Query         002740
Match_columns 885
No_of_seqs    525 out of 4258
Neff          7.8 
Searched_HMMs 29240
Date          Tue Mar 26 22:16:44 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m2/002740.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_104-107//hhsearch_pdb/002740hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3e7a_A PP-1A, serine/threonine   1.0       1       1  564.4  31.8  291  531-837     8-298 (299)
  2 1fjm_A Protein serine/threonin   1.0       1       1  544.4  31.8  318  531-874     9-327 (330)
  3 3icf_A PPT, serine/threonine-p   1.0       1       1  539.9  30.7  291  527-841    13-322 (335)
  4 3ll8_A Serine/threonine-protei   1.0       1       1  539.5  31.8  288  531-841    30-328 (357)
  5 3h63_A Serine/threonine-protei   1.0       1       1  535.8  31.9  292  526-841    11-308 (315)
  6 1aui_A Calcineurin, serine/thr   1.0       1       1  531.3  32.4  288  531-841    43-341 (521)
  7 2ie4_C PP2A-alpha;, serine/thr   1.0       1       1  515.7  31.2  288  529-840     8-295 (309)
  8 1wao_1 Serine/threonine protei   1.0       1       1  495.8  35.6  291  527-841   165-461 (477)
  9 1zgk_A Kelch-like ECH-associat   1.0       1       1  314.8  33.9  282   23-367     8-292 (308)
 10 2zwa_A Leucine carboxyl methyl   1.0       1       1  314.4  31.0  300   18-362   377-694 (695)

No 1  
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=1.00  E-value=1  Score=564.41  Aligned_cols=291  Identities=47%  Similarity=0.880  Sum_probs=276.0

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999983199556424986998067899889999999809999999
Q 002740          531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  610 (885)
Q Consensus       531 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~ivGDiHG~~~~L~~~l~~~g~~~~~~  610 (885)
                      ++.+|.+|++.+.+++..  ...++++++..||++|+++|.+||+++++.+|++||||||||+.+|+++|+..++++.+ 
T Consensus         8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~-   84 (299)
T 3e7a_A            8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES-   84 (299)
T ss_dssp             HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred             HHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC-
T ss_conf             999999997322568875--56789999999999999999749873602897799951889999999999980999976-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96300499942435899981999999999776189967994268730001210288599998827786413344563430
Q 002740          611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  690 (885)
Q Consensus       611 ~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  690 (885)
                           +|||||||||||++|+||+.+|+++|+++|.++++||||||.+.++..|||++||..+|+    ..+|+.+.++|
T Consensus        85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f  155 (299)
T 3e7a_A           85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF  155 (299)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHH----HHHHHHHHHHH
T ss_conf             -----189688614778882999999999875479828998268501110123331178888755----89999999998


Q ss_pred             CCCCEEEEEECEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf             67752899908078733887788768777530258821599984000123489999987879654899990377298899
Q 002740          691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV  770 (885)
Q Consensus       691 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~  770 (885)
                      ++||+++++++++|||||||+|.+.++++|+.+.||.+.+..+ +++|||||||..  ...+|.+|+||.| +.||++++
T Consensus       156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~  231 (299)
T 3e7a_A          156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV  231 (299)
T ss_dssp             TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred             HHCCCEEEECCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCH-HHHHHHCCCCCC--CCCCCCCCCCCCC-EEECHHHH
T ss_conf             6298338987829998576686557899997364887688610-356643378644--5567565889860-21388999


Q ss_pred             HHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf             9999974970999801222355089539918999503565698898399999948621996992379
Q 002740          771 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPL  837 (885)
Q Consensus       771 ~~fl~~~~~~~iiR~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~  837 (885)
                      ++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+++++|+|.
T Consensus       232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~  298 (299)
T 3e7a_A          232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  298 (299)
T ss_dssp             HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHHHHCCCEEEEECCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf             9999987982999857020046599069949999897542789885179999989984889995689


No 2  
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=1.00  E-value=1  Score=544.35  Aligned_cols=318  Identities=45%  Similarity=0.815  Sum_probs=288.2

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999983199556424986998067899889999999809999999
Q 002740          531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  610 (885)
Q Consensus       531 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~ivGDiHG~~~~L~~~l~~~g~~~~~~  610 (885)
                      ++++|.+|++.+.+++.  ....|+++++..||++++++|.+||+++++..|++||||||||+++|+++|+..++++.+ 
T Consensus         9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~-   85 (330)
T 1fjm_A            9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES-   85 (330)
T ss_dssp             HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred             HHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCC-
T ss_conf             99999999725356776--467789999999999999999749986852476588437878899999999985899866-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96300499942435899981999999999776189967994268730001210288599998827786413344563430
Q 002740          611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  690 (885)
Q Consensus       611 ~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  690 (885)
                           +|||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||++||..+|+    ..+|..+.++|
T Consensus        86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f  156 (330)
T 1fjm_A           86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF  156 (330)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHH
T ss_conf             -----289689867888876999999998655258855786077357665433212366654313----99999999999


Q ss_pred             CCCCEEEEEECEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf             67752899908078733887788768777530258821599984000123489999987879654899990377298899
Q 002740          691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV  770 (885)
Q Consensus       691 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~  770 (885)
                      ++||++++++++++|||||++|.+.++++|+.+.||.+.+..+ +++|+|||||..  ...+|.+|.||.+ +.||++++
T Consensus       157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~  232 (330)
T 1fjm_A          157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV  232 (330)
T ss_dssp             TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred             HHCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC-HHHHHHHCCCCC--CCCCCCCCCCCCC-EEECHHHH
T ss_conf             8298559985829998067785547788876640676576522-477887528765--5578675568970-33373779


Q ss_pred             HHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             99999749709998012223550895399189995035656988983999999486219969923799999999999731
Q 002740          771 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPER  850 (885)
Q Consensus       771 ~~fl~~~~~~~iiR~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  850 (885)
                      ++||+.+++++||||||++++||+++++++|||||||||||+.++|+||+|.|++++.+++++|+|.+... .       
T Consensus       233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~~-~-------  304 (330)
T 1fjm_A          233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNK-G-------  304 (330)
T ss_dssp             HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred             HHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC-C-------
T ss_conf             99998589864766664225875881699499981884103377876799998799857689962786443-3-------


Q ss_pred             CCHHHHHHH-HHCCCCCCCCCCCCC
Q ss_conf             220358888-530799999999999
Q 002740          851 VIDDMWMQE-LNIQRPPTPTRGRPQ  874 (885)
Q Consensus       851 ~~~~~~~~~-~~~~~~~~p~~~~~~  874 (885)
                        ...|+.+ ....||+||||++++
T Consensus       305 --~~~~~~~~~~~~~~~~~~~~~~~  327 (330)
T 1fjm_A          305 --KYGQFSGLNPGGRPITPPRNSAK  327 (330)
T ss_dssp             -------------------------
T ss_pred             --CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             --32221100013589989987411


No 3  
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=1.00  E-value=1  Score=539.87  Aligned_cols=291  Identities=35%  Similarity=0.646  Sum_probs=270.5

Q ss_pred             CCHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC------EEEEECCCCCHHHHHHH
Q ss_conf             704799999-99949998889988432259999999999999998319955642498------69980678998899999
Q 002740          527 PQGLHKKII-STLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP------VKVFGDLHGQFGDLMRL  599 (885)
Q Consensus       527 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~------i~ivGDiHG~~~~L~~~  599 (885)
                      ...+++++| +.+.+.+          .|++.++..||++|+++|++||+++++..|      ++||||||||+++|+++
T Consensus        13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l   82 (335)
T 3icf_A           13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL   82 (335)
T ss_dssp             CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf             99999999999998289----------99999999999999999984998688437766672489980577799999999


Q ss_pred             HHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCC
Q ss_conf             99809999999963004999424358999819999999997761899679942687300012102885999988277864
Q 002740          600 FDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG  679 (885)
Q Consensus       600 l~~~g~~~~~~~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~  679 (885)
                      |+..++++.+.     +|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|.    
T Consensus        83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~----  153 (335)
T 3icf_A           83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS----  153 (335)
T ss_dssp             HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred             HHHCCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHCC----
T ss_conf             99708999896-----899958833777571999999999744178827996575365332110242067675404----


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECEEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1334456343067752899908078733887-788768777530258821599984000123489999987879654899
Q 002740          680 IWAWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNAR  758 (885)
Q Consensus       680 ~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~r  758 (885)
                      ..+|+.+.++|++||+++++++++||||||| +|.+.++++|+.+.|+.+.+..+ +++|||||||..   ..+|.+|+|
T Consensus       154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R  229 (335)
T 3icf_A          154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR  229 (335)
T ss_dssp             HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred             HHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC-CHHHHHCCCCCC---CCCCCCCCC
T ss_conf             8999999999863510279768089964786887657789997576654431123-212210368877---687563778


Q ss_pred             CCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEECC-----------CC
Q ss_conf             9903772988999999974970999801222355089539918999503565698898399999948-----------62
Q 002740          759 GPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGR-----------GL  827 (885)
Q Consensus       759 g~~~~~fg~~~~~~fl~~~~~~~iiR~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~~~~-----------~~  827 (885)
                      |.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++           ++
T Consensus       230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~  308 (335)
T 3icf_A          230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ  308 (335)
T ss_dssp             C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred             CCC-EEECHHHHHHHHHHCCCEEEEECCCEECCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf             875-0248899999999889848997474004738996699389997786437788972699998065454333455667


Q ss_pred             EEEEEEECCCCCCC
Q ss_conf             19969923799999
Q 002740          828 VVVPKLIHPLPPPL  841 (885)
Q Consensus       828 ~~~~~~~~~~~~~~  841 (885)
                      .+.++.|.+.|...
T Consensus       309 ~~~~~~f~~~~~~~  322 (335)
T 3icf_A          309 NLIIETFEAVEHPD  322 (335)
T ss_dssp             TEEEEEECCCCCCS
T ss_pred             CEEEEEEECCCCCC
T ss_conf             52389974589999


No 4  
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=1.00  E-value=1  Score=539.53  Aligned_cols=288  Identities=36%  Similarity=0.624  Sum_probs=266.0

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999983199556424986998067899889999999809999999
Q 002740          531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  610 (885)
Q Consensus       531 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~ivGDiHG~~~~L~~~l~~~g~~~~~~  610 (885)
                      .+.+++.+.+.+          .++++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+ 
T Consensus        30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~-   98 (357)
T 3ll8_A           30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT-   98 (357)
T ss_dssp             HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred             HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCC-
T ss_conf             999999998579----------899999999999999999849986876364005316888899999999962899986-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96300499942435899981999999999776189967994268730001210288599998827786413344563430
Q 002740          611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  690 (885)
Q Consensus       611 ~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  690 (885)
                           +|||||||||||++|+||+.+|++||+++|+++++||||||.+.++..|||++||..+|+    ..+|+.+.++|
T Consensus        99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f  169 (357)
T 3ll8_A           99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF  169 (357)
T ss_dssp             -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCHHHHHHCCC----HHHHHHHHHHH
T ss_conf             -----799888705788675999999998665469848998276565432112672356553133----36899999999


Q ss_pred             CCCCEEEEEECEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCC----CCCCCC-CCCCCCEEEE
Q ss_conf             67752899908078733887788768777530258821599984000123489999987----879654-8999903772
Q 002740          691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRP-NARGPGLVTF  765 (885)
Q Consensus       691 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~-n~rg~~~~~f  765 (885)
                      ++||++++++++++||||||+|.+.++++|+.+.|+.+.+..+ +++|||||||.....    ..+|.+ ++||+| +.|
T Consensus       170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F  247 (357)
T 3ll8_A          170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY  247 (357)
T ss_dssp             HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred             HHCCCCEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCC-CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-EEE
T ss_conf             7388205972528999267685547798875244665577667-16676605863224666655424457778872-388


Q ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC------EEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             9889999999749709998012223550895399------1899950356569889839999994862199699237999
Q 002740          766 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP  839 (885)
Q Consensus       766 g~~~~~~fl~~~~~~~iiR~H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~  839 (885)
                      |++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.+++++ +.++.|.+.|-
T Consensus       248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h  326 (357)
T 3ll8_A          248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH  326 (357)
T ss_dssp             CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC-CEEEEECCCCC
T ss_conf             95899999998799599980313116048845886789985899979986589888537999998996-35999568899


Q ss_pred             CC
Q ss_conf             99
Q 002740          840 PL  841 (885)
Q Consensus       840 ~~  841 (885)
                      .+
T Consensus       327 p~  328 (357)
T 3ll8_A          327 PY  328 (357)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             88


No 5  
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=1.00  E-value=1  Score=535.82  Aligned_cols=292  Identities=32%  Similarity=0.583  Sum_probs=271.7

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC----EEEEECCCCCHHHHHHHHH
Q ss_conf             970479999999949998889988432259999999999999998319955642498----6998067899889999999
Q 002740          526 SPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFD  601 (885)
Q Consensus       526 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~ivGDiHG~~~~L~~~l~  601 (885)
                      -...+.+++|+.+.+.+          .|++.++..||.+|+++|++||++++++.|    ++||||||||+.+|+++|+
T Consensus        11 ~~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~   80 (315)
T 3h63_A           11 VTISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFE   80 (315)
T ss_dssp             CCHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             89999999999998079----------99999999999999999985998478724888427998058878999999999


Q ss_pred             HHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHH
Q ss_conf             80999999996300499942435899981999999999776189967994268730001210288599998827786413
Q 002740          602 EYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW  681 (885)
Q Consensus       602 ~~g~~~~~~~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~  681 (885)
                      ..++++.+.     .|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+    ..
T Consensus        81 ~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~  151 (315)
T 3h63_A           81 LNGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQ  151 (315)
T ss_dssp             HHCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HH
T ss_pred             HHCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH----HH
T ss_conf             747998887-----899968842778572999999998413269847998367511000101330078898740----67


Q ss_pred             HHHHHHHHCCCCCEEEEEECEEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             34456343067752899908078733887-78876877753025882159998400012348999998787965489999
Q 002740          682 AWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGP  760 (885)
Q Consensus       682 ~~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~  760 (885)
                      +|+.+.++|++||++++++++++|||||+ +|.+.++++|+.+.|+.+.+..+ +++|||||||..   ..+|.+|+||.
T Consensus       152 l~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~  227 (315)
T 3h63_A          152 MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGV  227 (315)
T ss_dssp             HHHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSS
T ss_pred             HHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHEECCCCC---CCCCCCCCCCC
T ss_conf             89999999852983899869789967987876668899998474666543344-055403068987---78857489985


Q ss_pred             CEEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEEC-CCCEEEEEEECCCCC
Q ss_conf             0377298899999997497099980122235508953991899950356569889839999994-862199699237999
Q 002740          761 GLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG-RGLVVVPKLIHPLPP  839 (885)
Q Consensus       761 ~~~~fg~~~~~~fl~~~~~~~iiR~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~  839 (885)
                      | +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.++ +++...++.|.+.|.
T Consensus       228 g-~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~  306 (315)
T 3h63_A          228 S-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPH  306 (315)
T ss_dssp             S-EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCC
T ss_pred             E-EEECHHHHHHHHHHCCCCEEEEECEEECCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCC
T ss_conf             2-787889999999986991899826240388599359939999898653778886379999987987074699746899


Q ss_pred             CC
Q ss_conf             99
Q 002740          840 PL  841 (885)
Q Consensus       840 ~~  841 (885)
                      ..
T Consensus       307 ~~  308 (315)
T 3h63_A          307 PN  308 (315)
T ss_dssp             CS
T ss_pred             CC
T ss_conf             98


No 6  
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=1.00  E-value=1  Score=531.27  Aligned_cols=288  Identities=37%  Similarity=0.629  Sum_probs=266.3

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999499988899884322599999999999999983199556424986998067899889999999809999999
Q 002740          531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  610 (885)
Q Consensus       531 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~ivGDiHG~~~~L~~~l~~~g~~~~~~  610 (885)
                      ++.++..+.+.+          .+++.++..||++|+++|.+||+++++..|++|||||||||++|+++|+..+.++.+ 
T Consensus        43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d-  111 (521)
T 1aui_A           43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT-  111 (521)
T ss_dssp             HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred             HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCC-
T ss_conf             999999997079----------899999999999999999868985764363023047877799999999960799765-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             96300499942435899981999999999776189967994268730001210288599998827786413344563430
Q 002740          611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  690 (885)
Q Consensus       611 ~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  690 (885)
                           .|||||||||||++|+||+.+|++||++||.++++||||||.+.++..|||.+||..+|+    ..+|..+.++|
T Consensus       112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f  182 (521)
T 1aui_A          112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF  182 (521)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHH
T ss_conf             -----699717757888787999999999750178808996377508999877175378888640----58899999999


Q ss_pred             CCCCEEEEEECEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCC----CCCCCCC-CCCCCEEEE
Q ss_conf             67752899908078733887788768777530258821599984000123489999987----8796548-999903772
Q 002740          691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRPN-ARGPGLVTF  765 (885)
Q Consensus       691 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~n-~rg~~~~~f  765 (885)
                      ++||++++++++++||||||+|.+.++++|+.+.|+.+.+..+ +++|||||||.....    ..+|.+| .||+| +.|
T Consensus       183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F  260 (521)
T 1aui_A          183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY  260 (521)
T ss_dssp             TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred             HHCCCEEEECCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHEECCCCCCCCCCCCCCCEECCCCCCCC-CCC
T ss_conf             8588027964872687777675657777764225776787412-13431234752124655567640026677866-544


Q ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC------EEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             9889999999749709998012223550895399------1899950356569889839999994862199699237999
Q 002740          766 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP  839 (885)
Q Consensus       766 g~~~~~~fl~~~~~~~iiR~H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~  839 (885)
                      |++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.++++ .+.++.|.+.+.
T Consensus       261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~  339 (521)
T 1aui_A          261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH  339 (521)
T ss_dssp             CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred             CHHHHHHHHHHCCCCEEEECCCHHCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECC-CCEEEEECCCCC
T ss_conf             8899999999869938997662020640541488678898289991886647788843899998089-634899558898


Q ss_pred             CC
Q ss_conf             99
Q 002740          840 PL  841 (885)
Q Consensus       840 ~~  841 (885)
                      .+
T Consensus       340 p~  341 (521)
T 1aui_A          340 PY  341 (521)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             87


No 7  
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=1.00  E-value=1  Score=515.66  Aligned_cols=288  Identities=40%  Similarity=0.713  Sum_probs=270.8

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf             47999999994999888998843225999999999999999831995564249869980678998899999998099999
Q 002740          529 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPST  608 (885)
Q Consensus       529 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~ivGDiHG~~~~L~~~l~~~g~~~~  608 (885)
                      ..++.+|+.|.+.+          .++++++..||++|+++|++||+++++..|++||||||||+++|.++|+..+.++.
T Consensus         8 ~~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~   77 (309)
T 2ie4_C            8 KELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPD   77 (309)
T ss_dssp             HHHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTT
T ss_pred             HHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCC
T ss_conf             99999999997379----------98999999999999999975898773368779981577889999999997499999


Q ss_pred             CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             99963004999424358999819999999997761899679942687300012102885999988277864133445634
Q 002740          609 AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQ  688 (885)
Q Consensus       609 ~~~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~  688 (885)
                      +      .|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+..   .+|+.+.+
T Consensus        78 ~------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~  148 (309)
T 2ie4_C           78 T------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTD  148 (309)
T ss_dssp             S------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHH
T ss_pred             C------EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCH---HHHHHHHH
T ss_conf             8------89991886688877099999999987637883799847888888744644428877631417---89999999


Q ss_pred             HCCCCCEEEEEECEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHH
Q ss_conf             30677528999080787338877887687775302588215999840001234899999878796548999903772988
Q 002740          689 LFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPD  768 (885)
Q Consensus       689 ~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~  768 (885)
                      +|++||++++++++++|||||++|.+.++++|+.+.|+.+.+..+ .++|+|||||..   ..+|.+++||.| +.||++
T Consensus       149 ~~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~  223 (309)
T 2ie4_C          149 LFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQD  223 (309)
T ss_dssp             HTTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHH
T ss_pred             HHHHCCCEEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHH-HHHHHHHCCCCC---CCCCCCCCCCCC-CCCCHH
T ss_conf             998398159986819997888887666788887530566687167-789874179754---555445778862-133889


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             999999974970999801222355089539918999503565698898399999948621996992379999
Q 002740          769 RVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP  840 (885)
Q Consensus       769 ~~~~fl~~~~~~~iiR~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~  840 (885)
                      ++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+.++.|+|.+..
T Consensus       224 ~~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~  295 (309)
T 2ie4_C          224 ISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR  295 (309)
T ss_dssp             HHHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred             HHHHHHHHCCCEEEEECCCCEECCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf             999999984972898168012387799429939999798640357787079999878985768998578986


No 8  
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=1.00  E-value=1  Score=495.82  Aligned_cols=291  Identities=33%  Similarity=0.595  Sum_probs=268.3

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC----EEEEECCCCCHHHHHHHHHH
Q ss_conf             70479999999949998889988432259999999999999998319955642498----69980678998899999998
Q 002740          527 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE  602 (885)
Q Consensus       527 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~ivGDiHG~~~~L~~~l~~  602 (885)
                      .....+.++..+...+          .+++.++..||.++.++|.+||+++++..|    ++||||||||+.+|+++|+.
T Consensus       165 tl~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~  234 (477)
T 1wao_1          165 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL  234 (477)
T ss_dssp             CHHHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             1799999999997679----------899999999999999997269975973058876069981787877999999997


Q ss_pred             HCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCCHHH
Q ss_conf             09999999963004999424358999819999999997761899679942687300012102885999988277864133
Q 002740          603 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA  682 (885)
Q Consensus       603 ~g~~~~~~~~~~~~~vfLGDyvDrG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~  682 (885)
                      .+.++..+     .|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||..||..+|+.    .+
T Consensus       235 ~~~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~  305 (477)
T 1wao_1          235 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QM  305 (477)
T ss_dssp             HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----TH
T ss_pred             CCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHH----HH
T ss_conf             59998767-----4898366457783629999999999864899668605774077775306839999998629----99


Q ss_pred             HHHHHHHCCCCCEEEEEECEEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             4456343067752899908078733887-788768777530258821599984000123489999987879654899990
Q 002740          683 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPG  761 (885)
Q Consensus       683 ~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~  761 (885)
                      |..+.++|++||++++++++++|||||+ +|...++++|+.+.|+.+.+..+ +++|+|||||..   ..+|.+++||.+
T Consensus       306 ~~~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~  381 (477)
T 1wao_1          306 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS  381 (477)
T ss_dssp             HHHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS
T ss_pred             HHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHH-HHHHHCCCCCCC---CCCCCCCCCCCC
T ss_conf             9999998602883799748289977997866668988997366878895255-554311378876---678685888875


Q ss_pred             EEEECHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEE-CCCCEEEEEEECCCCCC
Q ss_conf             37729889999999749709998012223550895399189995035656988983999999-48621996992379999
Q 002740          762 LVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVV-GRGLVVVPKLIHPLPPP  840 (885)
Q Consensus       762 ~~~fg~~~~~~fl~~~~~~~iiR~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~~-~~~~~~~~~~~~~~~~~  840 (885)
                       +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.| ++++.+.++.|.+.+..
T Consensus       382 -~~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~  460 (477)
T 1wao_1          382 -CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP  460 (477)
T ss_dssp             -EEECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCC
T ss_pred             -EEECHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCC
T ss_conf             -5678899999999849769998998873986991599499996786214688865799999879872778998478999


Q ss_pred             C
Q ss_conf             9
Q 002740          841 L  841 (885)
Q Consensus       841 ~  841 (885)
                      .
T Consensus       461 ~  461 (477)
T 1wao_1          461 N  461 (477)
T ss_dssp             S
T ss_pred             C
T ss_conf             9


No 9  
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=1.00  E-value=1  Score=314.83  Aligned_cols=282  Identities=18%  Similarity=0.267  Sum_probs=246.1

Q ss_pred             CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf             89999874123589964335789999999598799999778998754444468389998799939996589999963576
Q 002740           23 DEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAA  102 (885)
Q Consensus        23 ~~~~P~~R~~ht~~~i~~~~~~~~~iyifGG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~~~~P~~R~~  102 (885)
                      -.+.|.+|.+|+++.+      +++||+|||..  ..             ..+++++||+.+++|+.++   .+|.+|..
T Consensus         8 ~~~~~~~~~~~~~~~~------~~~i~v~GG~~--~~-------------~~~~~~~~d~~~~~W~~~~---~~p~~r~~   63 (308)
T 1zgk_A            8 HHSSGLVPRGSHAPKV------GRLIYTAGGYF--RQ-------------SLSYLEAYNPSNGTWLRLA---DLQVPRSG   63 (308)
T ss_dssp             -------------CCC------CCCEEEECCBS--SS-------------BCCCEEEEETTTTEEEECC---CCSSCCBS
T ss_pred             CCCCCEEECCCCCCCC------CCEEEEEECCC--CC-------------CCCEEEEECCCCCEEEECC---CCCCCCCC
T ss_conf             3458703577335677------99899990757--98-------------7632899868999072898---89724011


Q ss_pred             CEEEEECCEEEEECCCC---CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCC
Q ss_conf             47999899999996758---999742639999904992079998524999987413199997994999992589986568
Q 002740          103 HAAAAVGTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLS  179 (885)
Q Consensus       103 hsa~~~~~~iyv~GG~~---~~~~~~~dl~~~d~~~~~~~W~~i~~~~~~p~~R~~hs~~~~~~~~lyv~GG~~~~~~~n  179 (885)
                      |+++++++.||++||..   ......+++|+||+.++  +|..+   .++|.+|.+|+++++++ ++|++||.++...++
T Consensus        64 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~--~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~  137 (308)
T 1zgk_A           64 LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPC---APMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHN  137 (308)
T ss_dssp             CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT--EEEEC---CCCSSCCBTCEEEEETT-EEEEECCEETTEECC
T ss_pred             CEEEEECCEEEEECCCCCCCCCCEECCEEEEECCCCC--EEEEC---CCCCCCCCCCEEEEECC-EEEEECCCCCCCCCC
T ss_conf             3699999999998797677999811142999989999--38587---98776763218999899-999985877986455


Q ss_pred             CEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf             49999579998158982799999996642159995698999992689999963445999917798269993899999833
Q 002740          180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPR  259 (885)
Q Consensus       180 dv~~yd~~t~~~~W~~i~~~g~~P~~r~~hsa~~~~~~~l~i~GG~~~~~~~l~dv~~l~~~~~~~W~w~~~~~~~P~~R  259 (885)
                      ++|+||+.++  +|+.+.+   +|.+|..|+++.. ++.+|++||.+.... +++++.|+..++   +|..++.+ |.+|
T Consensus       138 ~~~~yd~~~~--~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~-~~~~~~yd~~~~---~W~~~~~~-p~~r  206 (308)
T 1zgk_A          138 SVERYEPERD--EWHLVAP---MLTRRIGVGVAVL-NRLLYAVGGFDGTNR-LNSAECYYPERN---EWRMITAM-NTIR  206 (308)
T ss_dssp             CEEEEETTTT--EEEECCC---CSSCCBSCEEEEE-TTEEEEECCBCSSCB-CCCEEEEETTTT---EEEECCCC-SSCC
T ss_pred             CEEEECCCCC--EEEECCC---CCCCCCCEEEEEE-CCEEEEEECCCCCCC-CCEEEEEECCCC---EEEECCCC-CCCC
T ss_conf             3899889999--1867798---7764324079999-999999928789975-762899908999---59668988-7766


Q ss_pred             CEEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCE
Q ss_conf             00078887999999914479999755787099998889909984578556778899999999757644432188997999
Q 002740          260 YQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVR  339 (885)
Q Consensus       260 ~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~p~~R~~hs~~~~~~~  339 (885)
                      ++|+++.++++|||+||......    .+++++||+.+++|+.+..++                  .+|..|++++++++
T Consensus       207 ~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~p------------------~~r~~~~~~~~~~~  264 (308)
T 1zgk_A          207 SGAGVCVLHNCIYAAGGYDGQDQ----LNSVERYDVETETWTFVAPMK------------------HRRSALGITVHQGR  264 (308)
T ss_dssp             BSCEEEEETTEEEEECCBCSSSB----CCCEEEEETTTTEEEECCCCS------------------SCCBSCEEEEETTE
T ss_pred             CCCEEEEECCEEEEEECCCCCCC----CCEEEEEECCCCCEEECCCCC------------------CCCCCEEEEEECCE
T ss_conf             30369998999999808789975----612899908999288899899------------------88632089999999


Q ss_pred             EEEECCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf             9999278998787837996379987677
Q 002740          340 IYIYGGLKGDILLDDFLVAENSPFQSDV  367 (885)
Q Consensus       340 Iyi~GG~~~~~~~~D~~~ld~~~~~~~~  367 (885)
                      |||+||+++...+++++++|..+.++..
T Consensus       265 i~v~GG~~~~~~~~~v~~yd~~~~~W~~  292 (308)
T 1zgk_A          265 IYVLGGYDGHTFLDSVECYDPDTDTWSE  292 (308)
T ss_dssp             EEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred             EEEECCCCCCCCCCEEEEECCCCCEEEE
T ss_conf             9999085888635338998089998840


No 10 
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=1.00  E-value=1  Score=314.42  Aligned_cols=300  Identities=12%  Similarity=0.136  Sum_probs=241.1

Q ss_pred             CEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEC-C--CC
Q ss_conf             03754899998741235899643357899999995987999997789987544444683899987999399965-8--99
Q 002740           18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR-P--AG   94 (885)
Q Consensus        18 ~~w~~~~~~P~~R~~ht~~~i~~~~~~~~~iyifGG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~-~--~~   94 (885)
                      .+|...+..|..|++|+++ +      +++||+|||... .              ..+++++||+.+++|+.++ +  .+
T Consensus       377 ~~~~~~~~~p~rr~g~~~~-~------~~~iyv~GG~~~-~--------------~~~~v~~yd~~~~~W~~~~~~~p~~  434 (695)
T 2zwa_A          377 YQLLECECPINRKFGDVDV-A------GNDVFYMGGSNP-Y--------------RVNEILQLSIHYDKIDMKNIEVSSS  434 (695)
T ss_dssp             EEEEECCCTTCCBSCEEEE-C------SSCEEEECCBSS-S--------------BCCCEEEEEECSSCEEEEECCCCCS
T ss_pred             EEEECCCCCCCCCEEEEEE-E------CCEEEEECCCCC-C--------------CCCCEEEEECCCCEEEEECCCCCCC
T ss_conf             3675168899883568998-7------999999899898-8--------------7676799988999399812578778


Q ss_pred             CCCCCCCCCEEEEE--CCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECC
Q ss_conf             99963576479998--9999999675899974263999990499207999852499998741319999799499999258
Q 002740           95 EPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN  172 (885)
Q Consensus        95 ~~P~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~dl~~~d~~~~~~~W~~i~~~~~~p~~R~~hs~~~~~~~~lyv~GG~  172 (885)
                      .+|.+|.+|+++++  ++.||++||........+++|+||+.++  +|..+   +++|.+|++|+++++.++++|+|||.
T Consensus       435 ~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~---~~~p~~R~~h~~~~~~~~~iyv~GG~  509 (695)
T 2zwa_A          435 EVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMI---KSLSHTRFRHSACSLPDGNVLILGGV  509 (695)
T ss_dssp             CCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT--EEEEC---CCCSBCCBSCEEEECTTSCEEEECCB
T ss_pred             CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCC--CEEEC---CCCCCCCCCCEEEEECCCEEEEECCC
T ss_conf             99965451178998659989998588899985463799748988--18989---99998750344799769989998887


Q ss_pred             CCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEC-C-CEEEEECCCCCCC-CCCCCEEEEECCCCCEE---
Q ss_conf             9986568499995799981589827999999966421599956-9-8999992689999-96344599991779826---
Q 002740          173 DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-D-GMFLLCGGRDASG-APLADAYGLLMHRNGQW---  246 (885)
Q Consensus       173 ~~~~~~ndv~~yd~~t~~~~W~~i~~~g~~P~~r~~hsa~~~~-~-~~l~i~GG~~~~~-~~l~dv~~l~~~~~~~W---  246 (885)
                      ++..   ++|+||+.++  +|+.+.+.+.+|.+|..|++++.. + +++|++||....+ ..++++|.|+..++ .|   
T Consensus       510 ~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~-~w~~~  583 (695)
T 2zwa_A          510 TEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE-NATEP  583 (695)
T ss_dssp             CSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT-CSSCC
T ss_pred             CCCC---CEEEEECCCC--CEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEECCEEEEECCCC-CCCCC
T ss_conf             7999---8999988999--5688467899997643136899917999899987767999806175799983588-65331


Q ss_pred             -EEEECCCCCCCCCCEEEEEEEC-CEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -9993899999833000788879-99999914479999755787099998889909984578556778899999999757
Q 002740          247 -EWTLAPGVAPSPRYQHAAVFVG-ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLE  324 (885)
Q Consensus       247 -~w~~~~~~~P~~R~~hs~~~~~-~~i~V~GG~~~~~~~~~~~~~v~~yD~~t~~W~~v~~~~~~~~~~~~~~~~~~~~~  324 (885)
                       +|..+...++.+|++|+++.++ ++|||+||...... ....+++++||+.+++|+.+. ++.....          ..
T Consensus       584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~-~p~~~~~----------~~  651 (695)
T 2zwa_A          584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIP-ISRRIWE----------DH  651 (695)
T ss_dssp             EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECC-CCHHHHH----------HS
T ss_pred             EEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCC-CCCCCEEEEEECCCCEEEEEE-CCCCCCC----------CC
T ss_conf             57877678999886545699968997999888367788-787780899989999399863-4654457----------87


Q ss_pred             CCCCCCEEEEEECC-EEEEECCC----CCCCCCCCEEEEECCC
Q ss_conf             64443218899799-99999278----9987878379963799
Q 002740          325 LMRRCRHASASIGV-RIYIYGGL----KGDILLDDFLVAENSP  362 (885)
Q Consensus       325 p~~R~~hs~~~~~~-~Iyi~GG~----~~~~~~~D~~~ld~~~  362 (885)
                      +..+.+|+++.+++ +|||+||.    +....++++|.+|+..
T Consensus       652 ~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~  694 (695)
T 2zwa_A          652 SLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA  694 (695)
T ss_dssp             CCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred             CCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
T ss_conf             8620013689948998999959964757556136519999973


Done!