Query 002736
Match_columns 886
No_of_seqs 701 out of 6121
Neff 9.0
Searched_HMMs 29240
Date Tue Mar 26 22:12:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/002736.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_99-103//hhsearch_pdb/002736hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 1.0 1 1 340.5 39.1 284 564-885 104-409 (410)
2 1nr0_A Actin interacting prote 1.0 1 1 335.3 41.7 326 537-885 206-609 (611)
3 3iz6_a 40S ribosomal protein R 1.0 1 1 330.1 34.2 305 545-885 48-373 (380)
4 4b9d_A Serine/threonine-protei 1.0 1 1 326.0 6.8 206 28-328 73-283 (350)
5 4fie_A Serine/threonine-protei 1.0 1 1 323.7 12.2 211 22-331 194-410 (423)
6 4fih_A Serine/threonine-protei 1.0 1 1 323.4 11.7 211 22-331 117-333 (346)
7 3ow8_A WD repeat-containing pr 1.0 1 1 322.9 38.6 285 565-885 29-319 (321)
8 4g31_A Eukaryotic translation 1.0 1 1 322.7 10.9 225 27-330 52-288 (299)
9 1nr0_A Actin interacting prote 1.0 1 1 321.6 39.6 316 536-885 163-565 (611)
10 4gqb_B Methylosome protein 50; 1.0 1 1 321.5 37.1 288 565-885 27-329 (344)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=340.45 Aligned_cols=284 Identities=19% Similarity=0.290 Sum_probs=254.8
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCEE
Q ss_conf 35899988999996899989999689919999758644756653333487237898016998079998699962899199
Q 002736 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (886)
Q Consensus 564 l~~h~~~V~si~fs~dg~~latg~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~s~Dg~V~ 643 (886)
+.+|.++|++++|+|++.+|++|+.|+.|++||+.+... ......|...|.+++|+| ++.+|++|+.||+|+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~-------~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-------ERTLKGHTDSVQDISFDH-SGKLLASCSADMTIK 175 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC-------CEEECCCSSCEEEEEECT-TSSEEEEEETTSCCC
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCE-------EEEEECCCCCEEEEEECC-CCCEEEEEECCCEEE
T ss_conf 616677689999969999899993898599998999937-------788816678687899859-999999991898199
Q ss_pred EEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHCCCCEEEEEE-CCCCEEEEEEECCCC
Q ss_conf 9987886278881235874999998139999899981899499994750344420473034453-279869999818999
Q 002736 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPLDSG 722 (886)
Q Consensus 644 iWd~~~~~~~~~~~~h~~~V~~i~~sp~~~~~l~sgs~Dg~v~iwdl~~~~~~~~~~~~~~~~~-~~~~v~~i~~sp~~~ 722 (886)
+||+.+.+++..+.+|...|++++|+| ++.+|++|+.|++|++||+++ +..+.++. +...|.++.++|+ +
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~-------~~~~~~~~~h~~~v~~~~~~~~-g 246 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQT-------GYCVKTFTGHREWVRMVRPNQD-G 246 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTT-------CCEEEEEECCSSCEEEEEECTT-S
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEEC-CCCEEEEEECCCEEEEEECCC-------CCEEEEEECCCCCEEEEEECCC-C
T ss_conf 995899826699828999778999967-999999996899699998999-------9489999278862899999899-9
Q ss_pred CEEEEEECCCEEEEEECCCCCCCEEEEECCCCCEEEEEECC---------------------CCEEEEEECCCCEEEEEC
Q ss_conf 68999938990999965899834699912799867999649---------------------998999978994999947
Q 002736 723 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVD---------------------ATTLVSASTDNTLKLWDL 781 (886)
Q Consensus 723 ~~l~~gs~dg~I~iwDl~~~~~~~~~~~~h~~~V~~i~f~~---------------------~~~l~sgs~Dg~I~iwd~ 781 (886)
.++++|+.|+.|++||+++... ...+.+|...|.++.|+. +.++++|+.|++|++||+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~ 325 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATKEC-KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325 (410)
T ss_dssp SEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred CEEEEECCCCEEEEEECCCCCE-EEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEC
T ss_conf 9999991899099998989743-667337874589999858655431012125555566788889999938984999988
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99976656988138606788534999913999999984999299971399986101035799999988556679959999
Q 002736 782 SMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSV 861 (886)
Q Consensus 782 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v 861 (886)
+++ .++..+.+|.+.|++++|+|++.+|++|+.|+.|++||+..++.+..+ .+|...|.++
T Consensus 326 ~~~------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~-------------~~h~~~v~~l 386 (410)
T 1vyh_C 326 STG------MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-------------NAHEHFVTSL 386 (410)
T ss_dssp TTT------EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE-------------ECCSSCEEEE
T ss_pred CCC------CEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-------------CCCCCCEEEE
T ss_conf 999------669999778885899999499899999959792999989999068998-------------4777868999
Q ss_pred EECCCCCCEEEEEECCCCEEEEEE
Q ss_conf 990699959999847997999970
Q 002736 862 CWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 862 ~~~~~~~~~lvs~~~dg~I~iw~l 885 (886)
+|+|+++ .|++|+.||+|++|++
T Consensus 387 ~~~~~~~-~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 387 DFHKTAP-YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECSSSS-CEEEEETTSEEEEEC-
T ss_pred EECCCCC-EEEEEECCCCEEEEEC
T ss_conf 9828999-9999927994899737
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=335.25 Aligned_cols=326 Identities=20% Similarity=0.227 Sum_probs=218.8
Q ss_pred CCCCCCCCEEEEEECCCEEEEEECCC--CCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCC--------
Q ss_conf 04533462478641374488992057--33589998899999689998999968991999975864475665--------
Q 002736 537 INPFLEGLCKYLSFSKLRVKADLNQG--DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD-------- 606 (886)
Q Consensus 537 ~~~~~dg~~~~~~~~~~~~~~~l~~~--~l~~h~~~V~si~fs~dg~~latg~~dg~I~iwd~~~~~~~~~~-------- 606 (886)
+++..|+.+++|+..+.+....+... ...+|.+.|.+++|+||+++|++++.|+.|++||+.+.......
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred EEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCC
T ss_conf 99989991999889998286651366432356678789999979999999990898099996888701344047887664
Q ss_pred ----------------------------CCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEEE-C
Q ss_conf ----------------------------33334872378980169980799986999628991999987886278881-2
Q 002736 607 ----------------------------IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-R 657 (886)
Q Consensus 607 ----------------------------~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~s~Dg~V~iWd~~~~~~~~~~-~ 657 (886)
........+|...|.+++|+| ++.+|++++.||+|++||+.+++....+ .
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~ 364 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPD 364 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSC
T ss_pred EEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEEC-CCCEEEEEECCCCEEEEECCCCCEEEECCC
T ss_conf 0689997388799995899689996889974469837888889999918-999899995898499997887925632166
Q ss_pred CCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHC------C----------------------------CCEE
Q ss_conf 35874999998139999899981899499994750344420------4----------------------------7303
Q 002736 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH------L----------------------------GVSI 703 (886)
Q Consensus 658 ~h~~~V~~i~~sp~~~~~l~sgs~Dg~v~iwdl~~~~~~~~------~----------------------------~~~~ 703 (886)
+|...|.++.|++ ++ .+++++.|+++++|++........ + ....
T Consensus 365 ~h~~~v~~~~~s~-~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~ 442 (611)
T 1nr0_A 365 VHATMITGIKTTS-KG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 442 (611)
T ss_dssp SCSSCEEEEEECT-TS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE
T ss_pred CCCCEEEEEEECC-CC-CEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCEEEEEECCCE
T ss_conf 7765078999878-99-699998489668954688543565212001489970799807996999996763999848943
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCEEEEEEC-CCCEEEEEECCCCEEEEECC
Q ss_conf 44532798699998189996899993899099996589983469991279986799964-99989999789949999479
Q 002736 704 GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLS 782 (886)
Q Consensus 704 ~~~~~~~~v~~i~~sp~~~~~l~~gs~dg~I~iwDl~~~~~~~~~~~~h~~~V~~i~f~-~~~~l~sgs~Dg~I~iwd~~ 782 (886)
..+.+...+.+++|+|+ ++++++|+.|+.|++||+...........+|...|.+++|+ ++.+|++++.|++|++||+.
T Consensus 443 ~~~~~~~~v~~va~spd-g~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 443 TEVPISYNSSCVALSND-KQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVA 521 (611)
T ss_dssp EEEECSSCEEEEEECTT-SCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGG
T ss_pred EEEECCCCCEEEEEECC-CCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECC
T ss_conf 46406889549999289-98999968997399999459922241015778860799998999989999489989998857
Q ss_pred CCCCCCCCCCCE--EEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCE-EECCCCCCCCCCCCCCCC-CCCE
Q ss_conf 997665698813--860678853499991399999998499929997139998610-103579999998855667-9959
Q 002736 783 MCTSRVIDTPLH--SFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPAL-SFNFNHADPLSGPETDDA-AQFI 858 (886)
Q Consensus 783 ~~~~~~~~~~~~--~~~~h~~~v~~v~~sp~~~~lasgs~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~V 858 (886)
+.. ..+. .+.+|...|++++|+|++++|++|+.|+.|++|++..+.... .. ..+| ...|
T Consensus 522 ~~~-----~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~------------~~~h~~~~v 584 (611)
T 1nr0_A 522 NNF-----ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII------------KGAHAMSSV 584 (611)
T ss_dssp GTT-----EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEE------------TTSSTTSCE
T ss_pred CCC-----CEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHH------------HCCCCCCCE
T ss_conf 787-----223210264046642589989989979999799729999788755563264------------446765671
Q ss_pred EEEEECCCCCCEEEEEECCCCEEEEEE
Q ss_conf 999990699959999847997999970
Q 002736 859 SSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 859 ~~v~~~~~~~~~lvs~~~dg~I~iw~l 885 (886)
.+++|+|++. |++++.||+|++|++
T Consensus 585 ~~v~fs~d~~--l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 585 NSVIWLNETT--IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEEEEETTE--EEEEETTSCEEEEEC
T ss_pred EEEEECCCCE--EEEECCCCCEEEEEC
T ss_conf 1899858997--999528877899844
No 3
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=1.00 E-value=1 Score=330.13 Aligned_cols=305 Identities=18% Similarity=0.260 Sum_probs=255.2
Q ss_pred EEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 47864137448899205733589998899999689998999968991999975864475665333348723789801699
Q 002736 545 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 624 (886)
Q Consensus 545 ~~~~~~~~~~~~~~l~~~~l~~h~~~V~si~fs~dg~~latg~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~ 624 (886)
...|+.....+...+ .+|.+.|++++|+|++++|++|+.|++|++||..+.. .......|...|.+++
T Consensus 48 ~~~~~~~~~~~~~~l-----~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-------~~~~~~~h~~~v~~~~ 115 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTL-----QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-------KTHAIKLHCPWVMECA 115 (380)
T ss_dssp CCCCCCCCCEEEEEE-----CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-------EEEEEECCCTTCCCCE
T ss_pred CCCCCCCEEEEEECC-----CCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCC-------CCEEEECCCCCEEEEE
T ss_conf 655565213982000-----0453477899996899989999189809998788886-------0148855998789999
Q ss_pred EECCCCCEEEEECCCCCEEEEECCCCE-------EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHH
Q ss_conf 807999869996289919999878862-------7888123587499999813999989998189949999475034442
Q 002736 625 WNSYIKSQIASSNFEGVVQVWDVSRSQ-------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (886)
Q Consensus 625 ~~~~~~~~l~s~s~Dg~V~iWd~~~~~-------~~~~~~~h~~~V~~i~~sp~~~~~l~sgs~Dg~v~iwdl~~~~~~~ 697 (886)
|+| ++.++++++.|+.|++||+.+.. ....+.+|.+.|.++.|.|..+..|++|+.|++|++||+.+
T Consensus 116 ~s~-~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~----- 189 (380)
T 3iz6_a 116 FAP-NGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT----- 189 (380)
T ss_dssp ECT-TSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT-----
T ss_pred ECC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCC-----
T ss_conf 989-99989995479858999897775556773312640689754689999648997899977998199998677-----
Q ss_pred CCCCEEEEE------ECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCEEEEEEC-CCCEEEEE
Q ss_conf 047303445------32798699998189996899993899099996589983469991279986799964-99989999
Q 002736 698 HLGVSIGTI------KTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSA 770 (886)
Q Consensus 698 ~~~~~~~~~------~~~~~v~~i~~sp~~~~~l~~gs~dg~I~iwDl~~~~~~~~~~~~h~~~V~~i~f~-~~~~l~sg 770 (886)
+..+..+ .+...|.+++|++.+++++++|+.|+.|++||++....++..+.+|...|.+++|+ ++..|+||
T Consensus 190 --~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 267 (380)
T 3iz6_a 190 --GQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTG 267 (380)
T ss_dssp --CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEE
T ss_pred --CCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCEEEEE
T ss_conf --957899605667887567699992069999899997898699997888973469988748875799991699969998
Q ss_pred ECCCCEEEEECCCCCCCCCCCCCEEEECCC-------CCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCEEECCCCC
Q ss_conf 789949999479997665698813860678-------8534999913999999984999299971399986101035799
Q 002736 771 STDNTLKLWDLSMCTSRVIDTPLHSFTGHT-------NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHA 843 (886)
Q Consensus 771 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~-------~~v~~v~~sp~~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~ 843 (886)
+.|++|++||++++.. +..+..+. ..+++++|+|++.++++|+.|+.|++||...++.+..+..
T Consensus 268 s~D~~i~lwd~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~--- 338 (380)
T 3iz6_a 268 SDDGTCRLFDMRTGHQ------LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT--- 338 (380)
T ss_dssp CSSSCEEEEETTTTEE------EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC---
T ss_pred CCCCEEEEEECCCCCE------EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC---
T ss_conf 3899699998889968------8986156555665568638999889999899997999799998877815789702---
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEE
Q ss_conf 999988556679959999990699959999847997999970
Q 002736 844 DPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 844 ~~~~~~~~~~~~~~V~~v~~~~~~~~~lvs~~~dg~I~iw~l 885 (886)
...+|...|++++|+|++. .|++|+.||+|++|++
T Consensus 339 ------~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 339 ------LQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAF 373 (380)
T ss_dssp ------SCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEEC
T ss_pred ------CCCCCCCCEEEEEECCCCC-EEEEEECCCCEEEEEC
T ss_conf ------3677778457999899999-8999608998899953
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=325.98 Aligned_cols=206 Identities=18% Similarity=0.234 Sum_probs=169.1
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE-CCCCHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 734420465456789977633443358962999851-78523445049-9998686899999999999999510147042
Q 002736 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (886)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~g~sL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lHs~giiH 105 (886)
+...+...+|+|++.+++ ++. +.+.+|++||| .||+|.++|.. ....+++.+++.|++||+.||.|||++||+|
T Consensus 73 E~~il~~l~HpnIV~~~~-~~~---~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiH 148 (350)
T 4b9d_A 73 EVAVLANMKHPNIVQYRE-SFE---ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILH 148 (350)
T ss_dssp HHHHHHHCCCTTBCCEEE-EEE---ETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHCCCCCCCCEEE-EEE---ECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 999998779989891999-999---8999999994889983999999738999978999999999999999999899151
Q ss_pred CCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25687604532488534530776679999963112222234446889999730333321011234434568888535563
Q 002736 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (886)
Q Consensus 106 rDlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (886)
|||||+|||++.++++||+|||+++.......
T Consensus 149 RDlKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------------ 180 (350)
T 4b9d_A 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE------------------------------------------------ 180 (350)
T ss_dssp TTCCGGGEEECTTCCEEECSTTEESCCCHHHH------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEECCCCCCEEECCCCC------------------------------------------------
T ss_conf 35978997987899989764652144068854------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 34467766763211257554444444443000002378988503320246620035132799988646510188999997
Q 002736 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (886)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~t~~sDIwSlGvil~el 265 (886)
..+..+||++|||||++.+.+|+.++|||||||+||||
T Consensus 181 ------------------------------------------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyem 218 (350)
T 4b9d_A 181 ------------------------------------------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218 (350)
T ss_dssp ------------------------------------------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf ------------------------------------------10145788360399998799989599999999999999
Q ss_pred HC---CCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 32---8999943467767530378990222159035999997159999999898888619887798
Q 002736 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (886)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~h~~~~~~ 328 (886)
++ ||.... ....+..+....+++.....++++.+||.+||..||.+|||+.|+|+||||...
T Consensus 219 ltG~~PF~~~~-~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 219 CTLKHAFEAGS-MKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHSSCSCCCSS-HHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 97879989969-999999998089999975579999999999855896679089999639976167
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=323.74 Aligned_cols=211 Identities=17% Similarity=0.281 Sum_probs=169.0
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE-CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 222235734420465456789977633443358962999851-7852344504999986868999999999999995101
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs 100 (886)
.+..|. ..+...+|+|++.+++ ++. ..+.+|++||| .||+|.++++. ..+++.++..|++||+.||.|||+
T Consensus 194 ~~~~Ei--~il~~l~HpnIV~l~~-~~~---~~~~~~iVmEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~ 265 (423)
T 4fie_A 194 LLFNEV--VIMRDYQHENVVEMYN-SYL---VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA 265 (423)
T ss_dssp GHHHHH--HHHHHCCCTTBCCEEE-EEE---ETTEEEEEEECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHCCCCCCCCEEE-EEE---ECCEEEEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999--9998579989871689-999---89999999969899828988761--698999999999999999999998
Q ss_pred CCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 47042256876045324885345307766799999631122222344468899997303333210112344345688885
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (886)
+|||||||||+||||+.++++||+|||+|+.+.....
T Consensus 266 ~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------- 302 (423)
T 4fie_A 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------- 302 (423)
T ss_dssp TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-------------------------------------------
T ss_pred CCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCCC-------------------------------------------
T ss_conf 8904465787778985899989803726547778876-------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 35563344677667632112575544444444430000023789885033202466200351327999886465101889
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~t~~sDIwSlGv 260 (886)
.....+||++|||||++.+..|+.++|||||||
T Consensus 303 -----------------------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGv 335 (423)
T 4fie_A 303 -----------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 335 (423)
T ss_dssp -----------------------------------------------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHH
T ss_pred -----------------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHH
T ss_conf -----------------------------------------------434666474727999977999996899999999
Q ss_pred HHHHHHC---CCCCCCHHHHHHHHHCCCCC--CHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 9999732---89999434677675303789--90222159035999997159999999898888619887798674
Q 002736 261 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~h~~~~~~~~~ 331 (886)
+||||++ ||... .....+..+..... .+.+...++.+.+||.+||..||.+|||+.|+|+||||.....+
T Consensus 336 ilyeml~G~~PF~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p 410 (423)
T 4fie_A 336 MVIEMVDGEPPYFNE-PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410 (423)
T ss_dssp HHHHHHHSSCTTTTS-CHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred HHHHHHHCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCC
T ss_conf 999999787998986-999999999727998876501299999999999867895689099999609875689997
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=323.40 Aligned_cols=211 Identities=17% Similarity=0.271 Sum_probs=169.4
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE-CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 222235734420465456789977633443358962999851-7852344504999986868999999999999995101
Q 002736 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (886)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs 100 (886)
.++.|.. .+...+|+|++.+++ ++. ..+.+|++||| .||+|.+++.+ ..+++.+++.|++||+.||.|||+
T Consensus 117 ~~~~Ei~--il~~l~HpnIV~l~~-~~~---~~~~~~ivmEy~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~ 188 (346)
T 4fih_A 117 LLFNEVV--IMRDYQHENVVEMYN-SYL---VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA 188 (346)
T ss_dssp GGHHHHH--HHHHCCCTTBCCEEE-EEE---ETTEEEEEECCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHCCCCCCCCEEE-EEE---ECCEEEEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999--998679989991999-999---89999999969899808999871--898999999999999999999998
Q ss_pred CCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 47042256876045324885345307766799999631122222344468899997303333210112344345688885
Q 002736 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (886)
Q Consensus 101 ~giiHrDlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (886)
+|||||||||+|||++.++++||+|||+++.+..+..
T Consensus 189 ~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------- 225 (346)
T 4fih_A 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------- 225 (346)
T ss_dssp TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-------------------------------------------
T ss_pred CCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCC-------------------------------------------
T ss_conf 8835562788997887999889902757536678877-------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 35563344677667632112575544444444430000023789885033202466200351327999886465101889
Q 002736 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (886)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~t~~sDIwSlGv 260 (886)
.....+||++|||||++.+.+|+.++|||||||
T Consensus 226 -----------------------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGv 258 (346)
T 4fih_A 226 -----------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 258 (346)
T ss_dssp -----------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHH
T ss_pred -----------------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHH
T ss_conf -----------------------------------------------534656275827999977999996899999999
Q ss_pred HHHHHHC---CCCCCCHHHHHHHHHCCCCC--CHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 9999732---89999434677675303789--90222159035999997159999999898888619887798674
Q 002736 261 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (886)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~h~~~~~~~~~ 331 (886)
+||||++ ||... .....+..+..... .+.+...++.+.+|+.+||..||.+|||+.|+|+||||.....+
T Consensus 259 ilyeml~G~~PF~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p 333 (346)
T 4fih_A 259 MVIEMVDGEPPYFNE-PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333 (346)
T ss_dssp HHHHHHHSSCTTTTS-CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred HHHHHHHCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCC
T ss_conf 999999787998985-999999999717999887502299999999999867995689099999609865689997
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=322.90 Aligned_cols=285 Identities=20% Similarity=0.329 Sum_probs=252.6
Q ss_pred CCCCCCEEEEEECCC----CCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCC
Q ss_conf 589998899999689----9989999689919999758644756653333487237898016998079998699962899
Q 002736 565 LNSSNLVCSLSFDRD----GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (886)
Q Consensus 565 ~~h~~~V~si~fs~d----g~~latg~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~s~Dg 640 (886)
.+|.+.|++++|+|+ +.+|+||+.|+.|+||++..... .......+|...|.+++|++ ++.++++++.|+
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-----~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~ 102 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-----DLQWSLEGHQLGVVSVDISH-TLPIAASSSLDA 102 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-----EEEEEECCCSSCEEEEEECS-SSSEEEEEETTS
T ss_pred CCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCE-----EEEEEECCCCCCEEEEEECC-CCCEEEEEECCC
T ss_conf 568896799998248888888899984999899988989974-----36660056778889999889-999899993798
Q ss_pred CEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHCCCCEEEEEE-CCCCEEEEEEEC
Q ss_conf 1999987886278881235874999998139999899981899499994750344420473034453-279869999818
Q 002736 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCCVQFPL 719 (886)
Q Consensus 641 ~V~iWd~~~~~~~~~~~~h~~~V~~i~~sp~~~~~l~sgs~Dg~v~iwdl~~~~~~~~~~~~~~~~~-~~~~v~~i~~sp 719 (886)
+|++||+.+++.+..+..|...+++++|+| ++.+|++|+.|+.|++|+++. +.....+. +...+.+++|+|
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~-------~~~~~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVES-------GKKEYSLDTRGKFILSIAYSP 174 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTT-------CSEEEEEECSSSCEEEEEECT
T ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECC-CCCEEEEECCCCCEEEEECCC-------CCEEEEECCCCCEEEEEEECC
T ss_conf 099997899979899937985679999999-999899983899199998679-------946677438994299999989
Q ss_pred CCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEC
Q ss_conf 9996899993899099996589983469991279986799964-999899997899499994799976656988138606
Q 002736 720 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG 798 (886)
Q Consensus 720 ~~~~~l~~gs~dg~I~iwDl~~~~~~~~~~~~h~~~V~~i~f~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 798 (886)
+ +++|++|+.|+.|++||+++++ ++..+.+|...|.+++|+ ++.+|++|+.|++|++||++.. ..+..+.+
T Consensus 175 d-g~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~------~~~~~~~~ 246 (321)
T 3ow8_A 175 D-GKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA------NLAGTLSG 246 (321)
T ss_dssp T-SSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC------CEEEEECC
T ss_pred C-CCEEEEECCCCEEEEEECCCCC-EEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCC------CEEEEECC
T ss_conf 9-9999999289839999999990-99998025896018999489998999909980999878996------32589868
Q ss_pred CCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC
Q ss_conf 78853499991399999998499929997139998610103579999998855667995999999069995999984799
Q 002736 799 HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSG 878 (886)
Q Consensus 799 h~~~v~~v~~sp~~~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~lvs~~~dg 878 (886)
|...|.+++|+|++.+|++|+.|+.|++||+..++++..+ .+|...|.+++|+|++. .|++++.||
T Consensus 247 h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~-------------~~h~~~v~~v~~s~~g~-~l~s~~~d~ 312 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF-------------FDHQDQVWGVKYNGNGS-KIVSVGDDQ 312 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------CCCSSCEEEEEECTTSS-EEEEEETTC
T ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEE-------------CCCCCCEEEEEECCCCC-EEEEEECCC
T ss_conf 8882689999799998999818980999949998888898-------------37877389999989999-999975898
Q ss_pred CEEEEEE
Q ss_conf 7999970
Q 002736 879 NIKILEM 885 (886)
Q Consensus 879 ~I~iw~l 885 (886)
.|++|++
T Consensus 313 ~i~vwd~ 319 (321)
T 3ow8_A 313 EIHIYDC 319 (321)
T ss_dssp CEEEEEC
T ss_pred EEEEEEC
T ss_conf 0899957
No 8
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=1.00 E-value=1 Score=322.71 Aligned_cols=225 Identities=24% Similarity=0.382 Sum_probs=177.4
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCC---------CCCEEEEEEE-CCCCHHHHHCCCCC--CCCHHHHHHHHHHHHHH
Q ss_conf 573442046545678997763344335---------8962999851-78523445049999--86868999999999999
Q 002736 27 SDGVELTHGDHLRNQGGLSGVCENEAA---------IDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEI 94 (886)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~e~-~g~sL~~~l~~~~~--~~~~~~~~~i~~qi~~~ 94 (886)
++...+..-+|+|++.+++ ++.+... ...+|++||| .|++|.+++..... ..++..++.|++||+.|
T Consensus 52 ~E~~il~~l~HpnIV~~~~-~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~a 130 (299)
T 4g31_A 52 REVKALAKLEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130 (299)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCEEEE-EEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999998678989873988-998368642122567774799999367999099999725899766799999999999999
Q ss_pred HHHHCCCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 99510147042256876045324885345307766799999631122222344468899997303333210112344345
Q 002736 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (886)
Q Consensus 95 l~~lHs~giiHrDlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (886)
|+|||++||+||||||+|||++.++.+|++|||+++....+.......
T Consensus 131 l~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~-------------------------------- 178 (299)
T 4g31_A 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL-------------------------------- 178 (299)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---------------------------------------------
T ss_pred HHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCCCCCCCCCC--------------------------------
T ss_conf 999998869435476899678799958980470465657875322213--------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCC
Q ss_conf 68888535563344677667632112575544444444430000023789885033202466200351327999886465
Q 002736 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (886)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~t~~sD 254 (886)
.........+..+||++|||||++.+.+|+.++|
T Consensus 179 ----------------------------------------------~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~D 212 (299)
T 4g31_A 179 ----------------------------------------------TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVD 212 (299)
T ss_dssp -----------------------------------------------------------CCCTTSCHHHHTTCCCCTHHH
T ss_pred ----------------------------------------------CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH
T ss_conf ----------------------------------------------4555433457766682413999986999897899
Q ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 1018899999732899994346776753037899022215903599999715999999989888861988779867
Q 002736 255 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (886)
Q Consensus 255 IwSlGvil~ell~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~h~~~~~~~~ 330 (886)
||||||+||||++||....+....+..+....+|+.+...++.+.+|+.+||.+||.+|||+.|+++||||.....
T Consensus 213 iwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 213 IFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF 288 (299)
T ss_dssp HHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 9989999999816999862799999998568999887646989999999986899668919999961985578999
No 9
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=321.61 Aligned_cols=316 Identities=17% Similarity=0.244 Sum_probs=233.2
Q ss_pred CCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC
Q ss_conf 00453346247864137448899205733589998899999689998999968991999975864475665333348723
Q 002736 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (886)
Q Consensus 536 ~~~~~~dg~~~~~~~~~~~~~~~l~~~~l~~h~~~V~si~fs~dg~~latg~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 615 (886)
.+++..|+.+++|+..+.++...+ .+|.+.|++++|+||+++||+|+.|+.|++|+..+................
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~ 237 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 237 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCS
T ss_pred EEEEECCCEEEEEECCCCEEEEEE-----CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCC
T ss_conf 999928980999979997576652-----002571699999799998999989991999889998286651366432356
Q ss_pred CCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEE-----------------------------------------
Q ss_conf 789801699807999869996289919999878862788-----------------------------------------
Q 002736 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLT----------------------------------------- 654 (886)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l~s~s~Dg~V~iWd~~~~~~~~----------------------------------------- 654 (886)
|...|.+++|+| ++.+|++++.|++|++||+.+++.+.
T Consensus 238 h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 238 HSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp SSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEE
T ss_pred CCCCEEEEEECC-CCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCC
T ss_conf 678789999979-9999999908980999968887013440478876640689997388799995899689996889974
Q ss_pred --EECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHCCCCEEEEE--ECCCCEEEEEEECCCCCEEEEEEC
Q ss_conf --8123587499999813999989998189949999475034442047303445--327986999981899968999938
Q 002736 655 --EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTI--KTKANVCCVQFPLDSGRSLAFGSA 730 (886)
Q Consensus 655 --~~~~h~~~V~~i~~sp~~~~~l~sgs~Dg~v~iwdl~~~~~~~~~~~~~~~~--~~~~~v~~i~~sp~~~~~l~~gs~ 730 (886)
.+.+|...|++++|+| ++.+|++++.|++|++||+.+ +.....+ .+...|.+++|+++ + .+++++.
T Consensus 317 ~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~-------~~~~~~~~~~h~~~v~~~~~s~~-~-~l~s~s~ 386 (611)
T 1nr0_A 317 DQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIST-------GISNRVFPDVHATMITGIKTTSK-G-DLFTVSW 386 (611)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-------CCEEECSSCSCSSCEEEEEECTT-S-CEEEEET
T ss_pred CEEECCCCCCEEEEEEEC-CCCEEEEEECCCCEEEEECCC-------CCEEEECCCCCCCEEEEEEECCC-C-CEEEEEC
T ss_conf 469837888889999918-999899995898499997887-------92563216677650789998789-9-6999984
Q ss_pred CCEEEEEECCCCCC-------------C---------------------------EEEEECCCCCEEEEEEC-CCCEEEE
Q ss_conf 99099996589983-------------4---------------------------69991279986799964-9998999
Q 002736 731 DHRIYYYDLRNSKI-------------P---------------------------LCTLIGHNKTVSYVKFV-DATTLVS 769 (886)
Q Consensus 731 dg~I~iwDl~~~~~-------------~---------------------------~~~~~~h~~~V~~i~f~-~~~~l~s 769 (886)
|+.+++|++..... + +..+ .|...+.+++|+ ++.++++
T Consensus 387 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~las 465 (611)
T 1nr0_A 387 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAV 465 (611)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEE
T ss_pred CCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCEEEEEECCCEEEE-ECCCCCEEEEEECCCCEEEE
T ss_conf 89668954688543565212001489970799807996999996763999848943464-06889549999289989999
Q ss_pred EECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCC-CCCCEEECCCCCCCCCC
Q ss_conf 97899499994799976656988138606788534999913999999984999299971399-98610103579999998
Q 002736 770 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF-PMPALSFNFNHADPLSG 848 (886)
Q Consensus 770 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~ 848 (886)
|+.|++|++||+..... ..+.. .+|...|++++|+|++++|++++.|+.|++|++.. ++....
T Consensus 466 gs~D~~v~lwd~~~~~~----~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~----------- 529 (611)
T 1nr0_A 466 GGQDSKVHVYKLSGASV----SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT----------- 529 (611)
T ss_dssp EETTSEEEEEEEETTEE----EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC-----------
T ss_pred ECCCCEEEEEECCCCCE----EEEEC-CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEE-----------
T ss_conf 68997399999459922----24101-577886079999899998999948998999885778722321-----------
Q ss_pred CCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEE
Q ss_conf 8556679959999990699959999847997999970
Q 002736 849 PETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 885 (886)
Q Consensus 849 ~~~~~~~~~V~~v~~~~~~~~~lvs~~~dg~I~iw~l 885 (886)
.....|...|++++|+|++. .|++++.|++|++|++
T Consensus 530 ~~~~~H~~~V~~v~fspdg~-~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 530 NSWTFHTAKVACVSWSPDNV-RLATGSLDNSVIVWNM 565 (611)
T ss_dssp CCCCCCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred EEEEECCCCEEEEEECCCCC-EEEEEECCCCEEEEEC
T ss_conf 02640466425899899899-7999979972999978
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=1.00 E-value=1 Score=321.51 Aligned_cols=288 Identities=17% Similarity=0.235 Sum_probs=236.4
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC-----CCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCC
Q ss_conf 58999889999968999899996899199997586-----4475665333348723789801699807999869996289
Q 002736 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (886)
Q Consensus 565 ~~h~~~V~si~fs~dg~~latg~~dg~I~iwd~~~-----~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~s~D 639 (886)
..|...|.+++|+|||++|++++ |+.+++|+... ..... ..........+...|.+++|++ ...+++++.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~--d~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAP-NEGFCSAGVQTEAGVADLTWVG--ERGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTT-CGGGCSEEEEESSCEEEEEEET--TTEEEEEETT
T ss_pred CCCCCCEEEEEECCCCCEEEEEE-CCCEEEEECEEEEECCCCCCC-CCCEEEEEECCCCCEEEEEEEC--CCEEEEEECC
T ss_conf 45558888999989999999990-895687623056503655567-7654666603679878999929--9829999897
Q ss_pred CCEEEEECCCCEEEE----EECCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHCCCCEEEEEE-CCCCEEE
Q ss_conf 919999878862788----81235874999998139999899981899499994750344420473034453-2798699
Q 002736 640 GVVQVWDVSRSQVLT----EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLGVSIGTIK-TKANVCC 714 (886)
Q Consensus 640 g~V~iWd~~~~~~~~----~~~~h~~~V~~i~~sp~~~~~l~sgs~Dg~v~iwdl~~~~~~~~~~~~~~~~~-~~~~v~~ 714 (886)
|+|+|||+.+++.+. .+.+|.+.|++++|+| ++++|++|+.|++|++||+++ +..+.++. |...|.+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~-------~~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQ-------QVVLSSYRAHAAQVTC 174 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-------TEEEEEECCCSSCEEE
T ss_pred CEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECC-CCCEEEEEECCCEEEEEECCC-------CCEEEEECCCCCCEEE
T ss_conf 98999965388743586013467899789999989-989999994989399999999-------9699997576885578
Q ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEE--ECCCCCEEEEEEC--CCCEEEEEECCCCEEEEECCCCCCCCCC
Q ss_conf 99818999689999389909999658998346999--1279986799964--9998999978994999947999766569
Q 002736 715 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTL--IGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVID 790 (886)
Q Consensus 715 i~~sp~~~~~l~~gs~dg~I~iwDl~~~~~~~~~~--~~h~~~V~~i~f~--~~~~l~sgs~Dg~I~iwd~~~~~~~~~~ 790 (886)
++|+|++..+|++|+.|+.|++||+++++. ...+ ..|...+.+++|+ ++.++++|+.||+|++||++++
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~------ 247 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST------ 247 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-------
T ss_pred EEECCCCCCCEEEECCCCCCCCCCCCCCCE-EEEEECCEEECCCEEEEECCCCCCCEEEECCCCCEEEEECCCC------
T ss_conf 886589997401103443551023445520-0111010000121235661799960588615871898989999------
Q ss_pred CCCEEEECCCCCEEEEEEECCC-CEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 8813860678853499991399-999998499929997139998610103579999998855667995999999069995
Q 002736 791 TPLHSFTGHTNVKNFVGLSVWD-GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSN 869 (886)
Q Consensus 791 ~~~~~~~~h~~~v~~v~~sp~~-~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~ 869 (886)
+++.++.+|...|++++|+|++ .+|++|+.|+.|+|||+..++.+. ..+|...|.+++|+|++..
T Consensus 248 ~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~--------------~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 248 SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR--------------SQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp -CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE--------------ECCCSSCEEEEEECSSSTT
T ss_pred CEEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEEE--------------ECCCCCCEEEEEEECCCCE
T ss_conf 59899837889988999926999099999389949999999996999--------------7288997789999179996
Q ss_pred EEEEEECCCCEEEEEE
Q ss_conf 9999847997999970
Q 002736 870 TLVAANSSGNIKILEM 885 (886)
Q Consensus 870 ~lvs~~~dg~I~iw~l 885 (886)
+|++++.||+|++|++
T Consensus 314 llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVV 329 (344)
T ss_dssp EEEEEETTSCEEEEEC
T ss_pred EEEEECCCCEEEEEEC
T ss_conf 9999937995999989
Done!