++++||||.....+.
T Consensus 287 t~~~~l~~~~~~~~~~~~ 304 (334)
T cd07855 287 TVEQALQHPFLAQYHDPD 304 (334)
T ss_pred CHHHHHhChhhhhccCCc
Confidence 999999999998665443
No 289
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.94 E-value=9e-27 Score=249.87 Aligned_cols=198 Identities=17% Similarity=0.183 Sum_probs=149.6
Q ss_pred ccccCCCCCCccccccc---cCCceEEEEee-CCcchhhhhcCC---CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 36 DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~---~~~~~~i~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
+|++++..++ .+.+.. ..+.++++||| .+++|.+++... ...+++..++.++.||+.||.|||++||+|+||
T Consensus 61 ~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l 139 (275)
T cd06608 61 NHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDI 139 (275)
T ss_pred CCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 6888888776 443332 24568899999 778999988542 357899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
+|+||+++.++.++++|||++........
T Consensus 140 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 168 (275)
T cd06608 140 KGQNILLTKNAEVKLVDFGVSAQLDSTLG--------------------------------------------------- 168 (275)
T ss_pred CHHHEEEccCCeEEECCCccceecccchh---------------------------------------------------
Confidence 99999999999999999998853311100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-----CCCCcccccchHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLF 263 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDIwSlGvil~ 263 (886)
......|+..|+|||.+.. ..++.++|||||||+||
T Consensus 169 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 169 ---------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred ---------------------------------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 0011257888999998754 23788999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhhccCCCChh--hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||++ ||.............. ...+.. .......+.+|+.+||..||++|||+.++++|||+
T Consensus 210 ~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 210 ELADGKPPLCDMHPMRALFKIPR-NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHhCCCCccccchHHHHHHhhc-cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999 7754433333333222 222111 11234577899999999999999999999999996
No 290
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.94 E-value=1.6e-26 Score=250.46 Aligned_cols=199 Identities=14% Similarity=0.141 Sum_probs=149.5
Q ss_pred ccccCCCCCCccccccc--cCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 36 DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~--~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
+|++++..++ ++.... ..+.++++||| .|++|.++++. ....+++..++.++.||+.||.|||++||+|||||
T Consensus 77 ~h~ni~~~~~-~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk 155 (291)
T cd06639 77 NHPNVVKFYG-MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVK 155 (291)
T ss_pred CCCCeEEEEE-EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 6788877666 443222 23568899999 78899998852 34568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++........
T Consensus 156 p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 183 (291)
T cd06639 156 GNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------------- 183 (291)
T ss_pred HHHEEEcCCCCEEEeecccchhcccccc----------------------------------------------------
Confidence 9999999999999999999854321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-----CCCcccccchHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLLFE 264 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDIwSlGvil~e 264 (886)
......|+..|+|||.+... .++.++|||||||++||
T Consensus 184 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~e 225 (291)
T cd06639 184 --------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIE 225 (291)
T ss_pred --------------------------------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHH
Confidence 00012568889999998643 26889999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCCh--hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
|++ ||........... +.....+. ........+.+|+.+||..+|.+||++.|+++||||+
T Consensus 226 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 226 LGDGDPPLFDMHPVKTLFK-IPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HhhCCCCCCCCcHHHHHHH-HhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 998 6655443333332 22222211 1223445678999999999999999999999999984
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94 E-value=1.6e-26 Score=249.47 Aligned_cols=202 Identities=18% Similarity=0.166 Sum_probs=153.9
Q ss_pred cccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhccc-Ceeeccc
Q 002736 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNV 108 (886)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~-giiHrDl 108 (886)
...+|++++.+++ .+. ..+.++++|||.+++|.+++.. ....+++..++.++.||+.||.|||++ +|+||||
T Consensus 55 ~~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dl 130 (283)
T cd06617 55 RSVDCPYTVTFYG-ALF---REGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDV 130 (283)
T ss_pred HHcCCCCeeeeeE-EEe---cCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence 3467888888777 443 3456899999988888887743 335689999999999999999999998 9999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+||+|||++.......
T Consensus 131 kp~nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 158 (283)
T cd06617 131 KPSNVLINRNGQVKLCDFGISGYLVDSV---------------------------------------------------- 158 (283)
T ss_pred CHHHEEECCCCCEEEeeccccccccccc----------------------------------------------------
Confidence 9999999999999999999985331110
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC----CCCCcccccchHHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLLFE 264 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~~sDIwSlGvil~e 264 (886)
..+...|+..|+|||.+.+ ..++.++|||||||++||
T Consensus 159 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~ 199 (283)
T cd06617 159 ---------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE 199 (283)
T ss_pred ---------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence 0011256888999998865 347899999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCChhhh-ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
|++ ||..................+..+. ..+..+.+|+.+||..+|.+||++.++++||||....
T Consensus 200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 999 7754333323333333322222222 2456788999999999999999999999999998754
No 292
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94 E-value=4.9e-27 Score=260.10 Aligned_cols=212 Identities=17% Similarity=0.224 Sum_probs=155.9
Q ss_pred CceeecccccccCCCCCCccccccc--cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
+...+...+|++++.+++ ++.... .....|++|||.+++|.+++.+. +.+++..++.++.||+.||.|||++||+|
T Consensus 54 E~~~l~~l~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H 131 (337)
T cd07858 54 EIKLLRHLDHENVIAIKD-IMPPPHREAFNDVYIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLH 131 (337)
T ss_pred HHHHHHhcCCCCccchHH-heecccccccCcEEEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 334455668898888766 443321 22457999999889999999654 57899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+||+++.++.+|++|||++........
T Consensus 132 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------ 163 (337)
T cd07858 132 RDLKPSNLLLNANCDLKICDFGLARTTSEKGD------------------------------------------------ 163 (337)
T ss_pred CCCCHHHEEEcCCCCEEECcCccccccCCCcc------------------------------------------------
Confidence 99999999999999999999999854311100
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~e 264 (886)
......++.+|+|||.+.+ ..++.++|||||||++|+
T Consensus 164 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 201 (337)
T cd07858 164 ------------------------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE 201 (337)
T ss_pred ------------------------------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHH
Confidence 0011256889999998865 458999999999999999
Q ss_pred Hhc---CCCCCchhhHH--hHhh------------------------ccCCC---ChhhhccChhhHHHHHHccCCCCCC
Q 002736 265 LFC---PFSTGEEKTRT--MSSL------------------------RHRVL---PPQLLLKFPKEASFCLWLLHPEPSG 312 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~--~~~~------------------------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~ 312 (886)
|++ ||...+..... .... ..... .......++.+.+|+.+||+.+|++
T Consensus 202 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 281 (337)
T cd07858 202 LLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSK 281 (337)
T ss_pred HHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhh
Confidence 998 55332211000 0000 00000 0112345677889999999999999
Q ss_pred CCCHHHHhcCCCCCCCcCc
Q 002736 313 RPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 313 Rps~~eil~h~~~~~~~~~ 331 (886)
|||+.++++||||.....+
T Consensus 282 Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 282 RITVEEALAHPYLASLHDP 300 (337)
T ss_pred ccCHHHHHcCcchhhhcCc
Confidence 9999999999999865433
No 293
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=3.4e-26 Score=266.82 Aligned_cols=189 Identities=17% Similarity=0.226 Sum_probs=130.6
Q ss_pred cCCceEEEEee-CCcchhhhhcCCCCCc-------------------ChHHHHHHHHHHHHHHHhhcccCeeecccCCcc
Q 002736 53 AIDPFVHAIEW-GDVSLRQWLDKPKRSV-------------------DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (886)
Q Consensus 53 ~~~~~~i~~e~-~g~sL~~~l~~~~~~l-------------------~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~N 112 (886)
..+.++++||| .+++|.+++....... ....+..|+.||+.||.|||++||+||||||+|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 45678999999 7889999985432111 234567899999999999999999999999999
Q ss_pred eeecc-CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCC
Q 002736 113 FVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (886)
Q Consensus 113 Ill~~-~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (886)
||++. .+.+||+|||+++.......
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~------------------------------------------------------ 311 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGIN------------------------------------------------------ 311 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccc------------------------------------------------------
Confidence 99985 57899999999964321100
Q ss_pred ccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC----------------------C
Q 002736 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------V 249 (886)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----------------------~ 249 (886)
......++++.|+|||.+.... +
T Consensus 312 -----------------------------------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 312 -----------------------------------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred -----------------------------------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 0011237788999999664322 3
Q ss_pred CcccccchHHHHHHHHhcCCCCCchh-hHHhHhhccCCC-------------Chhhh-------ccChhhHHHHHHccCC
Q 002736 250 SCASDIYRLGVLLFELFCPFSTGEEK-TRTMSSLRHRVL-------------PPQLL-------LKFPKEASFCLWLLHP 308 (886)
Q Consensus 250 s~~sDIwSlGvil~eLl~pf~~~~~~-~~~~~~~~~~~~-------------~~~~~-------~~~~~~~~li~~~L~~ 308 (886)
+.++|||||||+||||++|....... ......+..... .+... .......+||.+||.+
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 45679999999999999944333222 222222111100 00000 0112234899999999
Q ss_pred CCCCCCCHHHHhcCCCCCCCcC
Q 002736 309 EPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 309 dP~~Rps~~eil~h~~~~~~~~ 330 (886)
||.+|||+.|+|+||||.....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999987543
No 294
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.94 E-value=1.5e-26 Score=247.53 Aligned_cols=202 Identities=19% Similarity=0.198 Sum_probs=152.3
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCc--ChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l--~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
..+....|++++..++ ++. ..+.+++++|| .|++|.+++......+ ++..+..++.||+.||.|||++||+||
T Consensus 57 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~ 132 (268)
T cd06624 57 ALHSYLKHRNIVQYLG-SDS---ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHR 132 (268)
T ss_pred HHHHhcCCCCeeeeee-eec---cCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 3445568888888776 443 34678899998 7899999996543445 889999999999999999999999999
Q ss_pred ccCCcceeecc-CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 107 NVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 107 DlkP~NIll~~-~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
||||+||+++. .+.++++|||++........
T Consensus 133 dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 164 (268)
T cd06624 133 DIKGDNVLVNTYSGVVKISDFGTSKRLAGINP------------------------------------------------ 164 (268)
T ss_pred CCCHHHEEEcCCCCeEEEecchhheecccCCC------------------------------------------------
Confidence 99999999975 67899999998854321100
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC--CCcccccchHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 263 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDIwSlGvil~ 263 (886)
......|++.|+|||.+.+.. ++.++|||||||++|
T Consensus 165 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~ 202 (268)
T cd06624 165 ------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIV 202 (268)
T ss_pred ------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHH
Confidence 000124678899999987644 789999999999999
Q ss_pred HHhc---CCCCCchhhHHhHhh-ccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
+|++ ||.........+... .....+.......+++.+|+.+||..+|.+|||+.|++.||||
T Consensus 203 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 203 EMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999 665433222222221 1122233333456778899999999999999999999999997
No 295
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.4e-24 Score=216.53 Aligned_cols=243 Identities=17% Similarity=0.296 Sum_probs=203.2
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCC-CCCeEEEecCCCc
Q 002736 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGV 641 (886)
Q Consensus 563 ~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~-~~~~las~s~Dg~ 641 (886)
.+..|.++|++++.+ +.++|+||.|-+|+|||+.... ..-....|.+.|+++.|.+. +.+.|+||+.||.
T Consensus 38 ~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~-------qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~ 108 (362)
T KOG0294|consen 38 AFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK-------QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH 108 (362)
T ss_pred cccccccceeEEEec--ceeEeccCCCCcEEEEeccchh-------hhcceeccccceEEEEecCCcchhheeeecCCCc
Confidence 446799999999987 6899999999999999998631 12233468899999999763 3458999999999
Q ss_pred EEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCC
Q 002736 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDS 721 (886)
Q Consensus 642 V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 721 (886)
|.+|++.....+..+++|.+.|+.++++| .+.+.++.+.|+.+++||+-. +..-...+.+.....|.|+|.
T Consensus 109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~-------Gr~a~v~~L~~~at~v~w~~~- 179 (362)
T KOG0294|consen 109 IIIWRVGSWELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRTWNLVR-------GRVAFVLNLKNKATLVSWSPQ- 179 (362)
T ss_pred EEEEEcCCeEEeeeecccccccceeEecC-CCceEEEEcCCceeeeehhhc-------CccceeeccCCcceeeEEcCC-
Confidence 99999999999999999999999999999 889999999999999999988 554444555555566999999
Q ss_pred CcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCC
Q 002736 722 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 801 (886)
Q Consensus 722 ~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~ 801 (886)
|.+|+.++.+ .|-+|.+.+.+. .........+.++.|.++.+|++|+.|+.|++||.... .|+..+.+|.+
T Consensus 180 Gd~F~v~~~~-~i~i~q~d~A~v--~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~------~~~~~~~AH~~ 250 (362)
T KOG0294|consen 180 GDHFVVSGRN-KIDIYQLDNASV--FREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSD------TPLTEFLAHEN 250 (362)
T ss_pred CCEEEEEecc-EEEEEecccHhH--hhhhhccccceeeeecCCceEEEecCCceEEEeccCCC------ccceeeecchh
Confidence 8888888765 588999887763 22222336688999999999999999999999999985 67899999999
Q ss_pred ceeEEEEe--cCCCEEEEEcCCCcEEEEecCCC
Q 002736 802 VKNFVGLS--VWDGYVATGSETNEVFVYHKAFP 832 (886)
Q Consensus 802 ~v~~v~~s--p~g~~lasgs~Dg~v~iwd~~~~ 832 (886)
.|..+.+- |++.||+|+|.||.|+|||+...
T Consensus 251 RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 251 RVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred heeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 99998743 55789999999999999999875
No 296
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.94 E-value=1.6e-26 Score=246.08 Aligned_cols=196 Identities=16% Similarity=0.240 Sum_probs=153.1
Q ss_pred cccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCc
Q 002736 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (886)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~ 111 (886)
...+|++++..++ ++. ..+.++++||| .|++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+
T Consensus 52 ~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~ 126 (260)
T cd05611 52 IQGESPYVAKLYY-SFQ---SKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPE 126 (260)
T ss_pred hcCCCCCeeeeee-eEE---cCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 3447888888776 443 34678899999 789999999654 56899999999999999999999999999999999
Q ss_pred ceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCC
Q 002736 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (886)
Q Consensus 112 NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (886)
||+++.++.++++|||++......
T Consensus 127 nil~~~~~~~~l~dfg~~~~~~~~-------------------------------------------------------- 150 (260)
T cd05611 127 NLLIDQTGHLKLTDFGLSRNGLEN-------------------------------------------------------- 150 (260)
T ss_pred HeEECCCCcEEEeecccceecccc--------------------------------------------------------
Confidence 999999999999999987432110
Q ss_pred ccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---C
Q 002736 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (886)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---p 268 (886)
....|+..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 151 --------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 151 --------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred --------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCC
Confidence 01256788999999988889999999999999999998 7
Q ss_pred CCCCchhhHHhHhhccCC--CCh-hhhccChhhHHHHHHccCCCCCCCCC---HHHHhcCCCCCCC
Q 002736 269 FSTGEEKTRTMSSLRHRV--LPP-QLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (886)
Q Consensus 269 f~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~li~~~L~~dP~~Rps---~~eil~h~~~~~~ 328 (886)
|...... .....+.... .++ .....++.+.+++.+||..+|.+||+ +.|++.||||...
T Consensus 193 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 193 FHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 7544333 2222222211 122 22245678889999999999999995 4799999999764
No 297
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=258.45 Aligned_cols=205 Identities=17% Similarity=0.202 Sum_probs=153.4
Q ss_pred cccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhc
Q 002736 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
..||.|+..+.- -.|.|++.|+| +|-. +.+.|+.-+ .|.+|..+|.-...+|.....+.|++||++|++|||
T Consensus 433 qaFKnEVa~lkk--TRH~NIlLFMG-~~~~----p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH 505 (678)
T KOG0193|consen 433 QAFKNEVAVLKK--TRHENILLFMG-ACMN----PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH 505 (678)
T ss_pred HHHHHHHHHHhh--cchhhheeeeh-hhcC----CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh
Confidence 456777655444 46888877777 6643 333555555 888999999766678999999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
.++|||||||..||+|.+++.|||+|||++.....-.-+ .
T Consensus 506 AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~--------------------------------~-------- 545 (678)
T KOG0193|consen 506 AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE--------------------------------Q-------- 545 (678)
T ss_pred hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc--------------------------------c--------
Confidence 999999999999999999999999999998532111000 0
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC---CCCCcccccc
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 256 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDIw 256 (886)
......|...|||||++.. .+|++.||||
T Consensus 546 ------------------------------------------------q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVY 577 (678)
T KOG0193|consen 546 ------------------------------------------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVY 577 (678)
T ss_pred ------------------------------------------------ccCCCccchhhhcHHHHhhcccCCCCcccchh
Confidence 0011156777999999964 4599999999
Q ss_pred hHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChh----hhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ----LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 257 SlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||||++|||+| ||. .+.....+..+-.+...+. ..++..++++|+..||.++|++||.+.+||.
T Consensus 578 aFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 578 AFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999999999 887 4444433333333322222 2234447889999999999999999999886
No 298
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=2.4e-26 Score=249.09 Aligned_cols=199 Identities=16% Similarity=0.125 Sum_probs=156.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. ..+.++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+|+||+
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~ 128 (290)
T cd05580 54 ILQSIRHPFLVNLYG-SFQ---DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLK 128 (290)
T ss_pred HHHhCCCCCccceee-EEE---cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence 445556888888776 332 34678899999 599999999665 578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++......
T Consensus 129 p~nili~~~~~~kl~dfg~~~~~~~~------------------------------------------------------ 154 (290)
T cd05580 129 PENLLLDSDGYIKITDFGFAKRVKGR------------------------------------------------------ 154 (290)
T ss_pred HHHEEECCCCCEEEeeCCCccccCCC------------------------------------------------------
Confidence 99999999999999999988543111
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 155 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 195 (290)
T cd05580 155 ---------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGY 195 (290)
T ss_pred ---------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 001257888999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
||.......... .+.... ++......+.+.+++.+||..+|.+|+ +++|+++||||....
T Consensus 196 ~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 196 PPFFDDNPIQIYE-KILEGK-VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred CCCCCCCHHHHHH-HHhcCC-ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 775544322222 222221 122233467888999999999999998 899999999997654
No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=3.6e-26 Score=250.99 Aligned_cols=202 Identities=16% Similarity=0.135 Sum_probs=156.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++..++ +|.+ .+.++++|||..++|.+++......+++.++..++.||+.||.|||++||+||||+
T Consensus 77 ~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~ 152 (317)
T cd06635 77 KFLQRIKHPNSIEYKG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK 152 (317)
T ss_pred HHHHhCCCCCEEEEEE-EEee---CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 3445567888888776 4443 45688999997789988886555678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++......
T Consensus 153 p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------------ 178 (317)
T cd06635 153 AGNILLTEPGQVKLADFGSASIASPA------------------------------------------------------ 178 (317)
T ss_pred cccEEECCCCCEEEecCCCccccCCc------------------------------------------------------
Confidence 99999999999999999987432110
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcccccchHHHHHHHHh
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDIwSlGvil~eLl 266 (886)
....|++.|+|||.+. +..++.++|||||||++|||+
T Consensus 179 ----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~ 218 (317)
T cd06635 179 ----------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 218 (317)
T ss_pred ----------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHH
Confidence 0125688899999974 345899999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
+ ||..................+.......+.+.+++.+||+.+|.+||++.++++|+|+....
T Consensus 219 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 219 ERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred hCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 8 77655443333333333322222233456788999999999999999999999999986543
No 300
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=2.3e-26 Score=245.39 Aligned_cols=196 Identities=19% Similarity=0.184 Sum_probs=151.1
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
+...+|++++..++ +|. ..+.++++||| .+++|.+++... ...+++..++.++.||+.||.|||++||+|||||
T Consensus 56 l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk 131 (263)
T cd05052 56 MKEIKHPNLVQLLG-VCT---REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 131 (263)
T ss_pred HHhCCCCChhheEE-EEc---CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence 33457888888776 443 34678899998 789999999543 3468999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++.........
T Consensus 132 p~nil~~~~~~~kl~df~~~~~~~~~~~~--------------------------------------------------- 160 (263)
T cd05052 132 ARNCLVGENHLVKVADFGLSRLMTGDTYT--------------------------------------------------- 160 (263)
T ss_pred cceEEEcCCCcEEeCCCccccccccceee---------------------------------------------------
Confidence 99999999999999999998543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 161 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 161 --------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred --------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence 0000123567999999988889999999999999999996
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.. .........+.....++.....++.+.+++.+||..+|++||++.++++
T Consensus 203 ~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 203 MSPYPG-IDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCCC-CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 5543 3333444444444444444556778899999999999999999999876
No 301
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=1.3e-26 Score=251.30 Aligned_cols=202 Identities=18% Similarity=0.260 Sum_probs=149.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++..++ ++. ..+.++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|+|||
T Consensus 55 ~~l~~l~h~ni~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk 130 (291)
T cd07870 55 SLLKGLKHANIVLLHD-IIH---TKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLK 130 (291)
T ss_pred HHHHhcCCCCEeEEEE-EEe---cCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 3455567888877666 333 345788999998889988886554567899999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||+++.......
T Consensus 131 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~---------------------------------------------------- 158 (291)
T cd07870 131 PQNLLISYLGELKLADFGLARAKSIPSQ---------------------------------------------------- 158 (291)
T ss_pred hHHEEEcCCCcEEEeccccccccCCCCC----------------------------------------------------
Confidence 9999999999999999999854321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~- 267 (886)
......+++.|+|||.+.+. .++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g 200 (291)
T cd07870 159 --------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQG 200 (291)
T ss_pred --------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhC
Confidence 00011568889999998764 47889999999999999999
Q ss_pred --CCCCCchhhHHhHhhcc---------------------C----CCChhh------hccChhhHHHHHHccCCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRH---------------------R----VLPPQL------LLKFPKEASFCLWLLHPEPSGRP 314 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---------------------~----~~~~~~------~~~~~~~~~li~~~L~~dP~~Rp 314 (886)
||............... . ..+... ....+.+.+++.+||..||++||
T Consensus 201 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~ 280 (291)
T cd07870 201 QPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRI 280 (291)
T ss_pred CCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCc
Confidence 66544332222111100 0 000000 11245677999999999999999
Q ss_pred CHHHHhcCCCC
Q 002736 315 KMGELLQSEFL 325 (886)
Q Consensus 315 s~~eil~h~~~ 325 (886)
|+.|++.||||
T Consensus 281 t~~~~l~h~~~ 291 (291)
T cd07870 281 SAQDALLHPYF 291 (291)
T ss_pred CHHHHhcCCCC
Confidence 99999999997
No 302
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=7.6e-25 Score=217.31 Aligned_cols=247 Identities=21% Similarity=0.307 Sum_probs=200.5
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCC-ceE-EEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQV-LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t-~~~-~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
.....|++|+|+|....+++.||+||+|++|+++. +.. .+....|.++|.+++|+. +++.+++|+.|+.+++||+.+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEEEccC
Confidence 35678999999998889999999999999999986 332 244567999999999995 999999999999999999998
Q ss_pred hhhhhccCceeeeeecCCCeEEEEEeCCCCc--EEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEecCCCEEEEE
Q 002736 693 AILLLHLGVSIGTIKTKANVCCVQFPLDSGR--SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSA 770 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~--~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~~~~~l~sg 770 (886)
++....-.|.++|.++.|-+. .. .|++||.|.+|++||.|... |+.++.-. ..|+++.. -..+++.|
T Consensus 104 -------~Q~~~v~~Hd~pvkt~~wv~~-~~~~cl~TGSWDKTlKfWD~R~~~-pv~t~~LP-eRvYa~Dv-~~pm~vVa 172 (347)
T KOG0647|consen 104 -------GQVSQVAAHDAPVKTCHWVPG-MNYQCLVTGSWDKTLKFWDTRSSN-PVATLQLP-ERVYAADV-LYPMAVVA 172 (347)
T ss_pred -------CCeeeeeecccceeEEEEecC-CCcceeEecccccceeecccCCCC-eeeeeecc-ceeeehhc-cCceeEEE
Confidence 666666667889999999776 44 89999999999999999876 57777643 34666554 34577888
Q ss_pred ECCCcEEEEeCCCCCccccCCCceEeecC----CCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCC
Q 002736 771 STDNTLKLWDLSMCTSRVIDTPLHSFTGH----TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL 846 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~~~~~~~~~~~~h----~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~ 846 (886)
..+..|.+|+++.+. ..++.+ .-.++||++.++.+-.|.||-.|.+.|.++..+.+...|.|.+....
T Consensus 173 ta~r~i~vynL~n~~--------te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~ 244 (347)
T KOG0647|consen 173 TAERHIAVYNLENPP--------TEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRST 244 (347)
T ss_pred ecCCcEEEEEcCCCc--------chhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccC
Confidence 899999999998653 222223 23488999999988889999999999999999887777877765421
Q ss_pred CCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 847 SGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 847 ~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
-+ ..+.-..|++|+|+|.-. .|+|+|+||++.+||
T Consensus 245 ~~--~~~~VYaVNsi~FhP~hg-tlvTaGsDGtf~FWD 279 (347)
T KOG0647|consen 245 NS--VNDDVYAVNSIAFHPVHG-TLVTAGSDGTFSFWD 279 (347)
T ss_pred CC--CCCceEEecceEeecccc-eEEEecCCceEEEec
Confidence 11 223456799999999888 999999999999997
No 303
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=8e-24 Score=201.11 Aligned_cols=291 Identities=18% Similarity=0.276 Sum_probs=225.1
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccC---cccccccc-eEE----ecCCCCeeeEEEeCCCCCeEEEecC
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN---ENRDIHYP-VVE----MASRSKLSSICWNSYIKSQIASSNF 638 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~---~~~~~~~~-~~~----~~~~~~I~~l~~~~~~~~~las~s~ 638 (886)
.+..|++++|+|.|.+.|.|+..++++|..+..... .++...+| .+. -.|++.|.|++|+| .+++||+|+.
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~-~geliatgsn 109 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP-CGELIATGSN 109 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC-ccCeEEecCC
Confidence 467899999999999999999999999987655322 22222333 222 24888999999999 7999999999
Q ss_pred CCcEEEEECCCc--eE---EEEecccCCcEEEEEEcc---CCCCEEEEEe-CCCcEEEEeCchhhhhhccCceeeeeec-
Q 002736 639 EGVVQVWDVSRS--QV---LTEMREHERRVWSIDFSS---ADPTLLASGS-DDGSVKLWSINQAILLLHLGVSIGTIKT- 708 (886)
Q Consensus 639 Dg~V~iWd~~t~--~~---~~~~~~h~~~v~~v~~~p---~~~~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~~~~~~~~- 708 (886)
|.+|++.-.+.. +. -.+|..|.+.|..++|.. ..+.+|++++ .|+.|.+-|..+ +...+.+..
T Consensus 110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~-------g~~~~a~sgh 182 (350)
T KOG0641|consen 110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGR-------GQGFHALSGH 182 (350)
T ss_pred CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCC-------CCcceeecCC
Confidence 999999765433 22 256778999999999963 1245777654 467788888877 665555554
Q ss_pred CCCeEEE-EEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEec--C-----CCCeEEEEec-CCCEEEEEECCCcEEEE
Q 002736 709 KANVCCV-QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--H-----NKTVSYVKFV-DATTLVSASTDNTLKLW 779 (886)
Q Consensus 709 ~~~v~~v-~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~--h-----~~~V~~v~f~-~~~~l~sgs~Dg~i~lw 779 (886)
.+.|.++ .|+ +..+++|+.|.+|++||+|-+.. +.++.. | ..+|.+|+.. .|.+|++|-.|..+.+|
T Consensus 183 tghilalyswn---~~m~~sgsqdktirfwdlrv~~~-v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~ly 258 (350)
T KOG0641|consen 183 TGHILALYSWN---GAMFASGSQDKTIRFWDLRVNSC-VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLY 258 (350)
T ss_pred cccEEEEEEec---CcEEEccCCCceEEEEeeeccce-eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEE
Confidence 3445554 343 77999999999999999997763 554431 2 2678888884 89999999999999999
Q ss_pred eCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEE
Q 002736 780 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFIS 859 (886)
Q Consensus 780 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 859 (886)
|++.+ ++++.|..|+..|.+|.|||..-|+.+||.|..|++-|+...- ... ++..-...|...+.
T Consensus 259 dirg~------r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdl-a~e--------l~~~vv~ehkdk~i 323 (350)
T KOG0641|consen 259 DIRGG------RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDL-AHE--------LPIMVVAEHKDKAI 323 (350)
T ss_pred EeeCC------ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccch-hhc--------CceEEEEeccCceE
Confidence 99987 6799999999999999999999999999999999999986421 000 01111245777899
Q ss_pred EEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 860 SVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 860 ~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
.+.|+|+.- .+++.+.|.++.+|.+
T Consensus 324 ~~rwh~~d~-sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 324 QCRWHPQDF-SFISSSADKTATLWAL 348 (350)
T ss_pred EEEecCccc-eeeeccCcceEEEecc
Confidence 999999998 8999999999999975
No 304
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=3.8e-26 Score=247.08 Aligned_cols=207 Identities=17% Similarity=0.208 Sum_probs=154.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhc---CCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
..+...+|++++..++ ++.++ ..+.++++||| .|++|.+++. .....+++..+..++.||+.||.|||++||+|
T Consensus 51 ~~l~~l~h~~iv~~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H 128 (287)
T cd06621 51 EINKSCKSPYIVKYYG-AFLDE-SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIH 128 (287)
T ss_pred HHHHhCCCCCeeeeee-EEEcc-CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455668898888776 44333 34568899999 7889988763 23456899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
+||+|+||+++.++.++++|||++.......
T Consensus 129 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------------- 159 (287)
T cd06621 129 RDIKPSNILLTRKGQVKLCDFGVSGELVNSL------------------------------------------------- 159 (287)
T ss_pred CCCCHHHEEEecCCeEEEeeccccccccccc-------------------------------------------------
Confidence 9999999999999999999999984331110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
.....++..|+|||.+.+..++.++|||||||++|||
T Consensus 160 -------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l 196 (287)
T cd06621 160 -------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196 (287)
T ss_pred -------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence 0012457789999999888899999999999999999
Q ss_pred hc---CCCCCc----hhhHHhHhhccCCCChhh------hccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 266 FC---PFSTGE----EKTRTMSSLRHRVLPPQL------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 266 l~---pf~~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
++ ||.... ........+.....+... ....+.+.+|+.+||.++|.+|||+.|+++||||.....
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred HhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 99 665431 111222222221111110 112346789999999999999999999999999966543
No 305
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=1.1e-26 Score=251.84 Aligned_cols=202 Identities=15% Similarity=0.252 Sum_probs=149.8
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++...+ ++. ..+.++++|||.+++|.+++.+....+++..++.++.||+.||.|||++||+|||||
T Consensus 55 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~ 130 (291)
T cd07844 55 SLLKDLKHANIVTLHD-IIH---TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLK 130 (291)
T ss_pred HHHhhCCCcceeeEEE-EEe---cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence 3445567888887666 433 346789999997789999997665678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++........
T Consensus 131 p~nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 158 (291)
T cd07844 131 PQNLLISERGELKLADFGLARAKSVPSK---------------------------------------------------- 158 (291)
T ss_pred HHHEEEcCCCCEEECccccccccCCCCc----------------------------------------------------
Confidence 9999999999999999999843211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g 200 (291)
T cd07844 159 --------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATG 200 (291)
T ss_pred --------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhC
Confidence 0001145778999999876 458999999999999999998
Q ss_pred --CCCCCchhhHHhHhhc---cC---------------------CC-Chh----hhccC--hhhHHHHHHccCCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLR---HR---------------------VL-PPQ----LLLKF--PKEASFCLWLLHPEPSGRP 314 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~---~~---------------------~~-~~~----~~~~~--~~~~~li~~~L~~dP~~Rp 314 (886)
||............+. .. .. +.. ..... +.+.+++.+||+++|.+||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rp 280 (291)
T cd07844 201 RPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRI 280 (291)
T ss_pred CCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCccccc
Confidence 6644332211111100 00 00 000 01122 5667999999999999999
Q ss_pred CHHHHhcCCCC
Q 002736 315 KMGELLQSEFL 325 (886)
Q Consensus 315 s~~eil~h~~~ 325 (886)
|+.++++||||
T Consensus 281 s~~e~l~~~~f 291 (291)
T cd07844 281 SAAEAMKHPYF 291 (291)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 306
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.94 E-value=2.3e-26 Score=245.14 Aligned_cols=202 Identities=16% Similarity=0.115 Sum_probs=150.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ +|.. ..+.++++||| .+++|.+++.+....+++..+..++.||+.||.|||++||+|||||
T Consensus 49 ~l~~l~h~~iv~~~~-~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 125 (262)
T cd05058 49 IMKDFSHPNVLSLLG-ICLP--SEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLA 125 (262)
T ss_pred HHccCCCCCcceEEE-Eeec--CCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 345568888888766 5542 23456788888 8899999997655567888899999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+|++|||+++..........
T Consensus 126 ~~nili~~~~~~kl~dfg~~~~~~~~~~~~~------------------------------------------------- 156 (262)
T cd05058 126 ARNCMLDESFTVKVADFGLARDIYDKEYYSV------------------------------------------------- 156 (262)
T ss_pred cceEEEcCCCcEEECCccccccccCCcceee-------------------------------------------------
Confidence 9999999999999999999854321100000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~ 199 (262)
T cd05058 157 -------------------------------------HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 199 (262)
T ss_pred -------------------------------------cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCC
Confidence 00001144667999999988889999999999999999998
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++...........+.....++.....++.+.+++.+||..+|++||++.++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 200 APPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 333333333333333333333333334567889999999999999999999986
No 307
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.94 E-value=1.9e-26 Score=246.67 Aligned_cols=207 Identities=17% Similarity=0.216 Sum_probs=155.1
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+....|++++..++ ++. ..+.++++||| .|++|.++|.+. ..+++..+..++.||+.||.|||++||+|+|
T Consensus 54 ~~~l~~l~h~~iv~~~~-~~~---~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~ 128 (268)
T cd06630 54 IRLMARLNHPHIIRMLG-ATC---EDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIHRD 128 (268)
T ss_pred HHHHHHcCCCceehhhc-eec---cCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 33445567888888777 443 34578888898 889999999654 5789999999999999999999999999999
Q ss_pred cCCcceeeccCC-ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 108 VRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 108 lkP~NIll~~~~-~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
|||+||+++..+ .+|++|||.+...........
T Consensus 129 i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~---------------------------------------------- 162 (268)
T cd06630 129 VKGANLLIDSTGQRLRIADFGAAARLAAKGTGAG---------------------------------------------- 162 (268)
T ss_pred CCHHHEEEcCCCCEEEEcccccccccccccccCC----------------------------------------------
Confidence 999999998776 599999999854422100000
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
.......|+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 163 ----------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~ 202 (268)
T cd06630 163 ----------------------------------------EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMA 202 (268)
T ss_pred ----------------------------------------ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHH
Confidence 0001126788899999998888999999999999999999
Q ss_pred c---CCCCCch--hhHHhHhhc-cCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 267 C---PFSTGEE--KTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 267 ~---pf~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
+ ||..... ....+.... ....+.......+.+.+++.+||..+|.+||++.++++||||.
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 203 TAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred hCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 9 6643322 112221211 1222333334567888999999999999999999999999984
No 308
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=2.3e-26 Score=243.67 Aligned_cols=204 Identities=15% Similarity=0.189 Sum_probs=152.3
Q ss_pred cccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhccc
Q 002736 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (886)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (886)
|+.|.. .+...+|++++..++ +|.+ ...++++||| .+++|.+++.+....+++.+++.++.||+.||.|||++
T Consensus 40 ~~~e~~--~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 113 (252)
T cd05084 40 FLQEAR--ILKQYSHPNIVRLIG-VCTQ---KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK 113 (252)
T ss_pred HHHHHH--HHHhCCCCCcceEEE-EEcC---CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444433 344567888888666 5543 4568899998 78999999966555689999999999999999999999
Q ss_pred CeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcc
Q 002736 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (886)
Q Consensus 102 giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 181 (886)
||+||||||+||+++.++.+|++|||++......... .
T Consensus 114 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------~----- 151 (252)
T cd05084 114 HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-------------------------------------S----- 151 (252)
T ss_pred CccccccchheEEEcCCCcEEECccccCccccccccc-------------------------------------c-----
Confidence 9999999999999999999999999998533110000 0
Q ss_pred ccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHH
Q 002736 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (886)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvi 261 (886)
.......+..|+|||.+.+..++.++|||||||+
T Consensus 152 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 185 (252)
T cd05084 152 ----------------------------------------------TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL 185 (252)
T ss_pred ----------------------------------------------cCCCCCCceeecCchhhcCCCCChHHHHHHHHHH
Confidence 0000012346999999998889999999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|||++ ||..... ......+.....++.....+..+.+|+.+||+++|.+||++.++++
T Consensus 186 l~e~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 186 LWEAFSLGAVPYANLSN-QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHhCCCCCccccCH-HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999996 5543332 2233333333333333445677889999999999999999999875
No 309
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=7.7e-27 Score=249.61 Aligned_cols=200 Identities=16% Similarity=0.206 Sum_probs=150.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .+++|.+++.+. ..+++..+..++.||+.||.|||+.||+||||
T Consensus 58 ~~l~~~~h~~ii~~~~-~~~---~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 132 (267)
T cd06646 58 FMVKECKHCNIVAYFG-SYL---SREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDI 132 (267)
T ss_pred HHHHhcCCCCeeeeeE-EEE---eCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence 3455678899888777 443 34578899999 778999998544 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++........
T Consensus 133 ~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 161 (267)
T cd06646 133 KGANILLTDNGDVKLADFGVAAKITATIA--------------------------------------------------- 161 (267)
T ss_pred CHHHEEECCCCCEEECcCccceeeccccc---------------------------------------------------
Confidence 99999999999999999999854311100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC---CCCCCcccccchHHHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDIwSlGvil~eL 265 (886)
......|+..|+|||.+. ...++.++|||||||++|||
T Consensus 162 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el 202 (267)
T cd06646 162 ---------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202 (267)
T ss_pred ---------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHH
Confidence 001125788899999885 34478899999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCChhh---hccChhhHHHHHHccCCCCCCCCCHHHHhcCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 324 (886)
++ ||..................++.+ ...++.+.+|+.+||..+|.+||+++++++|+|
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 203 AELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 98 664433222221111111122222 234567889999999999999999999999987
No 310
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=2.1e-26 Score=247.67 Aligned_cols=203 Identities=17% Similarity=0.180 Sum_probs=157.0
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+.+.+|++++..++ ++. ..+.++++||| .|++|.+++.. ..+++..+..++.||+.||+|||+.||+|+|
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~d 126 (277)
T cd06640 53 ITVLSQCDSPYVTKYYG-SYL---KGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRD 126 (277)
T ss_pred HHHHHhCCCCCEeeEEE-EEE---ECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcC
Confidence 33455678888888777 443 34678999999 78899999965 4689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|+|+||+++.++.++++|||++........
T Consensus 127 l~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 156 (277)
T cd06640 127 IKAANVLLSEQGDVKLADFGVAGQLTDTQI-------------------------------------------------- 156 (277)
T ss_pred CChhhEEEcCCCCEEEcccccceeccCCcc--------------------------------------------------
Confidence 999999999999999999999853321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......++.+|+|||.+.+..++.++|+|||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~t 196 (277)
T cd06640 157 ----------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK 196 (277)
T ss_pred ----------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHH
Confidence 0001256888999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||....... ....+.....+.......+.+.+++.+||..+|.+||++.++++|+||...
T Consensus 197 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 197 GEPPNSDMHPMR-VLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred CCCCCCCcChHh-HhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 554333222 222222222333333445678899999999999999999999999998654
No 311
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=4.9e-27 Score=253.67 Aligned_cols=252 Identities=12% Similarity=0.157 Sum_probs=165.8
Q ss_pred cccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhc
Q 002736 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.+.+.|+|.+ +..+..-+|++|. .....+.+|.+|+| .||++..+|.+. +.|.+..++.|+..+..||++.|
T Consensus 674 aHVKAERDIL--AEADn~WVVrLyy----SFQDkdnLYFVMdYIPGGDmMSLLIrm-gIFeE~LARFYIAEltcAiesVH 746 (1034)
T KOG0608|consen 674 AHVKAERDIL--AEADNEWVVRLYY----SFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFEEDLARFYIAELTCAIESVH 746 (1034)
T ss_pred hhhhhhhhhH--hhcCCcceEEEEE----EeccCCceEEEEeccCCccHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHH
Confidence 4456677764 4456677777777 34456889999999 999999998665 68899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhh-c-ccccccccccCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT-R-LRREDLQLVTAP 177 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~d~~~~~~~ 177 (886)
..|+|||||||+||||+.+|+|||+|||+|.-+...-. ..-++. . ...+.+.+
T Consensus 747 kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd---------------------skYYq~gdH~RqDSmep---- 801 (1034)
T KOG0608|consen 747 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD---------------------SKYYQEGDHHRQDSMEP---- 801 (1034)
T ss_pred hccceecccCccceEEccCCceeeeeccccccceeccc---------------------cccccCCCccccccCCC----
Confidence 99999999999999999999999999999976532210 000000 0 00000000
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
..++++. ....+.+.++-. ..+.+-. .-.++||+.|+|||++....|+..+|+||
T Consensus 802 ~~e~~d~------------------~~~lkvL~~ra~--~~h~r~~-----ahslvgt~nyiapevl~r~g~~q~cdwws 856 (1034)
T KOG0608|consen 802 SPEWADI------------------SKCLKVLERRAM--RQHQRIL-----AHSLVGTPNYIAPEVLARTGYTQLCDWWS 856 (1034)
T ss_pred chhhccc------------------cccchHHHHHHH--hhhhhhh-----hhhhcCCCcccChHHhcccCccccchhhH
Confidence 0000000 000111111100 0000011 11259999999999999999999999999
Q ss_pred HHHHHHHHhc---CCCCCchhhHHhHhhc--cCCCChhhhccChhhHHHHHHccCCCCCCCC---CHHHHhcCCCCCCCc
Q 002736 258 LGVLLFELFC---PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (886)
Q Consensus 258 lGvil~eLl~---pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---s~~eil~h~~~~~~~ 329 (886)
.|||||||+. ||.........+..+. ...-.+.-...++++.++|.+++ .++..|. .++|+..||||+...
T Consensus 857 ~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 857 VGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred hhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccc
Confidence 9999999998 7755443333332221 11112233445678888887754 4667784 478899999999864
Q ss_pred C
Q 002736 330 D 330 (886)
Q Consensus 330 ~ 330 (886)
.
T Consensus 936 f 936 (1034)
T KOG0608|consen 936 F 936 (1034)
T ss_pred h
Confidence 3
No 312
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=1.4e-26 Score=246.13 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=153.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+....|++++..++ +|. .+.++++||| .+++|.+++......+++..++.++.||+.||.|||++||+||||
T Consensus 47 ~~l~~l~h~~ii~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 121 (257)
T cd05115 47 EIMHQLDNPYIVRMIG-VCE----AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDL 121 (257)
T ss_pred HHHHhcCCCCeEEEEE-EEc----CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeeccc
Confidence 3444567888888766 553 3467889998 789999999655567899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++.....+.....
T Consensus 122 kp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~------------------------------------------------ 153 (257)
T cd05115 122 AARNVLLVNQHYAKISDFGLSKALGADDSYYK------------------------------------------------ 153 (257)
T ss_pred chheEEEcCCCcEEeccCCccccccCCcccee------------------------------------------------
Confidence 99999999999999999999864322210000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
..+...++..|+|||.+.+..++.++|||||||++|||++
T Consensus 154 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 194 (257)
T cd05115 154 ---------------------------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSY 194 (257)
T ss_pred ---------------------------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcC
Confidence 0000123567999999988889999999999999999985
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... ....+..+.....++.....++++.+++.+||..+|++||++.++++
T Consensus 195 g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 195 GQKPYKKMK-GPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CCCCcCcCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 664443 33344444444444444556788889999999999999999999875
No 313
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=1.3e-26 Score=249.45 Aligned_cols=202 Identities=17% Similarity=0.172 Sum_probs=154.5
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+...+|++++..++ .+. ..+.++++||| .|++|.+++.. ..+++..++.++.||+.||.|||++||+|+|
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~d 126 (277)
T cd06642 53 ITVLSQCDSPYITRYYG-SYL---KGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRD 126 (277)
T ss_pred HHHHHcCCCCccHhhhc-ccc---cCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccC
Confidence 34455567888888777 333 34678999999 78899999854 4689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|+|+||+++.++.++++|||++........
T Consensus 127 l~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 156 (277)
T cd06642 127 IKAANVLLSEQGDVKLADFGVAGQLTDTQI-------------------------------------------------- 156 (277)
T ss_pred CChheEEEeCCCCEEEccccccccccCcch--------------------------------------------------
Confidence 999999999999999999999854321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t 196 (277)
T cd06642 157 ----------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK 196 (277)
T ss_pred ----------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHh
Confidence 0011257888999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
||....... ....+.....+.........+.+++.+||..+|.+||++.++++||||..
T Consensus 197 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 197 GEPPNSDLHPMR-VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CCCCCcccchhh-HHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 553332222 11122222222222234566789999999999999999999999999864
No 314
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=2.8e-26 Score=249.08 Aligned_cols=200 Identities=17% Similarity=0.241 Sum_probs=146.3
Q ss_pred ccccCCCCCCccccccc--cCCceEEEEeeCCcchhhhhcCC----CCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 36 DHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~--~~~~~~i~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.|++++..++ ++.... ....+|++|||..++|.+++... ...+++..++.++.||+.||.|||++||+|||||
T Consensus 59 ~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~ 137 (295)
T cd07837 59 ESIYIVRLLD-VEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLK 137 (295)
T ss_pred CCCCccceee-eEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 4577777665 333221 12347899999777999988432 2458999999999999999999999999999999
Q ss_pred Ccceeecc-CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 110 PSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 110 P~NIll~~-~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
|+||+++. .+.+|++|||++........
T Consensus 138 ~~nil~~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------------- 166 (295)
T cd07837 138 PQNLLVDKQKGLLKIADLGLGRAFSIPVK--------------------------------------------------- 166 (295)
T ss_pred hHHEEEecCCCeEEEeecccceecCCCcc---------------------------------------------------
Confidence 99999998 88999999998853311100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~ 267 (886)
......++++|+|||.+.+ ..++.++|||||||++|||++
T Consensus 167 ---------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 207 (295)
T cd07837 167 ---------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207 (295)
T ss_pred ---------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHc
Confidence 0001156788999998876 447999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccC---------------------C-CCh----hhhccChhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 ---PFSTGEEKTRTMSSLRHR---------------------V-LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---------------------~-~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e 318 (886)
||................ . .+. ......+.+.+||.+||.+||.+||++.|
T Consensus 208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 665544333222211100 0 000 01234567789999999999999999999
Q ss_pred HhcCCCCC
Q 002736 319 LLQSEFLN 326 (886)
Q Consensus 319 il~h~~~~ 326 (886)
++.||||+
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999985
No 315
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94 E-value=2.7e-26 Score=248.06 Aligned_cols=198 Identities=16% Similarity=0.173 Sum_probs=148.0
Q ss_pred ccccCCCCCCcccccc--ccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 36 DHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~--~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
+|++++..++ ++... ...+.++++||| .|++|.+++.. ....+++..+..++.||+.||.|||++||+|||||
T Consensus 73 ~h~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 151 (286)
T cd06638 73 DHPNVVKFYG-MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVK 151 (286)
T ss_pred cCCCeeeeee-eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 6888888776 43221 234568999999 78999998742 23568899999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++........
T Consensus 152 p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 179 (286)
T cd06638 152 GNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------------- 179 (286)
T ss_pred HHhEEECCCCCEEEccCCceeecccCCC----------------------------------------------------
Confidence 9999999999999999999854311100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-----CCCCcccccchHHHHHHH
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFE 264 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDIwSlGvil~e 264 (886)
......|++.|+|||.+.. ..++.++|||||||++||
T Consensus 180 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e 221 (286)
T cd06638 180 --------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE 221 (286)
T ss_pred --------------------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence 0011257889999999853 348899999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCCh--hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
|++ ||.......... .......+. ........+.+|+.+||+.+|.+||++.|+++|+||
T Consensus 222 l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 222 LGDGDPPLADLHPMRALF-KIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HhcCCCCCCCCchhHHHh-hccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 998 665443322222 222211111 111234568899999999999999999999999997
No 316
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=1.5e-26 Score=242.87 Aligned_cols=187 Identities=16% Similarity=0.120 Sum_probs=143.9
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
..|++++..+. .+. ..+.++++||| .|++|.+++.+. ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 42 ~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 116 (237)
T cd05576 42 HCVPNMVCLHK-YIV---SEDSVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNI 116 (237)
T ss_pred cCCCceeehhh-hee---cCCeEEEEEecCCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 45778777666 332 34678999999 789999999654 4689999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
+++.++.++++|||.+.......
T Consensus 117 l~~~~~~~~l~df~~~~~~~~~~--------------------------------------------------------- 139 (237)
T cd05576 117 LLDDRGHIQLTYFSRWSEVEDSC--------------------------------------------------------- 139 (237)
T ss_pred EEcCCCCEEEecccchhcccccc---------------------------------------------------------
Confidence 99999999999999874331110
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
....++..|+|||.+.+..++.++||||+||++|||++ ||.
T Consensus 140 ------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 140 ------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred ------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 00134667999999988889999999999999999998 332
Q ss_pred CCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH-----HHHhcCCCC
Q 002736 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 325 (886)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~eil~h~~~ 325 (886)
..... ..............+.+.+++.+||+.||.+||++ +++++||||
T Consensus 184 ~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 184 CHPSG------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCchh------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 11110 00000011112345778899999999999999986 999999997
No 317
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.94 E-value=1.9e-26 Score=252.99 Aligned_cols=198 Identities=16% Similarity=0.121 Sum_probs=151.4
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|+|++.+++ .|.. +..++++|| .+++|.+++.+....+++..+..++.||+.||+|||++||+||||
T Consensus 61 ~~l~~l~h~niv~~~g-~~~~----~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dl 135 (316)
T cd05108 61 YVMASVDNPHVCRLLG-ICLT----STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDL 135 (316)
T ss_pred HHHHhCCCCCCCeEEE-EEcC----CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence 3455668999988776 6653 234556666 899999999776667899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.+||+|||+++.........
T Consensus 136 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~------------------------------------------------- 166 (316)
T cd05108 136 AARNVLVKTPQHVKITDFGLAKLLGADEKEY------------------------------------------------- 166 (316)
T ss_pred chhheEecCCCcEEEccccccccccCCCcce-------------------------------------------------
Confidence 9999999999999999999996543221000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 ---------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~ 207 (316)
T cd05108 167 ---------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 207 (316)
T ss_pred ---------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcC
Confidence 0000133567999999998889999999999999999985
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||... ........+.....++....+...+..++.+||..+|.+||++.+++.
T Consensus 208 g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 208 GSKPYDGI-PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred CCCCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 55433 222333333333334444456678889999999999999999999986
No 318
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.94 E-value=1.4e-26 Score=251.59 Aligned_cols=204 Identities=18% Similarity=0.282 Sum_probs=157.2
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .+++|..++.. ..+++..++.++.||+.||.|||++||+||||
T Consensus 70 ~~l~~l~hp~i~~~~~-~~~---~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl 143 (297)
T cd06659 70 VIMRDYQHQNVVEMYK-SYL---VGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDI 143 (297)
T ss_pred HHHHhCCCCchhhhhh-hee---eCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 3455567888877666 333 34678889998 78899998744 45899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+||+|||++........
T Consensus 144 ~p~Nill~~~~~~kL~dfg~~~~~~~~~~--------------------------------------------------- 172 (297)
T cd06659 144 KSDSILLTLDGRVKLSDFGFCAQISKDVP--------------------------------------------------- 172 (297)
T ss_pred CHHHeEEccCCcEEEeechhHhhcccccc---------------------------------------------------
Confidence 99999999999999999998853321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 173 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g 213 (297)
T cd06659 173 ---------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDG 213 (297)
T ss_pred ---------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 0011367889999999988889999999999999999998
Q ss_pred --CCCCCchhhHHhHhhccCCC--ChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
||...... ..+..+..... ........+.+.+++.+||..+|.+||++.++++||||.....
T Consensus 214 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 214 EPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred CCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 77544332 23333332211 1122234567789999999999999999999999999987543
No 319
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94 E-value=3.7e-26 Score=245.06 Aligned_cols=202 Identities=20% Similarity=0.262 Sum_probs=153.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. ..+.++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++|++|+|||
T Consensus 61 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 135 (272)
T cd06629 61 TLKDLDHLNIVQYLG-FET---TEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLK 135 (272)
T ss_pred HHHhcCCCCcceEEE-Eec---cCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCC
Confidence 445567888887766 444 34678889999 899999999665 578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++.........
T Consensus 136 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~--------------------------------------------------- 164 (272)
T cd06629 136 ADNLLVDADGICKISDFGISKKSDDIYDN--------------------------------------------------- 164 (272)
T ss_pred hhhEEEcCCCeEEEeeccccccccccccc---------------------------------------------------
Confidence 99999999999999999998533111000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC--CCcccccchHHHHHHHHhc
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDIwSlGvil~eLl~ 267 (886)
.......|+..|+|||.+.... ++.++|+|||||++|||++
T Consensus 165 -------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~ 207 (272)
T cd06629 165 -------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA 207 (272)
T ss_pred -------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh
Confidence 0001125788899999987654 8999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccC---CCCh-hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHR---VLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||................ ..++ .....+..+.+++.+||.++|.+||++.++++|||+
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 208 GRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 665443332222221111 1111 122345678899999999999999999999999996
No 320
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.94 E-value=1.8e-26 Score=251.85 Aligned_cols=198 Identities=16% Similarity=0.143 Sum_probs=145.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC------------------CCcChHHHHHHHHHH
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECLHIFRQI 91 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~------------------~~l~~~~~~~i~~qi 91 (886)
.+....|++++.+++ ++.+ .+.++++||| .+++|.++|.... ..+++.++..|+.||
T Consensus 72 ~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i 147 (304)
T cd05096 72 ILSRLKDPNIIRLLG-VCVD---EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQI 147 (304)
T ss_pred HHhhcCCCCeeEEEE-EEec---CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHH
Confidence 344557888888776 5543 3568999999 7899999984321 246778899999999
Q ss_pred HHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccccccc
Q 002736 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (886)
Q Consensus 92 ~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 171 (886)
+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 148 ~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~--------------------------------- 194 (304)
T cd05096 148 ASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY--------------------------------- 194 (304)
T ss_pred HHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCcee---------------------------------
Confidence 99999999999999999999999999999999999998543111000
Q ss_pred ccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCc
Q 002736 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (886)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ 251 (886)
.......++..|+|||++.+..++.
T Consensus 195 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 219 (304)
T cd05096 195 -------------------------------------------------------RIQGRAVLPIRWMAWECILMGKFTT 219 (304)
T ss_pred -------------------------------------------------------EecCcCCCCccccCHHHHhcCCCCc
Confidence 0000124567899999998888999
Q ss_pred ccccchHHHHHHHHhc-----CCCCCchhhHHhHhh----cc---CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHH
Q 002736 252 ASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (886)
Q Consensus 252 ~sDIwSlGvil~eLl~-----pf~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 319 (886)
++|||||||++|||++ ||....... .+... .. ...+.....+++.+.+|+.+||..+|.+|||+.++
T Consensus 220 ~~Dv~slG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i 298 (304)
T cd05096 220 ASDVWAFGVTLWEILMLCKEQPYGELTDEQ-VIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDI 298 (304)
T ss_pred hhhhHHHHHHHHHHHHccCCCCCCcCCHHH-HHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 9999999999999985 554433222 11111 11 11122223455678899999999999999999998
Q ss_pred hc
Q 002736 320 LQ 321 (886)
Q Consensus 320 l~ 321 (886)
.+
T Consensus 299 ~~ 300 (304)
T cd05096 299 HA 300 (304)
T ss_pred HH
Confidence 54
No 321
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94 E-value=3.1e-26 Score=246.65 Aligned_cols=198 Identities=15% Similarity=0.106 Sum_probs=150.3
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+.+.+|++++..++ +|.. ..+++++|| .+++|.+++......+++..++.++.||+.||.|||++||+||||
T Consensus 61 ~~l~~l~h~~iv~~~~-~~~~----~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dl 135 (279)
T cd05111 61 LAMGSLDHAYIVRLLG-ICPG----ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNL 135 (279)
T ss_pred HHHhcCCCCCcceEEE-EECC----CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecccc
Confidence 3456778999988777 5432 334556666 889999999765567899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||+++........
T Consensus 136 kp~nili~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------------- 165 (279)
T cd05111 136 AARNILLKSDSIVQIADFGVADLLYPDDKK-------------------------------------------------- 165 (279)
T ss_pred CcceEEEcCCCcEEEcCCccceeccCCCcc--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 --------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~ 207 (279)
T cd05111 166 --------------------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSY 207 (279)
T ss_pred --------------------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcC
Confidence 00011245678999999988889999999999999999996
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+.....++....+......++.+||..+|.+||++.|+++
T Consensus 208 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 208 GAEPYAGMRP-HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCCCCCH-HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6644332 2223333333333333345567789999999999999999999865
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.93 E-value=1.3e-26 Score=246.50 Aligned_cols=199 Identities=17% Similarity=0.145 Sum_probs=156.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+.+.+|++++..+. .+. ..+.+++++|| .|++|.+++.+. ..+++.++..++.||++||.|||++||+|+||
T Consensus 52 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl 126 (258)
T cd05578 52 RILQELNHPFLVNLWY-SFQ---DEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDI 126 (258)
T ss_pred HHHHhCCCCChHHHHH-hhc---CCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 4556678898888666 332 34678889998 899999999665 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++........
T Consensus 127 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 155 (258)
T cd05578 127 KPDNILLDEQGHVHITDFNIATKVTPDTL--------------------------------------------------- 155 (258)
T ss_pred CHHHeEEcCCCCEEEeecccccccCCCcc---------------------------------------------------
Confidence 99999999999999999998854321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....|+..|+|||.+.+..++.++|+|||||++|+|++
T Consensus 156 ----------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g 195 (258)
T cd05578 156 ----------------------------------------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRG 195 (258)
T ss_pred ----------------------------------------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhC
Confidence 001256788999999988889999999999999999998
Q ss_pred --CCCCCch--hhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH--HHHhcCCCC
Q 002736 268 --PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM--GELLQSEFL 325 (886)
Q Consensus 268 --pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~--~eil~h~~~ 325 (886)
||..... .......... ..+..+...++.+.+++.+||..||.+||++ .|+++||||
T Consensus 196 ~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 196 KRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred CCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 7755443 2222222221 2223333455788899999999999999999 999999997
No 323
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.93 E-value=2.7e-26 Score=243.99 Aligned_cols=198 Identities=13% Similarity=0.115 Sum_probs=152.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+....|++++..++ +|. .+.++++||| .+++|.+++.+. ..+++..+..++.||+.||.|||++||+||||
T Consensus 48 ~~l~~l~h~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl 121 (257)
T cd05116 48 NVMQQLDNPYIVRMIG-ICE----AESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDL 121 (257)
T ss_pred HHHHhCCCCCcceEEE-EEc----CCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence 3455568888888776 553 3457889999 778999999654 56899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++..........
T Consensus 122 kp~nill~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------------------------- 152 (257)
T cd05116 122 AARNVLLVTQHYAKISDFGLSKALGADENYY------------------------------------------------- 152 (257)
T ss_pred chhhEEEcCCCeEEECCCccccccCCCCCee-------------------------------------------------
Confidence 9999999999999999999986542221000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......++..|+|||.+....++.++|||||||++|||++
T Consensus 153 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~ 194 (257)
T cd05116 153 --------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSY 194 (257)
T ss_pred --------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhC
Confidence 00001134567999999988889999999999999999986
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+.....++.+...++++.++|.+||+.||.+||++.+|.+
T Consensus 195 g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 195 GQKPYKGMKG-NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 6644433 3344444444444445567788999999999999999999999865
No 324
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.93 E-value=3.5e-27 Score=264.33 Aligned_cols=202 Identities=17% Similarity=0.247 Sum_probs=155.6
Q ss_pred cccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCC--c-ChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS--V-DVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~--l-~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+-+|+|+|++|| .|......||..|.|.-+|.++++..... . ...+.+.++.|++.||.+||+.+|||||||
T Consensus 558 eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLk 633 (903)
T KOG1027|consen 558 ESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLK 633 (903)
T ss_pred hccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCC
Confidence 3459999999999 67777889999999999999999763111 1 125668899999999999999999999999
Q ss_pred Ccceeecc---C--CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 110 PSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 110 P~NIll~~---~--~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
|.||||+. + ..++|.|||+|+....+..
T Consensus 634 PQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s----------------------------------------------- 666 (903)
T KOG1027|consen 634 PQNILISVPSADGTLRAKISDFGLSKKLAGGKS----------------------------------------------- 666 (903)
T ss_pred CceEEEEccCCCcceeEEecccccccccCCCcc-----------------------------------------------
Confidence 99999975 2 3589999999987643310
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~e 264 (886)
.++ +.....||..|+|||++....-+.++||+||||++|+
T Consensus 667 ---------------------------------------S~~-r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyY 706 (903)
T KOG1027|consen 667 ---------------------------------------SFS-RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYY 706 (903)
T ss_pred ---------------------------------------hhh-cccCCCCcccccCHHHHhccccCcccchhhcCceEEE
Confidence 000 1122378999999999999888889999999999999
Q ss_pred Hhc----CCCCCchhhHHhHhhccCCCChhhhccCh--hhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
.++ ||.....+...+ ......-......+ ++.+||.+|++++|..||+|.++|.||||...
T Consensus 707 vltgG~HpFGd~~~R~~NI---l~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 707 VLTGGSHPFGDSLERQANI---LTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred EecCCccCCCchHHhhhhh---hcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 998 886554443322 22211111111122 77899999999999999999999999999864
No 325
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93 E-value=3e-26 Score=243.31 Aligned_cols=201 Identities=17% Similarity=0.234 Sum_probs=157.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++..++ .+. ..+.++++||| .+++|.+++... ...+++..++.++.||+.||.|||++||+|+|
T Consensus 51 ~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~ 126 (256)
T cd08218 51 AVLSNMKHPNIVQYQE-SFE---ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRD 126 (256)
T ss_pred HHHHhCCCCCeeeeEe-eec---CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 3455567888877666 332 34678899998 788999998543 34679999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|+|+||+++.++.++++|||.+........
T Consensus 127 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------------- 156 (256)
T cd08218 127 IKSQNIFLTKDGTIKLGDFGIARVLNSTVE-------------------------------------------------- 156 (256)
T ss_pred CCHHHEEEcCCCCEEEeeccceeecCcchh--------------------------------------------------
Confidence 999999999999999999998854321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......|++.|+|||.+.+..++.++|+|||||++|+|++
T Consensus 157 ----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08218 157 ----------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCT 196 (256)
T ss_pred ----------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHc
Confidence 0001256788999999988889999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||............+ ....++........+.++|.+||+.+|.+||++.++++||||
T Consensus 197 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 197 LKHAFEAGNMKNLVLKII-RGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CCCCccCCCHHHHHHHHh-cCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 676555444443333 333444444566788999999999999999999999999997
No 326
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.93 E-value=3.3e-26 Score=243.12 Aligned_cols=197 Identities=17% Similarity=0.205 Sum_probs=150.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++.+ .+.++++||| .|++|.+++......+++..++.++.||+.||.|||++||+|||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 127 (256)
T cd05114 52 VMMKLSHPKLVQLYG-VCTQ---QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLA 127 (256)
T ss_pred HHHHCCCCCceeEEE-EEcc---CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence 444567888888776 4443 4678999999 7899999996554578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||.++........
T Consensus 128 p~ni~i~~~~~~kl~d~g~~~~~~~~~~~--------------------------------------------------- 156 (256)
T cd05114 128 ARNCLVSSTGVVKVSDFGMTRYVLDDEYT--------------------------------------------------- 156 (256)
T ss_pred cceEEEcCCCeEEECCCCCccccCCCcee---------------------------------------------------
Confidence 99999999999999999988543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g 198 (256)
T cd05114 157 --------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEG 198 (256)
T ss_pred --------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCC
Confidence 0000133557999999988889999999999999999997
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||...... .....+.....+.......+.+.+++.+||..+|.+||++.++++
T Consensus 199 ~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 199 KMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 66444333 333333333232223334567889999999999999999999986
No 327
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.93 E-value=2.6e-26 Score=244.00 Aligned_cols=198 Identities=16% Similarity=0.207 Sum_probs=151.0
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ +|. ..+.++++||| .+++|.+++.+....+++..++.++.||+.||.|||+.||+|+|||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 127 (256)
T cd05113 52 VMMKLSHEKLVQLYG-VCT---KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLA 127 (256)
T ss_pred HHhcCCCCCeeeEEE-EEc---cCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 344557888888776 543 34568999999 7889999997655578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||.++........
T Consensus 128 p~nili~~~~~~kl~d~g~~~~~~~~~~~--------------------------------------------------- 156 (256)
T cd05113 128 ARNCLVDDQGCVKVSDFGLSRYVLDDEYT--------------------------------------------------- 156 (256)
T ss_pred cceEEEcCCCCEEECCCccceecCCCcee---------------------------------------------------
Confidence 99999999999999999988543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g 198 (256)
T cd05113 157 --------------------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLG 198 (256)
T ss_pred --------------------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCC
Confidence 0000134667999999988889999999999999999996
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
||...... .....+.....+......++.+.+++.+||+.+|.+||++.+++.+
T Consensus 199 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 199 KMPYERFNNS-ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CCCcCcCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 66444332 2233333333333333345778899999999999999999999863
No 328
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=2.6e-25 Score=234.13 Aligned_cols=284 Identities=17% Similarity=0.260 Sum_probs=216.6
Q ss_pred cccccccccccceEEeeecCceEEE-EeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCc-ccccccc
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKA-DLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-NRDIHYP 610 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~-~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~-~~~~~~~ 610 (886)
...+++|.+|-.+++|||......- .++ .-..-....|.++.|++.|..|++.+....++|+|-+..... .....+.
T Consensus 179 GaR~~sGs~Dy~v~~wDf~gMdas~~~fr-~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQY 257 (641)
T KOG0772|consen 179 GARFVSGSLDYTVKFWDFQGMDASMRSFR-QLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQY 257 (641)
T ss_pred CceeeeccccceEEEEecccccccchhhh-ccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchh
Confidence 4568999999999999997653321 111 111234668999999999999999999999999997652111 1111111
Q ss_pred ----eEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCce-EEEEec-----ccCCcEEEEEEccCCCCEEEEEe
Q 002736 611 ----VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMR-----EHERRVWSIDFSSADPTLLASGS 680 (886)
Q Consensus 611 ----~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~-~~~~~~-----~h~~~v~~v~~~p~~~~~l~sgs 680 (886)
...-+|...++|.+|+|.+.+.++|+++||+++|||+...+ ....++ +..-+++++.|+| ++.++|+|+
T Consensus 258 I~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nr-dg~~iAagc 336 (641)
T KOG0772|consen 258 IRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNR-DGKLIAAGC 336 (641)
T ss_pred hhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCC-Ccchhhhcc
Confidence 22336888999999999999999999999999999997653 223332 3445789999998 999999999
Q ss_pred CCCcEEEEeCchhhhhhccCceeeee--ec--CCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCC--C
Q 002736 681 DDGSVKLWSINQAILLLHLGVSIGTI--KT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHN--K 754 (886)
Q Consensus 681 ~Dg~v~lwd~~~~~~~~~~~~~~~~~--~~--~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~--~ 754 (886)
.||+|.+|+...... .+...+ .| ...|+||.|+++ |++|++-+.|+++++||+|+.+.|+.+..+-. .
T Consensus 337 ~DGSIQ~W~~~~~~v-----~p~~~vk~AH~~g~~Itsi~FS~d-g~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~ 410 (641)
T KOG0772|consen 337 LDGSIQIWDKGSRTV-----RPVMKVKDAHLPGQDITSISFSYD-GNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPF 410 (641)
T ss_pred cCCceeeeecCCccc-----ccceEeeeccCCCCceeEEEeccc-cchhhhccCCCceeeeeccccccchhhhcCCCccC
Confidence 999999999865321 111111 12 247999999999 99999999999999999999998888876533 4
Q ss_pred CeEEEEec-CCCEEEEEEC------CCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEE
Q 002736 755 TVSYVKFV-DATTLVSAST------DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVY 827 (886)
Q Consensus 755 ~V~~v~f~-~~~~l~sgs~------Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iw 827 (886)
+-+.++|+ +.++|+||+. .|++.+||..+. ..+..+.-.+..|..+.|+|.=+.|..|+.||+++||
T Consensus 411 ~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~------d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 411 PGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTL------DTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred CCCccccCCCceEEEecccccCCCCCceEEEEeccce------eeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 56788997 8888888763 578999998876 3466666667778889999998888899999999998
Q ss_pred ecC
Q 002736 828 HKA 830 (886)
Q Consensus 828 d~~ 830 (886)
.-.
T Consensus 485 Ydp 487 (641)
T KOG0772|consen 485 YDP 487 (641)
T ss_pred ECc
Confidence 644
No 329
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.5e-25 Score=215.88 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=200.1
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEE-eCCCCCeEEEecCCCcEE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW-NSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~-~~~~~~~las~s~Dg~V~ 643 (886)
..|.+.|-++..+-.|..||||+.|++||||....... ........+|.++|..++| +|.-+++|||++|||.|.
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEE
Confidence 35888899999999999999999999999999875321 1122334579999999999 566799999999999999
Q ss_pred EEECCCce--EEEEecccCCcEEEEEEccCC-CCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCC
Q 002736 644 VWDVSRSQ--VLTEMREHERRVWSIDFSSAD-PTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLD 720 (886)
Q Consensus 644 iWd~~t~~--~~~~~~~h~~~v~~v~~~p~~-~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 720 (886)
||.-+.++ ...++..|...|++|+|.|.+ +-+|++++.||.|.|.+.+....- ....-..-|.-.|++|+|.|.
T Consensus 84 iWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w---~t~ki~~aH~~GvnsVswapa 160 (299)
T KOG1332|consen 84 IWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGW---TTSKIVFAHEIGVNSVSWAPA 160 (299)
T ss_pred EEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCc---cchhhhhccccccceeeecCc
Confidence 99988774 345566799999999999843 568899999999999999874110 011112235667999999986
Q ss_pred C--C-----------cEEEEEeCCCeEEEEecCCCCcc-eEEEecCCCCeEEEEec-----CCCEEEEEECCCcEEEEeC
Q 002736 721 S--G-----------RSLAFGSADHRIYYYDLRNSKIP-LCTLIGHNKTVSYVKFV-----DATTLVSASTDNTLKLWDL 781 (886)
Q Consensus 721 ~--~-----------~~l~~gs~Dg~I~vwDlr~~~~~-~~~~~~h~~~V~~v~f~-----~~~~l~sgs~Dg~i~lwd~ 781 (886)
. | +.|++|+.|+.|++|+..+..-. -.++.+|.+.|..|+|. ...+|||+|.||++.||-.
T Consensus 161 ~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~ 240 (299)
T KOG1332|consen 161 SAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTK 240 (299)
T ss_pred CCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEe
Confidence 2 1 45999999999999999886432 34589999999999994 4468999999999999988
Q ss_pred CCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecC
Q 002736 782 SMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 830 (886)
Q Consensus 782 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~ 830 (886)
+.....-...+ +......++.+.||+.|..||.++.|+.|.+|.-.
T Consensus 241 ~~e~e~wk~tl---l~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 241 DEEYEPWKKTL---LEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cCccCcccccc---cccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 74322111122 33355789999999999999999999999999644
No 330
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93 E-value=3.8e-26 Score=249.41 Aligned_cols=218 Identities=16% Similarity=0.170 Sum_probs=157.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+. ..+.++++||| .|++|.++|... +.+++..+..++.||+.||.|||++||+|||||
T Consensus 54 ~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 128 (305)
T cd05609 54 ILTFAENPFVVSMFC-SFE---TKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLK 128 (305)
T ss_pred HHHhCCCCCeeeeEE-EEe---cCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence 344567888887765 332 34678999999 789999999654 578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++..+.+|++|||+++........... .. . .
T Consensus 129 p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~-~~---------------------------------------~--~-- 164 (305)
T cd05609 129 PDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY-EG---------------------------------------H--I-- 164 (305)
T ss_pred hHHEEECCCCCEEEeeCCCccccCcCcccccc-cc---------------------------------------c--c--
Confidence 99999999999999999988532111000000 00 0 0
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.............|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 165 -------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~ 213 (305)
T cd05609 165 -------------------------------EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGC 213 (305)
T ss_pred -------------------------------ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCC
Confidence 00000000011357888999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccC-C-CChhhhccChhhHHHHHHccCCCCCCCCC---HHHHhcCCCCCCCc
Q 002736 268 -PFSTGEEKTRTMSSLRHR-V-LPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~eil~h~~~~~~~ 329 (886)
||...... ......... . .+......++.+.+++.+||+.+|.+||+ +.++|+||||....
T Consensus 214 ~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 214 VPFFGDTPE-ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred CCCCCCCHH-HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 77654333 223332222 1 22222235567889999999999999998 78999999997643
No 331
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.93 E-value=2.2e-26 Score=249.41 Aligned_cols=199 Identities=19% Similarity=0.202 Sum_probs=152.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------CCCcChHHHHHHHHHHHH
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVE 93 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~ 93 (886)
..+...+|++++..++ ++. ..+.++++||| .+++|.+++... ...+++..++.++.||+.
T Consensus 59 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 134 (291)
T cd05094 59 ELLTNLQHEHIVKFYG-VCG---DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS 134 (291)
T ss_pred HHHhcCCCCCcceEEE-EEc---cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHH
Confidence 3455567888888666 444 34678999999 789999999542 134789999999999999
Q ss_pred HHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccccccccc
Q 002736 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (886)
Q Consensus 94 ~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 173 (886)
||.|||++||+||||||+||+++.++.++++|||++..........
T Consensus 135 al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~---------------------------------- 180 (291)
T cd05094 135 GMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR---------------------------------- 180 (291)
T ss_pred HHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceee----------------------------------
Confidence 9999999999999999999999999999999999985432210000
Q ss_pred ccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCccc
Q 002736 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (886)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~s 253 (886)
......++..|+|||.+.+..++.++
T Consensus 181 ------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 206 (291)
T cd05094 181 ------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTES 206 (291)
T ss_pred ------------------------------------------------------cCCCCCcceeecChHHhccCCCCchh
Confidence 00012567789999999988899999
Q ss_pred ccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 254 DIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||||||++|||++ ||...... .....+.....+......+..+.+++.+||..+|.+||++.++++
T Consensus 207 Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 207 DVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999997 66444333 233334444333333345667889999999999999999999876
No 332
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.93 E-value=2.6e-26 Score=244.85 Aligned_cols=191 Identities=13% Similarity=0.121 Sum_probs=142.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ +|.. ....+++||| .+++|..++.+....+++..++.++.||+.||.|||++||+|||||
T Consensus 57 ~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk 132 (262)
T cd05077 57 MMRQVSHKHIVLLYG-VCVR---DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVC 132 (262)
T ss_pred HHHhCCCCCEeeEEE-EEec---CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCC
Confidence 445568999988777 5543 3567889999 7788988886655678999999999999999999999999999999
Q ss_pred CcceeeccCCc-------eeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 110 PSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 110 P~NIll~~~~~-------vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|+|||++.++. ++++|||++......
T Consensus 133 p~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----------------------------------------------- 165 (262)
T cd05077 133 TKNILLAREGIDGECGPFIKLSDPGIPITVLSR----------------------------------------------- 165 (262)
T ss_pred cccEEEecCCccCCCCceeEeCCCCCCccccCc-----------------------------------------------
Confidence 99999987664 899999987432110
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC-CCCCCcccccchHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVL 261 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDIwSlGvi 261 (886)
....++..|+|||.+. +..++.++|||||||+
T Consensus 166 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~ 198 (262)
T cd05077 166 -----------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTT 198 (262)
T ss_pred -----------------------------------------------ccccccccccChhhhcCCCCCCchhHHHHHHHH
Confidence 0125677899999987 4568999999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
+|||++ ||..... ... ........ .......+.+.+|+.+||+.||.+||++.+++++
T Consensus 199 l~el~~~~~~p~~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 199 LWEICYNGEIPLKDKTL-AEK-ERFYEGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHhCCCCCCCCcch-hHH-HHHHhcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 999984 5533221 111 11111111 1111223567899999999999999999999874
No 333
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.93 E-value=4.9e-26 Score=242.11 Aligned_cols=197 Identities=20% Similarity=0.242 Sum_probs=154.5
Q ss_pred cccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC--------CCCcChHHHHHHHHHHHHHHHhhcccCe
Q 002736 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (886)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (886)
....|++++..++ ++.+ ...++++||| .|++|.+++... ...+++.++..++.||+.||.|||++||
T Consensus 51 ~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 126 (262)
T cd00192 51 KKLGHPNVVRLLG-VCTE---EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF 126 (262)
T ss_pred hhcCCCChheeee-eecC---CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3345888888766 4443 5678999999 599999999765 4678999999999999999999999999
Q ss_pred eecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccc
Q 002736 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (886)
Q Consensus 104 iHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 183 (886)
+|+||||+||+++.++.+|++|||.+.........
T Consensus 127 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 161 (262)
T cd00192 127 VHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYY--------------------------------------------- 161 (262)
T ss_pred ccCccCcceEEECCCCcEEEccccccccccccccc---------------------------------------------
Confidence 99999999999999999999999998654322100
Q ss_pred ccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHH
Q 002736 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (886)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~ 263 (886)
.......++..|+|||.+.+..++.++|||||||++|
T Consensus 162 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (262)
T cd00192 162 -------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLW 198 (262)
T ss_pred -------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHH
Confidence 0000124577899999998888999999999999999
Q ss_pred HHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 264 eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
||++ ||.... .......+......+.....++.+.+++.+||..+|.+||++.|++++
T Consensus 199 ~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 199 EIFTLGATPYPGLS-NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 9997 564443 333334444344444445567889999999999999999999999874
No 334
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.93 E-value=3.6e-26 Score=243.21 Aligned_cols=190 Identities=17% Similarity=0.214 Sum_probs=142.7
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+....|++++..++ ++.. .+..+++||| .+++|.++|.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 53 l~~~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp 128 (258)
T cd05078 53 MSQLSHKHLVLNYG-VCVC---GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCA 128 (258)
T ss_pred HHhCCCCChhheee-EEEe---CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence 44567888888777 4432 3567788998 78899999977656789999999999999999999999999999999
Q ss_pred cceeeccCCc--------eeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 111 SCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 111 ~NIll~~~~~--------vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
+||+++.++. ++++|||++......
T Consensus 129 ~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~----------------------------------------------- 161 (258)
T cd05078 129 KNVLLIREEDRKTGNPPFIKLSDPGISITVLPK----------------------------------------------- 161 (258)
T ss_pred ceEEEecccccccCCCceEEecccccccccCCc-----------------------------------------------
Confidence 9999987765 577888776322100
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvi 261 (886)
....++..|+|||.+.+. .++.++|||||||+
T Consensus 162 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~ 194 (258)
T cd05078 162 -----------------------------------------------EILLERIPWVPPECIENPQNLSLAADKWSFGTT 194 (258)
T ss_pred -----------------------------------------------hhccccCCccCchhccCCCCCCchhhHHHHHHH
Confidence 012567789999999874 48999999999999
Q ss_pred HHHHhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|||++ +++............... ...+...++++.+++.+||+.+|.+|||++++++
T Consensus 195 l~~l~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 195 LWEIFSGGDKPLSALDSQKKLQFYEDR--HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred HHHHHcCCCCChhhccHHHHHHHHHcc--ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999998 332332222222222211 1122234467889999999999999999999987
No 335
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-26 Score=232.48 Aligned_cols=204 Identities=17% Similarity=0.256 Sum_probs=156.2
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
.|||-.+|+-. |. ..+..++.+.|| .||+|.-.+.+ +++++++.++.|...|+.||+|||++|||.||||..|+
T Consensus 308 sn~pflvglhs--cf--qtesrlffvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnv 382 (593)
T KOG0695|consen 308 SNNPFLVGLHS--CF--QTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNV 382 (593)
T ss_pred cCCCeEEehhh--hh--cccceEEEEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccce
Confidence 67887777665 32 234455666677 99999887844 48999999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
||+..|++|++|+|.|+.--.+..
T Consensus 383 lldaeghikltdygmcke~l~~gd-------------------------------------------------------- 406 (593)
T KOG0695|consen 383 LLDAEGHIKLTDYGMCKEGLGPGD-------------------------------------------------------- 406 (593)
T ss_pred EEccCCceeecccchhhcCCCCCc--------------------------------------------------------
Confidence 999999999999999964211100
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~ 270 (886)
.+.+++|||.|.|||++.|..|++++|+|+|||++|||+. ||.
T Consensus 407 ----------------------------------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 407 ----------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred ----------------------------------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 1234599999999999999999999999999999999998 873
Q ss_pred C------CchhhHHh-H-hhccCCCChhhhccChhhHHHHHHccCCCCCCCCC------HHHHhcCCCCCCCcCchHHH
Q 002736 271 T------GEEKTRTM-S-SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPRDSMEER 335 (886)
Q Consensus 271 ~------~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps------~~eil~h~~~~~~~~~~~e~ 335 (886)
- .+...... . .+...+.. +...+-++..+++..|++||.+|.. +.++..|+||......+.++
T Consensus 453 ivgm~n~d~ntedylfqvilekqiri--prslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 453 IVGMDNPDMNTEDYLFQVILEKQIRI--PRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred eecCCCcccchhHHHHHHHhhhcccc--cceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence 1 12222222 2 22222222 2344567789999999999999954 68899999999766554443
No 336
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.93 E-value=2.4e-26 Score=244.28 Aligned_cols=197 Identities=18% Similarity=0.206 Sum_probs=151.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. ..+.++++||| .|++|.+++.+....+++..++.++.||+.||.|||++||+|||||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~ 127 (256)
T cd05059 52 VMMKLSHPNLVQLYG-VCT---KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLA 127 (256)
T ss_pred HHHhCCCCCEEEEEE-EEc---CCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 444567888887666 333 34578899999 7899999997655578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||+++........
T Consensus 128 p~ni~i~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------------- 156 (256)
T cd05059 128 ARNCLVGEDNVVKVSDFGLARYVLDDQYT--------------------------------------------------- 156 (256)
T ss_pred HhhEEECCCCcEEECCcccceeccccccc---------------------------------------------------
Confidence 99999999999999999988543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g 198 (256)
T cd05059 157 --------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEG 198 (256)
T ss_pred --------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccC
Confidence 0000022456999999998889999999999999999997
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+.....++.+...++.+.+++.+||..+|++||++.|+++
T Consensus 199 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 199 KMPYERFSN-SEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred CCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 5644333 3333344433333334456778889999999999999999999986
No 337
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.93 E-value=3.5e-26 Score=247.50 Aligned_cols=199 Identities=19% Similarity=0.176 Sum_probs=151.3
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC------------CCcChHHHHHHHHHHHHHHH
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQIVEIVY 96 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~------------~~l~~~~~~~i~~qi~~~l~ 96 (886)
..+....|++++..++ +|. ..+.++++||| .+++|.++|.... ..+++..++.++.||+.||+
T Consensus 59 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~ 134 (288)
T cd05093 59 ELLTNLQHEHIVKFYG-VCV---EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMV 134 (288)
T ss_pred HHHHhCCCCCcceEEE-EEe---cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3445567888888776 444 34678899999 7899999985321 24899999999999999999
Q ss_pred hhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccC
Q 002736 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (886)
Q Consensus 97 ~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 176 (886)
|||++||+||||||+||+++.++.+|++|||++.........
T Consensus 135 ~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------- 176 (288)
T cd05093 135 YLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY-------------------------------------- 176 (288)
T ss_pred HHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCcee--------------------------------------
Confidence 999999999999999999999999999999998543211000
Q ss_pred CCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccc
Q 002736 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (886)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIw 256 (886)
.......++..|+|||.+.+..++.++|||
T Consensus 177 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiw 206 (288)
T cd05093 177 --------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVW 206 (288)
T ss_pred --------------------------------------------------ecCCCCCccccccCHHHhccCCCCchhhHH
Confidence 000011456789999999888899999999
Q ss_pred hHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 257 SlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||||++|||++ ||....... ....+.....++.....++.+.+|+.+||.++|.+|||+.+++.
T Consensus 207 slG~il~~l~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 207 SLGVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999996 554443333 33333333333333345678899999999999999999999865
No 338
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93 E-value=2.2e-26 Score=248.35 Aligned_cols=199 Identities=18% Similarity=0.180 Sum_probs=151.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------CCCcChHHHHHHHHHHHH
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVE 93 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~ 93 (886)
..+...+|++++.+++ ++.. .+..++++|| .+++|.+++... ...+++..++.++.||+.
T Consensus 60 ~~~~~l~h~~iv~~~~-~~~~---~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~ 135 (283)
T cd05091 60 MMRSRLQHPNIVCLLG-VVTK---EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAA 135 (283)
T ss_pred HHHhcCCCCCcCeEEE-EEcC---CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHH
Confidence 3445567888888776 4433 3567888888 788999998421 234788899999999999
Q ss_pred HHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccccccccc
Q 002736 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (886)
Q Consensus 94 ~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 173 (886)
||.|||++||+||||||+||+++.++.+|++|||+++.........
T Consensus 136 aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---------------------------------- 181 (283)
T cd05091 136 GMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK---------------------------------- 181 (283)
T ss_pred HHHHHHHcCccccccchhheEecCCCceEecccccccccccchhee----------------------------------
Confidence 9999999999999999999999999999999999985432110000
Q ss_pred ccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCccc
Q 002736 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (886)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~s 253 (886)
......+++.|+|||.+.+..++.++
T Consensus 182 ------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 207 (283)
T cd05091 182 ------------------------------------------------------LMGNSLLPIRWMSPEAIMYGKFSIDS 207 (283)
T ss_pred ------------------------------------------------------eccCccCCccccCHHHHhcCCCCcch
Confidence 00011456789999999888899999
Q ss_pred ccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 254 DIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||||||++|||++ ||... ........+......+.....+..+.+|+.+||+.+|.+||++.++++
T Consensus 208 Dv~slG~~l~el~~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 208 DIWSYGVVLWEVFSYGLQPYCGY-SNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred hHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99999999999997 55433 333444444444444444556677889999999999999999999986
No 339
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93 E-value=3.8e-26 Score=247.19 Aligned_cols=198 Identities=17% Similarity=0.169 Sum_probs=149.1
Q ss_pred ccccCCCCCCccccccccCCceEEEEeeCCcchhhhhc----CCCCCcChHHHHHHHHHHHHHHHhhccc-CeeecccCC
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRP 110 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~----~~~~~l~~~~~~~i~~qi~~~l~~lHs~-giiHrDlkP 110 (886)
+|++++.+++ ++.+ .+..+++|||.+.+|.++.. .....+++..+..++.||+.||+|||+. ||+||||||
T Consensus 61 ~~~~iv~~~~-~~~~---~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp 136 (288)
T cd06616 61 DCPYIVKFYG-ALFR---EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKP 136 (288)
T ss_pred CCCCEeeeee-EEec---CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCH
Confidence 4888888777 4432 45678999998777765432 2235789999999999999999999975 999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.+|++|||++.......
T Consensus 137 ~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------------ 162 (288)
T cd06616 137 SNILLDRNGNIKLCDFGISGQLVDSI------------------------------------------------------ 162 (288)
T ss_pred HHEEEccCCcEEEeecchhHHhccCC------------------------------------------------------
Confidence 99999999999999999985331110
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC---CCCcccccchHHHHHHHHhc
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDIwSlGvil~eLl~ 267 (886)
......|+..|+|||.+.+. .++.++|||||||++|||++
T Consensus 163 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 205 (288)
T cd06616 163 -------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVAT 205 (288)
T ss_pred -------------------------------------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHh
Confidence 00112568889999999876 58999999999999999998
Q ss_pred ---CCCCCchhhHHhHhhccCCCCh----hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||.........+........+. .....++.+.+|+.+||..+|.+|||+.+++.||||...
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 206 GKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred CCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 7755443222222222221111 112356678899999999999999999999999999764
No 340
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93 E-value=3.1e-26 Score=246.37 Aligned_cols=199 Identities=14% Similarity=0.138 Sum_probs=148.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC------CCcChHHHHHHHHHHHHHHHhhcccCe
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~------~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (886)
.+...+|++++..++ ++. ..+.++++||| .|++|.+++.... ..+++..++.++.||+.||.|||++||
T Consensus 62 ~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 137 (277)
T cd05036 62 IMSKFNHQNIVRLIG-VSF---ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHF 137 (277)
T ss_pred HHHhCCCCCEeeEEE-EEc---cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 445567888888776 333 34567889998 7899999995432 257899999999999999999999999
Q ss_pred eecccCCcceeeccCC---ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 104 VVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 104 iHrDlkP~NIll~~~~---~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
+||||||+||+++..+ .+|++|||+++.........
T Consensus 138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------- 176 (277)
T cd05036 138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYR----------------------------------------- 176 (277)
T ss_pred eecccchheEEEeccCCCcceEeccCccccccCCcccee-----------------------------------------
Confidence 9999999999998654 59999999986542110000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
.......+..|+|||.+.+..++.++|||||||
T Consensus 177 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~ 209 (277)
T cd05036 177 -----------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV 209 (277)
T ss_pred -----------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHH
Confidence 000012345699999998888999999999999
Q ss_pred HHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 261 il~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
++|||++ ||...... ..+..+.....+..+...++.+.+++.+||..+|.+||++.++++|
T Consensus 210 il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 210 LLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999996 66543332 2333333322233334456778899999999999999999999875
No 341
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93 E-value=4e-26 Score=246.60 Aligned_cols=201 Identities=17% Similarity=0.239 Sum_probs=148.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ ++. ....++++||| .+++|..++... ..+++..++.++.||+.||.|||++||+||||
T Consensus 52 ~~l~~~~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl 126 (286)
T cd07847 52 RMLKQLKHPNLVNLIE-VFR---RKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDV 126 (286)
T ss_pred HHHHhCCCCCEeeeee-EEe---eCCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 3455567888888766 443 34578899999 666666666443 56899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++........
T Consensus 127 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 155 (286)
T cd07847 127 KPENILITKQGQIKLCDFGFARILTGPGD--------------------------------------------------- 155 (286)
T ss_pred ChhhEEEcCCCcEEECccccceecCCCcc---------------------------------------------------
Confidence 99999999999999999999854321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~ 267 (886)
......++.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~ 196 (286)
T cd07847 156 ---------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT 196 (286)
T ss_pred ---------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh
Confidence 0001256888999999876 458999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhc---c-----------------CCCC---------hhhhccChhhHHHHHHccCCCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLR---H-----------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~---~-----------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps 315 (886)
||.........+.... . ...+ ......++.+.+|+.+||.++|.+||+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 276 (286)
T cd07847 197 GQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS 276 (286)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC
Confidence 6644333222211100 0 0000 011234566789999999999999999
Q ss_pred HHHHhcCCCC
Q 002736 316 MGELLQSEFL 325 (886)
Q Consensus 316 ~~eil~h~~~ 325 (886)
+.|++.||||
T Consensus 277 ~~eil~~~~f 286 (286)
T cd07847 277 CEELLEHPYF 286 (286)
T ss_pred HHHHhcCCCC
Confidence 9999999997
No 342
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.93 E-value=3.9e-26 Score=247.74 Aligned_cols=194 Identities=17% Similarity=0.197 Sum_probs=149.7
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---------------CCCCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---------------~~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
+|++++..++ +|. ..+.++++||| .+++|.+++.. ....+++..++.++.||+.||+|||
T Consensus 74 ~h~~i~~~~~-~~~---~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 149 (293)
T cd05053 74 KHKNIINLLG-VCT---QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA 149 (293)
T ss_pred CCCCeeeEEE-EEc---CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 6888888766 554 34578999998 88899999853 2356899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+||+++.++.+|++|||+++.........
T Consensus 150 ~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~---------------------------------------- 189 (293)
T cd05053 150 SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYR---------------------------------------- 189 (293)
T ss_pred HCCccccccceeeEEEcCCCeEEeCcccccccccccccee----------------------------------------
Confidence 9999999999999999999999999999986542211000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 190 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 221 (293)
T cd05053 190 ------------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 221 (293)
T ss_pred ------------------------------------------------ccCCCCCCccccCHHHhccCCcCcccceeehh
Confidence 00001235569999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
|++|||++ ||.... .......+.....++......+.+.+|+.+||.++|.+|||+.|++++
T Consensus 222 ~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 222 VLLWEIFTLGGSPYPGIP-VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred hHHHHHhcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 99999986 664333 333344444444444444566788899999999999999999999873
No 343
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.93 E-value=3.4e-26 Score=248.25 Aligned_cols=202 Identities=19% Similarity=0.236 Sum_probs=150.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+....|++++...+ ++... ..+.+|++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 57 ~l~~l~h~ni~~~~~-~~~~~-~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p 134 (293)
T cd07843 57 ILLKLQHPNIVTVKE-VVVGS-NLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKT 134 (293)
T ss_pred HHHhcCCCCEEEEEE-EEEec-CCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCH
Confidence 344456888877655 44332 2378999999977899999966555789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.+|++|||++........
T Consensus 135 ~nili~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 161 (293)
T cd07843 135 SNLLLNNRGILKICDFGLAREYGSPLK----------------------------------------------------- 161 (293)
T ss_pred HHEEECCCCcEEEeecCceeeccCCcc-----------------------------------------------------
Confidence 999999999999999998854422100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~-- 267 (886)
......+++.|+|||.+.+.. ++.++|||||||++|||++
T Consensus 162 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (293)
T cd07843 162 -------------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204 (293)
T ss_pred -------------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCC
Confidence 001125678899999987654 6899999999999999999
Q ss_pred -CCCCCchhhHHhHhhccC-------------------------C----CChhhhc--cChhhHHHHHHccCCCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHR-------------------------V----LPPQLLL--KFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-------------------------~----~~~~~~~--~~~~~~~li~~~L~~dP~~Rps 315 (886)
||...... .....+... . ....+.. ..+.+.++|.+||+.+|++|||
T Consensus 205 ~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t 283 (293)
T cd07843 205 PLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS 283 (293)
T ss_pred CCCCCCChH-HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC
Confidence 55433222 111111000 0 0011111 2456779999999999999999
Q ss_pred HHHHhcCCCC
Q 002736 316 MGELLQSEFL 325 (886)
Q Consensus 316 ~~eil~h~~~ 325 (886)
+.|+++||||
T Consensus 284 ~~ell~~~~f 293 (293)
T cd07843 284 AEDALKHPYF 293 (293)
T ss_pred HHHHhcCCCC
Confidence 9999999997
No 344
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93 E-value=5.8e-26 Score=244.24 Aligned_cols=199 Identities=15% Similarity=0.194 Sum_probs=152.8
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
..|++++..++ ++. ....++++||| .|++|.+++.. ..+++..++.++.||+.||.|||++||+|+||+|+||
T Consensus 59 ~~~~~vi~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni 132 (277)
T cd06917 59 SQPPNITKYYG-SYL---KGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANI 132 (277)
T ss_pred CCCCCeeeEee-eee---eCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHE
Confidence 45888888666 443 34678899998 78999999855 3689999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
+++.++.++++|||++........
T Consensus 133 ~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------------- 156 (277)
T cd06917 133 LVTNTGNVKLCDFGVAALLNQNSS-------------------------------------------------------- 156 (277)
T ss_pred EEcCCCCEEEccCCceeecCCCcc--------------------------------------------------------
Confidence 999999999999998854321100
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc---CC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PF 269 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~---pf 269 (886)
......|+..|+|||.+.+. .++.++|+|||||++|+|++ ||
T Consensus 157 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~ 202 (277)
T cd06917 157 ----------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPY 202 (277)
T ss_pred ----------------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCC
Confidence 00112678889999998754 47899999999999999999 66
Q ss_pred CCCchhhHHhHhhccCCCChhhh-ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 270 STGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
......... ..+.....+.... ...+.+.+++.+||..||.+||++.+++.|+||.....
T Consensus 203 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~ 263 (277)
T cd06917 203 SDVDAFRAM-MLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSK 263 (277)
T ss_pred CCCChhhhh-hccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcccc
Confidence 544332222 2222222222222 24567889999999999999999999999999976543
No 345
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.93 E-value=1.2e-23 Score=233.40 Aligned_cols=318 Identities=15% Similarity=0.204 Sum_probs=253.5
Q ss_pred ccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEec
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (886)
Q Consensus 536 ~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~ 615 (886)
.+.|+..|.+++|++.+++++.+++ ++...|+++.-+|--+.+|.|..+|+|.||++.. ...+..+.
T Consensus 175 IvvGs~~G~lql~Nvrt~K~v~~f~-----~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~--------dkil~sFk 241 (910)
T KOG1539|consen 175 IVVGSSQGRLQLWNVRTGKVVYTFQ-----EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKF--------DKILMSFK 241 (910)
T ss_pred EEEeecCCcEEEEEeccCcEEEEec-----ccccceeEeccCCcceEEEEeccCceEEEEEccc--------CcEEEEEE
Confidence 4678999999999999999998884 5678999999999999999999999999999975 24456667
Q ss_pred CC-CCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEec-ccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchh
Q 002736 616 SR-SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (886)
Q Consensus 616 ~~-~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~ 693 (886)
+. +.|+.++|.-+...++|+|+..|.+.+||++..+....+. .|.+.|....|.| ....+++.+.|.++++|=..++
T Consensus 242 ~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-~epVl~ta~~DnSlk~~vfD~~ 320 (910)
T KOG1539|consen 242 QDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-GEPVLVTAGADNSLKVWVFDSG 320 (910)
T ss_pred ccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecC-CCceEeeccCCCceeEEEeeCC
Confidence 75 9999999998666789999999999999999887665554 6778888888886 6677888888887777733210
Q ss_pred hh-----------------------------------------------hhccCc---------------------e---
Q 002736 694 IL-----------------------------------------------LLHLGV---------------------S--- 702 (886)
Q Consensus 694 ~~-----------------------------------------------~~~~~~---------------------~--- 702 (886)
.. ...++. +
T Consensus 321 dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~ 400 (910)
T KOG1539|consen 321 DGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVE 400 (910)
T ss_pred CCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCccee
Confidence 00 000000 0
Q ss_pred -----------------------------------eeeeecC------CCeEEEEEeCCCCcEEEEEeCCCeEEEEecCC
Q 002736 703 -----------------------------------IGTIKTK------ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN 741 (886)
Q Consensus 703 -----------------------------------~~~~~~~------~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~ 741 (886)
...+... ..+.+|+.++- |+..+.|+..|+|-+|++..
T Consensus 401 fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C-GNF~~IG~S~G~Id~fNmQS 479 (910)
T KOG1539|consen 401 FAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC-GNFVFIGYSKGTIDRFNMQS 479 (910)
T ss_pred eecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEecc-CceEEEeccCCeEEEEEccc
Confidence 0111112 45788899988 89999999999999999998
Q ss_pred CCcceEEE---ecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCcc------------------------------
Q 002736 742 SKIPLCTL---IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR------------------------------ 787 (886)
Q Consensus 742 ~~~~~~~~---~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~------------------------------ 787 (886)
+-. ...+ ..|..+|++++.. -++.++|++.+|.+++||.+.....
T Consensus 480 Gi~-r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I 558 (910)
T KOG1539|consen 480 GIH-RKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSI 558 (910)
T ss_pred Cee-ecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeE
Confidence 864 4555 5899999999985 6678999999999999999764310
Q ss_pred -----ccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEE
Q 002736 788 -----VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVC 862 (886)
Q Consensus 788 -----~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~ 862 (886)
...+.++.|.||++.|+.++|||||++|++++.|++|++||+.++..+-.+.+. .++.++.
T Consensus 559 ~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd--------------~~~~sls 624 (910)
T KOG1539|consen 559 RVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVD--------------SPCTSLS 624 (910)
T ss_pred EEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecC--------------CcceeeE
Confidence 011245678899999999999999999999999999999999999888766543 3478999
Q ss_pred EccCCCcEEEEEeCC-CCEEEEE
Q 002736 863 WRGQSSNTLVAANSS-GNIKILE 884 (886)
Q Consensus 863 ~s~~~~~~l~s~~~d-g~I~iw~ 884 (886)
|+|+|+ +|||+..| .-|++|.
T Consensus 625 ~SPngD-~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 625 FSPNGD-FLATVHVDQNGIYLWS 646 (910)
T ss_pred ECCCCC-EEEEEEecCceEEEEE
Confidence 999999 99999988 7799995
No 346
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.93 E-value=4e-26 Score=243.32 Aligned_cols=211 Identities=18% Similarity=0.187 Sum_probs=157.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..+. .+ ...+.+|++||| .|++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||+
T Consensus 46 ~l~~~~h~~i~~~~~-~~---~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 46 ILSQAQSPYVVKLYY-SF---QGKKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred HHHhCCCcchhHHHH-he---ecCcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 344556888877665 22 235678899999 688999999664 378999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++...........
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------- 151 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQINL------------------------------------------------- 151 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCccccc-------------------------------------------------
Confidence 9999999999999999999854321100000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
...........++..|+|||.+.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 198 (265)
T cd05579 152 ---------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGI 198 (265)
T ss_pred ---------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence 000001112367888999999988889999999999999999998
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH---HHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~---~eil~h~~~~~~ 328 (886)
||..................++.....++.+.+|+.+||+.+|.+|||+ .++|+||||...
T Consensus 199 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 199 PPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred CCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 7755444333322222222222222236788899999999999999999 999999999854
No 347
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.93 E-value=3.6e-26 Score=245.92 Aligned_cols=203 Identities=17% Similarity=0.179 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++...+ ++. ..+.+|++||| .|++|.+++.+.. ..+++.+++.++.||+.||.|||++||+|+||
T Consensus 46 ~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di 121 (277)
T cd05577 46 ILEKVSSRFIVSLAY-AFE---TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDL 121 (277)
T ss_pred HHHhCCCCCEeeeee-EEe---cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 344556888877665 332 34678999999 7899999995543 36899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
+|+||+++.++.++++|||.+.......
T Consensus 122 ~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------------- 149 (277)
T cd05577 122 KPENVLLDDHGNVRISDLGLAVELKGGK---------------------------------------------------- 149 (277)
T ss_pred CHHHEEECCCCCEEEccCcchhhhccCC----------------------------------------------------
Confidence 9999999999999999999874321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 150 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g 190 (277)
T cd05577 150 ---------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAG 190 (277)
T ss_pred ---------------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhC
Confidence 0001146778999999988889999999999999999998
Q ss_pred --CCCCCchh---hHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 268 --PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 268 --pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
||...... ........ ...........+.+.++|.+||+.+|.+|| ++.++++||||....
T Consensus 191 ~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 191 RSPFRQRKEKVEKEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred CCCCCCCcccccHHHHHhccc-cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 77443321 11111111 111122233567889999999999999999 888899999997643
No 348
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=2.3e-26 Score=252.43 Aligned_cols=208 Identities=18% Similarity=0.191 Sum_probs=151.4
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCC----CCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
...+...+|++++..++ .+.+. ..+.++++|||.+++|.+++... ...+++..++.++.||+.||.|||++||+
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 130 (316)
T cd07842 53 IALLRELKHENVVSLVE-VFLEH-ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVL 130 (316)
T ss_pred HHHHHhcCCCCccceEE-EEeCC-CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 34556678898888777 55432 34678999999888888877422 23689999999999999999999999999
Q ss_pred ecccCCcceeecc----CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 105 VHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 105 HrDlkP~NIll~~----~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
||||||+||+++. .+.+|++|||++.........
T Consensus 131 h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 168 (316)
T cd07842 131 HRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP------------------------------------------ 168 (316)
T ss_pred eCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc------------------------------------------
Confidence 9999999999999 899999999998643221000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlG 259 (886)
........++.+|+|||.+.+. .++.++||||||
T Consensus 169 ---------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 203 (316)
T cd07842 169 ---------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG 203 (316)
T ss_pred ---------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHH
Confidence 0000112678899999988774 489999999999
Q ss_pred HHHHHHhc---CCCCCchhh--------HHhHhh----------------------------ccCCCC-hh-------hh
Q 002736 260 VLLFELFC---PFSTGEEKT--------RTMSSL----------------------------RHRVLP-PQ-------LL 292 (886)
Q Consensus 260 vil~eLl~---pf~~~~~~~--------~~~~~~----------------------------~~~~~~-~~-------~~ 292 (886)
|+||||++ ||....... ..+..+ .....+ .. ..
T Consensus 204 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
T cd07842 204 CIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHK 283 (316)
T ss_pred HHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhcc
Confidence 99999999 664332211 000000 000001 00 00
Q ss_pred ccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 293 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 293 ~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
...+.+.+++.+||.+||++|||+.|+++||||
T Consensus 284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 284 KPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 334567799999999999999999999999998
No 349
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.93 E-value=3.7e-26 Score=245.81 Aligned_cols=199 Identities=14% Similarity=0.098 Sum_probs=149.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC---------CCcChHHHHHHHHHHHHHHHhhc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
..+...+|++++..++ ++. ....++++||| .+++|.+++.+.. ..++...+..++.||+.||.|||
T Consensus 61 ~~l~~l~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 136 (277)
T cd05062 61 SVMKEFNCHHVVRLLG-VVS---QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN 136 (277)
T ss_pred HHHHhCCCCCeeeEEE-EEc---CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3445567888888766 443 34568889998 8899999985421 23567889999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
+.||+||||||+||+++.++.++++|||+++.........
T Consensus 137 ~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------------- 176 (277)
T cd05062 137 ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR---------------------------------------- 176 (277)
T ss_pred HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceee----------------------------------------
Confidence 9999999999999999999999999999985432110000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 177 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 208 (277)
T cd05062 177 ------------------------------------------------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 208 (277)
T ss_pred ------------------------------------------------cCCCCccCHhhcChhHhhcCCcCchhHHHHHH
Confidence 00001456789999999988899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||.... .............++.....++.+.+++.+||+.+|.+||++.|+++
T Consensus 209 ~~l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 273 (277)
T cd05062 209 VVLWEIATLAEQPYQGMS-NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 273 (277)
T ss_pred HHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999996 554333 33333333333333333445677889999999999999999999986
No 350
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=3.6e-26 Score=253.69 Aligned_cols=206 Identities=16% Similarity=0.248 Sum_probs=155.1
Q ss_pred eeecccccccCCCCCCcccccccc---CCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
..+...+|++++...+ ++..... ...++++|||.|++|.+++.. ..+++..++.++.||+.||.|||++||+||
T Consensus 66 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~ 142 (343)
T cd07880 66 RLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHR 142 (343)
T ss_pred HHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 3455668888887766 4433222 235789999999999998854 468999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++.++.++++|||++......
T Consensus 143 dlkp~Nill~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 171 (343)
T cd07880 143 DLKPGNLAVNEDCELKILDFGLARQTDSE--------------------------------------------------- 171 (343)
T ss_pred CCCHHHEEEcCCCCEEEeecccccccccC---------------------------------------------------
Confidence 99999999999999999999998533111
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eL 265 (886)
.....++++|+|||.+.+ ..++.++|||||||++|+|
T Consensus 172 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l 209 (343)
T cd07880 172 ------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEM 209 (343)
T ss_pred ------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 001256889999999876 3488999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccC-------------------------CC----ChhhhccChhhHHHHHHccCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHR-------------------------VL----PPQLLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~-------------------------~~----~~~~~~~~~~~~~li~~~L~~dP~~R 313 (886)
++ ||............+... .. ........+.+.+++.+||+.||.+|
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 289 (343)
T cd07880 210 LTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESR 289 (343)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhC
Confidence 99 665443322222111100 00 01112345667899999999999999
Q ss_pred CCHHHHhcCCCCCCCcCc
Q 002736 314 PKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 314 ps~~eil~h~~~~~~~~~ 331 (886)
||+.++++||||......
T Consensus 290 ~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 290 ITAAEALAHPYFEEFHDP 307 (343)
T ss_pred CCHHHHhcCccHhhhcCc
Confidence 999999999999875443
No 351
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.93 E-value=2.8e-26 Score=254.01 Aligned_cols=211 Identities=16% Similarity=0.198 Sum_probs=153.8
Q ss_pred ceeecccccccCCCCCCcccccc--ccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 29 GVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
...+...+|++++..++ ++... ......+++|||.+++|.+++.. ..+++..++.++.||+.||.|||++||+||
T Consensus 54 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~ 130 (336)
T cd07849 54 IKILRRFKHENIIGILD-IIRPPSFESFNDVYIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHR 130 (336)
T ss_pred HHHHHhCCCCCcCchhh-eeecccccccceEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 33455566888887766 44322 23346799999988899988854 468999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++..+.+|++|||++..........
T Consensus 131 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------------- 163 (336)
T cd07849 131 DLKPSNLLLNTNCDLKICDFGLARIADPEHDHT----------------------------------------------- 163 (336)
T ss_pred CCCHHHEEECCCCCEEECcccceeecccccccc-----------------------------------------------
Confidence 999999999999999999999985432110000
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eL 265 (886)
.......|+++|+|||.+.+ ..++.++|||||||++|||
T Consensus 164 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el 203 (336)
T cd07849 164 ----------------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM 203 (336)
T ss_pred ----------------------------------------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence 00011367999999998765 4589999999999999999
Q ss_pred hc---CCCCCchhhHHhHhh---ccCC---------------------C-C-----hhhhccChhhHHHHHHccCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSL---RHRV---------------------L-P-----PQLLLKFPKEASFCLWLLHPEPSG 312 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~---~~~~---------------------~-~-----~~~~~~~~~~~~li~~~L~~dP~~ 312 (886)
++ ||...... ..+..+ .... . + .......+.+.+|+.+||+.+|.+
T Consensus 204 ~~G~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 282 (336)
T cd07849 204 LSNRPLFPGKDYL-HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHK 282 (336)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhh
Confidence 99 56433211 111100 0000 0 0 011234567889999999999999
Q ss_pred CCCHHHHhcCCCCCCCcC
Q 002736 313 RPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 313 Rps~~eil~h~~~~~~~~ 330 (886)
|||+.|+++||||.....
T Consensus 283 Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 283 RITVEEALAHPYLEQYHD 300 (336)
T ss_pred CcCHHHHhcCccccccCC
Confidence 999999999999986543
No 352
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93 E-value=8e-26 Score=241.11 Aligned_cols=205 Identities=22% Similarity=0.279 Sum_probs=155.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+ ...+.+++++|| .+++|.+++.+. ..+++..++.++.||+.||.|||+.||+|+||
T Consensus 51 ~~~~~l~~~~i~~~~~-~~---~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl 125 (264)
T cd06626 51 KVLELLKHPNLVKYYG-VE---VHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDI 125 (264)
T ss_pred HHHHhCCCCChhheee-eE---ecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 3455567888887776 33 235678899999 789999999654 45799999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
+|+||+++..+.+|++|||++...........
T Consensus 126 ~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~------------------------------------------------ 157 (264)
T cd06626 126 KPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG------------------------------------------------ 157 (264)
T ss_pred CHHHEEECCCCCEEEcccccccccCCCCCccc------------------------------------------------
Confidence 99999999999999999999865422210000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC---CCcccccchHHHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFEL 265 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDIwSlGvil~eL 265 (886)
.......++..|+|||.+.+.. ++.++|||||||++|||
T Consensus 158 --------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l 199 (264)
T cd06626 158 --------------------------------------EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM 199 (264)
T ss_pred --------------------------------------ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHH
Confidence 0000125677899999998766 89999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCCh--hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
++ ||............+.....+. ......+.+.+|+.+||+.+|.+||++.+++.|||+
T Consensus 200 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 200 ATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 98 7755433333322222222222 222336778899999999999999999999999996
No 353
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93 E-value=5.9e-26 Score=246.75 Aligned_cols=200 Identities=18% Similarity=0.204 Sum_probs=152.5
Q ss_pred cccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecccCCcce
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCF 113 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrDlkP~NI 113 (886)
.+|++++..++ .|.+ ...++++|||.+++|..++......+++..+..++.||+.||.|||+ .||+||||+|+||
T Consensus 71 ~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~ni 146 (296)
T cd06618 71 HDCPYIVKCYG-YFIT---DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNI 146 (296)
T ss_pred cCCCchHhhhe-eeec---CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHE
Confidence 46888888777 4433 45689999998888888876545678999999999999999999997 5999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
+++.++.+||+|||++.......
T Consensus 147 ll~~~~~~kL~dfg~~~~~~~~~--------------------------------------------------------- 169 (296)
T cd06618 147 LLDASGNVKLCDFGISGRLVDSK--------------------------------------------------------- 169 (296)
T ss_pred EEcCCCCEEECccccchhccCCC---------------------------------------------------------
Confidence 99999999999999884331110
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC----CCcccccchHHHHHHHHhc--
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 170 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 170 ----------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred ----------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 000114577899999987653 8899999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCC--hhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCc
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 329 (886)
||..................+ +........+.+|+.+||..||.+||++.++++||||....
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 216 FPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred CCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 775543333333322222211 11123456788999999999999999999999999998643
No 354
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.93 E-value=1.3e-24 Score=211.36 Aligned_cols=237 Identities=21% Similarity=0.342 Sum_probs=205.8
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEE--EecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLT--EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~--~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
+|..+|.+|+|+. ++..|++|+.|+++.+|+++...... .+.+|.+.|-.++|+|..+..|++++.|.+|++||+++
T Consensus 18 ~~~~~v~Sv~wn~-~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~ 96 (313)
T KOG1407|consen 18 GHVQKVHSVAWNC-DGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS 96 (313)
T ss_pred hhhhcceEEEEcc-cCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence 5778999999998 79999999999999999998775443 34689999999999998999999999999999999999
Q ss_pred hhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEE
Q 002736 693 AILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAS 771 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs 771 (886)
++++..+..+..-.-+.|+|+ +.++++|+.|..|.+.|.|+.+. +... .....+.-+.|. ++++++...
T Consensus 97 -------~k~~~~i~~~~eni~i~wsp~-g~~~~~~~kdD~it~id~r~~~~-~~~~-~~~~e~ne~~w~~~nd~Fflt~ 166 (313)
T KOG1407|consen 97 -------GKCTARIETKGENINITWSPD-GEYIAVGNKDDRITFIDARTYKI-VNEE-QFKFEVNEISWNNSNDLFFLTN 166 (313)
T ss_pred -------CcEEEEeeccCcceEEEEcCC-CCEEEEecCcccEEEEEecccce-eehh-cccceeeeeeecCCCCEEEEec
Confidence 888888888887788999999 89999999999999999998873 4333 344567888887 777887777
Q ss_pred CCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCcc
Q 002736 772 TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPET 851 (886)
Q Consensus 772 ~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 851 (886)
..|+|.|-..... +|+.++++|.....|+.|+|+|+|+|+||.|-.+.+||+..--++..+
T Consensus 167 GlG~v~ILsypsL------kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i------------- 227 (313)
T KOG1407|consen 167 GLGCVEILSYPSL------KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI------------- 227 (313)
T ss_pred CCceEEEEecccc------ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee-------------
Confidence 7899999998866 789999999999999999999999999999999999998865444333
Q ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCCEEE
Q 002736 852 DDAAQFISSVCWRGQSSNTLVAANSSGNIKI 882 (886)
Q Consensus 852 ~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~i 882 (886)
.-+.-+|..+.|+-+|. +||+|+.|..|-|
T Consensus 228 sRldwpVRTlSFS~dg~-~lASaSEDh~IDI 257 (313)
T KOG1407|consen 228 SRLDWPVRTLSFSHDGR-MLASASEDHFIDI 257 (313)
T ss_pred ccccCceEEEEeccCcc-eeeccCccceEEe
Confidence 33456799999999999 9999999998865
No 355
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93 E-value=3.4e-26 Score=246.92 Aligned_cols=200 Identities=22% Similarity=0.212 Sum_probs=153.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC----------------CCCcChHHHHHHHHHHH
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLHIFRQIV 92 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~----------------~~~l~~~~~~~i~~qi~ 92 (886)
..+....|++++..++ ++. ..+..+++||| .+++|.+++... ...+++.++..++.||+
T Consensus 59 ~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 134 (283)
T cd05090 59 SLMAELHHPNIVCLLG-VVT---QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIA 134 (283)
T ss_pred HHHhhCCCCCeeeEEE-EEe---cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHH
Confidence 3455567888888666 332 34678899999 788999998422 13478899999999999
Q ss_pred HHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccc
Q 002736 93 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (886)
Q Consensus 93 ~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 172 (886)
.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 135 ~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~---------------------------------- 180 (283)
T cd05090 135 AGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY---------------------------------- 180 (283)
T ss_pred HHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcce----------------------------------
Confidence 9999999999999999999999999999999999998643211000
Q ss_pred cccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcc
Q 002736 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (886)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~ 252 (886)
.......++..|+|||.+.+..++.+
T Consensus 181 ------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (283)
T cd05090 181 ------------------------------------------------------RVQPKSLLPIRWMPPEAIMYGKFSSD 206 (283)
T ss_pred ------------------------------------------------------ecccCCCccceecChHHhccCCCCch
Confidence 00011134667999999988889999
Q ss_pred cccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 253 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 253 sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
+|||||||+||||++ ||.... ....+..+.....++......+.+.+++.+||+.+|.+||++.+++++
T Consensus 207 ~Dv~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 207 SDIWSFGVVLWEIFSFGLQPYYGFS-NQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred hhhHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 999999999999997 665443 334455555555555555667888999999999999999999999864
No 356
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.93 E-value=6.9e-26 Score=244.01 Aligned_cols=197 Identities=17% Similarity=0.169 Sum_probs=151.5
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-------------CCCcChHHHHHHHHHHHHHHHh
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIFRQIVEIVYA 97 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~~ 97 (886)
+....|++++..++ ++.. ...++++||| .|++|.++|... ...+++.++..++.||+.||.|
T Consensus 62 l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~ 137 (280)
T cd05049 62 LTNFQHENIVKFYG-VCTE---GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVY 137 (280)
T ss_pred HHhcCCCCchheee-EEec---CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence 44557888888776 4443 3678899998 899999999543 1357889999999999999999
Q ss_pred hcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 98 lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
||++||+||||||+||+++.++.+|++|||++..........
T Consensus 138 lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~-------------------------------------- 179 (280)
T cd05049 138 LASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYR-------------------------------------- 179 (280)
T ss_pred HhhCCeeccccccceEEEcCCCeEEECCcccceecccCccee--------------------------------------
Confidence 999999999999999999999999999999985432110000
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
......++..|+|||.+.+..++.++||||
T Consensus 180 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 209 (280)
T cd05049 180 --------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWS 209 (280)
T ss_pred --------------------------------------------------cCCCCcccceecChhhhccCCcchhhhHHH
Confidence 000114567899999999988999999999
Q ss_pred HHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 258 lGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||++|||++ ||...... .....+.....+......+..+.+++.+||..||.+||++.|+++
T Consensus 210 lG~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 210 FGVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999996 66544433 333334444444444456678889999999999999999999976
No 357
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93 E-value=5.8e-26 Score=244.58 Aligned_cols=197 Identities=15% Similarity=0.095 Sum_probs=149.0
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|++++..++ .|.. ...+++||| .+++|.+++.+....+++.+++.++.||+.||.|||++||+|||||
T Consensus 62 ~l~~~~~~~i~~~~~-~~~~----~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlk 136 (279)
T cd05109 62 VMAGVGSPYVCRLLG-ICLT----STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLA 136 (279)
T ss_pred HHHhcCCCCCceEEE-EEcC----CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 344567788877665 5542 234566776 8899999997655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||+..++.+|++|||+++.........
T Consensus 137 p~Nil~~~~~~~kL~dfG~~~~~~~~~~~~-------------------------------------------------- 166 (279)
T cd05109 137 ARNVLVKSPNHVKITDFGLARLLDIDETEY-------------------------------------------------- 166 (279)
T ss_pred cceEEEcCCCcEEECCCCceeeccccccee--------------------------------------------------
Confidence 999999999999999999986442110000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 167 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g 208 (279)
T cd05109 167 --------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFG 208 (279)
T ss_pred --------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence 0000123567999999988889999999999999999986
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+.....++.....++.+.+++.+||..||.+||++.+++.
T Consensus 209 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 209 AKPYDGIP-AREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CCCCCCCC-HHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 553332 23233334443344444556778889999999999999999999985
No 358
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=4e-26 Score=250.32 Aligned_cols=213 Identities=17% Similarity=0.171 Sum_probs=152.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++..++ ++. ..+.++++||| .+++|.+++.+. ...+++..++.+++||+.||.|||++||+|||
T Consensus 51 ~~l~~l~h~~i~~~~~-~~~---~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~d 126 (314)
T cd08216 51 ITSRQLQHPNILPYVT-SFI---VDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRS 126 (314)
T ss_pred HHHHhcCCcchhhhhh-eee---cCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 3444557888888766 332 34568889998 778999999643 34689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.+|++|||.+..........
T Consensus 127 lk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------------------------------------------ 158 (314)
T cd08216 127 VKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------------------------------------------ 158 (314)
T ss_pred CCcceEEEecCCceEEecCccceeeccccccc------------------------------------------------
Confidence 99999999999999999999875331110000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC--CCCcccccchHHHHHHHH
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDIwSlGvil~eL 265 (886)
...........++..|+|||.+.+. .++.++|||||||++|||
T Consensus 159 -----------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el 203 (314)
T cd08216 159 -----------------------------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACEL 203 (314)
T ss_pred -----------------------------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHH
Confidence 0000000112567889999998763 488999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCC--------CC------------------------hhhhccChhhHHHHHHccCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRV--------LP------------------------PQLLLKFPKEASFCLWLLHPEP 310 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~--------~~------------------------~~~~~~~~~~~~li~~~L~~dP 310 (886)
++ ||............+.... .+ .......+++.+|+.+||.+||
T Consensus 204 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 283 (314)
T cd08216 204 ANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDP 283 (314)
T ss_pred HhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCC
Confidence 98 7765544333322221110 00 0001112456789999999999
Q ss_pred CCCCCHHHHhcCCCCCCCc
Q 002736 311 SGRPKMGELLQSEFLNEPR 329 (886)
Q Consensus 311 ~~Rps~~eil~h~~~~~~~ 329 (886)
.+|||+.++|+||||....
T Consensus 284 ~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 284 ESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred CcCcCHHHHhcCchHhhhc
Confidence 9999999999999998654
No 359
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=6.3e-25 Score=211.68 Aligned_cols=250 Identities=19% Similarity=0.294 Sum_probs=195.5
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCc---eEEEEecccCCcEEEEEEc-cCCCCEEEEEeCCCcEEEEeC
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFS-SADPTLLASGSDDGSVKLWSI 690 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~---~~~~~~~~h~~~v~~v~~~-p~~~~~l~sgs~Dg~v~lwd~ 690 (886)
.|..-|..+..+- -+..|||++.|++|+|+.++.+ +.+.++.+|.++||.+.|. |.-|++||+|+.||.|.||.-
T Consensus 9 ~H~D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 9 QHEDMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 4666666665553 4889999999999999999764 5688999999999999995 556899999999999999998
Q ss_pred chhhhhhccCceeeeeecCCCeEEEEEeCCC-CcEEEEEeCCCeEEEEecCCCC--cceEEEecCCCCeEEEEec----C
Q 002736 691 NQAILLLHLGVSIGTIKTKANVCCVQFPLDS-GRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNKTVSYVKFV----D 763 (886)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~-~~~l~~gs~Dg~I~vwDlr~~~--~~~~~~~~h~~~V~~v~f~----~ 763 (886)
.++.- .+....-.|.+.|++|+|-|.. |-.|++++.||.|.+.+.++.. ........|.-.|++|+|. +
T Consensus 88 ~~g~w----~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 88 ENGRW----TKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred CCCch----hhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCC
Confidence 77311 1111112357889999999974 5679999999999999988752 1233456899999999994 3
Q ss_pred C-----------CEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCC----CEEEEEcCCCcEEEEe
Q 002736 764 A-----------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD----GYVATGSETNEVFVYH 828 (886)
Q Consensus 764 ~-----------~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g----~~lasgs~Dg~v~iwd 828 (886)
| ..|+||+.|+.|+||+.....- ...++|.+|++.|+.|+|.|.- .+||++|.||+|.||.
T Consensus 164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w----~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt 239 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSW----KLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWT 239 (299)
T ss_pred ccccccCcccccceeeccCCccceeeeecCCcch----hhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEE
Confidence 3 4699999999999999987632 3356699999999999999984 3899999999999998
Q ss_pred cCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 829 KAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
.........- .-.+.-...+..+.||..|+ +|+.++.|..|.+|.
T Consensus 240 ~~~e~e~wk~----------tll~~f~~~~w~vSWS~sGn-~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 240 KDEEYEPWKK----------TLLEEFPDVVWRVSWSLSGN-ILAVSGGDNKVTLWK 284 (299)
T ss_pred ecCccCcccc----------cccccCCcceEEEEEecccc-EEEEecCCcEEEEEE
Confidence 7632111110 11122345699999999999 999999999999996
No 360
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93 E-value=5e-26 Score=242.64 Aligned_cols=202 Identities=22% Similarity=0.240 Sum_probs=159.0
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecccC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrDlk 109 (886)
+....|++++..++ ++. ..+..+++||| .|++|.+++... ..+++..+..++.||++||.|||+ +|++|+||+
T Consensus 53 l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~ 127 (264)
T cd06623 53 LRSCESPYVVKCYG-AFY---KEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIK 127 (264)
T ss_pred HHhcCCCCeeeEEE-EEc---cCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCC
Confidence 34455888877666 333 23678889999 779999999654 678999999999999999999999 999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 128 ~~ni~~~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 155 (264)
T cd06623 128 PSNLLINSKGEVKIADFGISKVLENTLD---------------------------------------------------- 155 (264)
T ss_pred HHHEEECCCCCEEEccCccceecccCCC----------------------------------------------------
Confidence 9999999999999999998854321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++||||||+++|+|++
T Consensus 156 --------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~ 197 (264)
T cd06623 156 --------------------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197 (264)
T ss_pred --------------------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 0011256888999999988889999999999999999999
Q ss_pred -CCCCCc--hhhHHhHhhccCCCChhhhc-cChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||.... ........+.....+..... .+..+.+++.+||.++|++||++.++++|||++..
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 198 FPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 665553 33334444444444443334 56778899999999999999999999999999753
No 361
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93 E-value=4.1e-26 Score=252.12 Aligned_cols=211 Identities=18% Similarity=0.219 Sum_probs=156.9
Q ss_pred eecccccccCCCCCCccccccc--cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++...+ ++.+.. ....+|++|||.+++|.+++.+. ..+++..++.++.||+.||.|||++||+|+||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dl 129 (330)
T cd07834 52 LLRHLRHENIIGLLD-ILRPPSPEDFNDVYIVTELMETDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANVIHRDL 129 (330)
T ss_pred HHHhcCCcchhhhhh-hhcccCcccccceEEEecchhhhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 344456888877666 554432 33468999999888999999654 48899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.++++|||++.........
T Consensus 130 kp~nili~~~~~~~L~dfg~~~~~~~~~~~-------------------------------------------------- 159 (330)
T cd07834 130 KPSNILVNSNCDLKICDFGLARGVDPDEDE-------------------------------------------------- 159 (330)
T ss_pred CHHHEEEcCCCCEEEcccCceEeecccccc--------------------------------------------------
Confidence 999999999999999999998543221000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~ 267 (886)
+.......++++|+|||.+.+. .++.++|||||||++|+|++
T Consensus 160 -------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~ 202 (330)
T cd07834 160 -------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLT 202 (330)
T ss_pred -------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHc
Confidence 0001123678999999999887 79999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccC---CC---------------------------ChhhhccChhhHHHHHHccCCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHR---VL---------------------------PPQLLLKFPKEASFCLWLLHPEPSGRP 314 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---~~---------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (886)
||....... .+..+... .. .......++.+.+|+.+||.++|.+||
T Consensus 203 g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 281 (330)
T cd07834 203 RKPLFPGRDYID-QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRI 281 (330)
T ss_pred CCCCcCCCCHHH-HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCC
Confidence 554433221 11111110 00 001122456778999999999999999
Q ss_pred CHHHHhcCCCCCCCcCc
Q 002736 315 KMGELLQSEFLNEPRDS 331 (886)
Q Consensus 315 s~~eil~h~~~~~~~~~ 331 (886)
++.++++||||.....+
T Consensus 282 t~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 282 TADEALAHPYLAQLHDP 298 (330)
T ss_pred CHHHHHhCccHHhhccc
Confidence 99999999999875443
No 362
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-26 Score=249.68 Aligned_cols=203 Identities=21% Similarity=0.249 Sum_probs=150.7
Q ss_pred cccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCC-CcChHHHHHHHHHHHHHHHhhcc
Q 002736 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
|..| ...+++..|+|.+.++| +|.+... ..++|+|| ..|+|.++|..... .++|...++|+.+++.||+|||.
T Consensus 118 F~~E--i~~ls~l~H~Nlv~LlG-yC~e~~~--~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~ 192 (361)
T KOG1187|consen 118 FLNE--VEILSRLRHPNLVKLLG-YCLEGGE--HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHE 192 (361)
T ss_pred HHHH--HHHHhcCCCcCcccEEE-EEecCCc--eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHcc
Confidence 4444 44556666999999877 7765332 68899999 77899999966555 88999999999999999999999
Q ss_pred cC---eeecccCCcceeeccCCceeeeeCCccCCCCC-CccccccccccccccCCCCCCCchhhhhhhcccccccccccC
Q 002736 101 QG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (886)
Q Consensus 101 ~g---iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 176 (886)
.. ||||||||+||||+++.+.|++|||+|+.... ..
T Consensus 193 ~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~---------------------------------------- 232 (361)
T KOG1187|consen 193 GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT---------------------------------------- 232 (361)
T ss_pred CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc----------------------------------------
Confidence 64 99999999999999999999999999943321 10
Q ss_pred CCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeee-ccccceecccccCCCCCCccccc
Q 002736 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDI 255 (886)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~~sDI 255 (886)
..... .||..|+|||.+..+..+.++||
T Consensus 233 ---------------------------------------------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDV 261 (361)
T KOG1187|consen 233 ---------------------------------------------------SVSTTVMGTFGYLAPEYASTGKLTEKSDV 261 (361)
T ss_pred ---------------------------------------------------ceeeecCCCCccCChhhhccCCcCccccc
Confidence 11111 68999999999988889999999
Q ss_pred chHHHHHHHHhc---CCCCCc---hh---hHHhHhhcc----CCCChhhh-ccC------hhhHHHHHHccCCCCCCCCC
Q 002736 256 YRLGVLLFELFC---PFSTGE---EK---TRTMSSLRH----RVLPPQLL-LKF------PKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 256 wSlGvil~eLl~---pf~~~~---~~---~~~~~~~~~----~~~~~~~~-~~~------~~~~~li~~~L~~dP~~Rps 315 (886)
|||||+|.||++ +..... .. .-....+.. ....+.+. ... ..+..+..+|++.+|..||+
T Consensus 262 ySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~ 341 (361)
T KOG1187|consen 262 YSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPT 341 (361)
T ss_pred ccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcC
Confidence 999999999999 333221 11 111112222 12233322 222 22458889999999999999
Q ss_pred HHHHhc
Q 002736 316 MGELLQ 321 (886)
Q Consensus 316 ~~eil~ 321 (886)
|.|+++
T Consensus 342 m~~Vv~ 347 (361)
T KOG1187|consen 342 MSQVVK 347 (361)
T ss_pred HHHHHH
Confidence 999754
No 363
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.93 E-value=9.1e-26 Score=241.21 Aligned_cols=199 Identities=13% Similarity=0.135 Sum_probs=154.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ .+. ..+.++++||| .+++|.+++......+++..++.++.||+.||.|||++||+|+||
T Consensus 57 ~~l~~l~h~~i~~~~~-~~~---~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di 132 (266)
T cd05033 57 SIMGQFDHPNIIRLEG-VVT---KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDL 132 (266)
T ss_pred HHHHhCCCCCcceEeE-EEe---cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 3455667888888776 332 34668899998 788999999766567899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++......... .
T Consensus 133 ~p~nili~~~~~~~l~dfg~~~~~~~~~~~--~----------------------------------------------- 163 (266)
T cd05033 133 AARNILVNSNLVCKVSDFGLSRRLEDSEAT--Y----------------------------------------------- 163 (266)
T ss_pred CcceEEEcCCCCEEECccchhhcccccccc--e-----------------------------------------------
Confidence 999999999999999999998654311000 0
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ---------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~ 204 (266)
T cd05033 164 ---------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSY 204 (266)
T ss_pred ---------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHcc
Confidence 0000133567999999988889999999999999999986
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+......+.....++.+.+++.+||..+|.+||++.++++
T Consensus 205 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 205 GERPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred CCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6644433 3333444433333444456778889999999999999999999986
No 364
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=4.8e-26 Score=241.88 Aligned_cols=194 Identities=15% Similarity=0.118 Sum_probs=147.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ ++.. ....++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++||+||||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 128 (256)
T cd05082 52 VMTQLRHSNLVQLLG-VIVE--EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDL 128 (256)
T ss_pred HHHhCCCCCeeeEEE-EEEc--CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEecccc
Confidence 344557888877665 3221 23567889999 7789999996543 34789999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||+++......
T Consensus 129 kp~nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 156 (256)
T cd05082 129 AARNVLVSEDNVAKVSDFGLTKEASSTQ---------------------------------------------------- 156 (256)
T ss_pred chheEEEcCCCcEEecCCccceeccccC----------------------------------------------------
Confidence 9999999999999999999885321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~ 195 (256)
T cd05082 157 -----------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 195 (256)
T ss_pred -----------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhC
Confidence 00123456999999988889999999999999999996
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+.....+......++.+.+++.+||..+|.+|||+.++++
T Consensus 196 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 196 GRVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 5643332 2233333333333333455678889999999999999999999875
No 365
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93 E-value=8e-26 Score=245.82 Aligned_cols=190 Identities=14% Similarity=0.119 Sum_probs=145.1
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC---------------CCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|++++..++ ++. ..+.++++||| .+++|.++|.+.. ..+++..++.|+.||+.||+|||
T Consensus 61 ~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH 136 (297)
T cd05089 61 HHPNIINLLG-ACE---NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS 136 (297)
T ss_pred CCCchhheEE-EEc---cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5888887766 443 24567888999 7889999995421 34788999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+|||++.++.+|++|||++.......
T Consensus 137 ~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 173 (297)
T cd05089 137 EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYV------------------------------------------- 173 (297)
T ss_pred HCCcccCcCCcceEEECCCCeEEECCcCCCcccccee-------------------------------------------
Confidence 9999999999999999999999999999874211000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
.......+..|+|||.+.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG 205 (297)
T cd05089 174 ------------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFG 205 (297)
T ss_pred ------------------------------------------------ccCCCCcCccccCchhhccCCCCchhhHHHHH
Confidence 00000124469999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||....... ....+.....++.....++.+.+|+.+||..+|.+||+++++++
T Consensus 206 ~il~el~t~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 206 VLLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred HHHHHHHcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999995 665444333 33333333333334456678889999999999999999999875
No 366
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93 E-value=7.8e-26 Score=246.45 Aligned_cols=194 Identities=15% Similarity=0.179 Sum_probs=149.0
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcce
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NI 113 (886)
+|++++..++ .|. ..+..+++||| .+++|.+++.... ..+++.+++.|+.||+.||.|||++||+|+||||+||
T Consensus 97 ~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Ni 172 (302)
T cd05055 97 NHENIVNLLG-ACT---IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNV 172 (302)
T ss_pred CCCCcceEEE-EEe---cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceE
Confidence 6888888776 343 34568999999 7899999995432 3489999999999999999999999999999999999
Q ss_pred eeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 114 ll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|++.++.++++|||+++........
T Consensus 173 l~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------------- 197 (302)
T cd05055 173 LLTHGKIVKICDFGLARDIMNDSNY------------------------------------------------------- 197 (302)
T ss_pred EEcCCCeEEECCCcccccccCCCce-------------------------------------------------------
Confidence 9999999999999998544211000
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc----CC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PF 269 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf 269 (886)
.......++..|+|||.+.+..++.++|||||||++|||++ ||
T Consensus 198 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~ 244 (302)
T cd05055 198 ---------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244 (302)
T ss_pred ---------------------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCc
Confidence 00000134678999999998889999999999999999985 66
Q ss_pred CCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
............+.....+.......+.+.+|+.+||.++|++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 245 PGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 5544443333333333333333345678889999999999999999999986
No 367
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.93 E-value=9.4e-26 Score=246.85 Aligned_cols=215 Identities=15% Similarity=0.174 Sum_probs=152.2
Q ss_pred eecccccccCCCCCCccccccc-----cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 31 ELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
.+...+|++++..+. ++.+.. ....++++|||.+.+|..++......+++.+++.++.||++||.|||++||+|
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H 138 (311)
T cd07866 60 ILKKLKHPNVVPLID-MAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILH 138 (311)
T ss_pred HHHhcCCCCccchhh-heecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 445567888887766 332221 23467999999888899888665567999999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
+||||+||+++.++.++++|||++............
T Consensus 139 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-------------------------------------------- 174 (311)
T cd07866 139 RDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG-------------------------------------------- 174 (311)
T ss_pred CCCCHHHEEECCCCCEEECcCccchhccCCCccccc--------------------------------------------
Confidence 999999999999999999999998644222100000
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~e 264 (886)
.........+...++++|+|||.+.+. .++.++|||||||++||
T Consensus 175 -----------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e 219 (311)
T cd07866 175 -----------------------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAE 219 (311)
T ss_pred -----------------------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHH
Confidence 000000012234789999999988764 48999999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhc--cC----------------------CCCh----hhhccChhhHHHHHHccCCCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLR--HR----------------------VLPP----QLLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~--~~----------------------~~~~----~~~~~~~~~~~li~~~L~~dP~~R 313 (886)
|++ ||.............. .. ..++ .+....+.+.+|+.+||..||.+|
T Consensus 220 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 299 (311)
T cd07866 220 MFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKR 299 (311)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccC
Confidence 999 4433322211111000 00 0011 111233567799999999999999
Q ss_pred CCHHHHhcCCCC
Q 002736 314 PKMGELLQSEFL 325 (886)
Q Consensus 314 ps~~eil~h~~~ 325 (886)
||+.|++.||||
T Consensus 300 ~t~~ell~~~~f 311 (311)
T cd07866 300 LTASDALEHPYF 311 (311)
T ss_pred cCHHHHhcCCCC
Confidence 999999999997
No 368
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=1.4e-24 Score=248.85 Aligned_cols=286 Identities=18% Similarity=0.223 Sum_probs=221.1
Q ss_pred ccccc--cccceEEeeecCce----EE-EEec--cCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcc------
Q 002736 536 WINPF--LEGLCKYLSFSKLR----VK-ADLN--QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI------ 600 (886)
Q Consensus 536 ~~~~~--~d~~~~~w~~~~~~----~~-~~l~--~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~------ 600 (886)
+++|. .|+.+.+|+....- .. ..++ -.....|.+.|+|+.|+|||++||+|+.|+.|.||+....
T Consensus 28 ~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~f 107 (942)
T KOG0973|consen 28 FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVF 107 (942)
T ss_pred EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccc
Confidence 34555 78888899754321 01 0111 1334579999999999999999999999999999998831
Q ss_pred -----cCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCE
Q 002736 601 -----INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (886)
Q Consensus 601 -----~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~ 675 (886)
....+.........+|.+.|..++|+| ++.+|+|++.|++|.|||..+.+.+..+++|...|-.+.|.| -|.+
T Consensus 108 gs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP-~Gky 185 (942)
T KOG0973|consen 108 GSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDP-IGKY 185 (942)
T ss_pred cccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecccccccceEECC-ccCe
Confidence 111122233445567999999999999 899999999999999999999999999999999999999999 8999
Q ss_pred EEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeC----CCeEEEEecCCCCcceEEEec
Q 002736 676 LASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA----DHRIYYYDLRNSKIPLCTLIG 751 (886)
Q Consensus 676 l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~----Dg~I~vwDlr~~~~~~~~~~~ 751 (886)
||+-++|++|++|++.+-........+........-...+.|+|| |++|++..+ -.++.|.+-.+.+. -..+.|
T Consensus 186 ~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPD-G~~las~nA~n~~~~~~~IieR~tWk~-~~~LvG 263 (942)
T KOG0973|consen 186 FASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPD-GHHLASPNAVNGGKSTIAIIERGTWKV-DKDLVG 263 (942)
T ss_pred eeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCC-cCeecchhhccCCcceeEEEecCCcee-eeeeec
Confidence 999999999999998763222111222222223445889999999 899998643 45688888766663 667889
Q ss_pred CCCCeEEEEec------CCC------------EEEEEECCCcEEEEeCCCCCccccCCCceEee-cCCCceeEEEEecCC
Q 002736 752 HNKTVSYVKFV------DAT------------TLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-GHTNVKNFVGLSVWD 812 (886)
Q Consensus 752 h~~~V~~v~f~------~~~------------~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp~g 812 (886)
|.+++.+++|+ +.. .+|+||.|++|-||..... +|+.... -....|..++|+|||
T Consensus 264 H~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~------RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 264 HSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP------RPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred CCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC------CchhhhhhhhcCceeeeeEcCCC
Confidence 99999999994 222 6789999999999999765 4444322 224579999999999
Q ss_pred CEEEEEcCCCcEEEEecCC
Q 002736 813 GYVATGSETNEVFVYHKAF 831 (886)
Q Consensus 813 ~~lasgs~Dg~v~iwd~~~ 831 (886)
-.|..+|.||+|.+.++..
T Consensus 338 ~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 338 FSLFACSLDGTVALIHFEE 356 (942)
T ss_pred CeEEEEecCCeEEEEEcch
Confidence 9999999999999999874
No 369
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.93 E-value=8.9e-26 Score=242.04 Aligned_cols=201 Identities=14% Similarity=0.102 Sum_probs=149.8
Q ss_pred eecccccccCCCCCCccccccc---cCCceEEEEee-CCcchhhhhcC-----CCCCcChHHHHHHHHHHHHHHHhhccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (886)
.+...+|++++..++ .|.... .....+++||| .+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 53 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 131 (272)
T cd05075 53 CMKEFDHPNVMRLIG-VCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK 131 (272)
T ss_pred HHHhCCCCCcceEEE-EEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445568888888766 543222 22356777888 78899998732 224578999999999999999999999
Q ss_pred CeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcc
Q 002736 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (886)
Q Consensus 102 giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 181 (886)
||+||||||+|||++.++.+|++|||+++.........
T Consensus 132 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------------------ 169 (272)
T cd05075 132 SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYR------------------------------------------ 169 (272)
T ss_pred CeeccccchhheEEcCCCCEEECCCCcccccCccccee------------------------------------------
Confidence 99999999999999999999999999985432110000
Q ss_pred ccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHH
Q 002736 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (886)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvi 261 (886)
......+++.|+|||.+.+..++.++|||||||+
T Consensus 170 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i 203 (272)
T cd05075 170 ----------------------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT 203 (272)
T ss_pred ----------------------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence 0000134667999999998889999999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|||++ ||.. .........+.....++........+.+++.+||..+|.+|||+.++++
T Consensus 204 l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 204 MWEIATRGQTPYPG-VENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHcCCCCCCCC-CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 999987 5543 3333444444444333334455677889999999999999999999976
No 370
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.93 E-value=5.1e-26 Score=245.68 Aligned_cols=204 Identities=18% Similarity=0.140 Sum_probs=150.5
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+....|++++..++ ++.+. ....++++||| .|++|.+++.+....+++.++..++.||+.||.|||++||+|||
T Consensus 57 ~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~d 134 (284)
T cd05079 57 IEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRD 134 (284)
T ss_pred HHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 33455678888888666 55442 23557889999 79999999966555689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||++..........
T Consensus 135 lkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------------------------ 166 (284)
T cd05079 135 LAARNVLVESEHQVKIGDFGLTKAIETDKEYY------------------------------------------------ 166 (284)
T ss_pred cchheEEEcCCCCEEECCCccccccccCccce------------------------------------------------
Confidence 99999999999999999999986442110000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 ---------------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt 207 (284)
T cd05079 167 ---------------------------------------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207 (284)
T ss_pred ---------------------------------------eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhc
Confidence 00001245667999999988889999999999999999998
Q ss_pred ---CCCCCc--------------hhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGE--------------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|+.... ........+......+.+...++.+.+|+.+||+.+|.+||++.++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 208 YCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred CCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 221110 001111112222223334456678889999999999999999999986
No 371
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93 E-value=7.8e-26 Score=244.40 Aligned_cols=202 Identities=20% Similarity=0.221 Sum_probs=149.8
Q ss_pred ecccccccCCCCCCcccccccc--CCceEEEEeeCCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 32 LTHGDHLRNQGGLSGVCENEAA--IDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
+...+|++++..++ ++.+... ...++++|||.+++|.+++.... ..+++..++.++.||+.||.|||++||+|+||
T Consensus 55 l~~~~h~~i~~~~~-~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l 133 (287)
T cd07838 55 LESFEHPNIVRLLD-VCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL 133 (287)
T ss_pred hhccCCCCcceEEE-EEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence 34457888888777 4433221 12388999997789999986532 36899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
+|+||+++.++.+|++|||++........
T Consensus 134 ~~~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 162 (287)
T cd07838 134 KPQNILVTSDGQVKIADFGLARIYSFEMA--------------------------------------------------- 162 (287)
T ss_pred ChhhEEEccCCCEEEeccCcceeccCCcc---------------------------------------------------
Confidence 99999999999999999998854321100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~ 202 (287)
T cd07838 163 ----------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR 202 (287)
T ss_pred ----------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC
Confidence 001146788999999998889999999999999999998
Q ss_pred --CCCCCchhhHHhHhhccC-----------------CCC--------hhhhccChhhHHHHHHccCCCCCCCCCHHHHh
Q 002736 268 --PFSTGEEKTRTMSSLRHR-----------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~-----------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 320 (886)
||................ .++ .......+.+.++|.+||..||.+||++.+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 203 RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 554333222211111100 000 00112345667999999999999999999999
Q ss_pred cCCCC
Q 002736 321 QSEFL 325 (886)
Q Consensus 321 ~h~~~ 325 (886)
+||||
T Consensus 283 ~~~~~ 287 (287)
T cd07838 283 QHPYF 287 (287)
T ss_pred cCcCC
Confidence 99997
No 372
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=9.9e-26 Score=246.00 Aligned_cols=193 Identities=17% Similarity=0.185 Sum_probs=147.6
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|++++..++ ++.. .+.++++||| .+++|.++|.+. ...++...++.++.||+.||.|||
T Consensus 79 ~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 154 (304)
T cd05101 79 KHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA 154 (304)
T ss_pred cCCCchheeE-EEec---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 6888887776 4433 4678899999 788999999542 124778899999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+||+++.++.+|++|||+++.........
T Consensus 155 ~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~---------------------------------------- 194 (304)
T cd05101 155 SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK---------------------------------------- 194 (304)
T ss_pred HCCeeecccccceEEEcCCCcEEECCCccceecccccccc----------------------------------------
Confidence 9999999999999999999999999999986442211000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||++.+..++.++||||||
T Consensus 195 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 226 (304)
T cd05101 195 ------------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 226 (304)
T ss_pred ------------------------------------------------cccCCCCCceeeCchhhccCCCCchhhHHHHH
Confidence 00001345679999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||.. .........+............+..+.+|+.+||..+|.+||++.|+++
T Consensus 227 ~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 227 VLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHHHcCCCCCccc-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 99999987 4533 3333344444443333334456678889999999999999999999987
No 373
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.93 E-value=8.2e-26 Score=243.87 Aligned_cols=201 Identities=17% Similarity=0.234 Sum_probs=151.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+.+.+|++.+..++ ++. ..+..+++|||.+++|.+++.... ..+++..++.++.||+.||.|||++|++|+||+
T Consensus 51 ~l~~l~~~~iv~~~~-~~~---~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~ 126 (283)
T cd07835 51 LLKELNHPNIVRLLD-VVH---SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK 126 (283)
T ss_pred HHHhcCCCCccCHhh-eec---cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence 455567888888776 443 347889999998789999996543 468999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++...+....
T Consensus 127 p~nil~~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 154 (283)
T cd07835 127 PQNLLIDREGALKLADFGLARAFGVPVR---------------------------------------------------- 154 (283)
T ss_pred HHHEEEcCCCcEEEeecccccccCCCcc----------------------------------------------------
Confidence 9999999999999999999854321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+. .++.++|||||||++|||++
T Consensus 155 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 196 (283)
T cd07835 155 --------------------------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNR 196 (283)
T ss_pred --------------------------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhC
Confidence 00011457889999988764 47899999999999999999
Q ss_pred --CCCCCchhhHHhHhhccC---------------------------CCChhhhccChhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 --PFSTGEEKTRTMSSLRHR---------------------------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e 318 (886)
||................ ..........+.+.+++.+||+.+|.+||++.|
T Consensus 197 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 276 (283)
T cd07835 197 RPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKA 276 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 665443322222111100 000111233466789999999999999999999
Q ss_pred HhcCCCC
Q 002736 319 LLQSEFL 325 (886)
Q Consensus 319 il~h~~~ 325 (886)
+++||||
T Consensus 277 il~~~~~ 283 (283)
T cd07835 277 ALQHPYF 283 (283)
T ss_pred HhcCCCC
Confidence 9999997
No 374
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.93 E-value=2.2e-25 Score=215.13 Aligned_cols=267 Identities=16% Similarity=0.236 Sum_probs=222.8
Q ss_pred cccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecC
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (886)
Q Consensus 537 ~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~ 616 (886)
|++..|+.=-+-+-.++.-+ |.+.+|++.|.+..++.+...-|+++.|-+-||||.-+. -.+..+.|
T Consensus 33 isa~kd~~pmlr~g~tgdwi-----gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tg--------delhsf~h 99 (334)
T KOG0278|consen 33 ISASKDGKPMLRNGDTGDWI-----GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTG--------DELHSFEH 99 (334)
T ss_pred EEeccCCCchhccCCCCCcE-----EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhh--------hhhhhhhh
Confidence 55555665555555565544 345789999999999999999999999999999997653 12334568
Q ss_pred CCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCce-EEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhh
Q 002736 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (886)
Q Consensus 617 ~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~ 695 (886)
...|..++|+. +.+.|++|+.+..++|+|++..+ +..++.+|.+.|..+-|.. ..+.+++.++|++|++||.++
T Consensus 100 khivk~~af~~-ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rT--- 174 (334)
T KOG0278|consen 100 KHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRT--- 174 (334)
T ss_pred hheeeeEEecc-cchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec-cCceEEeeccCCceEEEEecc---
Confidence 88999999997 78899999999999999998765 5788999999999999996 778888889999999999999
Q ss_pred hhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCC
Q 002736 696 LLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDN 774 (886)
Q Consensus 696 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg 774 (886)
+..++++..+.+|+++.++++ |++|.++ ..+.|.+||..+... +..+... ..|.+...+ +...++.|+.|.
T Consensus 175 ----gt~v~sL~~~s~VtSlEvs~d-G~ilTia-~gssV~Fwdaksf~~-lKs~k~P-~nV~SASL~P~k~~fVaGged~ 246 (334)
T KOG0278|consen 175 ----GTEVQSLEFNSPVTSLEVSQD-GRILTIA-YGSSVKFWDAKSFGL-LKSYKMP-CNVESASLHPKKEFFVAGGEDF 246 (334)
T ss_pred ----CcEEEEEecCCCCcceeeccC-CCEEEEe-cCceeEEeccccccc-eeeccCc-cccccccccCCCceEEecCcce
Confidence 899999999999999999999 7766554 467899999998774 5555432 346666665 778999999999
Q ss_pred cEEEEeCCCCCccccCCCceEe-ecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcc
Q 002736 775 TLKLWDLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 835 (886)
Q Consensus 775 ~i~lwd~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~ 835 (886)
.++.||..++.. +..+ +||-++|.||.|+|+|...|+||+||+|++|.+..++.-
T Consensus 247 ~~~kfDy~TgeE------i~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 247 KVYKFDYNTGEE------IGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred EEEEEeccCCce------eeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 999999999853 5555 899999999999999999999999999999998876544
No 375
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.93 E-value=7.7e-26 Score=244.82 Aligned_cols=205 Identities=14% Similarity=0.109 Sum_probs=153.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC---------CCcChHHHHHHHHHHHHHHHhhcc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
.+...+|++++..++ ++. ..+..|++||| .+++|.+++.+.. ..++...+..++.||+.||.|||+
T Consensus 62 ~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 137 (288)
T cd05061 62 VMKGFTCHHVVRLLG-VVS---KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA 137 (288)
T ss_pred HHHhCCCCCeeeEEE-EEc---CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 445567888888776 433 23568999999 7899999995321 234567889999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
+||+||||||+||+++.++.++++|||+++.........
T Consensus 138 ~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~----------------------------------------- 176 (288)
T cd05061 138 KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----------------------------------------- 176 (288)
T ss_pred CCCcCCCCChheEEEcCCCcEEECcCCcccccccccccc-----------------------------------------
Confidence 999999999999999999999999999985432110000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
......++..|+|||.+.+..++.++|||||||
T Consensus 177 -----------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~ 209 (288)
T cd05061 177 -----------------------------------------------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 209 (288)
T ss_pred -----------------------------------------------ccCCCcccccccCHHHhccCCCChHhHHHHHHH
Confidence 000013466799999998888999999999999
Q ss_pred HHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc------CCCCCCC
Q 002736 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFLNEP 328 (886)
Q Consensus 261 il~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~------h~~~~~~ 328 (886)
++|||++ ||..... ......+.....++.....++.+.+++.+||+.+|.+||++.++++ ||||.+.
T Consensus 210 ~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 210 VLWEITSLAEQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 9999997 6644332 3333333333333333445678899999999999999999999986 8888764
No 376
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.93 E-value=7e-26 Score=255.02 Aligned_cols=156 Identities=15% Similarity=0.163 Sum_probs=121.3
Q ss_pred CcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCc
Q 002736 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (886)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (886)
.+++.++..++.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~------------------- 293 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY------------------- 293 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-------------------
Confidence 4678888999999999999999999999999999999999999999999998543211000
Q ss_pred hhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccc
Q 002736 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (886)
Q Consensus 158 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (886)
.......+++.
T Consensus 294 ---------------------------------------------------------------------~~~~~~~~~~~ 304 (400)
T cd05105 294 ---------------------------------------------------------------------VSKGSTFLPVK 304 (400)
T ss_pred ---------------------------------------------------------------------cccCCcCCCcc
Confidence 00001145778
Q ss_pred eecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCC
Q 002736 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 238 Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (886)
|+|||.+.+..++.++|||||||++|||++ ||............+.....++.....++.+.+++.+||..+|.+|
T Consensus 305 y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 384 (400)
T cd05105 305 WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKR 384 (400)
T ss_pred eEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHC
Confidence 999999998889999999999999999985 6654433333444444443344444566778899999999999999
Q ss_pred CCHHHHhc
Q 002736 314 PKMGELLQ 321 (886)
Q Consensus 314 ps~~eil~ 321 (886)
|++.++.+
T Consensus 385 Pt~~~l~~ 392 (400)
T cd05105 385 PSFLHLSD 392 (400)
T ss_pred cCHHHHHH
Confidence 99998865
No 377
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93 E-value=7.6e-26 Score=243.97 Aligned_cols=201 Identities=20% Similarity=0.288 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++++..++ ++.+ .+.++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 51 ~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p 126 (283)
T cd05118 51 LLKELNHPNIIKLLD-VFRH---KGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKP 126 (283)
T ss_pred HHHHhcCCCcchHHH-hhcc---CCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCH
Confidence 444556888887666 4443 377899999977899999976556889999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||.+........
T Consensus 127 ~nili~~~~~~~l~df~~~~~~~~~~~----------------------------------------------------- 153 (283)
T cd05118 127 ENLLINTEGVLKLADFGLARSFGSPVR----------------------------------------------------- 153 (283)
T ss_pred HHEEECCCCcEEEeeeeeeEecCCCcc-----------------------------------------------------
Confidence 999999999999999998854322100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++.+|+|||.+.+. .++.++|||||||++|+|++
T Consensus 154 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 154 -------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred -------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 00112568889999999876 68999999999999999999
Q ss_pred -CCCCCchhhHHhHhhcc--C--------------------------CCChhhhccChhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 -PFSTGEEKTRTMSSLRH--R--------------------------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~--~--------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e 318 (886)
||............... . .........+.++.+||.+||.+||.+||++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 276 (283)
T cd05118 197 PLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276 (283)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence 55433322111111100 0 000112234567889999999999999999999
Q ss_pred HhcCCCC
Q 002736 319 LLQSEFL 325 (886)
Q Consensus 319 il~h~~~ 325 (886)
++.||||
T Consensus 277 ll~~~~~ 283 (283)
T cd05118 277 ALAHPYF 283 (283)
T ss_pred HhhCCCC
Confidence 9999997
No 378
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.93 E-value=5.5e-24 Score=207.68 Aligned_cols=239 Identities=18% Similarity=0.267 Sum_probs=213.1
Q ss_pred ceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEe
Q 002736 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (886)
Q Consensus 610 ~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd 689 (886)
|+..++|..+++.|.+|. ++.+|+|++.|.++.||-.-.|+.+.++.+|.+.|||++.+- +...+++|+.|.+++|||
T Consensus 3 pi~l~GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 3 PILLQGHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccccCccccceEEecC-CCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC-CcceeeeccccceeEEEE
Confidence 566778999999999998 799999999999999999889999999999999999999995 889999999999999999
Q ss_pred CchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeC-----CCeEEEEecCCC------CcceEEEecCCCCeEE
Q 002736 690 INQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA-----DHRIYYYDLRNS------KIPLCTLIGHNKTVSY 758 (886)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~-----Dg~I~vwDlr~~------~~~~~~~~~h~~~V~~ 758 (886)
+.+ ++.+..++.+..|..+.|+++ +++++.... .+.|.++|++.. +.|...+..+.+.++.
T Consensus 81 v~t-------Gk~la~~k~~~~Vk~~~F~~~-gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~ 152 (327)
T KOG0643|consen 81 VET-------GKQLATWKTNSPVKRVDFSFG-GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITS 152 (327)
T ss_pred cCC-------CcEEEEeecCCeeEEEeeccC-CcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceee
Confidence 999 999999999999999999999 777776643 467999999943 3468888889999999
Q ss_pred EEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCccee
Q 002736 759 VKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALS 837 (886)
Q Consensus 759 v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~ 837 (886)
+-|. -++.|++|..||.|..||.+++. ..+.+-..|...|+.+.++++..+++|||.|.+.++||..+-+.+.+
T Consensus 153 a~Wg~l~~~ii~Ghe~G~is~~da~~g~-----~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kt 227 (327)
T KOG0643|consen 153 ALWGPLGETIIAGHEDGSISIYDARTGK-----ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKT 227 (327)
T ss_pred eeecccCCEEEEecCCCcEEEEEcccCc-----eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEE
Confidence 9996 88999999999999999999974 44667778999999999999999999999999999999999988887
Q ss_pred eccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCC
Q 002736 838 FNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSG 878 (886)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg 878 (886)
+... .+|++.+++|... .++.|+...
T Consensus 228 y~te--------------~PvN~aaisP~~d-~VilgGGqe 253 (327)
T KOG0643|consen 228 YTTE--------------RPVNTAAISPLLD-HVILGGGQE 253 (327)
T ss_pred eeec--------------ccccceecccccc-eEEecCCce
Confidence 7632 3599999999988 777777654
No 379
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93 E-value=5.6e-26 Score=252.14 Aligned_cols=205 Identities=16% Similarity=0.251 Sum_probs=152.8
Q ss_pred ceeecccccccCCCCCCcccccc---ccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
...+....|++++.+++ ++... .....++++|||.+.+|..++. ..+++.++..++.||+.||.|||++||+|
T Consensus 65 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 140 (342)
T cd07879 65 LTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIH 140 (342)
T ss_pred HHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 34455567888887666 44322 1234579999998788888763 35899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+||+++.++.+|++|||+++.....
T Consensus 141 ~dlkp~NIll~~~~~~kL~dfg~~~~~~~~-------------------------------------------------- 170 (342)
T cd07879 141 RDLKPGNLAVNEDCELKILDFGLARHADAE-------------------------------------------------- 170 (342)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcCCCCC--------------------------------------------------
Confidence 999999999999999999999998532110
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~e 264 (886)
.....++++|+|||.+.+ ..++.++|||||||++||
T Consensus 171 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~e 207 (342)
T cd07879 171 -------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAE 207 (342)
T ss_pred -------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHH
Confidence 001256889999999876 458999999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhcc------------------------CCCC-----hhhhccChhhHHHHHHccCCCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRH------------------------RVLP-----PQLLLKFPKEASFCLWLLHPEPSG 312 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~------------------------~~~~-----~~~~~~~~~~~~li~~~L~~dP~~ 312 (886)
|++ ||............+.. ...+ ..+....+.+.+|+.+||+.||.+
T Consensus 208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 287 (342)
T cd07879 208 MLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDK 287 (342)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhh
Confidence 999 77544322211111100 0000 011234566789999999999999
Q ss_pred CCCHHHHhcCCCCCCCcC
Q 002736 313 RPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 313 Rps~~eil~h~~~~~~~~ 330 (886)
||++.+++.||||.....
T Consensus 288 R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 288 RLTATEALEHPYFDSFRD 305 (342)
T ss_pred CcCHHHHhcCcchhhccc
Confidence 999999999999987654
No 380
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=2.2e-23 Score=198.10 Aligned_cols=258 Identities=19% Similarity=0.234 Sum_probs=204.6
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeC--CC-CCeEEEec-CCC
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS--YI-KSQIASSN-FEG 640 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~--~~-~~~las~s-~Dg 640 (886)
.+|.+.|+|.+|+|+|+++|||+.|+.||+.-++....... .......-|.+.|..++|-. .. +.+|++++ .|.
T Consensus 86 khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~--g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc 163 (350)
T KOG0641|consen 86 KHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNAT--GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDC 163 (350)
T ss_pred cccCccEEEEEecCccCeEEecCCCceEEEEeccccccccc--CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcc
Confidence 57999999999999999999999999999987764322211 11122334889999999953 22 34666665 366
Q ss_pred cEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeC
Q 002736 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPL 719 (886)
Q Consensus 641 ~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp 719 (886)
.|.+-|..+++....+.+|.+-|.++--. ++.++++|+.|.+|+.||++-+..+..++.....-. ....|..|+..|
T Consensus 164 ~iy~tdc~~g~~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp 241 (350)
T KOG0641|consen 164 KIYITDCGRGQGFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP 241 (350)
T ss_pred eEEEeecCCCCcceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence 77777999999999999999999887433 689999999999999999998433322222111100 135699999999
Q ss_pred CCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeec
Q 002736 720 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG 798 (886)
Q Consensus 720 ~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~ 798 (886)
. |++|++|-.|....+||+|.++ ++..+..|...|.+|.|+ ...+++|+|.|..|++-|+...-.. .-++.....
T Consensus 242 s-grll~sg~~dssc~lydirg~r-~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~--el~~~vv~e 317 (350)
T KOG0641|consen 242 S-GRLLASGHADSSCMLYDIRGGR-MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH--ELPIMVVAE 317 (350)
T ss_pred C-cceeeeccCCCceEEEEeeCCc-eeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh--cCceEEEEe
Confidence 9 9999999999999999999888 699999999999999998 6679999999999999999753210 134566778
Q ss_pred CCCceeEEEEecCCCEEEEEcCCCcEEEEecC
Q 002736 799 HTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 830 (886)
Q Consensus 799 h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~ 830 (886)
|+..+..+.|+|..--+++.|.|.++.+|-+.
T Consensus 318 hkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 318 HKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 99999999999999999999999999999753
No 381
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93 E-value=5.1e-26 Score=241.91 Aligned_cols=189 Identities=17% Similarity=0.204 Sum_probs=143.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .|.. +..+++||| .+++|.+++.+....++...++.+++||+.||.|||++||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlk 128 (259)
T cd05037 54 LMSQLSHKHLVKLYG-VCVR----DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVC 128 (259)
T ss_pred HHHcCCCcchhheee-EEec----CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCc
Confidence 455667888888776 5543 456889999 8899999997654578999999999999999999999999999999
Q ss_pred CcceeeccCC-------ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 110 PSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 110 P~NIll~~~~-------~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|+|||++..+ .+|++|||++......
T Consensus 129 p~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------------------------------------------- 161 (259)
T cd05037 129 GKNILVARYGLNEGYVPFIKLSDPGIPITVLSR----------------------------------------------- 161 (259)
T ss_pred cceEEEecCccccCCceeEEeCCCCcccccccc-----------------------------------------------
Confidence 9999999877 7999999988533110
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC--CCCcccccchHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGV 260 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDIwSlGv 260 (886)
....++..|+|||.+.+. .++.++|||||||
T Consensus 162 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 194 (259)
T cd05037 162 -----------------------------------------------EERVERIPWIAPECIRNGQASLTIAADKWSFGT 194 (259)
T ss_pred -----------------------------------------------cccccCCCccChhhhcCCCCCcchhhHHHHHHH
Confidence 001456679999999876 6899999999999
Q ss_pred HHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 261 il~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++|||++ ||..... .............+ ......+.+++.+||..+|.+||++.++++
T Consensus 195 ~~~~l~~~~~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 195 TLLEICSNGEEPLSTLSS-SEKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHhCCCCCcccCCc-hhHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9999987 4433321 11111111111111 112267889999999999999999999986
No 382
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.93 E-value=5.9e-26 Score=245.06 Aligned_cols=202 Identities=16% Similarity=0.247 Sum_probs=150.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCC--CCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++..++ .+. ..+.++++|||..++|.+++.... ..+++..++.++.||+.||.|||++||+|||
T Consensus 50 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~d 125 (284)
T cd07836 50 SLMKELKHENIVRLHD-VIH---TENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRD 125 (284)
T ss_pred HHHHhhcCCCEeeeee-eEe---eCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 3444557888888776 333 246789999997789999985433 4689999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||++........
T Consensus 126 l~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-------------------------------------------------- 155 (284)
T cd07836 126 LKPQNLLINKRGELKLADFGLARAFGIPVN-------------------------------------------------- 155 (284)
T ss_pred CCHHHEEECCCCcEEEeecchhhhhcCCcc--------------------------------------------------
Confidence 999999999999999999999853321100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHh
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl 266 (886)
......++.+|+|||.+.+. .++.++|||||||++|||+
T Consensus 156 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~ 195 (284)
T cd07836 156 ----------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMI 195 (284)
T ss_pred ----------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 00012568889999998764 4789999999999999999
Q ss_pred c---CCCCCchhhHHhHhhcc-------------------CCCC--------hhhhccChhhHHHHHHccCCCCCCCCCH
Q 002736 267 C---PFSTGEEKTRTMSSLRH-------------------RVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~-------------------~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
+ ||............+.. ...+ ......++.+.+++.+||+.||.+||++
T Consensus 196 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 275 (284)
T cd07836 196 TGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISA 275 (284)
T ss_pred hCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCH
Confidence 9 66544322221111100 0000 0112335677899999999999999999
Q ss_pred HHHhcCCCC
Q 002736 317 GELLQSEFL 325 (886)
Q Consensus 317 ~eil~h~~~ 325 (886)
.++++||||
T Consensus 276 ~~~l~~~~f 284 (284)
T cd07836 276 HDALQHPWF 284 (284)
T ss_pred HHHhcCCCC
Confidence 999999997
No 383
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=8.1e-26 Score=241.32 Aligned_cols=206 Identities=16% Similarity=0.128 Sum_probs=156.2
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+.+.+|++++..++ .+.+ .....++++||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+|+|
T Consensus 55 i~~l~~l~h~~i~~~~~-~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~H~d 131 (264)
T cd06653 55 IQLLKNLRHDRIVQYYG-CLRD-PEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMIVHRD 131 (264)
T ss_pred HHHHHHcCCCCcceEEE-EEEc-CCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 33555667888887776 3322 234567889999 788999998654 4578999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||+++........ .
T Consensus 132 l~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~----------------- 163 (264)
T cd06653 132 IKGANILRDSAGNVKLGDFGASKRIQTICMS-------------------------------G----------------- 163 (264)
T ss_pred CCHHHEEEcCCCCEEECcccccccccccccc-------------------------------C-----------------
Confidence 9999999999999999999998643211000 0
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ---------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 204 (264)
T cd06653 164 ---------------------------------------TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT 204 (264)
T ss_pred ---------------------------------------ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHh
Confidence 00011357888999999988889999999999999999998
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||..................+..+....+.+.+++.+||. +|..||++.+++.|||.
T Consensus 205 g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 205 EKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 7755444444443333333333344456778899999999 57999999999999984
No 384
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.93 E-value=7.4e-26 Score=251.27 Aligned_cols=206 Identities=17% Similarity=0.220 Sum_probs=152.3
Q ss_pred eecccccccCCCCCCcccccc--ccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+....|++++.....+..++ .....+++++||.|++|.+++.. ..+++.+++.++.||+.||.|||++||+||||
T Consensus 67 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dl 144 (343)
T cd07851 67 LLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDL 144 (343)
T ss_pred HHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 344456777766554121111 12345899999999999999965 46899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++......
T Consensus 145 kp~Nill~~~~~~kL~dfg~~~~~~~~----------------------------------------------------- 171 (343)
T cd07851 145 KPSNIAVNEDCELKILDFGLARHTDDE----------------------------------------------------- 171 (343)
T ss_pred CHHHeEECCCCCEEEcccccccccccc-----------------------------------------------------
Confidence 999999999999999999998533111
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~ 267 (886)
.....++.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 172 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ellt 211 (343)
T cd07851 172 ----------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 211 (343)
T ss_pred ----------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHh
Confidence 001256888999999866 358899999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccC-C----------------------------CChhhhccChhhHHHHHHccCCCCCCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHR-V----------------------------LPPQLLLKFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps 315 (886)
||............+... . +.......++.+.+|+.+||..+|.+|||
T Consensus 212 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt 291 (343)
T cd07851 212 GKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT 291 (343)
T ss_pred CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC
Confidence 665443322211111100 0 00111234567889999999999999999
Q ss_pred HHHHhcCCCCCCCcCc
Q 002736 316 MGELLQSEFLNEPRDS 331 (886)
Q Consensus 316 ~~eil~h~~~~~~~~~ 331 (886)
+.++++||||.....+
T Consensus 292 ~~ell~h~~~~~~~~~ 307 (343)
T cd07851 292 AAEALAHPYLAEYHDP 307 (343)
T ss_pred HHHHhcCCCccccCCC
Confidence 9999999999876444
No 385
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.6e-24 Score=242.67 Aligned_cols=245 Identities=16% Similarity=0.204 Sum_probs=200.1
Q ss_pred cCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCC---------------------------------------------
Q 002736 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR--------------------------------------------- 649 (886)
Q Consensus 615 ~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t--------------------------------------------- 649 (886)
+|.+.|+++.|++ +|.+||+|+.||.|+||.+..
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 6999999999999 899999999999999998754
Q ss_pred ---------------ceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEE
Q 002736 650 ---------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCC 714 (886)
Q Consensus 650 ---------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~ 714 (886)
.+++++|.+|.+.|.++.|+ ..++|+++|.|.+|+||++.. ..++..+.|...|+|
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS--Kn~fLLSSSMDKTVRLWh~~~-------~~CL~~F~HndfVTc 414 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWS--KNNFLLSSSMDKTVRLWHPGR-------KECLKVFSHNDFVTC 414 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheecccc--cCCeeEeccccccEEeecCCC-------cceeeEEecCCeeEE
Confidence 01234468999999999999 578999999999999999998 899999999999999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCc
Q 002736 715 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPL 793 (886)
Q Consensus 715 v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~ 793 (886)
|+|+|-+.++|++||-||.|+||++...+ +..+..-..-|++++|. +|+..+.|+.+|.+++|++...+...... +
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~--Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~-I 491 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKK--VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFH-I 491 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCe--eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeee-E
Confidence 99999989999999999999999998776 44444444789999996 99999999999999999998764211000 0
Q ss_pred eE----eecCCCceeEEEEecCCC-EEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCC
Q 002736 794 HS----FTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS 868 (886)
Q Consensus 794 ~~----~~~h~~~v~~v~~sp~g~-~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~ 868 (886)
.. -..|. .|+++.|.|... .|++.|.|..|+|||....+.+..|+-.+. ...-....|+.||.
T Consensus 492 ~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n-----------~~SQ~~Asfs~Dgk 559 (712)
T KOG0283|consen 492 RLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN-----------TSSQISASFSSDGK 559 (712)
T ss_pred eeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc-----------CCcceeeeEccCCC
Confidence 00 01123 799999998654 688889999999999988777766652211 11134567889999
Q ss_pred cEEEEEeCCCCEEEEEe
Q 002736 869 NTLVAANSSGNIKILEM 885 (886)
Q Consensus 869 ~~l~s~~~dg~I~iw~l 885 (886)
+|++|+.|..|+||++
T Consensus 560 -~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 560 -HIVSASEDSWVYIWKN 575 (712)
T ss_pred -EEEEeecCceEEEEeC
Confidence 9999999999999986
No 386
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93 E-value=1.2e-25 Score=239.66 Aligned_cols=197 Identities=15% Similarity=0.132 Sum_probs=150.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..+. ++. ..+.++++||| .|++|.+++... ...+++..+..++.||+.||.|||++||+||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 129 (261)
T cd05068 54 IMKKLRHPKLIQLYA-VCT---LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDL 129 (261)
T ss_pred HHHHCCCCCccceeE-EEe---cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 444557888887666 443 34678899999 599999999654 356899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||+++........
T Consensus 130 ~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------- 159 (261)
T cd05068 130 AARNVLVGENNICKVADFGLARVIKEDIYE-------------------------------------------------- 159 (261)
T ss_pred CcceEEEcCCCCEEECCcceEEEccCCccc--------------------------------------------------
Confidence 999999999999999999998654311000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~ 200 (261)
T cd05068 160 ---------------------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTY 200 (261)
T ss_pred ---------------------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhc
Confidence 0000012346999999988889999999999999999997
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+......+.....+..+.+++.+||..+|.+||++.++++
T Consensus 201 g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 201 GRMPYPGMT-NAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred CCCCCCCCC-HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 664433 33333333333333334456678889999999999999999999875
No 387
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93 E-value=8.8e-26 Score=243.30 Aligned_cols=197 Identities=17% Similarity=0.143 Sum_probs=149.0
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC--------------CCcChHHHHHHHHHHHHHHH
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQIVEIVY 96 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~ 96 (886)
+....|++++.+++ ++. ..+.++++||| .+++|.+++.... ..+++..++.++.||+.||.
T Consensus 61 l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ 136 (280)
T cd05092 61 LTVLQHQHIVRFYG-VCT---EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMV 136 (280)
T ss_pred HhcCCCCCCceEEE-EEe---cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHH
Confidence 34457888888766 443 34668899998 7899999985432 24789999999999999999
Q ss_pred hhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccC
Q 002736 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (886)
Q Consensus 97 ~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 176 (886)
|||++||+||||||+|||++.++.+|++|||++..........
T Consensus 137 ~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~------------------------------------- 179 (280)
T cd05092 137 YLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR------------------------------------- 179 (280)
T ss_pred HHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceee-------------------------------------
Confidence 9999999999999999999999999999999985331110000
Q ss_pred CCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccc
Q 002736 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (886)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIw 256 (886)
......+++.|+|||.+.+..++.++|||
T Consensus 180 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05092 180 ---------------------------------------------------VGGRTMLPIRWMPPESILYRKFTTESDIW 208 (280)
T ss_pred ---------------------------------------------------cCCCccccccccCHHHhccCCcCchhhHH
Confidence 00001346779999999988899999999
Q ss_pred hHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 257 SlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||||++|||++ ||........ .........+......++.+.+|+.+||..||.+||++.++++
T Consensus 209 slG~il~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 209 SFGVVLWEIFTYGKQPWYQLSNTEA-IECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHHHHHHcCCCCCCccCCHHHH-HHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999986 5644433333 3333333333333456678899999999999999999999875
No 388
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.93 E-value=1e-25 Score=240.00 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=150.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ .+. ..+.++++||| .+++|.+++.+. ...++...++.++.||+.||.|||+.||+||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl 129 (261)
T cd05072 54 LMKTLQHDKLVRLYA-VVT---KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 129 (261)
T ss_pred HHHhCCCCCeeeEEE-EEc---CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence 344567888888776 332 34567899998 789999999543 356789999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++..+.++++|||++.........
T Consensus 130 ~p~nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------- 159 (261)
T cd05072 130 RAANVLVSESLMCKIADFGLARVIEDNEYT-------------------------------------------------- 159 (261)
T ss_pred chhhEEecCCCcEEECCCccceecCCCcee--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~ 200 (261)
T cd05072 160 ---------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTY 200 (261)
T ss_pred ---------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHcc
Confidence 0000134667999999988889999999999999999996
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||... ........+......+.....+..+.+++.+||..+|++||+++++++
T Consensus 201 g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 201 GKIPYPGM-SNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 55433 333344444444344444455677889999999999999999999865
No 389
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=1.6e-25 Score=237.97 Aligned_cols=202 Identities=16% Similarity=0.100 Sum_probs=152.5
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
+...+...+|++++..++ .+.+ ..++++||| .+++|.+++.+.. ..+++..+..++.||+.||.|||++||+|
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 120 (257)
T cd05040 46 EAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIH 120 (257)
T ss_pred HHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 344566678888888766 4433 678899999 7899999996644 57899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
+||||+||+++.++.+|++|||++.........-.
T Consensus 121 ~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~--------------------------------------------- 155 (257)
T cd05040 121 RDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV--------------------------------------------- 155 (257)
T ss_pred cccCcccEEEecCCEEEecccccccccccccccee---------------------------------------------
Confidence 99999999999999999999999865432100000
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 156 ------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el 193 (257)
T cd05040 156 ------------------------------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEM 193 (257)
T ss_pred ------------------------------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHH
Confidence 00011456779999999888899999999999999999
Q ss_pred hc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++ ||...................+.....++.+.+++.+||..+|++||++.++++
T Consensus 194 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 194 FTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 86 664443333222222222222233345577889999999999999999999876
No 390
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.93 E-value=9.3e-26 Score=246.00 Aligned_cols=190 Identities=15% Similarity=0.159 Sum_probs=144.4
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC---------------CCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
+|++++..++ ++. ..+.++++||| .+++|.++|.+.. ..+++..++.++.||+.||+|||
T Consensus 66 ~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 141 (303)
T cd05088 66 HHPNIINLLG-ACE---HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 141 (303)
T ss_pred CCCCcceEEE-EEC---CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH
Confidence 6888887766 443 34568889999 7899999995421 25789999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+|||++.++.+|++|||++.......
T Consensus 142 ~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 178 (303)
T cd05088 142 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------------------- 178 (303)
T ss_pred hCCccccccchheEEecCCCcEEeCccccCcccchhh-------------------------------------------
Confidence 9999999999999999999999999999884211000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 210 (303)
T cd05088 179 ------------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 210 (303)
T ss_pred ------------------------------------------------hcccCCCcccccCHHHHhccCCcccccchhhh
Confidence 00000234569999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||...... .....+.....++.+...++.+.+|+.+||..+|.+||++.++++
T Consensus 211 ~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 275 (303)
T cd05088 211 VLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 275 (303)
T ss_pred hHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999985 66433332 222333333233333445678889999999999999999999987
No 391
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=8.4e-26 Score=239.92 Aligned_cols=201 Identities=17% Similarity=0.224 Sum_probs=155.7
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|++++..++ .+. ..+.+++++|| .+++|.+++.+. ...+++..++.++.||+.||.|||++||+|+|
T Consensus 51 ~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~d 126 (257)
T cd08225 51 ILLAKMKHPNIVTFFA-SFQ---ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRD 126 (257)
T ss_pred HHHHhCCCCChhhhhh-eec---cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 3455667888888776 443 34678899999 789999999553 33579999999999999999999999999999
Q ss_pred cCCcceeeccCCc-eeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 108 VRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 108 lkP~NIll~~~~~-vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
|||+||+++.++. +|++|||.+........
T Consensus 127 l~~~nil~~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 157 (257)
T cd08225 127 IKSQNIFLSKNGMVAKLGDFGIARQLNDSME------------------------------------------------- 157 (257)
T ss_pred CCHHHEEEcCCCCeEEecccccchhccCCcc-------------------------------------------------
Confidence 9999999987754 69999998854321100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......|++.|+|||.+.+..++.++|+|||||++|||+
T Consensus 158 -----------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~ 196 (257)
T cd08225 158 -----------------------------------------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELC 196 (257)
T ss_pred -----------------------------------------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 000125788899999998888999999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
+ ||........... ......++........+.+++.+||..+|++|||+.++++||||
T Consensus 197 ~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 197 TLKHPFEGNNLHQLVLK-ICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred hCCCCCCCccHHHHHHH-HhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 8 7755444333333 33333333334455678899999999999999999999999997
No 392
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.93 E-value=1.1e-25 Score=241.63 Aligned_cols=191 Identities=18% Similarity=0.203 Sum_probs=142.4
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|+|++.+++ +|.+ .+..+++||| .+++|..++.+....+++..++.++.||+.||.|||++||+|||||
T Consensus 69 ~~~~l~h~niv~~~~-~~~~---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk 144 (274)
T cd05076 69 LMSQVSHIHLAFVHG-VCVR---GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVC 144 (274)
T ss_pred HHhcCCCCCeeeEEE-EEEe---CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCC
Confidence 345567899988777 5543 4567889999 8899999997655678999999999999999999999999999999
Q ss_pred CcceeeccCC-------ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 110 PSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 110 P~NIll~~~~-------~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|+|||++..+ .+|++|||++......
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----------------------------------------------- 177 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----------------------------------------------- 177 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc-----------------------------------------------
Confidence 9999997643 3788898876321000
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 261 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvi 261 (886)
....++..|+|||.+.+ ..++.++|||||||+
T Consensus 178 -----------------------------------------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~ 210 (274)
T cd05076 178 -----------------------------------------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTT 210 (274)
T ss_pred -----------------------------------------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHH
Confidence 00145677999999876 458999999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
+|||+. ||........ ..........+ ....+.+.+++.+||..+|.+||++.+++++
T Consensus 211 l~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 211 LLEICFDGEVPLKERTPSEK-ERFYEKKHRLP--EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHhCCCCCccccChHHH-HHHHHhccCCC--CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 999963 6644332221 11111111111 1234678899999999999999999999874
No 393
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93 E-value=1.6e-25 Score=240.07 Aligned_cols=201 Identities=14% Similarity=0.133 Sum_probs=150.9
Q ss_pred eecccccccCCCCCCcccccccc---CCceEEEEee-CCcchhhhhcC-----CCCCcChHHHHHHHHHHHHHHHhhccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (886)
.+...+|++++..++ ++..... ....+++||| .+++|..++.. ....+++..++.++.||+.||.|||++
T Consensus 54 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~ 132 (273)
T cd05035 54 CMKDFDHPNVMKLIG-VCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR 132 (273)
T ss_pred HHHhCCCCCeeeEEe-eeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445567888888666 4433221 2346888888 88999998832 124689999999999999999999999
Q ss_pred CeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcc
Q 002736 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (886)
Q Consensus 102 giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 181 (886)
||+||||||+||+++.++.+|++|||+++.........
T Consensus 133 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 170 (273)
T cd05035 133 NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYR------------------------------------------ 170 (273)
T ss_pred CeeccccchheEEECCCCeEEECCccceeecccccccc------------------------------------------
Confidence 99999999999999999999999999985432110000
Q ss_pred ccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHH
Q 002736 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (886)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvi 261 (886)
......++..|+|||.+.+..++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i 204 (273)
T cd05035 171 ----------------------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 204 (273)
T ss_pred ----------------------------------------------ccccccCCccccCHhhcccCCCCcccchHHHHHH
Confidence 0000123567999999988889999999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|||++ ||.. .........+.....+..+...++.+.+++.+||..||.+||++.|+++
T Consensus 205 l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 205 MWEIATRGQTPYPG-VENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred HHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999986 5543 3333444444444444445566788899999999999999999999976
No 394
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.93 E-value=1.3e-25 Score=238.80 Aligned_cols=197 Identities=18% Similarity=0.186 Sum_probs=150.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. .+.++++||| .+++|.++|.+. ..+++..++.++.||+.||.|||++||+|+|||
T Consensus 49 ~l~~l~h~~iv~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~ 122 (257)
T cd05060 49 VMAQLDHPCIVRLIG-VCK----GEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDLA 122 (257)
T ss_pred HHHhcCCCCeeeEEE-EEc----CCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcc
Confidence 445567888888766 443 3457889999 788999999665 378999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.+|++|||+++........ +.
T Consensus 123 p~nili~~~~~~kl~df~~~~~~~~~~~~-----------------------------------------------~~-- 153 (257)
T cd05060 123 ARNVLLVNRHQAKISDFGMSRALGAGSDY-----------------------------------------------YR-- 153 (257)
T ss_pred cceEEEcCCCcEEeccccccceeecCCcc-----------------------------------------------cc--
Confidence 99999999999999999998544211000 00
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 154 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g 195 (257)
T cd05060 154 --------------------------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYG 195 (257)
T ss_pred --------------------------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCC
Confidence 0000123456999999988889999999999999999996
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+......+.+...++.+.+++.+||..+|.+||++.++++
T Consensus 196 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 196 AKPYGEMK-GAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CCCcccCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 554333 33333444443333444456678889999999999999999999875
No 395
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=7.6e-26 Score=244.34 Aligned_cols=202 Identities=17% Similarity=0.153 Sum_probs=154.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrD 107 (886)
..+...+|++++..++ .+.+ .+.++++||| .+++|.+++.+. +.+++..+..++.||+.||.|||+ .||+|||
T Consensus 55 ~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d 129 (284)
T cd06620 55 QIMHECRSPYIVSFYG-AFLN---ENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRD 129 (284)
T ss_pred HHHHHcCCCCcceEee-eEec---CCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccC
Confidence 3445567888888777 3433 3678999999 788999988654 568999999999999999999997 6999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.++++|||++.......
T Consensus 130 l~p~nil~~~~~~~~l~d~gl~~~~~~~~--------------------------------------------------- 158 (284)
T cd06620 130 IKPSNILVNSRGQIKLCDFGVSGELINSI--------------------------------------------------- 158 (284)
T ss_pred CCHHHEEECCCCcEEEccCCcccchhhhc---------------------------------------------------
Confidence 99999999999999999999874321000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
....+|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 -----------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~t 197 (284)
T cd06620 159 -----------------------------------------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELAL 197 (284)
T ss_pred -----------------------------------------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHh
Confidence 001267888999999988889999999999999999998
Q ss_pred ---CCCCCchh----------hHHhHhhccCCCChhh-hccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 ---PFSTGEEK----------TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 ---pf~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||...... ......+.....+... ...++.+.+|+.+||.+||.+||++.|+++|+||...
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 198 GKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred CCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 77543321 0111111111112111 1245678899999999999999999999999988654
No 396
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.93 E-value=8.4e-26 Score=241.33 Aligned_cols=204 Identities=15% Similarity=0.201 Sum_probs=153.4
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC--CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
+....|++++..++ .+. ..+.++++||+ .|++|.+++... ...+++..+..++.||+.||.|||++||+|+||
T Consensus 53 l~~l~~~~i~~~~~-~~~---~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l 128 (267)
T cd06610 53 MSQCNHPNVVKYYT-SFV---VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDI 128 (267)
T ss_pred HHhcCCCCEEEEEE-EEe---eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 34457788777665 333 34568889999 789999999543 246899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++..........
T Consensus 129 ~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~------------------------------------------------- 159 (267)
T cd06610 129 KAGNILLGEDGSVKIADFGVSASLADGGDRT------------------------------------------------- 159 (267)
T ss_pred CHHhEEEcCCCCEEEcccchHHHhccCcccc-------------------------------------------------
Confidence 9999999999999999999985442211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~ 267 (886)
........|+..|+|||.+... .++.++|+|||||++|||++
T Consensus 160 -------------------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~ 202 (267)
T cd06610 160 -------------------------------------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT 202 (267)
T ss_pred -------------------------------------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh
Confidence 0000113678899999998876 68999999999999999999
Q ss_pred ---CCCCCchhhHHhHhhccCCC--Chh--hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVL--PPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||............+..... +.. ....++.+.+++.+||..||.+||++.++++||||
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 203 GAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 77554443333333332111 111 12345677899999999999999999999999997
No 397
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93 E-value=7.7e-27 Score=231.76 Aligned_cols=201 Identities=11% Similarity=0.124 Sum_probs=156.1
Q ss_pred cccCCCCCCccccccccCCceEEEEeeC-CcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceee
Q 002736 37 HLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (886)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~i~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll 115 (886)
.+-++.+|| .+. ...-++|+|||| .|++.+.++.+...+++.++..+++..+.||+|||...-||||||..||||
T Consensus 87 S~yVVKYYG-SYF---K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL 162 (502)
T KOG0574|consen 87 SKYVVKYYG-SYF---KHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL 162 (502)
T ss_pred Cchhhhhhh-hhc---cCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE
Confidence 445566666 332 234578899995 489999998777899999999999999999999999999999999999999
Q ss_pred ccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCc
Q 002736 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (886)
Q Consensus 116 ~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (886)
+-+|+.|++|||++-.+... +
T Consensus 163 NT~G~AKLADFGVAGQLTDT-----M------------------------------------------------------ 183 (502)
T KOG0574|consen 163 NTDGIAKLADFGVAGQLTDT-----M------------------------------------------------------ 183 (502)
T ss_pred cccchhhhhhccccchhhhh-----H------------------------------------------------------
Confidence 99999999999998433100 0
Q ss_pred ccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--CCCCCc
Q 002736 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGE 273 (886)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--pf~~~~ 273 (886)
.+..+++|||.|||||++..-.|++++||||||++..||.- |.+..-
T Consensus 184 -------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 184 -------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI 232 (502)
T ss_pred -------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc
Confidence 02234599999999999999889999999999999999998 444443
Q ss_pred hhhHHhHhhccCCCChh--hhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 274 EKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 274 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
...+++..+...+.|.+ +...+.++.+|+..||.+.|++|-||-++++|||++..+..
T Consensus 233 HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 233 HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred cccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 33333333332222211 22234567799999999999999999999999999976544
No 398
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93 E-value=1.6e-25 Score=238.40 Aligned_cols=195 Identities=17% Similarity=0.172 Sum_probs=151.1
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
+...+|++++.+++ ++. ..+.++++||| .+++|.+++.+. ...+++..++.++.||+.||.|||++||+|+|||
T Consensus 56 l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~ 131 (261)
T cd05148 56 LKRLRHKHLISLFA-VCS---VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLA 131 (261)
T ss_pred HhcCCCcchhheee-eEe---cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence 44557888888776 443 34678999999 788999999653 3568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||.+.........
T Consensus 132 ~~nilv~~~~~~kl~d~g~~~~~~~~~~~--------------------------------------------------- 160 (261)
T cd05148 132 ARNILVGEDLVCKVADFGLARLIKEDVYL--------------------------------------------------- 160 (261)
T ss_pred cceEEEcCCceEEEccccchhhcCCcccc---------------------------------------------------
Confidence 99999999999999999998543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 161 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g 201 (261)
T cd05148 161 ---------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYG 201 (261)
T ss_pred ---------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence 000134567999999988889999999999999999996
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+.....++.....++.+.+++.+||..+|.+|||+.++++
T Consensus 202 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 202 QVPYPGMN-NHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCCCCcCC-HHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 564433 33333333333334444566778889999999999999999999875
No 399
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93 E-value=1.1e-25 Score=244.26 Aligned_cols=204 Identities=15% Similarity=0.180 Sum_probs=155.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|++++..++ .+.+ .+.+++++|| .|++|.+++.+ ..+++.+++.++.||+.||.|||++||+|+|||
T Consensus 69 ~l~~l~hp~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~ 142 (293)
T cd06647 69 VMRENKHPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 142 (293)
T ss_pred HHhhcCCCCeeehhh-eeee---CCcEEEEEecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCC
Confidence 344567888877666 4433 3567889998 78999999965 357899999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 143 p~Nili~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------------- 170 (293)
T cd06647 143 SDNILLGMDGSVKLTDFGFCAQITPEQS---------------------------------------------------- 170 (293)
T ss_pred HHHEEEcCCCCEEEccCcceeccccccc----------------------------------------------------
Confidence 9999999999999999998743321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 171 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~ 212 (293)
T cd06647 171 --------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (293)
T ss_pred --------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 0011257888999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCC-CChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcC
Q 002736 268 -PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
||................. ..+......+.+.+++.+||..+|.+||++.+++.|+||.....
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 213 PPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred CCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 7755443322221111111 11112234566889999999999999999999999999987653
No 400
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.93 E-value=2.6e-26 Score=223.58 Aligned_cols=205 Identities=17% Similarity=0.173 Sum_probs=143.1
Q ss_pred cccccCCCCCCcccccc-c-cCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccC--eeec
Q 002736 35 GDHLRNQGGLSGVCENE-A-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVH 106 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~-~-~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~g--iiHr 106 (886)
.+|+++++.+. .+..+ . .....|+++.| ..|||.+.+.. .+..+++.++++||.+|++||.+||+.. .+||
T Consensus 75 f~s~~vl~l~d-h~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~ 153 (302)
T KOG2345|consen 75 FNSPNVLRLVD-HQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHR 153 (302)
T ss_pred hCCcchHHHHH-HHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCccccc
Confidence 57788888776 33322 2 23335666666 88999998842 3347899999999999999999999999 9999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||.|||++.++.++++|||.+......-.. ++.
T Consensus 154 DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~-----------------------~~~---------------------- 188 (302)
T KOG2345|consen 154 DIKPANILLSDSGLPVLMDLGSATQAPIQIEG-----------------------SRQ---------------------- 188 (302)
T ss_pred CCCcceeEecCCCceEEEeccCccccceEeec-----------------------hHH----------------------
Confidence 99999999999999999999998653211000 000
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC---CCCCcccccchHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLF 263 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDIwSlGvil~ 263 (886)
...+.|.. .-.-|..|+|||.+.- ...+.++|||||||+||
T Consensus 189 ---------a~~lQe~a---------------------------~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLY 232 (302)
T KOG2345|consen 189 ---------ALRLQEWA---------------------------EERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLY 232 (302)
T ss_pred ---------HHHHHHHH---------------------------HHhCCCcccCchheecccCcccccccchhhhhHHHH
Confidence 00000000 0133677999999864 33788999999999999
Q ss_pred HHhc---CCCCCchh--hHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 264 ELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 264 eLl~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|+. ||...... ..+..........|.....+..+..+|.+||+.||.+||++.+++.
T Consensus 233 a~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 233 AMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred HHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 9997 87433221 1112222222223333335667789999999999999999999886
No 401
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=9.9e-26 Score=244.71 Aligned_cols=206 Identities=18% Similarity=0.228 Sum_probs=151.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..++ ++. ..+.++++|||.+++|.+++... ...+++..+..++.||+.||.|||++||+||||
T Consensus 53 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl 128 (294)
T PLN00009 53 SLLKEMQHGNIVRLQD-VVH---SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDL 128 (294)
T ss_pred HHHHhccCCCEeeEEE-EEe---cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence 3445567888888777 333 34678999999888999888543 234688899999999999999999999999999
Q ss_pred CCcceeecc-CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 109 RPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 109 kP~NIll~~-~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
||+||+++. .+.+|++|||++...+....
T Consensus 129 ~p~nill~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------------- 158 (294)
T PLN00009 129 KPQNLLIDRRTNALKLADFGLARAFGIPVR-------------------------------------------------- 158 (294)
T ss_pred CcceEEEECCCCEEEEcccccccccCCCcc--------------------------------------------------
Confidence 999999985 45799999999854322100
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHh
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl 266 (886)
......+++.|+|||.+.+. .++.++|||||||++|+|+
T Consensus 159 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~ 198 (294)
T PLN00009 159 ----------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMV 198 (294)
T ss_pred ----------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 00112568889999998764 4899999999999999999
Q ss_pred c---CCCCCchhhHHhHhhcc--CC---------------------CCh----hhhccChhhHHHHHHccCCCCCCCCCH
Q 002736 267 C---PFSTGEEKTRTMSSLRH--RV---------------------LPP----QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~--~~---------------------~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
+ ||............... .. .+. ......+.+.+++.+||..+|.+||++
T Consensus 199 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~ 278 (294)
T PLN00009 199 NQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA 278 (294)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCH
Confidence 9 66544333222221110 00 000 012345667899999999999999999
Q ss_pred HHHhcCCCCCCCc
Q 002736 317 GELLQSEFLNEPR 329 (886)
Q Consensus 317 ~eil~h~~~~~~~ 329 (886)
.++++||||....
T Consensus 279 ~~~l~~~~~~~~~ 291 (294)
T PLN00009 279 RAALEHEYFKDLG 291 (294)
T ss_pred HHHhcCchHhHHh
Confidence 9999999998653
No 402
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-26 Score=268.63 Aligned_cols=201 Identities=16% Similarity=0.216 Sum_probs=164.8
Q ss_pred cCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC------CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~------~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.+.+..++.+|+|++.+.| +|.+ ....+|++|| .||+|..||++. ...++..+.+.++.||+.|++||+
T Consensus 744 ~Ea~~m~~f~HpNiv~liG-v~l~---~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe 819 (1025)
T KOG1095|consen 744 KEALLMSKFDHPNIVSLIG-VCLD---SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE 819 (1025)
T ss_pred HHHHHHhcCCCcceeeEEE-eecC---CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH
Confidence 5567788899999999877 8986 4667778888 999999999876 677899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++++|||||-..|.||+....|||+|||+|+++-..+... +
T Consensus 820 ~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr----~----------------------------------- 860 (1025)
T KOG1095|consen 820 SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYR----K----------------------------------- 860 (1025)
T ss_pred hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchhee----c-----------------------------------
Confidence 9999999999999999999999999999998542221100 0
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
....+-...|||||.+....+|.++||||||
T Consensus 861 -------------------------------------------------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFG 891 (1025)
T KOG1095|consen 861 -------------------------------------------------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFG 891 (1025)
T ss_pred -------------------------------------------------cCccccceecCCHHHHhhcccccccchhhhH
Confidence 0000223459999999999999999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhH-hhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMS-SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|+|||+|+ || +......++. .+... .-+.+..++..+.+++..||+.+|++||++..|++
T Consensus 892 VllWEifslG~~PY-~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 892 VLLWEIFSLGATPY-PSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHHHhCCCCCC-CCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 99999999 66 4555555555 44444 55566678888899999999999999999999987
No 403
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=1.6e-25 Score=236.96 Aligned_cols=197 Identities=16% Similarity=0.162 Sum_probs=151.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|++++..++ +|.+ .+.++++||| .|++|.+++......+++..++.++.||+.+|.|+|++|++|||||
T Consensus 45 ~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~ 120 (250)
T cd05085 45 ILKQYDHPNIVKLIG-VCTQ---RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLA 120 (250)
T ss_pred HHHhCCCCCcCeEEE-EEec---CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence 445567888888776 5543 4568899999 8899999996655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++.........
T Consensus 121 p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------------------------------------------- 149 (250)
T cd05085 121 ARNCLVGENNVLKISDFGMSRQEDDGIYS--------------------------------------------------- 149 (250)
T ss_pred hheEEEcCCCeEEECCCccceeccccccc---------------------------------------------------
Confidence 99999999999999999988432110000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 150 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g 191 (250)
T cd05085 150 --------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLG 191 (250)
T ss_pred --------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCC
Confidence 0000123456999999988889999999999999999997
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+............++.+.+++.+||..+|.+||++.++++
T Consensus 192 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 192 VCPYPGMTN-QQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 6654433 3333344433333334456678899999999999999999999876
No 404
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.93 E-value=1.3e-25 Score=241.53 Aligned_cols=199 Identities=13% Similarity=0.089 Sum_probs=151.4
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
..+...+|++++..++ ++. ....++++||| .+++|.++|... ...+++..++.++.||+.||.|||
T Consensus 61 ~~l~~~~~~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 136 (277)
T cd05032 61 SVMKEFNCHHVVRLLG-VVS---TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA 136 (277)
T ss_pred HHHHhCCCCceeEEEE-EEc---CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3445567888888776 443 23678899999 689999999532 124678899999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
+.||+||||||+||+++.++.+|++|||+++.........
T Consensus 137 ~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~---------------------------------------- 176 (277)
T cd05032 137 AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYR---------------------------------------- 176 (277)
T ss_pred hCCccccccChheEEEcCCCCEEECCcccchhhccCcccc----------------------------------------
Confidence 9999999999999999999999999999985432110000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 177 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 208 (277)
T cd05032 177 ------------------------------------------------KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFG 208 (277)
T ss_pred ------------------------------------------------cCCCCCccccccCHHHHhcCCCCcccchHHHH
Confidence 00011456779999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||... ........+.....++.+...++.+.+++.+||..+|.+|||+.+++.
T Consensus 209 ~il~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 209 VVLWEMATLAEQPYQGL-SNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHhhccCCCCCccC-CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999996 55433 333344444444344444455678889999999999999999999976
No 405
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=5.2e-26 Score=250.96 Aligned_cols=210 Identities=17% Similarity=0.129 Sum_probs=149.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ ++.. .+.++++||| .+++|.+++.+. ...+++..++.++.||+.||+|||++||+||||
T Consensus 52 ~~~~l~h~niv~~~~-~~~~---~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDl 127 (328)
T cd08226 52 LSHFFRHPNIMTSWT-VFTT---GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNI 127 (328)
T ss_pred HHHhCCCCCcceEee-eEec---CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 344567888888777 4443 4678889999 778999998653 245899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.++++||+.+......... ...
T Consensus 128 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~------------ 160 (328)
T cd08226 128 KASHILISGDGLVSLSGLSHLYSLVRNGQK-----------------------------------AKV------------ 160 (328)
T ss_pred CHHHEEEeCCCcEEEechHHHhhhhccCcc-----------------------------------ccc------------
Confidence 999999999999999998765221100000 000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC--CCCcccccchHHHHHHHHh
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDIwSlGvil~eLl 266 (886)
. .. ......++..|+|||++.+. .++.++|||||||++|||+
T Consensus 161 ---------~------------------------~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~ 204 (328)
T cd08226 161 ---------V------------------------YD---FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELA 204 (328)
T ss_pred ---------c------------------------cc---ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHH
Confidence 0 00 00001345679999999764 3789999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCC---------------------------------------------ChhhhccChhh
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVL---------------------------------------------PPQLLLKFPKE 298 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~ 298 (886)
+ ||............+..... .+......+.+
T Consensus 205 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (328)
T cd08226 205 TGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAF 284 (328)
T ss_pred hCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHH
Confidence 8 66544333332222211110 01112234567
Q ss_pred HHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 299 ~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
.+|+.+||..||.+|||+.|+|+||||..
T Consensus 285 ~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 285 QNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred HHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 89999999999999999999999999864
No 406
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.93 E-value=9e-26 Score=244.00 Aligned_cols=203 Identities=17% Similarity=0.222 Sum_probs=156.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ .+.. .+..++++|| .|++|.+++......++..++..++.||+.||.|||+.||+|+||+
T Consensus 68 ~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~ 143 (286)
T cd06614 68 IMKDCKHPNIVDYYD-SYLV---GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIK 143 (286)
T ss_pred HHHHCCCCCeeEEEE-EEEE---CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 445567888887666 3333 3678888998 7799999997654478999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 144 p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------------- 171 (286)
T cd06614 144 SDNILLSKDGSVKLADFGFAAQLTKEKS---------------------------------------------------- 171 (286)
T ss_pred hhhEEEcCCCCEEECccchhhhhccchh----------------------------------------------------
Confidence 9999999999999999998743211100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 172 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~ 213 (286)
T cd06614 172 --------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213 (286)
T ss_pred --------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence 0011256788999999988889999999999999999998
Q ss_pred -CCCCCchhhHHhHhhccCCCCh--hhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||......... ..+.....++ .....+..+.+++.+||..+|.+||++.++++|+||...
T Consensus 214 ~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 214 PPYLREPPLRAL-FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred CCCCCCCHHHHH-HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 66544333222 2222222221 112245678899999999999999999999999999873
No 407
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93 E-value=1.5e-25 Score=239.98 Aligned_cols=197 Identities=19% Similarity=0.161 Sum_probs=152.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+....|++++.+++ +|.+ ..++++||| .+++|.+++.+....+++..++.++.||+.||+|||++|++|+||
T Consensus 59 ~~l~~~~h~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl 133 (270)
T cd05056 59 YIMRQFDHPHIVKLIG-VITE----NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDI 133 (270)
T ss_pred HHHHhCCCCchhceeE-EEcC----CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 3455567888888776 6653 456788888 789999999765567899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++..+.+|++|||+++........
T Consensus 134 ~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------------------------------------------------- 163 (270)
T cd05056 134 AARNVLVSSPDCVKLGDFGLSRYLEDESYY-------------------------------------------------- 163 (270)
T ss_pred ChheEEEecCCCeEEccCceeeecccccce--------------------------------------------------
Confidence 999999999999999999988533111000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
..+...++..|+|||.+....++.++|||||||++|||++
T Consensus 164 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 204 (270)
T cd05056 164 ---------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILML 204 (270)
T ss_pred ---------------------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHc
Confidence 0000123567999999988889999999999999999885
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||......... ..+.....++.+...++.+.+++.+||..+|.+||++.+++.
T Consensus 205 g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 205 GVKPFQGVKNNDVI-GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred CCCCCCCCCHHHHH-HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 77554443333 333333333444556678889999999999999999999876
No 408
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.93 E-value=1.4e-25 Score=249.21 Aligned_cols=206 Identities=16% Similarity=0.222 Sum_probs=153.6
Q ss_pred eeecccccccCCCCCCccccccc---cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 30 VELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
..+.+.+|++++..++ ++.... ....+|+++++.|++|.++++. ..+++..++.++.||+.||.|||++||+||
T Consensus 68 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 144 (345)
T cd07877 68 RLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR 144 (345)
T ss_pred HHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 3455568888888766 443322 2345789999999999998854 358999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++.++.+|++|||++......
T Consensus 145 dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 173 (345)
T cd07877 145 DLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------------- 173 (345)
T ss_pred CCChHHEEEcCCCCEEEeccccccccccc---------------------------------------------------
Confidence 99999999999999999999988432110
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHH
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eL 265 (886)
.....++++|+|||.+.+ ..++.++|||||||++|||
T Consensus 174 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el 211 (345)
T cd07877 174 ------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 211 (345)
T ss_pred ------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHH
Confidence 011267889999999876 4589999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhc--cC----------------------CCC-----hhhhccChhhHHHHHHccCCCCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLR--HR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP~~R 313 (886)
++ ||............+. .. ..+ ......++.+.+||.+||++||.+|
T Consensus 212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 291 (345)
T cd07877 212 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 291 (345)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhc
Confidence 98 6643322111111000 00 000 0111245677899999999999999
Q ss_pred CCHHHHhcCCCCCCCcCc
Q 002736 314 PKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 314 ps~~eil~h~~~~~~~~~ 331 (886)
|++.++++||||.....+
T Consensus 292 ~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 292 ITAAQALAHAYFAQYHDP 309 (345)
T ss_pred CCHHHHhcChhhhhcCCC
Confidence 999999999999865443
No 409
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.7e-25 Score=245.22 Aligned_cols=193 Identities=16% Similarity=0.179 Sum_probs=146.5
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|++++..++ +|.+ .+.++++||| .+++|.++|... ...++..+++.++.||+.||.|||
T Consensus 76 ~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH 151 (314)
T cd05099 76 KHKNIINLLG-VCTQ---EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE 151 (314)
T ss_pred CCCCeeeEEE-EEcc---CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 5888888776 5543 3568899999 789999999542 135788999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+|||++.++.+|++|||+++.........
T Consensus 152 ~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~---------------------------------------- 191 (314)
T cd05099 152 SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK---------------------------------------- 191 (314)
T ss_pred HCCeeeccccceeEEEcCCCcEEEcccccccccccccccc----------------------------------------
Confidence 9999999999999999999999999999986442110000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 223 (314)
T cd05099 192 ------------------------------------------------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFG 223 (314)
T ss_pred ------------------------------------------------ccccCCCCccccCHHHHccCCcCccchhhHHH
Confidence 00001234569999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||.... .......+.....+......+.++.+++.+||..+|.+||++.++++
T Consensus 224 ~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 224 ILMWEIFTLGGSPYPGIP-VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999997 564332 23333333333333333445667889999999999999999999886
No 410
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.93 E-value=1.4e-25 Score=249.02 Aligned_cols=209 Identities=15% Similarity=0.142 Sum_probs=150.2
Q ss_pred ecccccccCCCCCCccccccc-----------cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 32 LTHGDHLRNQGGLSGVCENEA-----------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
+...+|++++..+. ++.+.. +...++++|||.+++|.+++.. ..+++..++.++.||++||.|||+
T Consensus 56 l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~ 132 (342)
T cd07854 56 IRRLDHDNIVKVYE-VLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHS 132 (342)
T ss_pred HHhcCCCcchhhHh-hhcccccccccccccccccceEEEEeecccccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 44557888877665 332221 1245789999988899998854 468999999999999999999999
Q ss_pred cCeeecccCCcceeecc-CCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 101 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~-~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
+||+||||||+||+++. ++.+|++|||.++........
T Consensus 133 ~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------- 171 (342)
T cd07854 133 ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH----------------------------------------- 171 (342)
T ss_pred CCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc-----------------------------------------
Confidence 99999999999999974 557899999988533111000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRL 258 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSl 258 (886)
........++.+|+|||.+.+ ..++.++|||||
T Consensus 172 ----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSl 205 (342)
T cd07854 172 ----------------------------------------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA 205 (342)
T ss_pred ----------------------------------------------ccccccccccccccCHHHHhCccccCchhhHHHH
Confidence 000011256889999998765 458899999999
Q ss_pred HHHHHHHhc---CCCCCchhhHHhHhhccCC--------------------------CC--hhhhccChhhHHHHHHccC
Q 002736 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--------------------------LP--PQLLLKFPKEASFCLWLLH 307 (886)
Q Consensus 259 Gvil~eLl~---pf~~~~~~~~~~~~~~~~~--------------------------~~--~~~~~~~~~~~~li~~~L~ 307 (886)
||++|||++ ||............+.... .+ ........++.+|+.+||.
T Consensus 206 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 285 (342)
T cd07854 206 GCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILT 285 (342)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhC
Confidence 999999999 7755543332222111100 00 0112344667799999999
Q ss_pred CCCCCCCCHHHHhcCCCCCCCcC
Q 002736 308 PEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 308 ~dP~~Rps~~eil~h~~~~~~~~ 330 (886)
.||.+|||+.++++||||+....
T Consensus 286 ~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 286 FNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred CCchhccCHHHHhCCCccccccC
Confidence 99999999999999999986433
No 411
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.3e-25 Score=245.44 Aligned_cols=193 Identities=17% Similarity=0.192 Sum_probs=147.7
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|++++..++ +|.+ .+.++++||| .+++|.++|.+. ...++..+++.++.||+.||+|||
T Consensus 82 ~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH 157 (307)
T cd05098 82 KHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA 157 (307)
T ss_pred CCCCEeeEEE-EEec---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6888877666 4433 4578889999 778999999542 135788999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+||+++.++.+|++|||++..........
T Consensus 158 ~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~---------------------------------------- 197 (307)
T cd05098 158 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK---------------------------------------- 197 (307)
T ss_pred HCCcccccccHHheEEcCCCcEEECCCcccccccccchhh----------------------------------------
Confidence 9999999999999999999999999999985432110000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 198 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG 229 (307)
T cd05098 198 ------------------------------------------------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 229 (307)
T ss_pred ------------------------------------------------ccccCCCccceeChHHhccCCCCcHHHHHHHH
Confidence 00001234679999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||. ..........+.....++.+......+.+|+.+||..+|.+||++.++++
T Consensus 230 ~~l~el~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 230 VLLWEIFTLGGSPYP-GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHHcCCCCCCC-cCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999986 553 33333444444444444444456678889999999999999999999986
No 412
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.2e-27 Score=247.06 Aligned_cols=184 Identities=17% Similarity=0.189 Sum_probs=149.7
Q ss_pred CceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCC
Q 002736 55 DPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (886)
Q Consensus 55 ~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~ 133 (886)
...|+.||. .||.|...|++. +.++...++.|+..+++|++|||++|||.|||||+|.||+..|.+|+.|||+|+.++
T Consensus 493 kyvYmLmEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 345556666 999999999665 689999999999999999999999999999999999999999999999999998765
Q ss_pred CCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccccccccccc
Q 002736 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (886)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (886)
...
T Consensus 572 ~g~----------------------------------------------------------------------------- 574 (732)
T KOG0614|consen 572 SGR----------------------------------------------------------------------------- 574 (732)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 432
Q ss_pred ccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChh
Q 002736 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290 (886)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~ 290 (886)
++-+++|||.|.|||++.+..-+.++|.||||+++||||+ ||...........+++.-.....
T Consensus 575 --------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~ 640 (732)
T KOG0614|consen 575 --------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEF 640 (732)
T ss_pred --------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhc
Confidence 3345699999999999999989999999999999999999 66544444433334433222223
Q ss_pred hhccChhhHHHHHHccCCCCCCCCC-----HHHHhcCCCCCCCcC
Q 002736 291 LLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (886)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~~ 330 (886)
+......+.+||.+++..+|.+|.. +.+|.+|.||.....
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 3334456779999999999999965 789999999987643
No 413
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.93 E-value=1e-25 Score=241.05 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=152.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+.+.+|++++..++ ++. ..+.++++||| .|++|.+++.+....++..++..|+.||+.||.|||++||+||||
T Consensus 57 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl 132 (267)
T cd05066 57 SIMGQFDHPNIIHLEG-VVT---KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 132 (267)
T ss_pred HHHHhCCCCCcceEEE-EEe---cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhh
Confidence 3445567899888766 443 34678889998 688999999766567899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.++++|||++......... .
T Consensus 133 kp~nili~~~~~~~l~dfg~~~~~~~~~~~--~----------------------------------------------- 163 (267)
T cd05066 133 AARNILVNSNLVCKVSDFGLSRVLEDDPEA--A----------------------------------------------- 163 (267)
T ss_pred chhcEEECCCCeEEeCCCCcccccccccce--e-----------------------------------------------
Confidence 999999999999999999998644211000 0
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 --------------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~ 205 (267)
T cd05066 164 --------------------------------------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 205 (267)
T ss_pred --------------------------------------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcC
Confidence 00000133567999999998889999999999999999885
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||....... ....+.....++.....++.+.+++.+||+++|.+||++.++++
T Consensus 206 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 206 GERPYWEMSNQD-VIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CCCCcccCCHHH-HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 664443322 23333333333444456678889999999999999999999876
No 414
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.93 E-value=9.9e-26 Score=239.27 Aligned_cols=196 Identities=19% Similarity=0.201 Sum_probs=152.8
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
+...+|++++...+ .+. ..+.++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++||+|+|||
T Consensus 52 l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~ 127 (255)
T cd08219 52 LAKMKHPNIVAFKE-SFE---ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIK 127 (255)
T ss_pred HHhCCCCCcceEEE-EEE---ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 44567888877666 332 34678999999 78899998854 33568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||.+........
T Consensus 128 p~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 155 (255)
T cd08219 128 SKNIFLTQNGKVKLGDFGSARLLTSPGA---------------------------------------------------- 155 (255)
T ss_pred cceEEECCCCcEEEcccCcceeeccccc----------------------------------------------------
Confidence 9999999999999999998853321100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 156 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~ 197 (255)
T cd08219 156 --------------------------------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLK 197 (255)
T ss_pred --------------------------------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhcc
Confidence 0011367888999999988889999999999999999998
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
||........ ...+.....++.....+..+.+|+.+||+.||.+||++.+++.-
T Consensus 198 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 198 HPFQANSWKNL-ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCCHHHH-HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 7765443333 33333444444444456778899999999999999999999864
No 415
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=1.6e-25 Score=237.05 Aligned_cols=205 Identities=18% Similarity=0.209 Sum_probs=151.4
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
.|+.|.+ .+...+|++++..++ ++. ....++++||| .|++|.+++.+....++...+..++.|+++||.|||+
T Consensus 38 ~~~~e~~--~l~~l~~~~i~~~~~-~~~---~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~ 111 (251)
T cd05041 38 KFLQEAE--ILKQYDHPNIVKLIG-VCV---QKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLES 111 (251)
T ss_pred HHHHHHH--HHHhCCCCCeEEEEE-EEe---cCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3444443 344557887777555 433 34567888998 7899999996655678999999999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
+||+||||||+||+++.++.+|++|||++..........
T Consensus 112 ~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~----------------------------------------- 150 (251)
T cd05041 112 KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV----------------------------------------- 150 (251)
T ss_pred CCEehhhcCcceEEEcCCCcEEEeeccccccccCCccee-----------------------------------------
Confidence 999999999999999999999999999985432110000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
.......+..|+|||.+.+..++.++|||||||
T Consensus 151 -----------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~ 183 (251)
T cd05041 151 -----------------------------------------------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGI 183 (251)
T ss_pred -----------------------------------------------ccccCcceeccCChHhhccCCCCcchhHHHHHH
Confidence 000002245599999998888999999999999
Q ss_pred HHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 261 il~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++|||++ ||..... ......+......+.....+..+.+++.+||..+|.+||++.|+++
T Consensus 184 i~~~l~t~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 184 LLWETFSLGDTPYPGMSN-QQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHHHHHhccCCCCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999997 5544433 2223333332222333345677889999999999999999999986
No 416
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=1.8e-25 Score=237.16 Aligned_cols=200 Identities=22% Similarity=0.283 Sum_probs=156.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---CCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
.+...+|++++...+. .. ..+.+++++|+ .|++|.+++.+. ...+++.++..++.||+.||.|||++||+|+
T Consensus 52 ~l~~l~~~~~~~~~~~-~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~ 127 (258)
T cd08215 52 ILKKLNHPNIIKYYES-FE---EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHR 127 (258)
T ss_pred HHHhcCCCChhheEEE-Ee---cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence 3445568888776662 22 23678889998 778999999654 3678999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||+|+||+++.++.++++|||.+........
T Consensus 128 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 158 (258)
T cd08215 128 DIKPQNIFLTSNGLVKLGDFGISKVLSSTVD------------------------------------------------- 158 (258)
T ss_pred cCChHHeEEcCCCcEEECCccceeecccCcc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......|++.|+|||.+.+..++.++|+||||+++|+|+
T Consensus 159 -----------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 197 (258)
T cd08215 159 -----------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC 197 (258)
T ss_pred -----------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHH
Confidence 001126788899999998888999999999999999999
Q ss_pred c---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
+ ||.... .......+.....++........+.+++.+||..+|.+||++.++|+||||
T Consensus 198 ~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 198 TLKHPFEGEN-LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cCCCCCCCCc-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 9 664443 333333333333444444556778899999999999999999999999997
No 417
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=3.2e-24 Score=213.10 Aligned_cols=278 Identities=19% Similarity=0.287 Sum_probs=229.2
Q ss_pred ccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEc------Ccc----------c
Q 002736 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC------DAI----------I 601 (886)
Q Consensus 538 ~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~------~~~----------~ 601 (886)
++..|.+..+|.+.++++..++ .+|.+.|.||+|++.+.+++|++.|++-.||.. ... .
T Consensus 165 tASADhTA~iWs~Esg~CL~~Y-----~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE 239 (481)
T KOG0300|consen 165 TASADHTARIWSLESGACLATY-----TGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEE 239 (481)
T ss_pred ecccccceeEEeeccccceeee-----cccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhh
Confidence 4567999999999999999888 689999999999999999999999999999972 110 0
Q ss_pred Cc-------------cc---ccccceEE-ecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEE
Q 002736 602 NE-------------NR---DIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW 664 (886)
Q Consensus 602 ~~-------------~~---~~~~~~~~-~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~ 664 (886)
.+ .. .+..|+.. .+|.+.|.+..|-. .+..++++++|.+..+||++++.++..+.+|....+
T Consensus 240 ~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELt 318 (481)
T KOG0300|consen 240 EEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELT 318 (481)
T ss_pred hhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhcc
Confidence 00 00 11123333 35889999999987 789999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC
Q 002736 665 SIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK 743 (886)
Q Consensus 665 ~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~ 743 (886)
.++-+| ...++++.+.|.+.+|||++.. -..+..+. |...|+++.|..+ ..+++||.|.+|++||+++.+
T Consensus 319 HcstHp-tQrLVvTsSrDtTFRLWDFRea------I~sV~VFQGHtdtVTS~vF~~d--d~vVSgSDDrTvKvWdLrNMR 389 (481)
T KOG0300|consen 319 HCSTHP-TQRLVVTSSRDTTFRLWDFREA------IQSVAVFQGHTDTVTSVVFNTD--DRVVSGSDDRTVKVWDLRNMR 389 (481)
T ss_pred ccccCC-cceEEEEeccCceeEeccchhh------cceeeeecccccceeEEEEecC--CceeecCCCceEEEeeecccc
Confidence 999998 8889999999999999999953 34455555 4567999999987 569999999999999999999
Q ss_pred cceEEEecCCCCeEEEEecCCC-EEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCC--CEEEEEcC
Q 002736 744 IPLCTLIGHNKTVSYVKFVDAT-TLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD--GYVATGSE 820 (886)
Q Consensus 744 ~~~~~~~~h~~~V~~v~f~~~~-~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g--~~lasgs~ 820 (886)
.|+.++.. ..+++.++.+.|. .|+.-..+..|++||++..... .-|-..-+||..-|.|++|..+- .-|.+++.
T Consensus 390 splATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rla--RlPrtsRqgHrRMV~c~AW~eehp~cnLftcGF 466 (481)
T KOG0300|consen 390 SPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLA--RLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGF 466 (481)
T ss_pred Ccceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccc--cCCcccccccceeeeeeeccccCcccccccccc
Confidence 99999875 4688999998554 7777777889999999865421 12344667999999999998764 36788999
Q ss_pred CCcEEEEecCCCC
Q 002736 821 TNEVFVYHKAFPM 833 (886)
Q Consensus 821 Dg~v~iwd~~~~~ 833 (886)
|..+.=|.+..++
T Consensus 467 DR~v~gW~in~p~ 479 (481)
T KOG0300|consen 467 DRMVAGWKINTPT 479 (481)
T ss_pred cceeeeeEecccC
Confidence 9999999988754
No 418
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.93 E-value=1.2e-25 Score=248.91 Aligned_cols=220 Identities=17% Similarity=0.179 Sum_probs=157.5
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
..+...+|++++..++ ++. ..+.++++|||.+++|.+++... ..+++..+..++.||+.||.|||++||+|+|||
T Consensus 72 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~ 146 (335)
T PTZ00024 72 KIMNEIKHENIMGLVD-VYV---EGDFINLVMDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLS 146 (335)
T ss_pred HHHHhCCCcceeeeeE-EEe---cCCcEEEEEeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 3455677888888776 443 34678999999888999999553 568999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++..+.++++|||.+...+.+........ +...
T Consensus 147 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~---------------- 184 (335)
T PTZ00024 147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM---------------- 184 (335)
T ss_pred HHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc----------------
Confidence 9999999999999999999865543321100000 0000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~- 267 (886)
..........++++|+|||.+.+.. ++.++|||||||++|||++
T Consensus 185 ----------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 185 ----------------------------------QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred ----------------------------------cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 0000011125688999999997744 7999999999999999999
Q ss_pred --CCCCCchhhHHhHhhcc---CCC--------------------Ch----hhhccChhhHHHHHHccCCCCCCCCCHHH
Q 002736 268 --PFSTGEEKTRTMSSLRH---RVL--------------------PP----QLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---~~~--------------------~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e 318 (886)
||...... ..+..+.. ... ++ ........+.+++.+||..+|.+||+++|
T Consensus 231 ~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 309 (335)
T PTZ00024 231 KPLFPGENEI-DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKE 309 (335)
T ss_pred CCCCCCCCHH-HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHH
Confidence 55444332 22211110 000 00 11123456789999999999999999999
Q ss_pred HhcCCCCCCCcCc
Q 002736 319 LLQSEFLNEPRDS 331 (886)
Q Consensus 319 il~h~~~~~~~~~ 331 (886)
+|.||||+.....
T Consensus 310 ~l~~~~~~~~~~~ 322 (335)
T PTZ00024 310 ALKHEYFKSDPLP 322 (335)
T ss_pred HhcCcccCCCCCC
Confidence 9999999876543
No 419
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=1.9e-25 Score=240.22 Aligned_cols=201 Identities=19% Similarity=0.204 Sum_probs=155.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+. ..+.++++||| .+++|.+++.. ..+++..+..++.||+.+|.|||+.||+|+|||
T Consensus 55 ~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~ 128 (277)
T cd06641 55 VLSQCDSPYVTKYYG-SYL---KDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIK 128 (277)
T ss_pred HHHhcCCCCEeEEEE-EEE---eCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCC
Confidence 445667888888776 332 34678899999 77899999854 468999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 129 p~Ni~i~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 156 (277)
T cd06641 129 AANVLLSEHGEVKLADFGVAGQLTDTQI---------------------------------------------------- 156 (277)
T ss_pred HHhEEECCCCCEEEeecccceecccchh----------------------------------------------------
Confidence 9999999999999999998743311100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++.+|+|||.+.+..++.++|+|||||++|+|++
T Consensus 157 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~ 198 (277)
T cd06641 157 --------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198 (277)
T ss_pred --------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 0011257888999999988888999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 328 (886)
||...... .....+.....+.........+.+++.+||..+|.+||++.++++||||...
T Consensus 199 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 199 PPHSELHPM-KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CCCCccchH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 66433322 2222222222332333455678899999999999999999999999999864
No 420
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=1.6e-25 Score=239.87 Aligned_cols=190 Identities=15% Similarity=0.161 Sum_probs=143.6
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC---------------CCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|++++..++ +|. ..+.++++||| .+++|.++|.+.. ..+++..++.++.||+.||+|||
T Consensus 54 ~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH 129 (270)
T cd05047 54 HHPNIINLLG-ACE---HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 129 (270)
T ss_pred cCCCeeeEEE-EEe---cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6788887666 443 34567899999 7899999985421 24789999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+||+++.++.+|++|||++.......
T Consensus 130 ~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~------------------------------------------- 166 (270)
T cd05047 130 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------------------- 166 (270)
T ss_pred HCCEeecccccceEEEcCCCeEEECCCCCccccchhh-------------------------------------------
Confidence 9999999999999999999999999999874210000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
.......+..|+|||.+.+..++.++||||||
T Consensus 167 ------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 198 (270)
T cd05047 167 ------------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 198 (270)
T ss_pred ------------------------------------------------hccCCCCccccCChHHHccCCCCchhhHHHHH
Confidence 00000224569999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||..... ......+......+........+.+++.+||..+|.+||++.++++
T Consensus 199 ~il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 199 VLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred HHHHHHHcCCCCCccccCH-HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 99999995 6644332 2333333333233333345677889999999999999999999976
No 421
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=1.4e-25 Score=238.81 Aligned_cols=196 Identities=13% Similarity=0.117 Sum_probs=149.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ ++. .+..+++||| .+++|.+++.+. ...+++..++.++.||+.||.|||++||+||||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di 128 (260)
T cd05070 54 IMKKLRHDKLVQLYA-VVS----EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDL 128 (260)
T ss_pred HHHhcCCCceEEEEe-EEC----CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 445567888877666 332 2446789998 788999999653 356899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++.........
T Consensus 129 ~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------- 158 (260)
T cd05070 129 RSANILVGDGLVCKIADFGLARLIEDNEYT-------------------------------------------------- 158 (260)
T ss_pred ccceEEEeCCceEEeCCceeeeeccCcccc--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~ 199 (260)
T cd05070 159 ---------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK 199 (260)
T ss_pred ---------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhc
Confidence 0000134567999999988889999999999999999997
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||... ........+.....++.....+..+.+|+.+||.++|.+|||+.+++.
T Consensus 200 g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 200 GRVPYPGM-NNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CCCCCCCC-CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 55433 333344444444344444556678889999999999999999998864
No 422
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93 E-value=1.5e-25 Score=242.89 Aligned_cols=205 Identities=17% Similarity=0.291 Sum_probs=157.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|++++..+. .+. ..+.++++||| .+++|.+++.. ..+++..++.++.||+.||.|||++||+|+||
T Consensus 69 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl 142 (292)
T cd06657 69 VIMRDYQHENVVEMYN-SYL---VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDI 142 (292)
T ss_pred HHHHhcCCcchhheee-EEE---eCCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 4455677888888776 332 34678999999 78899998854 35899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++........
T Consensus 143 ~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 171 (292)
T cd06657 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVP--------------------------------------------------- 171 (292)
T ss_pred CHHHEEECCCCCEEEcccccceecccccc---------------------------------------------------
Confidence 99999999999999999998743211100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......|++.|+|||.+.+..++.++||||+||++|||++
T Consensus 172 ---------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg 212 (292)
T cd06657 172 ---------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212 (292)
T ss_pred ---------------------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 0011257888999999988889999999999999999998
Q ss_pred --CCCCCchhhHHhHhhccCCC--ChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCCCcCc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~~ 331 (886)
||..... ......+..... ........+.+.+++.+||..+|.+||++.++++||||.....+
T Consensus 213 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 213 EPPYFNEPP-LKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred CCCCCCCCH-HHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 6654332 222222322211 11223456778899999999999999999999999999876543
No 423
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93 E-value=1.4e-25 Score=239.28 Aligned_cols=196 Identities=14% Similarity=0.110 Sum_probs=148.8
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ .+. .+.++++||| .+++|.+++.+. ...+++..++.++.||+.||.|||+.||+||||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl 128 (262)
T cd05071 54 VMKKLRHEKLVQLYA-VVS----EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 128 (262)
T ss_pred HHHhCCCCCcceEEE-EEC----CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 444567888888766 332 3457899999 778999999653 345789999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++|+|||.+.........
T Consensus 129 ~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-------------------------------------------------- 158 (262)
T cd05071 129 RAANILVGENLVCKVADFGLARLIEDNEYT-------------------------------------------------- 158 (262)
T ss_pred CcccEEEcCCCcEEeccCCceeeccccccc--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~ 199 (262)
T cd05071 159 ---------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 199 (262)
T ss_pred ---------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcC
Confidence 0000135677999999988889999999999999999997
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||...... ..+..+......+.....+..+.+++.+||+.+|.+||++.++++
T Consensus 200 g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 200 GRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 66444333 233333333223333455677889999999999999999999875
No 424
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=2.2e-25 Score=235.54 Aligned_cols=198 Identities=18% Similarity=0.248 Sum_probs=151.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+.+ .+.. ....++++|| .|++|.+++......+++.++..++.||+.||.|||++|++|+||+
T Consensus 50 ~l~~l~~~~i~~~~~-~~~~---~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~ 125 (253)
T cd05122 50 ILKKCKHPNIVKYYG-SYLK---KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIK 125 (253)
T ss_pred HHHhCCCCCEeEEEE-EEec---CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCC
Confidence 344455777777665 3332 3567888998 7799999996655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++|+|||.+........
T Consensus 126 p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------------- 153 (253)
T cd05122 126 AANILLTSDGEVKLIDFGLSAQLSDTKA---------------------------------------------------- 153 (253)
T ss_pred HHHEEEccCCeEEEeecccccccccccc----------------------------------------------------
Confidence 9999999999999999998854422100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....++..|+|||.+.+..++.++||||||+++|+|++
T Consensus 154 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~ 194 (253)
T cd05122 154 ---------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194 (253)
T ss_pred ---------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence 011256788999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccCCCChhhhc--cChhhHHHHHHccCCCCCCCCCHHHHhcCCC
Q 002736 268 -PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 324 (886)
||.............. ...+..... ....+.+++.+||..||++|||+.|+++|||
T Consensus 195 ~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 195 PPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 6654433222222221 222222112 2567889999999999999999999999998
No 425
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.93 E-value=2.4e-25 Score=240.83 Aligned_cols=201 Identities=16% Similarity=0.220 Sum_probs=146.8
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCc
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~ 111 (886)
+....|++++..++ ++.+ .+.++++|||.++++.+.+......+++.++..++.||+.||.|||++||+|+||+|+
T Consensus 54 l~~l~~~~i~~~~~-~~~~---~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ 129 (288)
T cd07833 54 LRQLRHENIVNLKE-AFRR---KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPE 129 (288)
T ss_pred HHhcCCCCeeehhh-eEEE---CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 33445777777666 4432 5678999999555555544344456899999999999999999999999999999999
Q ss_pred ceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCC
Q 002736 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (886)
Q Consensus 112 NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (886)
||+++.++.+|++|||++........
T Consensus 130 ni~~~~~~~~kl~d~g~~~~~~~~~~------------------------------------------------------ 155 (288)
T cd07833 130 NILVSESGVLKLCDFGFARALRARPA------------------------------------------------------ 155 (288)
T ss_pred HeEECCCCCEEEEeeecccccCCCcc------------------------------------------------------
Confidence 99999999999999999854422100
Q ss_pred ccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc---
Q 002736 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~--- 267 (886)
.......++.+|+|||.+.+. .++.++|||||||++|+|++
T Consensus 156 -----------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 200 (288)
T cd07833 156 -----------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP 200 (288)
T ss_pred -----------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 000113678899999999888 78999999999999999999
Q ss_pred CCCCCchhhHHhHhhc--cC------------------CCCh---------hhh-ccChhhHHHHHHccCCCCCCCCCHH
Q 002736 268 PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLL-LKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~------------------~~~~---------~~~-~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
||.............. .. .+++ ... ..++++.+|+.+||..+|.+||+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 280 (288)
T cd07833 201 LFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD 280 (288)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHH
Confidence 5543322221111000 00 0000 001 1256788999999999999999999
Q ss_pred HHhcCCCC
Q 002736 318 ELLQSEFL 325 (886)
Q Consensus 318 eil~h~~~ 325 (886)
++++||||
T Consensus 281 ~il~~~~f 288 (288)
T cd07833 281 ELLQHPYF 288 (288)
T ss_pred HHhcCCCC
Confidence 99999997
No 426
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93 E-value=1.5e-25 Score=241.77 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=150.8
Q ss_pred eeecccc-cccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+.... |++++..++ ++.+ .+.++++|||.+++|.+++.... ..+++..++.++.||+.+|.|||++||+|+|
T Consensus 49 ~~l~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~d 124 (283)
T cd07830 49 KSLRKLNEHPNIVKLKE-VFRE---NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRD 124 (283)
T ss_pred HHHHhccCCCCchhHHH-Hhhc---CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 3444455 888888776 4443 57889999998999999886543 4789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|+|+||+++.++.++++|||++.......
T Consensus 125 l~~~ni~i~~~~~~~l~d~~~~~~~~~~~--------------------------------------------------- 153 (283)
T cd07830 125 LKPENLLVSGPEVVKIADFGLAREIRSRP--------------------------------------------------- 153 (283)
T ss_pred CChhhEEEcCCCCEEEeecccceeccCCC---------------------------------------------------
Confidence 99999999999999999999885331110
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHh
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl 266 (886)
......++..|+|||.+.+ ..++.++|||||||++|||+
T Consensus 154 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~ 193 (283)
T cd07830 154 ----------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELY 193 (283)
T ss_pred ----------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHH
Confidence 0011257888999998855 44899999999999999999
Q ss_pred c---CCCCCchhhHHhHhhc--cC------------------CC--------ChhhhccChhhHHHHHHccCCCCCCCCC
Q 002736 267 C---PFSTGEEKTRTMSSLR--HR------------------VL--------PPQLLLKFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~--~~------------------~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rps 315 (886)
+ ||.............. .. .. ........+.+.+|+.+||..+|.+||+
T Consensus 194 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 273 (283)
T cd07830 194 TLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT 273 (283)
T ss_pred hCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC
Confidence 9 5543332222111110 00 00 0011123467889999999999999999
Q ss_pred HHHHhcCCCC
Q 002736 316 MGELLQSEFL 325 (886)
Q Consensus 316 ~~eil~h~~~ 325 (886)
+.|++.||||
T Consensus 274 ~~ei~~~~~~ 283 (283)
T cd07830 274 ASQALQHPYF 283 (283)
T ss_pred HHHHhhCCCC
Confidence 9999999997
No 427
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=1.7e-25 Score=237.30 Aligned_cols=204 Identities=22% Similarity=0.218 Sum_probs=157.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ .+.+.. .+.+++++|+ .+++|.+++.+.. .+++.++..++.|++.||.|||+.|++|+||+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~ 128 (260)
T cd06606 52 ILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIK 128 (260)
T ss_pred HHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 444556888888666 333221 3678899999 5999999996553 78999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++|+|||.+.........
T Consensus 129 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--------------------------------------------------- 157 (260)
T cd06606 129 GANILVDSDGVVKLADFGCAKRLGDIETG--------------------------------------------------- 157 (260)
T ss_pred HHHEEEcCCCCEEEcccccEEeccccccc---------------------------------------------------
Confidence 99999999999999999988544221100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 158 -------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~ 200 (260)
T cd06606 158 -------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200 (260)
T ss_pred -------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 00011256788999999988889999999999999999999
Q ss_pred -CCCCCchhhHHhHhhcc-CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 -PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||.........+..+.. ...+..+...+..+.+|+.+||..+|.+||++.++++||||
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 201 PPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 77555433333333332 22333334456788899999999999999999999999997
No 428
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93 E-value=1.2e-25 Score=249.07 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=154.5
Q ss_pred ceeeccc-ccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 29 GVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 29 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
...+.+. +|++++..++ ++.. .....++++|||.+++|.+++.+. .+++..++.++.||+.||.|||+.||+|||
T Consensus 57 ~~~l~~l~~h~ni~~~~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~d 132 (337)
T cd07852 57 IMFLQELGDHPNIVKLLN-VIKA-ENDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRD 132 (337)
T ss_pred HHHHHHhcCCCCccceee-eecc-CCCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 3344555 8999988776 4432 223467899999888999999653 678999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|||+||+++.++.+|++|||++..........
T Consensus 133 l~p~nill~~~~~~kl~d~g~~~~~~~~~~~~------------------------------------------------ 164 (337)
T cd07852 133 LKPSNILLNSDCRVKLADFGLARSLSELEENP------------------------------------------------ 164 (337)
T ss_pred CCHHHEEEcCCCcEEEeeccchhccccccccc------------------------------------------------
Confidence 99999999999999999999985442110000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHh
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl 266 (886)
.........|+++|+|||.+.+ ..++.++|||||||++|||+
T Consensus 165 -------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~ 207 (337)
T cd07852 165 -------------------------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML 207 (337)
T ss_pred -------------------------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHH
Confidence 0001122468999999998865 44889999999999999999
Q ss_pred c---CCCCCchhhHHhHh--------------------------hccCC---CChhhhccChhhHHHHHHccCCCCCCCC
Q 002736 267 C---PFSTGEEKTRTMSS--------------------------LRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (886)
Q Consensus 267 ~---pf~~~~~~~~~~~~--------------------------~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (886)
+ ||............ +.... ........+..+.++|.+||+.+|.+||
T Consensus 208 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp 287 (337)
T cd07852 208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL 287 (337)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccccc
Confidence 9 56433221111100 00000 0111122456778999999999999999
Q ss_pred CHHHHhcCCCCCCCc
Q 002736 315 KMGELLQSEFLNEPR 329 (886)
Q Consensus 315 s~~eil~h~~~~~~~ 329 (886)
|+.++++|||+....
T Consensus 288 s~~~il~~~~~~~~~ 302 (337)
T cd07852 288 TAEEALEHPYVAQFH 302 (337)
T ss_pred CHHHHhhChhhhhhc
Confidence 999999999997653
No 429
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93 E-value=1.6e-25 Score=241.71 Aligned_cols=200 Identities=18% Similarity=0.108 Sum_probs=146.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++.+++ +|.. .....++++||| .+++|.+++.+ ..+++.+++.++.||+.||+|||++||+|||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlk 134 (283)
T cd05080 59 ILKTLYHENIVKYKG-CCSE-QGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLA 134 (283)
T ss_pred HHHhCCCCCEeeEEE-EEec-CCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence 455668888888776 4433 234567889998 88999999965 358999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+|||++.++.++++|||+++..........
T Consensus 135 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------- 165 (283)
T cd05080 135 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR------------------------------------------------- 165 (283)
T ss_pred hheEEEcCCCcEEEeecccccccCCcchhhc-------------------------------------------------
Confidence 9999999999999999999864421100000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 --------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~ 207 (283)
T cd05080 166 --------------------------------------VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC 207 (283)
T ss_pred --------------------------------------cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence 0000134566999999988889999999999999999998
Q ss_pred -CCCCCchhhHHhH--------------hhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 -PFSTGEEKTRTMS--------------SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 -pf~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.........+. .+.....++.....++.+.+++.+||.++|++||++.++++
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 208 DSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred CCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 5533221111100 01111112222344577889999999999999999999986
No 430
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.92 E-value=1.9e-25 Score=239.02 Aligned_cols=199 Identities=13% Similarity=0.163 Sum_probs=152.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. ..+.++++||| .+++|.+++.+....+++.++..++.|++.||+|||++||+|||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlk 134 (268)
T cd05063 59 IMGQFSHHNIIRLEG-VVT---KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLA 134 (268)
T ss_pred HHhcCCCCCeeEEEE-EEc---cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 445567888877666 443 34678899998 7889999997665678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++.......... .
T Consensus 135 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~---------------------------------------------~---- 165 (268)
T cd05063 135 ARNILVNSNLECKVSDFGLSRVLEDDPEGT---------------------------------------------Y---- 165 (268)
T ss_pred hhhEEEcCCCcEEECCCccceecccccccc---------------------------------------------e----
Confidence 999999999999999999985432110000 0
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g 207 (268)
T cd05063 166 --------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFG 207 (268)
T ss_pred --------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCC
Confidence 0000122456999999988889999999999999999886
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ...+..+......+.....++.+.+++.+||..+|.+||++.++++
T Consensus 208 ~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 208 ERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6654433 3344444444344444456778889999999999999999999976
No 431
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.92 E-value=4.1e-26 Score=242.80 Aligned_cols=199 Identities=23% Similarity=0.275 Sum_probs=149.3
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeecc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrD 107 (886)
..+...+|+|++.+++ +|. ..+.++++||| .+++|.++|... ...++...+..|+.||+.||.|||+++|+|+|
T Consensus 53 ~~l~~l~h~ni~~~~g-~~~---~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~ 128 (259)
T PF07714_consen 53 QILRKLRHPNIVKLYG-FCI---ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGN 128 (259)
T ss_dssp HHHHTHSBTTBE-EEE-EEE---SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred cccccccccccccccc-ccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444569999998776 666 34558888999 678999999665 56789999999999999999999999999999
Q ss_pred cCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccc
Q 002736 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (886)
Q Consensus 108 lkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 187 (886)
|+|+||+++.++.+||+|||++..........
T Consensus 129 l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~------------------------------------------------ 160 (259)
T PF07714_consen 129 LSPSNILLDSNGQVKLSDFGLSRPISEKSKYK------------------------------------------------ 160 (259)
T ss_dssp -SGGGEEEETTTEEEEESTTTGEETTTSSSEE------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccc------------------------------------------------
Confidence 99999999999999999999985431110000
Q ss_pred ccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc
Q 002736 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (886)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~ 267 (886)
......+...|+|||.+.+..++.++||||||+++|||++
T Consensus 161 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~ 200 (259)
T PF07714_consen 161 ----------------------------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILT 200 (259)
T ss_dssp ----------------------------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHT
T ss_pred ----------------------------------------cccccccccccccccccccccccccccccccccccccccc
Confidence 0000134667999999988889999999999999999998
Q ss_pred ----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||... ........+.....++.....+..+.+++..||..+|.+||++.++++
T Consensus 201 ~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 201 LGKFPFSDY-DNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp TSSGTTTTS-CHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccc-ccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 66444 334444444444444445556778889999999999999999999975
No 432
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92 E-value=1.9e-25 Score=243.41 Aligned_cols=205 Identities=18% Similarity=0.224 Sum_probs=151.9
Q ss_pred eeecccccccCCCCCCccccccc-------cCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (886)
..+...+|++++..++ ++.++. ....+++++||.+++|..++......+++.+++.++.||+.||.|||+.|
T Consensus 58 ~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 136 (302)
T cd07864 58 KILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN 136 (302)
T ss_pred HHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445567888888766 554432 23478999999777898888665567899999999999999999999999
Q ss_pred eeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 103 iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|+|+||||+||+++..+.+|++|||++.........
T Consensus 137 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 172 (302)
T cd07864 137 FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-------------------------------------------- 172 (302)
T ss_pred eecCCCCHHHEEECCCCcEEeCcccccccccCCccc--------------------------------------------
Confidence 999999999999999999999999998543211000
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvi 261 (886)
......++..|+|||.+.+. .++.++|||||||+
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~ 207 (302)
T cd07864 173 ---------------------------------------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 207 (302)
T ss_pred ---------------------------------------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence 00001446779999988654 47899999999999
Q ss_pred HHHHhc---CCCCCchhhHHhHhhcc---CCCC--------------------------hhhhccChhhHHHHHHccCCC
Q 002736 262 LFELFC---PFSTGEEKTRTMSSLRH---RVLP--------------------------PQLLLKFPKEASFCLWLLHPE 309 (886)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~---~~~~--------------------------~~~~~~~~~~~~li~~~L~~d 309 (886)
+|||++ ||...+... .+..+.. ...+ ..+...++.+.+++.+||..+
T Consensus 208 ~~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 286 (302)
T cd07864 208 LGELFTKKPIFQANQELA-QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLD 286 (302)
T ss_pred HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCC
Confidence 999999 554433222 1111111 1000 011224567889999999999
Q ss_pred CCCCCCHHHHhcCCCC
Q 002736 310 PSGRPKMGELLQSEFL 325 (886)
Q Consensus 310 P~~Rps~~eil~h~~~ 325 (886)
|.+||++.+++.||||
T Consensus 287 P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 287 PSKRCTAEEALNSPWL 302 (302)
T ss_pred hhhCCCHHHHhcCCCC
Confidence 9999999999999997
No 433
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.92 E-value=1.9e-25 Score=242.76 Aligned_cols=198 Identities=16% Similarity=0.150 Sum_probs=146.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC----------CCcChHHHHHHHHHHHHHHHhhc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.+....|++++..++ +|.+ .+.++++||+ .+++|.++|.+.. ..+++..++.++.||+.||.|||
T Consensus 72 ~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH 147 (296)
T cd05051 72 ILSRLSDPNIARLLG-VCTV---DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE 147 (296)
T ss_pred HHHhcCCCCEeEEEE-EEec---CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344456788877665 4443 3678899998 7899999995432 26899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+||+++.++.++++|||++.........
T Consensus 148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------- 186 (296)
T cd05051 148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY----------------------------------------- 186 (296)
T ss_pred HcCccccccchhceeecCCCceEEccccceeecccCcce-----------------------------------------
Confidence 999999999999999999999999999998543211000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
.......++..|+|||.+.+..++.++||||||
T Consensus 187 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 219 (296)
T cd05051 187 -----------------------------------------------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFG 219 (296)
T ss_pred -----------------------------------------------eecCcCCCCceecCHHHhhcCCCCccchhhhhH
Confidence 000112456789999999888899999999999
Q ss_pred HHHHHHhc-----CCCCCchhhHHhHhhcc-------CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC-----PFSTGEEKTRTMSSLRH-------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~-----pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||........ ...... ....+.....+.++.+++.+||..||.+||++.|+++
T Consensus 220 ~~l~el~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 220 VTLWEILTLCREQPYEHLTDQQV-IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHhcCCCCCCCCcChHHH-HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 99999986 5543332222 222211 1112222334567889999999999999999999975
No 434
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.92 E-value=3e-25 Score=237.60 Aligned_cols=201 Identities=14% Similarity=0.174 Sum_probs=150.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|+|++.+++ .+. ....++++||| .+++|.+++......+++.+++.++.||+.||.|||++||+|+|||
T Consensus 58 ~l~~l~h~ni~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~ 133 (269)
T cd05065 58 IMGQFDHPNIIHLEG-VVT---KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLA 133 (269)
T ss_pred HHHhCCCcCcceEEE-EEC---CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 344567888888766 332 34678899998 7889999997655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.+|++|||++............
T Consensus 134 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~------------------------------------------------ 165 (269)
T cd05065 134 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY------------------------------------------------ 165 (269)
T ss_pred hheEEEcCCCcEEECCCccccccccCcccccc------------------------------------------------
Confidence 99999999999999999988543211000000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
. .......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 --------------------------------~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g 208 (269)
T cd05065 166 --------------------------------T-----SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 208 (269)
T ss_pred --------------------------------c-----cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCC
Confidence 0 0000012456999999988889999999999999999875
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||...... .....+......+.+...++.+.+++.+||..+|.+||++.+++.
T Consensus 209 ~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 209 ERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66544333 233333333333334456678889999999999999999999875
No 435
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.92 E-value=2.4e-24 Score=213.62 Aligned_cols=219 Identities=18% Similarity=0.273 Sum_probs=187.5
Q ss_pred ceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCc------------------eEEEEecccCCcEEEEEEccC
Q 002736 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS------------------QVLTEMREHERRVWSIDFSSA 671 (886)
Q Consensus 610 ~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~------------------~~~~~~~~h~~~v~~v~~~p~ 671 (886)
..+...|++++.+-+|++ ++.++|+|+.|..|+|.|++.. -.++++-.|...|+++.|+|
T Consensus 105 t~ylt~HK~~cR~aafs~-DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP- 182 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSP-DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP- 182 (430)
T ss_pred eEEEeecccceeeeeeCC-CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc-
Confidence 445567999999999999 7999999999999999998721 24678888999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEE--E
Q 002736 672 DPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT--L 749 (886)
Q Consensus 672 ~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~--~ 749 (886)
....|++|+.|++|+++|+..... ......+....+|.++.|+|. |.+|++|..-.++++||+.+.+.-+.. -
T Consensus 183 re~ILiS~srD~tvKlFDfsK~sa----KrA~K~~qd~~~vrsiSfHPs-GefllvgTdHp~~rlYdv~T~QcfvsanPd 257 (430)
T KOG0640|consen 183 RETILISGSRDNTVKLFDFSKTSA----KRAFKVFQDTEPVRSISFHPS-GEFLLVGTDHPTLRLYDVNTYQCFVSANPD 257 (430)
T ss_pred hhheEEeccCCCeEEEEecccHHH----HHHHHHhhccceeeeEeecCC-CceEEEecCCCceeEEeccceeEeeecCcc
Confidence 888999999999999999987654 344455666788999999999 999999999999999999987742221 2
Q ss_pred ecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEee-cCC-CceeEEEEecCCCEEEEEcCCCcEEE
Q 002736 750 IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-GHT-NVKNFVGLSVWDGYVATGSETNEVFV 826 (886)
Q Consensus 750 ~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~-~h~-~~v~~v~~sp~g~~lasgs~Dg~v~i 826 (886)
.+|..+|++|.|+ .+.+.+|||.||.|+|||--+++ ++.++. .|. ..|.+..|..+|+||.+.+.|..|++
T Consensus 258 ~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r------Cv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkL 331 (430)
T KOG0640|consen 258 DQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR------CVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKL 331 (430)
T ss_pred cccccceeEEEecCCccEEEEeccCCcEEeeccccHH------HHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeee
Confidence 4799999999997 89999999999999999988774 477664 564 46888999999999999999999999
Q ss_pred EecCCCCcceeeccC
Q 002736 827 YHKAFPMPALSFNFN 841 (886)
Q Consensus 827 wd~~~~~~~~~~~~~ 841 (886)
|.+.++.++..+.-.
T Consensus 332 WEi~t~R~l~~YtGA 346 (430)
T KOG0640|consen 332 WEISTGRMLKEYTGA 346 (430)
T ss_pred eeecCCceEEEEecC
Confidence 999999999887643
No 436
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.92 E-value=2.5e-25 Score=246.11 Aligned_cols=193 Identities=17% Similarity=0.182 Sum_probs=147.0
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
+|++++..++ +|.. .+.++++||| .+++|.++|.+. ...++..+++.++.||+.||.|||
T Consensus 76 ~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 151 (334)
T cd05100 76 KHKNIINLLG-ACTQ---DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA 151 (334)
T ss_pred CCCCeeeeeE-EEcc---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6888887666 5543 4568888998 788999999542 234788899999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+|||++.++.+||+|||+++.........
T Consensus 152 ~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~---------------------------------------- 191 (334)
T cd05100 152 SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK---------------------------------------- 191 (334)
T ss_pred HCCeeccccccceEEEcCCCcEEECCcccceecccccccc----------------------------------------
Confidence 9999999999999999999999999999985432110000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 223 (334)
T cd05100 192 ------------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 223 (334)
T ss_pred ------------------------------------------------cccCCCcCceEcCHHHhccCCcCchhhhHHHH
Confidence 00001335679999999988899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|+||||++ ||... ........+.....++........+.+++.+||+.+|.+||++.|+++
T Consensus 224 ~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 224 VLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred HHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999986 55433 333344444443333444455678889999999999999999999876
No 437
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.92 E-value=1.5e-25 Score=242.27 Aligned_cols=199 Identities=20% Similarity=0.274 Sum_probs=147.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+.+.+|++++..++ ++. ..+.++++||| .+++|.+++... ..+++.+++.++.||+.||.|||++||+|+||+
T Consensus 53 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~ 127 (286)
T cd07846 53 MLKQLRHENLVNLIE-VFR---RKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIK 127 (286)
T ss_pred HHHhcCCcchhhHHH-hcc---cCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 455567888877666 443 35678999999 666777766443 458999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||++........
T Consensus 128 p~ni~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 155 (286)
T cd07846 128 PENILVSQSGVVKLCDFGFARTLAAPGE---------------------------------------------------- 155 (286)
T ss_pred HHHEEECCCCcEEEEeeeeeeeccCCcc----------------------------------------------------
Confidence 9999999999999999998853311100
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc-
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~- 267 (886)
......++.+|+|||.+.+. .++.++|||||||++|||++
T Consensus 156 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g 197 (286)
T cd07846 156 --------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG 197 (286)
T ss_pred --------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcC
Confidence 00112678899999998764 47889999999999999999
Q ss_pred --CCCCCchhhHHhHhhcc---C------------------CCC---------hhhhccChhhHHHHHHccCCCCCCCCC
Q 002736 268 --PFSTGEEKTRTMSSLRH---R------------------VLP---------PQLLLKFPKEASFCLWLLHPEPSGRPK 315 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---~------------------~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps 315 (886)
||...... .....+.. . ..+ .........+.+|+.+||..+|.+||+
T Consensus 198 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~ 276 (286)
T cd07846 198 EPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS 276 (286)
T ss_pred CCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh
Confidence 44332221 11111000 0 000 011234566889999999999999999
Q ss_pred HHHHhcCCCC
Q 002736 316 MGELLQSEFL 325 (886)
Q Consensus 316 ~~eil~h~~~ 325 (886)
+.++++||||
T Consensus 277 ~~~il~~~~~ 286 (286)
T cd07846 277 SSQLLHHEFF 286 (286)
T ss_pred HHHHhcCCCC
Confidence 9999999997
No 438
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.92 E-value=2.6e-25 Score=236.84 Aligned_cols=196 Identities=13% Similarity=0.119 Sum_probs=149.0
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+....|++++..++ ++. .+.++++||| .+++|.+++.+. ...+++..+..++.||+.||.|||+.||+|+||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl 128 (260)
T cd05069 54 IMKKLRHDKLVPLYA-VVS----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDL 128 (260)
T ss_pred HHHhCCCCCeeeEEE-EEc----CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeeccc
Confidence 445567888877665 332 3457889999 678999999653 345789999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++.........
T Consensus 129 ~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------- 158 (260)
T cd05069 129 RAANILVGDNLVCKIADFGLARLIEDNEYT-------------------------------------------------- 158 (260)
T ss_pred CcceEEEcCCCeEEECCCccceEccCCccc--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~ 199 (260)
T cd05069 159 ---------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK 199 (260)
T ss_pred ---------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhC
Confidence 0000134567999999988889999999999999999996
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+.....++.....+..+.+++.+||.++|.+||++.++++
T Consensus 200 g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 200 GRVPYPGMV-NREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred CCCCCCCCC-HHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 664433 33333444444333444455677889999999999999999999875
No 439
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.3e-26 Score=250.44 Aligned_cols=200 Identities=18% Similarity=0.190 Sum_probs=159.5
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
+..+....+|+|++.+|| ++.+ ..+++|+||+ .||+|.++|++....++..+...++.+.+.||+|||++++|||
T Consensus 211 EArvMr~l~H~NVVr~yG-Va~~---~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHR 286 (474)
T KOG0194|consen 211 EARVMRQLNHPNVVRFYG-VAVL---EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHR 286 (474)
T ss_pred HHHHHHhCCCCCEEEEEE-EEcC---CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcch
Confidence 334445589999999998 7764 4689999999 8999999998877789999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||-..|+|++.++.+||+|||+++...........
T Consensus 287 DIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~--------------------------------------------- 321 (474)
T KOG0194|consen 287 DIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFL--------------------------------------------- 321 (474)
T ss_pred hHhHHHheecCCCeEEeCccccccCCcceeecccc---------------------------------------------
Confidence 99999999999999999999998533100000000
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
.--...|+|||.+....|++++|||||||++||++
T Consensus 322 ---------------------------------------------~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif 356 (474)
T KOG0194|consen 322 ---------------------------------------------KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIF 356 (474)
T ss_pred ---------------------------------------------ccCcceecChhhhccCccccccchhheeeeEEeee
Confidence 00123489999999999999999999999999999
Q ss_pred c----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+ ||.+..........+......+.+...+.....++..|+..+|++||++.++.+
T Consensus 357 ~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 357 ENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 8 776665554444444555555555555667779999999999999999998866
No 440
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.92 E-value=3e-25 Score=246.32 Aligned_cols=196 Identities=19% Similarity=0.236 Sum_probs=145.9
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC--------------------------------------
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------------------- 76 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-------------------------------------- 76 (886)
+|++++..++ +|.. ....++++||| .+++|.++|....
T Consensus 69 ~h~niv~~~~-~~~~--~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (343)
T cd05103 69 HHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQ 145 (343)
T ss_pred CCccHhhhcc-eeec--CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccc
Confidence 5677777776 5543 23567889999 8899999985321
Q ss_pred ----------------------------CCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCc
Q 002736 77 ----------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESAS 128 (886)
Q Consensus 77 ----------------------------~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~ 128 (886)
..++...+..++.||+.||.|||++||+||||||+|||++.++.+|++|||+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~ 225 (343)
T cd05103 146 SSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGL 225 (343)
T ss_pred ccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccc
Confidence 2367788899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccc
Q 002736 129 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 208 (886)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (886)
+.........
T Consensus 226 ~~~~~~~~~~---------------------------------------------------------------------- 235 (343)
T cd05103 226 ARDIYKDPDY---------------------------------------------------------------------- 235 (343)
T ss_pred ccccccCcch----------------------------------------------------------------------
Confidence 8543211000
Q ss_pred cccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhcc
Q 002736 209 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH 284 (886)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~ 284 (886)
.......++..|+|||.+.+..++.++|||||||++|||++ ||............+..
T Consensus 236 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 297 (343)
T cd05103 236 ------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 297 (343)
T ss_pred ------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc
Confidence 00000134567999999988889999999999999999986 66443333333333333
Q ss_pred CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcC
Q 002736 285 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (886)
Q Consensus 285 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 322 (886)
...++.+....+.+.+++..||+.+|.+||++.|+++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 298 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred cCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33333333345778899999999999999999999874
No 441
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.92 E-value=1.4e-25 Score=238.92 Aligned_cols=200 Identities=20% Similarity=0.229 Sum_probs=153.9
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
..+.+.+|++++..++ .+. ....++++||| .+++|.+++.+ ....+++.+++.++.||+.||.|||++||+|
T Consensus 54 ~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h 129 (260)
T cd08222 54 QLLSKLDHPAIVKFHA-SFL---ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILH 129 (260)
T ss_pred HHHHhCCCCcHHHHHH-HHh---cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 3455678999988777 333 23568889999 78899988842 3457899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
+||||+||+++. +.++++|||++........
T Consensus 130 ~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~------------------------------------------------ 160 (260)
T cd08222 130 RDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD------------------------------------------------ 160 (260)
T ss_pred cCCChhheEeec-CCEeecccCceeecCCCcc------------------------------------------------
Confidence 999999999974 6799999998854311100
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......|++.|+|||.+.+..++.++|+||||+++|+|
T Consensus 161 ------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l 198 (260)
T cd08222 161 ------------------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198 (260)
T ss_pred ------------------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00012567889999999888889999999999999999
Q ss_pred hc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
++ ||..... ......+.....+......++.+.+++.+||..+|.+||++.++++||||
T Consensus 199 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 199 CCLAHAFEGQNF-LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HhCCCCCCCccH-HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99 6644333 33333333333333334456788899999999999999999999999997
No 442
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.92 E-value=2.5e-24 Score=225.54 Aligned_cols=292 Identities=12% Similarity=0.208 Sum_probs=235.9
Q ss_pred EeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEec
Q 002736 558 DLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (886)
Q Consensus 558 ~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s 637 (886)
.+++-..+.|...|+++.++...+++.|||. |.|||||+....+.....+ +-......-|.++...| ++..|++|+
T Consensus 409 harq~~tL~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~Pvsq--Ldcl~rdnyiRSckL~p-dgrtLivGG 484 (705)
T KOG0639|consen 409 HARQINTLAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQ--LDCLNRDNYIRSCKLLP-DGRTLIVGG 484 (705)
T ss_pred hHHhhhhhccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCcccc--ccccCcccceeeeEecC-CCceEEecc
Confidence 3344455789999999999999999999997 8999999987533221111 11122345578888888 799999999
Q ss_pred CCCcEEEEECCCce--EEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeec-CCCeEE
Q 002736 638 FEGVVQVWDVSRSQ--VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKT-KANVCC 714 (886)
Q Consensus 638 ~Dg~V~iWd~~t~~--~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~-~~~v~~ 714 (886)
+-.+|.|||+.+.. ...++....-....++.+| |.++.++|+.||.|.|||+.+ ...+..+.+ ...+.|
T Consensus 485 eastlsiWDLAapTprikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwDLhn-------q~~VrqfqGhtDGasc 556 (705)
T KOG0639|consen 485 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWDLHN-------QTLVRQFQGHTDGASC 556 (705)
T ss_pred ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEEccc-------ceeeecccCCCCCcee
Confidence 99999999997654 3344444445677889998 899999999999999999998 666667664 567999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCc
Q 002736 715 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPL 793 (886)
Q Consensus 715 v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~ 793 (886)
|..+++ |..|.+|+-|++|++||+|.++++... .....|.++.++ ++++|+.|-.++.+.|-.+.... .
T Consensus 557 Idis~d-GtklWTGGlDntvRcWDlregrqlqqh--dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-------k 626 (705)
T KOG0639|consen 557 IDISKD-GTKLWTGGLDNTVRCWDLREGRQLQQH--DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-------K 626 (705)
T ss_pred EEecCC-CceeecCCCccceeehhhhhhhhhhhh--hhhhhheecccCCCccceeeecccCcEEEEecCCcc-------c
Confidence 999999 899999999999999999998753221 234678888886 99999999999999998887653 4
Q ss_pred eEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEE
Q 002736 794 HSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVA 873 (886)
Q Consensus 794 ~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s 873 (886)
..+.-|.+.|.++.|++.|+++++.+.|+.+..|.+..+..++..+ ....|.++..+.|.. ++||
T Consensus 627 yqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk--------------E~SsVlsCDIS~ddk-yIVT 691 (705)
T KOG0639|consen 627 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--------------ESSSVLSCDISFDDK-YIVT 691 (705)
T ss_pred eeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeecc--------------ccCcceeeeeccCce-EEEe
Confidence 6677799999999999999999999999999999999888776543 134599999999999 9999
Q ss_pred EeCCCCEEEEEeC
Q 002736 874 ANSSGNIKILEMV 886 (886)
Q Consensus 874 ~~~dg~I~iw~l~ 886 (886)
|+.|....||+++
T Consensus 692 GSGdkkATVYeV~ 704 (705)
T KOG0639|consen 692 GSGDKKATVYEVI 704 (705)
T ss_pred cCCCcceEEEEEe
Confidence 9999999999874
No 443
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=2.9e-25 Score=235.14 Aligned_cols=198 Identities=19% Similarity=0.258 Sum_probs=154.8
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+.+..|++++..+. ++.+ ...++++||+ .+++|.+++... ..+++..+..++.||+.||.|||++||+||||||
T Consensus 53 l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p 127 (254)
T cd06627 53 LKNLKHPNIVKYIG-SIET---SDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKA 127 (254)
T ss_pred HHhCCCCCccEEEE-EEEe---CCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCH
Confidence 34456777776555 3332 3668899998 788999999654 6789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++........
T Consensus 128 ~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------------- 154 (254)
T cd06627 128 ANILTTKDGVVKLADFGVATKLNDVSK----------------------------------------------------- 154 (254)
T ss_pred HHEEECCCCCEEEeccccceecCCCcc-----------------------------------------------------
Confidence 999999999999999999854422100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
......++..|+|||.+.+..++.++||||||+++|+|++
T Consensus 155 -------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~ 197 (254)
T cd06627 155 -------------------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNP 197 (254)
T ss_pred -------------------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCC
Confidence 0001256888999999988778999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
||...... ..+........++......+.+.+++.+||..+|++||++.+++.||||
T Consensus 198 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 198 PYYDLNPM-AALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCCCccHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 66544432 3333333333444444556788899999999999999999999999997
No 444
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.92 E-value=2.7e-25 Score=237.91 Aligned_cols=198 Identities=14% Similarity=0.153 Sum_probs=142.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC----CCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~----~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
.+...+|+|++.+++ .|. ..+.++++||| .+++|.++|.+.. ...++..++.++.||+.||.|||++||+|
T Consensus 48 ~~~~l~h~nii~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 123 (269)
T cd05042 48 PYRELNHPNVLQCLG-QCI---ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIH 123 (269)
T ss_pred HHHhCCCCCcceEEE-EEC---CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEec
Confidence 344568999988776 443 35678999999 7889999996532 23467788999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
|||||+|||++.++.+|++|||++..........
T Consensus 124 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~---------------------------------------------- 157 (269)
T cd05042 124 SDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI---------------------------------------------- 157 (269)
T ss_pred ccccHhheEecCCCcEEEeccccccccccchhee----------------------------------------------
Confidence 9999999999999999999999884321110000
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-------CCCCcccccchH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRL 258 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDIwSl 258 (886)
......++..|+|||++.. ..++.++|||||
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 195 (269)
T cd05042 158 ------------------------------------------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSL 195 (269)
T ss_pred ------------------------------------------ccCCCCCcccccCHHHHhhccccccccccchhhHHHHH
Confidence 0000145677999998743 347889999999
Q ss_pred HHHHHHHhc----CCCCCchhhHHhHhhccCCC---Chh-hhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVL---PPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 259 Gvil~eLl~----pf~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||++|||++ ||............+..... .+. .....+....++..|+ .||.+||+++++++
T Consensus 196 G~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 196 GVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 999999997 55444433333333332211 111 2234455668888888 59999999999875
No 445
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.92 E-value=2e-25 Score=236.98 Aligned_cols=204 Identities=20% Similarity=0.262 Sum_probs=154.2
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCC-cChHHHHHHHHHHHHHHHhhc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~lH 99 (886)
.++.|...+ ...+|++++.++. .+.+ .+.++++||+ .|++|.+++...... +++..+..++.||+.||.|||
T Consensus 47 ~~~~e~~~l--~~l~~~~i~~~~~-~~~~---~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh 120 (258)
T smart00219 47 EFLREARIM--RKLDHPNIVKLLG-VCTE---EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120 (258)
T ss_pred HHHHHHHHH--HhcCCCchheEEE-EEcC---CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh
Confidence 444554433 3347888888776 4433 2578888888 789999999654333 899999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+|+||||+||+++.++.++++|||++.........
T Consensus 121 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------- 159 (258)
T smart00219 121 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY----------------------------------------- 159 (258)
T ss_pred cCCeeecccccceEEEccCCeEEEcccCCceeccccccc-----------------------------------------
Confidence 999999999999999999999999999998544221000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......+++.|+|||.+.+..++.++||||||
T Consensus 160 ------------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG 191 (258)
T smart00219 160 ------------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFG 191 (258)
T ss_pred ------------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHH
Confidence 00001246779999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||.. .........+.....++.....+..+.+++.+||..+|.+|||+.|+++
T Consensus 192 ~i~~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 192 VLLWEIFTLGESPYPG-MSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHhCCCCCCCC-CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 99999997 4433 3334444444444444444456778889999999999999999999986
No 446
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.92 E-value=3.1e-25 Score=239.03 Aligned_cols=201 Identities=20% Similarity=0.268 Sum_probs=150.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++++...+ ++.+ .+.++++||+.+++|.+++.+....+++..++.++.||+.||.|||++||+|+||+|
T Consensus 51 ~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~ 126 (282)
T cd07829 51 LLKELKHPNIVKLLD-VIHT---ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKP 126 (282)
T ss_pred HHHhcCCCCHHHHHh-hhhc---CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCh
Confidence 344456888877666 4433 377899999977899999976545789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++........
T Consensus 127 ~ni~~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 153 (282)
T cd07829 127 QNILINRDGVLKLADFGLARAFGIPLR----------------------------------------------------- 153 (282)
T ss_pred heEEEcCCCCEEEecCCcccccCCCcc-----------------------------------------------------
Confidence 999999999999999999854321100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-CCCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++.+|+|||.+.+. .++.++|||||||++|||++
T Consensus 154 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~ 196 (282)
T cd07829 154 -------------------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196 (282)
T ss_pred -------------------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCC
Confidence 00011457789999998776 68999999999999999999
Q ss_pred -CCCCCchhhHHhHhhc-------------------cCCCC--------hhhhccChhhHHHHHHccCCCCCCCCCHHHH
Q 002736 268 -PFSTGEEKTRTMSSLR-------------------HRVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 319 (886)
||.............. ...++ .........+.+++.+||..+|.+||++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~ 276 (282)
T cd07829 197 PLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEA 276 (282)
T ss_pred CCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHH
Confidence 5543332211111000 00000 1111234568899999999999999999999
Q ss_pred hcCCCC
Q 002736 320 LQSEFL 325 (886)
Q Consensus 320 l~h~~~ 325 (886)
+.||||
T Consensus 277 l~~p~~ 282 (282)
T cd07829 277 LKHPYF 282 (282)
T ss_pred hhCcCC
Confidence 999997
No 447
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.92 E-value=3.5e-25 Score=239.25 Aligned_cols=203 Identities=19% Similarity=0.224 Sum_probs=151.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+...+|++.+..++ ++.+. ..+..+++|||.+++|.+++.+....+++.+++.++.||+.||.|||++|++|+||||
T Consensus 51 ~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p 128 (287)
T cd07840 51 LLQKLRHPNIVRLKE-IVTSK-GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKG 128 (287)
T ss_pred HHHhccCCCeeehee-eEecC-CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcH
Confidence 334456888877666 44432 1367899999977899999966556789999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++.........
T Consensus 129 ~nil~~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------------- 156 (287)
T cd07840 129 SNILINNDGVLKLADFGLARPYTKRNSA---------------------------------------------------- 156 (287)
T ss_pred HHeEEcCCCCEEEccccceeeccCCCcc----------------------------------------------------
Confidence 9999999999999999998543211000
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~-- 267 (886)
..+...++.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~ 199 (287)
T cd07840 157 -------------------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199 (287)
T ss_pred -------------------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCC
Confidence 0011256788999998765 358999999999999999999
Q ss_pred -CCCCCchhhHHhHhhccC---C----------------------CC----hhhhc-cChhhHHHHHHccCCCCCCCCCH
Q 002736 268 -PFSTGEEKTRTMSSLRHR---V----------------------LP----PQLLL-KFPKEASFCLWLLHPEPSGRPKM 316 (886)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~---~----------------------~~----~~~~~-~~~~~~~li~~~L~~dP~~Rps~ 316 (886)
||........ ...+... . .+ ..... .++.+.+++.+||..+|.+||++
T Consensus 200 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 278 (287)
T cd07840 200 PIFQGSTELEQ-LEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA 278 (287)
T ss_pred CCCCCCChHHH-HHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH
Confidence 6654443221 1111100 0 00 01111 25677899999999999999999
Q ss_pred HHHhcCCCC
Q 002736 317 GELLQSEFL 325 (886)
Q Consensus 317 ~eil~h~~~ 325 (886)
.++++||||
T Consensus 279 ~~~l~~~~~ 287 (287)
T cd07840 279 DQALQHEYF 287 (287)
T ss_pred HHHhhCcCC
Confidence 999999997
No 448
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.92 E-value=2.6e-25 Score=236.17 Aligned_cols=197 Identities=15% Similarity=0.187 Sum_probs=148.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+...+|++++..++ ++. ....++++||| .+++|.+++......+++..++.++.||+.||.|||++||+|+|||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~ 127 (256)
T cd05112 52 VMMKLSHPKLVQLYG-VCT---ERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLA 127 (256)
T ss_pred HHHhCCCCCeeeEEE-EEc---cCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 344457888888766 333 34568889998 8899999996655678999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||.+.........
T Consensus 128 p~ni~i~~~~~~~l~d~g~~~~~~~~~~~--------------------------------------------------- 156 (256)
T cd05112 128 ARNCLVGENQVVKVSDFGMTRFVLDDQYT--------------------------------------------------- 156 (256)
T ss_pred cceEEEcCCCeEEECCCcceeecccCccc---------------------------------------------------
Confidence 99999999999999999988543211000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g 198 (256)
T cd05112 157 --------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEG 198 (256)
T ss_pred --------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCC
Confidence 0000133567999999988889999999999999999997
Q ss_pred --CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||..... ......+.....+......+..+.+|+.+||+.+|.+||++.++++
T Consensus 199 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 199 KTPYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred CCCCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 6644332 2333333332222222224567789999999999999999999987
No 449
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.92 E-value=2e-25 Score=241.61 Aligned_cols=199 Identities=16% Similarity=0.130 Sum_probs=150.2
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---------------------CCCcChHHHHHH
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVYECLHI 87 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---------------------~~~l~~~~~~~i 87 (886)
..+...+|++++..++ +|.+ .+.++++||| .+++|.+++... ...+++.+++.+
T Consensus 60 ~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 135 (288)
T cd05050 60 ALMAEFDHPNIVKLLG-VCAV---GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCI 135 (288)
T ss_pred HHHHhcCCCchheEEE-EEcC---CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHH
Confidence 3455568888888776 5543 4568899999 778999999532 124788899999
Q ss_pred HHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccc
Q 002736 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (886)
Q Consensus 88 ~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (886)
+.||+.||+|||++||+||||||+||+++.++.++++|||++..........
T Consensus 136 ~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------- 187 (288)
T cd05050 136 AKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK---------------------------- 187 (288)
T ss_pred HHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcccc----------------------------
Confidence 9999999999999999999999999999999999999999985432110000
Q ss_pred ccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC
Q 002736 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (886)
Q Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (886)
.......+..|+|||.+.+.
T Consensus 188 ------------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 207 (288)
T cd05050 188 ------------------------------------------------------------ASENDAIPIRWMPPESIFYN 207 (288)
T ss_pred ------------------------------------------------------------ccCCCccChhhcCHHHHhcC
Confidence 00001234569999999888
Q ss_pred CCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 248 ~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
.++.++|||||||++|||++ ||...... .....+.....++.....++.+.+|+.+||..+|.+||++.|+++
T Consensus 208 ~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 208 RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 89999999999999999986 66544333 333334433333333455678899999999999999999999875
No 450
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.92 E-value=3.2e-25 Score=240.23 Aligned_cols=199 Identities=16% Similarity=0.175 Sum_probs=150.1
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-----------------------CCCcChHHHH
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVDVYECL 85 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-----------------------~~~l~~~~~~ 85 (886)
..+...+|++++.+++ .|. ..+..+++||| .+++|.+++.+. ...+++..+.
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 130 (290)
T cd05045 55 NLLKQVNHPHVIKLYG-ACS---QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLI 130 (290)
T ss_pred HHHhhCCCCCEeeEEE-EEe---cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHH
Confidence 3445567888888776 443 34567888888 779999988431 1357889999
Q ss_pred HHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhc
Q 002736 86 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 165 (886)
Q Consensus 86 ~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (886)
.++.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 131 ~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------- 183 (290)
T cd05045 131 SFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY--------------------------- 183 (290)
T ss_pred HHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccch---------------------------
Confidence 99999999999999999999999999999999999999999998543111000
Q ss_pred ccccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccC
Q 002736 166 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 245 (886)
Q Consensus 166 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 245 (886)
.......++..|+|||.+.
T Consensus 184 -------------------------------------------------------------~~~~~~~~~~~y~apE~~~ 202 (290)
T cd05045 184 -------------------------------------------------------------VKRSKGRIPVKWMAIESLF 202 (290)
T ss_pred -------------------------------------------------------------hcccCCCCCccccCHHHHc
Confidence 0000013456799999998
Q ss_pred CCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 246 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 246 ~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+..++.++|||||||++|||++ ||... ........+.....++........+.+|+.+||+.+|.+||++.++++
T Consensus 203 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 203 DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-APERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred cCCcchHhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 8889999999999999999996 56433 333344444443333344456678889999999999999999999875
No 451
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.92 E-value=5.1e-25 Score=235.75 Aligned_cols=196 Identities=16% Similarity=0.160 Sum_probs=142.1
Q ss_pred cccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC---CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
...+|++++..++ .|. ....++++||| .+++|.+++.+. ...+++..++.++.||+.||+|||++||+||||
T Consensus 50 ~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di 125 (268)
T cd05086 50 RILQHPNILQCLG-QCV---EAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL 125 (268)
T ss_pred hccCCcchhheEE-Eec---CCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 3467889988777 444 34678999999 788999999643 234577788999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+|||++.++.++++|||++.........
T Consensus 126 kp~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------------------------- 155 (268)
T cd05086 126 ALRNCFLTSDLTVKVGDYGIGPSRYKEDYI-------------------------------------------------- 155 (268)
T ss_pred ccceEEEcCCccEEecccccccccCcchhh--------------------------------------------------
Confidence 999999999999999999987422110000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-------CCCCcccccchHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRLGVL 261 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDIwSlGvi 261 (886)
.......++..|+|||++.. ..++.++|||||||+
T Consensus 156 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~ 197 (268)
T cd05086 156 --------------------------------------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT 197 (268)
T ss_pred --------------------------------------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence 00011256788999998753 235789999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCC---C-ChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRV---L-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|||++ ||............+.... . +.......+.+.+++..|+ .+|.+||+++++++
T Consensus 198 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 198 LWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999996 6654443333322222221 1 2222234566778999999 67999999999975
No 452
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.92 E-value=2.6e-25 Score=241.60 Aligned_cols=199 Identities=17% Similarity=0.173 Sum_probs=146.7
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-----------CCcChHHHHHHHHHHHHHHHhh
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVEIVYAA 98 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-----------~~l~~~~~~~i~~qi~~~l~~l 98 (886)
.+...+|++++..++ ++. ..+..+++||| .+++|.+++.... ..+++..++.++.||+.||.||
T Consensus 70 ~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 145 (295)
T cd05097 70 IMSRLKNPNIIRLLG-VCV---SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL 145 (295)
T ss_pred HHHhCCCCCcCeEEE-EEc---CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 455567888888777 443 34567889998 8899999985421 2368889999999999999999
Q ss_pred cccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCC
Q 002736 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (886)
Q Consensus 99 Hs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 178 (886)
|++||+||||||+||+++.++.+|++|||++.........
T Consensus 146 H~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------- 185 (295)
T cd05097 146 ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY---------------------------------------- 185 (295)
T ss_pred HhcCeeccccChhhEEEcCCCcEEecccccccccccCcce----------------------------------------
Confidence 9999999999999999999999999999998543111000
Q ss_pred CccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchH
Q 002736 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (886)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSl 258 (886)
.......++..|+|||.+.+..++.++|||||
T Consensus 186 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl 217 (295)
T cd05097 186 ------------------------------------------------RIQGRAVLPIRWMAWESILLGKFTTASDVWAF 217 (295)
T ss_pred ------------------------------------------------eccCcCcCceeecChhhhccCCcCchhhHHHH
Confidence 00011245678999999988889999999999
Q ss_pred HHHHHHHhc-----CCCCCchhhHHhHhh---c---cCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 259 GVLLFELFC-----PFSTGEEKTRTMSSL---R---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 259 Gvil~eLl~-----pf~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||++|||++ ||............. . ...........++.+.+|+.+||..+|.+||++.++++
T Consensus 218 G~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 218 GVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999987 664433322211111 0 11112223335577889999999999999999999976
No 453
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.92 E-value=3.4e-25 Score=236.78 Aligned_cols=198 Identities=21% Similarity=0.247 Sum_probs=151.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
..+...+|++++..++ .+. ..+.++++||| .+++|.+++.. ....+++..+..++.||+.||.|||++||+|
T Consensus 54 ~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 129 (267)
T cd08228 54 DLLKQLNHPNVIKYLD-SFI---EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH 129 (267)
T ss_pred HHHHhCCCcceeeeee-eEE---ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence 3455668888888776 333 24678889999 77899988842 2345899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
+||||+||+++.++.++++|||++........
T Consensus 130 ~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------ 161 (267)
T cd08228 130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------------ 161 (267)
T ss_pred CCCCHHHEEEcCCCCEEECccccceeccchhH------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......|++.|+|||.+.+..++.++|||||||++|||
T Consensus 162 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el 199 (267)
T cd08228 162 ------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred ------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 00012578889999999888899999999999999999
Q ss_pred hc---CCCCCchh-hHHhHhhccCCCChhh-hccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 266 FC---PFSTGEEK-TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 266 l~---pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++ ||...... ......+.....++.. ......+.+++.+||..+|.+||++.++++
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 200 AALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred hcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 98 77544322 2333333333333333 234567889999999999999999999987
No 454
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.92 E-value=3.7e-25 Score=236.38 Aligned_cols=197 Identities=20% Similarity=0.257 Sum_probs=151.5
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
.+...+|++++..++ .+. ..+.++++||| .|++|.+++.. ....+++..++.++.||+.||.|||+.||+||
T Consensus 55 ~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 130 (267)
T cd08224 55 LLKQLDHPNVIKYLA-SFI---ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHR 130 (267)
T ss_pred HHHhCCCCCeeeeee-eee---cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 445567888877776 332 24678899999 78899998843 34568999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++.++.++++|||++........
T Consensus 131 dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 161 (267)
T cd08224 131 DIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------------- 161 (267)
T ss_pred CcChhhEEECCCCcEEEeccceeeeccCCCc-------------------------------------------------
Confidence 9999999999999999999998853321100
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 162 -----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~ 200 (267)
T cd08224 162 -----------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred -----------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHH
Confidence 001125688899999998888999999999999999999
Q ss_pred c---CCCCCch-hhHHhHhhccCCCChhhh-ccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 267 C---PFSTGEE-KTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 267 ~---pf~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+ ||..... .......+.....++.+. .....+.+++.+||..+|.+||++.++++
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 201 ALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 8 7644432 223333444444444433 45567889999999999999999999875
No 455
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=5.9e-26 Score=257.50 Aligned_cols=204 Identities=20% Similarity=0.240 Sum_probs=167.2
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-------------CCCcChHHHHHH
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHI 87 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-------------~~~l~~~~~~~i 87 (886)
.||.|. -.++..+|+|+|+++| +|. +.+++|+++|| ..|+|.+||+.. ...++..+.++|
T Consensus 535 dF~REa--eLla~l~H~nIVrLlG-VC~---~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~i 608 (774)
T KOG1026|consen 535 DFRREA--ELLAELQHPNIVRLLG-VCR---EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHI 608 (774)
T ss_pred HHHHHH--HHHHhccCCCeEEEEE-EEc---cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHH
Confidence 455554 4567779999999998 886 46899999999 889999999532 123788999999
Q ss_pred HHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhccc
Q 002736 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (886)
Q Consensus 88 ~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (886)
+.||+.|++||-++.+|||||-..|.||.+.-.|||+|||++++.=+.+.. +-+
T Consensus 609 A~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYY----------------------k~~---- 662 (774)
T KOG1026|consen 609 ATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYY----------------------KVR---- 662 (774)
T ss_pred HHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhh----------------------ccc----
Confidence 999999999999999999999999999999999999999999765222110 000
Q ss_pred ccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC
Q 002736 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (886)
Q Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (886)
.+. +=.-.|||||.|..+
T Consensus 663 -------------------------------------~~t-------------------------~lPIRWMppEsIly~ 680 (774)
T KOG1026|consen 663 -------------------------------------GNT-------------------------LLPIRWMPPESILYG 680 (774)
T ss_pred -------------------------------------CCc-------------------------eeeeecCCHHHhhcC
Confidence 000 113459999999999
Q ss_pred CCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHh
Q 002736 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (886)
Q Consensus 248 ~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 320 (886)
+||++|||||+||+|||+|+ |++.. .+..++..++.+..-+.+..+++++.+|+..||+.+|++||++.||-
T Consensus 681 kFTteSDVWs~GVvLWEIFsyG~QPy~gl-Sn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 681 KFTTESDVWSFGVVLWEIFSYGKQPYYGL-SNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cccchhhhhhhhhhhhhhhccccCccccc-chHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 99999999999999999999 77544 45566777777777888889999999999999999999999999974
No 456
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.92 E-value=3.1e-25 Score=235.34 Aligned_cols=192 Identities=17% Similarity=0.136 Sum_probs=147.1
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+.+.+|++++..++ ++.. +.++++||| .|++|.+++... ...+++..+..++.||+.||.|||+.|++||||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl 126 (254)
T cd05083 52 VMTKLHHKNLVRLLG-VILH----NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDL 126 (254)
T ss_pred HHHhCCCCCcCeEEE-EEcC----CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 455678888888776 3332 336888999 788999999654 346899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++.......
T Consensus 127 ~p~nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 154 (254)
T cd05083 127 AARNILVSEDGVAKVSDFGLARVGSMGV---------------------------------------------------- 154 (254)
T ss_pred CcceEEEcCCCcEEECCCccceeccccC----------------------------------------------------
Confidence 9999999999999999999884321000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.....+..|+|||.+.+..++.++|||||||++|||++
T Consensus 155 -----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~ 193 (254)
T cd05083 155 -----------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSY 193 (254)
T ss_pred -----------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhC
Confidence 00022456999999988889999999999999999985
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||....... ....+.....++.....++.+.+++.+||..+|.+||++.+++.
T Consensus 194 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 194 GRAPYPKMSLKE-VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCCccCCHHH-HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 664443332 22333333333333445677889999999999999999999875
No 457
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.92 E-value=3.4e-25 Score=241.56 Aligned_cols=198 Identities=17% Similarity=0.122 Sum_probs=149.2
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+...+|+|++..++ .|.. ...++++|| .+++|.+++......+++..+..++.||+.||.|||++||+||||
T Consensus 61 ~~~~~l~h~niv~~~~-~~~~----~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~di 135 (303)
T cd05110 61 LIMASMDHPHLVRLLG-VCLS----PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDL 135 (303)
T ss_pred HHHHhCCCCCcccEEE-EEcC----CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecccc
Confidence 3445567888888777 5543 234566777 789999999776667899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||+++.........
T Consensus 136 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~------------------------------------------------- 166 (303)
T cd05110 136 AARNVLVKSPNHVKITDFGLARLLEGDEKEY------------------------------------------------- 166 (303)
T ss_pred ccceeeecCCCceEEccccccccccCccccc-------------------------------------------------
Confidence 9999999999999999999986432110000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~ 207 (303)
T cd05110 167 ---------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 207 (303)
T ss_pred ---------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhC
Confidence 0001134677999999988889999999999999999985
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+.....++........+.+++..||..+|++||++.++++
T Consensus 208 g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 208 GGKPYDGIP-TREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 664332 22222333333333333445677889999999999999999999876
No 458
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=2.1e-25 Score=242.02 Aligned_cols=201 Identities=13% Similarity=0.100 Sum_probs=143.2
Q ss_pred ccccccCCCCCCcccccccc-CCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcc
Q 002736 34 HGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (886)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~N 112 (886)
..+|.+++..++ .+..... ....++++|+...++.+.+... ...++..++.|+.||+.||+|||++||+||||||+|
T Consensus 79 ~~~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~N 156 (294)
T PHA02882 79 NIDHLGIPKYYG-CGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPEN 156 (294)
T ss_pred cCCCCCCCcEEE-eeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 346777777665 3322211 1233677787777888777543 346888999999999999999999999999999999
Q ss_pred eeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCc
Q 002736 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (886)
Q Consensus 113 Ill~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (886)
||++..+.++++|||+++...........
T Consensus 157 ill~~~~~~~l~DFGla~~~~~~~~~~~~--------------------------------------------------- 185 (294)
T PHA02882 157 IMVDGNNRGYIIDYGIASHFIIHGKHIEY--------------------------------------------------- 185 (294)
T ss_pred EEEcCCCcEEEEEcCCceeeccCCccccc---------------------------------------------------
Confidence 99999999999999999654321100000
Q ss_pred cCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CC
Q 002736 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (886)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf 269 (886)
.........||+.|+|||.+.+..++.++|||||||+||||++ ||
T Consensus 186 --------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~ 233 (294)
T PHA02882 186 --------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPW 233 (294)
T ss_pred --------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 0000111368999999999999889999999999999999998 88
Q ss_pred CCCchhhHHh--------HhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 270 STGEEKTRTM--------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 270 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
.......... ..+..... .....++.+.+++..|+..+|.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 234 KGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 5553222211 11111111 12234567789999999999999999999876
No 459
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.92 E-value=4.6e-25 Score=235.84 Aligned_cols=198 Identities=18% Similarity=0.226 Sum_probs=150.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCeee
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
..+...+|++++..++ .+. ..+.++++||| .|++|.+++.. ....+++..++.++.||+.||.|||++||+|
T Consensus 54 ~~l~~~~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 129 (267)
T cd08229 54 DLLKQLNHPNVIKYYA-SFI---EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMH 129 (267)
T ss_pred HHHHHccCCchhhhhh-eeE---eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3445567888888776 332 34578889998 78899998853 2356899999999999999999999999999
Q ss_pred cccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccc
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 185 (886)
+||||+||+++.++.++++|||++........
T Consensus 130 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd08229 130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------------ 161 (267)
T ss_pred CCCCHHHEEEcCCCCEEECcchhhhccccCCc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred ccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHH
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eL 265 (886)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 162 ------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l 199 (267)
T cd08229 162 ------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred ------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHH
Confidence 00012578889999999888899999999999999999
Q ss_pred hc---CCCCCchh-hHHhHhhccCCCChhh-hccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 266 FC---PFSTGEEK-TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 266 l~---pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++ ||...... ......+.....++.. ...++.+.+++.+||..+|.+|||+.++++
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 200 AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 99 77544322 2222233322233222 235567889999999999999999998875
No 460
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=5.4e-25 Score=263.36 Aligned_cols=96 Identities=10% Similarity=0.109 Sum_probs=82.6
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+....|++++.++. ++. ..+.+|++||| .|++|.++|... +.+++..++.|+.||+.||+|||++|||||||||
T Consensus 58 l~~l~hp~Iv~~~~-~~~---~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP 132 (669)
T cd05610 58 LALSKSPFIVHLYY-SLQ---SANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKP 132 (669)
T ss_pred HHhcCCCCcCeEEE-EEE---ECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccH
Confidence 34557888888776 332 35678999999 699999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCC
Q 002736 111 SCFVMSSFNHVSFIESASCSDS 132 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~ 132 (886)
+||||+.++.+||+|||+++..
T Consensus 133 ~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 133 DNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred HHEEEcCCCCEEEEeCCCCccc
Confidence 9999999999999999999753
No 461
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.92 E-value=5.1e-25 Score=233.68 Aligned_cols=200 Identities=20% Similarity=0.244 Sum_probs=156.6
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC---CCCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
...+...+|++++.....++ + .+.++++||| .+++|.+++.+ ....+++..+..++.||+.||.|||+.||+
T Consensus 50 ~~~l~~l~~~~i~~~~~~~~-~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~ 125 (256)
T cd08530 50 IRILASVNHPNIISYKEAFL-D---GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKIL 125 (256)
T ss_pred HHHHHhCCCCCchhhhhhhc-c---CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 34455567888877666222 2 3678899998 78999999854 235689999999999999999999999999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
|+||+|+||+++.++.+|++|||++.......
T Consensus 126 h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~------------------------------------------------ 157 (256)
T cd08530 126 HRDLKSANILLVANDLVKIGDLGISKVLKKNM------------------------------------------------ 157 (256)
T ss_pred cCCCCcceEEEecCCcEEEeeccchhhhccCC------------------------------------------------
Confidence 99999999999999999999999885432110
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHH
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~e 264 (886)
.....+++.|+|||.+.+..++.++|+||||+++||
T Consensus 158 --------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~ 193 (256)
T cd08530 158 --------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYE 193 (256)
T ss_pred --------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHH
Confidence 000156788999999998889999999999999999
Q ss_pred Hhc---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCC
Q 002736 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (886)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 325 (886)
|++ ||...... ...........++.......++.+++.+||..+|.+||++.++++||++
T Consensus 194 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 194 MATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 998 66544432 3333334444444444566788999999999999999999999999975
No 462
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92 E-value=5.8e-25 Score=235.29 Aligned_cols=199 Identities=15% Similarity=0.138 Sum_probs=148.6
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcC------CCCCcChHHHHHHHHHHHHHHHhhcccC
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~------~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (886)
..+...+|++++..++ +|.+ .+..+++||| .|++|.++|.+ ....+++.+++.++.||+.||.|||++|
T Consensus 51 ~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (269)
T cd05044 51 HLMSNFNHPNIVKLLG-VCLL---NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH 126 (269)
T ss_pred HHHHhcCCCCeeeEee-eecC---CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455668888888666 5543 3567889998 88999999953 2234788999999999999999999999
Q ss_pred eeecccCCcceeeccCC-----ceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 103 IVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 103 iiHrDlkP~NIll~~~~-----~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
|+|+||||+||+++..+ .++++|||++..........
T Consensus 127 i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~-------------------------------------- 168 (269)
T cd05044 127 FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR-------------------------------------- 168 (269)
T ss_pred cccCCCChheEEEecCCCCCCcceEECCcccccccccccccc--------------------------------------
Confidence 99999999999999877 89999999985432110000
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
......++..|+|||.+.+..++.++||||
T Consensus 169 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 198 (269)
T cd05044 169 --------------------------------------------------KEGEGLLPVRWMAPESLLDGKFTTQSDVWS 198 (269)
T ss_pred --------------------------------------------------cCcccCCCccccCHHHHccCCcccchhHHH
Confidence 000013466799999999888999999999
Q ss_pred HHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 258 lGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||++|||++ ||..... ......+.....+......++.+.+++.+||..+|.+||++.++++
T Consensus 199 lG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 199 FGVLMWEILTLGQQPYPALNN-QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHHHHcCCCCCcccCH-HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999986 6643333 2333333333233333445677889999999999999999999875
No 463
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.92 E-value=3e-24 Score=224.98 Aligned_cols=265 Identities=22% Similarity=0.289 Sum_probs=219.9
Q ss_pred ccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEec-CCC
Q 002736 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 618 (886)
Q Consensus 540 ~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~-~~~ 618 (886)
...|-|||||++.-.-+.-..+-+..+..+.|+++.+.|||+-|++||.-.++.|||+........ .+.. ..-
T Consensus 437 gGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprik------aeltssap 510 (705)
T KOG0639|consen 437 GGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIK------AELTSSAP 510 (705)
T ss_pred cCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchh------hhcCCcch
Confidence 347889999998653332223345667789999999999999999999999999999986322111 1111 223
Q ss_pred CeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhc
Q 002736 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (886)
Q Consensus 619 ~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~ 698 (886)
.+.+++.+| +....++|..||.|.|||+.....++.|++|.+.+.||++++ ++..|-+|+-|.+|+.||+++
T Consensus 511 aCyALa~sp-DakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~-dGtklWTGGlDntvRcWDlre------ 582 (705)
T KOG0639|consen 511 ACYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISK-DGTKLWTGGLDNTVRCWDLRE------ 582 (705)
T ss_pred hhhhhhcCC-ccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecC-CCceeecCCCccceeehhhhh------
Confidence 466788898 677888888899999999999999999999999999999997 999999999999999999999
Q ss_pred cCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEE
Q 002736 699 LGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLK 777 (886)
Q Consensus 699 ~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~ 777 (886)
+..+........|.++.++|. +.++++|-.++.|-+...+... ...+.-|...|.+++|. .|++++|.+.|+-+.
T Consensus 583 -grqlqqhdF~SQIfSLg~cP~-~dWlavGMens~vevlh~skp~--kyqlhlheScVLSlKFa~cGkwfvStGkDnlLn 658 (705)
T KOG0639|consen 583 -GRQLQQHDFSSQIFSLGYCPT-GDWLAVGMENSNVEVLHTSKPE--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 658 (705)
T ss_pred -hhhhhhhhhhhhheecccCCC-ccceeeecccCcEEEEecCCcc--ceeecccccEEEEEEecccCceeeecCchhhhh
Confidence 665666666788999999999 8999999999988887766554 67788899999999997 999999999999999
Q ss_pred EEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEec
Q 002736 778 LWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 829 (886)
Q Consensus 778 lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~ 829 (886)
.|.+.-+.. +...+ ..+.|.++.+|.+++||+|||.|....||.+
T Consensus 659 awrtPyGas------iFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 659 AWRTPYGAS------IFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred hccCccccc------eeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 999887732 33333 4567999999999999999999999999975
No 464
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.92 E-value=3.4e-25 Score=239.22 Aligned_cols=203 Identities=21% Similarity=0.167 Sum_probs=147.0
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
..+....|++++.+++ ++.. .....++++||| .+++|.+++.+....+++..++.++.||+.||.|||++||+||||
T Consensus 57 ~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dl 134 (284)
T cd05081 57 EILKSLQHDNIVKYKG-VCYS-AGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDL 134 (284)
T ss_pred HHHHhCCCCCeeEEEE-EEcc-CCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence 3455668888887665 4433 233467899999 789999999665456899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++......... . .
T Consensus 135 kp~nili~~~~~~~l~dfg~~~~~~~~~~~--~-------------------------------~--------------- 166 (284)
T cd05081 135 ATRNILVESENRVKIGDFGLTKVLPQDKEY--Y-------------------------------K--------------- 166 (284)
T ss_pred CHhhEEECCCCeEEECCCcccccccCCCcc--e-------------------------------e---------------
Confidence 999999999999999999998543211000 0 0
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 207 (284)
T cd05081 167 ---------------------------------------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 207 (284)
T ss_pred ---------------------------------------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhc
Confidence 0000023445999999988889999999999999999998
Q ss_pred --CCCCCchhh---------------HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKT---------------RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++....... .....+.....++.....+..+.+|+.+||..+|++|||+.|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 208 SDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred CCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 221111000 001111122222333345567889999999999999999999976
No 465
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.92 E-value=5.9e-25 Score=238.89 Aligned_cols=199 Identities=17% Similarity=0.172 Sum_probs=145.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC----------CCcChHHHHHHHHHHHHHHHhhc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.+....|++++..++ ++. ..+.++++||| .+++|.+++.+.. ..+++..+..++.||+.||+|||
T Consensus 72 ~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH 147 (296)
T cd05095 72 IMSRLKDPNIIRLLA-VCI---TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS 147 (296)
T ss_pred HHHhCCCCCcceEEE-EEe---cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 345567888887766 443 34567899998 7889999985421 24677899999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
++||+||||||+|||++.++.++++|||++..........
T Consensus 148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------------- 187 (296)
T cd05095 148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR---------------------------------------- 187 (296)
T ss_pred HCCeecccCChheEEEcCCCCEEeccCcccccccCCccee----------------------------------------
Confidence 9999999999999999999999999999985432110000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||...+..++.++||||||
T Consensus 188 ------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG 219 (296)
T cd05095 188 ------------------------------------------------IQGRAVLPIRWMSWESILLGKFTTASDVWAFG 219 (296)
T ss_pred ------------------------------------------------ccCcCcCccccCCHHHHhcCCccchhhhhHHH
Confidence 00011345679999998888899999999999
Q ss_pred HHHHHHhc-----CCCCCchhhHHhHh---h---ccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC-----PFSTGEEKTRTMSS---L---RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~-----pf~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|||++ ||............ . ......+.....++.+.+|+.+||..||.+||++.++++
T Consensus 220 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 220 VTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999996 66443332221111 0 111122233345577889999999999999999999875
No 466
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.92 E-value=4.3e-25 Score=235.13 Aligned_cols=196 Identities=15% Similarity=0.163 Sum_probs=149.2
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ +. ..+.++++||| .+++|.+++.+. ...+++.++..++.||+.||.|||+.||+||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~----~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl 128 (260)
T cd05067 54 LMKQLQHPRLVRLYA-VV----TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDL 128 (260)
T ss_pred HHHhcCCcCeeeEEE-EE----ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence 444557888888766 33 23457888998 789999998543 356899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||++.........
T Consensus 129 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------- 158 (260)
T cd05067 129 RAANILVSETLCCKIADFGLARLIEDNEYT-------------------------------------------------- 158 (260)
T ss_pred cHHhEEEcCCCCEEEccCcceeecCCCCcc--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~ 199 (260)
T cd05067 159 ---------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTY 199 (260)
T ss_pred ---------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhC
Confidence 0001134567999999988889999999999999999997
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+.....++.....+..+.+++.+||..+|++||++++++.
T Consensus 200 g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 200 GRIPYPGMT-NPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CCCCCCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 664433 33333334333333434445567889999999999999999999875
No 467
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-25 Score=234.48 Aligned_cols=80 Identities=15% Similarity=0.105 Sum_probs=65.5
Q ss_pred cCCCCCCccccccccCCceEEEEeeCCcchhhhhcC-CCCCcChHHHHHHHHHHHHHHHhhccc-CeeecccCCcceeec
Q 002736 39 RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCFVMS 116 (886)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~-giiHrDlkP~NIll~ 116 (886)
-+|+++.-+--...+..++|+|+|+.|-+|..||++ ..+.++...++.|++||+.||+|||.+ ||||.||||+||||.
T Consensus 143 ~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 143 CVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 345544422233456678999999999999999954 457899999999999999999999976 999999999999996
Q ss_pred cC
Q 002736 117 SF 118 (886)
Q Consensus 117 ~~ 118 (886)
..
T Consensus 223 ~~ 224 (590)
T KOG1290|consen 223 ST 224 (590)
T ss_pred cc
Confidence 54
No 468
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=5.6e-25 Score=234.33 Aligned_cols=197 Identities=14% Similarity=0.152 Sum_probs=150.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ ++. ....++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++||+|+||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di 129 (261)
T cd05034 54 IMKKLRHDKLVQLYA-VCS---EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDL 129 (261)
T ss_pred HHhhCCCCCEeeeee-eee---cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 344567888888776 333 33568889998 7899999996543 57899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||++.........
T Consensus 130 ~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------------------------------------------------- 159 (261)
T cd05034 130 AARNILVGENLVCKIADFGLARLIEDDEYT-------------------------------------------------- 159 (261)
T ss_pred chheEEEcCCCCEEECccccceeccchhhh--------------------------------------------------
Confidence 999999999999999999998543211000
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
.......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~ 200 (261)
T cd05034 160 ---------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTY 200 (261)
T ss_pred ---------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhC
Confidence 0000023456999999998889999999999999999997
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||.... .......+......+.....+..+.+++.+||..+|.+||++.++++
T Consensus 201 g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 201 GRVPYPGMT-NREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 664433 33333444433333334445677889999999999999999999875
No 469
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.92 E-value=4.9e-25 Score=237.33 Aligned_cols=200 Identities=15% Similarity=0.109 Sum_probs=151.9
Q ss_pred CceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeec
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHr 106 (886)
+...+...+|++++..++ +|.. ..++++||| .+++|.+++.+....+++..+..++.||+.||.|||++||+||
T Consensus 59 e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~ 133 (279)
T cd05057 59 EAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHR 133 (279)
T ss_pred HHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEec
Confidence 334455568888888776 5653 567788888 8899999997766678999999999999999999999999999
Q ss_pred ccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccc
Q 002736 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (886)
Q Consensus 107 DlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 186 (886)
||||+||+++.++.+|++|||+++........ .
T Consensus 134 di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~--~--------------------------------------------- 166 (279)
T cd05057 134 DLAARNVLVKTPQHVKITDFGLAKLLDVDEKE--Y--------------------------------------------- 166 (279)
T ss_pred ccCcceEEEcCCCeEEECCCcccccccCcccc--e---------------------------------------------
Confidence 99999999999999999999998644211000 0
Q ss_pred cccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHh
Q 002736 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (886)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl 266 (886)
......++..|+|||.+....++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05057 167 -----------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELM 205 (279)
T ss_pred -----------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHh
Confidence 000002345699999998888999999999999999999
Q ss_pred c----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+ ||....... ....+......+........+.+++.+||..+|..||++.++++
T Consensus 206 ~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 206 TFGAKPYEGIPAVE-IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred cCCCCCCCCCCHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 6 665443332 23333333333333445677889999999999999999999865
No 470
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.92 E-value=7.4e-25 Score=237.34 Aligned_cols=199 Identities=18% Similarity=0.214 Sum_probs=149.3
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++.++. .+. ....++++||| .+++|.++|... ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 63 ~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil 137 (290)
T cd05613 63 QSPFLVTLHY-AFQ---TDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENIL 137 (290)
T ss_pred cCCChhceee-Eee---cCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeE
Confidence 5677776655 222 23568899999 888999999654 56899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.+|++|||++.........
T Consensus 138 ~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------------------- 161 (290)
T cd05613 138 LDSNGHVVLTDFGLSKEFHEDEVE-------------------------------------------------------- 161 (290)
T ss_pred ECCCCCEEEeeCccceeccccccc--------------------------------------------------------
Confidence 999999999999998543211000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC--CCCcccccchHHHHHHHHhc---CC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC---PF 269 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDIwSlGvil~eLl~---pf 269 (886)
......|+..|+|||.+.+. .++.++|||||||++|+|++ ||
T Consensus 162 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~ 208 (290)
T cd05613 162 ---------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPF 208 (290)
T ss_pred ---------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCC
Confidence 00112678899999998753 47889999999999999999 66
Q ss_pred CCCchh---hHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCC-----CHHHHhcCCCCCCCc
Q 002736 270 STGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (886)
Q Consensus 270 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----s~~eil~h~~~~~~~ 329 (886)
...... ......+.. ..++......+.+.+++.+||..+|.+|| ++.+++.||||....
T Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 209 TVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CcCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 432211 111111111 12223334567788999999999999997 899999999998764
No 471
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.92 E-value=2.7e-24 Score=221.43 Aligned_cols=266 Identities=17% Similarity=0.239 Sum_probs=217.6
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
.+.+.+|..|..|++|+..-.+ .++ .+.+.+..++|++++|++++.++++++.|+.+++|++..... ...
T Consensus 187 sdtlatgg~Dr~Ik~W~v~~~k--~~~-~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~-------~~T 256 (459)
T KOG0288|consen 187 SDTLATGGSDRIIKLWNVLGEK--SEL-ISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRL-------RHT 256 (459)
T ss_pred cchhhhcchhhhhhhhhcccch--hhh-hhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhh-------hhh
Confidence 3667888999999999977655 223 355677889999999999999999999999999999876311 112
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCch
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~ 692 (886)
..+|..+|+++.|.. ....+++|+.|.+|++||+....+.+++- ....+++|..+ +..+++|-.|++|++||+++
T Consensus 257 LsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs 331 (459)
T KOG0288|consen 257 LSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS---ISDVISGHFDKKVRFWDIRS 331 (459)
T ss_pred hcccccceeeehhhc-cccceeeccccchhhhhhhhhhheecccc-ccccccceEec---ceeeeecccccceEEEeccC
Confidence 345999999999986 34449999999999999999988776653 24456666654 56889999999999999999
Q ss_pred hhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEecC----CCCeEEEEec-CCCEE
Q 002736 693 AILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH----NKTVSYVKFV-DATTL 767 (886)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h----~~~V~~v~f~-~~~~l 767 (886)
......++..+.|+++..+++ +..+.+++.|.++.+.|+|+... ...+.+. ....+.+.|+ ++.|+
T Consensus 332 -------~~~~~sv~~gg~vtSl~ls~~-g~~lLsssRDdtl~viDlRt~eI-~~~~sA~g~k~asDwtrvvfSpd~~Yv 402 (459)
T KOG0288|consen 332 -------ADKTRSVPLGGRVTSLDLSMD-GLELLSSSRDDTLKVIDLRTKEI-RQTFSAEGFKCASDWTRVVFSPDGSYV 402 (459)
T ss_pred -------CceeeEeecCcceeeEeeccC-CeEEeeecCCCceeeeecccccE-EEEeeccccccccccceeEECCCCcee
Confidence 788888888899999999999 88888889999999999999874 4444321 1237889997 99999
Q ss_pred EEEECCCcEEEEeCCCCCccccCCCceEeecCCC--ceeEEEEecCCCEEEEEcCCCcEEEEe
Q 002736 768 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN--VKNFVGLSVWDGYVATGSETNEVFVYH 828 (886)
Q Consensus 768 ~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~--~v~~v~~sp~g~~lasgs~Dg~v~iwd 828 (886)
++||.||.|+||++.+++. ...+..... .|++++|+|.|.++++++.++.+++|.
T Consensus 403 aAGS~dgsv~iW~v~tgKl------E~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 403 AAGSADGSVYIWSVFTGKL------EKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eeccCCCcEEEEEccCceE------EEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 9999999999999999854 444544333 599999999999999999999999993
No 472
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=6.7e-25 Score=235.69 Aligned_cols=197 Identities=19% Similarity=0.219 Sum_probs=148.3
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC--------CCcChHHHHHHHHHHHHHHHhhccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~--------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (886)
.+...+|++++..++ .+.+ .+.++++||| .+++|.+++.... ..+++..++.++.||+.||.|||++
T Consensus 61 ~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 136 (275)
T cd05046 61 MFRKLSHKNVVRLLG-LCRE---AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA 136 (275)
T ss_pred HHHhcCCcceeeeEE-EECC---CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 455567888877666 4433 4568899999 7799999995432 1589999999999999999999999
Q ss_pred CeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcc
Q 002736 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (886)
Q Consensus 102 giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 181 (886)
||+||||||+||+++..+.++++|||++.........
T Consensus 137 ~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~------------------------------------------- 173 (275)
T cd05046 137 RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY------------------------------------------- 173 (275)
T ss_pred CcccCcCccceEEEeCCCcEEEcccccccccCccccc-------------------------------------------
Confidence 9999999999999999999999999987532111000
Q ss_pred ccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHH
Q 002736 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (886)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvi 261 (886)
......++..|+|||.+.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 207 (275)
T cd05046 174 ----------------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVL 207 (275)
T ss_pred ----------------------------------------------ccCCceeEEeecChhhhccCCCCchhhHHHHHHH
Confidence 0001145667999999988888999999999999
Q ss_pred HHHHhc----CCCCCchhhHHhHhhccCCC-ChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 262 LFELFC----PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 262 l~eLl~----pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
+|+|++ ||...... ........... .+.....+..+.+++.+||..+|.+||++.|++.
T Consensus 208 l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 208 MWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred HHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999997 66443333 23333332222 2222345567889999999999999999999986
No 473
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.92 E-value=7.4e-25 Score=232.69 Aligned_cols=193 Identities=15% Similarity=0.137 Sum_probs=148.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-CCcChHHHHHHHHHHHHHHHhhcccCeeeccc
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDl 108 (886)
.+...+|++++..++ ++.+ .+.++++||| .+++|.+++.+.. ..+++..+..++.||+.||.|||++||+|+||
T Consensus 53 ~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di 128 (256)
T cd05039 53 VMTTLRHPNLVQLLG-VVLQ---GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDL 128 (256)
T ss_pred HHHhcCCcceeeeEE-EEcC---CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhc
Confidence 444567888887666 4443 5678899998 6789999996543 36899999999999999999999999999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.+|++|||.++......
T Consensus 129 ~p~Nili~~~~~~~l~d~g~~~~~~~~~---------------------------------------------------- 156 (256)
T cd05039 129 AARNVLVSEDLVAKVSDFGLAKEASQGQ---------------------------------------------------- 156 (256)
T ss_pred ccceEEEeCCCCEEEccccccccccccc----------------------------------------------------
Confidence 9999999999999999999985431100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -----------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~ 195 (256)
T cd05039 157 -----------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 195 (256)
T ss_pred -----------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhc
Confidence 00123456999999988889999999999999999986
Q ss_pred ---CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||... ........+.....+......++.+.+++.+||..+|.+||++.++++
T Consensus 196 g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 196 GRVPYPRI-PLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCCCCCCC-CHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 55433 333333333333333333445678889999999999999999999875
No 474
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.92 E-value=4.6e-23 Score=203.47 Aligned_cols=292 Identities=22% Similarity=0.299 Sum_probs=219.2
Q ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCcccCccc----ccc----cceEEecCCCCeeeEEEeCCCCCeEEE
Q 002736 565 LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENR----DIH----YPVVEMASRSKLSSICWNSYIKSQIAS 635 (886)
Q Consensus 565 ~~h~~~V~sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~----~~~----~~~~~~~~~~~I~~l~~~~~~~~~las 635 (886)
..|.+.|.++...+ .|+++++||.||.|.|||++....... ..+ ....+..|+-.|+.+-|-|.+..++.|
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 45889999999998 789999999999999999976321110 000 111234688899999999999999999
Q ss_pred ecCCCcEEEEECCCceEEEEecccCCcEEEEEEccCC--CCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCe
Q 002736 636 SNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANV 712 (886)
Q Consensus 636 ~s~Dg~V~iWd~~t~~~~~~~~~h~~~v~~v~~~p~~--~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v 712 (886)
+++|.+++|||..|.+....|+ .++.|.+-+++|.. ..++|+|.+|-.|+|.|+.+ +...+++. |...|
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S-------Gs~sH~LsGHr~~v 191 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS-------GSFSHTLSGHRDGV 191 (397)
T ss_pred ccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccC-------CcceeeeccccCce
Confidence 9999999999999999887775 46778888888743 35788999999999999999 66666666 46789
Q ss_pred EEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEE--------------EecCCCCeEEEEec-CCCEEEEEECCCcEE
Q 002736 713 CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT--------------LIGHNKTVSYVKFV-DATTLVSASTDNTLK 777 (886)
Q Consensus 713 ~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~--------------~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~ 777 (886)
.+|.|+|.+...|++|+.||.|++||+|....+... -..|.+.|.+++|. ++.++++++.|..++
T Consensus 192 laV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r 271 (397)
T KOG4283|consen 192 LAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIR 271 (397)
T ss_pred EEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceE
Confidence 999999997788999999999999999976322332 34677789999996 999999999999999
Q ss_pred EEeCCCCCccccCCCceEee--cCCCceeEEEE---ecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccc
Q 002736 778 LWDLSMCTSRVIDTPLHSFT--GHTNVKNFVGL---SVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETD 852 (886)
Q Consensus 778 lwd~~~~~~~~~~~~~~~~~--~h~~~v~~v~~---sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 852 (886)
+|+..++... +..+. .|. .....++ +.+...++---.|+.+.++.+-.+..+..+.
T Consensus 272 ~wn~~~G~nt-----l~~~g~~~~n-~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~------------- 332 (397)
T KOG4283|consen 272 VWNMESGRNT-----LREFGPIIHN-QTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLS------------- 332 (397)
T ss_pred EeecccCccc-----cccccccccc-ccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeee-------------
Confidence 9999887532 11111 011 1111111 2222333333345677777777766665443
Q ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCCEEEEE
Q 002736 853 DAAQFISSVCWRGQSSNTLVAANSSGNIKILE 884 (886)
Q Consensus 853 ~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~ 884 (886)
.|...|.+.++.|+-. .+.++.-|++|.-|-
T Consensus 333 ~h~k~i~c~~~~~~fq-~~~tg~~d~ni~~w~ 363 (397)
T KOG4283|consen 333 THLKRINCAAYRPDFE-QCFTGDMNGNIYMWS 363 (397)
T ss_pred cccceeeEEeecCchh-hhhccccCCcccccc
Confidence 2344599999999988 899999999999885
No 475
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=4.6e-23 Score=215.11 Aligned_cols=292 Identities=16% Similarity=0.255 Sum_probs=236.1
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEE
Q 002736 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (886)
Q Consensus 567 h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd 646 (886)
..+.|+|+.|+|.-.++++||.|+.++||.++...+... + ...-...+|.+.+|.|...+.+++++.-.....||
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~l---q--S~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKL---Q--SIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhh---e--eeeeccCccceeeecCCCceEEEecccceEEEEee
Confidence 456899999999999999999999999999986433211 1 11225678999999995444999999999999999
Q ss_pred CCCceEE--EEecccC-CcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCc
Q 002736 647 VSRSQVL--TEMREHE-RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGR 723 (886)
Q Consensus 647 ~~t~~~~--~~~~~h~-~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 723 (886)
+.+.+.. ....++. ..+.....+| ++++++..+..|.|.|....+ +..+.+++..+.|..++|+.+ ++
T Consensus 287 le~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT-------~eli~s~KieG~v~~~~fsSd-sk 357 (514)
T KOG2055|consen 287 LETAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKT-------KELITSFKIEGVVSDFTFSSD-SK 357 (514)
T ss_pred ccccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhh-------hhhhheeeeccEEeeEEEecC-Cc
Confidence 9988753 3333443 4566777887 889999999999999999998 788888899999999999988 78
Q ss_pred EEEEEeCCCeEEEEecCCCCcceEEEecCCCCeE--EEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCC
Q 002736 724 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVS--YVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT 800 (886)
Q Consensus 724 ~l~~gs~Dg~I~vwDlr~~~~~~~~~~~h~~~V~--~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~ 800 (886)
.|++.+.+|.|++||++... +++.+.. .+.|. +++.+ ++.+||+||..|.|.|||..+.......+|+.++..-+
T Consensus 358 ~l~~~~~~GeV~v~nl~~~~-~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLt 435 (514)
T KOG2055|consen 358 ELLASGGTGEVYVWNLRQNS-CLHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLT 435 (514)
T ss_pred EEEEEcCCceEEEEecCCcc-eEEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhh
Confidence 88888889999999999986 4777763 34444 44545 99999999999999999988766555668899998888
Q ss_pred CceeEEEEecCCCEEEEEcC--CCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCC
Q 002736 801 NVKNFVGLSVWDGYVATGSE--TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSG 878 (886)
Q Consensus 801 ~~v~~v~~sp~g~~lasgs~--Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg 878 (886)
..|+++.|+++++.||-+|. ++.+++-++.+...... |... ...-+.|.|++|+|.|. +||.|+.+|
T Consensus 436 t~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsN--fP~~--------n~~vg~vtc~aFSP~sG-~lAvGNe~g 504 (514)
T KOG2055|consen 436 TAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSN--FPTS--------NTKVGHVTCMAFSPNSG-YLAVGNEAG 504 (514)
T ss_pred eeeeeeeeCcchhhhhhhhhccccceEEEeccceeeecc--CCCC--------CCcccceEEEEecCCCc-eEEeecCCC
Confidence 99999999999998887775 78999999887543322 2111 23346799999999999 999999999
Q ss_pred CEEEEEe
Q 002736 879 NIKILEM 885 (886)
Q Consensus 879 ~I~iw~l 885 (886)
.+.+|.|
T Consensus 505 rv~l~kL 511 (514)
T KOG2055|consen 505 RVHLFKL 511 (514)
T ss_pred ceeeEee
Confidence 9999986
No 476
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.92 E-value=1.6e-23 Score=226.17 Aligned_cols=295 Identities=20% Similarity=0.334 Sum_probs=214.4
Q ss_pred EEEEEcC---CCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECC
Q 002736 572 CSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (886)
Q Consensus 572 ~sl~f~~---d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~ 648 (886)
.++.|++ ....||.+..+|.|.+||........ ........+.|...|..+.|.| ....|++.+.|.++++||+.
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~-ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRL-EERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcch-hhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeec
Confidence 4466665 34688899999999999987643321 1122344568999999999999 78899999999999999999
Q ss_pred CceEEEE--ecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhh--hhcc---------C--ceeee----ee--
Q 002736 649 RSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL--LLHL---------G--VSIGT----IK-- 707 (886)
Q Consensus 649 t~~~~~~--~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~--~~~~---------~--~~~~~----~~-- 707 (886)
++..+.. +.+|.+.|.+++|.|.++..|++|+.||.|.|||++.... ...+ + .+... +.
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 9988766 8899999999999999999999999999999999976431 0000 0 00000 00
Q ss_pred --cCCCeEE---EEEeCCCCcEEEEEeC-CCeEEEEecCCCCc-----ceEE--EecCCC-C--eEEEEe-cCCCEEEEE
Q 002736 708 --TKANVCC---VQFPLDSGRSLAFGSA-DHRIYYYDLRNSKI-----PLCT--LIGHNK-T--VSYVKF-VDATTLVSA 770 (886)
Q Consensus 708 --~~~~v~~---v~~sp~~~~~l~~gs~-Dg~I~vwDlr~~~~-----~~~~--~~~h~~-~--V~~v~f-~~~~~l~sg 770 (886)
....|.+ +-+..| ...||++++ |+.|+|||+|+... |... +..|.. . +.++.. +.|.+|+..
T Consensus 211 kA~s~ti~ssvTvv~fkD-e~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~As 289 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLFKD-ESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFAS 289 (720)
T ss_pred ccccCceeeeeEEEEEec-cceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEE
Confidence 1122333 444556 678888777 99999999997643 2222 222311 2 233333 267888888
Q ss_pred ECCCcEEEEeCCCCCccccCCCceEeecCCCceeEE--EEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCC
Q 002736 771 STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV--GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSG 848 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v--~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 848 (886)
+.|++|.+|++..... .|+..+.+|.+.-..+ ..+|++.+|++|+.|..+++|.+...+.-...
T Consensus 290 CtD~sIy~ynm~s~s~----sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~---------- 355 (720)
T KOG0321|consen 290 CTDNSIYFYNMRSLSI----SPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPAL---------- 355 (720)
T ss_pred ecCCcEEEEeccccCc----CchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhh----------
Confidence 8899999999998764 6788888776543332 58999999999999999999999876543222
Q ss_pred CccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 849 PETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 849 ~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
.-+|...|.+|+|.|.-..-++|++.|-.++||++
T Consensus 356 --l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 356 --LLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred --hhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence 24556679999998754334888899999999987
No 477
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.92 E-value=8e-25 Score=235.80 Aligned_cols=199 Identities=19% Similarity=0.175 Sum_probs=150.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCC-------CCcChHHHHHHHHHHHHHHHhhcccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVYAAHSQG 102 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~-------~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (886)
.+...+|++++..++ +|..+ ...+++++|| .+++|.++|.... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~l~~l~h~ni~~~~~-~~~~~--~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 137 (280)
T cd05043 61 LLYGLSHQNILPILH-VCIED--GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG 137 (280)
T ss_pred HHHhCCCCCCCeEEE-EEecC--CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 344558899888776 55432 4567888888 7789999985431 45899999999999999999999999
Q ss_pred eeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccc
Q 002736 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (886)
Q Consensus 103 iiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 182 (886)
|+||||||+||+++.++.+|++|||+++.........
T Consensus 138 i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~------------------------------------------- 174 (280)
T cd05043 138 VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHC------------------------------------------- 174 (280)
T ss_pred EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEE-------------------------------------------
Confidence 9999999999999999999999999986442111000
Q ss_pred cccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHH
Q 002736 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (886)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil 262 (886)
......++..|+|||.+.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 209 (280)
T cd05043 175 ---------------------------------------------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLL 209 (280)
T ss_pred ---------------------------------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence 00001345679999999888899999999999999
Q ss_pred HHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 263 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 263 ~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||+++ ||..... ......+.....++.....++.+.+++.+||..+|++|||+.++++
T Consensus 210 ~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 210 WELMTLGQTPYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHhcCCCCCcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99996 6654433 3333333333333333445677889999999999999999999985
No 478
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.92 E-value=6.6e-25 Score=246.94 Aligned_cols=156 Identities=13% Similarity=0.143 Sum_probs=120.3
Q ss_pred CcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCc
Q 002736 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (886)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (886)
.+++..+..|+.||+.||.|||++||+||||||+|||++..+.+|++|||+++........
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------------------- 295 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY------------------- 295 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-------------------
Confidence 3567788999999999999999999999999999999999999999999998543211000
Q ss_pred hhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccc
Q 002736 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (886)
Q Consensus 158 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (886)
.......++..
T Consensus 296 ---------------------------------------------------------------------~~~~~~~~~~~ 306 (401)
T cd05107 296 ---------------------------------------------------------------------ISKGSTFLPLK 306 (401)
T ss_pred ---------------------------------------------------------------------ccCCCcCCCCc
Confidence 00001156778
Q ss_pred eecccccCCCCCCcccccchHHHHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCC
Q 002736 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 238 Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (886)
|+|||.+.+..++.++|||||||++|||++ ||............+.....++.+...+..+.+|+.+||+.+|.+|
T Consensus 307 y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~R 386 (401)
T cd05107 307 WMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIR 386 (401)
T ss_pred eeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence 999999988889999999999999999996 6644433333333333333333344556788999999999999999
Q ss_pred CCHHHHhc
Q 002736 314 PKMGELLQ 321 (886)
Q Consensus 314 ps~~eil~ 321 (886)
|++.++++
T Consensus 387 Ps~~ell~ 394 (401)
T cd05107 387 PDFSQLVH 394 (401)
T ss_pred cCHHHHHH
Confidence 99999986
No 479
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.92 E-value=7.3e-25 Score=233.37 Aligned_cols=203 Identities=13% Similarity=0.141 Sum_probs=152.3
Q ss_pred ccccccCceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC-CCCcChHHHHHHHHHHHHHHHhhc
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 99 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lH 99 (886)
.|+.|.. .+...+|++++..++ .+.+ ..++++||| .+++|.+++.+. ...++...++.++.||+.||.|||
T Consensus 47 ~~~~e~~--~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 47 AFLAEAN--VMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred HHHHHHH--HHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 3444433 445567888888766 3322 567889999 678999999653 456788999999999999999999
Q ss_pred ccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCC
Q 002736 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (886)
Q Consensus 100 s~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 179 (886)
+.|++|+||||+||+++..+.+|++|||.+.........
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------- 158 (260)
T cd05073 120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT----------------------------------------- 158 (260)
T ss_pred hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-----------------------------------------
Confidence 999999999999999999999999999988533211000
Q ss_pred ccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHH
Q 002736 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (886)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlG 259 (886)
......++..|+|||.+.+..++.++||||||
T Consensus 159 ------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG 190 (260)
T cd05073 159 ------------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 190 (260)
T ss_pred ------------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHH
Confidence 00001345669999999888899999999999
Q ss_pred HHHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 260 vil~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|++|+|++ ||... ........+......+.....+..+.+++.+||+.+|.+||++.+++.
T Consensus 191 ~~l~~l~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 191 ILLMEIVTYGRIPYPGM-SNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHhcCCCCCCCC-CHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999997 66443 333333444444333444455677889999999999999999998864
No 480
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92 E-value=3.8e-25 Score=262.28 Aligned_cols=217 Identities=18% Similarity=0.257 Sum_probs=149.7
Q ss_pred ceeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC----------CCCcChHHHHHHHHHHHHHHHh
Q 002736 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIVEIVYA 97 (886)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~----------~~~l~~~~~~~i~~qi~~~l~~ 97 (886)
...+...+|++++..++ ++. ..+..+++||| .|++|.++|... ...++...++.++.||+.||+|
T Consensus 53 i~ILs~L~HPNIVkl~~-v~~---d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~y 128 (932)
T PRK13184 53 AKIAADLIHPGIVPVYS-ICS---DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEY 128 (932)
T ss_pred HHHHHhCCCcCcCeEEE-EEe---eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHH
Confidence 44556678999988776 554 34678899999 889999988531 1234567889999999999999
Q ss_pred hcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCC
Q 002736 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (886)
Q Consensus 98 lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 177 (886)
||++||+||||||+|||++.++.+|++|||++............ ....
T Consensus 129 LHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~--------------------------------l~~~ 176 (932)
T PRK13184 129 VHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD--------------------------------IDVD 176 (932)
T ss_pred HHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccc--------------------------------cccc
Confidence 99999999999999999999999999999999654221100000 0000
Q ss_pred CCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccch
Q 002736 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (886)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwS 257 (886)
.. ..+ . .........+||+.|+|||.+.+..++.++||||
T Consensus 177 ~~----~s~----------------------------~--------s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWS 216 (932)
T PRK13184 177 ER----NIC----------------------------Y--------SSMTIPGKIVGTPDYMAPERLLGVPASESTDIYA 216 (932)
T ss_pred cc----ccc----------------------------c--------cccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHH
Confidence 00 000 0 0000011237999999999999999999999999
Q ss_pred HHHHHHHHhc---CCCCCchhhHHhHhhccCC-CChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 258 lGvil~eLl~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||++|||++ ||................. ........++.+.+++.+||..||.+||+..+.+.
T Consensus 217 LGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 217 LGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred HHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999 7755333222221111111 01112345677889999999999999987665543
No 481
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92 E-value=7.2e-25 Score=235.87 Aligned_cols=213 Identities=18% Similarity=0.210 Sum_probs=153.7
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++..++ ++. ..+.++++||+ .+++|.+++.+. +.+++..++.++.||+.||.|||+.|++|+||||+||+
T Consensus 60 ~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~ 134 (280)
T cd05581 60 GHPGIIKLYY-TFQ---DEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENIL 134 (280)
T ss_pred cCCCchhHHH-Hhc---CCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence 3888887766 333 34678899999 599999999664 47899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.++++|||++.............. +. +.
T Consensus 135 i~~~~~~~l~df~~~~~~~~~~~~~~~~~--------------------------~~--------------~~------- 167 (280)
T cd05581 135 LDKDMHIKITDFGTAKVLDPNSSPESNKG--------------------------DA--------------TN------- 167 (280)
T ss_pred ECCCCCEEecCCccccccCCccccccCCC--------------------------CC--------------cc-------
Confidence 99999999999999865533221100000 00 00
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~ 271 (886)
+.. .............++..|+|||.+.+..++.++|||||||++|+|++ ||..
T Consensus 168 ---------------~~~--------~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (280)
T cd05581 168 ---------------IDS--------QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRG 224 (280)
T ss_pred ---------------ccc--------cccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 000 00000001122367889999999988889999999999999999999 6654
Q ss_pred CchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH----HHHhcCCCC
Q 002736 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 325 (886)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~----~eil~h~~~ 325 (886)
....... ...... ........++.+.+|+.+||..+|.+||++ +++++||||
T Consensus 225 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 225 SNEYLTF-QKILKL-EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred ccHHHHH-HHHHhc-CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 4432222 222211 111222345778899999999999999999 999999997
No 482
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.92 E-value=1.1e-24 Score=230.44 Aligned_cols=197 Identities=20% Similarity=0.246 Sum_probs=153.2
Q ss_pred ecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
+...+|++++..+. .+. ..+..+++||+ .+++|.+++... ..+++..+..++.||+.||.|||++|++|+||||
T Consensus 47 l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p 121 (250)
T cd05123 47 LSRINHPFIVKLHY-AFQ---TEEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKP 121 (250)
T ss_pred HHHcCCCcHHHHHH-Hee---cCCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCc
Confidence 44456888877665 332 35678899999 599999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++.++.++++|||++........
T Consensus 122 ~ni~~~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------------- 148 (250)
T cd05123 122 ENILLDADGHIKLTDFGLAKELSSEGS----------------------------------------------------- 148 (250)
T ss_pred ceEEEcCCCcEEEeecCcceecccCCC-----------------------------------------------------
Confidence 999999999999999998854321100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~--- 267 (886)
......++..|+|||.+.+..++.++|+||||+++|||++
T Consensus 149 -------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~ 191 (250)
T cd05123 149 -------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP 191 (250)
T ss_pred -------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence 0011256778999999988888999999999999999999
Q ss_pred CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCH---HHHhcCCCC
Q 002736 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 325 (886)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~---~eil~h~~~ 325 (886)
||...... .....+... ..+.....+..+.+++.+||..||..||++ .++++||||
T Consensus 192 p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 192 PFYAEDRK-EIYEKILKD-PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCCHH-HHHHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 77554432 222222221 222223345778899999999999999999 999999997
No 483
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.91 E-value=5.7e-23 Score=212.72 Aligned_cols=270 Identities=19% Similarity=0.250 Sum_probs=227.4
Q ss_pred cccccccccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceE
Q 002736 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (886)
Q Consensus 533 ~~~~~~~~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~ 612 (886)
.+..++|..|..+.++|..+.+..+.+ .||...|+++.|+|+...+++++.|..|+||..... ..+..
T Consensus 231 ~~~ilTGG~d~~av~~d~~s~q~l~~~-----~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~-------s~~~~ 298 (506)
T KOG0289|consen 231 SSKILTGGEDKTAVLFDKPSNQILATL-----KGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS-------SEPTS 298 (506)
T ss_pred CCcceecCCCCceEEEecchhhhhhhc-----cCcceEEEEEEeccchhheeecCCcceEEeeccccc-------cCccc
Confidence 355678888989999999999888777 689999999999999999999999999999997653 24455
Q ss_pred EecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecc--cCCcEEEEEEccCCCCEEEEEeCCCcEEEEeC
Q 002736 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (886)
Q Consensus 613 ~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~ 690 (886)
...|.++|+.+..+| ++.+|++++.||+....|++++..+..... ..-.+++..|+| |+.+|.+|..||.|+|||+
T Consensus 299 ~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdl 376 (506)
T KOG0289|consen 299 SRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDL 376 (506)
T ss_pred cccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEc
Confidence 567999999999999 799999999999999999999987765532 335689999999 9999999999999999999
Q ss_pred chhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCCcceEEEec-CCCCeEEEEec-CCCEE
Q 002736 691 NQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTL 767 (886)
Q Consensus 691 ~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~~~~~~~~~-h~~~V~~v~f~-~~~~l 767 (886)
.. +..+..++ |.++|..|+|+-+ |.+||++..|+.|++||+|..+. ..++.- ....|.++.|. .|.+|
T Consensus 377 ks-------~~~~a~Fpght~~vk~i~FsEN-GY~Lat~add~~V~lwDLRKl~n-~kt~~l~~~~~v~s~~fD~SGt~L 447 (506)
T KOG0289|consen 377 KS-------QTNVAKFPGHTGPVKAISFSEN-GYWLATAADDGSVKLWDLRKLKN-FKTIQLDEKKEVNSLSFDQSGTYL 447 (506)
T ss_pred CC-------ccccccCCCCCCceeEEEeccC-ceEEEEEecCCeEEEEEehhhcc-cceeeccccccceeEEEcCCCCeE
Confidence 98 44445554 5678999999988 99999999999999999998874 555543 33479999996 89999
Q ss_pred EEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEec
Q 002736 768 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 829 (886)
Q Consensus 768 ~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~ 829 (886)
+.++.|=+|.+++-.+..- ..+..+..|.+..++|.|....+++++||.|..++++-+
T Consensus 448 ~~~g~~l~Vy~~~k~~k~W----~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 448 GIAGSDLQVYICKKKTKSW----TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EeecceeEEEEEecccccc----eeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 9998877777776444322 457778889999999999999999999999999988854
No 484
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.91 E-value=1.3e-24 Score=232.67 Aligned_cols=199 Identities=15% Similarity=0.175 Sum_probs=142.8
Q ss_pred eeecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCC----CCCcChHHHHHHHHHHHHHHHhhcccCee
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~gii 104 (886)
..+.+.+|++++..++ .+. ....++++||| .+++|.++|... ...+++..++.++.||+.||.|||++||+
T Consensus 47 ~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~ 122 (269)
T cd05087 47 QPYRSLQHSNLLQCLG-QCT---EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFI 122 (269)
T ss_pred HHHHhCCCCCEeeEEE-EEc---CCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 4455667888888766 443 34568899999 789999999532 12456778889999999999999999999
Q ss_pred ecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccc
Q 002736 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (886)
Q Consensus 105 HrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 184 (886)
||||||+||+++.++++|++|||++.........
T Consensus 123 H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~---------------------------------------------- 156 (269)
T cd05087 123 HSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY---------------------------------------------- 156 (269)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCccee----------------------------------------------
Confidence 9999999999999999999999998532111000
Q ss_pred cccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCC-------CCCcccccch
Q 002736 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCASDIYR 257 (886)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~~sDIwS 257 (886)
.......++..|+|||++.+. .++.++||||
T Consensus 157 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws 194 (269)
T cd05087 157 ------------------------------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWS 194 (269)
T ss_pred ------------------------------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHH
Confidence 000112567789999998642 3588999999
Q ss_pred HHHHHHHHhc----CCCCCchhhHHhHhhccC---CCChh-hhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 258 lGvil~eLl~----pf~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
|||++|||++ ||................ ...+. .....+.+.+++..|+ .+|.+|||++|+++
T Consensus 195 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 195 LGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred HHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 9999999985 775444333222222211 11111 1234456778999998 68999999999975
No 485
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91 E-value=1e-24 Score=240.37 Aligned_cols=206 Identities=18% Similarity=0.221 Sum_probs=152.6
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP 110 (886)
.+....|++++..++ ++.. ....++++|||.+++|.++++. ..+++..+..++.||+.||.|||++||+||||||
T Consensus 62 ~l~~l~hpniv~~~~-~~~~--~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p 136 (328)
T cd07856 62 LLKHLRHENIISLSD-IFIS--PLEDIYFVTELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKP 136 (328)
T ss_pred HHHhcCCCCeeeEee-eEec--CCCcEEEEeehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 344567888888665 3322 2346789999988999998854 3578899999999999999999999999999999
Q ss_pred cceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccC
Q 002736 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (886)
Q Consensus 111 ~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 190 (886)
+||+++..+.++++|||.+......
T Consensus 137 ~Nili~~~~~~~l~dfg~~~~~~~~------------------------------------------------------- 161 (328)
T cd07856 137 SNILINENCDLKICDFGLARIQDPQ------------------------------------------------------- 161 (328)
T ss_pred HHEeECCCCCEEeCccccccccCCC-------------------------------------------------------
Confidence 9999999999999999988422100
Q ss_pred CccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCC-CCCCcccccchHHHHHHHHhc--
Q 002736 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIwSlGvil~eLl~-- 267 (886)
.....+++.|+|||.+.+ ..++.++|||||||++|||++
T Consensus 162 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~ 203 (328)
T cd07856 162 --------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203 (328)
T ss_pred --------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCC
Confidence 001256788999999876 458999999999999999999
Q ss_pred -CCCCCchhhHHh--------------H------------hhccC-CCCh--hhhccChhhHHHHHHccCCCCCCCCCHH
Q 002736 268 -PFSTGEEKTRTM--------------S------------SLRHR-VLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (886)
Q Consensus 268 -pf~~~~~~~~~~--------------~------------~~~~~-~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~ 317 (886)
||.......... . .+... ..+. ......+.+.++|.+||..+|.+||++.
T Consensus 204 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ 283 (328)
T cd07856 204 PLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAA 283 (328)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 564332211100 0 00000 0010 1123446788999999999999999999
Q ss_pred HHhcCCCCCCCcCchHH
Q 002736 318 ELLQSEFLNEPRDSMEE 334 (886)
Q Consensus 318 eil~h~~~~~~~~~~~e 334 (886)
+++.||||.....+..+
T Consensus 284 ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 284 EALAHPYLAPYHDPTDE 300 (328)
T ss_pred HHhcCCccccccCCccc
Confidence 99999999876655444
No 486
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=6.7e-24 Score=233.70 Aligned_cols=246 Identities=19% Similarity=0.277 Sum_probs=202.3
Q ss_pred CEEEEEEcC-CCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECC
Q 002736 570 LVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (886)
Q Consensus 570 ~V~sl~f~~-d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~ 648 (886)
.+..++|+. +.++|||++..|.|.+||+....... .....-.|...+.++.|++..+++|+||+.||+|++||++
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk----~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR 164 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNK----LLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLR 164 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccch----hhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeee
Confidence 455677876 67899999999999999998632211 1113345888999999999999999999999999999999
Q ss_pred CceEEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeeecCCCeEEEEEeCCCCcEEEEE
Q 002736 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIKTKANVCCVQFPLDSGRSLAFG 728 (886)
Q Consensus 649 t~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l~~g 728 (886)
..+....+.+....|.+|.|+|..+..|+++.+.|.+.+||+|.+.. ...+...|.+.|.|+.|+|+ +.+||+|
T Consensus 165 ~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r-----~~~k~~AH~GpV~c~nwhPn-r~~lATG 238 (839)
T KOG0269|consen 165 SKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR-----CEKKLTAHNGPVLCLNWHPN-REWLATG 238 (839)
T ss_pred cccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh-----HHHHhhcccCceEEEeecCC-Cceeeec
Confidence 99998899888899999999999999999999999999999998642 22233357889999999997 8999999
Q ss_pred eCCCeEEEEecCCCC-cceEEEecCCCCeEEEEec--CCCEEEEEEC--CCcEEEEeCCCCCccccCCCceEeecCCCce
Q 002736 729 SADHRIYYYDLRNSK-IPLCTLIGHNKTVSYVKFV--DATTLVSAST--DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 803 (886)
Q Consensus 729 s~Dg~I~vwDlr~~~-~~~~~~~~h~~~V~~v~f~--~~~~l~sgs~--Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v 803 (886)
+.|+.|+|||+...+ .++.++. -..+|.+|+|- ....|+|++. |-.|+|||++.+ .-|..++..|++.+
T Consensus 239 GRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP-----YIP~~t~~eH~~~v 312 (839)
T KOG0269|consen 239 GRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP-----YIPYATFLEHTDSV 312 (839)
T ss_pred CCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccc-----cccceeeeccCccc
Confidence 999999999998654 2344443 34689999994 5577888775 788999999976 47889999999999
Q ss_pred eEEEEecC-CCEEEEEcCCCcEEEEecCC
Q 002736 804 NFVGLSVW-DGYVATGSETNEVFVYHKAF 831 (886)
Q Consensus 804 ~~v~~sp~-g~~lasgs~Dg~v~iwd~~~ 831 (886)
+.++|... -..+.++|.|++|..--+..
T Consensus 313 t~i~W~~~d~~~l~s~sKD~tv~qh~~kn 341 (839)
T KOG0269|consen 313 TGIAWDSGDRINLWSCSKDGTVLQHLFKN 341 (839)
T ss_pred cceeccCCCceeeEeecCccHHHHhhhhc
Confidence 99999763 34788999999887665544
No 487
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-26 Score=227.03 Aligned_cols=224 Identities=17% Similarity=0.170 Sum_probs=168.3
Q ss_pred cccccccCCCCCcccccccCceeecccccccCCCCCCccccccccCCceEEEEeeCCcchhhhhcC----CCCCcChHHH
Q 002736 9 ERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYEC 84 (886)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~g~sL~~~l~~----~~~~l~~~~~ 84 (886)
+|+...-+....-+|+.|.+.+..+ .+-++++.+|| ++.. ++..+|.||+...||..+-+. ....+++...
T Consensus 95 KrIr~~n~~keq~rll~e~d~~mks-~~cp~IVkfyG-a~F~---EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Il 169 (361)
T KOG1006|consen 95 KRIRSNNIEKEQKRLLMEHDTVMKS-SNCPNIVKFYG-ALFS---EGDCWICMELMDISLDKLYKRVYSVQKSRIPENIL 169 (361)
T ss_pred EEeeeccchHHHHHHHHHHHHHHhh-cCCcHHHHHhh-hhhc---CCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhh
Confidence 4444444433344556665554444 47788888888 6654 466788999999998876532 3457899999
Q ss_pred HHHHHHHHHHHHhhcc-cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhh
Q 002736 85 LHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (886)
Q Consensus 85 ~~i~~qi~~~l~~lHs-~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (886)
-+|..-.++||+||-. ..|||||+||+||||+..|.||+||||+|-.+...
T Consensus 170 g~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S---------------------------- 221 (361)
T KOG1006|consen 170 GHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS---------------------------- 221 (361)
T ss_pred hheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH----------------------------
Confidence 9999999999999976 58999999999999999999999999999443111
Q ss_pred hcccccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccc
Q 002736 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (886)
Q Consensus 164 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (886)
...+.-.|-..|||||-
T Consensus 222 ---------------------------------------------------------------iAkT~daGCrpYmAPER 238 (361)
T KOG1006|consen 222 ---------------------------------------------------------------IAKTVDAGCRPYMAPER 238 (361)
T ss_pred ---------------------------------------------------------------HHhhhccCCccccChhc
Confidence 01122267888999999
Q ss_pred cCC--CCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCChhh-----hccChhhHHHHHHccCCCCCCC
Q 002736 244 LAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 244 ~~~--~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R 313 (886)
+.. ..|+-+||+||||++|||+.| |+..+.........+..+..|... ...+..+..||.-||.+|-+.|
T Consensus 239 i~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~R 318 (361)
T KOG1006|consen 239 IDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDR 318 (361)
T ss_pred cCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccC
Confidence 964 349999999999999999999 777666655555555444443222 2245678899999999999999
Q ss_pred CCHHHHhcCCCCCCC
Q 002736 314 PKMGELLQSEFLNEP 328 (886)
Q Consensus 314 ps~~eil~h~~~~~~ 328 (886)
|+..+++.+||+...
T Consensus 319 pky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 319 PKYDDLKKFPFYRMY 333 (361)
T ss_pred cchhhhhcCchhhhh
Confidence 999999999998753
No 488
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.91 E-value=5.7e-25 Score=211.07 Aligned_cols=196 Identities=15% Similarity=0.238 Sum_probs=149.6
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
.++|++.++. +-.|..... .-+++|| ...+.+.+- ..++..+++.++.||+.||+|+||+||+|||+||.|+|
T Consensus 91 gg~NIi~L~D-iV~Dp~Skt-paLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvm 164 (338)
T KOG0668|consen 91 GGPNIIKLLD-IVKDPESKT-PSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVM 164 (338)
T ss_pred CCCCeeehhh-hhcCccccC-chhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceee
Confidence 5899999998 555544333 3455666 888887765 45788999999999999999999999999999999999
Q ss_pred eccC-CceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCcc
Q 002736 115 MSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (886)
Q Consensus 115 l~~~-~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (886)
|+.. ..+++||+|+|.......
T Consensus 165 Idh~~rkLrlIDWGLAEFYHp~~--------------------------------------------------------- 187 (338)
T KOG0668|consen 165 IDHELRKLRLIDWGLAEFYHPGK--------------------------------------------------------- 187 (338)
T ss_pred echhhceeeeeecchHhhcCCCc---------------------------------------------------------
Confidence 9954 569999999995442110
Q ss_pred CcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC-CCcccccchHHHHHHHHhc---CC
Q 002736 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PF 269 (886)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDIwSlGvil~eLl~---pf 269 (886)
.....+.+.+|--||.+..-+ |+.+-|+|||||+|.+|+. ||
T Consensus 188 ----------------------------------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepF 233 (338)
T KOG0668|consen 188 ----------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233 (338)
T ss_pred ----------------------------------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcc
Confidence 112236688899999998754 9999999999999999998 99
Q ss_pred CCCchhhHHhHhhcc---------------CCCChh---------------------hhccChhhHHHHHHccCCCCCCC
Q 002736 270 STGEEKTRTMSSLRH---------------RVLPPQ---------------------LLLKFPKEASFCLWLLHPEPSGR 313 (886)
Q Consensus 270 ~~~~~~~~~~~~~~~---------------~~~~~~---------------------~~~~~~~~~~li~~~L~~dP~~R 313 (886)
+.+.......-.+.. -.++|. ..-..|++.+|+.++|.+|..+|
T Consensus 234 FhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeR 313 (338)
T KOG0668|consen 234 FHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQER 313 (338)
T ss_pred cCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccc
Confidence 887665544322110 011111 11135788899999999999999
Q ss_pred CCHHHHhcCCCCCCC
Q 002736 314 PKMGELLQSEFLNEP 328 (886)
Q Consensus 314 ps~~eil~h~~~~~~ 328 (886)
+||.|++.||||...
T Consensus 314 lTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 314 LTAKEAMAHPYFAPV 328 (338)
T ss_pred cchHHHhcCchHHHH
Confidence 999999999999753
No 489
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=1.4e-22 Score=201.75 Aligned_cols=262 Identities=15% Similarity=0.275 Sum_probs=199.0
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEEe-CCCCCeEEEecCCCcEE
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN-SYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 565 ~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~~-~~~~~~las~s~Dg~V~ 643 (886)
.+|.+-|.++.|++.|+.+|||+.|.+++|||+... ..........-.|.+.|..|.|. |.-|+.+|++++|++|.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~---s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSD---SGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCC---CCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence 468999999999999999999999999999998542 23334445566799999999995 44588999999999999
Q ss_pred EEECCC---------ceEEEEecccCCcEEEEEEccC-CCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee------
Q 002736 644 VWDVSR---------SQVLTEMREHERRVWSIDFSSA-DPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK------ 707 (886)
Q Consensus 644 iWd~~t---------~~~~~~~~~h~~~v~~v~~~p~-~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~------ 707 (886)
||.-.. -.....+......|++|+|.|. -|-.||+++.||.++||+.-....... -.....+.
T Consensus 87 iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~-W~Lq~Ei~~~~~pp 165 (361)
T KOG2445|consen 87 IWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQ-WTLQHEIQNVIDPP 165 (361)
T ss_pred eeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcccccc-chhhhhhhhccCCc
Confidence 997521 1234556677889999999984 356899999999999998755321111 11111111
Q ss_pred --cCCCeEEEEEeCCC--CcEEEEEeCC-----CeEEEEecCCCC---cceEEEecCCCCeEEEEec-----CCCEEEEE
Q 002736 708 --TKANVCCVQFPLDS--GRSLAFGSAD-----HRIYYYDLRNSK---IPLCTLIGHNKTVSYVKFV-----DATTLVSA 770 (886)
Q Consensus 708 --~~~~v~~v~~sp~~--~~~l~~gs~D-----g~I~vwDlr~~~---~~~~~~~~h~~~V~~v~f~-----~~~~l~sg 770 (886)
.+....||.|+|.. ..+||.|+.+ +.++||...... ..+..+.+|..+|+.|+|. .-..||+|
T Consensus 166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA 245 (361)
T KOG2445|consen 166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVA 245 (361)
T ss_pred ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEe
Confidence 34567899999752 4578888866 478888765433 1355678999999999995 44689999
Q ss_pred ECCCcEEEEeCCCCCcc--------------ccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCC
Q 002736 771 STDNTLKLWDLSMCTSR--------------VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 831 (886)
Q Consensus 771 s~Dg~i~lwd~~~~~~~--------------~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~ 831 (886)
+.|| |+||.+...... ..-+.+..+.+|.++|+.|.|+-.|..|++.|.||.|++|....
T Consensus 246 ~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany 319 (361)
T KOG2445|consen 246 TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY 319 (361)
T ss_pred ecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence 9999 999999842210 01123556889999999999999999999999999999998654
No 490
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.91 E-value=2.8e-24 Score=230.03 Aligned_cols=192 Identities=16% Similarity=0.240 Sum_probs=147.9
Q ss_pred ccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhc---CCCCCcChHHHHHHHHHHHHHHHhhcc-cCeeeccc
Q 002736 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNV 108 (886)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giiHrDl 108 (886)
..+|++++..++ .+. ..+.++++||| .|++|.+++. .....+++..++.++.||+.||.|||+ .||+|+||
T Consensus 65 ~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl 140 (269)
T cd08528 65 QLRHPNIVRYYK-TFL---ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDL 140 (269)
T ss_pred cCCCCCeeeEEe-eEc---cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCC
Confidence 367888887776 333 34678999999 7889998873 334568999999999999999999996 78999999
Q ss_pred CCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 109 kP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||+||+++.++.++++|||.+.......
T Consensus 141 ~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------------- 168 (269)
T cd08528 141 TPNNIMLGEDDKVTITDFGLAKQKQPES---------------------------------------------------- 168 (269)
T ss_pred CHHHEEECCCCcEEEecccceeeccccc----------------------------------------------------
Confidence 9999999999999999999985431110
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc-
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~- 267 (886)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 169 ---------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g 209 (269)
T cd08528 169 ---------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL 209 (269)
T ss_pred ---------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC
Confidence 0011256888999999998889999999999999999998
Q ss_pred --CCCCCchhhHHhHhhccCCCChhh-hccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 --PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||........ ...+......+.. ....+.+.+++.+||..||.+||++.|+..
T Consensus 210 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 210 QPPFYSTNMLSL-ATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred CCcccccCHHHH-HHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 6654433322 2233333332222 245678889999999999999999999865
No 491
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=2.3e-24 Score=233.19 Aligned_cols=200 Identities=19% Similarity=0.208 Sum_probs=148.7
Q ss_pred ccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCccee
Q 002736 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (886)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIl 114 (886)
+|++++...+.+ .....++++||| .|++|.+++.+. ..+++.+++.++.||+.+|.|||+.|++||||||+||+
T Consensus 63 ~~~~i~~~~~~~----~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil 137 (288)
T cd05583 63 RCPFLVTLHYAF----QTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENIL 137 (288)
T ss_pred CCcchhhhheee----ecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 577777766522 234568899999 788999999654 56899999999999999999999999999999999999
Q ss_pred eccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccC
Q 002736 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (886)
Q Consensus 115 l~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (886)
++.++.++++|||++.........
T Consensus 138 ~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------------- 161 (288)
T cd05583 138 LDSEGHVVLTDFGLSKEFLAEEEE-------------------------------------------------------- 161 (288)
T ss_pred ECCCCCEEEEECcccccccccccc--------------------------------------------------------
Confidence 999999999999988543211000
Q ss_pred cccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCC--CCcccccchHHHHHHHHhc---CC
Q 002736 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC---PF 269 (886)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDIwSlGvil~eLl~---pf 269 (886)
......|+..|+|||.+.+.. .+.++||||||+++|||++ ||
T Consensus 162 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~ 208 (288)
T cd05583 162 ---------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPF 208 (288)
T ss_pred ---------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCc
Confidence 000125788899999987755 7889999999999999999 66
Q ss_pred CCCchh---hHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCC---HHHHhcCCCCCCCcC
Q 002736 270 STGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPRD 330 (886)
Q Consensus 270 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~eil~h~~~~~~~~ 330 (886)
...... ......+.. ..++......+.+.+++.+||..+|++||| +.++|+||||+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 209 TVDGEQNSQSEISRRILK-SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred ccCcccchHHHHHHHHHc-cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 432211 111111111 122333345577889999999999999998 467799999987643
No 492
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=7.1e-25 Score=218.77 Aligned_cols=158 Identities=18% Similarity=0.213 Sum_probs=123.2
Q ss_pred cchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccCCceeeeeCCccCCCCCCcccccccccc
Q 002736 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 145 (886)
Q Consensus 66 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~ 145 (886)
|+|.++|.+.+..+++.+++.|++||+.||.|||++| ||+|||++.++.+|+ ||++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999766677999999999999999999999999 999999999999998 9987432110
Q ss_pred ccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCcccccccccccccccccccCCCC
Q 002736 146 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 225 (886)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 225 (886)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCchhhHHhHhhccCCCCh------hhhccCh
Q 002736 226 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP------QLLLKFP 296 (886)
Q Consensus 226 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 296 (886)
...||+.|+|||++.+..|+.++|||||||++|||++ ||............+.....+. .......
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0156899999999999999999999999999999998 7754433333222222211111 1111122
Q ss_pred --hhHHHHHHccCCCCCCCCCHHHHhcCCCCC
Q 002736 297 --KEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (886)
Q Consensus 297 --~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 326 (886)
.+.+++.+||..+|.+||++.|+++|+|+.
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 578999999999999999999999998764
No 493
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.91 E-value=4.1e-24 Score=229.25 Aligned_cols=202 Identities=14% Similarity=0.095 Sum_probs=146.7
Q ss_pred eeecccccccCCCCCCccccccccC---CceEEEEee-CCcchhhhhcC-----CCCCcChHHHHHHHHHHHHHHHhhcc
Q 002736 30 VELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (886)
..+...+|++++..++ ++...... ...+++++| .+++|.+++.. ....++...++.++.||+.||.|||+
T Consensus 53 ~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~ 131 (273)
T cd05074 53 ACMKEFDHPNVIKLIG-VSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS 131 (273)
T ss_pred HHHhcCCCCCcceEEE-EEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3455667888888776 44433222 234677777 78899888632 22357899999999999999999999
Q ss_pred cCeeecccCCcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCc
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 180 (886)
.||+||||||+||+++.++.+|++|||+++.........
T Consensus 132 ~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------- 170 (273)
T cd05074 132 KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYR----------------------------------------- 170 (273)
T ss_pred CCEeecccchhhEEEcCCCCEEECcccccccccCCccee-----------------------------------------
Confidence 999999999999999999999999999986432110000
Q ss_pred cccccccccCCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHH
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGv 260 (886)
......+++.|++||.+.+..++.++|||||||
T Consensus 171 -----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~ 203 (273)
T cd05074 171 -----------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWAFGV 203 (273)
T ss_pred -----------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHHHHH
Confidence 000013356699999998888999999999999
Q ss_pred HHHHHhc----CCCCCchhhHHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 261 il~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
++|||++ ||.. .........+............++.+.+++.+||..+|.+||++.++++
T Consensus 204 il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 204 TMWEIMTRGQTPYAG-VENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHhhCCCCCCCC-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999997 4533 3333333333322222222345678889999999999999999999986
No 494
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=5.3e-25 Score=233.61 Aligned_cols=183 Identities=17% Similarity=0.275 Sum_probs=140.9
Q ss_pred cCCceEEEEeeCCcchhhhhcCCCC--CcChHHHHHHHHHHHHHHHhhcccCeeecccCCcceeeccC-CceeeeeCCcc
Q 002736 53 AIDPFVHAIEWGDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASC 129 (886)
Q Consensus 53 ~~~~~~i~~e~~g~sL~~~l~~~~~--~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlkP~NIll~~~-~~vki~dfg~~ 129 (886)
..+++|+|+|....+|++.|++-+. .|....++.|+.|++.||..|-..||+|.||||.|||+++. +.+||||||.|
T Consensus 505 hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 505 HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 5678999999999999999977543 46889999999999999999999999999999999999854 56899999999
Q ss_pred CCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccccCCccCcccccccCccccccc
Q 002736 130 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 209 (886)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (886)
...+..++
T Consensus 585 ~~~~enei------------------------------------------------------------------------ 592 (752)
T KOG0670|consen 585 SFASENEI------------------------------------------------------------------------ 592 (752)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 66543322
Q ss_pred ccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc---CCCCCc--hhhHHhHhhcc
Q 002736 210 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE--EKTRTMSSLRH 284 (886)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~---pf~~~~--~~~~~~~~~~~ 284 (886)
+.++-+..|+|||++.|.+|++..|+||+||.||||.| -|.+.. .....+..+..
T Consensus 593 --------------------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 593 --------------------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred --------------------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 22455778999999999999999999999999999999 332222 11112222211
Q ss_pred CC-----------------------------------------CC---------------hhhhccChhhHHHHHHccCC
Q 002736 285 RV-----------------------------------------LP---------------PQLLLKFPKEASFCLWLLHP 308 (886)
Q Consensus 285 ~~-----------------------------------------~~---------------~~~~~~~~~~~~li~~~L~~ 308 (886)
.+ .| .........+.+|+.+||..
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 00 00 00011112346999999999
Q ss_pred CCCCCCCHHHHhcCCCCCC
Q 002736 309 EPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 309 dP~~Rps~~eil~h~~~~~ 327 (886)
||++|.|..|+|+||||.+
T Consensus 733 dP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 733 DPEKRITVNQALKHPFITE 751 (752)
T ss_pred ChhhcCCHHHHhcCCcccC
Confidence 9999999999999999975
No 495
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-24 Score=224.40 Aligned_cols=205 Identities=18% Similarity=0.239 Sum_probs=157.7
Q ss_pred cccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhccc--CeeecccCCc
Q 002736 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIVVHNVRPS 111 (886)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~--giiHrDlkP~ 111 (886)
.+|+++|.+|.-+. ...+.||.|.|| .|.+|.-||+.+ +.+++.+++.|+.||+.||.||... -|||-||||.
T Consensus 524 LDHpRIVKlYDyfs---lDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPg 599 (775)
T KOG1151|consen 524 LDHPRIVKLYDYFS---LDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPG 599 (775)
T ss_pred cCcceeeeeeeeee---eccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCc
Confidence 57888888888333 357889999999 778888888655 7889999999999999999999976 5999999999
Q ss_pred ceeec---cCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCccccccccc
Q 002736 112 CFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (886)
Q Consensus 112 NIll~---~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 188 (886)
||||. ..|.+||+|||+++....++.+...
T Consensus 600 NILLv~GtacGeIKITDFGLSKIMdddSy~~vd----------------------------------------------- 632 (775)
T KOG1151|consen 600 NILLVNGTACGEIKITDFGLSKIMDDDSYNSVD----------------------------------------------- 632 (775)
T ss_pred cEEEecCcccceeEeeecchhhhccCCccCccc-----------------------------------------------
Confidence 99994 5688999999999876555332100
Q ss_pred cCCccCcccccccCcccccccccccccccccccCCCCCcee-eeeccccceecccccCCC----CCCcccccchHHHHHH
Q 002736 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQ-ILLMETNWYASPEELAGA----PVSCASDIYRLGVLLF 263 (886)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~gt~~Y~aPE~~~~~----~~s~~sDIwSlGvil~ 263 (886)
.+.. .-..||.||++||++.-. +.+.++||||+|||+|
T Consensus 633 -------------------------------------GmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFy 675 (775)
T KOG1151|consen 633 -------------------------------------GMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFY 675 (775)
T ss_pred -------------------------------------ceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhh
Confidence 0011 113799999999998643 2799999999999999
Q ss_pred HHhc---CCCCCchhhHHhH---hhcc-CCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhcCCCCCC
Q 002736 264 ELFC---PFSTGEEKTRTMS---SLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (886)
Q Consensus 264 eLl~---pf~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 327 (886)
..+. ||........... ++.. .+-.|.-+..++++.+||.+||.+--++|....++..||||..
T Consensus 676 QClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 676 QCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 9988 8865544333221 1111 1112333456788999999999999999999999999999874
No 496
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.91 E-value=3.5e-24 Score=231.15 Aligned_cols=202 Identities=20% Similarity=0.209 Sum_probs=148.9
Q ss_pred eecccccccCCCCCCccccccccCCceEEEEee-CCcchhhhhcCCCCCcChHHHHHHHHHHHHHHHhhcccCeeecccC
Q 002736 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (886)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giiHrDlk 109 (886)
.+....|++++..++ ++.+. ....++++||| .+++|.+++.+....+++..+..++.||+.||.|||++||+|+|||
T Consensus 59 ~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 136 (284)
T cd05038 59 ILRTLDHENIVKYKG-VCEKP-GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLA 136 (284)
T ss_pred HHHhCCCCChheEEe-eeecC-CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 345567888877665 55432 34567889998 6899999997655578999999999999999999999999999999
Q ss_pred CcceeeccCCceeeeeCCccCCCCCCccccccccccccccCCCCCCCchhhhhhhcccccccccccCCCCcccccccccc
Q 002736 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (886)
Q Consensus 110 P~NIll~~~~~vki~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 189 (886)
|+||+++.++.++++|||.+...........
T Consensus 137 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------- 167 (284)
T cd05038 137 ARNILVESEDLVKISDFGLAKVLPEDKDYYY------------------------------------------------- 167 (284)
T ss_pred HHhEEEcCCCCEEEcccccccccccCCccee-------------------------------------------------
Confidence 9999999999999999999865431100000
Q ss_pred CCccCcccccccCcccccccccccccccccccCCCCCceeeeeccccceecccccCCCCCCcccccchHHHHHHHHhc--
Q 002736 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (886)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIwSlGvil~eLl~-- 267 (886)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 168 --------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~ 209 (284)
T cd05038 168 --------------------------------------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYG 209 (284)
T ss_pred --------------------------------------ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccC
Confidence 0000133556999999988889999999999999999998
Q ss_pred -CCCCCchhh--------------HHhHhhccCCCChhhhccChhhHHHHHHccCCCCCCCCCHHHHhc
Q 002736 268 -PFSTGEEKT--------------RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (886)
Q Consensus 268 -pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 321 (886)
||....... .....+......+........+.+++.+||.++|.+||++.|+++
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 210 DPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred CCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 554322211 111111222222223344567889999999999999999999976
No 497
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=6.3e-22 Score=197.73 Aligned_cols=266 Identities=15% Similarity=0.238 Sum_probs=199.9
Q ss_pred EEEEeCCCcEEEEEcCcccCccccccc----c-eEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEec
Q 002736 583 FAAAGVNKKIKVFECDAIINENRDIHY----P-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (886)
Q Consensus 583 lat~~~d~~Ikiwd~~~~~~~~~~~~~----~-~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~ 657 (886)
|++|++...|.=|++.-......+... | ....+|.+.|++++.+ +.++|||+.|-+|+|||+++......+-
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs---~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS---GPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec---ceeEeccCCCCcEEEEeccchhhhccee
Confidence 566777766666666543211111111 1 2234699999999986 6799999999999999999999988888
Q ss_pred ccCCcEEEEEEccCCC--CEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCCcEEEEEeCCCeE
Q 002736 658 EHERRVWSIDFSSADP--TLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRI 734 (886)
Q Consensus 658 ~h~~~v~~v~~~p~~~--~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~~~l~~gs~Dg~I 734 (886)
.|.+.|+++.|.+ .- ++|++|++||.|.+|+... ...+.+++ |.+.|+.++.+|. +++.++.+.|+.+
T Consensus 81 ~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~~~~-------W~~~~slK~H~~~Vt~lsiHPS-~KLALsVg~D~~l 151 (362)
T KOG0294|consen 81 SHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWRVGS-------WELLKSLKAHKGQVTDLSIHPS-GKLALSVGGDQVL 151 (362)
T ss_pred ccccceEEEEecC-CcchhheeeecCCCcEEEEEcCC-------eEEeeeecccccccceeEecCC-CceEEEEcCCcee
Confidence 9999999999986 43 3999999999999999988 66666666 4567999999999 8999999999999
Q ss_pred EEEecCCCCcceEEEecCCCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCC
Q 002736 735 YYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG 813 (886)
Q Consensus 735 ~vwDlr~~~~~~~~~~~h~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~ 813 (886)
+.||+-+++.....--.|. .+.|.|+ .|.+++.++.+ .|-+|-+.+... ...+. ....+.++-|- ++.
T Consensus 152 r~WNLV~Gr~a~v~~L~~~--at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v------~~~i~-~~~r~l~~~~l-~~~ 220 (362)
T KOG0294|consen 152 RTWNLVRGRVAFVLNLKNK--ATLVSWSPQGDHFVVSGRN-KIDIYQLDNASV------FREIE-NPKRILCATFL-DGS 220 (362)
T ss_pred eeehhhcCccceeeccCCc--ceeeEEcCCCCEEEEEecc-EEEEEecccHhH------hhhhh-ccccceeeeec-CCc
Confidence 9999988875222222333 3449997 78888877764 688998876531 11111 11224444442 567
Q ss_pred EEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEE--ccCCCcEEEEEeCCCCEEEEEe
Q 002736 814 YVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW--RGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 814 ~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~--s~~~~~~l~s~~~dg~I~iw~l 885 (886)
++++|++|+.|.+||.....++..+ .+|...|-++.+ .|++. +|+|+++||.|+||++
T Consensus 221 ~L~vG~d~~~i~~~D~ds~~~~~~~-------------~AH~~RVK~i~~~~~~~~~-~lvTaSSDG~I~vWd~ 280 (362)
T KOG0294|consen 221 ELLVGGDNEWISLKDTDSDTPLTEF-------------LAHENRVKDIASYTNPEHE-YLVTASSDGFIKVWDI 280 (362)
T ss_pred eEEEecCCceEEEeccCCCccceee-------------ecchhheeeeEEEecCCce-EEEEeccCceEEEEEc
Confidence 9999999999999999987666443 456777888884 56677 9999999999999996
No 498
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=2.6e-23 Score=224.93 Aligned_cols=243 Identities=18% Similarity=0.338 Sum_probs=201.9
Q ss_pred CCCCee---eEEEeCCCCCeEEEecCCCcEEEEECCCce------EEEEecccCCcEEEEEEccCCCCEEEEEeCCCcEE
Q 002736 616 SRSKLS---SICWNSYIKSQIASSNFEGVVQVWDVSRSQ------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (886)
Q Consensus 616 ~~~~I~---~l~~~~~~~~~las~s~Dg~V~iWd~~t~~------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~ 686 (886)
+...|. .+..+...+++|+||+.||.|++|++.... ....++.|.+.|+++...- +++.|++||.|-+|+
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~-~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCG-NGKTLISASSDTTVK 98 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhc-CCCceEEecCCceEE
Confidence 444555 444555567899999999999999986432 3667888999999999885 888999999999999
Q ss_pred EEeCchhhhhhccCceeeeee-cCCCeEEEEE-eCCCCcEEEEEeCCCeEEEEecCCCC---------cceEEEe-cCCC
Q 002736 687 LWSINQAILLLHLGVSIGTIK-TKANVCCVQF-PLDSGRSLAFGSADHRIYYYDLRNSK---------IPLCTLI-GHNK 754 (886)
Q Consensus 687 lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~-sp~~~~~l~~gs~Dg~I~vwDlr~~~---------~~~~~~~-~h~~ 754 (886)
+|+..... ..+..++. |...|.|+++ -++ ..++|+|+-|+.|.+||+.++. .+...+. |+..
T Consensus 99 ~W~~~~~~-----~~c~stir~H~DYVkcla~~ak~-~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~ 172 (735)
T KOG0308|consen 99 VWNAHKDN-----TFCMSTIRTHKDYVKCLAYIAKN-NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKD 172 (735)
T ss_pred EeecccCc-----chhHhhhhcccchheeeeecccC-ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcc
Confidence 99998732 13444444 5677999999 555 7899999999999999998652 2233444 8999
Q ss_pred CeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCC
Q 002736 755 TVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 833 (886)
Q Consensus 755 ~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~ 833 (886)
.|++++.. .+..|++|+..+.|++||.+++. .+..++||+..|..+-.++||..++++|.||+|++||+.-..
T Consensus 173 siYSLA~N~t~t~ivsGgtek~lr~wDprt~~------kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQr 246 (735)
T KOG0308|consen 173 SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCK------KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQR 246 (735)
T ss_pred ceeeeecCCcceEEEecCcccceEEecccccc------ceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccc
Confidence 99999996 77899999999999999999984 377889999999999999999999999999999999999988
Q ss_pred cceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 834 PALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
++.++.. |...|+++.-+|+-. .+.+|+.||.|..=+|
T Consensus 247 Cl~T~~v-------------H~e~VWaL~~~~sf~-~vYsG~rd~~i~~Tdl 284 (735)
T KOG0308|consen 247 CLATYIV-------------HKEGVWALQSSPSFT-HVYSGGRDGNIYRTDL 284 (735)
T ss_pred eeeeEEe-------------ccCceEEEeeCCCcc-eEEecCCCCcEEeccc
Confidence 8877643 455699999999988 9999999999987554
No 499
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=8.3e-22 Score=196.60 Aligned_cols=310 Identities=17% Similarity=0.224 Sum_probs=220.5
Q ss_pred EEeeecCceEEEEeccCcccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCcccCcccccccceEEecCCCCeeeEEE
Q 002736 546 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW 625 (886)
Q Consensus 546 ~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d~~~lat~~~d~~Ikiwd~~~~~~~~~~~~~~~~~~~~~~~I~~l~~ 625 (886)
.-|+........-|....+.+|...|++++|+.||++|||++.|+.|+||++.+-.... |..+.....-+..+.+.|
T Consensus 64 ~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~e---Hr~~R~nve~dhpT~V~F 140 (420)
T KOG2096|consen 64 DQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKE---HRCIRQNVEYDHPTRVVF 140 (420)
T ss_pred hhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhh---hhHhhccccCCCceEEEE
Confidence 33444444444444445567899999999999999999999999999999998632211 111111112235678999
Q ss_pred eCCCCCeEEEecCCCcEEEEECCCce---EE--------EEe-cccCCcEEEEEEccCCCCEEEEEeCCCcEEEEeCchh
Q 002736 626 NSYIKSQIASSNFEGVVQVWDVSRSQ---VL--------TEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (886)
Q Consensus 626 ~~~~~~~las~s~Dg~V~iWd~~t~~---~~--------~~~-~~h~~~v~~v~~~p~~~~~l~sgs~Dg~v~lwd~~~~ 693 (886)
.|+....++++-...++++|.+...+ .. ..| +.|...+.++-..- ++.++++++.|..|.||+++
T Consensus 141 apDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-- 217 (420)
T KOG2096|consen 141 APDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-- 217 (420)
T ss_pred CCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC--
Confidence 99888889988888899999874322 11 011 23666677777663 77899999999999999998
Q ss_pred hhhhccCceeeeeecC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEecCCCC-------cceEEEecCCCCeEEEEec-CC
Q 002736 694 ILLLHLGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-------IPLCTLIGHNKTVSYVKFV-DA 764 (886)
Q Consensus 694 ~~~~~~~~~~~~~~~~-~~v~~v~~sp~~~~~l~~gs~Dg~I~vwDlr~~~-------~~~~~~~~h~~~V~~v~f~-~~ 764 (886)
++.+.++... ......+.+|+ |+++++++.---|++|.+--.+ ..+..+.||..+|...+|+ +.
T Consensus 218 ------Gq~L~~idtnq~~n~~aavSP~-GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S 290 (420)
T KOG2096|consen 218 ------GQLLQSIDTNQSSNYDAAVSPD-GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSS 290 (420)
T ss_pred ------CceeeeeccccccccceeeCCC-CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCc
Confidence 4555555543 34677889999 9999999998889999863221 2366789999999999998 88
Q ss_pred CEEEEEECCCcEEEEeCCCCCccc-cCCCceEe----ecCCCceeEEEEecCCCEEEEEcCCCcEEEEecCCCCcceeec
Q 002736 765 TTLVSASTDNTLKLWDLSMCTSRV-IDTPLHSF----TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFN 839 (886)
Q Consensus 765 ~~l~sgs~Dg~i~lwd~~~~~~~~-~~~~~~~~----~~h~~~v~~v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~ 839 (886)
..++|.|.||+++|||+.-.-... ....+++. ..-.+.-.-++++|.|+.||... ...+.+|....++..-.+.
T Consensus 291 ~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e 369 (420)
T KOG2096|consen 291 TRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELE 369 (420)
T ss_pred ceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHH
Confidence 899999999999999986421100 00112222 11122233789999999888765 3568999888776543222
Q ss_pred cCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEE
Q 002736 840 FNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 883 (886)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw 883 (886)
+-|..-|++++|+++|. +++|++ |..++++
T Consensus 370 ------------~~h~~~Is~is~~~~g~-~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 370 ------------DIHSTTISSISYSSDGK-YIATCG-DRYVRVI 399 (420)
T ss_pred ------------HhhcCceeeEEecCCCc-EEeeec-ceeeeee
Confidence 45677899999999999 777765 5566665
No 500
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=1.9e-22 Score=219.04 Aligned_cols=316 Identities=16% Similarity=0.202 Sum_probs=241.2
Q ss_pred ccccceEEeeecCceEEEEeccCcccCCCCCEEEEEEcCC-----------CCEEEEEeCCCcEEEEEcCcccCccc---
Q 002736 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-----------GELFAAAGVNKKIKVFECDAIINENR--- 605 (886)
Q Consensus 540 ~~d~~~~~w~~~~~~~~~~l~~~~~~~h~~~V~sl~f~~d-----------~~~lat~~~d~~Ikiwd~~~~~~~~~--- 605 (886)
.-|..+.+||+.....+... ...+.|+.-|.++.--|. ...|.|++.|++|++|+++.......
T Consensus 343 YndhSlYvWDvrD~~kvgk~--~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrR 420 (1080)
T KOG1408|consen 343 YNDHSLYVWDVRDVNKVGKC--SSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRR 420 (1080)
T ss_pred EcCceEEEEeccccccccce--eeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeec
Confidence 34778999998765433322 334668888888877662 23589999999999999876211110
Q ss_pred -------------cc--------ccc------eEEecCCCCeeeEEEeCCCCCeEEEecCCCcEEEEECCCceEEEEecc
Q 002736 606 -------------DI--------HYP------VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE 658 (886)
Q Consensus 606 -------------~~--------~~~------~~~~~~~~~I~~l~~~~~~~~~las~s~Dg~V~iWd~~t~~~~~~~~~ 658 (886)
+. ..+ ......+-.+.+|+.+| ++++||+|+.-|+++|||+.....+..++.
T Consensus 421 Nils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eA 499 (1080)
T KOG1408|consen 421 NILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQHLASGDRGGNLRVYDLQELEYTCFMEA 499 (1080)
T ss_pred ccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-CcceecccCccCceEEEEehhhhhhhheec
Confidence 00 000 11223566799999999 799999999999999999999998889999
Q ss_pred cCCcEEEEEEccC--CCCEEEEEeCCCcEEEEeCchhhhhhccCceeeeee-cCCCeEEEEEeCCCC-cEEEEEeCCCeE
Q 002736 659 HERRVWSIDFSSA--DPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSG-RSLAFGSADHRI 734 (886)
Q Consensus 659 h~~~v~~v~~~p~--~~~~l~sgs~Dg~v~lwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~~~-~~l~~gs~Dg~I 734 (886)
|+..|.|+.|+-. ...+||+++.|.-|+|+|+... -..++++. |.+.|++|.|--.+. ..++++++|..|
T Consensus 500 HesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn------y~l~qtld~HSssITsvKFa~~gln~~MiscGADksi 573 (1080)
T KOG1408|consen 500 HESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN------YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSI 573 (1080)
T ss_pred ccceeEEEeecCchhhhHhhhhccCCceEEEEecccc------cchhhhhcccccceeEEEEeecCCceEEEeccCchhh
Confidence 9999999999831 2468999999999999999764 23344554 467899999987732 568889999987
Q ss_pred EEEecCCCCcceEEEecC-----CCCeEEEEec-CCCEEEEEECCCcEEEEeCCCCCccccCCCceEeec---CCCceeE
Q 002736 735 YYYDLRNSKIPLCTLIGH-----NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG---HTNVKNF 805 (886)
Q Consensus 735 ~vwDlr~~~~~~~~~~~h-----~~~V~~v~f~-~~~~l~sgs~Dg~i~lwd~~~~~~~~~~~~~~~~~~---h~~~v~~ 805 (886)
.+--.+... ....+..| ...++.++.- +..++++++.|..|+|||+.+++ .+++|+| |.+...-
T Consensus 574 mFr~~qk~~-~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgK------q~k~FKgs~~~eG~lIK 646 (1080)
T KOG1408|consen 574 MFRVNQKAS-SGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGK------QVKSFKGSRDHEGDLIK 646 (1080)
T ss_pred heehhcccc-CceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccc------eeeeecccccCCCceEE
Confidence 643333222 12333333 2456777773 78899999999999999999985 3677765 5566777
Q ss_pred EEEecCCCEEEEEcCCCcEEEEecCCCCcceeeccCCCCCCCCCccccCCCcEEEEEEccCCCcEEEEEeCCCCEEEEEe
Q 002736 806 VGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 806 v~~sp~g~~lasgs~Dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~s~~~~~~l~s~~~dg~I~iw~l 885 (886)
|.+.|.|-||||...|.++.+||..+++++.+. .+|...|+.+.|.+|-+ .|++++.||.|.||.|
T Consensus 647 v~lDPSgiY~atScsdktl~~~Df~sgEcvA~m-------------~GHsE~VTG~kF~nDCk-HlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 647 VILDPSGIYLATSCSDKTLCFVDFVSGECVAQM-------------TGHSEAVTGVKFLNDCK-HLISVSGDGCIFVWKL 712 (1080)
T ss_pred EEECCCccEEEEeecCCceEEEEeccchhhhhh-------------cCcchheeeeeecccch-hheeecCCceEEEEEC
Confidence 899999999999999999999999999988543 46778899999999999 9999999999999986
Done!