Query 002743
Match_columns 885
No_of_seqs 535 out of 3408
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:13:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002743.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002743hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 2E-185 4E-190 1502.7 44.4 874 1-885 69-942 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 2E-133 5E-138 1129.7 52.4 770 1-781 57-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-127 3E-132 1162.5 83.1 719 1-739 34-754 (755)
4 COG0474 MgtA Cation transport 100.0 5E-126 1E-130 1165.6 74.8 726 1-738 78-871 (917)
5 PRK10517 magnesium-transportin 100.0 4E-124 8E-129 1145.2 85.6 756 1-781 101-899 (902)
6 PRK15122 magnesium-transportin 100.0 3E-123 6E-128 1139.3 84.9 764 1-780 79-898 (903)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-122 2E-127 1133.6 85.8 758 1-781 67-864 (867)
8 TIGR01523 ATPase-IID_K-Na pota 100.0 5E-123 1E-127 1148.6 83.4 765 1-781 60-1049(1053)
9 TIGR01517 ATPase-IIB_Ca plasma 100.0 4E-117 9E-122 1097.0 85.0 767 1-776 94-938 (941)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 4E-117 9E-122 1099.7 83.9 776 1-779 70-985 (997)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-116 3E-121 1086.7 84.8 746 2-779 60-882 (884)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3E-116 7E-121 1084.8 84.2 775 1-778 5-917 (917)
13 KOG0204 Calcium transporting A 100.0 3E-117 7E-122 996.5 46.5 763 2-774 154-1003(1034)
14 TIGR01657 P-ATPase-V P-type AT 100.0 1E-105 2E-110 1003.7 72.1 718 1-733 172-1022(1054)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 1E-107 3E-112 918.2 29.2 778 1-780 92-1008(1019)
16 TIGR01652 ATPase-Plipid phosph 100.0 7.1E-98 2E-102 936.1 66.1 765 1-783 25-1050(1057)
17 PRK14010 potassium-transportin 100.0 5.6E-98 1E-102 875.9 57.4 543 1-601 30-588 (673)
18 PRK01122 potassium-transportin 100.0 7.8E-94 1.7E-98 841.7 62.4 534 1-590 31-581 (679)
19 PLN03190 aminophospholipid tra 100.0 1.4E-93 3.1E-98 887.8 68.3 759 6-790 116-1151(1178)
20 TIGR01497 kdpB K+-transporting 100.0 2.1E-89 4.6E-94 802.2 60.3 538 1-593 30-585 (675)
21 COG2217 ZntA Cation transport 100.0 1.4E-86 3.1E-91 779.4 57.4 527 7-597 151-680 (713)
22 KOG0206 P-type ATPase [General 100.0 7.6E-86 1.7E-90 790.6 26.3 764 7-788 62-1085(1151)
23 KOG0208 Cation transport ATPas 100.0 1.9E-82 4.1E-87 724.9 50.7 658 2-674 194-1012(1140)
24 PRK11033 zntA zinc/cadmium/mer 100.0 1.6E-81 3.4E-86 758.7 57.4 515 5-594 189-706 (741)
25 KOG0207 Cation transport ATPas 100.0 2.3E-81 5.1E-86 717.6 38.7 539 26-619 337-888 (951)
26 TIGR01494 ATPase_P-type ATPase 100.0 6.8E-79 1.5E-83 712.6 54.7 475 36-598 3-483 (499)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 4.9E-77 1.1E-81 703.4 59.3 518 7-595 3-526 (556)
28 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.1E-77 1.1E-81 699.0 57.0 500 7-595 3-505 (536)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 1.6E-76 3.5E-81 697.0 58.7 506 28-610 53-560 (562)
30 PRK10671 copA copper exporting 100.0 2.2E-75 4.8E-80 718.8 60.6 521 28-612 285-809 (834)
31 KOG0210 P-type ATPase [Inorgan 100.0 1.3E-75 2.9E-80 643.1 42.1 734 2-787 107-1048(1051)
32 KOG0209 P-type ATPase [Inorgan 100.0 3.3E-66 7.2E-71 578.8 46.8 519 3-542 198-832 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 1.2E-63 2.6E-68 536.5 34.2 518 2-575 31-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 8.2E-36 1.8E-40 314.7 24.2 221 34-255 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 2.6E-26 5.6E-31 239.0 11.3 211 259-536 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 5.7E-15 1.2E-19 133.7 10.1 123 414-567 20-145 (152)
37 KOG4383 Uncharacterized conser 99.3 2.5E-08 5.5E-13 112.0 35.0 210 411-620 813-1129(1354)
38 PF00689 Cation_ATPase_C: Cati 99.2 2.1E-10 4.5E-15 116.5 14.9 166 604-776 1-182 (182)
39 TIGR02137 HSK-PSP phosphoserin 99.0 2.7E-09 6E-14 109.9 11.3 131 424-571 68-198 (203)
40 PRK11133 serB phosphoserine ph 98.9 5.6E-09 1.2E-13 114.9 10.7 131 424-568 181-315 (322)
41 PRK01158 phosphoglycolate phos 98.9 2.1E-08 4.5E-13 105.7 13.0 145 425-569 21-226 (230)
42 TIGR00338 serB phosphoserine p 98.8 1.2E-08 2.6E-13 106.7 10.2 129 424-567 85-218 (219)
43 PRK10513 sugar phosphate phosp 98.8 3.5E-08 7.6E-13 106.7 13.0 66 504-569 196-265 (270)
44 TIGR01487 SPP-like sucrose-pho 98.8 1.6E-08 3.4E-13 105.6 9.2 144 424-567 18-214 (215)
45 PRK15126 thiamin pyrimidine py 98.8 3E-08 6.5E-13 107.4 11.7 146 424-569 19-259 (272)
46 COG0561 Cof Predicted hydrolas 98.8 6.3E-08 1.4E-12 104.4 14.0 154 417-570 12-259 (264)
47 PF13246 Hydrolase_like2: Puta 98.8 1.4E-08 3E-13 90.5 7.0 65 306-371 20-90 (91)
48 PRK10976 putative hydrolase; P 98.7 7E-08 1.5E-12 104.2 12.3 66 504-569 190-261 (266)
49 TIGR02726 phenyl_P_delta pheny 98.7 4.4E-08 9.5E-13 97.6 9.5 102 431-562 41-144 (169)
50 TIGR01482 SPP-subfamily Sucros 98.7 1E-07 2.2E-12 100.0 12.6 145 424-568 15-221 (225)
51 TIGR01670 YrbI-phosphatas 3-de 98.7 6.4E-08 1.4E-12 95.4 8.6 97 432-560 36-136 (154)
52 COG0560 SerB Phosphoserine pho 98.6 1.2E-07 2.6E-12 98.2 10.1 118 423-555 76-198 (212)
53 PLN02887 hydrolase family prot 98.6 2.3E-07 5E-12 109.2 13.2 52 518-569 525-576 (580)
54 PF08282 Hydrolase_3: haloacid 98.6 1.4E-07 3.1E-12 100.1 10.5 146 423-568 14-254 (254)
55 PRK10530 pyridoxal phosphate ( 98.6 4.8E-07 1E-11 97.9 12.5 66 504-569 199-268 (272)
56 PRK13582 thrH phosphoserine ph 98.5 5.8E-07 1.3E-11 92.9 11.3 127 424-568 68-195 (205)
57 TIGR00099 Cof-subfamily Cof su 98.5 6E-07 1.3E-11 96.4 11.2 64 504-567 188-255 (256)
58 PRK09484 3-deoxy-D-manno-octul 98.5 3.7E-07 8E-12 92.7 8.9 98 431-560 55-156 (183)
59 TIGR01486 HAD-SF-IIB-MPGP mann 98.4 1.8E-06 3.9E-11 92.7 13.3 67 504-570 176-254 (256)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 7.5E-07 1.6E-11 91.6 9.0 117 424-553 80-200 (201)
61 PRK08238 hypothetical protein; 98.4 0.00012 2.7E-09 84.9 27.7 101 424-549 72-172 (479)
62 TIGR03333 salvage_mtnX 2-hydro 98.4 2.6E-06 5.7E-11 88.8 11.4 135 423-568 69-208 (214)
63 PRK03669 mannosyl-3-phosphogly 98.3 3.2E-06 6.8E-11 91.6 12.2 67 504-570 187-266 (271)
64 PF12710 HAD: haloacid dehalog 98.3 9.2E-07 2E-11 90.2 6.5 92 427-533 92-192 (192)
65 PRK00192 mannosyl-3-phosphogly 98.3 5.3E-06 1.2E-10 89.9 12.6 66 504-569 190-267 (273)
66 KOG1615 Phosphoserine phosphat 98.3 1.5E-06 3.3E-11 85.1 6.6 109 425-542 89-199 (227)
67 COG1778 Low specificity phosph 98.2 4E-06 8.7E-11 79.6 7.2 98 431-560 42-143 (170)
68 PLN02954 phosphoserine phospha 98.2 1.5E-05 3.4E-10 83.5 12.2 131 424-566 84-221 (224)
69 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.2E-05 2.5E-10 81.7 9.3 113 423-540 71-186 (188)
70 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2.2E-05 4.8E-10 82.2 9.8 133 424-568 74-212 (219)
71 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.4E-05 3E-10 80.4 7.0 101 424-535 73-177 (177)
72 PRK13222 phosphoglycolate phos 97.9 6E-05 1.3E-09 79.0 10.2 125 423-570 92-223 (226)
73 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 3.5E-05 7.6E-10 79.4 8.1 109 422-542 85-197 (202)
74 TIGR01485 SPP_plant-cyano sucr 97.8 0.00012 2.7E-09 78.1 11.0 147 423-569 20-244 (249)
75 COG0546 Gph Predicted phosphat 97.8 0.00011 2.4E-09 77.0 9.7 126 422-568 87-217 (220)
76 cd01427 HAD_like Haloacid deha 97.7 5.7E-05 1.2E-09 71.5 6.7 118 420-540 20-138 (139)
77 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.00016 3.4E-09 74.9 9.1 124 424-568 75-203 (205)
78 TIGR02461 osmo_MPG_phos mannos 97.6 0.00022 4.7E-09 75.0 9.3 43 422-464 13-55 (225)
79 PLN02382 probable sucrose-phos 97.6 0.00054 1.2E-08 78.5 12.4 141 428-568 32-256 (413)
80 PRK10187 trehalose-6-phosphate 97.5 0.00073 1.6E-08 72.9 11.4 139 424-568 36-240 (266)
81 TIGR02471 sucr_syn_bact_C sucr 97.5 0.00014 3E-09 77.1 5.2 68 503-570 158-233 (236)
82 PRK13223 phosphoglycolate phos 97.4 0.00062 1.3E-08 73.8 9.4 125 423-568 100-229 (272)
83 PRK13288 pyrophosphatase PpaX; 97.3 0.00068 1.5E-08 70.5 8.7 124 424-568 82-210 (214)
84 TIGR02463 MPGP_rel mannosyl-3- 97.3 0.0014 3.1E-08 68.5 11.1 38 427-464 19-56 (221)
85 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00068 1.5E-08 70.3 7.8 119 424-565 85-210 (213)
86 PRK10826 2-deoxyglucose-6-phos 97.1 0.0015 3.3E-08 68.4 8.1 122 423-565 91-216 (222)
87 PRK12702 mannosyl-3-phosphogly 97.1 0.0041 9E-08 66.6 11.2 42 424-465 18-59 (302)
88 TIGR01544 HAD-SF-IE haloacid d 97.0 0.0061 1.3E-07 65.4 12.1 132 423-568 120-273 (277)
89 TIGR03351 PhnX-like phosphonat 97.0 0.0021 4.7E-08 67.0 8.7 124 423-566 86-217 (220)
90 PRK13226 phosphoglycolate phos 97.0 0.0024 5.3E-08 67.3 8.5 123 424-567 95-223 (229)
91 TIGR01422 phosphonatase phosph 96.9 0.0038 8.3E-08 66.8 9.8 97 424-538 99-196 (253)
92 PRK14502 bifunctional mannosyl 96.9 0.0049 1.1E-07 73.2 10.7 48 417-464 425-473 (694)
93 PRK11590 hypothetical protein; 96.9 0.0041 8.9E-08 64.7 9.1 108 424-544 95-204 (211)
94 PRK13225 phosphoglycolate phos 96.8 0.0078 1.7E-07 65.1 10.8 121 424-568 142-267 (273)
95 TIGR01545 YfhB_g-proteo haloac 96.8 0.0041 8.9E-08 64.6 8.2 107 424-543 94-202 (210)
96 PRK13478 phosphonoacetaldehyde 96.8 0.0069 1.5E-07 65.4 10.2 94 424-538 101-198 (267)
97 PLN03243 haloacid dehalogenase 96.7 0.0068 1.5E-07 65.1 9.4 120 424-564 109-230 (260)
98 TIGR01484 HAD-SF-IIB HAD-super 96.7 0.0048 1E-07 63.6 7.8 39 424-462 17-55 (204)
99 TIGR01548 HAD-SF-IA-hyp1 haloa 96.6 0.0021 4.6E-08 65.9 4.8 94 422-535 104-197 (197)
100 PRK14501 putative bifunctional 96.6 0.022 4.7E-07 70.5 14.1 60 503-568 656-720 (726)
101 PRK06698 bifunctional 5'-methy 96.5 0.0075 1.6E-07 70.5 8.5 123 424-570 330-455 (459)
102 PLN02770 haloacid dehalogenase 96.4 0.017 3.7E-07 61.6 9.8 117 424-559 108-228 (248)
103 PRK11587 putative phosphatase; 96.3 0.015 3.2E-07 60.8 9.0 115 424-558 83-199 (218)
104 TIGR01672 AphA HAD superfamily 96.3 0.006 1.3E-07 64.3 5.8 92 424-541 114-210 (237)
105 TIGR02253 CTE7 HAD superfamily 96.3 0.0092 2E-07 62.2 7.3 98 424-542 94-195 (221)
106 PF05116 S6PP: Sucrose-6F-phos 96.2 0.021 4.6E-07 60.9 9.8 68 503-570 164-244 (247)
107 PRK11009 aphA acid phosphatase 96.2 0.009 2E-07 63.0 6.6 90 424-541 114-210 (237)
108 COG4030 Uncharacterized protei 96.1 0.039 8.5E-07 55.9 9.9 141 425-569 84-262 (315)
109 PHA02530 pseT polynucleotide k 96.0 0.016 3.6E-07 63.6 7.6 108 421-539 184-292 (300)
110 COG4359 Uncharacterized conser 96.0 0.016 3.4E-07 57.0 6.2 111 424-540 73-183 (220)
111 TIGR01428 HAD_type_II 2-haloal 95.9 0.019 4E-07 58.9 7.0 94 424-538 92-187 (198)
112 PRK08942 D,D-heptose 1,7-bisph 95.8 0.036 7.9E-07 56.0 8.8 127 424-568 29-176 (181)
113 PLN02779 haloacid dehalogenase 95.8 0.025 5.5E-07 61.7 8.1 117 424-558 144-264 (286)
114 TIGR01662 HAD-SF-IIIA HAD-supe 95.7 0.029 6.2E-07 53.5 7.2 93 423-538 24-126 (132)
115 PLN02575 haloacid dehalogenase 95.7 0.034 7.3E-07 62.6 8.7 120 424-564 216-337 (381)
116 TIGR01990 bPGM beta-phosphoglu 95.6 0.016 3.4E-07 58.5 5.0 94 424-538 87-180 (185)
117 PF13419 HAD_2: Haloacid dehal 95.5 0.009 2E-07 59.1 2.9 97 423-538 76-172 (176)
118 TIGR02254 YjjG/YfnB HAD superf 95.5 0.031 6.7E-07 58.2 6.9 118 424-565 97-221 (224)
119 PTZ00174 phosphomannomutase; P 95.4 0.012 2.7E-07 62.7 3.5 58 499-556 181-245 (247)
120 PRK14988 GMP/IMP nucleotidase; 95.3 0.03 6.5E-07 58.8 6.1 99 424-543 93-195 (224)
121 PLN02580 trehalose-phosphatase 95.3 0.2 4.4E-06 56.4 12.8 68 497-568 291-373 (384)
122 PRK06769 hypothetical protein; 95.2 0.042 9.2E-07 55.2 6.6 98 425-540 29-134 (173)
123 TIGR01509 HAD-SF-IA-v3 haloaci 95.2 0.046 1E-06 54.8 6.9 94 424-537 85-178 (183)
124 smart00775 LNS2 LNS2 domain. T 95.1 0.11 2.4E-06 51.4 9.0 103 422-538 25-141 (157)
125 TIGR02009 PGMB-YQAB-SF beta-ph 94.9 0.034 7.3E-07 56.1 4.9 93 423-538 87-181 (185)
126 PRK09449 dUMP phosphatase; Pro 94.8 0.077 1.7E-06 55.5 7.4 121 424-568 95-222 (224)
127 PLN02940 riboflavin kinase 94.8 0.068 1.5E-06 60.8 7.5 114 424-556 93-210 (382)
128 COG2179 Predicted hydrolase of 94.7 0.23 5.1E-06 48.5 9.8 109 382-537 19-132 (175)
129 TIGR01685 MDP-1 magnesium-depe 94.5 0.11 2.5E-06 52.0 7.4 111 415-541 36-155 (174)
130 TIGR01656 Histidinol-ppas hist 94.2 0.071 1.5E-06 52.0 5.2 97 424-538 27-140 (147)
131 TIGR00213 GmhB_yaeD D,D-heptos 94.1 0.17 3.7E-06 50.9 8.0 26 425-450 27-52 (176)
132 TIGR01549 HAD-SF-IA-v1 haloaci 93.8 0.058 1.3E-06 52.7 3.8 91 424-536 64-154 (154)
133 TIGR02252 DREG-2 REG-2-like, H 93.7 0.12 2.5E-06 53.2 6.0 94 424-537 105-199 (203)
134 TIGR01668 YqeG_hyp_ppase HAD s 93.6 0.13 2.9E-06 51.4 5.9 86 423-538 42-131 (170)
135 PF06888 Put_Phosphatase: Puta 93.4 0.36 7.9E-06 50.7 9.0 101 424-531 71-184 (234)
136 smart00577 CPDc catalytic doma 93.1 0.12 2.6E-06 50.5 4.6 93 423-540 44-139 (148)
137 TIGR01261 hisB_Nterm histidino 92.9 0.13 2.8E-06 51.0 4.5 97 424-540 29-144 (161)
138 TIGR01533 lipo_e_P4 5'-nucleot 92.8 0.55 1.2E-05 50.5 9.5 86 422-532 116-204 (266)
139 TIGR00685 T6PP trehalose-phosp 92.8 0.18 3.9E-06 53.6 5.8 66 499-568 162-239 (244)
140 PRK05446 imidazole glycerol-ph 92.6 0.26 5.7E-06 55.1 7.0 96 423-538 29-143 (354)
141 PLN02811 hydrolase 92.4 0.22 4.7E-06 52.0 5.8 99 424-539 78-180 (220)
142 PLN02919 haloacid dehalogenase 92.1 0.58 1.3E-05 60.2 10.1 125 424-568 161-291 (1057)
143 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.0 0.73 1.6E-05 48.9 9.2 94 417-536 17-115 (242)
144 PLN03017 trehalose-phosphatase 91.9 3 6.5E-05 46.8 14.1 44 414-458 121-166 (366)
145 TIGR01675 plant-AP plant acid 91.7 0.81 1.8E-05 47.9 8.9 87 423-529 119-209 (229)
146 TIGR01681 HAD-SF-IIIC HAD-supe 91.5 0.56 1.2E-05 44.5 7.0 39 424-462 29-68 (128)
147 COG3769 Predicted hydrolase (H 91.5 1.3 2.8E-05 45.2 9.6 37 428-464 27-63 (274)
148 PLN02205 alpha,alpha-trehalose 91.4 0.93 2E-05 56.8 10.6 37 424-460 616-653 (854)
149 TIGR01691 enolase-ppase 2,3-di 91.3 0.31 6.8E-06 50.9 5.3 99 422-541 93-194 (220)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 90.2 0.7 1.5E-05 46.1 6.5 40 425-464 43-94 (166)
151 TIGR02247 HAD-1A3-hyp Epoxide 89.8 0.27 5.9E-06 50.8 3.4 97 423-538 93-191 (211)
152 KOG3120 Predicted haloacid deh 89.2 2.1 4.7E-05 43.8 8.9 111 424-541 84-208 (256)
153 PRK09456 ?-D-glucose-1-phospha 88.0 0.92 2E-05 46.5 5.8 95 424-539 84-181 (199)
154 PF09419 PGP_phosphatase: Mito 87.9 1.7 3.6E-05 43.3 7.2 104 386-533 36-154 (168)
155 PRK10563 6-phosphogluconate ph 87.3 0.82 1.8E-05 47.6 5.0 96 424-540 88-183 (221)
156 TIGR01686 FkbH FkbH-like domai 86.6 1.2 2.7E-05 49.4 6.2 90 424-541 31-128 (320)
157 PLN02645 phosphoglycolate phos 84.8 1.9 4.1E-05 47.7 6.5 48 417-464 37-87 (311)
158 PHA02597 30.2 hypothetical pro 84.6 1.6 3.5E-05 44.5 5.5 97 424-545 74-177 (197)
159 TIGR01993 Pyr-5-nucltdase pyri 84.0 0.99 2.2E-05 45.5 3.6 97 424-538 84-180 (184)
160 PRK10725 fructose-1-P/6-phosph 82.6 1.8 4E-05 43.5 4.9 92 426-538 90-181 (188)
161 PF13344 Hydrolase_6: Haloacid 82.1 1.2 2.5E-05 40.5 2.9 48 417-464 7-57 (101)
162 PLN02151 trehalose-phosphatase 77.9 34 0.00073 38.4 13.1 66 499-568 261-341 (354)
163 PF03767 Acid_phosphat_B: HAD 74.7 5.7 0.00012 41.8 5.8 89 424-531 115-207 (229)
164 PLN02177 glycerol-3-phosphate 72.0 9.9 0.00021 44.8 7.4 98 425-543 111-215 (497)
165 TIGR01680 Veg_Stor_Prot vegeta 72.0 21 0.00046 38.3 9.1 88 422-529 143-235 (275)
166 PLN02423 phosphomannomutase 71.1 5.9 0.00013 42.1 5.0 43 503-546 188-235 (245)
167 PF08235 LNS2: LNS2 (Lipin/Ned 71.1 18 0.00039 35.6 7.8 103 423-538 26-141 (157)
168 COG0637 Predicted phosphatase/ 70.9 8 0.00017 40.4 5.8 98 423-539 85-182 (221)
169 PRK10444 UMP phosphatase; Prov 69.5 5.2 0.00011 42.7 4.1 45 417-461 10-54 (248)
170 TIGR01684 viral_ppase viral ph 69.0 7.8 0.00017 42.0 5.2 41 425-465 146-187 (301)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 67.5 6.9 0.00015 42.0 4.6 48 417-464 10-64 (257)
172 KOG3040 Predicted sugar phosph 67.4 10 0.00023 38.6 5.3 47 414-460 13-59 (262)
173 PHA03398 viral phosphatase sup 67.2 9.3 0.0002 41.5 5.4 41 425-465 148-189 (303)
174 PRK10748 flavin mononucleotide 65.8 8.3 0.00018 40.7 4.8 90 424-540 113-205 (238)
175 TIGR01457 HAD-SF-IIA-hyp2 HAD- 64.8 11 0.00024 40.2 5.5 48 417-464 10-60 (249)
176 TIGR01493 HAD-SF-IA-v2 Haloaci 64.0 7.9 0.00017 38.4 4.0 86 424-535 90-175 (175)
177 COG1011 Predicted hydrolase (H 63.7 18 0.00039 37.4 6.8 41 424-465 99-139 (229)
178 COG0241 HisB Histidinol phosph 61.9 21 0.00047 35.9 6.5 98 425-541 32-146 (181)
179 TIGR02251 HIF-SF_euk Dullard-l 60.0 7.2 0.00016 38.6 2.8 42 422-464 40-81 (162)
180 TIGR01458 HAD-SF-IIA-hyp3 HAD- 59.1 6 0.00013 42.4 2.2 118 427-567 123-253 (257)
181 TIGR02244 HAD-IG-Ncltidse HAD 57.0 34 0.00073 38.3 7.6 37 426-462 186-223 (343)
182 TIGR01647 ATPase-IIIA_H plasma 56.6 1.1E+02 0.0025 38.2 13.1 184 46-239 69-262 (755)
183 TIGR01663 PNK-3'Pase polynucle 56.6 29 0.00063 41.1 7.4 40 425-464 198-249 (526)
184 PRK01122 potassium-transportin 53.2 2E+02 0.0043 35.5 14.0 81 31-120 64-147 (679)
185 TIGR01689 EcbF-BcbF capsule bi 52.4 16 0.00034 34.6 3.6 32 423-454 23-54 (126)
186 COG3700 AphA Acid phosphatase 51.9 16 0.00035 36.2 3.5 90 425-541 115-210 (237)
187 PF13380 CoA_binding_2: CoA bi 51.1 14 0.0003 34.4 2.9 78 382-463 19-103 (116)
188 PTZ00445 p36-lilke protein; Pr 50.6 34 0.00073 35.4 5.8 63 376-451 28-102 (219)
189 PRK14194 bifunctional 5,10-met 50.4 83 0.0018 34.5 9.1 141 421-561 12-212 (301)
190 cd04728 ThiG Thiazole synthase 49.3 3.5E+02 0.0076 28.7 14.8 52 409-460 89-143 (248)
191 TIGR00262 trpA tryptophan synt 48.6 1.1E+02 0.0024 32.7 9.8 39 423-461 123-163 (256)
192 PRK00208 thiG thiazole synthas 46.7 3.9E+02 0.0084 28.5 15.0 52 409-460 89-143 (250)
193 PTZ00174 phosphomannomutase; P 45.9 30 0.00064 36.7 4.9 34 424-457 22-55 (247)
194 PF05822 UMPH-1: Pyrimidine 5' 45.7 78 0.0017 33.6 7.8 134 423-568 89-241 (246)
195 PF00122 E1-E2_ATPase: E1-E2 A 45.5 1.2E+02 0.0026 31.4 9.4 193 38-240 2-211 (230)
196 PRK05585 yajC preprotein trans 45.1 1.9E+02 0.0041 26.5 9.2 46 28-73 17-62 (106)
197 PRK11507 ribosome-associated p 44.7 26 0.00055 29.5 3.2 26 69-94 38-63 (70)
198 COG0647 NagD Predicted sugar p 44.4 27 0.00058 37.7 4.2 46 416-461 16-61 (269)
199 TIGR01452 PGP_euk phosphoglyco 43.0 27 0.00058 37.9 4.1 48 417-464 11-61 (279)
200 TIGR01517 ATPase-IIB_Ca plasma 42.9 1.3E+02 0.0028 38.8 10.7 33 87-119 174-207 (941)
201 PF10777 YlaC: Inner membrane 42.1 49 0.0011 31.9 5.0 50 716-772 33-82 (155)
202 PRK09479 glpX fructose 1,6-bis 41.0 80 0.0017 34.5 7.0 104 419-533 161-282 (319)
203 PRK14179 bifunctional 5,10-met 40.7 99 0.0021 33.6 7.8 137 422-558 11-208 (284)
204 PRK14188 bifunctional 5,10-met 40.5 1.1E+02 0.0023 33.7 8.1 44 422-465 11-64 (296)
205 CHL00200 trpA tryptophan synth 40.4 1.1E+02 0.0024 32.9 8.2 31 502-532 187-217 (263)
206 PF12689 Acid_PPase: Acid Phos 39.8 1.1E+02 0.0024 30.6 7.5 40 425-464 46-86 (169)
207 PLN02591 tryptophan synthase 39.5 1.4E+02 0.003 31.9 8.7 28 502-529 174-201 (250)
208 PF13275 S4_2: S4 domain; PDB: 39.1 18 0.00039 29.9 1.5 25 69-93 34-58 (65)
209 COG0279 GmhA Phosphoheptose is 38.9 76 0.0016 31.4 5.9 58 371-452 91-148 (176)
210 cd01516 FBPase_glpX Bacterial 37.4 1E+02 0.0022 33.6 7.1 106 419-534 158-280 (309)
211 PF11694 DUF3290: Protein of u 35.9 93 0.002 30.4 6.1 68 26-95 43-117 (149)
212 COG1188 Ribosome-associated he 35.8 40 0.00087 30.4 3.2 32 66-98 32-63 (100)
213 PRK12415 fructose 1,6-bisphosp 34.6 1.1E+02 0.0025 33.5 7.0 106 419-534 159-281 (322)
214 PF05975 EcsB: Bacterial ABC t 33.6 7.6E+02 0.016 28.1 17.5 22 575-596 13-34 (386)
215 PRK11840 bifunctional sulfur c 33.4 76 0.0017 35.0 5.6 51 410-460 164-217 (326)
216 TIGR00739 yajC preprotein tran 33.3 2.7E+02 0.0058 24.4 7.9 26 48-73 22-47 (84)
217 PRK10671 copA copper exporting 32.5 4.6E+02 0.0099 33.3 13.2 99 35-144 289-394 (834)
218 TIGR01456 CECR5 HAD-superfamil 32.5 1.4E+02 0.0031 33.0 7.8 48 417-464 9-64 (321)
219 PRK14174 bifunctional 5,10-met 31.9 1.7E+02 0.0037 32.0 8.0 44 422-465 10-63 (295)
220 TIGR01657 P-ATPase-V P-type AT 31.5 1.3E+03 0.028 30.2 18.7 217 36-277 197-450 (1054)
221 TIGR00330 glpX fructose-1,6-bi 31.3 1.5E+02 0.0033 32.3 7.2 38 419-458 158-195 (321)
222 TIGR01494 ATPase_P-type ATPase 31.2 2.4E+02 0.0052 33.3 9.9 147 72-237 53-212 (499)
223 PF12710 HAD: haloacid dehalog 30.3 26 0.00055 35.1 1.3 14 262-275 1-14 (192)
224 PF06506 PrpR_N: Propionate ca 28.7 2.1E+02 0.0046 28.5 7.6 106 428-580 65-172 (176)
225 PF03120 DNA_ligase_OB: NAD-de 28.6 32 0.0007 29.9 1.4 22 79-100 45-67 (82)
226 PRK14189 bifunctional 5,10-met 28.6 1.8E+02 0.004 31.6 7.5 139 421-559 11-209 (285)
227 TIGR02250 FCP1_euk FCP1-like p 28.5 81 0.0018 31.0 4.5 43 422-465 56-98 (156)
228 TIGR01459 HAD-SF-IIA-hyp4 HAD- 28.1 29 0.00063 36.6 1.3 91 426-538 140-236 (242)
229 PRK14172 bifunctional 5,10-met 28.1 2.6E+02 0.0057 30.3 8.5 137 422-558 11-208 (278)
230 PF01455 HupF_HypC: HupF/HypC 27.6 1.3E+02 0.0028 25.2 4.8 33 65-97 16-51 (68)
231 PRK12388 fructose-1,6-bisphosp 27.1 1.9E+02 0.0042 31.6 7.2 38 419-458 158-195 (321)
232 PRK14184 bifunctional 5,10-met 26.8 2.8E+02 0.0061 30.2 8.5 137 422-558 10-211 (286)
233 PF00389 2-Hacid_dh: D-isomer 25.6 5.5E+02 0.012 23.9 10.7 36 506-542 52-89 (133)
234 PF14336 DUF4392: Domain of un 25.5 1.4E+02 0.0031 32.6 6.1 38 427-464 63-101 (291)
235 PRK11033 zntA zinc/cadmium/mer 25.4 5.9E+02 0.013 31.9 12.2 74 38-121 212-286 (741)
236 PRK15424 propionate catabolism 25.4 5.9E+02 0.013 30.5 11.6 69 428-526 95-164 (538)
237 PRK09140 2-dehydro-3-deoxy-6-p 25.4 6.5E+02 0.014 25.9 10.7 146 377-544 22-181 (206)
238 TIGR00612 ispG_gcpE 1-hydroxy- 24.7 1.6E+02 0.0034 32.7 6.0 148 375-545 149-319 (346)
239 cd05017 SIS_PGI_PMI_1 The memb 24.7 1.1E+02 0.0024 28.3 4.4 37 425-463 55-91 (119)
240 KOG0205 Plasma membrane H+-tra 24.3 8.5 0.00018 45.4 -3.7 205 387-591 392-650 (942)
241 TIGR01460 HAD-SF-IIA Haloacid 24.3 95 0.002 32.7 4.4 34 417-450 7-40 (236)
242 PF15584 Imm44: Immunity prote 24.2 34 0.00073 30.2 0.7 20 86-105 13-32 (94)
243 PRK10517 magnesium-transportin 23.5 1.5E+03 0.032 29.1 15.5 84 37-125 127-212 (902)
244 cd04724 Tryptophan_synthase_al 23.1 3.7E+02 0.0079 28.4 8.5 37 427-463 116-155 (242)
245 PRK14169 bifunctional 5,10-met 23.1 1.5E+02 0.0033 32.2 5.6 44 422-465 10-62 (282)
246 COG0474 MgtA Cation transport 23.0 4.3E+02 0.0093 34.0 10.5 226 6-237 87-330 (917)
247 PRK14175 bifunctional 5,10-met 22.9 1.4E+02 0.0031 32.5 5.4 45 421-465 11-64 (286)
248 COG0272 Lig NAD-dependent DNA 22.9 1.5E+02 0.0032 36.0 5.8 66 80-155 364-432 (667)
249 PRK14170 bifunctional 5,10-met 22.5 1.3E+02 0.0028 32.8 4.9 45 421-465 10-63 (284)
250 TIGR01524 ATPase-IIIB_Mg magne 22.4 1.5E+03 0.033 28.9 15.2 81 37-122 93-175 (867)
251 TIGR01116 ATPase-IIA1_Ca sarco 21.6 1.8E+03 0.039 28.4 17.5 20 74-93 94-113 (917)
252 PF13242 Hydrolase_like: HAD-h 21.6 1.2E+02 0.0027 25.3 3.8 49 508-556 13-69 (75)
253 COG2179 Predicted hydrolase of 21.5 1.6E+02 0.0034 29.4 4.7 82 377-464 49-133 (175)
254 PF07287 DUF1446: Protein of u 20.9 3.5E+02 0.0077 30.6 8.1 40 425-464 56-100 (362)
255 PF02219 MTHFR: Methylenetetra 20.2 85 0.0018 34.2 3.1 40 413-452 71-111 (287)
256 cd00860 ThrRS_anticodon ThrRS 20.2 1.8E+02 0.0039 24.8 4.7 47 418-464 6-53 (91)
257 PF02358 Trehalose_PPase: Treh 20.2 83 0.0018 33.0 2.9 56 504-559 165-234 (235)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-185 Score=1502.73 Aligned_cols=874 Identities=88% Similarity=1.328 Sum_probs=860.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
||||++|+|++||++++.+.+++++|+||.||++|++++++|++++|+||++|+++.++|++.++|+++|+|||+|.+++
T Consensus 69 m~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~e 148 (942)
T KOG0205|consen 69 MWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQE 148 (942)
T ss_pred HhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeee
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHh
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 160 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~ 160 (885)
+++||||||+.++.||+||||+||++|+.++||||+|||||.||+|++||.+|+||+|++|+++++|++||.+|++||.+
T Consensus 149 As~lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA 228 (942)
T KOG0205|consen 149 ASILVPGDILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (942)
T ss_pred ccccccCceeeeccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHh
Q 002743 161 HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240 (885)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l 240 (885)
++++++++.+|||+.++.|+++|++++++++++.++++|+.+.+.|+..+.+.+++++.++|++||.++++++++|+.||
T Consensus 229 ~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL 308 (942)
T KOG0205|consen 229 HLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308 (942)
T ss_pred HhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCC
Q 002743 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLAD 320 (885)
Q Consensus 241 ~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~ 320 (885)
+++|+++|+++++|+|+++|++|+|||||||.|+++|++..++.+.++.++|+++..|+++++.+++|++|.|+++++.|
T Consensus 309 aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~d 388 (942)
T KOG0205|consen 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLAD 388 (942)
T ss_pred HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred hHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeee
Q 002743 321 PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQE 400 (885)
Q Consensus 321 ~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~ 400 (885)
|++++.+|++++++||||.+||.+..|.++||++++++||||++|+++|+.++++++++++.+++|+++|+|.|++|++.
T Consensus 389 PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~ 468 (942)
T KOG0205|consen 389 PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQE 468 (942)
T ss_pred HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCccccc
Q 002743 401 IPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480 (885)
Q Consensus 401 ~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~ 480 (885)
.+++.++..+.+|+|+|+..+.||||+|+.++|.+....|++|+|+|||+...+++++|++|+.+|++++..+.|.+.++
T Consensus 469 v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~ 548 (942)
T KOG0205|consen 469 VPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG 548 (942)
T ss_pred cccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 481 ~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.+.+.++++++++++.||.++||||+++|+.||++||.|+|+|||+||+||||+||+|||+.+++|+||.+||+|+++++
T Consensus 549 ~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepg 628 (942)
T KOG0205|consen 549 SMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (942)
T ss_pred CCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhhccccccccCCCCCCCCCCcc
Q 002743 561 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSW 640 (885)
Q Consensus 561 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~~~~~~ 640 (885)
++.|+.++..+|.+|+||++|.+|+++.++.+++++++..+.|.|.|+|++++++.++||++.|++++|+++|+|.|++|
T Consensus 629 lSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdsw 708 (942)
T KOG0205|consen 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSW 708 (942)
T ss_pred chhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccchh
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~ 720 (885)
+++++|..++++|.|+++++..+||..+.+.||+..||+.....+..+...+.|+++++.+++++|++|+++|+|.++|+
T Consensus 709 kl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg 788 (942)
T KOG0205|consen 709 KLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPG 788 (942)
T ss_pred chhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcH
Confidence 99999999999999999999999999999999999999988877888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhcCcchhhhhhhccccccccc
Q 002743 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKK 800 (885)
Q Consensus 721 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~ 800 (885)
++++.+++.++++++++++|++|.|.+.++++|.|..++|+++++.++++++.|+..||.+++++|++.++++++++.|+
T Consensus 789 ~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk 868 (942)
T KOG0205|consen 789 WLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKK 868 (942)
T ss_pred HHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHhhhhhcCCCCCCcccccCCccchhhhHHHHHHHHhHHHHHHhhhccccccchhhhhhcCCChhhhh
Q 002743 801 DYGKEEREAQWAAAQRTLHGLQPPETNGIFSDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQ 880 (885)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (885)
+|++++|+++|+.+||++|+.+.++. +|++++++++|||+|++|+|++|++++|+||++|+||+|+|++
T Consensus 869 ~~~~~~~~a~~~~~qrt~~~lq~~~~----------~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~- 937 (942)
T KOG0205|consen 869 DYGKEEREAQWALAQRTLHGLQPPEG----------RELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI- 937 (942)
T ss_pred ccchhhhhhHHHHhhhhhcccCCCcc----------chhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-
Confidence 99999999999999999999999852 7889999999999999999999999999999999999999999
Q ss_pred ccccC
Q 002743 881 QHYTV 885 (885)
Q Consensus 881 ~~~~~ 885 (885)
|||||
T Consensus 938 ~~~t~ 942 (942)
T KOG0205|consen 938 QHYTV 942 (942)
T ss_pred hhccC
Confidence 99997
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-133 Score=1129.69 Aligned_cols=770 Identities=28% Similarity=0.420 Sum_probs=631.9
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|.||++.+|++||++||++. .|.|++.|.+++++|++++++||||++|++++|+++.||.++|+|+|+.+.++
T Consensus 57 F~n~Li~iLL~sA~ISfvl~-------~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~ 129 (972)
T KOG0202|consen 57 FDNPLILILLLSAAISFVLA-------DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHIL 129 (972)
T ss_pred HHhHHHHHHHHHHHHHHHHH-------hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCccccee
Confidence 57999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC--------------CCcccccceeeeCeEEEE
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAV 146 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gs~v~~G~~~~~ 146 (885)
+++|||||||.|+-||+||||.||++..++.||||.|||||.|+.|+. .|++|+||.|..|.++|+
T Consensus 130 A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GI 209 (972)
T KOG0202|consen 130 ARELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGI 209 (972)
T ss_pred hhccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEE
Confidence 999999999999999999999999999899999999999999999954 257999999999999999
Q ss_pred EEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhc---c-c---cchHhHHHHHHHH
Q 002743 147 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVL 216 (885)
Q Consensus 147 V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~l~l 216 (885)
|+.||.+|++|++.+.++..+ .++|+|+.++.+++.+.-.+.+..+..+++ .|+. . + ..+.+.|..++++
T Consensus 210 Vi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsL 289 (972)
T KOG0202|consen 210 VIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSL 289 (972)
T ss_pred EEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHH
Confidence 999999999999999998874 699999999999998653222222222222 2221 1 2 4455678888999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecc----------
Q 002743 217 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---------- 286 (885)
Q Consensus 217 lv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~---------- 286 (885)
.+++||++||+++++++++|.+||+|++++||++.++|+||.+++||||||||||+|+|++.++++....
T Consensus 290 AVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~t 369 (972)
T KOG0202|consen 290 AVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPT 369 (972)
T ss_pred HHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999998753111
Q ss_pred -cCC------------------ChH---HHHHHHHHHccC------c-----CCChHHHHHHHhcC-----ChHH-----
Q 002743 287 -KGV------------------EKE---HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE----- 323 (885)
Q Consensus 287 -~~~------------------~~~---~~l~~a~~~~~~------~-----~~~~~~~al~~~~~-----~~~~----- 323 (885)
.++ ..+ ++...++.|+.. . .++|.|.|+...+. +...
T Consensus 370 g~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~ 449 (972)
T KOG0202|consen 370 GTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSN 449 (972)
T ss_pred CceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccc
Confidence 001 111 233333333311 1 35788988876542 1110
Q ss_pred ---------HhcCCceEEeecCCCCCccEEEEEEcCCCc--EEEEEcCcHHHHHHhccC------------ChHHHHHHH
Q 002743 324 ---------ARAGVREVHFLPFNPVDKRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVH 380 (885)
Q Consensus 324 ---------~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~ 380 (885)
....++...++||++++|+|++.+.+..|+ +..|.|||+|.|+++|+. ++..++.+.
T Consensus 450 ~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il 529 (972)
T KOG0202|consen 450 EEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL 529 (972)
T ss_pred cccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH
Confidence 112234558999999999999999876664 789999999999999953 345688899
Q ss_pred HHHHHHHHcCCeEEEEEeeecCC-----------CCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCC
Q 002743 381 AVIDKFAERGLRSLGVARQEIPE-----------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 449 (885)
Q Consensus 381 ~~~~~~a~~Glr~l~~a~~~~~~-----------~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD 449 (885)
+...+|+++|||+|++|+++.+. ..+...|++|+|+|++++.||||++++++|+.|+++||+|+|+|||
T Consensus 530 ~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD 609 (972)
T KOG0202|consen 530 ANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGD 609 (972)
T ss_pred HHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999999997763 1244578999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhCCCCCC--CCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcC
Q 002743 450 QLAIGKETGRRLGMGTNM--YPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 527 (885)
Q Consensus 450 ~~~tA~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~N 527 (885)
+.+||.+|||++|+..+. .....++|.+.+ .++++++++...+..+|+|++|+||.+||+.||++|++|+|||||+|
T Consensus 610 ~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVN 688 (972)
T KOG0202|consen 610 NKETAEAIAREIGIFSEDEDVSSMALTGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVN 688 (972)
T ss_pred CHHHHHHHHHHhCCCcCCccccccccchhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCcc
Confidence 999999999999997543 244667777766 78999999999999999999999999999999999999999999999
Q ss_pred ChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcC
Q 002743 528 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-MLIALIWKF 605 (885)
Q Consensus 528 Da~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~-~~~~~~~~~ 605 (885)
|+||||+|||||||| +|||+||+|||+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+.++ +...+..+.
T Consensus 689 DApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~ 768 (972)
T KOG0202|consen 689 DAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPE 768 (972)
T ss_pred chhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCC
Confidence 999999999999999 999999999999999999999999999999999999999999999999766555 446677899
Q ss_pred CCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 002743 606 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 677 (885)
Q Consensus 606 ~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 677 (885)
|+.|+|+||+|+++|++ +++|+++++++. ++|.++ ....++...+..|.|+.+.++..|++.+... ....
T Consensus 769 pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~v 846 (972)
T KOG0202|consen 769 PLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKV 846 (972)
T ss_pred cccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCc
Confidence 99999999999999998 699999987653 222222 2344555556679999988885554433210 1111
Q ss_pred Ccccc------CC----------CHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHHH
Q 002743 678 GVRSL------RT----------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIA 738 (885)
Q Consensus 678 g~~~~------~~----------~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~ 738 (885)
..+.. .. ......|+.|..+++...++.+++|+.+.+.+.. .|.|+++|+.++++... ..
T Consensus 847 t~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f-~i 925 (972)
T KOG0202|consen 847 TYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHF-LV 925 (972)
T ss_pred ChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhh-eE
Confidence 00000 00 0011237788888999999999999987554332 24489999998876644 44
Q ss_pred Hhhc--ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002743 739 VYAN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 739 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
+|.+ ...+++.+++|.-|++++.++..+++++|++|++.|++.
T Consensus 926 lYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 926 LYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred EEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 6654 223467888887777778999999999999999988764
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.5e-127 Score=1162.51 Aligned_cols=719 Identities=60% Similarity=0.944 Sum_probs=644.6
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|+||+.|+|+++++++++++ +|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||++++|+
T Consensus 34 ~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~ 106 (755)
T TIGR01647 34 FWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIP 106 (755)
T ss_pred HhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEE
Confidence 68999999999999999997 89999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHh
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 160 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~ 160 (885)
++||||||+|.+++||+|||||+|++|+++.||||+|||||.|+.|++||.+|+||.|.+|+++++|++||.+|++||++
T Consensus 107 ~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~ 186 (755)
T TIGR01647 107 ASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAA 186 (755)
T ss_pred hhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHH
Confidence 99999999999999999999999999977999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Q 002743 161 HLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 239 (885)
Q Consensus 161 ~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~ 239 (885)
+++++++ +++++|+.+++++++++..+++.+++.+++.+...+.++.+++..++++++++|||+||++++++++.|+++
T Consensus 187 ~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r 266 (755)
T TIGR01647 187 ALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAE 266 (755)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHH
Confidence 9998875 678999999999988766544433333333333256788899999999999999999999999999999999
Q ss_pred hhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcC
Q 002743 240 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 319 (885)
Q Consensus 240 l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~ 319 (885)
|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++.. ...+.+.++++.+++.++....+||+|.|+++++.
T Consensus 267 ~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 267 LAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAK 344 (755)
T ss_pred HHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998763 22236677888888877666667999999999877
Q ss_pred ChHHHhcCCceEEeecCCCCCccEEEEEEcCC-CcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEe
Q 002743 320 DPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVAR 398 (885)
Q Consensus 320 ~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~ 398 (885)
+....+..++.++++||++.+|+|++++.+++ |+.+.++||+||.++++|++..+.++++++.+++++++|+|++++|+
T Consensus 345 ~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~ 424 (755)
T TIGR01647 345 DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVAR 424 (755)
T ss_pred HhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEE
Confidence 65545567889999999999999999887654 77788999999999999987777778888999999999999999999
Q ss_pred eecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCccc
Q 002743 399 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 478 (885)
Q Consensus 399 ~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~ 478 (885)
++ .|++|+|+|+++++||||||++++|++||++||+++|+|||++.||+++|+++||..+.+....+...+.
T Consensus 425 ~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~ 496 (755)
T TIGR01647 425 TD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN 496 (755)
T ss_pred Ec--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcc
Confidence 73 2678999999999999999999999999999999999999999999999999999765444444433334
Q ss_pred ccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcC
Q 002743 479 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 558 (885)
Q Consensus 479 ~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~ 558 (885)
.+.++++++++.+++.++|||++|+||+++|+.||++|++|+|+|||+||+||||+|||||||++|+|+||++||+||++
T Consensus 497 ~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 497 RDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTE 576 (755)
T ss_pred hhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEc
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhhccccccccCCCCCCCCCC
Q 002743 559 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPD 638 (885)
Q Consensus 559 ~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~~~~ 638 (885)
|+|++|+.++++||++|+||+||+.|.++.|+..++.+++..+.++++++|+|++|+++++|++++++++|+++|+++|+
T Consensus 577 d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~ 656 (755)
T TIGR01647 577 PGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQ 656 (755)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCC
Confidence 99999999999999999999999999999999988777776666778899999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc
Q 002743 639 SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 718 (885)
Q Consensus 639 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~ 718 (885)
+|+.++++..++.+|.++++.++.+||+.+...++...++. .....+.+|++|+.+++.+++++|++|+++.+|.++
T Consensus 657 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~ 733 (755)
T TIGR01647 657 RWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLLHGNLQSLIYLQVSISGQATIFVTRTHGFFWSER 733 (755)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---cccHhhhHHHHHHHHHHHHHHHHheeccCCCCcccC
Confidence 99999999999999999999999888776642222111111 113457889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 002743 719 PGLLLATAFVIAQLVATFIAV 739 (885)
Q Consensus 719 ~~~~l~~~~~~~~~~~~~~~~ 739 (885)
|++++++++++.++++++++.
T Consensus 734 p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 734 PGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred CcHHHHHHHHHHHHHHHHHhh
Confidence 999999999999888877754
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-126 Score=1165.56 Aligned_cols=726 Identities=32% Similarity=0.511 Sum_probs=616.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeE
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRW 76 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~ 76 (885)
|+||+.++|+++++++++++ +| .+...|++++++|++++++||+++++++++|+++.+++++|+|||++
T Consensus 78 f~~~~~~iL~~~a~~s~~~~-------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~ 150 (917)
T COG0474 78 FKDPFIILLLVAALLSAFVG-------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF 150 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhh-------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE
Confidence 57999999999999999998 77 56779999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC--------------CCcccccceeeeCe
Q 002743 77 SEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGE 142 (885)
Q Consensus 77 ~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gs~v~~G~ 142 (885)
++|+++||||||||.+++||+||||++|+++++++||||+|||||+|+.|.+ .|++|+||.+.+|+
T Consensus 151 ~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~ 230 (917)
T COG0474 151 VEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGR 230 (917)
T ss_pred EEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcce
Confidence 9999999999999999999999999999999888999999999999999963 47899999999999
Q ss_pred EEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHc
Q 002743 143 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGI 221 (885)
Q Consensus 143 ~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~i 221 (885)
+.++|++||.+|++|+++.++... ...+|+|+.+++++.++..+.+++.++.+++.++..+..|...+..+++++++++
T Consensus 231 ~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~I 310 (917)
T COG0474 231 AKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAV 310 (917)
T ss_pred EEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988 6899999999999988766555544444444433323448899999999999999
Q ss_pred CCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCC------h---H
Q 002743 222 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---E 292 (885)
Q Consensus 222 P~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~ 292 (885)
|++||+.+++++++|+.+|+++++++|+++++|+||++|+||||||||||+|+|+|.+++...-....+ . .
T Consensus 311 PegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~ 390 (917)
T COG0474 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALL 390 (917)
T ss_pred ccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHH
Confidence 999999999999999999999999999999999999999999999999999999999998752011111 0 1
Q ss_pred HHHHHHHHHcc--Cc------CCChHHHHHHHhcC------ChHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEE
Q 002743 293 HVILLAARASR--TE------NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 358 (885)
Q Consensus 293 ~~l~~a~~~~~--~~------~~~~~~~al~~~~~------~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~ 358 (885)
+.+..++.|+. .. .+||+|.|++..+. +.......+++++++||||.+|||++++++.+|+++.++
T Consensus 391 ~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~ 470 (917)
T COG0474 391 RFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFV 470 (917)
T ss_pred HHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEE
Confidence 23444445542 22 46999999999874 344455667889999999999999999997788899999
Q ss_pred cCcHHHHHHhccC-------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC----CCCCCCceeeEeeccCCCCCc
Q 002743 359 KGAPEQILALCNC-------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRH 427 (885)
Q Consensus 359 KGa~e~il~~~~~-------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~----~~~e~~l~llG~i~i~D~lr~ 427 (885)
|||||.|+++|+. .++.++.+.+..++|+++|||++++|||..+..+. +..|++|+|+|+++|+||||+
T Consensus 471 KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~ 550 (917)
T COG0474 471 KGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPRE 550 (917)
T ss_pred cCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCc
Confidence 9999999999974 45667889999999999999999999998766543 578999999999999999999
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHH
Q 002743 428 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYE 507 (885)
Q Consensus 428 ~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 507 (885)
|++++|+.|+++||++||+||||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||++|+||.+
T Consensus 551 ~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~ 629 (917)
T COG0474 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKAR 629 (917)
T ss_pred cHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHH
Confidence 9999999999999999999999999999999999987654333355666555 777889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHH
Q 002743 508 IVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 586 (885)
Q Consensus 508 iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 586 (885)
+|+.||++||+|+|||||+||+||||+|||||||| +|+|+||+|||+++++++|++|+.+|+|||++|+|++|++.|.+
T Consensus 630 IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l 709 (917)
T COG0474 630 IVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLL 709 (917)
T ss_pred HHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhc-CCCcHHHHHHHHHHhhcc-ccccccCCC-----C-CCCCCCc--ccHHHHHHHHHHHHHH
Q 002743 587 SITIRIVLGFMLIAL-IWK-FDFSPFMVLIIAILNDGT-IMTISKDRV-----K-PSPQPDS--WKLKEIFATGVVLGSY 655 (885)
Q Consensus 587 ~~ni~~~~~~~~~~~-~~~-~~~~~~~il~i~i~~d~~-~~~l~~d~~-----~-~~~~~~~--~~~~~~~~~~~~~g~~ 655 (885)
++|+..++.++++.+ .++ .||+|+|++|+|+++|++ +++++.+++ + |+++|.+ |+.+.++.+.+..|..
T Consensus 710 ~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~ 789 (917)
T COG0474 710 SKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLL 789 (917)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHH
Confidence 999986666665544 344 689999999999999986 577766642 2 2234555 7777777778887888
Q ss_pred HHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc---hhHHHHHHHHHHHH
Q 002743 656 LAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQL 732 (885)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~ 732 (885)
.++.+++.|.+.+.... ....+... .....+++.|+.+++++.++.+..|+.+.+|++. +++.+++++++..+
T Consensus 790 ~~i~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 865 (917)
T COG0474 790 SAILFILTFLLYLLGFI-ANTLGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIII 865 (917)
T ss_pred HHHHHHHHHHHHHHhcc-ccccchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHH
Confidence 88888776666553211 11111000 1556789999999999999999999987655544 45566666666655
Q ss_pred HHHHHH
Q 002743 733 VATFIA 738 (885)
Q Consensus 733 ~~~~~~ 738 (885)
+..+..
T Consensus 866 l~l~~~ 871 (917)
T COG0474 866 LQLLII 871 (917)
T ss_pred HHHHHH
Confidence 544443
No 5
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.9e-124 Score=1145.21 Aligned_cols=756 Identities=27% Similarity=0.412 Sum_probs=632.3
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC------C
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------G 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd------g 74 (885)
|+||+.++|+++++++++++ +|.++++|++++++|.+++++||+|+++++++|+++.+++++|+|| |
T Consensus 101 ~~~p~~~lL~~aa~ls~~~~-------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g 173 (902)
T PRK10517 101 YRNPFNILLTILGAISYATE-------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGEN 173 (902)
T ss_pred HHhHHHHHHHHHHHHHHHHc-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCC
Confidence 68999999999999999997 9999999999999999999999999999999999999999999999 7
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC-------------cccccceeeeC
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQG 141 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gs~v~~G 141 (885)
++++|++++|||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|
T Consensus 174 ~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G 253 (902)
T PRK10517 174 GWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSG 253 (902)
T ss_pred eEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeee
Confidence 89999999999999999999999999999999988999999999999999999874 79999999999
Q ss_pred eEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHH
Q 002743 142 EIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGG 220 (885)
Q Consensus 142 ~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~ 220 (885)
++.++|++||.+|++||+++++++. .+++++|+.+++++++++.+.++...+.++ .+.+...+|.+++..++++++++
T Consensus 254 ~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~ 332 (902)
T PRK10517 254 TAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGL 332 (902)
T ss_pred eEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876 578999999999988765444332222222 22233457888999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHH
Q 002743 221 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 300 (885)
Q Consensus 221 iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~ 300 (885)
|||+||++++++++.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.
T Consensus 333 ~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l 409 (902)
T PRK10517 333 TPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWL 409 (902)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999987631 223455677777776
Q ss_pred HccCc--CCChHHHHHHHhcCCh--HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC-----
Q 002743 301 ASRTE--NQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----- 371 (885)
Q Consensus 301 ~~~~~--~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----- 371 (885)
++... .+||+|.|++.++... ......++.++++||||.+|+|++++.+.++.+..++||+||.++++|+.
T Consensus 410 ~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 489 (902)
T PRK10517 410 NSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNG 489 (902)
T ss_pred cCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCC
Confidence 55432 4699999999887532 22345688899999999999999998777777889999999999999963
Q ss_pred -----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeE
Q 002743 372 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNV 443 (885)
Q Consensus 372 -----~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v 443 (885)
+++.++++.+..++++++|+|++++||++++..+. ...|++++|+|+++++||||||++++|++|+++||+|
T Consensus 490 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v 569 (902)
T PRK10517 490 EIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTV 569 (902)
T ss_pred CeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEE
Confidence 22345667778899999999999999998764322 1237799999999999999999999999999999999
Q ss_pred EEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEc
Q 002743 444 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTG 523 (885)
Q Consensus 444 ~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miG 523 (885)
+|+||||+.||.++|+++||.. ..++.|.+.+ .++++++++.+++.++|||++|+||.++|+.||++|++|+|||
T Consensus 570 ~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~G 644 (902)
T PRK10517 570 KILTGDSELVAAKVCHEVGLDA----GEVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMG 644 (902)
T ss_pred EEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEEC
Confidence 9999999999999999999952 3456666655 7889999999999999999999999999999999999999999
Q ss_pred CCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002743 524 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW 603 (885)
Q Consensus 524 DG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~ 603 (885)
||+||+||||+||||||||+|+|+||++||+||++|+|++|++++++||++|+||+|++.|.++.|+..++.+++..+++
T Consensus 645 DGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 645 DGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777766666
Q ss_pred c-CCCcHHHHHHHHHHhhccccccccCCCCCC--CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCcc
Q 002743 604 K-FDFSPFMVLIIAILNDGTIMTISKDRVKPS--PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 680 (885)
Q Consensus 604 ~-~~~~~~~il~i~i~~d~~~~~l~~d~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 680 (885)
+ +|++|+|++|+|+++|.+.+++++|++++. ++|++|+.+.+...++..|.+.+++++..|++++.. ++..
T Consensus 725 ~~~pl~~~qiL~inl~~D~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~ 798 (902)
T PRK10517 725 PFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHAN 798 (902)
T ss_pred hhhhhHHHHHHHHHHHHHHhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc
Confidence 6 699999999999999987899999999887 378889888888888888999888887666654321 1111
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccch--hhHHH
Q 002743 681 SLRTRPDEMMAALYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGWAG 757 (885)
Q Consensus 681 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 757 (885)
. .......++..|+.+++++.+++|++|+++ ++|.++|.+..+++.++.+++..++++..-.+++.+.+++ +..|+
T Consensus 799 ~-~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 877 (902)
T PRK10517 799 T-PETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWL 877 (902)
T ss_pred c-hhhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHH
Confidence 0 001123456679999999999999999987 5555555555444444444433333311112344566777 33344
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhc
Q 002743 758 VIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 758 ~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
++++++ +.++.++.|....+.+
T Consensus 878 ~~~~~~--~~~~~e~~K~~~~~~~ 899 (902)
T PRK10517 878 VAILAG--YMTLTQLVKGFYSRRY 899 (902)
T ss_pred HHHHHH--HHHHHHHHHHHHHHhh
Confidence 433333 3366788886644443
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=3e-123 Score=1139.35 Aligned_cols=764 Identities=26% Similarity=0.400 Sum_probs=632.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcC----CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC---
Q 002743 1 MWNPLSWVMEAAAIMAIALANG----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD--- 73 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd--- 73 (885)
|+||+.++|+++++++++++.. .+...+|.++++|++++++|++++++||+++++++++|+++.+++++|+||
T Consensus 79 f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~ 158 (903)
T PRK15122 79 FNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA 158 (903)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc
Confidence 6899999999999999998632 123358999999999999999999999999999999999999999999999
Q ss_pred ---CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC----------------------
Q 002743 74 ---GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP---------------------- 128 (885)
Q Consensus 74 ---g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~---------------------- 128 (885)
|++++|++++|||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+
T Consensus 159 ~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~ 238 (903)
T PRK15122 159 GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLD 238 (903)
T ss_pred CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCccc
Confidence 4899999999999999999999999999999999889999999999999999975
Q ss_pred -CCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchH
Q 002743 129 -YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYR 207 (885)
Q Consensus 129 -~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 207 (885)
+|++|+||.|.+|+++++|++||.+|++||+++++.+.+.++++|+.++++++++..+..+++.+.+++ ......+|.
T Consensus 239 ~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~-~~~~~~~~~ 317 (903)
T PRK15122 239 LPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI-NGFTKGDWL 317 (903)
T ss_pred ccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCCHH
Confidence 368999999999999999999999999999999998766778999999998876544332222222222 222356788
Q ss_pred hHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeeccc
Q 002743 208 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 287 (885)
Q Consensus 208 ~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 287 (885)
+++..++++++++|||+||++++++++.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 318 ~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~ 394 (903)
T PRK15122 318 EALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VS 394 (903)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999998652 22
Q ss_pred CCChHHHHHHHHHHccC--cCCChHHHHHHHhcCCh--HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHH
Q 002743 288 GVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPE 363 (885)
Q Consensus 288 ~~~~~~~l~~a~~~~~~--~~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e 363 (885)
+.+.++++.+++.++.. ..+||+|.|++.++.+. ......++.++++||++.+|+|++++++.+|+++.++|||||
T Consensus 395 ~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e 474 (903)
T PRK15122 395 GRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVE 474 (903)
T ss_pred CCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHH
Confidence 34456677776654332 24699999999887532 122346788999999999999999998778888999999999
Q ss_pred HHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----CCCCCCceeeEeeccCCCCCcc
Q 002743 364 QILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHD 428 (885)
Q Consensus 364 ~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~-----~~~e~~l~llG~i~i~D~lr~~ 428 (885)
.++++|+. +++.++++.+..++++++|+|++++||++++.++. +..|++++|+|+++++||||||
T Consensus 475 ~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~ 554 (903)
T PRK15122 475 EMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKES 554 (903)
T ss_pred HHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHH
Confidence 99999963 23345677888899999999999999998765321 2357899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHH
Q 002743 429 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEI 508 (885)
Q Consensus 429 ~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~i 508 (885)
++++|++||++||+|+|+||||+.||.++|+++||.. ...+.|.+.+ .++++++++.+++.++|||++|+||+++
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~i 629 (903)
T PRK15122 555 AAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRV 629 (903)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHH
Confidence 9999999999999999999999999999999999953 3456666555 7889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHH
Q 002743 509 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 588 (885)
Q Consensus 509 V~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ 588 (885)
|+.||++|++|+|||||+||+||||+||||||||+|+|+||++||+||++|+|++|+.++++||++|+||+|++.|.++.
T Consensus 630 V~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~ 709 (903)
T PRK15122 630 LKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASS 709 (903)
T ss_pred HHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHhhccccccccCCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 589 TIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFW 665 (885)
Q Consensus 589 ni~~~~~~~~~~~~~~-~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 665 (885)
|+..++.+++..++.+ +|++|+|++|+|+++|.+++++++|++.+.. +|.+|+.+.+-..++..|.+.+++++..|+
T Consensus 710 n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 789 (903)
T PRK15122 710 NFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFA 789 (903)
T ss_pred hHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9987776665555555 7899999999999999888999999988764 778887765555556677777777776555
Q ss_pred HHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhccc
Q 002743 666 LMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWS 744 (885)
Q Consensus 666 ~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 744 (885)
+++.. +. .+. . ......+|..|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.+++++..--.
T Consensus 790 ~~~~~--~~--~~~--~-~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 862 (903)
T PRK15122 790 LMWFV--FA--ANS--V-EMQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA 862 (903)
T ss_pred HHHHH--hc--cCc--H-hhhhhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 43211 00 010 0 00013457889999999999999999987 44444444443443333333333332200012
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 002743 745 FARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780 (885)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 780 (885)
++.+.++++..|++++.++++++++.|+.|.+.++.
T Consensus 863 ~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~ 898 (903)
T PRK15122 863 MVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRR 898 (903)
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 346778888888887888888888899988654443
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.1e-122 Score=1133.55 Aligned_cols=758 Identities=25% Similarity=0.388 Sum_probs=626.2
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEe------CC
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DG 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r------dg 74 (885)
|+||+.|+|+++++++++++ +|.++++|++++++|.+++++||+|+++++++|+++.+++++|+| ||
T Consensus 67 ~~~p~~~iL~~~a~ls~~~~-------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg 139 (867)
T TIGR01524 67 FNNPFIYILAMLMGVSYLTD-------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNG 139 (867)
T ss_pred HhhHHHHHHHHHHHHHHHHh-------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCC
Confidence 68999999999999999997 999999999999999999999999999999999999999999999 99
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC-------------cccccceeeeC
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQG 141 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gs~v~~G 141 (885)
++++|+++||||||+|.+++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|
T Consensus 140 ~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G 219 (867)
T TIGR01524 140 SMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSG 219 (867)
T ss_pred eEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEe
Confidence 99999999999999999999999999999999988999999999999999999874 69999999999
Q ss_pred eEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHc
Q 002743 142 EIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGI 221 (885)
Q Consensus 142 ~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~i 221 (885)
+++++|++||.+|++||+++++++.++++++|+.++++++++..+.++...+.++ .+.+...+|.+++..++++++++|
T Consensus 220 ~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~i 298 (867)
T TIGR01524 220 HAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLT 298 (867)
T ss_pred EEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999886677899999999998865544432322222 222344578889999999999999
Q ss_pred CCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHH
Q 002743 222 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 301 (885)
Q Consensus 222 P~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~ 301 (885)
||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.+
T Consensus 299 P~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~ 375 (867)
T TIGR01524 299 PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLN 375 (867)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999988641 2234566677777655
Q ss_pred ccCc--CCChHHHHHHHhcCCh--HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC------
Q 002743 302 SRTE--NQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 371 (885)
Q Consensus 302 ~~~~--~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 371 (885)
+... .+||+|.|++.++.+. ......++.++.+||+|.+|+|++++.+.++.++.++||+||.++++|+.
T Consensus 376 ~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~ 455 (867)
T TIGR01524 376 SYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGA 455 (867)
T ss_pred CCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCc
Confidence 4432 3599999999887532 22345688899999999999999998776666789999999999999963
Q ss_pred ----ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEE
Q 002743 372 ----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 444 (885)
Q Consensus 372 ----~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~ 444 (885)
+++.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++|+++||+++
T Consensus 456 ~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vv 535 (867)
T TIGR01524 456 VVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVK 535 (867)
T ss_pred eecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEE
Confidence 23445678888999999999999999998765432 12478899999999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcC
Q 002743 445 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 524 (885)
Q Consensus 445 mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGD 524 (885)
|+||||+.||.++|+++||.. ...+.|.+.+ .++++++.+.+++.++|||++||||+++|+.||++|++|+|+||
T Consensus 536 miTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GD 610 (867)
T TIGR01524 536 VLTGDNEIVTARICQEVGIDA----NDFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGD 610 (867)
T ss_pred EEcCCCHHHHHHHHHHcCCCC----CCeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECC
Confidence 999999999999999999963 2455565554 67888999999999999999999999999999999999999999
Q ss_pred CcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002743 525 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK 604 (885)
Q Consensus 525 G~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~ 604 (885)
|+||+||||+||||||||+|+|+||++||+||++|+|++|+.++++||++|+||+|++.|.++.|+..++.+++..++++
T Consensus 611 GvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~ 690 (867)
T TIGR01524 611 GINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690 (867)
T ss_pred CcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877766655555
Q ss_pred -CCCcHHHHHHHHHHhhccccccccCCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccc
Q 002743 605 -FDFSPFMVLIIAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS 681 (885)
Q Consensus 605 -~~~~~~~il~i~i~~d~~~~~l~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 681 (885)
+|++|+|++|+|+++|.+++++++|++.+.. +|++|+.+.+...++..|.+.+++++..|++++... +..+
T Consensus 691 ~~pl~~~qil~inl~~d~~~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~ 764 (867)
T TIGR01524 691 FLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF------SANT 764 (867)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------cccc
Confidence 7999999999999999778999999988763 566688777777777889988877776665543211 0000
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHH
Q 002743 682 LRTRPDEMMAALYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIW 760 (885)
Q Consensus 682 ~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (885)
. ......++..|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.++++..+-..++.+.++++.|+.+++
T Consensus 765 ~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~ 843 (867)
T TIGR01524 765 V-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLI 843 (867)
T ss_pred h-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHH
Confidence 0 01223568889999999999999999987 444444433333333333333222221100123456655443322222
Q ss_pred HHHHHHHHHHHHHHHHhHHhc
Q 002743 761 LYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 761 ~~~~~~~~~~~~~k~~~r~~~ 781 (885)
.+.+.+.++.|+.|.+..+.+
T Consensus 844 ~~~~~~~~~~e~~k~~~~~~~ 864 (867)
T TIGR01524 844 AILVGYMATMQLVKTFYIRRF 864 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 333333366788887655443
No 8
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=5.4e-123 Score=1148.56 Aligned_cols=765 Identities=26% Similarity=0.397 Sum_probs=622.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|+||+.++|++|++++++++ +|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+
T Consensus 60 ~~~~~~~iL~~aails~~~~-------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~ 132 (1053)
T TIGR01523 60 VCNAMCMVLIIAAAISFAMH-------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAID 132 (1053)
T ss_pred HhCHHHHHHHHHHHHHHHHh-------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecC
Confidence 57999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC---------------CcccccceeeeCeEEE
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEA 145 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~~Gs~v~~G~~~~ 145 (885)
++||||||||.|++||+|||||||++++++.||||+|||||.||.|.+. |++|+||.|.+|++.+
T Consensus 133 a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~ 212 (1053)
T TIGR01523 133 SHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKG 212 (1053)
T ss_pred HhhCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEE
Confidence 9999999999999999999999999998999999999999999999642 5789999999999999
Q ss_pred EEEEeccchhhhhHhhhhhccC------------------------------------CCCcHHHHHHHHHHHHHHHHHH
Q 002743 146 VVIATGVHTFFGKAAHLVDSTN------------------------------------QVGHFQKVLTAIGNFCICSIAV 189 (885)
Q Consensus 146 ~V~~tG~~T~~gki~~l~~~~~------------------------------------~~~~~~~~~~~i~~~~~~~i~~ 189 (885)
+|++||.+|++||+++++++.+ .++|+|+.++++++++.++.++
T Consensus 213 vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~ 292 (1053)
T TIGR01523 213 ICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAII 292 (1053)
T ss_pred EEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886432 1389999999999875544333
Q ss_pred HHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCC
Q 002743 190 GIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 269 (885)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGT 269 (885)
..++.+++.+. ..+...+.+.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||
T Consensus 293 ~~~~~~~~~~~---~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGT 369 (1053)
T TIGR01523 293 FAIIVMAAHKF---DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGT 369 (1053)
T ss_pred HHHHHHHHHhh---hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCc
Confidence 22222221111 122466778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEeeee---c-----ccCC---------------------------------------C---------hHH
Q 002743 270 LTLNKLTVDRNLIEV---F-----AKGV---------------------------------------E---------KEH 293 (885)
Q Consensus 270 LT~n~m~v~~~~~~~---~-----~~~~---------------------------------------~---------~~~ 293 (885)
||+|+|+|.+++... + ..++ + ..+
T Consensus 370 LT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1053)
T TIGR01523 370 ITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIK 449 (1053)
T ss_pred cccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHH
Confidence 999999999876421 0 0000 0 012
Q ss_pred HHHHHHHHccC------------cCCChHHHHHHHhcCCh----------HHH-------------------hcCCceEE
Q 002743 294 VILLAARASRT------------ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVH 332 (885)
Q Consensus 294 ~l~~a~~~~~~------------~~~~~~~~al~~~~~~~----------~~~-------------------~~~~~~l~ 332 (885)
++..++.|+.. ..+||+|.|++.++... .+. ...|++++
T Consensus 450 ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 450 LLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred HHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 44445554421 12599999998875311 111 23478899
Q ss_pred eecCCCCCccEEEEEEcCCC-cEEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEee
Q 002743 333 FLPFNPVDKRTALTYIDSDG-NWHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQ 399 (885)
Q Consensus 333 ~~pf~s~~kr~sv~~~~~~g-~~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~Glr~l~~a~~ 399 (885)
.+||+|.+|||+++++++++ ++++++|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 99999999999999987655 4789999999999999963 2334677888999999999999999999
Q ss_pred ecCCCC------------CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC
Q 002743 400 EIPEKT------------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 467 (885)
Q Consensus 400 ~~~~~~------------~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~ 467 (885)
.+++++ .+..|++|+|+|+++++||||||++++|++||++||+|+|+|||++.||.++|+++||..+.
T Consensus 610 ~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 610 SFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred ECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 886532 23468899999999999999999999999999999999999999999999999999996431
Q ss_pred C--------CCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 468 Y--------PSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 468 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
. ...++.|.+.+ .++++++++++++..+|||++|+||.++|+.+|++|++|+|||||+||+||||+|||||
T Consensus 690 ~~~~~~~~~~~~vitG~~l~-~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 690 FIHDRDEIMDSMVMTGSQFD-ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred ccccccccccceeeehHHhh-hcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence 1 12355555544 67788899999999999999999999999999999999999999999999999999999
Q ss_pred Eec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCcHHHH
Q 002743 540 AVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMV 612 (885)
Q Consensus 540 a~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~------~~~~~~~~i 612 (885)
||| +|+|+|+++||++|++|+|++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|+
T Consensus 769 Amg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qi 848 (1053)
T TIGR01523 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEI 848 (1053)
T ss_pred ecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHH
Confidence 998 8999999999999999999999999999999999999999999999998877776655542 368999999
Q ss_pred HHHHHHhhcc-ccccccCCCCCC-----CCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------c
Q 002743 613 LIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD--------A 676 (885)
Q Consensus 613 l~i~i~~d~~-~~~l~~d~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~ 676 (885)
+|+|+++|++ ++++++|++.+. |++ ++...++++...+..|+++++.++..|++.++. +..+ .
T Consensus 849 L~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ 927 (1053)
T TIGR01523 849 LWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAH 927 (1053)
T ss_pred HHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccc
Confidence 9999999965 699999887543 222 222234566667788999998888766644321 1000 0
Q ss_pred cCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc------------------chhHHHHHHHHHHHHHHHHHH
Q 002743 677 FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVATFIA 738 (885)
Q Consensus 677 ~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~ 738 (885)
++.. . ....+.+|+.|.++++++.+++|++|+.+.+.+. ..+.|++++++++.++..+ .
T Consensus 928 ~~~~-~-~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-~ 1004 (1053)
T TIGR01523 928 YHAG-C-NDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFP-T 1004 (1053)
T ss_pred cccc-c-cchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHH-H
Confidence 1100 0 1244678999999999999999999997633211 1345777777777665433 3
Q ss_pred Hhhc-c--cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002743 739 VYAN-W--SFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 739 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
+|.+ . ..+.+.+++|.|+. +++++++.++..|+.|+++|+..
T Consensus 1005 ~~~p~~~~~~f~~~~l~~~w~~-~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1005 IYIPVINDDVFKHKPIGAEWGL-AAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HhhhhhhhhhhccCCcchHHHH-HHHHHHHHHHHHHHHHHHHHhcc
Confidence 5543 2 25567778886654 57888888999999998876553
No 9
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.2e-117 Score=1097.01 Aligned_cols=767 Identities=22% Similarity=0.340 Sum_probs=621.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcC------CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCceEEEeC
Q 002743 1 MWNPLSWVMEAAAIMAIALANG------GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRD 73 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~-~~~~~~V~rd 73 (885)
|++|+.++|+++++++++++.. .++..+|.++++|+++++++.++++++|++++++.++|++. .+++++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 5799999999999999998721 23345899999999999999999999999999999999874 4789999999
Q ss_pred CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCc--ccccceeeeCeEEEEEEEec
Q 002743 74 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATG 151 (885)
Q Consensus 74 g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~--v~~Gs~v~~G~~~~~V~~tG 151 (885)
|++++|++++|||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 9999999999999999999999999999999999889999999999999999998875 99999999999999999999
Q ss_pred cchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhcc---c---------cchHhHHHHHHHH
Q 002743 152 VHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII---MYPVQ---H---------RKYRDGIDNLLVL 216 (885)
Q Consensus 152 ~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~l~l 216 (885)
.+|++||++++++.+++++++|+.++++.+++...+++..++.+++ .|... . .++.+.+..++++
T Consensus 254 ~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~l 333 (941)
T TIGR01517 254 VNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTI 333 (941)
T ss_pred CCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHH
Confidence 9999999999998876778999999998887543322211111111 11111 1 2466788899999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecc---cC----C
Q 002743 217 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----V 289 (885)
Q Consensus 217 lv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~---~~----~ 289 (885)
++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++...... .+ .
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 413 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNV 413 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999987643210 00 0
Q ss_pred C--hHHHHHHHHH-HccCc-----------CCChHHHHHHHhcC----ChHHHhcCCceEEeecCCCCCccEEEEEEcCC
Q 002743 290 E--KEHVILLAAR-ASRTE-----------NQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSD 351 (885)
Q Consensus 290 ~--~~~~l~~a~~-~~~~~-----------~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~ 351 (885)
+ ..+++..++. ++... .+||+|.|+++++. +..+.+..++.++.+||+|.+|||+++++..+
T Consensus 414 ~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~ 493 (941)
T TIGR01517 414 PKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG 493 (941)
T ss_pred CHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCC
Confidence 0 1222333332 22211 25899999998864 33344456778899999999999999998777
Q ss_pred CcEEEEEcCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceeeEe
Q 002743 352 GNWHRASKGAPEQILALCNCR----------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGL 418 (885)
Q Consensus 352 g~~~~~~KGa~e~il~~~~~~----------~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~---~~~e~~l~llG~ 418 (885)
++++.++|||||.++++|+.. .+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+
T Consensus 494 ~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGl 573 (941)
T TIGR01517 494 GKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGV 573 (941)
T ss_pred CcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEE
Confidence 778999999999999999631 0135678888999999999999999999864332 334789999999
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
++++||||||++++|++||++||+++|+||||+.||.++|+++||.++. ..++.|.+.+ .++++++++.+++.++||
T Consensus 574 i~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfa 650 (941)
T TIGR01517 574 VGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLA 650 (941)
T ss_pred eeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEE
Confidence 9999999999999999999999999999999999999999999997532 2455555544 677889999999999999
Q ss_pred eeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHH
Q 002743 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 577 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~ 577 (885)
|++|+||+++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|
T Consensus 651 r~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~n 730 (941)
T TIGR01517 651 RSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDN 730 (941)
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCCCccc----HHHHHHH
Q 002743 578 MKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSWK----LKEIFAT 648 (885)
Q Consensus 578 i~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~~~~~----~~~~~~~ 648 (885)
+++++.|.+++|+..++..++. .+..++|++|+|++|+|+++|.+ ++++++|++.+. ++|.+|+ .+.++..
T Consensus 731 i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~ 810 (941)
T TIGR01517 731 IRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKN 810 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHH
Confidence 9999999999999766555543 44567899999999999999975 799999887553 2333332 3456666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC--Cc---ccchhHH
Q 002743 649 GVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SF---IERPGLL 722 (885)
Q Consensus 649 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~--~~---~~~~~~~ 722 (885)
.+..|+++++++++.+++... ++.. .+... ........+|+.|.++++++.++.+++|+.+. +| ++| ++
T Consensus 811 i~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n--~~ 885 (941)
T TIGR01517 811 ILGQAGYQLVVTFILLFAGGS--IFDV-SGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKN--RI 885 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--hhcc-cCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCccccccccccc--HH
Confidence 777899988888876665431 1110 01000 00123457899999999999999999998653 22 334 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002743 723 LATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 776 (885)
Q Consensus 723 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 776 (885)
+++++++..++..++..+. -.++++.+++|..|+.+++++++.+++.++.|++
T Consensus 886 ~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 886 FVTIMGFTFGFQVIIVEFG-GSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555555555543333332 2345677788888888888888888888888875
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=4e-117 Score=1099.72 Aligned_cols=776 Identities=23% Similarity=0.371 Sum_probs=627.6
Q ss_pred CcchHHHHHHHHHHHHHHHhcC------CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCC
Q 002743 1 MWNPLSWVMEAAAIMAIALANG------GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg 74 (885)
|+||+.++|+++++++++.... .....+|.+++++++++++|++++++||+|+++++++|+++.+++++|+|||
T Consensus 70 ~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg 149 (997)
T TIGR01106 70 LFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDG 149 (997)
T ss_pred HhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC
Confidence 6899999999999998876321 1123479999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC----------cccccceeeeCeEE
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIE 144 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gs~v~~G~~~ 144 (885)
++++|++++|||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.
T Consensus 150 ~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~ 229 (997)
T TIGR01106 150 EKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTAR 229 (997)
T ss_pred EEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEE
Confidence 99999999999999999999999999999999987999999999999999998864 69999999999999
Q ss_pred EEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCC
Q 002743 145 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 223 (885)
Q Consensus 145 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 223 (885)
++|++||.+|++|++++++++. .+++|+|+.++++++++....++..++ +++.+...+.+|.+.+..++++++++|||
T Consensus 230 ~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~ 308 (997)
T TIGR01106 230 GIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPE 308 (997)
T ss_pred EEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCc
Confidence 9999999999999999998775 467999999999988765544332222 22222334567888899999999999999
Q ss_pred chHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeec--c-cC--------CCh-
Q 002743 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-KG--------VEK- 291 (885)
Q Consensus 224 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--~-~~--------~~~- 291 (885)
+||++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.++++... . .+ .+.
T Consensus 309 ~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (997)
T TIGR01106 309 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKS 388 (997)
T ss_pred cchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcc
Confidence 99999999999999999999999999999999999999999999999999999998864211 0 00 111
Q ss_pred ----HHHHHHHHHHccC---------------cCCChHHHHHHHhcC----ChHHHhcCCceEEeecCCCCCccEEEEEE
Q 002743 292 ----EHVILLAARASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYI 348 (885)
Q Consensus 292 ----~~~l~~a~~~~~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pf~s~~kr~sv~~~ 348 (885)
+.++..++.|+.. ..+||.|.|+++++. +..+.+..++.++.+||+|.+|||++++.
T Consensus 389 ~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~ 468 (997)
T TIGR01106 389 SATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHE 468 (997)
T ss_pred cHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEe
Confidence 2355555555421 125899999998763 33445677899999999999999998876
Q ss_pred cC---CCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---------
Q 002743 349 DS---DGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------- 406 (885)
Q Consensus 349 ~~---~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~--------- 406 (885)
.. ++++++++|||||.|+++|+. +++.++++.+.+++++++|+||+++||+.+++++.
T Consensus 469 ~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~ 548 (997)
T TIGR01106 469 NEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTD 548 (997)
T ss_pred ccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccch
Confidence 32 246789999999999999962 23456778889999999999999999998864321
Q ss_pred --CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------------
Q 002743 407 --ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--------------- 469 (885)
Q Consensus 407 --~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~--------------- 469 (885)
+..|++|+|+|+++++||||||++++|++|+++||+++|+|||++.+|.++|+++|+..+...
T Consensus 549 ~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~ 628 (997)
T TIGR01106 549 DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQ 628 (997)
T ss_pred hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccc
Confidence 123789999999999999999999999999999999999999999999999999999643210
Q ss_pred -------CccccCcccccccCcchHHHHHHhcC--eEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 470 -------SSSLLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 470 -------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
..++.|.+.+ .++++++++++++.. ||||++|+||+++|+.+|++|++|+|+|||+||+||||+||||||
T Consensus 629 ~~~~~~~~~vi~G~~l~-~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 629 VNPRDAKACVVHGSDLK-DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred cccccccceEEEhHHhh-hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 1244454443 567788899988875 999999999999999999999999999999999999999999999
Q ss_pred ec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHHH
Q 002743 541 VA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAIL 618 (885)
Q Consensus 541 ~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~-~~~~~~~~~il~i~i~ 618 (885)
|| +|+|+|+++||++|++|+|++|+.++++||++|+|++|++.|.++.|+..++.++++.++ .+.|++|+|++|+|++
T Consensus 708 mg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli 787 (997)
T TIGR01106 708 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLG 787 (997)
T ss_pred cCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 99 799999999999999999999999999999999999999999999999877766665543 4568999999999999
Q ss_pred hhcc-ccccccCCCCCC---CCCCccc-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHh-hccccc-ccCc-------
Q 002743 619 NDGT-IMTISKDRVKPS---PQPDSWK-----LK-EIFATGVVLGSYLAIMTVVFFWLMRK-TDFFSD-AFGV------- 679 (885)
Q Consensus 619 ~d~~-~~~l~~d~~~~~---~~~~~~~-----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~------- 679 (885)
+|.+ ++++++|++.+. ++|.+++ .+ .++.+.+..|+++++..+++|++.+. .||... .++.
T Consensus 788 ~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 867 (997)
T TIGR01106 788 TDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDR 867 (997)
T ss_pred HHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccc
Confidence 9985 699999887643 2232221 12 23344456688999888876665442 222111 0110
Q ss_pred --cccCCC-------------HHHHHHHHHHHHHHHHHHHHhhhccCCCC-c-ccchhHHHHHHHHHHHHHHHHHHHhhc
Q 002743 680 --RSLRTR-------------PDEMMAALYLQVSIISQALIFVTRSRSWS-F-IERPGLLLATAFVIAQLVATFIAVYAN 742 (885)
Q Consensus 680 --~~~~~~-------------~~~~~t~~f~~~~~~~~~~~~~~rs~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~ 742 (885)
.+..+. ..+.+|++|.+++++|.++.+++|+.+.+ | ...+++++++++++.+++..++ .|.+
T Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p 946 (997)
T TIGR01106 868 WINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCP 946 (997)
T ss_pred cccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhh
Confidence 000000 01468999999999999999999997643 2 2245556766666665554443 3433
Q ss_pred --ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002743 743 --WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 779 (885)
Q Consensus 743 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 779 (885)
-.++.+.++++.+|+++++++++.++..++.|++.|+
T Consensus 947 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 947 GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRR 985 (997)
T ss_pred hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2345677888888888888998888888999987764
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.2e-116 Score=1086.67 Aligned_cols=746 Identities=27% Similarity=0.401 Sum_probs=624.3
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeC
Q 002743 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDA 81 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~ 81 (885)
+||+.++|+++++++++++ +|.++++|+++++++..++++||+++++++++|+++.+++++|+|||++++|++
T Consensus 60 ~~~~~~~L~~aa~ls~~~g-------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~ 132 (884)
T TIGR01522 60 KNPLILLLIASAVISVFMG-------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLA 132 (884)
T ss_pred hChHHHHHHHHHHHHHHHc-------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEH
Confidence 8999999999999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCC--------------cccccceeeeCeEEEEE
Q 002743 82 SILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVV 147 (885)
Q Consensus 82 ~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~~Gs~v~~G~~~~~V 147 (885)
+||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|
T Consensus 133 ~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V 212 (884)
T TIGR01522 133 STLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIV 212 (884)
T ss_pred HHCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEE
Confidence 9999999999999999999999999977999999999999999999863 79999999999999999
Q ss_pred EEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchH
Q 002743 148 IATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 226 (885)
Q Consensus 148 ~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~ 226 (885)
++||.+|.+||+++++++. ..++++|+.++++++++....++.+++.+++.| ..+.++.+++...+++++++|||+||
T Consensus 213 ~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp 291 (884)
T TIGR01522 213 VGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLP 291 (884)
T ss_pred EEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHH
Confidence 9999999999999999876 468999999999998865443332222233333 34567888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeee-cc---cC--C-----------
Q 002743 227 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV-FA---KG--V----------- 289 (885)
Q Consensus 227 ~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~-~~---~~--~----------- 289 (885)
++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++.... .. .+ +
T Consensus 292 ~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (884)
T TIGR01522 292 IIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGD 371 (884)
T ss_pred HHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccc
Confidence 9999999999999999999999999999999999999999999999999999876421 00 00 0
Q ss_pred --------ChHHHHHHHHHHccC--------cCCChHHHHHHHhcCC--hHHHhcCCceEEeecCCCCCccEEEEEEcC-
Q 002743 290 --------EKEHVILLAARASRT--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS- 350 (885)
Q Consensus 290 --------~~~~~l~~a~~~~~~--------~~~~~~~~al~~~~~~--~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~- 350 (885)
...+++..++.|+.. ..+||+|.|++.++.. .+..+..++.++.+||+|.+|||+++++..
T Consensus 372 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 372 VLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred ccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 112445555544432 1247999999988642 223345688999999999999999988753
Q ss_pred CCcEEEEEcCcHHHHHHhccC-----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEee
Q 002743 351 DGNWHRASKGAPEQILALCNC-----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 419 (885)
Q Consensus 351 ~g~~~~~~KGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i 419 (885)
+++++.++|||||.|+.+|.. +++.++++.+.+++++++|+|++++||+++ +.+|+|+|++
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli 523 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLV 523 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEE
Confidence 567899999999999999963 133456778888999999999999999975 4579999999
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 420 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 420 ~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
+++||||||++++|++|+++||+++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+++..+|||
T Consensus 524 ~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 524 GINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred eccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEE
Confidence 999999999999999999999999999999999999999999997542 2345555443 6788899999999999999
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHH
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 578 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i 578 (885)
++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+++++|+|+.++.++++||++|+|+
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni 680 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNI 680 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCCCcc----cHHHHHHHH
Q 002743 579 KNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATG 649 (885)
Q Consensus 579 ~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~~~~----~~~~~~~~~ 649 (885)
++++.|.++.|+..++.+++. .+..+.|++|+|++|+|+++|++ ++++++|++.+. ++|.++ ..+.++...
T Consensus 681 ~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~ 760 (884)
T TIGR01522 681 KNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKI 760 (884)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHH
Confidence 999999999999766665443 44567899999999999999987 589999887543 223222 224566667
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHH
Q 002743 650 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATA 726 (885)
Q Consensus 650 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~ 726 (885)
++.|+++++++++.|++.+.. + ......+|++|.++++++.++.|++|+++.+++. ..+++++++
T Consensus 761 ~~~g~~~~~~~~~~~~~~~~~-------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 828 (884)
T TIGR01522 761 LVSAIIIVVGTLFVFVREMQD-------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYA 828 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHH
Confidence 788999888877666543311 1 1234567999999999999999999997654332 234466666
Q ss_pred HHHHHHHHHHHHHhhc--ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002743 727 FVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 779 (885)
Q Consensus 727 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 779 (885)
+++..++..++ +|.+ -.++.+.+++|..|+.+++++++.+++.++.|+++|+
T Consensus 829 ~~~~~~~~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 829 VGGSIIGQLLV-IYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66665554333 4432 2344577888888888889999999999999987654
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.5e-116 Score=1084.77 Aligned_cols=775 Identities=27% Similarity=0.375 Sum_probs=622.8
Q ss_pred CcchHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEE
Q 002743 1 MWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWS 77 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~ 77 (885)
|++|+.++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||+++
T Consensus 5 f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~ 84 (917)
T TIGR01116 5 FEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWS 84 (917)
T ss_pred HhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEE
Confidence 68999999999999999987422 223589999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC-------------CcccccceeeeCeEE
Q 002743 78 EQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQGEIE 144 (885)
Q Consensus 78 ~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gs~v~~G~~~ 144 (885)
+|+++||||||+|.|++||.|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|++.
T Consensus 85 ~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~ 164 (917)
T TIGR01116 85 VIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKAR 164 (917)
T ss_pred EEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEE
Confidence 9999999999999999999999999999997899999999999999999875 789999999999999
Q ss_pred EEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-c----ccch----HhHHHHHH
Q 002743 145 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-Q----HRKY----RDGIDNLL 214 (885)
Q Consensus 145 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~~~~~l 214 (885)
++|++||.+|++||++++++.. ++++++|+.+++++.++..++++.+++.+++.+.. . ..+| ...+..++
T Consensus 165 ~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 244 (917)
T TIGR01116 165 GVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAV 244 (917)
T ss_pred EEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHH
Confidence 9999999999999999988776 57899999999998876544333222222221111 0 1122 23444667
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeec---------
Q 002743 215 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--------- 285 (885)
Q Consensus 215 ~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--------- 285 (885)
++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++....-
T Consensus 245 ~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 324 (917)
T TIGR01116 245 ALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFC 324 (917)
T ss_pred hhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEE
Confidence 88999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred --ccCCC-------------------hHHHHHHHHHHccC------------cCCChHHHHHHHhcCChH----------
Q 002743 286 --AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADPK---------- 322 (885)
Q Consensus 286 --~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~al~~~~~~~~---------- 322 (885)
..+++ .+.++..++.|+.. ..+||.|.|++.++.+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~ 404 (917)
T TIGR01116 325 VTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSS 404 (917)
T ss_pred ecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhccccc
Confidence 00000 12334445555431 125999999988753210
Q ss_pred ----------HHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC-----------ChHHHHHHHH
Q 002743 323 ----------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRKKVHA 381 (885)
Q Consensus 323 ----------~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~~~~~ 381 (885)
..+..+++++.+||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++++.+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~ 483 (917)
T TIGR01116 405 KRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILS 483 (917)
T ss_pred ccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHH
Confidence 124567789999999999999999875 467889999999999999963 1345677888
Q ss_pred HHHHHHH-cCCeEEEEEeeecCCCC----------CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 382 VIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 382 ~~~~~a~-~Glr~l~~a~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
++++|++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+|||+
T Consensus 484 ~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~ 563 (917)
T TIGR01116 484 VIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDN 563 (917)
T ss_pred HHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCC
Confidence 9999999 99999999999986432 144689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCC--CccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCC
Q 002743 451 LAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVND 528 (885)
Q Consensus 451 ~~tA~~ia~~lGi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~ND 528 (885)
..||.++|+++|+..+..+ ...+.|.+. ..+++++..+...+..+|||++|+||.++|+.+|+.|++|+|+|||+||
T Consensus 564 ~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND 642 (917)
T TIGR01116 564 KETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVND 642 (917)
T ss_pred HHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcch
Confidence 9999999999999653211 123444443 3566777888888889999999999999999999999999999999999
Q ss_pred hhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCC
Q 002743 529 APALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDF 607 (885)
Q Consensus 529 a~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~-~~~~~~~ 607 (885)
+||||+||||||||+|+++++++||+++.+|+|+.|++++++||++|+|+++++.|.+++|+..++..+++. +.++.||
T Consensus 643 ~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl 722 (917)
T TIGR01116 643 APALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGL 722 (917)
T ss_pred HHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchH
Confidence 999999999999999999999999999999999999999999999999999999999999998777766654 4456899
Q ss_pred cHHHHHHHHHHhhcc-ccccccCCCCCC-----CC-C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccc--
Q 002743 608 SPFMVLIIAILNDGT-IMTISKDRVKPS-----PQ-P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFSDA-- 676 (885)
Q Consensus 608 ~~~~il~i~i~~d~~-~~~l~~d~~~~~-----~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-- 676 (885)
+|+|++|+|+++|.+ +++++.+++.+. |+ + ++...+..+...+..|+++++++++.|++.+.. ++....
T Consensus 723 ~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (917)
T TIGR01116 723 IPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDED 802 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Confidence 999999999999965 688888876543 11 1 122223455566777999998877665544321 221100
Q ss_pred c--Ccc---cc----CCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--
Q 002743 677 F--GVR---SL----RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN-- 742 (885)
Q Consensus 677 ~--g~~---~~----~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~-- 742 (885)
. +.. +. .....+.+|+.|.++++++.++.|++|+.+.+++. ..+.|+++++++..++.. +..|.+
T Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~-~~~~v~~~ 881 (917)
T TIGR01116 803 SFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHF-LILYVPFL 881 (917)
T ss_pred ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHH-HHHHhHHH
Confidence 0 000 00 00124567999999999999999999997644332 234466666666655543 334443
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhH
Q 002743 743 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 778 (885)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r 778 (885)
-.++++.+++|..|+++++++++.++..++.|+++|
T Consensus 882 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 882 SRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 234567788999999889999999999999997753
No 13
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-117 Score=996.52 Aligned_cols=763 Identities=23% Similarity=0.336 Sum_probs=603.6
Q ss_pred cchHHHHHHHHHHHHHHHhcCCC-CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh-cCCCceEEEeCCeEEEE
Q 002743 2 WNPLSWVMEAAAIMAIALANGGG-RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQ 79 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~-~~~~~~~V~rdg~~~~i 79 (885)
.+.-.++|++||++|+.++.+.. -++.|+|++.|++.+++-.++..+.+|+.++....|.+ ....+..|+|||+.++|
T Consensus 154 qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~i 233 (1034)
T KOG0204|consen 154 QDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQI 233 (1034)
T ss_pred ccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEE
Confidence 45667899999999999986543 35689999988765554444455555555555555543 33567899999999999
Q ss_pred eCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCC--CCcccccceeeeCeEEEEEEEeccchhhh
Q 002743 80 DASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFG 157 (885)
Q Consensus 80 ~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--~~~v~~Gs~v~~G~~~~~V~~tG~~T~~g 157 (885)
+..|||||||+.|+.||.|||||++++|+++.||||++||||.++.|.+ +.++++||++.+|.++++|+++|.+|+.|
T Consensus 234 sI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG 313 (1034)
T KOG0204|consen 234 SIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWG 313 (1034)
T ss_pred EEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHh
Confidence 9999999999999999999999999999999999999999999999987 45899999999999999999999999999
Q ss_pred hHhhhhhccC-CCCcHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhcc-----cc---ch----Hh----HHHHHHHHH
Q 002743 158 KAAHLVDSTN-QVGHFQKVLTAIGNFCI---CSIAVGIVAEIIIMYPVQ-----HR---KY----RD----GIDNLLVLL 217 (885)
Q Consensus 158 ki~~l~~~~~-~~~~~~~~~~~i~~~~~---~~i~~~~~~~~~~~~~~~-----~~---~~----~~----~~~~~l~ll 217 (885)
++..++.... +++|+|-.+++++..+. +.++...+++++..|+.. +. .+ .. .|...+.++
T Consensus 314 ~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTil 393 (1034)
T KOG0204|consen 314 IIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTIL 393 (1034)
T ss_pred hHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEE
Confidence 9999988775 89999999988776532 222222222223333321 11 11 12 233334567
Q ss_pred HHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccC--------C
Q 002743 218 IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------V 289 (885)
Q Consensus 218 v~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~--------~ 289 (885)
++++|++||+++++++++++++|.+++.+||.++|+|+||+.++||+|||||||.|+|+|.+.++..-.+. .
T Consensus 394 VVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l 473 (1034)
T KOG0204|consen 394 VVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNL 473 (1034)
T ss_pred EEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999776422111 1
Q ss_pred ChH--HHHHHH-HHHcc-------------CcCCChHHHHHHHhc----CChHHHhcCCceEEeecCCCCCccEEEEEEc
Q 002743 290 EKE--HVILLA-ARASR-------------TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYID 349 (885)
Q Consensus 290 ~~~--~~l~~a-~~~~~-------------~~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~ 349 (885)
+++ +++..+ +..+. ...++|.|.|++++. .+.++.+.+.+.++++||||.+|+|+++++.
T Consensus 474 ~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~ 553 (1034)
T KOG0204|consen 474 PPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKL 553 (1034)
T ss_pred CHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEc
Confidence 111 111111 11111 012589999998875 4667778888999999999999999999998
Q ss_pred CCCcEEEEEcCcHHHHHHhccC-----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC-------C-CCCCC
Q 002743 350 SDGNWHRASKGAPEQILALCNC-----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPG 410 (885)
Q Consensus 350 ~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~-------~-~~~~e 410 (885)
++|..+.++|||.|.+++.|+. +++.+..+.+.++.||++|||++|+||++..+. + .+.++
T Consensus 554 ~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~ 633 (1034)
T KOG0204|consen 554 PDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPE 633 (1034)
T ss_pred CCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCC
Confidence 8877349999999999999974 344566888999999999999999999984332 1 24568
Q ss_pred CCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHH
Q 002743 411 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 490 (885)
Q Consensus 411 ~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (885)
.+++++|+++++||.|||++++|+.|++|||+|.|+||||..||++||++|||.++..+...+.|.+.. .+++++.+++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i 712 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKI 712 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhh
Confidence 899999999999999999999999999999999999999999999999999998765544555555554 7889999999
Q ss_pred HHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 491 IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 491 ~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.++.+|+||.+|.||+-+|+.|+++||+||+||||.||+||||+||||.||| .||++|||+|||+|+||||++|+.+++
T Consensus 713 ~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~ 792 (1034)
T KOG0204|consen 713 WPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVK 792 (1034)
T ss_pred hhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC-------CCCCcc
Q 002743 570 TSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-------PQPDSW 640 (885)
Q Consensus 570 ~gR~~~~~i~~~i~~~~~~ni-~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~-------~~~~~~ 640 (885)
|||..|.||+||++|.+..|+ ++++.+..+...-..|++++|+||+|+++|-+ +++|++|++.+. -+..+.
T Consensus 793 WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~L 872 (1034)
T KOG0204|consen 793 WGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPL 872 (1034)
T ss_pred hhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcc
Confidence 999999999999999999998 55556666666677999999999999999987 799999987543 233455
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCC---CC--
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRS---WS-- 714 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~---~~-- 714 (885)
..+.+|+..+.+++|+.++.+.+.+.... + |+... .+....+..|++|-+++++|.++-|+.|.-. .|
T Consensus 873 It~tMwknil~qa~YQl~vl~iL~F~G~~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkg 946 (1034)
T KOG0204|consen 873 ITRTMWKNILGQAVYQLIVLFILNFAGKS--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKG 946 (1034)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcchh--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHH
Confidence 56778888899999999888866554432 2 22211 1113445669999999999999999999854 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 002743 715 FIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILK 774 (885)
Q Consensus 715 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 774 (885)
.++|+ ++++++...++..++.+..-..++.+.+++|..|+++..+.+..++.-.+.|
T Consensus 947 i~~N~---~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik 1003 (1034)
T KOG0204|consen 947 IFRNR---LFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLK 1003 (1034)
T ss_pred HhcCc---eEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHhe
Confidence 12233 3333333333333333322234466788888888777777766665555554
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.1e-105 Score=1003.72 Aligned_cols=718 Identities=21% Similarity=0.261 Sum_probs=561.4
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~ 80 (885)
|+||+.+++++++++++..+ +|.++++|+++++++..++++|++++.++++++.. .++.++|+|||+|++|+
T Consensus 172 ~~~p~~i~~i~~~~l~~~~~-------~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~ 243 (1054)
T TIGR01657 172 VLHPFYVFQVFSVILWLLDE-------YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIA 243 (1054)
T ss_pred HhchHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEE
Confidence 57999999999877776653 89999999999999999999999999998888654 56789999999999999
Q ss_pred CCCCCCCcEEEEc--CCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC------------------Ccccccceeee
Q 002743 81 ASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY------------------DEVFSGSTCKQ 140 (885)
Q Consensus 81 ~~~Lv~GDiv~l~--~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~------------------~~v~~Gs~v~~ 140 (885)
++||||||+|.|+ +||.|||||+|++| ++.||||+|||||.|+.|.+. +++|+||.+.+
T Consensus 244 s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~ 322 (1054)
T TIGR01657 244 SDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQ 322 (1054)
T ss_pred cccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEE
Confidence 9999999999999 99999999999999 699999999999999999762 25999999985
Q ss_pred -------CeEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHH
Q 002743 141 -------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 212 (885)
Q Consensus 141 -------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (885)
|.+.++|++||.+|..|++.+.+... +..+++++...++..++.++.+++.+. +++.....+.++...+..
T Consensus 323 ~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~ 401 (1054)
T TIGR01657 323 IRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIY-TIIELIKDGRPLGKIILR 401 (1054)
T ss_pred EecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHH
Confidence 78999999999999999999988765 466788888877765543332222221 111222335678889999
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccC----
Q 002743 213 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG---- 288 (885)
Q Consensus 213 ~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~---- 288 (885)
++.+++++||++||++++++++.++.||+++|++||+++++|.+|++|++|||||||||+|+|+|.++........
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~ 481 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI 481 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998764211000
Q ss_pred ------CChHHHHHHHHHHcc------CcCCChHHHHHHHhcCCh----HH--H-------------hcCCceEEeecCC
Q 002743 289 ------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP----KE--A-------------RAGVREVHFLPFN 337 (885)
Q Consensus 289 ------~~~~~~l~~a~~~~~------~~~~~~~~~al~~~~~~~----~~--~-------------~~~~~~l~~~pf~ 337 (885)
.....+....+.|+. ...+||+|.|++++.+.. .+ . ...+++++.+||+
T Consensus 482 ~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~ 561 (1054)
T TIGR01657 482 VTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFS 561 (1054)
T ss_pred cccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeec
Confidence 011222333333322 123699999999976311 00 0 1457788999999
Q ss_pred CCCccEEEEEEcCC-CcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--------CCCC
Q 002743 338 PVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKES 408 (885)
Q Consensus 338 s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~--------~~~~ 408 (885)
|.+|||+++++..+ ++++.++|||||.|+++|+. +..++++.+.+++|+++|+||+++|||++++. ++++
T Consensus 562 S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~ 640 (1054)
T TIGR01657 562 SALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640 (1054)
T ss_pred CCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHH
Confidence 99999999998654 56789999999999999984 34567888899999999999999999998742 2356
Q ss_pred CCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC------------------
Q 002743 409 PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------------ 470 (885)
Q Consensus 409 ~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~------------------ 470 (885)
.|++|+|+|+++|+||+|||++++|++|+++||+++|+||||+.||.++|+++||..+....
T Consensus 641 ~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~ 720 (1054)
T TIGR01657 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKF 720 (1054)
T ss_pred HhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEE
Confidence 78999999999999999999999999999999999999999999999999999996432100
Q ss_pred ---------------------------------ccccCcccc--cccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhc
Q 002743 471 ---------------------------------SSLLGQDKD--ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER 515 (885)
Q Consensus 471 ---------------------------------~~~~~~~~~--~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~ 515 (885)
.+++|...+ ..+.++++.+++++..||||++|+||.++|+.||+.
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~ 800 (1054)
T TIGR01657 721 EVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL 800 (1054)
T ss_pred EecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC
Confidence 001111110 012345677788889999999999999999999999
Q ss_pred CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 516 KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595 (885)
Q Consensus 516 g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 595 (885)
|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++|++++.+|++||++|.++++.+.|.+.+++..++.
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~ 878 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYS 878 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999865 455 7999999999999999999999999999999999999988866554
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHhhcc-ccccccCCCCCC---CCC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002743 596 FMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQP-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT 670 (885)
Q Consensus 596 ~~~~~~~~~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~---~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 670 (885)
+++ ....+.+|+++|++|++++.+.+ .++++.+++.+. .+| .+...+..+...+.++++..+..+..|++....
T Consensus 879 ~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~ 957 (1054)
T TIGR01657 879 VSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQ 957 (1054)
T ss_pred HHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 433 33456889999999999999987 588888776543 223 333334455556667778877777777666655
Q ss_pred cccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc--hhHHHHHHHHHHHHH
Q 002743 671 DFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER--PGLLLATAFVIAQLV 733 (885)
Q Consensus 671 ~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~--~~~~l~~~~~~~~~~ 733 (885)
+|+........ -........|++| .++.++++..+..++.+..|... .+.++++++++..++
T Consensus 958 ~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 958 PWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGL 1022 (1054)
T ss_pred CCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHH
Confidence 55421111000 0001223467778 66677777778888766443221 233555555544333
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-107 Score=918.19 Aligned_cols=778 Identities=23% Similarity=0.384 Sum_probs=635.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcC-----CCCCCChhh-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCC
Q 002743 1 MWNPLSWVMEAAAIMAIALANG-----GGRDPDWQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG 74 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~-----~~~~~~~~~-~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg 74 (885)
+.|-+.++||++++++++.... ..++.+... +.++..++++..+..|+||.+..+-+++++++.|..+.|+|||
T Consensus 92 ~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg 171 (1019)
T KOG0203|consen 92 LFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDG 171 (1019)
T ss_pred HhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecc
Confidence 3577889999999999885421 112233333 3445566778889999999999999999999999999999999
Q ss_pred eEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC----------CcccccceeeeCeEE
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIE 144 (885)
Q Consensus 75 ~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gs~v~~G~~~ 144 (885)
+...+.+++|||||+|.++-||+||||.|++++..+++|+|+|||||.|..+++. |+.|.+|.+.+|.++
T Consensus 172 ~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~ 251 (1019)
T KOG0203|consen 172 EKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGR 251 (1019)
T ss_pred eeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEE
Confidence 9999999999999999999999999999999999999999999999999998763 678999999999999
Q ss_pred EEEEEeccchhhhhHhhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCC
Q 002743 145 AVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 223 (885)
Q Consensus 145 ~~V~~tG~~T~~gki~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 223 (885)
++|++||.+|.+|+|+.+... ...++++++.++++..+......+ +.+.++..-...++.|..++.+++.++++.+|+
T Consensus 252 givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPe 330 (1019)
T KOG0203|consen 252 GIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPE 330 (1019)
T ss_pred EEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcC
Confidence 999999999999999998766 468889999998887664332222 222223222333778889988899999999999
Q ss_pred chHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeeccc----------------
Q 002743 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK---------------- 287 (885)
Q Consensus 224 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~---------------- 287 (885)
+|+.+++++++..++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+.+..-.
T Consensus 331 GL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~ 410 (1019)
T KOG0203|consen 331 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKS 410 (1019)
T ss_pred CccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhccccccc
Confidence 9999999999999999999999999999999999999999999999999999999876531100
Q ss_pred CCChHHHHHHHHHHccC---------------cCCChHHHHHHHhc----CChHHHhcCCceEEeecCCCCCccEEEEEE
Q 002743 288 GVEKEHVILLAARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYI 348 (885)
Q Consensus 288 ~~~~~~~l~~a~~~~~~---------------~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~ 348 (885)
...-..+.+.+..|++. ..+|+.+.|+++++ .+..+.++..+.+..+||||.+|+.-.+..
T Consensus 411 ~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~ 490 (1019)
T KOG0203|consen 411 SATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHE 490 (1019)
T ss_pred CchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEe
Confidence 01113456666666542 14688999999876 355677888999999999999999987776
Q ss_pred cCC---CcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---------
Q 002743 349 DSD---GNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------- 406 (885)
Q Consensus 349 ~~~---g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~--------- 406 (885)
..| .+..+..|||||.++++|+. ++...+.+++...++...|-|+++++++.+++++.
T Consensus 491 ~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d 570 (1019)
T KOG0203|consen 491 TEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTD 570 (1019)
T ss_pred cCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecC
Confidence 544 57789999999999999973 45667888888999999999999999999886532
Q ss_pred --CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------------
Q 002743 407 --ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--------------- 469 (885)
Q Consensus 407 --~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~--------------- 469 (885)
..+..+|.|+|++++.||||..+|+++.+||.+||||+|+||||+-||+++|+++||..+...
T Consensus 571 ~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~ 650 (1019)
T KOG0203|consen 571 DVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQ 650 (1019)
T ss_pred CCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccc
Confidence 234578999999999999999999999999999999999999999999999999997542110
Q ss_pred -------CccccCcccccccCcchHHHHHHhcC--eEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 470 -------SSSLLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 470 -------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
..++.|.++. .++.+++++++.+.. ||||.||+||+.||+.+|++|.+|+++|||+||+||||+||||||
T Consensus 651 vn~~~a~a~VihG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 651 VNSRDAKAAVIHGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred cCccccceEEEeccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 0123344433 788899999998765 999999999999999999999999999999999999999999999
Q ss_pred ec-cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHH
Q 002743 541 VA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAIL 618 (885)
Q Consensus 541 ~g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~i~ 618 (885)
|| .|+|++|+|||++|+||||++|+..|++||-+|+|+||.+.|.+++|+..+..+++ +.+..|+|+.++.+|+|.+.
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99 99999999999999999999999999999999999999999999999977766655 45568899999999999999
Q ss_pred hhcc-ccccccCCCCC------CC--CCCcccHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhhccccccc----------
Q 002743 619 NDGT-IMTISKDRVKP------SP--QPDSWKLKEIFAT-GVVLGSYLAIMTVVFFW-LMRKTDFFSDAF---------- 677 (885)
Q Consensus 619 ~d~~-~~~l~~d~~~~------~~--~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~---------- 677 (885)
+|.. +++++||.++. ++ +.++.-..+++.+ .+..|+++++..|+.|+ ++...||++...
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~ 889 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDD 889 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhh
Confidence 9987 69999998642 22 2233333455544 46679999999996655 445567776431
Q ss_pred CccccCCCHH-------------HHHHHHHHHHHHHHHHHHhhhccCCCC--cccchhHHHHHHHHHHHHHHHHHHHhhc
Q 002743 678 GVRSLRTRPD-------------EMMAALYLQVSIISQALIFVTRSRSWS--FIERPGLLLATAFVIAQLVATFIAVYAN 742 (885)
Q Consensus 678 g~~~~~~~~~-------------~~~t~~f~~~~~~~~~~~~~~rs~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 742 (885)
+++++.+++. +++|+.|.++++.|.+..+.+.+|+-+ -....|+.+++++++-.+++.++++-..
T Consensus 890 ~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg 969 (1019)
T KOG0203|consen 890 GVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPG 969 (1019)
T ss_pred hhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCcc
Confidence 1222222222 256889999999999988888777644 3456777888898888777766643321
Q ss_pred -ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 002743 743 -WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780 (885)
Q Consensus 743 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 780 (885)
.....+.++.|.||++.+.++++.++.+|+.|++.|++
T Consensus 970 ~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 970 VLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred HHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 12345788899999999999999999999999998864
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=7.1e-98 Score=936.10 Aligned_cols=765 Identities=18% Similarity=0.230 Sum_probs=558.0
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC-CeEEEE
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQ 79 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd-g~~~~i 79 (885)
|..|..+++++.+++.++..... ...+...+.++++++++.+.+++|+++++++.+++ ++++++|+|| |+++++
T Consensus 25 f~~~~N~yfl~i~ilq~ip~~s~--~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~---n~~~~~v~~~~~~~~~i 99 (1057)
T TIGR01652 25 FKRFANLYFLVVALLQQVPILSP--TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEV---NNRLTEVLEGHGQFVEI 99 (1057)
T ss_pred HHHHhhHHHHHHHHHHcCCCcCC--CCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHH---hCcEEEEECCCCcEEEe
Confidence 45678889999999988843111 11233455666777789999999999999988654 4588999997 899999
Q ss_pred eCCCCCCCcEEEEcCCCeeeceEEEEeeCC----eEEEeccccCCCCccccCCC--------------------------
Q 002743 80 DASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-------------------------- 129 (885)
Q Consensus 80 ~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~~-------------------------- 129 (885)
+|+||+|||+|.|++||.||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 100 ~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~ 179 (1057)
T TIGR01652 100 PWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNA 179 (1057)
T ss_pred eeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCC
Confidence 999999999999999999999999998544 99999999999999988631
Q ss_pred ----------------------Ccccccceeee-CeEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHH
Q 002743 130 ----------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 130 ----------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~ 186 (885)
|.+++||.+++ |.+.|+|++||.+|++++... ....+.+++++.++++..+++++
T Consensus 180 ~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~--~~~~k~s~le~~ln~~~~~l~~~ 257 (1057)
T TIGR01652 180 SLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT--QAPSKRSRLEKELNFLIIILFCL 257 (1057)
T ss_pred cceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC--CCcccccHHHHHHhhHHHHHHHH
Confidence 46899999999 899999999999998876421 22347799999999998775544
Q ss_pred HHHHHHHHHHHHhhccc----cch---------------HhHHHHHHHHHHHHcCCchHHHHHHHHHHHH------HHhh
Q 002743 187 IAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS------HRLS 241 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~------~~l~ 241 (885)
.++.+++..++...... ..| ...+..++.++..++|++||+++++++.+++ .+|.
T Consensus 258 ~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~ 337 (1057)
T TIGR01652 258 LFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMY 337 (1057)
T ss_pred HHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhh
Confidence 33322222222211111 011 1256778899999999999999999999999 7887
Q ss_pred cC----CceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCC----------------------------
Q 002743 242 QQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---------------------------- 289 (885)
Q Consensus 242 ~~----~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~---------------------------- 289 (885)
++ ++++|+++++|+||++++||+|||||||+|+|+++++.+....++.
T Consensus 338 ~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1057)
T TIGR01652 338 HEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESK 417 (1057)
T ss_pred ccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhccccccccccccccccc
Confidence 64 5999999999999999999999999999999999998763211000
Q ss_pred -----C----------------hHHHHHHHHHHccC-------c-------CCChHHHHHHHhcCCh---------H---
Q 002743 290 -----E----------------KEHVILLAARASRT-------E-------NQDAIDAAIVGMLADP---------K--- 322 (885)
Q Consensus 290 -----~----------------~~~~l~~a~~~~~~-------~-------~~~~~~~al~~~~~~~---------~--- 322 (885)
+ ..+.+..++.|+.. . .++|.|.|++.++... +
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~ 497 (1057)
T TIGR01652 418 GFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSIS 497 (1057)
T ss_pred ccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceE
Confidence 0 01223333333321 1 2589999999876321 0
Q ss_pred ------HHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC-ChHHHHHHHHHHHHHHHcCCeEEE
Q 002743 323 ------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-REDVRKKVHAVIDKFAERGLRSLG 395 (885)
Q Consensus 323 ------~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~ 395 (885)
.....|++++.+||+|.||||++++++++|++++++|||||.|+++|.. +++.++++.+++++|+++|+||++
T Consensus 498 ~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~ 577 (1057)
T TIGR01652 498 LLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLC 577 (1057)
T ss_pred EEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEE
Confidence 0124588899999999999999999988888899999999999999985 345677888999999999999999
Q ss_pred EEeeecCCCCC-------------------------CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 396 VARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 396 ~a~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
+|+|.+++++. +.+|++|+|+|+++++||||+|++++|++|+++||++||+|||+
T Consensus 578 ~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~ 657 (1057)
T TIGR01652 578 IAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDK 657 (1057)
T ss_pred EEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCc
Confidence 99999876421 34689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCc---------------------------------------cccCcccccccCc---chHH
Q 002743 451 LAIGKETGRRLGMGTNMYPSS---------------------------------------SLLGQDKDASIAA---LPVD 488 (885)
Q Consensus 451 ~~tA~~ia~~lGi~~~~~~~~---------------------------------------~~~~~~~~~~~~~---~~~~ 488 (885)
++||.+||++|||.++..... ++.|...+..+++ +.+.
T Consensus 658 ~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~ 737 (1057)
T TIGR01652 658 VETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737 (1057)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHH
Confidence 999999999999975422100 1222222111111 1234
Q ss_pred HHHHhcC--eEEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe-c-cchHHHHhccCEEEcCCCcch
Q 002743 489 ELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 489 ~~~~~~~--v~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~-g-~~td~a~~aADivl~~~~~~~ 563 (885)
+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++ | +|. .|+.+||+++.+ |..
T Consensus 738 ~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~-qA~~aaD~~i~~--F~~ 814 (1057)
T TIGR01652 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM-QAVMASDFAIGQ--FRF 814 (1057)
T ss_pred HHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHH-HHHHhhhhhhhh--HHH
Confidence 4555555 99999999999999999998 99999999999999999999999998 4 333 466799999975 899
Q ss_pred HHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcHHHHHHHHHHhhcc-cccccc-CCCCC---
Q 002743 564 IISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLIIAILNDGT-IMTISK-DRVKP--- 633 (885)
Q Consensus 564 i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~----~~~~~~il~i~i~~d~~-~~~l~~-d~~~~--- 633 (885)
+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|+|++.+.+ +++++. |+..+
T Consensus 815 L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~ 894 (1057)
T TIGR01652 815 LTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASL 894 (1057)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHH
Confidence 99887 8999999999999999999999888877776665333 57888999999999876 567753 33211
Q ss_pred ---CC-------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHH
Q 002743 634 ---SP-------QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQA 703 (885)
Q Consensus 634 ---~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~ 703 (885)
.| +...++.+.++ ..++.|++++++++++.++.+...... ..| ...+.....+.+|+.+++..++
T Consensus 895 l~~~P~ly~~~~~~~~~~~~~f~-~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~~~~~~ 969 (1057)
T TIGR01652 895 SLRYPQLYREGQKGQGFSTKTFW-GWMLDGIYQSLVIFFFPMFAYILGDFV-SSG---SLDDFSSVGVIVFTALVVIVNL 969 (1057)
T ss_pred HHhChHHHHHhhhcCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCccc-cCC---cccchhhHHHHHHHHHHHHHHH
Confidence 11 11223444444 445679999988876555444321111 111 1123455667788888777777
Q ss_pred HHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhh-c---ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002743 704 LIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYA-N---WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 779 (885)
Q Consensus 704 ~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~ 779 (885)
.++ ..++.|+|......|. ++++..++..++..+. . ++.......++.+|+.+++..++.++++-++|.+++.
T Consensus 970 ~~~-~~~~~wt~~~~~~~~~--S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~ 1046 (1057)
T TIGR01652 970 KIA-LEINRWNWISLITIWG--SILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRL 1046 (1057)
T ss_pred HHH-HHHhHhHHHHHHHHHH--HHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 3444565543332222 2221111111111110 0 0001111123456666677777888898899988777
Q ss_pred hcCc
Q 002743 780 ILSG 783 (885)
Q Consensus 780 ~~~~ 783 (885)
+.|+
T Consensus 1047 ~~P~ 1050 (1057)
T TIGR01652 1047 FRPP 1050 (1057)
T ss_pred cCCC
Confidence 7653
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.6e-98 Score=875.90 Aligned_cols=543 Identities=23% Similarity=0.363 Sum_probs=453.1
Q ss_pred CcchHHHHHHHHHHHHHHHhcC-C-CCCCCh--hhHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHhcCCC-ceE-E
Q 002743 1 MWNPLSWVMEAAAIMAIALANG-G-GRDPDW--QDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK-V 70 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~-~-~~~~~~--~~~~~i~~~~~~~~~i~~~~----e~~a~~~~~~l~~~~~~-~~~-V 70 (885)
||||+.|+++++++++++++.. . .....| .+.+.|.+++++|.+++.++ |+|+++++++|+++.++ +++ |
T Consensus 30 ~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v 109 (673)
T PRK14010 30 IKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRI 109 (673)
T ss_pred HHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEE
Confidence 6899999999999999998731 1 000112 44777888888888888887 68999999999998887 776 7
Q ss_pred EeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC---CcccccceeeeCeEEEEE
Q 002743 71 LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAVV 147 (885)
Q Consensus 71 ~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gs~v~~G~~~~~V 147 (885)
.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.++|
T Consensus 110 ~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~V 188 (673)
T PRK14010 110 KQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188 (673)
T ss_pred EeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEE
Confidence 8999999999999999999999999999999999999 579999999999999999999 889999999999999999
Q ss_pred EEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHhHHHHHHHHHHHHcCCch
Q 002743 148 IATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAM 225 (885)
Q Consensus 148 ~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~iP~aL 225 (885)
+++|.+|++||++++++++ ++++|+|.....+...+.+++ +++ ++..+.. ...++...+...+++++++|||+|
T Consensus 189 ta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~---l~~-~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL 264 (673)
T PRK14010 189 TSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIF---LVV-ILTMYPLAKFLNFNLSIAMLIALAVCLIPTTI 264 (673)
T ss_pred EEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHH---HHH-HHHHHHHHhhccHHHHHHHHHHHHHHhhhhhH
Confidence 9999999999999999887 478898876655433222111 111 1111111 112344567778888899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCc
Q 002743 226 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 305 (885)
Q Consensus 226 ~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 305 (885)
|..++++.+.|+.+|+|+|+++|+++++|+||++|+||||||||||+|++.+.+... ..+.+.++++..++.++...
T Consensus 265 ~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~s 341 (673)
T PRK14010 265 GGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIAD 341 (673)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999998777666431 23455566777776666544
Q ss_pred CCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCCh-HHHHHHHHHHH
Q 002743 306 NQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAVID 384 (885)
Q Consensus 306 ~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~~~ 384 (885)
.||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+++.++++|.... ..+.++.+..+
T Consensus 342 -~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~ 414 (673)
T PRK14010 342 -DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVK 414 (673)
T ss_pred -CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHH
Confidence 49999999987642110 00112245689999999999864 343 566999999999997421 22334666778
Q ss_pred HHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 385 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 385 ~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
+++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||.
T Consensus 415 ~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 415 GVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred HHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 89999999999864 34899999999999999999999999999999999999999999999999994
Q ss_pred CCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccc
Q 002743 465 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 544 (885)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~ 544 (885)
++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+|
T Consensus 482 ------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsG 531 (673)
T PRK14010 482 ------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSG 531 (673)
T ss_pred ------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCC
Confidence 26999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 545 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 601 (885)
Q Consensus 545 td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~ 601 (885)
||+||++||+||++|||++|++++++||++|.|+++++.|.++.|++.++..+...|
T Consensus 532 TdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 532 TMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987666554433
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=7.8e-94 Score=841.65 Aligned_cols=534 Identities=24% Similarity=0.327 Sum_probs=450.3
Q ss_pred CcchHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-ceEEEe
Q 002743 1 MWNPLSWVMEAAAIMAIALANGG----GR---DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKVLR 72 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~~----~~---~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~-~~~V~r 72 (885)
|+||+.++++++++++++++... +. ...|...+.+++.+++..+++.++|+|+++++++|+++.+. +++|+|
T Consensus 31 ~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir 110 (679)
T PRK01122 31 IRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLR 110 (679)
T ss_pred hhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 68999999999999999987311 11 12344445555566667777889999999999999998875 799999
Q ss_pred CCe-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCc---ccccceeeeCeEEEEEE
Q 002743 73 DGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAVVI 148 (885)
Q Consensus 73 dg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gs~v~~G~~~~~V~ 148 (885)
||+ +++|++++|+|||+|.+++||.|||||++++| .+.||||+|||||.|+.|++|+. +|+||.|.+|++.++|+
T Consensus 111 ~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vt 189 (679)
T PRK01122 111 EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRIT 189 (679)
T ss_pred CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEE
Confidence 988 99999999999999999999999999999999 58999999999999999999988 99999999999999999
Q ss_pred EeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHH
Q 002743 149 ATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 227 (885)
Q Consensus 149 ~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~ 227 (885)
++|.+|++||+.++++++ .+++|+|..++.+...+...+++.++..+.+.++ .+.. .++...+++++++|||+|+.
T Consensus 190 a~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 190 ANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred EecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchhhh
Confidence 999999999999999887 4788999877776555433222222222222221 1222 37888899999999999999
Q ss_pred HHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCC
Q 002743 228 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQ 307 (885)
Q Consensus 228 ~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 307 (885)
.++++...|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|++.++.. ..+.+.++++..++.++...+
T Consensus 267 l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~- 342 (679)
T PRK01122 267 LLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADE- 342 (679)
T ss_pred HHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCC-
Confidence 9999999999999999999999999999999999999999999999999988652 235667778888777776554
Q ss_pred ChHHHHHHHhcCCh---HHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHHH
Q 002743 308 DAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVI 383 (885)
Q Consensus 308 ~~~~~al~~~~~~~---~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~~ 383 (885)
||.+.|+++++... ......++..+++||++.++++++.+ +| ..++||++|.+++.|+.. ...++++++.+
T Consensus 343 hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~ 417 (679)
T PRK01122 343 TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAV 417 (679)
T ss_pred CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHH
Confidence 89999999876431 11111245678899999988777643 34 578999999999999642 23456778888
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 002743 384 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 463 (885)
Q Consensus 384 ~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi 463 (885)
++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 418 ~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 418 DEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred HHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 9999999999999974 489999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEecc
Q 002743 464 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 543 (885)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~ 543 (885)
+ ++|||++||||+++|+.+|++|++|+|+|||+||+|||++||||||||+
T Consensus 485 d------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 534 (679)
T PRK01122 485 D------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 534 (679)
T ss_pred c------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 4 2699999999999999999999999999999999999999999999999
Q ss_pred chHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 002743 544 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 590 (885)
Q Consensus 544 ~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni 590 (885)
|||+||++||+|+++|||+.|++++++||++.-.--....|.+..-+
T Consensus 535 GTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 535 GTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999998444445556555444
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.4e-93 Score=887.76 Aligned_cols=759 Identities=16% Similarity=0.162 Sum_probs=534.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCC
Q 002743 6 SWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 85 (885)
Q Consensus 6 ~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv 85 (885)
.+..++.+++.++-.. .....+...+.+++++++.++.+.+++++++++..+. ++.+++|+|+|++++++|++|+
T Consensus 116 N~YFL~I~ilq~ip~~--s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~---N~~~~~v~~~~~~~~i~~~~i~ 190 (1178)
T PLN03190 116 YIYFLVIAVLNQLPQL--AVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIE---NNRLAWVLVDDQFQEKKWKDIR 190 (1178)
T ss_pred hHHHHHHHHHHhCCCc--ccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh---cCcEEEEEECCeEEEEeHHHCC
Confidence 3444555566554221 1112455677888889999999999999999987764 4578999999999999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEeeC----CeEEEeccccCCCCccccCCC--------------------------------
Q 002743 86 PGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY-------------------------------- 129 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~~-------------------------------- 129 (885)
|||+|+|++||.||||++|++++ .|+||||+|||||+|+.|.++
T Consensus 191 vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~ 270 (1178)
T PLN03190 191 VGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQAN 270 (1178)
T ss_pred CCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEE
Confidence 99999999999999999999843 499999999999999999643
Q ss_pred -------------CcccccceeeeC-eEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 130 -------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEI 195 (885)
Q Consensus 130 -------------~~v~~Gs~v~~G-~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 195 (885)
+.+++||.++++ .+.|+|++||.+|+...- ......+.+++++.+|++..+++++.++.+++..
T Consensus 271 i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N--~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~ 348 (1178)
T PLN03190 271 MEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLN--NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVS 348 (1178)
T ss_pred EEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhc--CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 346677777776 499999999999974221 1111247899999999988765444333222222
Q ss_pred HH--Hhhccc-c---------------------ch-------HhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCC
Q 002743 196 II--MYPVQH-R---------------------KY-------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 244 (885)
Q Consensus 196 ~~--~~~~~~-~---------------------~~-------~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ 244 (885)
++ .|.... . ++ ...+...++++...||++|++++++++..++..+.++.
T Consensus 349 i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~ 428 (1178)
T PLN03190 349 VCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDD 428 (1178)
T ss_pred HHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhh
Confidence 22 121100 0 00 11123345677799999999999999988888887654
Q ss_pred ----------ceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccC--------------------------
Q 002743 245 ----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-------------------------- 288 (885)
Q Consensus 245 ----------ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------------------------- 288 (885)
+.+|+.+.+|+||+|++||+|||||||+|+|+++++.+.+..++
T Consensus 429 ~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (1178)
T PLN03190 429 QMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKM 508 (1178)
T ss_pred hcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccc
Confidence 78999999999999999999999999999999999987321110
Q ss_pred ---------------CC-h-----HHHHHHHHHHccC------------------cCCChHHHHHHHhcCC---------
Q 002743 289 ---------------VE-K-----EHVILLAARASRT------------------ENQDAIDAAIVGMLAD--------- 320 (885)
Q Consensus 289 ---------------~~-~-----~~~l~~a~~~~~~------------------~~~~~~~~al~~~~~~--------- 320 (885)
.+ + .+.+...+.|+.. ...+|.|.|++.++.+
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~ 588 (1178)
T PLN03190 509 KVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERT 588 (1178)
T ss_pred cccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEeccc
Confidence 00 0 1123333333211 1137999999988742
Q ss_pred -------hHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCC--hHHHHHHHHHHHHHHHcCC
Q 002743 321 -------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR--EDVRKKVHAVIDKFAERGL 391 (885)
Q Consensus 321 -------~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~--~~~~~~~~~~~~~~a~~Gl 391 (885)
....+..|++++.+||+|.|||||+++++++|++.+++|||||.|+++|+.. +..++++.+++++|+++|+
T Consensus 589 ~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~Gl 668 (1178)
T PLN03190 589 SGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGL 668 (1178)
T ss_pred CCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCC
Confidence 1224567899999999999999999999888889999999999999999743 4567788899999999999
Q ss_pred eEEEEEeeecCCCCC-------------------------CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEE
Q 002743 392 RSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 446 (885)
Q Consensus 392 r~l~~a~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~ml 446 (885)
|||++|||.++++++ +.+|+||+++|+++++||||+|++++|++|+++||++||+
T Consensus 669 RtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ml 748 (1178)
T PLN03190 669 RTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVL 748 (1178)
T ss_pred ceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 999999999975421 3468999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCCCccc-----------------------------------------------cCcccc
Q 002743 447 TGDQLAIGKETGRRLGMGTNMYPSSSL-----------------------------------------------LGQDKD 479 (885)
Q Consensus 447 TGD~~~tA~~ia~~lGi~~~~~~~~~~-----------------------------------------------~~~~~~ 479 (885)
|||+.+||++||++|||.++......+ .|....
T Consensus 749 TGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~ 828 (1178)
T PLN03190 749 TGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLV 828 (1178)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHH
Confidence 999999999999999997543211111 111111
Q ss_pred cccC---cchHHHHHHhcC--eEEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe-c-cchHHHHhc
Q 002743 480 ASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSA 551 (885)
Q Consensus 480 ~~~~---~~~~~~~~~~~~--v~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~-g-~~td~a~~a 551 (885)
...+ .+.+.++..++. ||||++|+||+++|+.+|++ +++|+|+|||+||+||||+|||||++ | +|.+|++ |
T Consensus 829 ~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~-a 907 (1178)
T PLN03190 829 YVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVM-A 907 (1178)
T ss_pred HHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHH-h
Confidence 0001 123445555665 79999999999999999997 68999999999999999999999998 5 5666665 9
Q ss_pred cCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----CcHHHHHHHHHHhh-cccccc
Q 002743 552 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFD----FSPFMVLIIAILND-GTIMTI 626 (885)
Q Consensus 552 ADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~----~~~~~il~i~i~~d-~~~~~l 626 (885)
||+++.++++...+.++ |||+.|+|+.+.+.|.+++|+.+++..+++.++.+|. +.++.+.++|++.. .+++.+
T Consensus 908 SDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~ 986 (1178)
T PLN03190 908 SDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVV 986 (1178)
T ss_pred hccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999887776666555 9999999999999999999999999988887775553 33444444444443 333443
Q ss_pred -ccCCCCC-------------CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHH
Q 002743 627 -SKDRVKP-------------SPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAA 692 (885)
Q Consensus 627 -~~d~~~~-------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 692 (885)
.+|+..+ .++...++.+.++. +++.|++++++.|++.++.+.... .+. ....+.
T Consensus 987 ~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~-w~~~~i~qs~iiff~~~~~~~~~~----~~~-------~~~~~~ 1054 (1178)
T PLN03190 987 GILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWL-TMIDTLWQSAVVFFVPLFAYWAST----IDG-------SSIGDL 1054 (1178)
T ss_pred HHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCC----cCc-------eeEhHh
Confidence 2333211 12233445555444 466699999988866555443211 110 112244
Q ss_pred HHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHh---hc-ccccccccchhhHHHHHHHHHHHHHH
Q 002743 693 LYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY---AN-WSFARIEGCGWGWAGVIWLYSLVTYF 768 (885)
Q Consensus 693 ~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (885)
+++.++++.++.++ ..+++|.|......|. ++++..++..++... .. +.+..+ ...+.+|+.+++..++.++
T Consensus 1055 ~~~~~v~~vnl~i~-~~~~~wt~~~~~~i~~--Si~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~ 1130 (1178)
T PLN03190 1055 WTLAVVILVNLHLA-MDIIRWNWITHAAIWG--SIVATFICVIVIDAIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALL 1130 (1178)
T ss_pred hhhHHHHHHHHHHH-HHHhhhhHHHHHHHHH--HHHHHHHHHHHHHhcccchhHHHHHHH-hccHHHHHHHHHHHHHHHH
Confidence 45555555555433 4444566554443322 222221111111100 00 111111 1234566676778888888
Q ss_pred HHHHHHHHhHHhcCcchhhhhh
Q 002743 769 PLDILKFGIRYILSGKAWDTLL 790 (885)
Q Consensus 769 ~~~~~k~~~r~~~~~~~~~~~~ 790 (885)
++-++|++.|.++|.. .+...
T Consensus 1131 p~~~~~~~~~~~~P~~-~~~~~ 1151 (1178)
T PLN03190 1131 PRFVVKVLYQYFTPCD-VQIAR 1151 (1178)
T ss_pred HHHHHHHHHHHcCCCH-HHHHH
Confidence 9899999888777644 44433
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.1e-89 Score=802.20 Aligned_cols=538 Identities=23% Similarity=0.328 Sum_probs=452.8
Q ss_pred CcchHHHHHHHHHHHHHHHhcC----C--CCCCChhhH---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCc-eEE
Q 002743 1 MWNPLSWVMEAAAIMAIALANG----G--GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKV 70 (885)
Q Consensus 1 ~~~p~~~~l~~aai~~~~~~~~----~--~~~~~~~~~---~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V 70 (885)
|.||+.++++++++++++++.. + +....|++. +.+++.+++..+++.++|+|+++++++|+++.++. ++|
T Consensus 30 ~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~v 109 (675)
T TIGR01497 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKL 109 (675)
T ss_pred hhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 5799999999999999998531 1 111247664 33444567778888899999999999999988774 888
Q ss_pred Ee-CCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCc---ccccceeeeCeEEEE
Q 002743 71 LR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 146 (885)
Q Consensus 71 ~r-dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gs~v~~G~~~~~ 146 (885)
+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++.++
T Consensus 110 lr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~ 188 (675)
T TIGR01497 110 LRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVE 188 (675)
T ss_pred EeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEE
Confidence 85 99999999999999999999999999999999999 68999999999999999999975 999999999999999
Q ss_pred EEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCch
Q 002743 147 VIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 225 (885)
Q Consensus 147 V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL 225 (885)
|+++|.+|++||+.++++++ .+++|+|..++.+..++.+++++..+. +..+..+. .....+...+++++++|||+|
T Consensus 189 Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 189 CTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred EEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCchhh
Confidence 99999999999999999886 468999988777665543322221111 11111111 122356777899999999998
Q ss_pred HHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCc
Q 002743 226 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 305 (885)
Q Consensus 226 ~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 305 (885)
+...+.+...|+.+|+++|+++|++.++|+||++|+||||||||||+|+|++.++.. ..+.+.++++..++.++..+
T Consensus 266 g~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s 342 (675)
T TIGR01497 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLAD 342 (675)
T ss_pred hhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCC
Confidence 887787777899999999999999999999999999999999999999999988652 23566778888887777655
Q ss_pred CCChHHHHHHHhcCChH--HHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHH
Q 002743 306 NQDAIDAAIVGMLADPK--EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 382 (885)
Q Consensus 306 ~~~~~~~al~~~~~~~~--~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~ 382 (885)
+ ||.+.|++.++.+.. .....++..++.||++.++++++.+. +| ..++||++|.+++.|... ...++++++.
T Consensus 343 ~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~ 417 (675)
T TIGR01497 343 D-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQA 417 (675)
T ss_pred C-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHH
Confidence 4 899999998764311 11112345678999999777665433 45 578999999999888532 2334567788
Q ss_pred HHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002743 383 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 462 (885)
Q Consensus 383 ~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lG 462 (885)
+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+++|
T Consensus 418 ~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 899999999999999753 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec
Q 002743 463 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 542 (885)
Q Consensus 463 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g 542 (885)
++ +++||++||||.++|+.+|++|+.|+|+|||+||+|||++|||||||+
T Consensus 485 I~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 485 VD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred CC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 84 269999999999999999999999999999999999999999999999
Q ss_pred cchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 002743 543 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 593 (885)
Q Consensus 543 ~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~ 593 (885)
+|+++|+++||++++++||+.+++++++||+++-.......|.++.++.-.
T Consensus 535 ~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 535 SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 999999999999999999999999999999999999999999888777543
No 21
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-86 Score=779.39 Aligned_cols=527 Identities=27% Similarity=0.369 Sum_probs=449.3
Q ss_pred HHHHHHHHHHHHHhcCC-CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEe-CCeEEEEeCCCC
Q 002743 7 WVMEAAAIMAIALANGG-GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASIL 84 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~L 84 (885)
.++.++++.+++++... -.+.+|.++.++++++++..+++-+...|+.+++++|.++.|.++++++ ||++++||.++|
T Consensus 151 ~Lv~la~~~A~~~s~~~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v 230 (713)
T COG2217 151 TLVALATIGAYAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEV 230 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHC
Confidence 34555556666655100 0002347788899999999999999999999999999999999997776 566999999999
Q ss_pred CCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhh
Q 002743 85 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 164 (885)
Q Consensus 85 v~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~ 164 (885)
+|||+|.|++||+||+||++++| ...||||+|||||.|+.|.+||.|++||.+.+|..+..|+++|.+|.+++|.++++
T Consensus 231 ~~GD~v~VrpGE~IPvDG~V~~G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe 309 (713)
T COG2217 231 QVGDIVLVRPGERIPVDGVVVSG-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVE 309 (713)
T ss_pred CCCCEEEECCCCEecCCeEEEeC-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHH
Confidence 99999999999999999999999 56899999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcC
Q 002743 165 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 243 (885)
Q Consensus 165 ~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~ 243 (885)
++ .++++.|+..|+++.+++..+++..++.++++++....+|..++..++++|+++|||+|.+++|++...|..+.+++
T Consensus 310 ~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~ 389 (713)
T COG2217 310 EAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARR 389 (713)
T ss_pred HHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhC
Confidence 88 58999999999999998775555444444433333346888999999999999999999999999999999999999
Q ss_pred CceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHH
Q 002743 244 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE 323 (885)
Q Consensus 244 ~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~ 323 (885)
|+++|+.+++|.++++|+++||||||||+|+++|.++.. . .+ ++++++.+++..+..++ ||+..|+++++.+..
T Consensus 390 GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~- 463 (713)
T COG2217 390 GILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG- 463 (713)
T ss_pred ceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999998763 2 23 78889999988887776 999999999765322
Q ss_pred HhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCC
Q 002743 324 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 403 (885)
Q Consensus 324 ~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~ 403 (885)
....+..+.+|-.. .... .+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++.+.
T Consensus 464 -~~~~~~~~~i~G~G----v~~~---v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg--- 526 (713)
T COG2217 464 -LPDVEDFEEIPGRG----VEAE---VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG--- 526 (713)
T ss_pred -CCCccceeeeccCc----EEEE---ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC---
Confidence 11222234444221 1111 255 5667799998754221 1111 4556778888999988888865
Q ss_pred CCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccC
Q 002743 404 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 483 (885)
Q Consensus 404 ~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~ 483 (885)
+++|+++++|++|||++++|++||+.|+++.|+||||..+|+++|+++||+.
T Consensus 527 ----------~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------ 578 (713)
T COG2217 527 ----------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------ 578 (713)
T ss_pred ----------EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------
Confidence 8999999999999999999999999999999999999999999999999942
Q ss_pred cchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcch
Q 002743 484 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 484 ~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~ 563 (885)
++|++.||||.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|+++++..
T Consensus 579 ------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~ 646 (713)
T COG2217 579 ------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSA 646 (713)
T ss_pred ------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 564 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 597 (885)
Q Consensus 564 i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 597 (885)
++.+++.+|+++++||+|+.|++.+|...+....
T Consensus 647 v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~ 680 (713)
T COG2217 647 VPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAA 680 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986555443
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=7.6e-86 Score=790.61 Aligned_cols=764 Identities=17% Similarity=0.203 Sum_probs=551.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCe-EEEEeCCCCC
Q 002743 7 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILV 85 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~Lv 85 (885)
+..++.+++.++- -.+...|...+.+++++.+.++.+.+|++++++....+ +..++.|+|++. +++..|++|+
T Consensus 62 ~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~ 135 (1151)
T KOG0206|consen 62 LYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVR 135 (1151)
T ss_pred HHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhhhhhccHHh---hcceeEEecCCceeeeeccceee
Confidence 4444555555552 12334677788899999999999999999999987764 457899998543 8999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEeeC----CeEEEeccccCCCCccccCC---------------------------------
Q 002743 86 PGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNP--------------------------------- 128 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~--------------------------------- 128 (885)
+||+|++..++.+|||.+|++++ .|+|++++|+||++.+.|+.
T Consensus 136 vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~ 215 (1151)
T KOG0206|consen 136 VGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFV 215 (1151)
T ss_pred eeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhh
Confidence 99999999999999999999654 49999999999999988753
Q ss_pred --------------CCcccccceeeeCe-EEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 002743 129 --------------YDEVFSGSTCKQGE-IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVA 193 (885)
Q Consensus 129 --------------~~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~ 193 (885)
.+++++|+++++++ +.++|++||++|++++.... ...+++.+++.++.+...++++++..+++
T Consensus 216 g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~ 293 (1151)
T KOG0206|consen 216 GNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGK--PPSKRSRIERKMNKIIILLFVLLILMCLI 293 (1151)
T ss_pred hheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCC--CccccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 13578899999886 89999999999987654322 23477888888888766544433332222
Q ss_pred HHHHH--hhcc-----------cc-----chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhh----------cCCc
Q 002743 194 EIIIM--YPVQ-----------HR-----KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS----------QQGA 245 (885)
Q Consensus 194 ~~~~~--~~~~-----------~~-----~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~----------~~~i 245 (885)
..+.. |... .. .....+..++.++...+|++|++.+++....++..+. ...+
T Consensus 294 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~ 373 (1151)
T KOG0206|consen 294 SAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPA 373 (1151)
T ss_pred HHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCcc
Confidence 11111 1110 00 0112456678889999999999999999999885543 3578
Q ss_pred eeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChH---------------------------------
Q 002743 246 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE--------------------------------- 292 (885)
Q Consensus 246 lvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--------------------------------- 292 (885)
.+|+.+..|+||++++|++|||||||+|.|++.+|.+++.+++...+
T Consensus 374 ~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 453 (1151)
T KOG0206|consen 374 QARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGL 453 (1151)
T ss_pred ccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccc
Confidence 99999999999999999999999999999999999986544332110
Q ss_pred -----------HHHHHHHHHcc-C------------cCCChHHHHHHHhcCChH----------------HHhcCCceEE
Q 002743 293 -----------HVILLAARASR-T------------ENQDAIDAAIVGMLADPK----------------EARAGVREVH 332 (885)
Q Consensus 293 -----------~~l~~a~~~~~-~------------~~~~~~~~al~~~~~~~~----------------~~~~~~~~l~ 332 (885)
+.....+.|.. . ..+.|.+.|++..+++.. .....|+.++
T Consensus 454 ~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~ 533 (1151)
T KOG0206|consen 454 WSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLN 533 (1151)
T ss_pred cccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEE
Confidence 11222222221 1 123688888888764211 0235799999
Q ss_pred eecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhcc-CChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----
Q 002743 333 FLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----- 406 (885)
Q Consensus 333 ~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~----- 406 (885)
.++|+|.||||||++++++|+..++||||+.+|++++. +.....++..+++++||.+|||||++|||+++++++
T Consensus 534 iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~ 613 (1151)
T KOG0206|consen 534 VLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNE 613 (1151)
T ss_pred EeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHH
Confidence 99999999999999999999999999999999999998 556678888999999999999999999999988652
Q ss_pred --------------------CCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCC
Q 002743 407 --------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN 466 (885)
Q Consensus 407 --------------------~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~ 466 (885)
+.+|+||+++|.+++||++|+|+|++|+.|++||||+||+|||+.+||.+||.+|++..+
T Consensus 614 ~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~ 693 (1151)
T KOG0206|consen 614 RYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQ 693 (1151)
T ss_pred HHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCC
Confidence 457999999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCccccC---------------------------------------------cccccccCcchHH---HHHH--hcCe
Q 002743 467 MYPSSSLLG---------------------------------------------QDKDASIAALPVD---ELIE--KADG 496 (885)
Q Consensus 467 ~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~---~~~~--~~~v 496 (885)
....-.+.. ......+++++.. ++.. +..+
T Consensus 694 ~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sVi 773 (1151)
T KOG0206|consen 694 DMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVI 773 (1151)
T ss_pred CceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEE
Confidence 332111111 0000011111111 1111 3458
Q ss_pred EEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe-c-cchHHHHhccCEEEcCCCcchHHHHHHHhHH
Q 002743 497 FAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLTSRA 573 (885)
Q Consensus 497 ~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~-g-~~td~a~~aADivl~~~~~~~i~~~i~~gR~ 573 (885)
|||++|.||+.+|+..++. +.++++||||+||++|+++|||||++ | +|.+|+. +||+.+.+++|...+.+| ||||
T Consensus 774 CCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW 851 (1151)
T KOG0206|consen 774 CCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHW 851 (1151)
T ss_pred EccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhh-cccchHHHHHHHhhhhee-ecce
Confidence 9999999999999999854 89999999999999999999999999 4 6666666 999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------------CCCcHHHHHHHHHHhhcc-c-cccccCCCCCC-
Q 002743 574 IFQRMKNYTIYAVSITIRIVLGFMLIALIWK----------------FDFSPFMVLIIAILNDGT-I-MTISKDRVKPS- 634 (885)
Q Consensus 574 ~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~----------------~~~~~~~il~i~i~~d~~-~-~~l~~d~~~~~- 634 (885)
.|.|+.+++.|.+++|+.+.+..+++.++.+ +.|++++++.+++|.... + ..+.++....+
T Consensus 852 ~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g 931 (1151)
T KOG0206|consen 852 SYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRG 931 (1151)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhh
Confidence 9999999999999999999998888877644 345666666666666433 1 22233332222
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 002743 635 PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 714 (885)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~ 714 (885)
++...++.++++.+ ++.|+++++++|++.+..+..+ ....-| ...++....+.+|+.+++..++. ...-+..|.
T Consensus 932 ~~~~~f~~~~f~~~-~~~g~~~sli~Ff~~~~~~~~~-~~~~~G---~~~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT 1005 (1151)
T KOG0206|consen 932 QLNLLFNWKRFWGW-MLDGFYQSLVIFFLPYLVFEEQ-AVTSNG---LTADYWTLGTTVFTIIVIVVNLK-IALETSYWT 1005 (1151)
T ss_pred hhccccchHHHHHH-HHHHHHhheeeeeeeHhhheee-eeccCC---CcCChhhccceEEEEEEEEEEee-eeeeehhee
Confidence 33445666665555 4559999999997777666432 111111 11123333445555544444444 223334566
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHH----hhc----ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHHhcCcchh
Q 002743 715 FIERPGLLLATAFVIAQLVATFIAV----YAN----WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAW 786 (885)
Q Consensus 715 ~~~~~~~~l~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~ 786 (885)
|.+...+|..+++. .++..++.. ..+ .+++........+|+++++..++.++|+-.+|.+.+..+|....
T Consensus 1006 ~i~~i~i~gSi~~~--f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~ 1083 (1151)
T KOG0206|consen 1006 WINHIVIWGSILLW--FVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHD 1083 (1151)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHH
Confidence 65554333322222 222112211 000 11122233345678888899999999999999998888877644
Q ss_pred hh
Q 002743 787 DT 788 (885)
Q Consensus 787 ~~ 788 (885)
..
T Consensus 1084 ~i 1085 (1151)
T KOG0206|consen 1084 II 1085 (1151)
T ss_pred HH
Confidence 33
No 23
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-82 Score=724.90 Aligned_cols=658 Identities=22% Similarity=0.336 Sum_probs=489.8
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeC
Q 002743 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDA 81 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~ 81 (885)
.||+.+...++.+++..-+ +++.+..|+++.+.+...+.+|+++..+.++++-+ ....++|+|||.|++|++
T Consensus 194 L~PfYlFQ~fSv~lW~~d~-------Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S 265 (1140)
T KOG0208|consen 194 LNPFYLFQAFSVALWLADS-------YYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDS 265 (1140)
T ss_pred cchHHHHHhHHhhhhhccc-------chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEec
Confidence 3788888877777766654 66778888899999999999999999998887665 346899999999999999
Q ss_pred CCCCCCcEEEEcC-CCeeeceEEEEeeCCeEEEeccccCCCCccccCCC-------------------Ccccccceeee-
Q 002743 82 SILVPGDVISIKL-GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------------DEVFSGSTCKQ- 140 (885)
Q Consensus 82 ~~Lv~GDiv~l~~-Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------------~~v~~Gs~v~~- 140 (885)
+|||||||+.+.+ |-..|||++|++| +|-||||+|||||.|+.|.+. +.+|.||.+.+
T Consensus 266 ~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~ 344 (1140)
T KOG0208|consen 266 SELVPGDILYIPPPGKIMPCDALLISG-DCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQA 344 (1140)
T ss_pred cccccccEEEECCCCeEeecceEEEeC-cEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEe
Confidence 9999999999998 9999999999999 799999999999999999874 46899999876
Q ss_pred -----CeEEEEEEEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhccccchHhHHHHH
Q 002743 141 -----GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNF--CICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 213 (885)
Q Consensus 141 -----G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (885)
|.+.++|++||.+|..|++.+.+-.. ++.+++-.-+.+..+ +.++.+++ .+..++.+...+.+....+..+
T Consensus 345 r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP~~fkfyrds~~fi~~l~~ia~~g-fiy~~i~l~~~g~~~~~iiirs 422 (1140)
T KOG0208|consen 345 RAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KPVNFKFYRDSFKFILFLVIIALIG-FIYTAIVLNLLGVPLKTIIIRS 422 (1140)
T ss_pred ecCCCCceEEEEEeccccccccHHHHhhcCC-CCcccHHHHHHHHHHHHHHHHHHHH-HHHHhHhHHHcCCCHHHHhhhh
Confidence 45899999999999999877766543 334444443433222 21111111 1112222334577888899999
Q ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecc--cC---
Q 002743 214 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA--KG--- 288 (885)
Q Consensus 214 l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~--~~--- 288 (885)
+-++...+|.|||.++++....+..||.|+||.|-+++.+...|++|++|||||||||++.+.+-.+....-+ .+
T Consensus 423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~ 502 (1140)
T KOG0208|consen 423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPEL 502 (1140)
T ss_pred hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999998765531000 00
Q ss_pred -------------------CCh--HHHHHHHHHHcc-----CcCCChHHHHHHHhcC-----------------------
Q 002743 289 -------------------VEK--EHVILLAARASR-----TENQDAIDAAIVGMLA----------------------- 319 (885)
Q Consensus 289 -------------------~~~--~~~l~~a~~~~~-----~~~~~~~~~al~~~~~----------------------- 319 (885)
..+ .....+|.+++- ...+||+|..+.+.-+
T Consensus 503 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v 582 (1140)
T KOG0208|consen 503 KVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTV 582 (1140)
T ss_pred hhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCE
Confidence 001 112222222221 1235787765544221
Q ss_pred -ChHH--------Hh-cCCceEEeecCCCCCccEEEEEEcC-CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHH
Q 002743 320 -DPKE--------AR-AGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAE 388 (885)
Q Consensus 320 -~~~~--------~~-~~~~~l~~~pf~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~ 388 (885)
+|.+ .. ..+.+++.+||+|.-+||||++.++ +.+...|+|||||.|.+.|+. +.+++.+++.+++|+.
T Consensus 583 ~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~ 661 (1140)
T KOG0208|consen 583 VRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTH 661 (1140)
T ss_pred eCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHh
Confidence 1100 01 1467889999999999999999875 467799999999999999984 5678889999999999
Q ss_pred cCCeEEEEEeeecCCC--------CCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002743 389 RGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 389 ~Glr~l~~a~~~~~~~--------~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~ 460 (885)
+|+|++|+|+|+++.. +++..|++|+|+|++.||+++|++++.+|++|++|.|+++|+||||..||..+||+
T Consensus 662 ~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVake 741 (1140)
T KOG0208|consen 662 QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKE 741 (1140)
T ss_pred CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhc
Confidence 9999999999999876 36788999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCC----------c--------------cc--------------------cCcccccccC-----------cc
Q 002743 461 LGMGTNMYPS----------S--------------SL--------------------LGQDKDASIA-----------AL 485 (885)
Q Consensus 461 lGi~~~~~~~----------~--------------~~--------------------~~~~~~~~~~-----------~~ 485 (885)
||+....... . .. .+.+..-.++ .+
T Consensus 742 Cgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~ 821 (1140)
T KOG0208|consen 742 CGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPE 821 (1140)
T ss_pred ccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHH
Confidence 9995421100 0 00 0000000122 22
Q ss_pred hHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHH
Q 002743 486 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 486 ~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~ 565 (885)
.+++++.+.+||||++|.||.++|+.||+-|+.|+|+|||+||+.|||+||+||+++++. |.-||.+.-.-++.+.++
T Consensus 822 l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 822 LVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHh
Confidence 355667788999999999999999999999999999999999999999999999998654 555788888778999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhhcc-cccccc----CCCCCCCCCCcc
Q 002743 566 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPQPDSW 640 (885)
Q Consensus 566 ~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~d~~-~~~l~~----d~~~~~~~~~~~ 640 (885)
+.|++||..+-.--..+.|...+.+..++..++ ...-+..++-+|.+++.++-..+ +..++. ++..+.|+|.+.
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~-LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L 978 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVVF-LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNL 978 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccc
Confidence 999999997766666666665555433222221 11234567888988888876544 333332 333334444444
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFS 674 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 674 (885)
-.++.+.-.+.+-++..+.-+..+++.....|+.
T Consensus 979 ~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 979 LSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred cccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 3334433333323333333334444445555654
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.6e-81 Score=758.68 Aligned_cols=515 Identities=26% Similarity=0.363 Sum_probs=447.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCC
Q 002743 5 LSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 84 (885)
Q Consensus 5 ~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~L 84 (885)
+-.++.++++.+++++ .|.++.+++++++++..++.++++|+++++++|+++.+++++|+|||++++|++++|
T Consensus 189 ~~~L~~~a~~~a~~~~-------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l 261 (741)
T PRK11033 189 IETLMSVAAIGALFIG-------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADL 261 (741)
T ss_pred ccHHHHHHHHHHHHHc-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHC
Confidence 3345566777777775 789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhh
Q 002743 85 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 164 (885)
Q Consensus 85 v~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~ 164 (885)
+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+|||.++++
T Consensus 262 ~~GDiv~v~~G~~IP~Dg~vi~g-~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~ 340 (741)
T PRK11033 262 RPGDVIEVAAGGRLPADGKLLSP-FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIE 340 (741)
T ss_pred CCCCEEEECCCCEEecceEEEEC-cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHH
Confidence 99999999999999999999999 58999999999999999999999999999999999999999999999999999998
Q ss_pred cc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcC
Q 002743 165 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 243 (885)
Q Consensus 165 ~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~ 243 (885)
++ .+++++|+.++++++++...+++..++.+++++...+.+|..++...+++++++|||+|.+++|++...+..+++|+
T Consensus 341 ~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 341 EAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 87 47899999999999988766555444444444344566788899999999999999999999999999999999999
Q ss_pred CceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHH
Q 002743 244 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKE 323 (885)
Q Consensus 244 ~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~ 323 (885)
|+++|+.+++|+|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+.. ..||++.|+++++.+.
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-- 494 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-- 494 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc--
Confidence 999999999999999999999999999999999998652 2345677888877766544 3599999999876421
Q ss_pred HhcCCceEEeecCCCCCccEEEE-EE-cCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q 002743 324 ARAGVREVHFLPFNPVDKRTALT-YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEI 401 (885)
Q Consensus 324 ~~~~~~~l~~~pf~s~~kr~sv~-~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~ 401 (885)
+. .+||.+..+.+.-. ++ ..+|+. +..|+++.+.+ ..+++.+.++++.++|+|+++++++.
T Consensus 495 ---~~----~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~- 557 (741)
T PRK11033 495 ---GL----AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND- 557 (741)
T ss_pred ---CC----CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-
Confidence 11 24666655554321 11 234543 44689988754 12334556678899999999999854
Q ss_pred CCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccc
Q 002743 402 PEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 481 (885)
Q Consensus 402 ~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~ 481 (885)
+++|+++++|++|||++++|++|+++|++++|+|||+..+|..+|+++||.
T Consensus 558 ------------~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------- 608 (741)
T PRK11033 558 ------------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------- 608 (741)
T ss_pred ------------EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------
Confidence 899999999999999999999999999999999999999999999999983
Q ss_pred cCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCc
Q 002743 482 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 561 (885)
Q Consensus 482 ~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~ 561 (885)
.++++.|+||.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+|+++++||+++.++++
T Consensus 609 --------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 609 --------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRL 673 (741)
T ss_pred --------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCH
Confidence 25778999999999999965 589999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 562 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 594 (885)
Q Consensus 562 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 594 (885)
..++.+++.||++++||++|+.|++.+|...+.
T Consensus 674 ~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 674 RGLAQMIELSRATHANIRQNITIALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999975443
No 25
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-81 Score=717.57 Aligned_cols=539 Identities=24% Similarity=0.335 Sum_probs=451.7
Q ss_pred CCChhh-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCe-EEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 002743 26 DPDWQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADAR 103 (885)
Q Consensus 26 ~~~~~~-~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ 103 (885)
++.++| ..+++.++.+...++.....|+..++..|+...|.++.++.+|+ .++|+.+.|++||+|.+++|++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 444555 45566677788888888888888999999998899999999996 8999999999999999999999999999
Q ss_pred EEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHHHH
Q 002743 104 LLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNF 182 (885)
Q Consensus 104 ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~ 182 (885)
+++| +++||||.+|||++||.|++|+.|.+||.+.+|.....++.+|.+|.+++|.+|+++++ .+.|.|+.+|+++.+
T Consensus 417 Vv~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 9999 68999999999999999999999999999999999999999999999999999999984 889999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhccc----------cchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChh
Q 002743 183 CICSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 252 (885)
Q Consensus 183 ~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~ 252 (885)
+...+++..++.++++.++.. ..+..++..++++++++|||+|.++.|++..+|....+++|+++|..++
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~ 575 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA 575 (951)
T ss_pred CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence 766555534433333322221 3456678888999999999999999999999999999999999999999
Q ss_pred hhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEE
Q 002743 253 IEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVH 332 (885)
Q Consensus 253 ~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~ 332 (885)
+|.+.+++++.||||||||+|++.|.+... .....+..+++.+++..+... .||+..|++.++.+..........++
T Consensus 576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~ 652 (951)
T KOG0207|consen 576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLS 652 (951)
T ss_pred HHHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccce
Confidence 999999999999999999999999998764 333356666776666555444 49999999999864331111112223
Q ss_pred eecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCC
Q 002743 333 FLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAP 412 (885)
Q Consensus 333 ~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~ 412 (885)
+..|....+...+. .+|+. ++-|.-+.+...- ....+.+...+++-...|..+.+++...
T Consensus 653 ~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------ 712 (951)
T KOG0207|consen 653 FEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG------------ 712 (951)
T ss_pred eecccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC------------
Confidence 33333333221222 23433 6779888876422 2234457777788888999999999977
Q ss_pred ceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHH
Q 002743 413 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 492 (885)
Q Consensus 413 l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (885)
+++|++.++|++|||+..+|+.||+.||++.|+||||..+|+++|+++|+.
T Consensus 713 -~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------- 763 (951)
T KOG0207|consen 713 -QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------- 763 (951)
T ss_pred -EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------
Confidence 899999999999999999999999999999999999999999999999963
Q ss_pred hcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhH
Q 002743 493 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 572 (885)
Q Consensus 493 ~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR 572 (885)
+|+|++.|+||.++||.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++||+||+++++..++.++..+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHh
Q 002743 573 AIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILN 619 (885)
Q Consensus 573 ~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~i~~ 619 (885)
++.+|+|.|+.|++.+|+..++...+.++.|++.++|++--..-.+.
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~S 888 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAAS 888 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhh
Confidence 99999999999999999977777777777777778887654444443
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=6.8e-79 Score=712.62 Aligned_cols=475 Identities=36% Similarity=0.538 Sum_probs=418.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHh--cCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEE
Q 002743 36 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 113 (885)
Q Consensus 36 ~~~~~~~~~i~~~~e~~a~~~~~~l~~--~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vd 113 (885)
+++++++.+++.+++++++++.++|++ ..+++++|+||| +++|++++|+|||+|.+++||.|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 456788899999999999999999998 778899999999 99999999999999999999999999999999 79999
Q ss_pred eccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002743 114 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 191 (885)
Q Consensus 114 es~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 191 (885)
||+|||||.|+.|.+||.+++||.+.+|++.+.|+.+|.+|..+++..++.+.. .++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999998 45444333322
Q ss_pred HHHHHHHhhcccc--chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCC
Q 002743 192 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 269 (885)
Q Consensus 192 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGT 269 (885)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222222211112 37789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEEEEEEc
Q 002743 270 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 349 (885)
Q Consensus 270 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~ 349 (885)
||+|+|+|.++... . . ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987631 1 0 123459999999987752 123578999999999998875
Q ss_pred CCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcch
Q 002743 350 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 429 (885)
Q Consensus 350 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~ 429 (885)
.++ .++||+++.+.++|.. +.+..++++++|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999988752 2334556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHH
Q 002743 430 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 509 (885)
Q Consensus 430 ~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 509 (885)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002743 510 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 589 (885)
Q Consensus 510 ~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 589 (885)
+.+|++|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002743 590 IRIVLGFML 598 (885)
Q Consensus 590 i~~~~~~~~ 598 (885)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 875555443
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.9e-77 Score=703.44 Aligned_cols=518 Identities=26% Similarity=0.376 Sum_probs=439.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCC-eEEEEeCCCCC
Q 002743 7 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILV 85 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg-~~~~i~~~~Lv 85 (885)
..+.++++++++++ .|.++.+|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+
T Consensus 3 ~l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 3 LLMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCC
Confidence 45677788888887 89999999999999999999999999999999999999999999996 99999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhc
Q 002743 86 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 165 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~ 165 (885)
|||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.+++++
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 9999999999999999999999 589999999999999999999999999999999999999999999999999999987
Q ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCC
Q 002743 166 T-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 244 (885)
Q Consensus 166 ~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ 244 (885)
+ .+++++|+.+++++++++..++++.++.+++++. ...+ .++..++++++++|||+||+++++++..+..+++++|
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~g 231 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRG 231 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCC
Confidence 6 5789999999999988766554434333333322 2222 7888999999999999999999999999999999999
Q ss_pred ceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCC--hHHHHHHHHHHccCcCCChHHHHHHHhcCChH
Q 002743 245 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPK 322 (885)
Q Consensus 245 ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~ 322 (885)
+++|+++++|.||++|++|||||||||+|+|+|.+... . .+.+ .++++.+++.++.. ..||++.|+++++....
T Consensus 232 ilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~ 307 (556)
T TIGR01525 232 ILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRG 307 (556)
T ss_pred ceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998753 1 2233 66777777666554 45999999998875321
Q ss_pred HHhcCCc-eEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeec
Q 002743 323 EARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEI 401 (885)
Q Consensus 323 ~~~~~~~-~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~ 401 (885)
..... + ..+++| .+.....+ +|. ..+..|+++.+ + ... .+ .+..+..+++++++|+|+++++.+.
T Consensus 308 ~~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~- 373 (556)
T TIGR01525 308 LELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG- 373 (556)
T ss_pred CCccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC-
Confidence 10000 1 112221 11222221 341 35667888876 1 111 11 1223455677889999999999754
Q ss_pred CCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCccccc
Q 002743 402 PEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480 (885)
Q Consensus 402 ~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aG-I~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~ 480 (885)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 ------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~---------------- 425 (556)
T TIGR01525 374 ------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------------- 425 (556)
T ss_pred ------------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC----------------
Confidence 899999999999999999999999999 999999999999999999999984
Q ss_pred ccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 481 ~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.+|+++.|++|.++++.+|+.++.|+|+|||.||+||+++||+||++|++++.++++||+++.+++
T Consensus 426 --------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~ 491 (556)
T TIGR01525 426 --------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDD 491 (556)
T ss_pred --------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCC
Confidence 258899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 561 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595 (885)
Q Consensus 561 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 595 (885)
++.+..++++||++++|+++++.|++.+|+..+..
T Consensus 492 ~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 492 LSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999865543
No 28
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.1e-77 Score=699.03 Aligned_cols=500 Identities=30% Similarity=0.413 Sum_probs=430.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCC
Q 002743 7 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVP 86 (885)
Q Consensus 7 ~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~ 86 (885)
.++.++++++++++ +|.++.+|+++++++..+++++++|+.+++++|++..+++++|+|||+++++++++|+|
T Consensus 3 ~l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 45778888889887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc
Q 002743 87 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 166 (885)
Q Consensus 87 GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 166 (885)
||+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++.
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~ 154 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA 154 (536)
T ss_pred CCEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH
Confidence 999999999999999999999 6799999999999999999999999999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCc
Q 002743 167 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 245 (885)
Q Consensus 167 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~i 245 (885)
.+++++|+.+++++++++..++++.++.+++++... .+..++..++++++++|||+||+++++++..+..+++++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gi 232 (536)
T TIGR01512 155 QSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGI 232 (536)
T ss_pred hhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCe
Confidence 578899999999998876665554444344333222 23347888999999999999999999999999999999999
Q ss_pred eeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHh
Q 002743 246 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEAR 325 (885)
Q Consensus 246 lvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~ 325 (885)
++|+++++|++|++|++|||||||||+|+|+|.+... .+++.+++..+. ...||++.|+++++.+.+
T Consensus 233 lik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~--- 299 (536)
T TIGR01512 233 LIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE--- 299 (536)
T ss_pred EEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999988642 256777665444 445999999998875321
Q ss_pred cCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC
Q 002743 326 AGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 405 (885)
Q Consensus 326 ~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~ 405 (885)
.....+.+|. +..... .+|+ .+..|+++.+.+.. .+.+..+|.+++.++.+
T Consensus 300 -~~~~~~~~~g----~gi~~~---~~g~--~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~------ 350 (536)
T TIGR01512 300 -NVESVEEVPG----EGVRAV---VDGG--EVRIGNPRSLEAAV-------------GARPESAGKTIVHVARD------ 350 (536)
T ss_pred -CCcceEEecC----CeEEEE---ECCe--EEEEcCHHHHhhcC-------------CcchhhCCCeEEEEEEC------
Confidence 2222333331 111111 2454 34568887653311 01456678888877754
Q ss_pred CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCc
Q 002743 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 484 (885)
Q Consensus 406 ~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI-~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~ 484 (885)
..++|.+.++|++|||++++|++|+++|+ +++|+|||+..++..+++++|+..
T Consensus 351 -------~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------- 404 (536)
T TIGR01512 351 -------GTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------- 404 (536)
T ss_pred -------CEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------------
Confidence 38999999999999999999999999999 999999999999999999999842
Q ss_pred chHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEec-cchHHHHhccCEEEcCCCcch
Q 002743 485 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 485 ~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~td~a~~aADivl~~~~~~~ 563 (885)
+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.++++..
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 47888999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 564 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 595 (885)
Q Consensus 564 i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 595 (885)
+.+++..||++++|+++++.|++.+|+..+..
T Consensus 474 l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 474 LPQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999754433
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.6e-76 Score=697.00 Aligned_cols=506 Identities=26% Similarity=0.380 Sum_probs=425.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC-CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 106 (885)
Q Consensus 28 ~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~ 106 (885)
+|..+.+++++++++..++.+.++|+++++++|++..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||++++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455666677888888889899999999999999999999999985 778999999999999999999999999999999
Q ss_pred eCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002743 107 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 185 (885)
Q Consensus 107 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~ 185 (885)
| ++.||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5799999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeec
Q 002743 186 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 265 (885)
Q Consensus 186 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~D 265 (885)
.+++..++. ++.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~-~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALIT-FVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHH-HHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 544433222 2222 24788999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEEE
Q 002743 266 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 345 (885)
Q Consensus 266 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~sv 345 (885)
||||||+|+|++.++.. ..+.+.++++.+++..+...+ ||++.|+++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998752 224566788888877665554 9999999988743211111122222222 122222
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCC
Q 002743 346 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 425 (885)
Q Consensus 346 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~l 425 (885)
. .+| ..+..|+++.+.+... . +.++.++|.+++.++... +++|++.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 244 4567899998643211 1 112456899999887654 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcH
Q 002743 426 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 505 (885)
Q Consensus 426 r~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 505 (885)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHH
Q 002743 506 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 585 (885)
Q Consensus 506 ~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 585 (885)
.++++.+|++++.|+|+|||.||+||+++||+||+||.|++.++++||+++.++++..+..+++.||++++++++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcHH
Q 002743 586 VSITIRIVLGFMLIALIWKFDFSPF 610 (885)
Q Consensus 586 ~~~ni~~~~~~~~~~~~~~~~~~~~ 610 (885)
+.+|+..+...+...+.+++.++|.
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655554444444445553
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.2e-75 Score=718.84 Aligned_cols=521 Identities=24% Similarity=0.305 Sum_probs=437.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEee
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 107 (885)
Q Consensus 28 ~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g 107 (885)
+|..+..+++++.++.+++.+.+.|+.+++++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||++++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002743 108 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 108 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 186 (885)
++.||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+||+.++++++ ..++++|+..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 47889999999999887655
Q ss_pred HHHHHHHHHHHHhhcccc--chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEee
Q 002743 187 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 264 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~ 264 (885)
+++..++.+++ |+..+. .+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++||
T Consensus 444 v~~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 54433333333 332222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCCCCccEE
Q 002743 265 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 344 (885)
Q Consensus 265 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s~~kr~s 344 (885)
|||||||+|+|+|.+... ..+.++++++.+++..+...+ ||++.|+++++.+.. .... .+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecce-E
Confidence 999999999999987642 224567777887777665544 999999998764210 0111 122222211 1
Q ss_pred EEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCC
Q 002743 345 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 424 (885)
Q Consensus 345 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~ 424 (885)
+... .+|+ .+.+|+++.+.+.... .+.+.+.++++.++|.+++.++++. +++|++.+.|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2453 4567999987542211 2345666778889999999999865 79999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhc
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 504 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 504 (885)
+|||++++|++|++.|+++.|+|||+..+|..+++++|+.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 588999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHH
Q 002743 505 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 584 (885)
Q Consensus 505 K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 584 (885)
|.++++.+|++++.|+|+|||.||+||+++||+||+||+|+|.++++||++++++++..|..++++||+++++|++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCCcHHHH
Q 002743 585 AVSITIRIVLGFMLIALI-WKFDFSPFMV 612 (885)
Q Consensus 585 ~~~~ni~~~~~~~~~~~~-~~~~~~~~~i 612 (885)
++.+|+..+...++.+.. +++.++|+.-
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHH
Confidence 999998665544322211 2334666543
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-75 Score=643.13 Aligned_cols=734 Identities=20% Similarity=0.268 Sum_probs=507.3
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEE-EeCCeEEEEe
Q 002743 2 WNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKV-LRDGRWSEQD 80 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V-~rdg~~~~i~ 80 (885)
.|.+++++.++.++-.+.- +....+|...++++.+.++...++-++++++.+.. ++.+.++ -|||...+ +
T Consensus 107 ~nlyfll~alsQ~ip~~~i--g~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~------Nse~y~~ltr~~~~~~-~ 177 (1051)
T KOG0210|consen 107 LNLYFLLVALSQLIPALKI--GYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDREL------NSEKYTKLTRDGTRRE-P 177 (1051)
T ss_pred HHHHHHHHHHHhhCchhee--cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhh------hhhhheeeccCCcccc-c
Confidence 4555555555555444321 11123566666666666666666666666665532 2344444 47876655 9
Q ss_pred CCCCCCCcEEEEcCCCeeeceEEEEeeC----CeEEEeccccCCCCccccCC----------------------------
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNP---------------------------- 128 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~---------------------------- 128 (885)
++++++||+|.++.+++||||.++++.+ +|+|-+-.|+||+.-+-|-|
T Consensus 178 Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh 257 (1051)
T KOG0210|consen 178 SSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIH 257 (1051)
T ss_pred ccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhH
Confidence 9999999999999999999999999532 69999999999997665533
Q ss_pred -------------------CCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhcc---CCCCcHHHHHHHHHHHHHHH
Q 002743 129 -------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST---NQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 129 -------------------~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~---~~~~~~~~~~~~i~~~~~~~ 186 (885)
.|+++++|.+.+|.+.|+|++||.+|. ..++.+ .+.+.++..+|.+.+.+.+.
T Consensus 258 ~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR-----svMNts~pr~KvGllelEiN~ltKiL~~~ 332 (1051)
T KOG0210|consen 258 SFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR-----SVMNTSRPRSKVGLLELEINGLTKILFCF 332 (1051)
T ss_pred hhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH-----HHhccCCcccccceeeeecccHHHHHHHH
Confidence 257999999999999999999999995 334433 36677888888888876554
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcC----CceeccChhhhhccCceEE
Q 002743 187 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ----GAITKRMTAIEEMAGMDVL 262 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~----~ilvk~~~~~E~Lg~v~~I 262 (885)
+++..+ .++..-..+.+|...+..++.++...||++|-+.+.+++.+-++.+.++ |.++|+.+.-|+||.++++
T Consensus 333 vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsyl 410 (1051)
T KOG0210|consen 333 VLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYL 410 (1051)
T ss_pred HHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEE
Confidence 443222 2223334567888889999999999999999999999999999888764 6889999999999999999
Q ss_pred eeccCCCCCCCceEEEEEeeeecccCCCh-----------------------------------HHHHHHHHHHccCc--
Q 002743 263 CSDKTGTLTLNKLTVDRNLIEVFAKGVEK-----------------------------------EHVILLAARASRTE-- 305 (885)
Q Consensus 263 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-----------------------------------~~~l~~a~~~~~~~-- 305 (885)
.+|||||||+|+|.+++++....+.+.+. +.+..+|.+++-.+
T Consensus 411 LtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~ 490 (1051)
T KOG0210|consen 411 LTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVF 490 (1051)
T ss_pred EecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCccc
Confidence 99999999999999999887533322111 11223333332211
Q ss_pred ---------CCChHHHHHHHhcC-----------------ChHHHhcCCceEEeecCCCCCccEEEEEEcC-CCcEEEEE
Q 002743 306 ---------NQDAIDAAIVGMLA-----------------DPKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRAS 358 (885)
Q Consensus 306 ---------~~~~~~~al~~~~~-----------------~~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~-~g~~~~~~ 358 (885)
..+|.|.|+++.-. .+......|++++.+||+|+.|||.++++++ .|+...+.
T Consensus 491 e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfyl 570 (1051)
T KOG0210|consen 491 EDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYL 570 (1051)
T ss_pred CCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEE
Confidence 11344444443211 1111224789999999999999999999986 68899999
Q ss_pred cCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCC--------------------------CCCCC
Q 002743 359 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKE--------------------------SPGAP 412 (885)
Q Consensus 359 KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~--------------------------~~e~~ 412 (885)
|||+.+|-...+. .+++++...+||++|+|||.+|.|.+++++++ .+|.+
T Consensus 571 KGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~d 646 (1051)
T KOG0210|consen 571 KGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERD 646 (1051)
T ss_pred ecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhh
Confidence 9999998877664 35777888999999999999999999876521 36899
Q ss_pred ceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc----------------Cc
Q 002743 413 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL----------------GQ 476 (885)
Q Consensus 413 l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~----------------~~ 476 (885)
|+++|+++.||++|+|++.+++.||+||||+||+|||+.+||+.||++.++.+......++. ..
T Consensus 647 lelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k 726 (1051)
T KOG0210|consen 647 LELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRK 726 (1051)
T ss_pred hHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999965322111110 00
Q ss_pred c-cccccCcc-----------hHHHHHHh--cCeEEeeChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 477 D-KDASIAAL-----------PVDELIEK--ADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 477 ~-~~~~~~~~-----------~~~~~~~~--~~v~ar~sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
. ..-.++++ ++-++..+ +.++||++|+||+++++.+|++ |..|+++|||.||+.|+++||+||++
T Consensus 727 ~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI 806 (1051)
T KOG0210|consen 727 TDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI 806 (1051)
T ss_pred CCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee
Confidence 0 00012222 33333332 4589999999999999999986 89999999999999999999999999
Q ss_pred -c-cchHHHHhccCEEEcCCCcchHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcH-------HH
Q 002743 542 -A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSP-------FM 611 (885)
Q Consensus 542 -g-~~td~a~~aADivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~-------~~ 611 (885)
| +|.+ |.-|||+.+++ |+.+-.++ -|||..|+|-.+.-+|.+-....+..+..++... +.|.| ++
T Consensus 807 ~gkEGkQ-ASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v--~yF~~V~LyqG~Lm 881 (1051)
T KOG0210|consen 807 VGKEGKQ-ASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSV--FYFAPVALYQGFLM 881 (1051)
T ss_pred ecccccc-cchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHH--hhhcchHHhhhhHH
Confidence 6 5555 45599999987 55555543 3899999999998888766555444333333221 11222 33
Q ss_pred HHHHHHHhhccccccccCCCCCC-------------CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 002743 612 VLIIAILNDGTIMTISKDRVKPS-------------PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFG 678 (885)
Q Consensus 612 il~i~i~~d~~~~~l~~d~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 678 (885)
+.+..+.+-.+..++-.|+.-.+ .+......+.++.| +++++|+..+...++++.+.+.|+
T Consensus 882 vgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw-vLISiYQG~vim~g~~~l~~~ef~----- 955 (1051)
T KOG0210|consen 882 VGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW-VLISIYQGSVIMYGALLLFDTEFI----- 955 (1051)
T ss_pred HHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh-hhHHHHcccHHHHHHHHHhhhhhe-----
Confidence 44455555455566666653211 12233344555555 445888887777655555433221
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHH-hhhccCCCCcccchhHHHHHHHHHHHHHHHHHH----Hhhcccccccccchh
Q 002743 679 VRSLRTRPDEMMAALYLQVSIISQALI-FVTRSRSWSFIERPGLLLATAFVIAQLVATFIA----VYANWSFARIEGCGW 753 (885)
Q Consensus 679 ~~~~~~~~~~~~t~~f~~~~~~~~~~~-~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 753 (885)
...++.|..+++.....+ +-+++ |.| .++.+-++++.+..+.. -|..+.| -.+|
T Consensus 956 ---------~ivaisFtaLi~tELiMVaLtv~t--w~~------~m~vae~lsL~~Yivsl~~l~~yfd~~f----~~~~ 1014 (1051)
T KOG0210|consen 956 ---------HIVAISFTALILTELIMVALTVRT--WHW------LMVVAELLSLALYIVSLAFLHEYFDRYF----ILTY 1014 (1051)
T ss_pred ---------EeeeeeeHHHHHHHHHHHhhhhhh--hhH------HHHHHHHHHHHHHHHHHHHHHhHHHHHH----HHHH
Confidence 223555666666665543 33343 332 23334333332211111 1111111 1345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHhcCcchhh
Q 002743 754 GWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWD 787 (885)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 787 (885)
.+++-+.++.++..+|..+.|.++|+..||+..+
T Consensus 1015 ~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 1015 VFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 5555556777788889999999999999988654
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-66 Score=578.83 Aligned_cols=519 Identities=25% Similarity=0.290 Sum_probs=392.5
Q ss_pred chHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC--CCceEEEeCCeEEEEe
Q 002743 3 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANL--APKTKVLRDGRWSEQD 80 (885)
Q Consensus 3 ~p~~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~--~~~~~V~rdg~~~~i~ 80 (885)
.|++........++..-. +|+..++-+++++....--..|+.+ .+..++++- +....|.|+++|+.+.
T Consensus 198 aPfFVFQVFcvgLWCLDe-------yWYySlFtLfMli~fE~tlV~Qrm~---~lse~R~Mg~kpy~I~v~R~kKW~~l~ 267 (1160)
T KOG0209|consen 198 APFFVFQVFCVGLWCLDE-------YWYYSLFTLFMLIAFEATLVKQRMR---TLSEFRTMGNKPYTINVYRNKKWVKLM 267 (1160)
T ss_pred CceeeHhHHhHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhcCCCceEEEEEecCcceecc
Confidence 366666666666766654 8999888887776664444445444 444454443 4568899999999999
Q ss_pred CCCCCCCcEEEEcC---CCeeeceEEEEeeCCeEEEeccccCCCCccccCCC-----------------Ccccccceeee
Q 002743 81 ASILVPGDVISIKL---GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ 140 (885)
Q Consensus 81 ~~~Lv~GDiv~l~~---Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-----------------~~v~~Gs~v~~ 140 (885)
++||.|||+|.+.. ...||||.+|+.| +|.|||++|||||.|.-|.+- ..+|.||.+++
T Consensus 268 seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQ 346 (1160)
T KOG0209|consen 268 SEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQ 346 (1160)
T ss_pred ccccCCCceEEeccCcccCcCCceEEEEec-ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEE
Confidence 99999999999987 6789999999999 799999999999999999761 36899999875
Q ss_pred -------------CeEEEEEEEeccchhhhhHhhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Q 002743 141 -------------GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH--- 203 (885)
Q Consensus 141 -------------G~~~~~V~~tG~~T~~gki~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~--- 203 (885)
|-+.+.|++||.+|.-|++.+-+-- +++.+.-.+ +. +++++.+ +++.++..++.|.
T Consensus 347 ht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~--Et---f~FILFL--lVFAiaAa~Yvwv~Gs 419 (1160)
T KOG0209|consen 347 HTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNR--ET---FIFILFL--LVFAIAAAGYVWVEGS 419 (1160)
T ss_pred ecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccH--HH---HHHHHHH--HHHHHHhhheEEEecc
Confidence 5589999999999999987775543 333222111 11 1111111 1111122222221
Q ss_pred ----cchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEE
Q 002743 204 ----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR 279 (885)
Q Consensus 204 ----~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~ 279 (885)
++-...++-+..++...+|.-||+-++++.-.+...|+|.+++|..+=.+--.|++|+-|||||||||+..|.|..
T Consensus 420 kd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 420 KDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred cCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 1222345566677888999999999999998888999999999999999999999999999999999999999987
Q ss_pred Eeeeecc-------cCCChHHHHHHHHHHcc-----CcCCChHHHHHHHhcCChHH----------HhcCCceEEeecCC
Q 002743 280 NLIEVFA-------KGVEKEHVILLAARASR-----TENQDAIDAAIVGMLADPKE----------ARAGVREVHFLPFN 337 (885)
Q Consensus 280 ~~~~~~~-------~~~~~~~~l~~a~~~~~-----~~~~~~~~~al~~~~~~~~~----------~~~~~~~l~~~pf~ 337 (885)
+.-.... ...+.+.+..+|++++- .-.+||+|+|.++.++..-+ ...+.++.+-+.|+
T Consensus 500 vag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFs 579 (1160)
T KOG0209|consen 500 VAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFS 579 (1160)
T ss_pred cccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHH
Confidence 5420000 01122344555554432 23469999999998742111 11246677888999
Q ss_pred CCCccEEEEEEcC----CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCC--------CC
Q 002743 338 PVDKRTALTYIDS----DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KT 405 (885)
Q Consensus 338 s~~kr~sv~~~~~----~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~--------~~ 405 (885)
|.-|||+++..-. +-+++..+|||||.|-++.. ++++.+++...+++++|.||||++||.++. -+
T Consensus 580 SaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~ 656 (1160)
T KOG0209|consen 580 SALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLK 656 (1160)
T ss_pred HHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhh
Confidence 9999999887532 13678899999999988775 466788888999999999999999999873 24
Q ss_pred CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC---------c-----
Q 002743 406 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS---------S----- 471 (885)
Q Consensus 406 ~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~---------~----- 471 (885)
+|+.|++|+|.|++.|.-|+|+|++++|++|++.+.+++||||||+.||.++|+++|+....-.. .
T Consensus 657 Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~ 736 (1160)
T KOG0209|consen 657 REDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWV 736 (1160)
T ss_pred hhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEe
Confidence 67899999999999999999999999999999999999999999999999999999996431100 0
Q ss_pred c-------------------------ccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCc
Q 002743 472 S-------------------------LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV 526 (885)
Q Consensus 472 ~-------------------------~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~ 526 (885)
. ++|...+.....+.+.+++..+.||||+.|.||..++..|++.|+.++|||||.
T Consensus 737 s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGT 816 (1160)
T KOG0209|consen 737 SVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGT 816 (1160)
T ss_pred cCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCC
Confidence 0 011111111122345667777889999999999999999999999999999999
Q ss_pred CChhhhhcCCeeEEec
Q 002743 527 NDAPALKKADIGIAVA 542 (885)
Q Consensus 527 NDa~aLk~AdvGIa~g 542 (885)
||+.|||+||||||+=
T Consensus 817 NDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 817 NDVGALKQAHVGVALL 832 (1160)
T ss_pred cchhhhhhcccceehh
Confidence 9999999999999984
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-63 Score=536.46 Aligned_cols=518 Identities=25% Similarity=0.373 Sum_probs=406.5
Q ss_pred cchHHHHHHHHHHHHHHHh-cC---CCCCCChhhHHHHHHHHHHHHHHH----HHHHHhHHHHHHHHHhcC-CCceEEEe
Q 002743 2 WNPLSWVMEAAAIMAIALA-NG---GGRDPDWQDFVGIIVLLVINSTIS----FIEENNAGNAAAALMANL-APKTKVLR 72 (885)
Q Consensus 2 ~~p~~~~l~~aai~~~~~~-~~---~~~~~~~~~~~~i~~~~~~~~~i~----~~~e~~a~~~~~~l~~~~-~~~~~V~r 72 (885)
.||..++.++.++++.++. .+ ++...++...+.|.+++.+..++. .+.|-|.+-..++|++.. ...+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 6999999999999988432 11 111123333333444444444444 444444444455665533 33567777
Q ss_pred C-CeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCC---CcccccceeeeCeEEEEEE
Q 002743 73 D-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAVVI 148 (885)
Q Consensus 73 d-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gs~v~~G~~~~~V~ 148 (885)
+ |.++.+++.+|+.||+|.++.||+||+||.++|| ..+||||++||||-||-|.+| +.|-.||.+.+..++.+++
T Consensus 111 ~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irit 189 (681)
T COG2216 111 ADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRIT 189 (681)
T ss_pred CCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEE
Confidence 5 9999999999999999999999999999999999 689999999999999999998 6799999999999999999
Q ss_pred EeccchhhhhHhhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccchHhHHHHHHHHHHHHcCCch
Q 002743 149 ATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPIAM 225 (885)
Q Consensus 149 ~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~llv~~iP~aL 225 (885)
+.-.+|++.|+..+++.+ .+++|-+--++-+..-+. ++ +++...-.|++. ...-.-.+...++++++.||-..
T Consensus 190 a~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---li-FL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTI 265 (681)
T COG2216 190 ANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LI-FLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265 (681)
T ss_pred cCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HH-HHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcccH
Confidence 999999999999999987 466765544333211111 11 111111122211 10111346677899999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCc
Q 002743 226 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 305 (885)
Q Consensus 226 ~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 305 (885)
.--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|.=.-.++. ...+.+.+++...+..++-..
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~D 342 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLAD 342 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhcc
Confidence 88888888889999999999999999999999999999999999999876555554 245788888887777666443
Q ss_pred CCChHHHHHHHhcCChH-HHh-cCCc-eEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCCh-HHHHHHHH
Q 002743 306 NQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHA 381 (885)
Q Consensus 306 ~~~~~~~al~~~~~~~~-~~~-~~~~-~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~ 381 (885)
. .|-.++++..+.+.. +.+ +... .-+++||+...++..+-. +++ ..+.|||.+.+.+..+... ..++.+++
T Consensus 343 e-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~ 417 (681)
T COG2216 343 E-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDA 417 (681)
T ss_pred C-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHH
Confidence 3 565666666553221 111 1111 357899988776555432 233 6788999999998876433 36788899
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002743 382 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 461 (885)
Q Consensus 382 ~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l 461 (885)
..++-++.|-..|+++... +++|++.+.|-++||.+|-+++||+.|||.+|+||||+.||..||++.
T Consensus 418 ~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA 484 (681)
T COG2216 418 AVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 484 (681)
T ss_pred HHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh
Confidence 9999999999999999866 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 462 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 462 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
|+++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+||
T Consensus 485 GVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 485 GVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred Cchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 9853 3789999999999999999999999999999999999999999999
Q ss_pred ccchHHHHhccCEEEcCCCcchHHHHHHHhHHHH
Q 002743 542 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 575 (885)
Q Consensus 542 g~~td~a~~aADivl~~~~~~~i~~~i~~gR~~~ 575 (885)
.+||++||||+.+|=+|.|...+++.++.|++..
T Consensus 535 NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 535 NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred ccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 9999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=8.2e-36 Score=314.65 Aligned_cols=221 Identities=35% Similarity=0.513 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCc-eEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEE
Q 002743 34 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 112 (885)
Q Consensus 34 ~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~V 112 (885)
+++++++++.++++++++|+++.++++++..+++ ++|+|||+++++++++|+|||+|.+++||.+||||++++.+.++|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 4678889999999999999999999999988887 999999999999999999999999999999999999999338999
Q ss_pred EeccccCCCCccccC-----CCCcccccceeeeCeEEEEEEEeccchhhhhHhhhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002743 113 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 113 des~LTGEs~pv~K~-----~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 186 (885)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|+.|++.+.+.... +++++++.++++..++...
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999987764 5689999999999887655
Q ss_pred HHHHHHHHHHHHhhc--cccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhcCCceeccChhhhh
Q 002743 187 IAVGIVAEIIIMYPV--QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 255 (885)
Q Consensus 187 i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~~E~ 255 (885)
++++.++.+ +.++. ...++...+..++++++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 544343333 33333 567788899999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=2.6e-26 Score=238.96 Aligned_cols=211 Identities=32% Similarity=0.412 Sum_probs=151.8
Q ss_pred ceEEeeccCCCCCCCceEEEEEeeeecccCCChHHHHHHHHHHccCcCCChHHHHHHHhcCChHHHhcCCceEEeecCCC
Q 002743 259 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 338 (885)
Q Consensus 259 v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pf~s 338 (885)
|++||||||||||+|++.+ . . .+...++..+...+...+ ||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 445556666655544444 99999998877543222 11 122222
Q ss_pred CCccEEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEe
Q 002743 339 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 418 (885)
Q Consensus 339 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~ 418 (885)
...++..... ++. +. |+++.+.+..... .. ...........|...+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--IS--PDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--cc--cchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222222211 122 22 8888876654321 11 11112223445555555554 3489999
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
+.+.|+||||++++|+.|+++|++++|+|||+..+|..+++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999932 13799
Q ss_pred ee--ChhcH--HHHHHHHhhcCCEEEEEcCCcCChhhhhcCC
Q 002743 499 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 536 (885)
Q Consensus 499 r~--sP~~K--~~iV~~lq~~g~~V~miGDG~NDa~aLk~Ad 536 (885)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.59 E-value=5.7e-15 Score=133.70 Aligned_cols=123 Identities=26% Similarity=0.394 Sum_probs=107.3
Q ss_pred eeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHh
Q 002743 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 414 ~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
...+.++---++=++++++|++|++. +++.+.|||...+-...|.-.|++.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777788889999999999999 99999999999999999999998643
Q ss_pred cCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe-c--cchHHHHhccCEEEcCCCcchHHHH
Q 002743 494 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 494 ~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~-g--~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
++|+...|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +..+-+.++||+++-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47999999999999999999999999999999999999999999987 4 4566677999999954 4444443
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.25 E-value=2.5e-08 Score=112.04 Aligned_cols=210 Identities=18% Similarity=0.208 Sum_probs=142.4
Q ss_pred CCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-----------CCccc------
Q 002743 411 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------ 473 (885)
Q Consensus 411 ~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-----------~~~~~------ 473 (885)
.+-.|.|++...-++|++....|+.|-++-|+.+-.+-.++...+-.|.++||..... +....
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 3457899999999999999999999999999999999999999999999999964211 10000
Q ss_pred -----------------cCccccc--------------ccC--------cchHHHH-----------------HHhcCeE
Q 002743 474 -----------------LGQDKDA--------------SIA--------ALPVDEL-----------------IEKADGF 497 (885)
Q Consensus 474 -----------------~~~~~~~--------------~~~--------~~~~~~~-----------------~~~~~v~ 497 (885)
...+.+. .++ +.++.++ -.-+..|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 0000000 000 0001000 0011358
Q ss_pred EeeChhcHHHHHHHHhhcCCEEEEEcCCcCCh--hhhhcCCeeEEecc-------------chHH--HH-----------
Q 002743 498 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDA--AR----------- 549 (885)
Q Consensus 498 ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa--~aLk~AdvGIa~g~-------------~td~--a~----------- 549 (885)
..++|+.--++++.+|+.|++|+.+|...|-. --.-+|||+|++.. ++.. |+
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 88999999999999999999999999999843 34578999999842 1111 11
Q ss_pred -----hccCEEEcCCCcchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHHhh
Q 002743 550 -----SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILND 620 (885)
Q Consensus 550 -----~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~i~~d 620 (885)
-+.|+-+.+..+-.|..+|+..|....-+|+.++|.+.......+..+. .+++.+..|+--+++|...|--
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 1223333333445677888889999999999999998887755544443 3444566666667777766654
No 38
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.21 E-value=2.1e-10 Score=116.49 Aligned_cols=166 Identities=16% Similarity=0.169 Sum_probs=111.8
Q ss_pred cCCCcHHHHHHHHHHhhcc-ccccccCCCCCC-----CCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 002743 604 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 675 (885)
Q Consensus 604 ~~~~~~~~il~i~i~~d~~-~~~l~~d~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 675 (885)
|.|++|+|+||+|+++|.+ ++++++|++++. |++ ++.-.++++...+..|+++++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999988 699999987653 221 222235567777888999999999887766541
Q ss_pred ccCccc--cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002743 676 AFGVRS--LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 747 (885)
Q Consensus 676 ~~g~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 747 (885)
+|... ...+....+|+.|..+++++.++.+++|+++.+.+. +.|.+++++++++.++..+ .+|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQIL-IVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHH-HHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHH-HhcchhhHhhhc
Confidence 22111 011244689999999999999999999996533221 2355777777766555433 35543 22345
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002743 748 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 776 (885)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 776 (885)
+.+.++.+|+.+++++++.++..|+.|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 67788888888899999999999999974
No 39
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.98 E-value=2.7e-09 Score=109.90 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=97.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+.-.+.+ . ...++ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~-~--g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD-S--DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEec-C--CeeEC------------eeecCcc
Confidence 57999999999999975 9999999999999999999999642211111100 0 00000 0114578
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHh
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 571 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~g 571 (885)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+++.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998666666655555444 4577777776554
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.90 E-value=5.6e-09 Score=114.86 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=98.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+.-.+..+ ..++.... .-+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~v~g---------~iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGNVLG---------DIVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeEecC---------ccCCcc
Confidence 57899999999999999999999999988888999999985311100000000 00000000 002346
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 899988888754 3 5799999999999999999999999 88899999999999988888887665
No 41
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.86 E-value=2.1e-08 Score=105.73 Aligned_cols=145 Identities=25% Similarity=0.332 Sum_probs=102.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCcc-c-c---Cc-----c----------------
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-L-L---GQ-----D---------------- 477 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~~-~-~---~~-----~---------------- 477 (885)
+.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... .+.. + . +. .
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999853211 0000 0 0 00 0
Q ss_pred --------ccc-----------ccCcchHHHHHHhcC--e-------EEeeChhc--HHHHHHHHhhc----CCEEEEEc
Q 002743 478 --------KDA-----------SIAALPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER----KHICGMTG 523 (885)
Q Consensus 478 --------~~~-----------~~~~~~~~~~~~~~~--v-------~ar~sP~~--K~~iV~~lq~~----g~~V~miG 523 (885)
... ....+++.+.+++.. + +..+.|.. |..-++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 000 000012222222211 1 22444443 77777777654 34689999
Q ss_pred CCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 524 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 524 DG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
|+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999998888888888774
No 42
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.83 E-value=1.2e-08 Score=106.69 Aligned_cols=129 Identities=21% Similarity=0.284 Sum_probs=94.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe-eCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 502 (885)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +....... +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998541 11100000 000000 00001 123
Q ss_pred hcHHHHHHHHhhcC----CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 503 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 503 ~~K~~iV~~lq~~g----~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
..|.++++.+.++. ..|.|+||+.||.+|+++|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35889999999999999999999985 567788899999999998877653
No 43
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.81 E-value=3.5e-08 Score=106.72 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=56.4
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++-.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666543 2 46899999999999999999999999999999999999998888888888774
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.79 E-value=1.6e-08 Score=105.63 Aligned_cols=144 Identities=20% Similarity=0.267 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCc-cccC--cc------ccc-------------
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLG--QD------KDA------------- 480 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~-~~~~--~~------~~~------------- 480 (885)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... .+. .+.. .. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999863211 000 0000 00 000
Q ss_pred --------------ccCc---chHHHHHHhcCe-------EEeeCh--hcHHHHHHHHhhc-C---CEEEEEcCCcCChh
Q 002743 481 --------------SIAA---LPVDELIEKADG-------FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAP 530 (885)
Q Consensus 481 --------------~~~~---~~~~~~~~~~~v-------~ar~sP--~~K~~iV~~lq~~-g---~~V~miGDG~NDa~ 530 (885)
..+. +.+.+.+.+..+ +..++| .+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 112222222111 123333 4788888887664 2 35899999999999
Q ss_pred hhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 531 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 531 aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
|++.|++|+||+++.+.+++.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987766666543
No 45
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.79 E-value=3e-08 Score=107.42 Aligned_cols=146 Identities=15% Similarity=0.157 Sum_probs=99.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CC---------ccc--------------------
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PS---------SSL-------------------- 473 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~---------~~~-------------------- 473 (885)
.+.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... .+ ..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999853211 00 000
Q ss_pred -------cC------ccccc------------------cc------------CcchHHH---HHHh-----cC------e
Q 002743 474 -------LG------QDKDA------------------SI------------AALPVDE---LIEK-----AD------G 496 (885)
Q Consensus 474 -------~~------~~~~~------------------~~------------~~~~~~~---~~~~-----~~------v 496 (885)
.. ..... .. +.+.+++ .+.+ .. -
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 00000 00 0001111 1110 00 0
Q ss_pred EEeeChh--cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCE--EEcCCCcchHHHHH
Q 002743 497 FAGVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAV 568 (885)
Q Consensus 497 ~ar~sP~--~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADi--vl~~~~~~~i~~~i 568 (885)
+..++|. .|..-++.|.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||. |..+++-.++..++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 2233443 477777777654 2 46999999999999999999999999999999999996 66677777877777
Q ss_pred H
Q 002743 569 L 569 (885)
Q Consensus 569 ~ 569 (885)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 3
No 46
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.78 E-value=6.3e-08 Score=104.44 Aligned_cols=154 Identities=22% Similarity=0.223 Sum_probs=107.7
Q ss_pred EeeccCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------Cccc-------------
Q 002743 417 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSSL------------- 473 (885)
Q Consensus 417 G~i~i~D~-lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~---------~~~~------------- 473 (885)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+++|+...... .+.+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33334444 889999999999999999999999999999999999999641110 0000
Q ss_pred --------------cCcc-----------c-------------------------ccccCcchHHHHH---Hh-----cC
Q 002743 474 --------------LGQD-----------K-------------------------DASIAALPVDELI---EK-----AD 495 (885)
Q Consensus 474 --------------~~~~-----------~-------------------------~~~~~~~~~~~~~---~~-----~~ 495 (885)
...+ . ......+.+.+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0 0000011112211 11 11
Q ss_pred eE-------EeeCh--hcHHHHHHHHhhc-CC---EEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcc
Q 002743 496 GF-------AGVFP--EHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 562 (885)
Q Consensus 496 v~-------ar~sP--~~K~~iV~~lq~~-g~---~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~ 562 (885)
.+ ..+.| .+|..-++.+.+. |. .|+++||+.||.+||+.|+.||||++|.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 3688888888763 44 499999999999999999999999999999999999888888889
Q ss_pred hHHHHHHH
Q 002743 563 VIISAVLT 570 (885)
Q Consensus 563 ~i~~~i~~ 570 (885)
++..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99888854
No 47
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.78 E-value=1.4e-08 Score=90.50 Aligned_cols=65 Identities=31% Similarity=0.448 Sum_probs=54.6
Q ss_pred CCChHHHHHHHhcCC------hHHHhcCCceEEeecCCCCCccEEEEEEcCCCcEEEEEcCcHHHHHHhccC
Q 002743 306 NQDAIDAAIVGMLAD------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 371 (885)
Q Consensus 306 ~~~~~~~al~~~~~~------~~~~~~~~~~l~~~pf~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 371 (885)
.++|.|.|++.++.. ....+..+++++.+||||.+|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 468999999987642 3567788999999999999999999998 3345677999999999999974
No 48
>PRK10976 putative hydrolase; Provisional
Probab=98.73 E-value=7e-08 Score=104.19 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=54.2
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccC--EEEcCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aAD--ivl~~~~~~~i~~~i~ 569 (885)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|.+.+|+.|| .|+.+++-.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666543 2 4589999999999999999999999999999999988 6777777777777774
No 49
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.72 E-value=4.4e-08 Score=97.62 Aligned_cols=102 Identities=19% Similarity=0.248 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee--ChhcHHHH
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 508 (885)
Q Consensus 431 ~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~~K~~i 508 (885)
.+|+.|++.|+++.++|+.....+....+.+|+... |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 589999999999999999999999999999998521 1111 23333444
Q ss_pred HHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcc
Q 002743 509 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 562 (885)
Q Consensus 509 V~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~ 562 (885)
++.++-....|+|+||+.||.+|++.|++++||+++.+.++..||+|...++-.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCC
Confidence 444443345799999999999999999999999999999999999998755433
No 50
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.71 E-value=1e-07 Score=100.03 Aligned_cols=145 Identities=22% Similarity=0.296 Sum_probs=100.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC-C-ccc-cCc------------------------
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-S-SSL-LGQ------------------------ 476 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~-~-~~~-~~~------------------------ 476 (885)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+....+. + ..+ ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996432110 0 000 000
Q ss_pred --c-c------c----c---ccCcchHHHHHHhcC---------eEEeeCh--hcHHHHHHHHhhc-C---CEEEEEcCC
Q 002743 477 --D-K------D----A---SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 525 (885)
Q Consensus 477 --~-~------~----~---~~~~~~~~~~~~~~~---------v~ar~sP--~~K~~iV~~lq~~-g---~~V~miGDG 525 (885)
. . . . ..+.+.+.++.+... .+..+.| .+|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 0 0 000111222222211 1223334 3788888887654 3 569999999
Q ss_pred cCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcch----HHHHH
Q 002743 526 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAV 568 (885)
Q Consensus 526 ~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~----i~~~i 568 (885)
.||.+|++.|++|+||+++.+.+|+.||+|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999988777777 55554
No 51
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.66 E-value=6.4e-08 Score=95.43 Aligned_cols=97 Identities=28% Similarity=0.403 Sum_probs=79.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHH
Q 002743 432 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 511 (885)
Q Consensus 432 aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~ 511 (885)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 512 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 512 lq~----~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
+.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 433 3457999999999999999999999999888899999999998664
No 52
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.64 E-value=1.2e-07 Score=98.24 Aligned_cols=118 Identities=19% Similarity=0.169 Sum_probs=85.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe-eC
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~s 501 (885)
.+++|++.+.++.++++|.+|+++||-...-+..+++++|++....+.-....+ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 688999999999999999999999999999999999999997532211111000 0000 12322 34
Q ss_pred hhcHHHHHHHHhhc-CC---EEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEE
Q 002743 502 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555 (885)
Q Consensus 502 P~~K~~iV~~lq~~-g~---~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADiv 555 (885)
.+.|.+.++.+.+. |. .+.++|||.||.|||+.|+.+|++.......+ .|+..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~-~a~~~ 198 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA-LADVR 198 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH-HHHHh
Confidence 47899888666653 54 48999999999999999999999975443333 44433
No 53
>PLN02887 hydrolase family protein
Probab=98.62 E-value=2.3e-07 Score=109.21 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.7
Q ss_pred EEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 518 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 518 ~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.|+++|||.||.+||+.|+.||||++|.+.+|++||+|..+++-.++..+++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999998888888888774
No 54
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.62 E-value=1.4e-07 Score=100.06 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=101.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCcccc---------------------------
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 474 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~~~~--------------------------- 474 (885)
..+.+.+.++|++++++|+++.+.||.....+..+.+++++..... .+..+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4577999999999999999999999999999999999999862111 000000
Q ss_pred ---------------Ccc--cc------------------------------cccCcchHHHHH-------Hhc------
Q 002743 475 ---------------GQD--KD------------------------------ASIAALPVDELI-------EKA------ 494 (885)
Q Consensus 475 ---------------~~~--~~------------------------------~~~~~~~~~~~~-------~~~------ 494 (885)
... .. ...+.+.++++. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 00 000111111111 110
Q ss_pred -CeEEeeCh--hcHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 495 -DGFAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 495 -~v~ar~sP--~~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
.-+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..+..||++....+-.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 11223444 4798888888753 3578999999999999999999999999999999999999988776777665
Q ss_pred H
Q 002743 568 V 568 (885)
Q Consensus 568 i 568 (885)
+
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 55
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.56 E-value=4.8e-07 Score=97.90 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=55.5
Q ss_pred cHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~ 569 (885)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+..++.||++..+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655443 3 45899999999999999999999999999999999999998888888888774
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.52 E-value=5.8e-07 Score=92.92 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+.... ........+. .... +....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~--~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CHSLEVDEDG--MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cceEEECCCC--eEEC------------ccccccc
Confidence 4689999999999999 999999999999999999999985311 1110000000 0000 0012378
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCE-EEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADi-vl~~~~~~~i~~~i 568 (885)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887554445555665 44 4455555443
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.50 E-value=6e-07 Score=96.36 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=54.9
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHH
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~ 567 (885)
+|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++.+.+++.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888877764 2469999999999999999999999999999999999999988777666543
No 58
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.49 E-value=3.7e-07 Score=92.73 Aligned_cols=98 Identities=27% Similarity=0.326 Sum_probs=78.9
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHH
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 510 (885)
Q Consensus 431 ~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~ 510 (885)
.+|+.|++.|+++.++||.....+..+++++|+... |. ..++|.+.++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999998521 11 1234555555
Q ss_pred HHhh-c---CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 511 RLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 511 ~lq~-~---g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.+.+ . ...|+|+||+.||.+|++.|+++++++++.+..+..||+++..++
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCC
Confidence 5433 2 346999999999999999999999998888888889999996433
No 59
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.45 E-value=1.8e-06 Score=92.70 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=53.2
Q ss_pred cHHHHHHHHhhc------CCEEEEEcCCcCChhhhhcCCeeEEeccch---HHHHhc--c-CEEEcCCCcchHHHHHHH
Q 002743 504 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~lq~~------g~~V~miGDG~NDa~aLk~AdvGIa~g~~t---d~a~~a--A-Divl~~~~~~~i~~~i~~ 570 (885)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|...++-.++.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 566666665543 456999999999999999999999999987 467875 4 588878888888887753
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.42 E-value=7.5e-07 Score=91.58 Aligned_cols=117 Identities=26% Similarity=0.363 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +.......... ... -+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~g--~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDEKG--FIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcCCC--eEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997431 11111100000 000 0122234567
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccC
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 553 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aAD 553 (885)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788887776553 34599999999999999999999999765555666665
No 61
>PRK08238 hypothetical protein; Validated
Probab=98.40 E-value=0.00012 Score=84.88 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
|++|++.+.++++++.|+++.++|+-....+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997221 111110 1135577
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 549 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~ 549 (885)
.|.+.++..... +-+.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 786655433222 225789999999999999999999985554433
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.36 E-value=2.6e-06 Score=88.85 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=87.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccC-cccccccCcchHHHHHHhcCeE--Ee
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QDKDASIAALPVDELIEKADGF--AG 499 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~--ar 499 (885)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.....+.+....+ ....... .....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~---------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW---------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC---------CCCCcccccc
Confidence 47899999999999999999999999999888888888754333222111111 1100000 000000 00
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHH--hccCEEEcCCCcchHHHHH
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~--~aADivl~~~~~~~i~~~i 568 (885)
-....|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 01347999999998888889999999999999999999877542111111 1122222 4577666655
No 63
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.35 E-value=3.2e-06 Score=91.61 Aligned_cols=67 Identities=21% Similarity=0.158 Sum_probs=52.1
Q ss_pred cHHHHHHHHhh-------cCCEEEEEcCCcCChhhhhcCCeeEEeccch-HH-----HHhccCEEEcCCCcchHHHHHHH
Q 002743 504 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~lq~-------~g~~V~miGDG~NDa~aLk~AdvGIa~g~~t-d~-----a~~aADivl~~~~~~~i~~~i~~ 570 (885)
+|..-++.|.+ ....|+++|||.||.+||+.|++||||+++. +. .+..+|++....+-.++.+++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 56666666654 3356999999999999999999999998544 21 34479999998888888888754
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.30 E-value=9.2e-07 Score=90.16 Aligned_cols=92 Identities=24% Similarity=0.295 Sum_probs=70.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh-c-
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 504 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~-~- 504 (885)
+++.+.|+.++++|++++++||+....+..+++.+|++........+.... +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211111110000 11235666665 5
Q ss_pred -HHHHHHHH------hhcCCEEEEEcCCcCChhhhh
Q 002743 505 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 533 (885)
Q Consensus 505 -K~~iV~~l------q~~g~~V~miGDG~NDa~aLk 533 (885)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.30 E-value=5.3e-06 Score=89.93 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=52.5
Q ss_pred cHHHHHHHHhh----cC-CEEEEEcCCcCChhhhhcCCeeEEeccchHHHH----hcc-CEEE--cCCCcchHHHHHH
Q 002743 504 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 569 (885)
Q Consensus 504 ~K~~iV~~lq~----~g-~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~----~aA-Divl--~~~~~~~i~~~i~ 569 (885)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666666654 24 789999999999999999999999999999988 666 6777 4555667777663
No 66
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.27 E-value=1.5e-06 Score=85.11 Aligned_cols=109 Identities=20% Similarity=0.206 Sum_probs=76.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhc
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 504 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 504 (885)
+-|++++.++.|++.|.+|.++||--...+..+|.++||+...+..+.+.-.... ...+-... -.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G-k~~gfd~~--------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG-KYLGFDTN--------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC-cccccccC--------CccccCCc
Confidence 4689999999999999999999999999999999999998633222222110000 00000000 00012347
Q ss_pred HHHHHHHHhhc--CCEEEEEcCCcCChhhhhcCCeeEEec
Q 002743 505 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 542 (885)
Q Consensus 505 K~~iV~~lq~~--g~~V~miGDG~NDa~aLk~AdvGIa~g 542 (885)
|.++++.+++. -..++|+|||.||.+|+..||.=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999985 457899999999999999977766664
No 67
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.18 E-value=4e-06 Score=79.65 Aligned_cols=98 Identities=27% Similarity=0.447 Sum_probs=81.9
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHH
Q 002743 431 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 510 (885)
Q Consensus 431 ~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~ 510 (885)
-.|+.+.++||++-++||.+...+..=++++||..- |-. -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------YQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------eec--hHhHHHHHH
Confidence 479999999999999999999999999999998521 111 256777666
Q ss_pred HHhhc----CCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCC
Q 002743 511 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 511 ~lq~~----g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~ 560 (885)
.|.++ -..|+++||..||.|+|++..+++|+.++.+-.++.||+|+...+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~G 143 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKG 143 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccC
Confidence 66543 356999999999999999999999999999999999999997654
No 68
>PLN02954 phosphoserine phosphatase
Probab=98.16 E-value=1.5e-05 Score=83.51 Aligned_cols=131 Identities=21% Similarity=0.283 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........+. ...+... .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccC------CCcc--cCC
Confidence 378999999999999999999999999999999999999963 2221100000000 0000000 0000 012
Q ss_pred hcHHHHHHHHhhc--CCEEEEEcCCcCChhhhhc--CCeeEEeccc--hHHHHhccCEEEcCCCcchHHH
Q 002743 503 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 503 ~~K~~iV~~lq~~--g~~V~miGDG~NDa~aLk~--AdvGIa~g~~--td~a~~aADivl~~~~~~~i~~ 566 (885)
..|.+.++.+.++ ...+.|+||+.||..|.++ ++++++.+.. .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 4577888777654 3568999999999999877 5666666532 2334556899984 4555543
No 69
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.09 E-value=1.2e-05 Score=81.68 Aligned_cols=113 Identities=16% Similarity=0.074 Sum_probs=75.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchH-HHHHHhcCeEEe-e
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV-DELIEKADGFAG-V 500 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ar-~ 500 (885)
-+++|++.+.++.|++.|+++.++|+........+.+..|+.... ..++ +.+... ++... .-...++..+.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999999885321 0111 111000 00000 000000000111 1
Q ss_pred ChhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 501 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 501 sP~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999987 8899999999999999999987543
No 70
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.01 E-value=2.2e-05 Score=82.16 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC-CCc-cccCcccccccCcchHHHHHHhcCe--EEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLGQDKDASIAALPVDELIEKADG--FAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~v--~ar 499 (885)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +....+ .+. .+.+......- ..... +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k---------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW---------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec---------cCCccccccc
Confidence 68999999999999999999999999999999999887 643111 000 11111000000 00000 000
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHH--HhccCEEEcCCCcchHHHHH
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA--RSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a--~~aADivl~~~~~~~i~~~i 568 (885)
.....|..+++.++.....|.|+|||.||.+|.++||+.++-+.-.+.+ +..+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0013488899998877778999999999999999999977733211222 22233333 4566666554
No 71
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.97 E-value=1.4e-05 Score=80.42 Aligned_cols=101 Identities=22% Similarity=0.273 Sum_probs=70.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+.. .+........ +....+.. ..-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~--~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDD--NGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECC--CCEEeCcc--------CCcccCCcc
Confidence 368999999999999999999999999999999999999853 1111100000 00000000 000124467
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcC
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKA 535 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~A 535 (885)
.|.+.++.++++ ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999875
No 72
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.88 E-value=6e-05 Score=78.99 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=88.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC-
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s- 501 (885)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ...+...+ +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 468899999999999999999999999999999999999985321 11111000 11112
Q ss_pred -hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe-eEEecc----chHHHHhccCEEEcCCCcchHHHHHHH
Q 002743 502 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 502 -P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv-GIa~g~----~td~a~~aADivl~~~~~~~i~~~i~~ 570 (885)
|+--..+.+.++.....+.|+||+.||+.|.++|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 222244555555556679999999999999999999 666642 2344455788888 668888777654
No 73
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.87 E-value=3.5e-05 Score=79.39 Aligned_cols=109 Identities=16% Similarity=0.089 Sum_probs=77.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..- .........+ ...+++.. --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g~~~---------~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTGNID---------GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeCCcc---------CCCCC
Confidence 356899999999999999999999999999999999999998532 1111110000 00000000 01134
Q ss_pred hhcHHHHHHHHhh-cC---CEEEEEcCCcCChhhhhcCCeeEEec
Q 002743 502 PEHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVA 542 (885)
Q Consensus 502 P~~K~~iV~~lq~-~g---~~V~miGDG~NDa~aLk~AdvGIa~g 542 (885)
++.|.+.++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5788888877654 33 26889999999999999999999886
No 74
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.80 E-value=0.00012 Score=78.10 Aligned_cols=147 Identities=16% Similarity=0.151 Sum_probs=96.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--C-CCcc-c-cCc---------------------
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-PSSS-L-LGQ--------------------- 476 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~--~-~~~~-~-~~~--------------------- 476 (885)
.+..|...++++++++.|+.++..||......+.+.+++++.... + .+.. + ..+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999999875431 1 0000 0 000
Q ss_pred -------------c-ccc-------ccCcch----H---HHHHHhc--Ce---EE-----eeCh--hcHHHHHHHHhhc-
Q 002743 477 -------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER- 515 (885)
Q Consensus 477 -------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~a-----r~sP--~~K~~iV~~lq~~- 515 (885)
. ... ....+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000 000001 1 1112111 11 11 3444 4788888888764
Q ss_pred ---CCEEEEEcCCcCChhhhhc-CCeeEEeccchHHHHhccC-------EEEcCCCcchHHHHHH
Q 002743 516 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 569 (885)
Q Consensus 516 ---g~~V~miGDG~NDa~aLk~-AdvGIa~g~~td~a~~aAD-------ivl~~~~~~~i~~~i~ 569 (885)
...|.++||+.||.+|++. ++.|++|+++.+..++.++ ++.....-.++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 7799999999988886543 5555555667777664
No 75
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.76 E-value=0.00011 Score=76.98 Aligned_cols=126 Identities=18% Similarity=0.199 Sum_probs=91.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..... .+.+.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 45678999999999999999999999999999999999999965321 11110000 011224
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCC---eeEEecc--chHHHHhccCEEEcCCCcchHHHHH
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Ad---vGIa~g~--~td~a~~aADivl~~~~~~~i~~~i 568 (885)
|+......+.+....+.++||||..||+.|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55666666666655457999999999999999998 5666663 4566777799999 5566666554
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.74 E-value=5.7e-05 Score=71.52 Aligned_cols=118 Identities=15% Similarity=0.055 Sum_probs=76.3
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 420 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 420 ~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+......... .............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYY-PKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhc-ccccccccccccccCC
Confidence 34568999999999999999999999999999999999999987321 01111000000000 0000000011112334
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhc-CCeeEE
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 540 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~-AdvGIa 540 (885)
-.|+.+..+.+.+......+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666667777776666789999999999999998 555554
No 77
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.67 E-value=0.00016 Score=74.86 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+++++|++.|+++.++||.....+...-+.+|+.... ...+...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888889885321 011100000 01112233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-Ee--c--cchHHHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--A--DATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~--g--~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
-=..+++.++-....++|+||+.+|..+-++|++.. ++ | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 233444445444567999999999999999999863 33 3 22344567899998 4555555543
No 78
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.61 E-value=0.00022 Score=75.02 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
.+..-+++.++|++|++.|+++++.||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455567999999999999999999999999999999999984
No 79
>PLN02382 probable sucrose-phosphatase
Probab=97.57 E-value=0.00054 Score=78.46 Aligned_cols=141 Identities=18% Similarity=0.154 Sum_probs=89.6
Q ss_pred chHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC---CCc--c-----c-----------------------
Q 002743 428 DSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---PSS--S-----L----------------------- 473 (885)
Q Consensus 428 ~~~~aI-~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~---~~~--~-----~----------------------- 473 (885)
...+++ +++++.|+..+..||..+.....+.++.++..+.+ .+. + +
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 345555 88999999999999999999999999998765411 000 0 0
Q ss_pred c---C----ccccc-------ccCcch-------HHHHHHh----cC------eEEeeChh--cHHHHHHHHhhc----C
Q 002743 474 L---G----QDKDA-------SIAALP-------VDELIEK----AD------GFAGVFPE--HKYEIVKRLQER----K 516 (885)
Q Consensus 474 ~---~----~~~~~-------~~~~~~-------~~~~~~~----~~------v~ar~sP~--~K~~iV~~lq~~----g 516 (885)
. . .+... ..+.+. +.+.+.+ +. -+-.+.|. .|..-++.|.++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 0 00000 000101 1111111 11 12345554 498888888664 2
Q ss_pred ---CEEEEEcCCcCChhhhhcCC-eeEEeccchHHHHhcc--------CEEEc-CCCcchHHHHH
Q 002743 517 ---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVIISAV 568 (885)
Q Consensus 517 ---~~V~miGDG~NDa~aLk~Ad-vGIa~g~~td~a~~aA--------Divl~-~~~~~~i~~~i 568 (885)
..|.++||+.||.+||+.|+ .||+|+++.+..++.+ +++.. +++-.+|.+++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al 256 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAI 256 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHH
Confidence 47899999999999999999 6999999999888643 55544 33455666655
No 80
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.48 E-value=0.00073 Score=72.90 Aligned_cols=139 Identities=12% Similarity=0.115 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCC--C-C---CC--CCc----ccc----------------
Q 002743 424 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 474 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~-aGI~v~mlTGD~~~tA~~ia~~lGi~--~-~---~~--~~~----~~~---------------- 474 (885)
.+-+++.++|++|++ .|+.+.++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999988888766642 1 0 00 000 000
Q ss_pred ---Cccccc----------ccC--cchHHHHH----HhcC--------eEEeeChh--cHHHHHHHHhhc----CCEEEE
Q 002743 475 ---GQDKDA----------SIA--ALPVDELI----EKAD--------GFAGVFPE--HKYEIVKRLQER----KHICGM 521 (885)
Q Consensus 475 ---~~~~~~----------~~~--~~~~~~~~----~~~~--------v~ar~sP~--~K~~iV~~lq~~----g~~V~m 521 (885)
+...+. ..+ .+.+.++. +... .+-.+.|. +|..-++.+.+. ...+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 000 11111111 1111 22344443 788888776654 357899
Q ss_pred EcCCcCChhhhhcC----CeeEEeccchHHHHhccCEEEcCCCcchHHHHH
Q 002743 522 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 522 iGDG~NDa~aLk~A----dvGIa~g~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
+||+.||.+|++.+ +.||+||++. ..|++.|.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999765 457788854 44444333
No 81
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.45 E-value=0.00014 Score=77.12 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=57.0
Q ss_pred hcHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccC----EEEcCCCcchHHHHHHH
Q 002743 503 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 570 (885)
Q Consensus 503 ~~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aAD----ivl~~~~~~~i~~~i~~ 570 (885)
..|...++.+.++ | ..|+++||+.||.+|++.++.||+|+++.+..++.|| +|...++-.++.+++.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3788888888664 3 3588999999999999999999999999999999999 77766666778877743
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.39 E-value=0.00062 Score=73.75 Aligned_cols=125 Identities=15% Similarity=0.138 Sum_probs=80.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++.|++.++++.|++.|+++.++||-....+..+.++.|+.... ...+.+.+.. ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478899999999999999999999999988888888888874321 0111000000 001111
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe-eEEecc----chHHHHhccCEEEcCCCcchHHHHH
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv-GIa~g~----~td~a~~aADivl~~~~~~~i~~~i 568 (885)
+-=..+.+.+.-....|.|+||+.||..|.++|++ .+++.. ..+.....+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11123333333334679999999999999999997 355532 2233455799998 4566665443
No 83
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.34 E-value=0.00068 Score=70.55 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...+...+.. ...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999999999999999985321 1111100000 0111233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-Ee--cc-c-hHHHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--AD-A-TDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~--g~-~-td~a~~aADivl~~~~~~~i~~~i 568 (885)
--.++.+.++-....++|+||+.+|..|-++|++-. ++ +. . .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 333444444444567899999999999999999842 33 31 1 223445688887 4577766544
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.33 E-value=0.0014 Score=68.51 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
+.+.++|++++++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
No 85
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.26 E-value=0.00068 Score=70.31 Aligned_cols=119 Identities=16% Similarity=0.156 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
++.||+.++++.|++.|+++.++|+-....+..+.++.|+.... ...+ +.+. ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~-~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLI-GGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEE-ecCC------------------CCCCCCC
Confidence 57899999999999999999999999999999999999985321 1111 1100 001112
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE-e--ccc--hHHHHhccCEEEcCCCcchHH
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa-~--g~~--td~a~~aADivl~~~~~~~i~ 565 (885)
+-=....+.+.-....++|+||..||..|.++|++-.. + |.+ .......+|+++ +++..+.
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 21123333333334569999999999999999998744 4 222 123334688887 4455444
No 86
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.07 E-value=0.0015 Score=68.39 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=76.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
-+|.||+.++++.|++.|+++.++|+........+.+++|+.... ...+.+.+. ....-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 367899999999999999999999999999999999999985432 111111000 0011122
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe-ccc---hHHHHhccCEEEcCCCcchHH
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~-g~~---td~a~~aADivl~~~~~~~i~ 565 (885)
+-=..+.+.+.-....|+|+||..||+.+-++|++.... ..+ .+.-...+|+++ .++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 211122222222235689999999999999999987543 322 222233577777 3454443
No 87
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.06 E-value=0.0041 Score=66.65 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=38.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~ 465 (885)
..-+.+.++|++|++.||.+++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
No 88
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.03 E-value=0.0061 Score=65.38 Aligned_cols=132 Identities=11% Similarity=0.077 Sum_probs=84.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe---
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 499 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 499 (885)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... .+.........+ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCC-----------CeEeCCCC
Confidence 4679999999999999999999999999999999999999853211 110000000000 00111
Q ss_pred --eChhcHHHHHHH-----Hh--hcCCEEEEEcCCcCChhhhhcC---CeeEEec--c-c----hHHHHhccCEEEcCCC
Q 002743 500 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPG 560 (885)
Q Consensus 500 --~sP~~K~~iV~~-----lq--~~g~~V~miGDG~NDa~aLk~A---dvGIa~g--~-~----td~a~~aADivl~~~~ 560 (885)
+....|.+.+.. ++ .....|.|+|||.||++|..-. +--+.+| + - -+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011346654432 22 2235688999999999996544 2223333 2 1 2334678899999998
Q ss_pred cchHHHHH
Q 002743 561 LSVIISAV 568 (885)
Q Consensus 561 ~~~i~~~i 568 (885)
--.++.+|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 77777666
No 89
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.03 E-value=0.0021 Score=67.05 Aligned_cols=124 Identities=17% Similarity=0.166 Sum_probs=79.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
.++.||+.+.++.|++.|+++.++||-....+..+-+.+|+.. +.. ...+...+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 4789999999999999999999999999999999999999862 111 1111111100 01111
Q ss_pred hhcHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCeeE--Eeccch----HHHHhccCEEEcCCCcchHHH
Q 002743 502 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 502 P~~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvGI--a~g~~t----d~a~~aADivl~~~~~~~i~~ 566 (885)
|+-=....+.+.-. ...+.|+||+.+|+.+-++|++.. ++..|. ......+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22112223333322 357999999999999999999986 343221 12234578777 44555443
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.97 E-value=0.0024 Score=67.26 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888875321 111111000 01112233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccc----h-HHHHhccCEEEcCCCcchHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA----T-DAARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~----t-d~a~~aADivl~~~~~~~i~~~ 567 (885)
-=..+.+.+.-....+.|+||+.||..|-++|++- |++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 33445555555566799999999999999999987 344321 1 12334689988 445555443
No 91
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.93 E-value=0.0038 Score=66.77 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+..... ..++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467999999999999999999999999999999889888854311 1111111100 1111222
Q ss_pred cHHHHHHHHhhc-CCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~-g~~V~miGDG~NDa~aLk~AdvG 538 (885)
-=....+.+.-. .+.+.|+||..+|..|=++|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 222333333321 34599999999999999999975
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.88 E-value=0.0049 Score=73.18 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.3
Q ss_pred EeeccCCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 417 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 417 G~i~i~D~-lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3357899999999999999999999999999999999974
No 93
>PRK11590 hypothetical protein; Provisional
Probab=96.87 E-value=0.0041 Score=64.66 Aligned_cols=108 Identities=13% Similarity=0.041 Sum_probs=74.3
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI-~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+-+.+...++. . .-..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0011111111000000 0 0123556
Q ss_pred hcHHHHHHHH-hhcCCEEEEEcCCcCChhhhhcCCeeEEeccc
Q 002743 503 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 544 (885)
Q Consensus 503 ~~K~~iV~~l-q~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~ 544 (885)
++|.+-++.. .......-+=||..||.|||+.|+-.++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8888877654 33344566889999999999999999999743
No 94
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.79 E-value=0.0078 Score=65.14 Aligned_cols=121 Identities=13% Similarity=0.075 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... . .++.+.+ +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCC------------------CC--CCHH
Confidence 56799999999999999999999999999999999999985421 0 1111100 00 0111
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE-eccc--hH--HHHhccCEEEcCCCcchHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TD--AARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa-~g~~--td--~a~~aADivl~~~~~~~i~~~i 568 (885)
-=..+++.++-....++|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1112222232234569999999999999999998633 3222 22 3344689998 5577776654
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.78 E-value=0.0041 Score=64.60 Aligned_cols=107 Identities=12% Similarity=0.034 Sum_probs=73.4
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~-~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++|++.++|+ .+++.|++++++|+=....+..+++..|+... .. +.+-+.+.. ++.. + .=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~-~i~t~le~~-~gg~----~----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LN-LIASQIERG-NGGW----V----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---Cc-EEEEEeEEe-CCce----E----cCccCCC
Confidence 46899999996 78889999999999999999999998655221 01 111111100 0000 0 0123556
Q ss_pred hcHHHHHHHH-hhcCCEEEEEcCCcCChhhhhcCCeeEEecc
Q 002743 503 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 543 (885)
Q Consensus 503 ~~K~~iV~~l-q~~g~~V~miGDG~NDa~aLk~AdvGIa~g~ 543 (885)
++|.+-++.. ......+-+=||..||.|||+.||-.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888877654 3233455688999999999999999999963
No 96
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.77 E-value=0.0069 Score=65.41 Aligned_cols=94 Identities=15% Similarity=0.041 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..... ..++...+ .....|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~-------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDD-------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCc-------------------CCCCCC-
Confidence 567999999999999999999999999888877777777643211 11111110 001112
Q ss_pred cHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~AdvG 538 (885)
+..-+.+.+++. ...+.|+||+.+|+.|-++|++-
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 112233334433 25699999999999999999973
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.69 E-value=0.0068 Score=65.13 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999999999985321 1122111100 0111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEe-ccchHHHHhccCEEEcCCCcchH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV-ADATDAARSASDIVLTEPGLSVI 564 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~-g~~td~a~~aADivl~~~~~~~i 564 (885)
-=....+.+.-....++|+||..+|+.|-++|++- |++ +.........+|+++. +++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 22333444444456699999999999999999985 344 3222223335788873 34443
No 98
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.66 E-value=0.0048 Score=63.60 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 462 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lG 462 (885)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999888754
No 99
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.64 E-value=0.0021 Score=65.95 Aligned_cols=94 Identities=18% Similarity=0.096 Sum_probs=67.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
.+++.++++++++.|++.|+++.++||-....+..+-+++|+.... ...+...+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557778899999999999999999999999999999999985321 11111100 111334
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcC
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 535 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~A 535 (885)
|+--..+.+.+.-....|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5444555566655566799999999999887654
No 100
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.59 E-value=0.022 Score=70.53 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=46.1
Q ss_pred hcHHHHHHHHhhc--CCEEEEEcCCcCChhhhhcC---CeeEEeccchHHHHhccCEEEcCCCcchHHHHH
Q 002743 503 EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 503 ~~K~~iV~~lq~~--g~~V~miGDG~NDa~aLk~A---dvGIa~g~~td~a~~aADivl~~~~~~~i~~~i 568 (885)
-+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +.+|++.|.++ ..+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHH
Confidence 4799999888874 35799999999999999996 588888874 46888999654 4444443
No 101
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.46 E-value=0.0075 Score=70.50 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 67899999999999999999999999999999999999985421 1111111100 011232
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEecc--chHHHHhccCEEEcCCCcchHHHHHHH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 570 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~--~td~a~~aADivl~~~~~~~i~~~i~~ 570 (885)
-=....+.++ ...+.|+||..+|+.|-++|++- |++.. +.+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222222 34699999999999999999984 55532 2222234589888 557777666543
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.36 E-value=0.017 Score=61.65 Aligned_cols=117 Identities=12% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|++.|+++.++|+-....+...-+++|+.... ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 56789999999999999999999999999999999999985421 1112111100 1112233
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-Eeccc---hHHHHhccCEEEcCC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA---TDAARSASDIVLTEP 559 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~g~~---td~a~~aADivl~~~ 559 (885)
-=....+.++-....+.|+||..+|..|=++|++-. ++..+ .+.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 334444555444567999999999999999998853 33322 122234688888543
No 103
>PRK11587 putative phosphatase; Provisional
Probab=96.33 E-value=0.015 Score=60.78 Aligned_cols=115 Identities=13% Similarity=0.110 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+.....+...-+..|+... ...+...+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHh-----------------cCCCCCcH
Confidence 5789999999999999999999999887766666666776321 111111000 00111222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccch-HHHHhccCEEEcC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLTE 558 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~t-d~a~~aADivl~~ 558 (885)
-=....+.+.-....+.|+||..+|+.+-++|++- |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22333344433456799999999999999999984 6664332 2233457887743
No 104
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.31 E-value=0.006 Score=64.32 Aligned_cols=92 Identities=21% Similarity=0.231 Sum_probs=62.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
.|.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..+.+.+.. ..
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQ 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CC
Confidence 34556999999999999999999997 667999999999995311 111111110 00
Q ss_pred eChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEe
Q 002743 500 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 541 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~ 541 (885)
-.| +|. ..+++.| .+.|+||..||..+-++|++- |++
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 112 233 3445555 478999999999999998865 444
No 105
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.30 E-value=0.0092 Score=62.24 Aligned_cols=98 Identities=18% Similarity=0.185 Sum_probs=65.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
++.||+.++++.|++.|+++.++|+-....+...-+++|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998888788888888874321 11111110 011123
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCee-EEec
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVA 542 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~-NDa~aLk~AdvG-Ia~g 542 (885)
+-=..+.+.+.-....+.|+||.. +|+.+-++|++- |.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 211223333333345799999998 999999999874 5554
No 106
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.25 E-value=0.021 Score=60.85 Aligned_cols=68 Identities=24% Similarity=0.283 Sum_probs=45.8
Q ss_pred hcHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhcCCeeEEeccchHH-----HH---hccCEEE-cCCCcchHHHHHH
Q 002743 503 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA-----AR---SASDIVL-TEPGLSVIISAVL 569 (885)
Q Consensus 503 ~~K~~iV~~lq~~-g---~~V~miGDG~NDa~aLk~AdvGIa~g~~td~-----a~---~aADivl-~~~~~~~i~~~i~ 569 (885)
..|...|+.|+++ + +.|.++||+.||.+||..++-||.++++.+. .. ....+.. ..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999998875 2 3567799999999999999999999988776 22 2223333 3445556777664
Q ss_pred H
Q 002743 570 T 570 (885)
Q Consensus 570 ~ 570 (885)
|
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
No 107
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.22 E-value=0.009 Score=62.95 Aligned_cols=90 Identities=22% Similarity=0.273 Sum_probs=63.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD----~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
.|.|++.+.++.+++.|+++.++||. ...++..+.+..|++...+.... ++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi------------------------l~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI------------------------FAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE------------------------EcC
Confidence 46788999999999999999999995 35689999999999522111111 111
Q ss_pred eC--hhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEe
Q 002743 500 VF--PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 541 (885)
Q Consensus 500 ~s--P~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~ 541 (885)
-+ -.+|... +++.| .+.|+||..+|..+-++|++- |.+
T Consensus 170 d~~~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 11 1345543 34444 488999999999999999875 444
No 108
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.10 E-value=0.039 Score=55.91 Aligned_cols=141 Identities=19% Similarity=0.223 Sum_probs=92.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc-------cCcc---------cccccCcchHH
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL-------LGQD---------KDASIAALPVD 488 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~-------~~~~---------~~~~~~~~~~~ 488 (885)
+-||+.++.+.+++. ...+++|---..-+..+|..+|++........+ ...+ .....+++
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge--- 159 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE--- 159 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHH---
Confidence 458999999999876 456666667788899999999985422111111 0000 00011122
Q ss_pred HHHHhc-CeEEeeChhcHH---------------HHHHHHhhc---CCEEEEEcCCcCChhhhhcCC-e-eEEec-cchH
Q 002743 489 ELIEKA-DGFAGVFPEHKY---------------EIVKRLQER---KHICGMTGDGVNDAPALKKAD-I-GIAVA-DATD 546 (885)
Q Consensus 489 ~~~~~~-~v~ar~sP~~K~---------------~iV~~lq~~---g~~V~miGDG~NDa~aLk~Ad-v-GIa~g-~~td 546 (885)
++.++. .+|.|..|..-- ++++.+.+. ....+++||.+.|..||+.+. - |+|+. +|.+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 257888876544 444444332 345688999999999999875 2 48887 8888
Q ss_pred HHHhccCEEEcCCCcchHHHHHH
Q 002743 547 AARSASDIVLTEPGLSVIISAVL 569 (885)
Q Consensus 547 ~a~~aADivl~~~~~~~i~~~i~ 569 (885)
-|..-||+.+..++.......|.
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999998888777664
No 109
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.99 E-value=0.016 Score=63.57 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=76.0
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee
Q 002743 421 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 421 i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 500 (885)
..+++.|++.+++++|++.|+++.++||.....+..+.+.+|+....+. .+.+.+. ....+... .--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhcccC-CCCCC
Confidence 5689999999999999999999999999999999999999988531111 1111110 00000000 01234
Q ss_pred ChhcHHHHHHHHhh-cCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 501 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 501 sP~~K~~iV~~lq~-~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
.|+-|....+.+-. .-..++|+||..||+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777776543 3478999999999999999999873
No 110
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.96 E-value=0.016 Score=57.01 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
.++|+-++.++.+++.++.++++|+--.-....+-.+++=...++....+.... ..+....-.++-. .....--
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCC
Confidence 468999999999999999999999887666666655555111111111110000 0000000000000 0122335
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
+|...|+.|++..+.+.|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988777666554
No 111
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.88 E-value=0.019 Score=58.92 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=64.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+++++|++.|+++.++|+-+......+.+++|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 57899999999999999999999998888888888889974321 11111100 0011222
Q ss_pred c--HHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 504 H--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~--K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
. =..+.+.+.-....+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 1 1233334433446789999999999998888875
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.84 E-value=0.036 Score=56.01 Aligned_cols=127 Identities=20% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCCCCCccccCcccccccCcchHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~---------------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
++.||+.+++++|++.|+++.++|..... ....+-++.|+... ..+...... .++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----EDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----CCC--
Confidence 36799999999999999999999987521 11122233444100 000000000 000
Q ss_pred HHHHhcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-EeccchH---HHHhcc--CEEEcCCCcc
Q 002743 489 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 562 (885)
Q Consensus 489 ~~~~~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~g~~td---~a~~aA--Divl~~~~~~ 562 (885)
.....-.|+--....+.+.-..+.+.|+||..+|+.+-++|++.. ++..|.. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001112233333444445444567999999999999999999752 3333321 112234 7777 4466
Q ss_pred hHHHHH
Q 002743 563 VIISAV 568 (885)
Q Consensus 563 ~i~~~i 568 (885)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 665554
No 113
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.83 E-value=0.025 Score=61.71 Aligned_cols=117 Identities=19% Similarity=0.125 Sum_probs=70.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.+.++.|++.|+++.++|+-.......+-+..+.... ... ..+.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER-AQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc-cCceEEEecccc-----------------CCCCCCH
Confidence 5789999999999999999999999887766665554432110 000 01100000 0111122
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe-ccch--HHHHhccCEEEcC
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARSASDIVLTE 558 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~-g~~t--d~a~~aADivl~~ 558 (885)
+-=..+.+.+.-....++|+||+.+|+.|-++|++.... ..|. .-....+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 222334444444456799999999999999999987443 2321 1112358888843
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.74 E-value=0.029 Score=53.47 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=62.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 494 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~--------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (885)
-++.|++.++++.|+++|+++.++|+.. ........+++|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 67778888888874210 00000 0
Q ss_pred CeEEeeChhcHHHHHHHHh-hcCCEEEEEcC-CcCChhhhhcCCee
Q 002743 495 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADIG 538 (885)
Q Consensus 495 ~v~ar~sP~~K~~iV~~lq-~~g~~V~miGD-G~NDa~aLk~AdvG 538 (885)
+..-.|+-=..+.+.++ -....++|+|| -.+|..+-++|++=
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01111222233444442 34567999999 59999999888753
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.74 E-value=0.034 Score=62.56 Aligned_cols=120 Identities=18% Similarity=0.135 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985321 1111111100 0011222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE-EeccchHHH-HhccCEEEcCCCcchH
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATDAA-RSASDIVLTEPGLSVI 564 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI-a~g~~td~a-~~aADivl~~~~~~~i 564 (885)
-=....+.++-....++|+||..+|+.|-+.|++-. ++..+.+.. ...+|+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 223444555545677999999999999999999863 334333222 23588887 444443
No 116
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.57 E-value=0.016 Score=58.51 Aligned_cols=94 Identities=11% Similarity=0.023 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ...+.+.+. ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 45567778874321 111111000 01111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
-=....+.+.-....+.|+||..+|+.+-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11222333322334689999999999999999874
No 117
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.51 E-value=0.009 Score=59.10 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=67.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++.|++.+.+++|++.|++++++|+-.........+++|+... ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 46789999999999999999999999999999999999998621 11222111110 000111
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
+-=..+.+.++-....+.++||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222334444444456799999999999999988764
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.46 E-value=0.031 Score=58.24 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.+.+++|++. +++.++|+-....+..+-+++|+.... ..++...+. ....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5789999999999999 999999998888888888999985421 111111100 001232
Q ss_pred cH--HHHHHHH-hhcCCEEEEEcCCc-CChhhhhcCCe-eEEecc--chHHHHhccCEEEcCCCcchHH
Q 002743 504 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVII 565 (885)
Q Consensus 504 ~K--~~iV~~l-q~~g~~V~miGDG~-NDa~aLk~Adv-GIa~g~--~td~a~~aADivl~~~~~~~i~ 565 (885)
.. ....+.+ .-....+.|+||.. +|+.+=+++++ +|.+.. .+......+|.++ +++..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~ 221 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELY 221 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHH
Confidence 21 2333333 32345699999998 89999999997 344432 2212223466666 3454444
No 119
>PTZ00174 phosphomannomutase; Provisional
Probab=95.37 E-value=0.012 Score=62.70 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=49.1
Q ss_pred eeCh--hcHHHHHHHHhhcCCEEEEEcC----CcCChhhhhcC-CeeEEeccchHHHHhccCEEE
Q 002743 499 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 556 (885)
Q Consensus 499 r~sP--~~K~~iV~~lq~~g~~V~miGD----G~NDa~aLk~A-dvGIa~g~~td~a~~aADivl 556 (885)
.+.| -+|..-++.|.+....|+++|| |-||.+||+.| -.|++++++++..+..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4799999999888788999999 99999999987 788999999999998776554
No 120
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.30 E-value=0.03 Score=58.78 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=65.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+.... ..++.+.+ +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 67899999999999999999999998888888777778874311 11111110 001112
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee--EEecc
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 543 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG--Ia~g~ 543 (885)
+-=....+.+.-....++|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111222233333345699999999999999999995 45543
No 121
>PLN02580 trehalose-phosphatase
Probab=95.28 E-value=0.2 Score=56.37 Aligned_cols=68 Identities=25% Similarity=0.229 Sum_probs=48.4
Q ss_pred EEeeChh---cHHHHHHHHhhc-C-----C-EEEEEcCCcCChhhhhc-----CCeeEEeccchHHHHhccCEEEcCCCc
Q 002743 497 FAGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGL 561 (885)
Q Consensus 497 ~ar~sP~---~K~~iV~~lq~~-g-----~-~V~miGDG~NDa~aLk~-----AdvGIa~g~~td~a~~aADivl~~~~~ 561 (885)
+-++.|. +|...|+.+.+. | . .+.++||+.||..|++. +++||+|++|.+ ...|++.|.+ -
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~--~t~A~y~L~d--p 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK--ESNAFYSLRD--P 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC--CccceEEcCC--H
Confidence 3456664 898888887654 2 1 35899999999999996 689999987654 2367888844 4
Q ss_pred chHHHHH
Q 002743 562 SVIISAV 568 (885)
Q Consensus 562 ~~i~~~i 568 (885)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 5555444
No 122
>PRK06769 hypothetical protein; Validated
Probab=95.20 E-value=0.042 Score=55.20 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=58.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCe
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 496 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~--------tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 496 (885)
+.||+++++++|++.|+++.++|+.... .....-+..|+..-.. .....+.+. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC-----------------C
Confidence 6899999999999999999999987531 1222233445432100 000000000 0
Q ss_pred EEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 497 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 497 ~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
...-.|+-=..+.+.+.-..+.+.|+||..+|+.+=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11112222244445454444679999999999999999998643
No 123
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.19 E-value=0.046 Score=54.82 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ...+.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874311 111111000 01111222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 537 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv 537 (885)
-=..+.+.+.-....+.|+||...|+.+-+++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2233444444445679999999999999888876
No 124
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.11 E-value=0.11 Score=51.35 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=65.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCccccCcccccccCcchHHHHHHh
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~---~ia~~l---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
+|...|+++++++++++.|+++..+||.....+. ....++ | ++. ..+...+ +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-----g~li~~~------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-----GPVLLSP------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-----ceEEEcC------Ccchhh-hhc
Confidence 4778899999999999999999999999987774 444442 2 321 0110000 000000 000
Q ss_pred cCeEEeeChh-cHHHHHHHHhh-----cCCEEEEEcCCcCChhhhhcCCee
Q 002743 494 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 494 ~~v~ar~sP~-~K~~iV~~lq~-----~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
.+. .-.|+ .|.+.++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 111 12233 48888888876 356788899999999999877653
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.89 E-value=0.034 Score=56.13 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=59.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
-++.||+.++++.|++.|+++.++|+- ..+..+-++.|+.... ..++...+ ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCC
Confidence 368899999999999999999999986 5567777788874321 11110000 001122
Q ss_pred hcH--HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 503 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 503 ~~K--~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
... ..+.+.+.-....+.|+||..+|+.+-++|++-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211 122233322345688999999999999998874
No 126
>PRK09449 dUMP phosphatase; Provisional
Probab=94.76 E-value=0.077 Score=55.46 Aligned_cols=121 Identities=14% Similarity=0.128 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.|+ .|+++.++|+.....+...-++.|+.... ..++...+. ....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-------------------CCCCCC
Confidence 46899999999999 68999999998888888777788874311 111111000 001222
Q ss_pred --cHHHHHHHHhhc-CCEEEEEcCCc-CChhhhhcCCee-EEec-cchH-HHHhccCEEEcCCCcchHHHHH
Q 002743 504 --HKYEIVKRLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 504 --~K~~iV~~lq~~-g~~V~miGDG~-NDa~aLk~AdvG-Ia~g-~~td-~a~~aADivl~~~~~~~i~~~i 568 (885)
-=..+++.+.-. ...+.|+||.. +|+.+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112233333321 24699999998 799999999985 4444 2221 1112467777 4466655543
No 127
>PLN02940 riboflavin kinase
Probab=94.76 E-value=0.068 Score=60.80 Aligned_cols=114 Identities=20% Similarity=0.163 Sum_probs=70.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~-~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.... ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 467999999999999999999999998877766554 56763211 111110000 0111112
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccc--hHHHHhccCEEE
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVL 556 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~--td~a~~aADivl 556 (885)
+-=..+.+.+.-..+.|.|+||+.+|+.+-++|++. |++..+ .......+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222333344443456799999999999999999987 344432 222334566665
No 128
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.72 E-value=0.23 Score=48.47 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=76.6
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002743 382 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 461 (885)
Q Consensus 382 ~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l 461 (885)
..+.+.++|.+.+.+-..+ +++..=. ...-|++.+=+++++.+|+++.++|.-++.-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd~--~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWDN--PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceecccC--CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998775443 4443322 335578889999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee-ChhcHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhcCC
Q 002743 462 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-FPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 536 (885)
Q Consensus 462 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~-sP~~K~~iV~~lq~~---g~~V~miGDG~-NDa~aLk~Ad 536 (885)
|++- ..+. .|-- ..+-+++++. -..|+|+||-. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9852 1111 1222 2445555554 56799999986 5776655554
Q ss_pred e
Q 002743 537 I 537 (885)
Q Consensus 537 v 537 (885)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 4
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.46 E-value=0.11 Score=52.04 Aligned_cols=111 Identities=6% Similarity=-0.038 Sum_probs=70.1
Q ss_pred eeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHh
Q 002743 415 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 493 (885)
Q Consensus 415 llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD-~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (885)
......-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+..... -..+.+.++
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd- 99 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD- 99 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-
Confidence 44444455578999999999999999999999965 8888888888888741000 000001100
Q ss_pred cCeEEeeChhcH--HHHHHHHhhc------CCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 494 ADGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 494 ~~v~ar~sP~~K--~~iV~~lq~~------g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
..+.+.-.+..| .++.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 100 ~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 001111111112 2344544432 35799999999999999988876543
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.22 E-value=0.071 Score=51.97 Aligned_cols=97 Identities=20% Similarity=0.154 Sum_probs=58.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCcccccccCcchHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
++.||+.++++.|++.|+++.++|.... .....+.+++|+.....-.......+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~---------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADN---------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCC----------
Confidence 4789999999999999999999998652 345566677787421000000000000
Q ss_pred HHHHhcCeEEeeChhcH--HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 489 ELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 489 ~~~~~~~v~ar~sP~~K--~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
...+ .|+-+ ..+++.+.-..+.|.|+||...|+.+-+.+++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 22211 222233332345699999999999998888764
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.12 E-value=0.17 Score=50.88 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
No 132
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.83 E-value=0.058 Score=52.68 Aligned_cols=91 Identities=22% Similarity=0.243 Sum_probs=56.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
+..+|+.+.++.|++.|+++.++|+-....+...-+.. +... . ...+ +.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~-~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLIL-GSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEE-ecC-----------------CCCCCcCHH
Confidence 34579999999999999999999999988888777765 3221 1 1111 100 001111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 536 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Ad 536 (885)
-=..+.+.+.-.. .++|+||..+|+.|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 1122223333234 7999999999998877763
No 133
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.73 E-value=0.12 Score=53.16 Aligned_cols=94 Identities=15% Similarity=0.083 Sum_probs=57.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++...+. .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999975543 46666777774211 111100000 00011121
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCe
Q 002743 504 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI 537 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~-NDa~aLk~Adv 537 (885)
-=..+.+.+.-....++|+||+. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11222333333346799999997 89998888765
No 134
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.57 E-value=0.13 Score=51.45 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=59.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~-~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
..+-|++.+++++|++.|+++.++|+.+ ...+..+.+.+|+... +....
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3578999999999999999999999987 5677777788876310 00011
Q ss_pred hhcH--HHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCee
Q 002743 502 PEHK--YEIVKRLQERKHICGMTGDGV-NDAPALKKADIG 538 (885)
Q Consensus 502 P~~K--~~iV~~lq~~g~~V~miGDG~-NDa~aLk~AdvG 538 (885)
|... ..+.+.+.-....++|+||.. .|..+=++|++-
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2111 122222222345699999998 799999999874
No 135
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.39 E-value=0.36 Score=50.73 Aligned_cols=101 Identities=19% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCC---CCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 424 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTN---MYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 424 ~lr~~~~~aI~~l--~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
|+.|+.++.++.+ ++.|+.+.++|--|..--..+-+.-|+... ++.+......+. .+.-.+.. ...|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G--~l~v~pyh-----~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG--RLRVRPYH-----SHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc--eEEEeCcc-----CCCCC
Confidence 6678999999999 568999999999888888888888888532 111111100000 00000000 02244
Q ss_pred eeCh-hcHHHHHHHHhhc----C---CEEEEEcCCcCChhh
Q 002743 499 GVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDAPA 531 (885)
Q Consensus 499 r~sP-~~K~~iV~~lq~~----g---~~V~miGDG~NDa~a 531 (885)
++.| -=|..+++.+++. | ..|.++|||.||--.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 5555 3799999998875 4 689999999999643
No 136
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.13 E-value=0.12 Score=50.52 Aligned_cols=93 Identities=16% Similarity=0.031 Sum_probs=63.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
-++|||+.+.++.|+ .++++.+.|.-....+..+-+.+|+.... ...++...+ +.+..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d-------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDE-------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcc-------------------ccccCC
Confidence 357999999999999 57999999999999999999999874311 111111111 011122
Q ss_pred hcHHHHHHHHh---hcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 503 EHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 503 ~~K~~iV~~lq---~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
. +.+.++ .....|.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 333333 345689999999999998877765554
No 137
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.88 E-value=0.13 Score=51.04 Aligned_cols=97 Identities=12% Similarity=0.058 Sum_probs=57.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 488 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (885)
++-|++.+++++|++.|+++.++|.-. ......+-+.+|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 334555666777641 0 011000000 00
Q ss_pred HHHHhcCeEEeeChhcHHHHHHHH-hh---cCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 489 ELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 489 ~~~~~~~v~ar~sP~~K~~iV~~l-q~---~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
.... ..|. .++++.+ ++ ....+.|+||+.+|+.+-++|++-..
T Consensus 98 ------~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------NCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 1122 2222222 22 23458999999999999999988643
No 138
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.83 E-value=0.55 Score=50.47 Aligned_cols=86 Identities=14% Similarity=0.097 Sum_probs=58.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~t---A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
..++-|++.+.++.+++.|+++.++|+..... ....-++.|++... ... ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d~-----------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EEH-----------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cce-----------------------EEe
Confidence 45678999999999999999999999976433 33445667875321 011 122
Q ss_pred eeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhh
Q 002743 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 532 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aL 532 (885)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2222345555566666556799999999998654
No 139
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.76 E-value=0.18 Score=53.63 Aligned_cols=66 Identities=21% Similarity=0.204 Sum_probs=47.1
Q ss_pred eeChhcHHHHHHHHhhc----CCEEEEEcCCcCChhhhhcC--------CeeEEeccchHHHHhccCEEEcCCCcchHHH
Q 002743 499 GVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIIS 566 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~----g~~V~miGDG~NDa~aLk~A--------dvGIa~g~~td~a~~aADivl~~~~~~~i~~ 566 (885)
+..+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 33456788877776654 34789999999999999999 4788885342 4567899884 4555544
Q ss_pred HH
Q 002743 567 AV 568 (885)
Q Consensus 567 ~i 568 (885)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
No 140
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.61 E-value=0.26 Score=55.08 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=57.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchH
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 487 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~ 487 (885)
-+|.|++.+++++|+++|+++.++|+= ....+..+.+..|+.. ...+.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----cc--
Confidence 367899999999999999999999982 1233455666666631 0111000000 00
Q ss_pred HHHHHhcCeEEeeChhcHHHHHHHHhh----cCCEEEEEcCCcCChhhhhcCCee
Q 002743 488 DELIEKADGFAGVFPEHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 488 ~~~~~~~~v~ar~sP~~K~~iV~~lq~----~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
...+| .| |-+++..+.+ ....+.|+||+.+|..+-+.|++-
T Consensus 99 -------~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 99 -------NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred -------cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 00011 22 2233333222 246799999999999998888775
No 141
>PLN02811 hydrolase
Probab=92.41 E-value=0.22 Score=52.02 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=57.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~-ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.+.|+.|++.|+++.++||-....... ..+..|+... . ...+.+.+.+ + ....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f-~~i~~~~~~~-------~--------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-M-HHVVTGDDPE-------V--------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-C-CEEEECChhh-------c--------cCCCCCc
Confidence 567999999999999999999999977543322 2222233210 0 0111110000 0 0001112
Q ss_pred hcHHHHHHHHh---hcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 503 EHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 503 ~~K~~iV~~lq---~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
+-=...++.+. -....|.|+||...|+.|-++|++-.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 21123334443 22467999999999999999999863
No 142
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.07 E-value=0.58 Score=60.22 Aligned_cols=125 Identities=15% Similarity=0.172 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh-
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 502 (885)
.+.||+.+.++.|+++|+++.++|+-....+...-++.|+..... ...+...+ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc-------------------cccCCCC
Confidence 357999999999999999999999998888888888888852111 11111110 111122
Q ss_pred -hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee-EEeccc---hHHHHhccCEEEcCCCcchHHHHH
Q 002743 503 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARSASDIVLTEPGLSVIISAV 568 (885)
Q Consensus 503 -~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG-Ia~g~~---td~a~~aADivl~~~~~~~i~~~i 568 (885)
+-=.+..+.+.-....+.|+||..+|+.|-++|++- |++..+ .+.....+|+++.+..-.++.+.+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 222333444444456799999999999999999984 455322 233445788888554333333333
No 143
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.96 E-value=0.73 Score=48.88 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=59.3
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 494 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~--~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (885)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+. ...++... ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~---------~~------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSG---------EI------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccH---------HH-------
Confidence 555666788999999999999999999999995554433 455778875311 11111100 00
Q ss_pred CeEEeeChhcHHHHHHHHhh---cCCEEEEEcCCcCChhhhhcCC
Q 002743 495 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 536 (885)
Q Consensus 495 ~v~ar~sP~~K~~iV~~lq~---~g~~V~miGDG~NDa~aLk~Ad 536 (885)
...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 ---------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 ---------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 01112222232 2467999999999998886443
No 144
>PLN03017 trehalose-phosphatase
Probab=91.88 E-value=3 Score=46.76 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=34.4
Q ss_pred eeeEeeccCC--CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 002743 414 QLVGLLPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 458 (885)
Q Consensus 414 ~llG~i~i~D--~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia 458 (885)
+|+-++.-.| .+-++..++|++|. .|+.+.++||..........
T Consensus 121 TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 121 TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 5554444333 47789999999999 78999999999999888773
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.73 E-value=0.81 Score=47.90 Aligned_cols=87 Identities=22% Similarity=0.260 Sum_probs=54.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~i---a~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
-|+-|++.+.++.+++.|++|+++||........+ -++.|++.. ..-.+.+.+ + .. .
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~-d-----~~------------~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLE-D-----SN------------K 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCC-C-----CC------------c
Confidence 47789999999999999999999999987542222 244566421 111111100 0 00 0
Q ss_pred eChhcHHHHHHHHhhcCC-EEEEEcCCcCCh
Q 002743 500 VFPEHKYEIVKRLQERKH-ICGMTGDGVNDA 529 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~~g~-~V~miGDG~NDa 529 (885)
-.-+-|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 001226677767777765 677899998885
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.51 E-value=0.56 Score=44.53 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 462 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD-~~~tA~~ia~~lG 462 (885)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
No 147
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.47 E-value=1.3 Score=45.21 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=32.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 428 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 428 ~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
.+...+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998877777888888885
No 148
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=91.44 E-value=0.93 Score=56.77 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=31.3
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCChHHHHHHHHH
Q 002743 424 PPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 424 ~lr~~~~~aI~~l-~~aGI~v~mlTGD~~~tA~~ia~~ 460 (885)
.|-++..+++++| ++.|+.|.++||....+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667999999997 778999999999999887776644
No 149
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.28 E-value=0.31 Score=50.93 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=63.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccCcccccccCcchHHHHHHhcCeEE
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lG---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
+-++.||+.+++++|+++|+++.++|.......+.+-+..+ +... + +..+. ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEEE-eCccc
Confidence 35789999999999999999999999988776666555442 2110 0 00000 00111
Q ss_pred eeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 499 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 499 r~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222344444444446799999999999999999986433
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.15 E-value=0.7 Score=46.06 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHhCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 464 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~------------tA~~ia~~lGi~ 464 (885)
+-||+.+++++|+++|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 4489999999999999999999964431 345667778873
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.83 E-value=0.27 Score=50.79 Aligned_cols=97 Identities=13% Similarity=0.034 Sum_probs=55.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~t--A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 500 (885)
-++.|++.+.++.|++.|+++.++|...... ........|+.... ..++...+. ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeeec-----------------CCCCC
Confidence 3678999999999999999999999865432 22222223332110 000000000 00111
Q ss_pred ChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 501 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 501 sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
.|+-=..+.+.+.-....++|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12211233333333345689999999999999999885
No 152
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.20 E-value=2.1 Score=43.77 Aligned_cols=111 Identities=16% Similarity=0.217 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCC---CCCCC-ccccCcccccccCcchHHHHHHhcCeEE
Q 002743 424 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMYPS-SSLLGQDKDASIAALPVDELIEKADGFA 498 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI-~v~mlTGD~~~tA~~ia~~lGi~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a 498 (885)
|.-|+..++|+.+++.|- .++++|--|.-.-..+-+..|+.. .++++ ..+.... .+.-.+.. .-.-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G---~L~v~pyH----~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASG---RLLVRPYH----TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCC---cEEeecCC----CCCccC
Confidence 567899999999999997 999999888777777777777632 00000 0000000 00000000 001233
Q ss_pred eeChh-cHHHHHHHHhhcC-------CEEEEEcCCcCCh-hhhhcCCeeEEe
Q 002743 499 GVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAV 541 (885)
Q Consensus 499 r~sP~-~K~~iV~~lq~~g-------~~V~miGDG~NDa-~aLk~AdvGIa~ 541 (885)
++-|. =|..++..++..+ ..+.++|||.||. |+++...--+||
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 33222 3667776666432 2788999999995 777766665666
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.98 E-value=0.92 Score=46.47 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=55.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia-~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
++.||+.++++.|++.|+++.++|.-........- +..++.... ...+...+ +..-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 112321100 00000000 000112
Q ss_pred --hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 503 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 503 --~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
+==..+.+.+.-....+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1112333444334466899999999999999988853
No 154
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.91 E-value=1.7 Score=43.35 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=72.9
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------ChHHHHH
Q 002743 386 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 456 (885)
Q Consensus 386 ~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~--v~mlTGD-------~~~tA~~ 456 (885)
+.+.|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788888764432 21 1234578889999999999999874 9999886 3788999
Q ss_pred HHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHHHHHHHHhhc-----CCEEEEEcCCc-CChh
Q 002743 457 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 530 (885)
Q Consensus 457 ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~~-----g~~V~miGDG~-NDa~ 530 (885)
+.+.+|++. + .+..-.|--..++.+.++.+ -+.++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12234576666788888755 56799999974 4554
Q ss_pred hhh
Q 002743 531 ALK 533 (885)
Q Consensus 531 aLk 533 (885)
+=.
T Consensus 152 ~gN 154 (168)
T PF09419_consen 152 MGN 154 (168)
T ss_pred Hhh
Confidence 433
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=87.30 E-value=0.82 Score=47.59 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=60.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++.| ++++.++|+.....+...-+..|+.... +...+.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999888777777778875321 11111111000 0011122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEE
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa 540 (885)
-=....+.+.-....|+|+||..+|+.+=++|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 1122333333333568999999999999999998764
No 156
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.62 E-value=1.2 Score=49.36 Aligned_cols=90 Identities=11% Similarity=0.068 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 499 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~----lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 499 (885)
++.+++.+++++|++.|+++.++|.-+...|..+-++ +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999988887 6653211 0111
Q ss_pred eChhcHHHHHHHHhh----cCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 500 VFPEHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 500 ~sP~~K~~iV~~lq~----~g~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
..++-|.+.++.+-+ .-..++|+||...|..+.+++..++.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 223345444443332 346799999999999999998888655
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=84.77 E-value=1.9 Score=47.68 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=39.0
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia---~~lGi~ 464 (885)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...+. +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977777776 456663
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=84.60 E-value=1.6 Score=44.49 Aligned_cols=97 Identities=11% Similarity=0.073 Sum_probs=55.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--CCCccccCcccccccCcchHHHHHHhcCeEEeeC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 501 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 501 (885)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+.... +-... +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccC
Confidence 46899999999999985 56667764444444344556653210 00011 111111
Q ss_pred hhcHHHHHH-HHhhcC-CEEEEEcCCcCChhhhhcC--CeeE-Eeccch
Q 002743 502 PEHKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGI-AVADAT 545 (885)
Q Consensus 502 P~~K~~iV~-~lq~~g-~~V~miGDG~NDa~aLk~A--dvGI-a~g~~t 545 (885)
+. |-++++ .+++.| ..++|+||..+|+.+-++| ++-. .+..|.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 11 223333 333333 4588999999999999999 8863 344443
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=83.96 E-value=0.99 Score=45.48 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.+++.+++++|+ .++.++|.-....+...-+++|+.... ..++...+.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999998 478999998888888888999984321 111111000000 000011222
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
-=..+++.+......++|+||...|+.+=++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344444544556789999999999988888764
No 160
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=82.62 E-value=1.8 Score=43.53 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=58.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcH
Q 002743 426 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 505 (885)
Q Consensus 426 r~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 505 (885)
-|+ .++++.|++. +++.++||.....+...-++.|+.... ..++...+.. ..+-.|+-=
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~ 148 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTF 148 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHH
Confidence 354 6899999875 899999999999999999999985321 1111111000 111122222
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhcCCee
Q 002743 506 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 506 ~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvG 538 (885)
....+.++-....|.|+||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333344443345688999999999999998875
No 161
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=82.15 E-value=1.2 Score=40.50 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.1
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia---~~lGi~ 464 (885)
|++.-.+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667888899999999999999999999998866655555 456764
No 162
>PLN02151 trehalose-phosphatase
Probab=77.86 E-value=34 Score=38.39 Aligned_cols=66 Identities=21% Similarity=0.225 Sum_probs=44.5
Q ss_pred eeChh---cHHHHHHHHhhc-C------CEEEEEcCCcCChhhhhcC-----CeeEEeccchHHHHhccCEEEcCCCcch
Q 002743 499 GVFPE---HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 499 r~sP~---~K~~iV~~lq~~-g------~~V~miGDG~NDa~aLk~A-----dvGIa~g~~td~a~~aADivl~~~~~~~ 563 (885)
++.|. +|-..|+.+.+. + ..+.++||...|-.|++.. ++||-++.+.. ...|++.|.+ -..
T Consensus 261 EvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~e 336 (354)
T PLN02151 261 EIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDE 336 (354)
T ss_pred EEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHH
Confidence 44553 788888887654 1 2589999999999998853 56777764321 3368888844 455
Q ss_pred HHHHH
Q 002743 564 IISAV 568 (885)
Q Consensus 564 i~~~i 568 (885)
+...+
T Consensus 337 V~~~L 341 (354)
T PLN02151 337 VMEFL 341 (354)
T ss_pred HHHHH
Confidence 55444
No 163
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=74.70 E-value=5.7 Score=41.78 Aligned_cols=89 Identities=21% Similarity=0.181 Sum_probs=54.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~---tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 500 (885)
++=|++.+.++.+++.|++|..+||.... ....--++.|.... ....+.+.... . ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----~------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----S------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----S------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----c------------ccc
Confidence 44578999999999999999999998754 22233355665321 01111000000 0 000
Q ss_pred ChhcHHHHHHHHhhcC-CEEEEEcCCcCChhh
Q 002743 501 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 531 (885)
Q Consensus 501 sP~~K~~iV~~lq~~g-~~V~miGDG~NDa~a 531 (885)
..+-|...-+.++++| ++++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1234888888888886 467789999999776
No 164
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=72.03 E-value=9.9 Score=44.77 Aligned_cols=98 Identities=16% Similarity=0.051 Sum_probs=61.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCC------CccccCcccccccCcchHHHHHHhcCeE
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYP------SSSLLGQDKDASIAALPVDELIEKADGF 497 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~-lGi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 497 (885)
+++++.+ .+++.|- ++++|+-....+..+|++ +|++.-... ...++|.-. +.
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~-----g~------------ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMK-----KP------------ 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeec-----CC------------
Confidence 5666555 4456775 499999999999999987 898531110 111111100 00
Q ss_pred EeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEecc
Q 002743 498 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 543 (885)
Q Consensus 498 ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~ 543 (885)
..+.=++|.+-++..........+-||..||.|+|+.||-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0123366887776433222223689999999999999999999975
No 165
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=71.98 E-value=21 Score=38.35 Aligned_cols=88 Identities=20% Similarity=0.236 Sum_probs=51.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeE
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 497 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~----tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 497 (885)
+.|+=|++.+..+.+++.|++|+.+||.... |..+. ++.|.... ..-.+.+.. + ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~--~~LiLR~~~-D-----~~----------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW--EKLILKDPQ-D-----NS----------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc--ceeeecCCC-C-----Cc-----------
Confidence 4567789999999999999999999999854 33333 23566421 001111000 0 00
Q ss_pred EeeChhcHHHHHHHHhhcCC-EEEEEcCCcCCh
Q 002743 498 AGVFPEHKYEIVKRLQERKH-ICGMTGDGVNDA 529 (885)
Q Consensus 498 ar~sP~~K~~iV~~lq~~g~-~V~miGDG~NDa 529 (885)
..-..+-|.+.=+.+.+.|+ +++.+||-.+|-
T Consensus 203 ~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 00011335444455556665 677899998885
No 166
>PLN02423 phosphomannomutase
Probab=71.14 E-value=5.9 Score=42.15 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=36.4
Q ss_pred hcHHHHHHHHhhcCCEEEEEcC----CcCChhhhhc-CCeeEEeccchH
Q 002743 503 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 546 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGD----G~NDa~aLk~-AdvGIa~g~~td 546 (885)
-+|..-++.|+ ....|+++|| |-||.+||+. -=.||.+.+=.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 7778999999 8999999997 778899864333
No 167
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=71.13 E-value=18 Score=35.58 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=66.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHh-----CCCCCCCCCccccCcccccccCcchHHHHHHhc
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 494 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~i---a~~l-----Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (885)
|..++++.+..+++++.|++++-+|+...--|..+ -.+. +++... + ..+...+-..+. -
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gp-----v-------~~sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGP-----V-------LLSPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCC-----E-------EECCcchhhhhh-c
Confidence 79999999999999999999999999986544332 2233 333211 1 001111111100 0
Q ss_pred CeEEeeChhcHHHHHHHHhhc-----CCEEEEEcCCcCChhhhhcCCee
Q 002743 495 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 538 (885)
Q Consensus 495 ~v~ar~sP~~K~~iV~~lq~~-----g~~V~miGDG~NDa~aLk~AdvG 538 (885)
++..+-.-+.|....+.++.. ....+..|...+|+.+-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 123343446799999998864 45778899999999999987654
No 168
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=70.91 E-value=8 Score=40.41 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=70.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeCh
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 502 (885)
.++.||+.+.++.|++.|+.+.+.|+-....+..+.+.+|+.... ...+.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 478899999999999999999999999998999999999985421 1111111100 112234
Q ss_pred hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeE
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 539 (885)
Q Consensus 503 ~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGI 539 (885)
+-=+.-.+.|.-....|..+.|..|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 4444555555445667999999999999999998764
No 169
>PRK10444 UMP phosphatase; Provisional
Probab=69.49 E-value=5.2 Score=42.68 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=39.8
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 461 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l 461 (885)
|.+.-.+.+-|++.++|+.|++.|++++.+||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666666788899999999999999999999999998888888775
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=69.03 E-value=7.8 Score=42.01 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.6
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002743 425 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 425 lr-~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~ 465 (885)
+| |++.+++++|+++|+++.+.|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999988888889999999964
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=67.52 E-value=6.9 Score=41.95 Aligned_cols=48 Identities=25% Similarity=0.387 Sum_probs=36.2
Q ss_pred EeeccCCC----CCcchHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHhCCC
Q 002743 417 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRLGMG 464 (885)
Q Consensus 417 G~i~i~D~----lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~---ia~~lGi~ 464 (885)
|.+.-.+. +=|++.++|++|++.|+++.++||....+... .-+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44545555 78899999999999999999999987665433 34456664
No 172
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=67.36 E-value=10 Score=38.56 Aligned_cols=47 Identities=23% Similarity=0.314 Sum_probs=41.5
Q ss_pred eeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002743 414 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 414 ~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~ 460 (885)
.+-|.+.++|..=|++.|+++.|++++.+|+.+|.-..+.-+.+.++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 46799999999999999999999999999999998887776666654
No 173
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=67.21 E-value=9.3 Score=41.48 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.5
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002743 425 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 425 lr-~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~ 465 (885)
+| |++.+++++|+++|+++.++|+-....+....+++|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 999999999999999999999777777888999999963
No 174
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=65.85 E-value=8.3 Score=40.69 Aligned_cols=90 Identities=12% Similarity=0.093 Sum_probs=52.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++-||+.++++.|++. +++.++|.-+... +..|+.... ..++...+ ..+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f--d~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF--EFVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh--ceeEeccc-------------------CCcCCCc
Confidence 4568999999999975 8999998865431 456663211 01110000 0111222
Q ss_pred cH--HHHHHHHhhcCCEEEEEcCC-cCChhhhhcCCeeEE
Q 002743 504 HK--YEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIA 540 (885)
Q Consensus 504 ~K--~~iV~~lq~~g~~V~miGDG-~NDa~aLk~AdvGIa 540 (885)
-. ....+.+.-....+.||||. ..|+.+=++|++-..
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 11 12223333334579999999 599999998887644
No 175
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=64.79 E-value=11 Score=40.16 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=38.1
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTG---D~~~tA~~ia~~lGi~ 464 (885)
|.+.-.+.+=|++.++|++|++.|+++.++|| ..........+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566678999999999999999999997 5566667777778874
No 176
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=64.02 E-value=7.9 Score=38.38 Aligned_cols=86 Identities=13% Similarity=0.026 Sum_probs=51.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChh
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 503 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 503 (885)
++.||+.++++ ++.++|.-+.......-+++|+.... ..++...+. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 57899999998 36788988888788888888874321 011111000 01111122
Q ss_pred cHHHHHHHHhhcCCEEEEEcCCcCChhhhhcC
Q 002743 504 HKYEIVKRLQERKHICGMTGDGVNDAPALKKA 535 (885)
Q Consensus 504 ~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~A 535 (885)
-=....+.+.-....|+||||...|+.+-+++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 11334444444456799999999998776553
No 177
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.69 E-value=18 Score=37.39 Aligned_cols=41 Identities=15% Similarity=0.211 Sum_probs=34.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~ 465 (885)
++-+++.++++++++. .++.++|--....+....+++||..
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 4567899999999988 9999999877777888889999743
No 178
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=61.93 E-value=21 Score=35.94 Aligned_cols=98 Identities=15% Similarity=0.192 Sum_probs=58.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc------CeEE
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA------DGFA 498 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~a 498 (885)
+.+++.+++..++++|.+++|+|-= -||....++...+... .+-+.+.++.. ..+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~-------~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKL-------HNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHH-------HHHHHHHHHHcCCccceEEEC
Confidence 4689999999999999999999952 3554432222211000 00011111111 1234
Q ss_pred eeChhc--------HHHHHHHHhhcC---CEEEEEcCCcCChhhhhcCCeeEEe
Q 002743 499 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV 541 (885)
Q Consensus 499 r~sP~~--------K~~iV~~lq~~g---~~V~miGDG~NDa~aLk~AdvGIa~ 541 (885)
--.|++ ...+.+.+++.+ ....||||-..|..+-..|+++ .+
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444443 344555555544 6788999999999998888887 54
No 179
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=60.01 E-value=7.2 Score=38.64 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=37.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~ 464 (885)
.=..||++.+.+++|.+. .++.+.|--....|..+.+.++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 335799999999999988 999999999999999999999864
No 180
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=59.14 E-value=6 Score=42.39 Aligned_cols=118 Identities=15% Similarity=0.154 Sum_probs=65.2
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc-----CeEEeeC
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA-----DGFAGVF 501 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~ar~s 501 (885)
++..++++.|++.|.++.+.|+.........+...|+. .+-+.+... ..+..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999886644332222222211 111111110 1122222
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCc-CChhhhhcCCee-EEeccch---H---HHHhccCEEEcCCCcchHHHH
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVADAT---D---AARSASDIVLTEPGLSVIISA 567 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~-NDa~aLk~AdvG-Ia~g~~t---d---~a~~aADivl~~~~~~~i~~~ 567 (885)
|+-=..+.+.+......++|+||.. +|+.+=+++++- |.+..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3222333444443457899999996 899998888875 4444331 1 1223467777 456655543
No 181
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=57.05 E-value=34 Score=38.30 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh-C
Q 002743 426 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G 462 (885)
Q Consensus 426 r~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l-G 462 (885)
-|++++.+++|+++|+++.++|+-....+..+-+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999998886 6
No 182
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=56.61 E-value=1.1e+02 Score=38.19 Aligned_cols=184 Identities=16% Similarity=0.090 Sum_probs=93.1
Q ss_pred HHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-eCCeEEEeccccCCCCcc
Q 002743 46 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKIDQSALTGESLPV 124 (885)
Q Consensus 46 ~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~~~Vdes~LTGEs~pv 124 (885)
..+.-++..++-+++.++..... -+.. -++-|....+...|.+|=|.++++ |+.+-+|=-.+.|+..-+
T Consensus 69 ~~i~~~qe~~a~~~~~~L~~~~~-----~~~~-----V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~V 138 (755)
T TIGR01647 69 ATIGFIEENKAGNAVEALKQSLA-----PKAR-----VLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQV 138 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCC-----CeEE-----EEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEE
Confidence 34444566666666665432211 1111 224588889999999999999995 444556666666664333
Q ss_pred ccC--CCCc----ccccceeeeCeEEEEEEEeccchhhhhHhh---hhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 002743 125 TKN--PYDE----VFSGSTCKQGEIEAVVIATGVHTFFGKAAH---LVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEI 195 (885)
Q Consensus 125 ~K~--~~~~----v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~---l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 195 (885)
.-+ .|+. -..|..+..|+...-=..++.-+..|.-.. +.+..++..+-...+.+....+...+....++..
T Consensus 139 DeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~ 218 (755)
T TIGR01647 139 DQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLV 218 (755)
T ss_pred EcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 322 1332 235666666764433223333333332111 1111122222111233333333333332233333
Q ss_pred HHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Q 002743 196 IIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 239 (885)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~ 239 (885)
++.+..+.......+...+...++..-.+.|.+++++...+...
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 219 LIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 33333221112234556677777888888999999999887653
No 183
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=56.56 E-value=29 Score=41.15 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=31.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHhCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 464 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~------------~tA~~ia~~lGi~ 464 (885)
+-|++++++++|++.|+++.++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997333 3456677777764
No 184
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=53.20 E-value=2e+02 Score=35.46 Aligned_cols=81 Identities=16% Similarity=0.100 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCc-EEEEcCCCeeeceEEEEee-
Q 002743 31 DFVGIIVLLVINSTISFIEENNAG-NAAAALMANLAPKTKVLRDGRWSEQDASILVPGD-VISIKLGDIVPADARLLEG- 107 (885)
Q Consensus 31 ~~~~i~~~~~~~~~i~~~~e~~a~-~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GD-iv~l~~Gd~VPaD~~ll~g- 107 (885)
+.+.+.++++++.+++.+.|..++ ++-+++.++..... +-.-.. ++-|. ...+...|.+|=|.++++.
T Consensus 64 ~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~v-----ir~g~~~~~V~~~eL~~GDiV~v~~G 134 (679)
T PRK01122 64 FNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFARK-----LREPGAAEEVPATELRKGDIVLVEAG 134 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEEE-----EECCCEEEEEEHHHcCCCCEEEEcCC
Confidence 345666788888888888776665 55566655433221 111222 23455 6788889999999999954
Q ss_pred CCeEEEeccccCC
Q 002743 108 DPLKIDQSALTGE 120 (885)
Q Consensus 108 ~~~~Vdes~LTGE 120 (885)
+.+-+|=-.+.|+
T Consensus 135 d~IPaDG~vieG~ 147 (679)
T PRK01122 135 EIIPADGEVIEGV 147 (679)
T ss_pred CEEEEEEEEEEcc
Confidence 3445565556664
No 185
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=52.43 E-value=16 Score=34.64 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=28.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHH
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIG 454 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA 454 (885)
+++.+++.++++++++.|++++.+||......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67889999999999999999999999986543
No 186
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=51.91 E-value=16 Score=36.21 Aligned_cols=90 Identities=27% Similarity=0.369 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEee
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 500 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~----tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 500 (885)
|++=+++.|..-++.|=++..+||..+. +++..|+...|. ++.+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-------------------------eeeccC
Confidence 5667788899999999999999998753 455666666652 2111 134444
Q ss_pred Ch-hcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCe-eEEe
Q 002743 501 FP-EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 541 (885)
Q Consensus 501 sP-~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~Adv-GIa~ 541 (885)
.| -.++.-...+|+++- -..-||.-||+.|-|+|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 33 123444566776664 4578999999999999876 4544
No 187
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=51.15 E-value=14 Score=34.43 Aligned_cols=78 Identities=23% Similarity=0.240 Sum_probs=44.8
Q ss_pred HHHHHHHcCCeEEEEEeeecC--C-CCCCC---CCCCceeeEeeccCCCCCcchHHHHHHHHhCCCe-EEEEcCCChHHH
Q 002743 382 VIDKFAERGLRSLGVARQEIP--E-KTKES---PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLAIG 454 (885)
Q Consensus 382 ~~~~~a~~Glr~l~~a~~~~~--~-~~~~~---~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~-v~mlTGD~~~tA 454 (885)
.++.+.+.|+++..+.-+.-+ . ..+.. ...+..++=+ =-+.+.+++.+++|.+.|++ +|+.+|...+.+
T Consensus 19 v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv----~~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~ 94 (116)
T PF13380_consen 19 VLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVV----CVPPDKVPEIVDEAAALGVKAVWLQPGAESEEL 94 (116)
T ss_dssp HHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-----S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHH
T ss_pred HHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEE----EcCHHHHHHHHHHHHHcCCCEEEEEcchHHHHH
Confidence 445566689888887544311 0 00111 1112221111 12456889999999999996 999999999999
Q ss_pred HHHHHHhCC
Q 002743 455 KETGRRLGM 463 (885)
Q Consensus 455 ~~ia~~lGi 463 (885)
.+.+++.|+
T Consensus 95 ~~~a~~~gi 103 (116)
T PF13380_consen 95 IEAAREAGI 103 (116)
T ss_dssp HHHHHHTT-
T ss_pred HHHHHHcCC
Confidence 999999887
No 188
>PTZ00445 p36-lilke protein; Provisional
Probab=50.64 E-value=34 Score=35.38 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeE--eeccCCC----------CCcchHHHHHHHHhCCCeE
Q 002743 376 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG--LLPLFDP----------PRHDSAETIRRALNLGVNV 443 (885)
Q Consensus 376 ~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG--~i~i~D~----------lr~~~~~aI~~l~~aGI~v 443 (885)
.+.....++.+.+.|.|++++-... ++++ .=+--+| ++|+.++-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3455566778889999999875533 3333 0012233 7999999999999999999
Q ss_pred EEEcCCCh
Q 002743 444 KMITGDQL 451 (885)
Q Consensus 444 ~mlTGD~~ 451 (885)
.++|=-..
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 99995443
No 189
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.39 E-value=83 Score=34.52 Aligned_cols=141 Identities=16% Similarity=0.152 Sum_probs=76.9
Q ss_pred cCCCCCcchHHHHHHHHhCCCeE---EEEcCCChHHH------HHHHHHhCCCCCCCCC-------------------cc
Q 002743 421 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGTNMYPS-------------------SS 472 (885)
Q Consensus 421 i~D~lr~~~~~aI~~l~~aGI~v---~mlTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~~ 472 (885)
+.++++++.++.|+++++.|++. .++-||+++.. +..|+++||......- ..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 44667888999999998888763 56678887654 3456678885321100 00
Q ss_pred ccC----cccccc------------------cCcchHHHHHHhcCeEEeeChhcHHHHHHHHhh--cCCEEEEEcCC-cC
Q 002743 473 LLG----QDKDAS------------------IAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG-VN 527 (885)
Q Consensus 473 ~~~----~~~~~~------------------~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~--~g~~V~miGDG-~N 527 (885)
+.| ...... ++...+..+...-..|.=+||.-=.++++...- .|..|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 000001 111122222222223444566655555555432 48999999997 44
Q ss_pred Chh---hhhcCCeeEEec-c--c-hHHHHhccCEEEcCCCc
Q 002743 528 DAP---ALKKADIGIAVA-D--A-TDAARSASDIVLTEPGL 561 (885)
Q Consensus 528 Da~---aLk~AdvGIa~g-~--~-td~a~~aADivl~~~~~ 561 (885)
=.| +|.+++.-+.+- . . ...+-..||+|++-=+-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~ 212 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGR 212 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCC
Confidence 433 566777777663 2 1 12233478999875433
No 190
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=49.27 E-value=3.5e+02 Score=28.73 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=43.7
Q ss_pred CCCCceeeEeeccCCCCCcchHHHHHHHHhC---CCeEEEEcCCChHHHHHHHHH
Q 002743 409 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 409 ~e~~l~llG~i~i~D~lr~~~~~aI~~l~~a---GI~v~mlTGD~~~tA~~ia~~ 460 (885)
...+|.=+=+++=.+.+.||..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4567777777777778899999999999999 999997777888889888765
No 191
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=48.59 E-value=1.1e+02 Score=32.68 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=24.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEE-EEcCCCh-HHHHHHHHHh
Q 002743 423 DPPRHDSAETIRRALNLGVNVK-MITGDQL-AIGKETGRRL 461 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~-mlTGD~~-~tA~~ia~~l 461 (885)
|-|-++..+.++.+++.|++.. +++=... +....+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 4455778888888888888844 5554442 3445555554
No 192
>PRK00208 thiG thiazole synthase; Reviewed
Probab=46.72 E-value=3.9e+02 Score=28.46 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=43.5
Q ss_pred CCCCceeeEeeccCCCCCcchHHHHHHHHhC---CCeEEEEcCCChHHHHHHHHH
Q 002743 409 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 409 ~e~~l~llG~i~i~D~lr~~~~~aI~~l~~a---GI~v~mlTGD~~~tA~~ia~~ 460 (885)
.+.+|.=+=+++=.+.+.||..++|+.++.. |..|+=.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4667777778887788899999999999999 999996667888888887764
No 193
>PTZ00174 phosphomannomutase; Provisional
Probab=45.92 E-value=30 Score=36.74 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=29.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHH
Q 002743 424 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKET 457 (885)
Q Consensus 424 ~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~i 457 (885)
++-+.+.++|+++++.|+++++.||.+.......
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~ 55 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQ 55 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 4778899999999999999999999998755443
No 194
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=45.70 E-value=78 Score=33.59 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=69.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEe--e
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 500 (885)
Q Consensus 423 D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--~ 500 (885)
-.+|+++.+.++.|++.+|.+.+.|+-=-.+..++-++-|...+.. .++ ..-.....++ ....|-. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv--~Vv-SN~M~Fd~~g--------~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV--KVV-SNFMDFDEDG--------VLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE--EEE-EE-EEE-TTS--------BEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe--EEE-eeeEEECCcc--------eEeecCCCce
Confidence 4679999999999999999999999887777777777777543211 111 1000000000 0000100 0
Q ss_pred ChhcHHH-------HHHHHhhcCCEEEEEcCCcCChhhhhcC---CeeEEec--cc-----hHHHHhccCEEEcCCCcch
Q 002743 501 FPEHKYE-------IVKRLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIVLTEPGLSV 563 (885)
Q Consensus 501 sP~~K~~-------iV~~lq~~g~~V~miGDG~NDa~aLk~A---dvGIa~g--~~-----td~a~~aADivl~~~~~~~ 563 (885)
-+-.|-+ .-+.++. ...|...||..-|+.|-.-. +.-+.+| +. -+.=+++=||||.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0112222 1223333 35688999999999997655 3334444 22 2234578899999997666
Q ss_pred HHHHH
Q 002743 564 IISAV 568 (885)
Q Consensus 564 i~~~i 568 (885)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66555
No 195
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=45.53 E-value=1.2e+02 Score=31.44 Aligned_cols=193 Identities=15% Similarity=0.139 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCC-eEEEecc
Q 002743 38 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSA 116 (885)
Q Consensus 38 ~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~-~~Vdes~ 116 (885)
++++..+..+++.+...++-+.+++....... +. +.-++-|....+...|.+|-|.++++.++ +-.|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~----~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KK----VTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EE----EEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----cc----EEEEeccccccchHhhccceeeeecccccccccCccc
Confidence 45666666777777778888887776443322 11 22233478999999999999999996532 2223222
Q ss_pred cc-CCCCccccC--CCC----ccc-----ccceeeeCeEEEEEEEeccchhhhhHh---hhhhccCCCCcHHHHHHHHHH
Q 002743 117 LT-GESLPVTKN--PYD----EVF-----SGSTCKQGEIEAVVIATGVHTFFGKAA---HLVDSTNQVGHFQKVLTAIGN 181 (885)
Q Consensus 117 LT-GEs~pv~K~--~~~----~v~-----~Gs~v~~G~~~~~V~~tG~~T~~gki~---~l~~~~~~~~~~~~~~~~i~~ 181 (885)
|. |+.. +.-. .|+ .-. .|..+..|....-=...|.-+..|.-. ++.+...+........++...
T Consensus 73 l~~g~~~-vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 73 LESGSAY-VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EESSEEE-EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred eeccccc-cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 32 3211 1100 021 122 677777776433212223333333322 122222344444344555554
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-chHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHh
Q 002743 182 FCICSIAVGIVAEIIIMYPVQHR-KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240 (885)
Q Consensus 182 ~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~~l 240 (885)
.+...+....++..++.+..+.. .....+...+...+..+=...|.+++++...+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHH
Confidence 44444444344444444433332 122344555666677777788888888888776543
No 196
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=45.14 E-value=1.9e+02 Score=26.52 Aligned_cols=46 Identities=11% Similarity=0.242 Sum_probs=27.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeC
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 73 (885)
Q Consensus 28 ~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rd 73 (885)
.|...+.+++++++.-++.+...+|.++..+++.+.+.+-.+|+--
T Consensus 17 ~~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT~ 62 (106)
T PRK05585 17 GLSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVVTN 62 (106)
T ss_pred cHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3544444444443333444455666677778888888887777653
No 197
>PRK11507 ribosome-associated protein; Provisional
Probab=44.69 E-value=26 Score=29.49 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.4
Q ss_pred EEEeCCeEEEEeCCCCCCCcEEEEcC
Q 002743 69 KVLRDGRWSEQDASILVPGDVISIKL 94 (885)
Q Consensus 69 ~V~rdg~~~~i~~~~Lv~GDiv~l~~ 94 (885)
.|..||+...-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57889999999999999999998864
No 198
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=44.42 E-value=27 Score=37.69 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=39.8
Q ss_pred eEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002743 416 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 461 (885)
Q Consensus 416 lG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~l 461 (885)
=|.+.--+.+=|++.++|++|+++|++++.+|.-...+....++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3777888889999999999999999999999998887777666554
No 199
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=43.03 E-value=27 Score=37.87 Aligned_cols=48 Identities=23% Similarity=0.222 Sum_probs=35.5
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~i---a~~lGi~ 464 (885)
|.+.-.+.+=|++.++|++|++.|+++..+||....+...+ -+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445677788999999999999999999999764433332 2456764
No 200
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=42.88 E-value=1.3e+02 Score=38.83 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=17.3
Q ss_pred CcEEEEcCCCeeeceEEEEe-eCCeEEEeccccC
Q 002743 87 GDVISIKLGDIVPADARLLE-GDPLKIDQSALTG 119 (885)
Q Consensus 87 GDiv~l~~Gd~VPaD~~ll~-g~~~~Vdes~LTG 119 (885)
|-...+...|.+|=|.++++ |+.+-+|=-.+.|
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 55556666666666666664 3333344444444
No 201
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=42.07 E-value=49 Score=31.93 Aligned_cols=50 Identities=22% Similarity=0.400 Sum_probs=27.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 002743 716 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDI 772 (885)
Q Consensus 716 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 (885)
.++| +|+++++++.+....+..|. +..+.+|.|..+++++....++..|+
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~s-----py~G~~s~~~ftv~fv~m~~~llfDI 82 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYYS-----PYFGLGSVWGFTVFFVVMAAFLLFDI 82 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHhc-----chhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 3456 67788887765544444443 23334556665555555555555553
No 202
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=41.04 E-value=80 Score=34.49 Aligned_cols=104 Identities=24% Similarity=0.326 Sum_probs=59.5
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccc--cCcccccccCcchHHHHHHhcC
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSL--LGQDKDASIAALPVDELIEKAD 495 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~-lGi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 495 (885)
+.+-|.||++ +.|+++|++|.+|+++|--...-|...+.. .|+ ..+ .|+..+.-+....++. -.-+
T Consensus 161 V~vLdRpRH~--~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~v-------D~~~GiGGaPEGVlaAaAlkc--lGG~ 229 (319)
T PRK09479 161 VVVLDRPRHE--ELIAEIREAGARVKLISDGDVAGAIATAFPDTGV-------DILMGIGGAPEGVLAAAALKC--LGGE 229 (319)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCe-------eEEEEcCcChHHHHHHHHHHh--cCce
Confidence 4466888875 889999999999999986555555555521 111 111 1111111111111111 1124
Q ss_pred eEEeeChhcHHHHHHHHhh---------------cCCEEEEEcCCcCChhhhh
Q 002743 496 GFAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 533 (885)
Q Consensus 496 v~ar~sP~~K~~iV~~lq~---------------~g~~V~miGDG~NDa~aLk 533 (885)
+.+|.-|.+..+.-+..+. +|.-|.++.-|+.|...|+
T Consensus 230 mqgRL~~~~~~e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 230 MQGRLLPRNEEERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred eEEeECCCCHHHHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 6777777665544333221 2447889999999999987
No 203
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.69 E-value=99 Score=33.65 Aligned_cols=137 Identities=12% Similarity=0.187 Sum_probs=72.5
Q ss_pred CCCCCcchHHHHHHHHhC-CCe---EEEEcCCChHHH------HHHHHHhCCCCCCCCC------c-------------c
Q 002743 422 FDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPS------S-------------S 472 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~lGi~~~~~~~------~-------------~ 472 (885)
.+.+|++.++.++++++. |++ ..++.||+++.. ...|+++|+....+.- + .
T Consensus 11 a~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (284)
T PRK14179 11 AQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPT 90 (284)
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677888888888776 665 346778886544 4567778885321100 0 0
Q ss_pred ----ccCcccccc------------------cCcchHHHHHHhcCeEEeeChhcHHHHHHHHhh--cCCEEEEEcC-CcC
Q 002743 473 ----LLGQDKDAS------------------IAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGD-GVN 527 (885)
Q Consensus 473 ----~~~~~~~~~------------------~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~--~g~~V~miGD-G~N 527 (885)
+.-...... ++...+..+...-..|.=+||.-=.++++...- .|..++++|- |+-
T Consensus 91 V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~iv 170 (284)
T PRK14179 91 WHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIV 170 (284)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcC
Confidence 000000001 111122222222223445566554455544432 4899999999 555
Q ss_pred Chh---hhhcCCeeEEec-c-chH--HHHhccCEEEcC
Q 002743 528 DAP---ALKKADIGIAVA-D-ATD--AARSASDIVLTE 558 (885)
Q Consensus 528 Da~---aLk~AdvGIa~g-~-~td--~a~~aADivl~~ 558 (885)
=.| +|.+++.-+.+- + ..+ ..-..||+++.-
T Consensus 171 G~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 171 GKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred cHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 554 566666666652 2 222 223479999864
No 204
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.53 E-value=1.1e+02 Score=33.67 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=30.3
Q ss_pred CCCCCcchHHHHHHHHhC-CCe---EEEEcCCChHHH------HHHHHHhCCCC
Q 002743 422 FDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 465 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~lGi~~ 465 (885)
..+++++.++.++++++. |++ ..++-||+++.. ...|+++||..
T Consensus 11 a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 11 AADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 355678888888888876 765 355668876543 45677888853
No 205
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=40.38 E-value=1.1e+02 Score=32.92 Aligned_cols=31 Identities=6% Similarity=0.190 Sum_probs=20.6
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCcCChhhh
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGVNDAPAL 532 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~NDa~aL 532 (885)
|++-.++++.+++.-..-.++|=|+|+..-.
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~ 217 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQI 217 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 4555677888887644555679999855443
No 206
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=39.85 E-value=1.1e+02 Score=30.59 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc-CCChHHHHHHHHHhCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 464 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlT-GD~~~tA~~ia~~lGi~ 464 (885)
+-||+++.++.|++.|+++-+.| -|.+..|+++-+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56899999999999999999999 48899999999999986
No 207
>PLN02591 tryptophan synthase
Probab=39.52 E-value=1.4e+02 Score=31.86 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=20.4
Q ss_pred hhcHHHHHHHHhhcCCEEEEEcCCcCCh
Q 002743 502 PEHKYEIVKRLQERKHICGMTGDGVNDA 529 (885)
Q Consensus 502 P~~K~~iV~~lq~~g~~V~miGDG~NDa 529 (885)
|++=.+.++.+++....-.++|=|+++.
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 5555677888887656667789999843
No 208
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=39.10 E-value=18 Score=29.94 Aligned_cols=25 Identities=32% Similarity=0.521 Sum_probs=14.6
Q ss_pred EEEeCCeEEEEeCCCCCCCcEEEEc
Q 002743 69 KVLRDGRWSEQDASILVPGDVISIK 93 (885)
Q Consensus 69 ~V~rdg~~~~i~~~~Lv~GDiv~l~ 93 (885)
.|..||+.+.-.-..|.|||+|.+.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp HHEETTB----SS----SSEEEEET
T ss_pred ceEECCEEccccCCcCCCCCEEEEC
Confidence 4677999999999999999999993
No 209
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=38.85 E-value=76 Score=31.44 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=42.3
Q ss_pred CChHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 371 CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 371 ~~~~~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
++.....-+..+++.++..|=-.++++...- -+.+.++++.+++.|++++-+||.+
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSGN------------------------S~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSGN------------------------SKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCCC------------------------CHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3334445566677888888866666654331 2588999999999999999999998
Q ss_pred hH
Q 002743 451 LA 452 (885)
Q Consensus 451 ~~ 452 (885)
-.
T Consensus 147 GG 148 (176)
T COG0279 147 GG 148 (176)
T ss_pred Cc
Confidence 43
No 210
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=37.39 E-value=1e+02 Score=33.59 Aligned_cols=106 Identities=20% Similarity=0.291 Sum_probs=58.1
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc--cCcccccccCcchHHHHHHhcCe
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--LGQDKDASIAALPVDELIEKADG 496 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v 496 (885)
+.+.|.||++ +.|+++|++|.+|++++--....|...+ ++... ...+ .|+..+.-++...++. -.-.+
T Consensus 158 V~vLdRpRH~--~lI~eiR~~Gari~Li~DGDV~~ai~~~----~~~s~--vD~~~GiGGaPEGVlaAaAlkc--lGG~~ 227 (309)
T cd01516 158 VVVLDRPRHA--ALIEEIREAGARIKLIPDGDVAAAIATA----LPGSG--VDVLMGIGGAPEGVLAAAALKC--LGGEM 227 (309)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHh----CCCCC--eeEEEECCCChHHHHHHHHHHh--CCcee
Confidence 3456888875 8999999999999999854555555444 22110 1111 1111111111111111 11235
Q ss_pred EEeeChhcHHHHHHHHhh---------------cCCEEEEEcCCcCChhhhhc
Q 002743 497 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALKK 534 (885)
Q Consensus 497 ~ar~sP~~K~~iV~~lq~---------------~g~~V~miGDG~NDa~aLk~ 534 (885)
.+|.-|.+..+.-+..+. +|..|.++.-|+.|...|+-
T Consensus 228 qgrL~~~~~~e~~r~~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~G 280 (309)
T cd01516 228 QGRLLPRNEEERARAREMGITDPNKILTLDDLVRGDDVVFAATGITDGELLKG 280 (309)
T ss_pred EEEECCCCHHHHHHHHHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccCC
Confidence 777777654443332221 24568889999999988873
No 211
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=35.95 E-value=93 Score=30.40 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=35.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHH-------HHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCC
Q 002743 26 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAA-------ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 95 (885)
Q Consensus 26 ~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~-------~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~G 95 (885)
...|-|..+|++++++-.+.-.++++.+.++.. .+.+..+..-.| +-+...+.+..+.-|-||+++..
T Consensus 43 ~tKyRDL~II~~L~ll~l~giq~~~y~~~~~~~~q~~~~~~fi~~vA~~~~V--~~~~v~VNst~l~dG~iVki~~~ 117 (149)
T PF11694_consen 43 DTKYRDLSIIALLLLLLLIGIQYSDYQQNQNQHSQSSQMVHFIESVAKDLGV--SKEEVYVNSTALTDGMIVKIGDK 117 (149)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHhCC--ChheEEEecccccCCeEEEECCc
Confidence 457888887776655554444455544332221 111111111111 22345677888888888877743
No 212
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=35.77 E-value=40 Score=30.37 Aligned_cols=32 Identities=19% Similarity=0.406 Sum_probs=26.1
Q ss_pred CceEEEeCCeEEEEeCCCCCCCcEEEEcCCCee
Q 002743 66 PKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 98 (885)
Q Consensus 66 ~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~V 98 (885)
..-+|.-||+.. -|++++++||+|.|.-|...
T Consensus 32 ~~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 32 EGGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HCCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 345677788866 89999999999999988754
No 213
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=34.61 E-value=1.1e+02 Score=33.45 Aligned_cols=106 Identities=16% Similarity=0.167 Sum_probs=58.5
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc--cCcccccccCcchHHHHHHhcCe
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--LGQDKDASIAALPVDELIEKADG 496 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v 496 (885)
+.+-|.||++ +.|+++|++|.+|++++--....|...+. +... ...+ .|+..+.-++...++. -.-.+
T Consensus 159 V~vLdRpRH~--~lI~eir~~Gari~Li~DGDV~~ai~~~~----~~~~--vD~~~GiGGaPEGVlaAaAlkc--lGG~~ 228 (322)
T PRK12415 159 VIVQERERHQ--DIIDRVRAKGARVKLFGDGDVGASIATAL----PGTG--IDLFVGIGGAPEGVISAAALKC--LGGEM 228 (322)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHhC----CCCC--eeEEEEcCCChHHHHHHHHHHh--CCcee
Confidence 4456888875 89999999999999998545555554442 2110 1111 1111110011111110 11245
Q ss_pred EEeeChhcHHHHHHHHhh---------------cCCEEEEEcCCcCChhhhhc
Q 002743 497 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALKK 534 (885)
Q Consensus 497 ~ar~sP~~K~~iV~~lq~---------------~g~~V~miGDG~NDa~aLk~ 534 (885)
.+|.-|+...+.-+..+. +|..|.++.-|+.|-..|+-
T Consensus 229 q~rL~~~~~~e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~G 281 (322)
T PRK12415 229 QARLVPMNEEEEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLDG 281 (322)
T ss_pred EEEECCCCHHHHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcCC
Confidence 777776654443332221 25678899999999999873
No 214
>PF05975 EcsB: Bacterial ABC transporter protein EcsB; InterPro: IPR010288 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters [].
Probab=33.62 E-value=7.6e+02 Score=28.05 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002743 575 FQRMKNYTIYAVSITIRIVLGF 596 (885)
Q Consensus 575 ~~~i~~~i~~~~~~ni~~~~~~ 596 (885)
.+...||..|.+--++.+++.+
T Consensus 13 ~k~~~kYlr~v~ndh~~l~l~~ 34 (386)
T PF05975_consen 13 WKEQLKYLRYVFNDHFVLYLIF 34 (386)
T ss_pred HHHHHHHHHHHhccHHHHHHHH
Confidence 4455667777776555544444
No 215
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=33.42 E-value=76 Score=35.01 Aligned_cols=51 Identities=20% Similarity=0.124 Sum_probs=41.8
Q ss_pred CCCceeeEeeccCCCCCcchHHHHHHHHhC---CCeEEEEcCCChHHHHHHHHH
Q 002743 410 GAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 460 (885)
Q Consensus 410 e~~l~llG~i~i~D~lr~~~~~aI~~l~~a---GI~v~mlTGD~~~tA~~ia~~ 460 (885)
..+|.=+=+++=..-+-||..++++.++.. |..|...+-|++.+|++++.-
T Consensus 164 ~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 164 GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 445555666666667889999999999999 999988888999999988764
No 216
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=33.34 E-value=2.7e+02 Score=24.35 Aligned_cols=26 Identities=23% Similarity=0.204 Sum_probs=17.3
Q ss_pred HHHHhHHHHHHHHHhcCCCceEEEeC
Q 002743 48 IEENNAGNAAAALMANLAPKTKVLRD 73 (885)
Q Consensus 48 ~~e~~a~~~~~~l~~~~~~~~~V~rd 73 (885)
...+|+++..+++.+.+.+-.+|+-.
T Consensus 22 rpqkK~~k~~~~m~~~L~~Gd~VvT~ 47 (84)
T TIGR00739 22 RPQRKRRKAHKKLIESLKKGDKVLTI 47 (84)
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 34566666667777777777777654
No 217
>PRK10671 copA copper exporting ATPase; Provisional
Probab=32.52 E-value=4.6e+02 Score=33.33 Aligned_cols=99 Identities=17% Similarity=0.210 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-eCCeEEE
Q 002743 35 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKID 113 (885)
Q Consensus 35 i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~~~Vd 113 (885)
-..++++..+-.|+|++-..++.+++.++....-...| . +.-|....+...+..|=|.+++. |+.+-+|
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~-----~-----~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~D 358 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTAR-----V-----VTDEGEKSVPLADVQPGMLLRLTTGDRVPVD 358 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEE-----E-----EeCCcEEEEEHHHcCCCCEEEEcCCCEeeee
Confidence 34455666666777778778888888876654332221 1 23466777888889999999984 4445566
Q ss_pred eccccCCCCccccC--CCCc----ccccceeeeCeEE
Q 002743 114 QSALTGESLPVTKN--PYDE----VFSGSTCKQGEIE 144 (885)
Q Consensus 114 es~LTGEs~pv~K~--~~~~----v~~Gs~v~~G~~~ 144 (885)
=-.+.|++. +.-+ .|+. .-.|..|..|+..
T Consensus 359 g~v~~g~~~-vdeS~lTGEs~pv~k~~gd~V~aGt~~ 394 (834)
T PRK10671 359 GEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVV 394 (834)
T ss_pred EEEEEceEE-EeehhhcCCCCCEecCCCCEEEeccee
Confidence 666666532 2111 1221 2356666666643
No 218
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=32.49 E-value=1.4e+02 Score=33.01 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=38.3
Q ss_pred EeeccCCCCCcchHHHHHHHHhC----CCeEEEEcCCC---h-HHHHHHHHHhCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---L-AIGKETGRRLGMG 464 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~a----GI~v~mlTGD~---~-~tA~~ia~~lGi~ 464 (885)
|++.-.+++-+++.++++.|+.. |+++..+|-.. . ..+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 67777788999999999999998 99999999665 2 3355556777873
No 219
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.94 E-value=1.7e+02 Score=32.01 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=31.2
Q ss_pred CCCCCcchHHHHHHHHhC-CCe---EEEEcCCChHHH------HHHHHHhCCCC
Q 002743 422 FDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 465 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~lGi~~ 465 (885)
.++++++.++-++.+++. |++ +.++.||+++.. ...|+++||..
T Consensus 10 A~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 10 SLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 356678888888888877 665 466788887544 45667788854
No 220
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=31.54 E-value=1.3e+03 Score=30.18 Aligned_cols=217 Identities=15% Similarity=0.146 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe---eCCeEE
Q 002743 36 IVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE---GDPLKI 112 (885)
Q Consensus 36 ~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~---g~~~~V 112 (885)
++++++..+...+.-++.+++.++|++ +.. ......+ ++-|....+...|.+|-|.++++ |+.+-+
T Consensus 197 ~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 197 LCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 444555555555666777777777664 322 1112222 34588999999999999999997 555566
Q ss_pred EeccccCCCCccccC--CCCcc--cc--------c------------ceeeeCeEEEEEEEe-ccchhhhhH--------
Q 002743 113 DQSALTGESLPVTKN--PYDEV--FS--------G------------STCKQGEIEAVVIAT-GVHTFFGKA-------- 159 (885)
Q Consensus 113 des~LTGEs~pv~K~--~~~~v--~~--------G------------s~v~~G~~~~~V~~t-G~~T~~gki-------- 159 (885)
|=-.+.|+. -|.-. .|+.+ .. | ..+..|+....+... |..+..|..
T Consensus 266 D~~ll~g~~-~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~ 344 (1054)
T TIGR01657 266 DSVLLSGSC-IVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTS 344 (1054)
T ss_pred eEEEEeCcE-EEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcccc
Confidence 766677742 22211 13211 11 1 123344433222111 111111110
Q ss_pred -hhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 002743 160 -AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 238 (885)
Q Consensus 160 -~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~~~~i~~~~~~~ 238 (885)
.++++......+.....++-...++..+++..++.+++.+. ........+...+...+..+=.+.|.++++++.++..
T Consensus 345 ~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~ 423 (1054)
T TIGR01657 345 KGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGIN 423 (1054)
T ss_pred chHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHH
Confidence 01111111222222222333323333332222222222221 1111112334445555667778889999999999864
Q ss_pred HhhcCCceeccChhhhhccCceEEeeccCCCCCCCceEE
Q 002743 239 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV 277 (885)
Q Consensus 239 ~l~~~~ilvk~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 277 (885)
.+.-.|++-.++|.+-.---|-|+.++
T Consensus 424 ------------~~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 424 ------------NSLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred ------------HHHHHHHHCCEEEcCcccceecceeeE
Confidence 345667777889998888778887766
No 221
>TIGR00330 glpX fructose-1,6-bisphosphatase, class II. In E. coli, GlpX is found in the glpFKX operon together with a glycerol update protein and glycerol kinase.
Probab=31.34 E-value=1.5e+02 Score=32.32 Aligned_cols=38 Identities=32% Similarity=0.434 Sum_probs=28.4
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 458 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia 458 (885)
+.+.|.||+. +.|+++|++|.+|+++|--....|...+
T Consensus 158 V~vLdRpRH~--~lI~eiR~~Gari~Li~DGDVa~ai~~~ 195 (321)
T TIGR00330 158 VTILAKPRHD--AVIAEMQQLGVRVFAIPDGDVAASILTC 195 (321)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHh
Confidence 3456888875 8899999999999999854554444444
No 222
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=31.18 E-value=2.4e+02 Score=33.32 Aligned_cols=147 Identities=18% Similarity=0.146 Sum_probs=75.3
Q ss_pred eCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCe---------
Q 002743 72 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGE--------- 142 (885)
Q Consensus 72 rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~--------- 142 (885)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.-.. |+. -..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 34777788888888888887755 34445555556443333221 332 24566777777654322
Q ss_pred EEEEEEEeccchhhhhHhhhhhccCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHH-hh--ccccchHhHHHHHHHHHH
Q 002743 143 IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGIVAEIIIM-YP--VQHRKYRDGIDNLLVLLI 218 (885)
Q Consensus 143 ~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~-~~i~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~llv 218 (885)
..+.++++|.+|.- .+ .....+.. ..+..+.+.+.++ .++.+... +. .+...+..++..++...-
T Consensus 125 ~i~~~v~~~~~~k~-~~---------~~~~~~~~~~~~~~~~~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P 193 (499)
T TIGR01494 125 KIAVVVYTGFETKT-PL---------QPKLDRLSDIIFILFVLLIALA-VFLFWAIGLWDPNSIFKIFLRALILLVIAIP 193 (499)
T ss_pred HHHHHHHhcCCCCC-ch---------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcccccHHHHHHHHHHHHHHhcC
Confidence 12334456655421 00 11112222 2333332222222 22222222 11 123456666777777777
Q ss_pred HHcCCchHHHHHHHHHHHH
Q 002743 219 GGIPIAMPTVLSVTMAIGS 237 (885)
Q Consensus 219 ~~iP~aL~~~~~i~~~~~~ 237 (885)
+++|.++|++...+.....
T Consensus 194 ~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 194 IALPLAVTIALAVGDARLA 212 (499)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 8888888888777765544
No 223
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.25 E-value=26 Score=35.06 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.6
Q ss_pred EeeccCCCCCCCce
Q 002743 262 LCSDKTGTLTLNKL 275 (885)
Q Consensus 262 I~~DKTGTLT~n~m 275 (885)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999983
No 224
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=28.67 E-value=2.1e+02 Score=28.54 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=66.0
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHH-HHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHH
Q 002743 428 DSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 506 (885)
Q Consensus 428 ~~~~aI~~l~~aGI~v~mlTGD~~~t-A~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 506 (885)
|.-+++.++++.|-++-+++=++..- ...+.+-+|+. ...+.=-+|++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 56667777776676777666554332 44555555542 1234555677778
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHH-HhccCEEEcCCCcchHHHHHHHhHHHHHHHHH
Q 002743 507 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA-RSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 580 (885)
Q Consensus 507 ~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a-~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~ 580 (885)
..++.+++.|. -+.+|++. ..+.| +.--..++.+.+..++..++.+++++++..++
T Consensus 116 ~~i~~~~~~G~-~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGV-DVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-cEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 88898988884 44677652 12223 23446788888899999999999999887664
No 225
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=28.56 E-value=32 Score=29.91 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=16.2
Q ss_pred EeCCCCCCCcEEEEc-CCCeeec
Q 002743 79 QDASILVPGDVISIK-LGDIVPA 100 (885)
Q Consensus 79 i~~~~Lv~GDiv~l~-~Gd~VPa 100 (885)
+.-.+|.+||.|.+. .||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 345679999999885 8999996
No 226
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.56 E-value=1.8e+02 Score=31.63 Aligned_cols=139 Identities=17% Similarity=0.129 Sum_probs=72.4
Q ss_pred cCCCCCcchHHHHHHHHhCCCe---EEEEcCCChHHH------HHHHHHhCCCCCCCCC-------------------c-
Q 002743 421 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGTNMYPS-------------------S- 471 (885)
Q Consensus 421 i~D~lr~~~~~aI~~l~~aGI~---v~mlTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~- 471 (885)
+.+.+|++.++-|+++++.|++ ..++-||+++.. ...|+++|+....+.- .
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPK 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 3456678888888888877775 355668876544 4456777875321110 0
Q ss_pred ---cccCccccccc------------------CcchHHHHHHhcCeEEeeChhcHHHHHHHHh--hcCCEEEEEcCCcC-
Q 002743 472 ---SLLGQDKDASI------------------AALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ERKHICGMTGDGVN- 527 (885)
Q Consensus 472 ---~~~~~~~~~~~------------------~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq--~~g~~V~miGDG~N- 527 (885)
.+.-....... +...+..+...-..|.=+||.-=.++++.++ -.|..|+++|-|..
T Consensus 91 V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iV 170 (285)
T PRK14189 91 IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIV 170 (285)
T ss_pred CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 00000000111 1112222222223344455654455555443 24899999999865
Q ss_pred ---ChhhhhcCCeeEEe--ccchH--HHHhccCEEEcCC
Q 002743 528 ---DAPALKKADIGIAV--ADATD--AARSASDIVLTEP 559 (885)
Q Consensus 528 ---Da~aLk~AdvGIa~--g~~td--~a~~aADivl~~~ 559 (885)
=+.+|.+.+.-+.+ ....+ ..-..||+++.--
T Consensus 171 GkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 171 GKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAV 209 (285)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcC
Confidence 23455555555544 32222 2335899998653
No 227
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=28.50 E-value=81 Score=30.98 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=37.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002743 422 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 465 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~ 465 (885)
.=.+||++.+.+++|++. +++.+.|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345799999999999955 9999999999999999999998753
No 228
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=28.15 E-value=29 Score=36.64 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=48.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhc--Ce--EEeeC
Q 002743 426 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA--DG--FAGVF 501 (885)
Q Consensus 426 r~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v--~ar~s 501 (885)
-++..++++.+++.|++. ++|......+.......|.. .+-..++.. +. ...-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 478889999998899997 67776544333222222211 111111110 00 11112
Q ss_pred hhcHHHHHHHHhhc-CCEEEEEcCC-cCChhhhhcCCee
Q 002743 502 PEHKYEIVKRLQER-KHICGMTGDG-VNDAPALKKADIG 538 (885)
Q Consensus 502 P~~K~~iV~~lq~~-g~~V~miGDG-~NDa~aLk~AdvG 538 (885)
|+-=....+.+... ...+.|+||. .+|..+=++|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 22112333344322 3469999999 5999988887764
No 229
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.14 E-value=2.6e+02 Score=30.30 Aligned_cols=137 Identities=11% Similarity=0.151 Sum_probs=73.9
Q ss_pred CCCCCcchHHHHHHHHhCCCe----EEEEcCCChHHH------HHHHHHhCCCCCCCCC------c--------------
Q 002743 422 FDPPRHDSAETIRRALNLGVN----VKMITGDQLAIG------KETGRRLGMGTNMYPS------S-------------- 471 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~----v~mlTGD~~~tA------~~ia~~lGi~~~~~~~------~-------------- 471 (885)
.+.+|++.++-++++++.|.+ ..++-||+++.. ...|+++||....+.- +
T Consensus 11 A~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~ 90 (278)
T PRK14172 11 ALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNN 90 (278)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456678888888888877742 456778887654 4457778875321100 0
Q ss_pred ---cccCccccccc------------------CcchHHHHHHhcCeEEeeChhcHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002743 472 ---SLLGQDKDASI------------------AALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN- 527 (885)
Q Consensus 472 ---~~~~~~~~~~~------------------~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~--~g~~V~miGDG~N- 527 (885)
.+.-....... +...+..+...-..|.=+||.-=.++++.++- .|..|+++|.+..
T Consensus 91 V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~V 170 (278)
T PRK14172 91 VHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIV 170 (278)
T ss_pred CCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 00000000011 11112222222223445667666666666543 4899999999864
Q ss_pred ---ChhhhhcCCeeEEe--ccchHH--HHhccCEEEcC
Q 002743 528 ---DAPALKKADIGIAV--ADATDA--ARSASDIVLTE 558 (885)
Q Consensus 528 ---Da~aLk~AdvGIa~--g~~td~--a~~aADivl~~ 558 (885)
=+-+|.+.+.-+.+ +...+. .-..||+++..
T Consensus 171 GkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 171 GKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 23466666655555 333232 22479999864
No 230
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=27.62 E-value=1.3e+02 Score=25.20 Aligned_cols=33 Identities=18% Similarity=0.071 Sum_probs=24.3
Q ss_pred CCceEEEeCCeEEEEeC---CCCCCCcEEEEcCCCe
Q 002743 65 APKTKVLRDGRWSEQDA---SILVPGDVISIKLGDI 97 (885)
Q Consensus 65 ~~~~~V~rdg~~~~i~~---~~Lv~GDiv~l~~Gd~ 97 (885)
...+.|-.+|..++++. .++.|||.|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 35678888999999864 4578999999999843
No 231
>PRK12388 fructose-1,6-bisphosphatase II-like protein; Reviewed
Probab=27.08 E-value=1.9e+02 Score=31.61 Aligned_cols=38 Identities=29% Similarity=0.369 Sum_probs=28.7
Q ss_pred eccCCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 002743 419 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 458 (885)
Q Consensus 419 i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia 458 (885)
+.+-|.||++ +.|+++|++|.+|+++|--....|...+
T Consensus 158 V~vLdRpRH~--~lI~eiR~~GarI~Li~DGDVa~ai~~~ 195 (321)
T PRK12388 158 MVTLDKPRLS--AAIEEATQLGVKVFALPDGDVAASVLTC 195 (321)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHh
Confidence 3456888875 8899999999999999854555445444
No 232
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.79 E-value=2.8e+02 Score=30.21 Aligned_cols=137 Identities=12% Similarity=0.142 Sum_probs=74.2
Q ss_pred CCCCCcchHHHHHHHHhC-CCe---EEEEcCCChHHH------HHHHHHhCCCCCCCC--Cc-----------------c
Q 002743 422 FDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYP--SS-----------------S 472 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~lGi~~~~~~--~~-----------------~ 472 (885)
...+|++.++.++.+++. |++ ..++.||+++.. ...|+++||....+. .. .
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 89 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPD 89 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 345678888888888877 776 356688887644 456777888542211 00 0
Q ss_pred ccC----cccccc------------------cCcchHHHHHHhcCeEEeeChhcHHHHHHHHhh--cCCEEEEEcCCcC-
Q 002743 473 LLG----QDKDAS------------------IAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN- 527 (885)
Q Consensus 473 ~~~----~~~~~~------------------~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~lq~--~g~~V~miGDG~N- 527 (885)
+.| ..+... ++...+..+......|.=+||.-=.++++.++- .|..|.++|-+..
T Consensus 90 V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 169 (286)
T PRK14184 90 IDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIV 169 (286)
T ss_pred CceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 000 000001 111222222222233455666655555555542 4899999999854
Q ss_pred ---Chhhhhc------CCeeEEeccchH--HHHhccCEEEcC
Q 002743 528 ---DAPALKK------ADIGIAVADATD--AARSASDIVLTE 558 (885)
Q Consensus 528 ---Da~aLk~------AdvGIa~g~~td--~a~~aADivl~~ 558 (885)
=+-+|.+ |.|-+.-....+ ..-..||+++..
T Consensus 170 G~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 170 GKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred hHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 2234544 566665554333 234589999864
No 233
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=25.61 E-value=5.5e+02 Score=23.91 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCEEEEEcCCcC--ChhhhhcCCeeEEec
Q 002743 506 YEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVA 542 (885)
Q Consensus 506 ~~iV~~lq~~g~~V~miGDG~N--Da~aLk~AdvGIa~g 542 (885)
.++++.+. +=..+...|-|.| |..++++-+|-++=.
T Consensus 52 ~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 45566663 3347888999998 788888888888764
No 234
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=25.50 E-value=1.4e+02 Score=32.57 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=26.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHH-HHHHHHhCCC
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGMG 464 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~~~tA-~~ia~~lGi~ 464 (885)
+|+...-+.|+..|.+++++|.+....+ ++..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 4667777888999999999997764433 4455556653
No 235
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=25.39 E-value=5.9e+02 Score=31.86 Aligned_cols=74 Identities=20% Similarity=0.207 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-eCCeEEEecc
Q 002743 38 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKIDQSA 116 (885)
Q Consensus 38 ~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~~~Vdes~ 116 (885)
++++..+-.+++.+...++-+.+.++......- -.. +.-|....+...+.+|-|.+++. |+.+-+|=-.
T Consensus 212 i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~-----a~v-----ir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~v 281 (741)
T PRK11033 212 VLLLFLIGERLEGYAASRARRGVSALMALVPET-----ATR-----LRDGEREEVAIADLRPGDVIEVAAGGRLPADGKL 281 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE-----EEE-----EECCEEEEEEHHHCCCCCEEEECCCCEEecceEE
Confidence 444555666777778888888888765543322 122 24577888888899999999984 4445566666
Q ss_pred ccCCC
Q 002743 117 LTGES 121 (885)
Q Consensus 117 LTGEs 121 (885)
+.|++
T Consensus 282 i~g~~ 286 (741)
T PRK11033 282 LSPFA 286 (741)
T ss_pred EECcE
Confidence 66654
No 236
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=25.37 E-value=5.9e+02 Score=30.53 Aligned_cols=69 Identities=14% Similarity=0.171 Sum_probs=50.8
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHH
Q 002743 428 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 506 (885)
Q Consensus 428 ~~~~aI~~l~~aGI~v~mlTGD~~-~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 506 (885)
|+-.+++.+++.+-++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 677788888888778888876663 3455566666653 2357777888999
Q ss_pred HHHHHHhhcCCEEEEEcCCc
Q 002743 507 EIVKRLQERKHICGMTGDGV 526 (885)
Q Consensus 507 ~iV~~lq~~g~~V~miGDG~ 526 (885)
..|+.++++|..| .+||++
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~ 164 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGL 164 (538)
T ss_pred HHHHHHHHCCCCE-EEcCch
Confidence 9999999999655 678874
No 237
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=25.35 E-value=6.5e+02 Score=25.88 Aligned_cols=146 Identities=17% Similarity=0.239 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEEeeecCCCC-----CCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCCh
Q 002743 377 KKVHAVIDKFAERGLRSLGVARQEIPEKT-----KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 451 (885)
Q Consensus 377 ~~~~~~~~~~a~~Glr~l~~a~~~~~~~~-----~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~~ 451 (885)
+...+..+.+.+.|.|++-+..+.-+..+ .+... +-..+|.=.+-+ .+-++.+.++|.+..+..+++.
T Consensus 22 ~~~~~~~~a~~~gGi~~iEvt~~~~~~~~~i~~l~~~~~-~~~~iGaGTV~~------~~~~~~a~~aGA~fivsp~~~~ 94 (206)
T PRK09140 22 DEALAHVGALIEAGFRAIEIPLNSPDPFDSIAALVKALG-DRALIGAGTVLS------PEQVDRLADAGGRLIVTPNTDP 94 (206)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHcC-CCcEEeEEecCC------HHHHHHHHHcCCCEEECCCCCH
Confidence 45566678888899999988876532111 01111 124455544443 4567888899999999999988
Q ss_pred HHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHH-hcCeEEeeChhcH--HHHHHHHhhc---CCEEEEEcCC
Q 002743 452 AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE-KADGFAGVFPEHK--YEIVKRLQER---KHICGMTGDG 525 (885)
Q Consensus 452 ~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ar~sP~~K--~~iV~~lq~~---g~~V~miGDG 525 (885)
..... +++.|+.. +.| ..+.+++.+..+ .++.. ..+|.++ .+.++.+++. .-.+..+| |
T Consensus 95 ~v~~~-~~~~~~~~-------~~G-----~~t~~E~~~A~~~Gad~v-k~Fpa~~~G~~~l~~l~~~~~~~ipvvaiG-G 159 (206)
T PRK09140 95 EVIRR-AVALGMVV-------MPG-----VATPTEAFAALRAGAQAL-KLFPASQLGPAGIKALRAVLPPDVPVFAVG-G 159 (206)
T ss_pred HHHHH-HHHCCCcE-------Ecc-----cCCHHHHHHHHHcCCCEE-EECCCCCCCHHHHHHHHhhcCCCCeEEEEC-C
Confidence 76654 55666531 111 122333333332 22322 2455442 4566666653 36788888 8
Q ss_pred cC--ChhhhhcC-CeeEEeccc
Q 002743 526 VN--DAPALKKA-DIGIAVADA 544 (885)
Q Consensus 526 ~N--Da~aLk~A-dvGIa~g~~ 544 (885)
+| +++.+.+| -.|++++++
T Consensus 160 I~~~n~~~~~~aGa~~vav~s~ 181 (206)
T PRK09140 160 VTPENLAPYLAAGAAGFGLGSA 181 (206)
T ss_pred CCHHHHHHHHHCCCeEEEEehH
Confidence 75 55655555 445666543
No 238
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=24.72 E-value=1.6e+02 Score=32.72 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEeeecCCCC--------CCCCCCCceeeEeeccCCCCCcc--hHHHHHHHHhCCCe--
Q 002743 375 VRKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KESPGAPWQLVGLLPLFDPPRHD--SAETIRRALNLGVN-- 442 (885)
Q Consensus 375 ~~~~~~~~~~~~a~~Glr~l~~a~~~~~~~~--------~~~~e~~l~llG~i~i~D~lr~~--~~~aI~~l~~aGI~-- 442 (885)
.-+...++++-+.+.|++=+.++.|.-+-.. .+..+.+|. +|++---....-- +.-.|-.|...||-
T Consensus 149 mveSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPLH-lGVTEAG~~~~G~IKSaigig~LL~~GIGDT 227 (346)
T TIGR00612 149 MVQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPLH-LGVTEAGMGVKGIVKSSAGIGILLARGIGDT 227 (346)
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCce-eccccCCCCCCchhHHHHHHHHHHhhCCCCe
Confidence 3344556667777788888888877533210 011122222 4444333333222 34457788888883
Q ss_pred E-EEEcCCCh---HHHHHHHHHhCCCCCCCCCccccCcccccccCcchHHHHHHhcCeEEeeChhcHH----HHHHHHhh
Q 002743 443 V-KMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY----EIVKRLQE 514 (885)
Q Consensus 443 v-~mlTGD~~---~tA~~ia~~lGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~----~iV~~lq~ 514 (885)
+ +=+|+|.. .+|.+|-+.+|+-..... .+ . +.-|.|+.- +=. ++-+.++.
T Consensus 228 IRVSLT~dP~~EV~va~~IL~slglr~~g~~--ii-S------------------CPtCGR~~~-dl~~~~~~ve~~l~~ 285 (346)
T TIGR00612 228 IRVSLTDDPTHEVPVAFEILQSLGLRARGVE--IV-A------------------CPSCGRTGF-DVEKVVRRVQEALFH 285 (346)
T ss_pred EEEECCCCcHHHHHHHHHHHHHcCCCcCCCe--EE-E------------------CCCCCCcCC-CHHHHHHHHHHHHhc
Confidence 3 34788874 467888899998543111 10 0 112334321 112 22233332
Q ss_pred --cCCEEEEEcCCcCChhhhhcCCeeEEec-cch
Q 002743 515 --RKHICGMTGDGVNDAPALKKADIGIAVA-DAT 545 (885)
Q Consensus 515 --~g~~V~miGDG~NDa~aLk~AdvGIa~g-~~t 545 (885)
..-.|+..|==+|-..--+.||+|||-| .+.
T Consensus 286 ~~~~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 286 LKTPLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCCCCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 3578999999999999999999999986 543
No 239
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=24.68 E-value=1.1e+02 Score=28.25 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=28.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 463 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~~~tA~~ia~~lGi 463 (885)
--+++.++++.+++.|++++.+|++.+ -...+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 346899999999999999999999874 2334554453
No 240
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=24.28 E-value=8.5 Score=45.44 Aligned_cols=205 Identities=12% Similarity=0.085 Sum_probs=120.3
Q ss_pred HHcCCeEEEEE-eeecCCC---CCCCCCCCc---------eeeEeeccCCCCCcchHHHHHHHHhCCCeEEEEc------
Q 002743 387 AERGLRSLGVA-RQEIPEK---TKESPGAPW---------QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT------ 447 (885)
Q Consensus 387 a~~Glr~l~~a-~~~~~~~---~~~~~e~~l---------~llG~i~i~D~lr~~~~~aI~~l~~aGI~v~mlT------ 447 (885)
+..|+|.+-+- +.+.+.. .+++.+.++ ..+-+.--.+++++.+.++|+++.+.|.+-.=+.
T Consensus 392 ara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e 471 (942)
T KOG0205|consen 392 ARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPE 471 (942)
T ss_pred HhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhcccc
Confidence 56788887643 2222221 122333332 3445666788999999999999988887632221
Q ss_pred -------------C-----CC--hHHHHHH--HHHhCCCCCCCCCccc-----cCccc--------ccccCcchHHHHHH
Q 002743 448 -------------G-----DQ--LAIGKET--GRRLGMGTNMYPSSSL-----LGQDK--------DASIAALPVDELIE 492 (885)
Q Consensus 448 -------------G-----D~--~~tA~~i--a~~lGi~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~~~~ 492 (885)
| |. ..+|..+ |..+|....+.....+ ++..+ ...+-+...++-++
T Consensus 472 ~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~ 551 (942)
T KOG0205|consen 472 KTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMP 551 (942)
T ss_pred ccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCC
Confidence 1 21 1233333 3333432221111111 00000 00111222334444
Q ss_pred hcCeEEeeChhcHHHHHHHHhhcCCEEEEEcCCcCChhhhhcCCeeEEeccchHHHHhccCEEEcCCCcchHHHHHHHhH
Q 002743 493 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 572 (885)
Q Consensus 493 ~~~v~ar~sP~~K~~iV~~lq~~g~~V~miGDG~NDa~aLk~AdvGIa~g~~td~a~~aADivl~~~~~~~i~~~i~~gR 572 (885)
...++.-+.|.|+..-|--.++.+.+..+.++|.++.+-...+|=+.|+..+.....-+.+..-.+...+-++..-..|+
T Consensus 552 ~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSv 631 (942)
T KOG0205|consen 552 GSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (942)
T ss_pred CCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchh
Confidence 55566677788888888878888888889999999999888888888775444433333333344455555666677899
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002743 573 AIFQRMKNYTIYAVSITIR 591 (885)
Q Consensus 573 ~~~~~i~~~i~~~~~~ni~ 591 (885)
.+..++....+|.-.+|..
T Consensus 632 iI~avltSraIfqrmknyt 650 (942)
T KOG0205|consen 632 IISAVLTSRAIFQRMKNYT 650 (942)
T ss_pred hHHHHHHHHHHHHHHhhhe
Confidence 9999999888888777764
No 241
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=24.27 E-value=95 Score=32.66 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=27.5
Q ss_pred EeeccCCCCCcchHHHHHHHHhCCCeEEEEcCCC
Q 002743 417 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 450 (885)
Q Consensus 417 G~i~i~D~lr~~~~~aI~~l~~aGI~v~mlTGD~ 450 (885)
|++.-.+.+=|++.++|+.+++.|++++++|...
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~ 40 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNS 40 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCC
Confidence 4444456667799999999999999999999444
No 242
>PF15584 Imm44: Immunity protein 44
Probab=24.18 E-value=34 Score=30.17 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=16.3
Q ss_pred CCcEEEEcCCCeeeceEEEE
Q 002743 86 PGDVISIKLGDIVPADARLL 105 (885)
Q Consensus 86 ~GDiv~l~~Gd~VPaD~~ll 105 (885)
+.+-..|+.|++|||||+-=
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999873
No 243
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=23.47 E-value=1.5e+03 Score=29.09 Aligned_cols=84 Identities=18% Similarity=0.159 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeC-CCCCCCcEEEEcCCCeeeceEEEEe-eCCeEEEe
Q 002743 37 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDA-SILVPGDVISIKLGDIVPADARLLE-GDPLKIDQ 114 (885)
Q Consensus 37 ~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~-~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~~~Vde 114 (885)
+++++..+-.++..+...++-+++.++..... . +...+.- ++-.-|....+...|.+|=|.++++ |+.+-+|=
T Consensus 127 ~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~----~-~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 127 VIALMVAISTLLNFIQEARSTKAADALKAMVS----N-TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----C-eEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 34444445555555677777777776543322 1 2222211 0000166889999999999999996 44455666
Q ss_pred ccccCCCCccc
Q 002743 115 SALTGESLPVT 125 (885)
Q Consensus 115 s~LTGEs~pv~ 125 (885)
-.+.|+..-+.
T Consensus 202 ~li~g~~l~VD 212 (902)
T PRK10517 202 RILQARDLFVA 212 (902)
T ss_pred EEEEcCceEEE
Confidence 66667654333
No 244
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=23.06 E-value=3.7e+02 Score=28.43 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=22.0
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCC--hHHHHHHHH-HhCC
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQ--LAIGKETGR-RLGM 463 (885)
Q Consensus 427 ~~~~~aI~~l~~aGI~v~mlTGD~--~~tA~~ia~-~lGi 463 (885)
++..+.++.+++.|++..++-..+ .+..+.+++ ..|.
T Consensus 116 ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~ 155 (242)
T cd04724 116 EEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGF 155 (242)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCC
Confidence 577788888888888765533333 233445554 4443
No 245
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.06 E-value=1.5e+02 Score=32.20 Aligned_cols=44 Identities=14% Similarity=0.198 Sum_probs=32.4
Q ss_pred CCCCCcchHHHHHHHHhCCCe---EEEEcCCChHHH------HHHHHHhCCCC
Q 002743 422 FDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 465 (885)
Q Consensus 422 ~D~lr~~~~~aI~~l~~aGI~---v~mlTGD~~~tA------~~ia~~lGi~~ 465 (885)
.++++++.++.++.+++.|++ ..++-||+++.. ...|+++|+..
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 356778889999999888876 466778887654 44677888854
No 246
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.03 E-value=4.3e+02 Score=33.99 Aligned_cols=226 Identities=15% Similarity=0.097 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCc------eEE----EeCCe
Q 002743 6 SWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------TKV----LRDGR 75 (885)
Q Consensus 6 ~~~l~~aai~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~------~~V----~rdg~ 75 (885)
.....+++.+....... .++.....++++..+.....-++..++-++++++....... ..+ +.-|.
T Consensus 87 ~~~a~~s~~~~~~~~~~----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGD 162 (917)
T COG0474 87 LVAALLSAFVGDWVDAG----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGD 162 (917)
T ss_pred HHHHHHHHHhhcccccC----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCc
Confidence 33444455555443211 14444555555555556888888888888888886654332 111 23578
Q ss_pred EEEEeCCCCCCCcEEEEcCCCeeeceEEEEeeCCeEEEeccc--cCCCCccc---c---CCCCcccccceeeeCeEEEEE
Q 002743 76 WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL--TGESLPVT---K---NPYDEVFSGSTCKQGEIEAVV 147 (885)
Q Consensus 76 ~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~~~Vdes~L--TGEs~pv~---K---~~~~~v~~Gs~v~~G~~~~~V 147 (885)
...+.+.|.+|-|...++..+ .=+|=-.|.|++.-|+--.. ++|..|.. + ..|..+.+|.-..--...|.-
T Consensus 163 iV~l~~gd~vPAD~rLl~~~~-l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~ 241 (917)
T COG0474 163 IVLLEAGDVVPADLRLLESSD-LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFE 241 (917)
T ss_pred EEEECCCCccccceEEEEecC-ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCc
Confidence 888999999999999998877 44455555554433322211 22333332 3 246677777643333344445
Q ss_pred EEeccchhhhhHhhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHHHcCCchHH
Q 002743 148 IATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 227 (885)
Q Consensus 148 ~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL~~ 227 (885)
+.-|..+..-...+.. .+.-...+.+....+..+++...++..+...+.....+...+..++.-++++.--+.|..+-+
T Consensus 242 T~~G~ia~~~~~~~~~-~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti 320 (917)
T COG0474 242 TEFGKIARLLPTKKEV-KTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTI 320 (917)
T ss_pred cHHHHHHHhhcccccc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHH
Confidence 5555544333222111 111112334444445444443333323332222121133456677777788888888888888
Q ss_pred HHHHHHHHHH
Q 002743 228 VLSVTMAIGS 237 (885)
Q Consensus 228 ~~~i~~~~~~ 237 (885)
++.+....=+
T Consensus 321 ~la~g~~~ma 330 (917)
T COG0474 321 ALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHH
Confidence 7777665433
No 247
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.94 E-value=1.4e+02 Score=32.52 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=33.0
Q ss_pred cCCCCCcchHHHHHHHHhCCCeE---EEEcCCChHHH------HHHHHHhCCCC
Q 002743 421 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 465 (885)
Q Consensus 421 i~D~lr~~~~~aI~~l~~aGI~v---~mlTGD~~~tA------~~ia~~lGi~~ 465 (885)
+.+.++++.++.++.+++.|+++ .++-||+++.. ...|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 44567888899999998888764 55689887654 44667888854
No 248
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=22.89 E-value=1.5e+02 Score=36.04 Aligned_cols=66 Identities=24% Similarity=0.328 Sum_probs=43.1
Q ss_pred eCCCCCCCcEEEEc-CCCeeec-eEEEEeeCCeEEEeccccCCCCccccCCCCcccccceeeeCeEEEEEEEecc-chh
Q 002743 80 DASILVPGDVISIK-LGDIVPA-DARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV-HTF 155 (885)
Q Consensus 80 ~~~~Lv~GDiv~l~-~Gd~VPa-D~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~-~T~ 155 (885)
.-.+|.+||-|.|+ .||+||- ++++.+ -=+|+..|.. -|...-..||.+...+..+..-.++. .|.
T Consensus 364 ~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e---------~R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~ 432 (667)
T COG0272 364 KRKDIRIGDTVVVRKAGDVIPQVVGVVLE---------KRPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLNCP 432 (667)
T ss_pred HhcCCCCCCEEEEEecCCCCcceeeeecc---------cCCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCCCh
Confidence 35889999999986 8999996 333332 2345555543 44444577888888666666666664 443
No 249
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.50 E-value=1.3e+02 Score=32.80 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.7
Q ss_pred cCCCCCcchHHHHHHHHhCCCe---EEEEcCCChHHH------HHHHHHhCCCC
Q 002743 421 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 465 (885)
Q Consensus 421 i~D~lr~~~~~aI~~l~~aGI~---v~mlTGD~~~tA------~~ia~~lGi~~ 465 (885)
+.+.++++.++-++.+++.|++ +.++.||+++.. ...|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999888886 566789987654 45677889854
No 250
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=22.39 E-value=1.5e+03 Score=28.90 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCCceEEEeCCeEEEEeCCCCC-CCcEEEEcCCCeeeceEEEEee-CCeEEEe
Q 002743 37 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV-PGDVISIKLGDIVPADARLLEG-DPLKIDQ 114 (885)
Q Consensus 37 ~~~~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~Lv-~GDiv~l~~Gd~VPaD~~ll~g-~~~~Vde 114 (885)
+++++..+...+..+...++-+++.+...-.. -+...+.-.... -|....+...|.+|=|.++++. +.+-+|=
T Consensus 93 iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~-----~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg 167 (867)
T TIGR01524 93 IIALMVLASGLLGFIQESRAERAAYALKNMVK-----NTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADA 167 (867)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----CeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccE
Confidence 34444445555555666666555554322211 111111100000 3778889999999999999964 3344555
Q ss_pred ccccCCCC
Q 002743 115 SALTGESL 122 (885)
Q Consensus 115 s~LTGEs~ 122 (885)
-.+.|++.
T Consensus 168 ~li~g~~l 175 (867)
T TIGR01524 168 RVISARDL 175 (867)
T ss_pred EEEecCce
Confidence 55556543
No 251
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=21.63 E-value=1.8e+03 Score=28.41 Aligned_cols=20 Identities=25% Similarity=0.312 Sum_probs=9.8
Q ss_pred CeEEEEeCCCCCCCcEEEEc
Q 002743 74 GRWSEQDASILVPGDVISIK 93 (885)
Q Consensus 74 g~~~~i~~~~Lv~GDiv~l~ 93 (885)
|....+...|.+|-|.+.++
T Consensus 94 GDiv~l~~Gd~IPaD~~ll~ 113 (917)
T TIGR01116 94 GDIVELAVGDKVPADIRVLS 113 (917)
T ss_pred CCEEEECCCCEeeccEEEEE
Confidence 44444555555555544444
No 252
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=21.63 E-value=1.2e+02 Score=25.29 Aligned_cols=49 Identities=35% Similarity=0.420 Sum_probs=32.6
Q ss_pred HHHHHhhcCCEEEEEcCC-cCChhhhhcCCee-EEeccc----hHHH--HhccCEEE
Q 002743 508 IVKRLQERKHICGMTGDG-VNDAPALKKADIG-IAVADA----TDAA--RSASDIVL 556 (885)
Q Consensus 508 iV~~lq~~g~~V~miGDG-~NDa~aLk~AdvG-Ia~g~~----td~a--~~aADivl 556 (885)
..+.+.-....+.||||. ..|+.+=+++++- |.+..| .+.. ...+|+|+
T Consensus 13 a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 13 ALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 344444334569999999 9999999999886 444322 2221 35788887
No 253
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=21.47 E-value=1.6e+02 Score=29.39 Aligned_cols=82 Identities=20% Similarity=0.292 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceeeEeeccCCCCCcchHHHHHHHHhCCCe---EEEEcCCChHH
Q 002743 377 KKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI 453 (885)
Q Consensus 377 ~~~~~~~~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~aI~~l~~aGI~---v~mlTGD~~~t 453 (885)
+++.+-++++.+.|.+++.++-.. +.....=..-+|+=.+.---+|-...-=+.|++.++. |+|+ ||+..|
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~-----e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~T 122 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNK-----ESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFT 122 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCC-----HHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhh
Confidence 344556778889999999887432 1111111122344444445566666666666677774 7888 999999
Q ss_pred HHHHHHHhCCC
Q 002743 454 GKETGRRLGMG 464 (885)
Q Consensus 454 A~~ia~~lGi~ 464 (885)
=.--|++.|+-
T Consensus 123 DVlggnr~G~~ 133 (175)
T COG2179 123 DVLGGNRAGMR 133 (175)
T ss_pred hhhcccccCcE
Confidence 99999999974
No 254
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=20.86 E-value=3.5e+02 Score=30.55 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC-----hHHHHHHHHHhCCC
Q 002743 425 PRHDSAETIRRALNLGVNVKMITGDQ-----LAIGKETGRRLGMG 464 (885)
Q Consensus 425 lr~~~~~aI~~l~~aGI~v~mlTGD~-----~~tA~~ia~~lGi~ 464 (885)
..++....+..+++.||+++.=+|-- ....++++++.|+.
T Consensus 56 ~~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~ 100 (362)
T PF07287_consen 56 FVRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLS 100 (362)
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCC
Confidence 34578889999999999998887743 35567788888885
No 255
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=20.24 E-value=85 Score=34.18 Aligned_cols=40 Identities=23% Similarity=0.252 Sum_probs=30.0
Q ss_pred ceeeEeeccCCCCCcchHHHHHHHHhCCCe-EEEEcCCChH
Q 002743 413 WQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLA 452 (885)
Q Consensus 413 l~llG~i~i~D~lr~~~~~aI~~l~~aGI~-v~mlTGD~~~ 452 (885)
++.+--+...|.-|.+..+-+..++.+||+ +..+|||.+.
T Consensus 71 ~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 71 IEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp --EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred CceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 345566777888888999999999999996 9999999864
No 256
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.24 E-value=1.8e+02 Score=24.85 Aligned_cols=47 Identities=13% Similarity=0.270 Sum_probs=35.7
Q ss_pred eeccCCCCCcchHHHHHHHHhCCCeEEE-EcCCChHHHHHHHHHhCCC
Q 002743 418 LLPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIGKETGRRLGMG 464 (885)
Q Consensus 418 ~i~i~D~lr~~~~~aI~~l~~aGI~v~m-lTGD~~~tA~~ia~~lGi~ 464 (885)
++++.+..++.+.+..+.||+.|+++.+ ..+.+..--..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3444566788889999999999999988 4566666666677888864
No 257
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=20.22 E-value=83 Score=32.97 Aligned_cols=56 Identities=27% Similarity=0.389 Sum_probs=28.1
Q ss_pred cHHHHHHHHhhc-C------CEEEEEcCCcCChhhhhcC------CeeEEeccch-HHHHhccCEEEcCC
Q 002743 504 HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA------DIGIAVADAT-DAARSASDIVLTEP 559 (885)
Q Consensus 504 ~K~~iV~~lq~~-g------~~V~miGDG~NDa~aLk~A------dvGIa~g~~t-d~a~~aADivl~~~ 559 (885)
.|...|+.+-+. + ..++++||...|-.|++.. +++|-++..+ -.-..+|++-+.++
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 488888877654 3 3699999999999998773 5677777443 22345677766554
Done!