Query 002743
Match_columns 885
No_of_seqs 407 out of 3408
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 17:50:11 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002743.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1459-1463//hhsearch_pdb/002743hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b8c_A ATPase 2, plasma membra 1.0 1 1 1177.7 -1.7 817 1-817 65-881 (885)
2 1mhs_A Proton pump, plasma mem 1.0 1 1 1069.1 59.1 781 1-819 120-913 (920)
3 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 997.2 77.0 777 1-780 101-1017(1028)
4 3ixz_A Potassium-transporting 1.0 1 1 992.6 82.2 777 1-780 106-1023(1034)
5 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 973.5 76.2 779 1-781 58-993 (995)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 725.6 52.7 523 27-611 185-712 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 716.1 44.5 522 28-615 173-696 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 709.2 43.2 521 28-614 95-617 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 268.2 0.0 259 236-581 5-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 227.0 21.1 280 235-579 8-287 (287)
No 1
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1177.69 Aligned_cols=817 Identities=87% Similarity=1.328 Sum_probs=725.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEE
Q ss_conf 93459999999999999995699999973569999999999999999999829999999983079934999599499985
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~np~~~vl~~aail~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g~~~~I~ 80 (885)
||||+.|+|+++++++++++..++.+.+|.+++.|+++++++..++++||+|+++++++|+++.+++++|+|||++++|+
T Consensus 65 ~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~ 144 (885)
T 3b8c_A 65 MWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQE 144 (885)
T ss_dssp CCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEE
T ss_conf 99999999999999999997045663018899999999999999999999999999999733499869999999899989
Q ss_pred CCCCCCCCEEEECCCCEEECEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHHH
Q ss_conf 77878896999828985403089984098599821445989753359998312231464080999999844200210176
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 160 (885)
Q Consensus 81 ~~~Lv~GDiI~i~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g~~~ 160 (885)
+++|+|||+|.+++||.|||||++++|++++||||+|||||.|+.|.+||.+|+||.+.+|++.++|++||.+|++||++
T Consensus 145 ~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 224 (885)
T 3b8c_A 145 AAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 224 (885)
T ss_dssp TTTTCTTSBCCCCSSCCCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCC
T ss_pred HHHCCCCCEEEECCCCEEEECEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHH
T ss_conf 89979897899889999930359997675400344468888645834898302675995117999999757301999999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 65312688880799999999999999999999999998630334258689999999998707703799999999999873
Q 002743 161 HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 240 (885)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l 240 (885)
+++++..+++++|+.+++++++++..+++++++.+++.|...+.+|..++..++++++++|||+||++++++++.++.+|
T Consensus 225 ~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ 304 (885)
T 3b8c_A 225 HLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304 (885)
T ss_dssp CSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99864644684999999999999999999999999999998068699999999999999703689999999999999999
Q ss_pred HCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
Q ss_conf 21792322670444203831886056788877912899873330045877499999999972576878289999975089
Q 002743 241 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLAD 320 (885)
Q Consensus 241 ~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~ 320 (885)
+++|+++|+++++|+||++++||||||||||+|+|+|.+..+..+..+++.++++.+++.++...++||++.|++.++.+
T Consensus 305 ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~ 384 (885)
T 3b8c_A 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLAD 384 (885)
T ss_dssp TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCC
T ss_pred HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
T ss_conf 71986968951888976799899879987616852799877751589999999999999972788999158999998646
Q ss_pred HHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
Q ss_conf 37773187167863477778617999994899689998294789997605995789999999999988089488998421
Q 002743 321 PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQE 400 (885)
Q Consensus 321 ~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~~a~~~ 400 (885)
+.+.+..++.++.+||+|.+|||+++++..+|+.+.++||||+.++++|..+.+.++.+.+.+++++.+|+|++++|++.
T Consensus 385 ~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~ 464 (885)
T 3b8c_A 385 PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQV 464 (885)
T ss_dssp TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBC
T ss_pred HHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 36576248322013578522568999980489689999488999997645864457999999999985798699999944
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 38878789999950667604589999246999999984899499995798289999999909998988885433753101
Q 002743 401 IPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 480 (885)
Q Consensus 401 ~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~ 480 (885)
+++.+.+..|++++++|+++++||||||++++|+.|+++||+++|+|||+..+|.++|+++||..+..+...+.|.+.+.
T Consensus 465 ~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~ 544 (885)
T 3b8c_A 465 VPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544 (885)
T ss_dssp CCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGT
T ss_pred CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
T ss_conf 66433111356757999999606661208999999997699689993998699999999809764667751445553122
Q ss_pred CCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCC
Q ss_conf 26810289997726839861820099999998556999999959958935541079238825610898731388871899
Q 002743 481 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 560 (885)
Q Consensus 481 ~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~ 560 (885)
.+++.++++.+++.++|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++||+||||++|+|+++++||+++.+++
T Consensus 545 ~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~ 624 (885)
T 3b8c_A 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 624 (885)
T ss_dssp TSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCS
T ss_pred CCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCC
T ss_conf 24635799998638689887899999999999977996999759812299998699759957712999984340133576
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40589999994999999999999999998999999999997420897579999999973000002346878999999921
Q 002743 561 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSW 640 (885)
Q Consensus 561 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~~~~l~~~~~~~~~~~~~~ 640 (885)
|+.++.++.+||++|+||++|+.|++++|+.+++.++...+.|+++++|++++|+++++|+.++++++|+..|+++|++|
T Consensus 625 ~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~ 704 (885)
T 3b8c_A 625 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSW 704 (885)
T ss_dssp HHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 66899999999999999999999999999999999999997038675889999999998777874046546754587303
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 18999999999999999999999999983044566447655677777899999999999999998456248887654614
Q 002743 641 KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 720 (885)
Q Consensus 641 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 720 (885)
..+.++..+++.|.++++.++.+|++++..++++..++.....++..+.++.+|++.++..++++|++|+++++++++|+
T Consensus 705 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~ 784 (885)
T 3b8c_A 705 KLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784 (885)
T ss_dssp TTTTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 58999999999999999999999999997376522357541102299999999999999999999976458887011864
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
Q ss_conf 99999999999999999884023322236411668999999999999999999987677427601356621022234555
Q 002743 721 LLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKK 800 (885)
Q Consensus 721 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~ 800 (885)
+++++++++..++.+++.+|.++.|..+.+++|.||+++|+++++++++.|+.|++.|+.+.+.+|+..++++.+++.++
T Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (885)
T 3b8c_A 785 ALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKK 864 (885)
T ss_dssp TTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCH
T ss_conf 99999999999999999986022103137760999999999999999999999999997620110766631331123511
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 58924779999998611
Q 002743 801 DYGKEEREAQWAAAQRT 817 (885)
Q Consensus 801 ~~~~~~~~~~~~~~~~~ 817 (885)
+|+++.|+++|+.+.+.
T Consensus 865 ~~~~~~~~~~~~~~~~~ 881 (885)
T 3b8c_A 865 DYGKEEREAQWMRGSHH 881 (885)
T ss_dssp -----------------
T ss_pred HCCCCCCCCCCCCCCCC
T ss_conf 10421233444444434
No 2
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1069.08 Aligned_cols=781 Identities=36% Similarity=0.596 Sum_probs=660.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEE
Q ss_conf 93459999999999999995699999973569999999999999999999829999999983079934999599499985
Q 002743 1 MWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQD 80 (885)
Q Consensus 1 ~~np~~~vl~~aail~~~~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g~~~~I~ 80 (885)
|++|+.++|+++++++++++ +|.+++.|++++++|.+++++||+++++++++|+++.+++++|+|||++++|+
T Consensus 120 f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~ 192 (920)
T 1mhs_A 120 FVGPIQFVMEGAAVLAAGLE-------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIE 192 (920)
T ss_dssp HHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEE
T ss_conf 98799999999999999997-------68999999999999999999999999999998633599879999899899989
Q ss_pred CCCCCCCCEEEECCCCEEECEEEEEEECC-EEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHH
Q ss_conf 77878896999828985403089984098-59982144598975335999831223146408099999984420021017
Q 002743 81 ASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKA 159 (885)
Q Consensus 81 ~~~Lv~GDiI~i~~Gd~IPaD~~ll~g~~-~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g~~ 159 (885)
+++|+|||+|.+++||.|||||++++|++ +.||||+|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|++|++
T Consensus 193 ~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 193 APEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRA 272 (920)
T ss_dssp TTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTT
T ss_pred HHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEECCCCEEECCCEEECCEEEEEEEEECCCCHHHHH
T ss_conf 89958897899677973366569994572232022224788864693479863037669513599999995776788899
Q ss_pred HHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 6653126-888807999999999999999999999999986303342586899999999987077037999999999998
Q 002743 160 AHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 238 (885)
Q Consensus 160 ~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~aL~~~~~i~~~~~~~ 238 (885)
+++++++ .+++++|+.+++++.+++..+++.+++.++ .+...+.++...+..++++++++|||+||++++++++.++.
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~-~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~ 351 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWV-SSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA 351 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 88776424677649999999999999999999999999-98846886999999999999876760377778999999999
Q ss_pred HHHCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCC--CHHHHHHHH
Q ss_conf 732179232267044420383188605678887791289987333004587749999999997257687--828999997
Q 002743 239 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQ--DAIDAAIVG 316 (885)
Q Consensus 239 ~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~--~~~~~al~~ 316 (885)
+|+++|+++|+++++|+||++++||||||||||+|+|+|.++.. ..++++++++..++.++..... ||++.|++.
T Consensus 352 ~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~ 428 (920)
T 1mhs_A 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLK 428 (920)
T ss_dssp HHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHH
T ss_pred HHHHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEE---CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 99868838705713555436768997788875555316999850---699898999999998547766689858999999
Q ss_pred HCCC---HHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCC----CHHHHHHHHHHHHHHHHC
Q ss_conf 5089---377731871678634777786179999948996899982947899976059----957899999999999880
Q 002743 317 MLAD---PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----REDVRKKVHAVIDKFAER 389 (885)
Q Consensus 317 ~~~~---~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~~~~~----~~~~~~~~~~~i~~~a~~ 389 (885)
++.+ .......++.++++||+|.+|+|+++++.++|+...++||||+.++++|.. +++.++.+.+.+++++.+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~ 508 (920)
T 1mhs_A 429 SLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATR 508 (920)
T ss_dssp HHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHCCCCHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99964631010135533578611677885999999679918999908799999861356789878899899999999867
Q ss_pred CCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 89488998421388787899999506676045899992469999999848994999957982899999999099989888
Q 002743 390 GLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 469 (885)
Q Consensus 390 Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~ 469 (885)
|+|++++|++. .|.+|+++|+++++|||||+++++|+.|+++||+++|+|||+..||.++|+++||..+.++
T Consensus 509 G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~ 580 (920)
T 1mhs_A 509 GFRSLGVARKR--------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN 580 (920)
T ss_dssp SCCCCEECCCS--------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCC
T ss_pred CCEEEEEEEEC--------CCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99799999832--------6653078899997343210179999998625744999838978999999998499965467
Q ss_pred CC--CCCCCCCCCCCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHH
Q ss_conf 85--4337531012681028999772683986182009999999855699999995995893554107923882561089
Q 002743 470 SS--SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDA 547 (885)
Q Consensus 470 ~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~ 547 (885)
.. .+.|. ..++++++.+.+++..+|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++||+||||++|+|+
T Consensus 581 ~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ 657 (920)
T 1mhs_A 581 AERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA 657 (920)
T ss_dssp SSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH
T ss_pred CCCEEECCC---CCCCHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCHH
T ss_conf 541242276---55898999987751819998379999999999996799699982881009999857867405643399
Q ss_pred HHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 87313888718994058999999499999999999999999899999999999742089757999999997300000234
Q 002743 548 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTIS 627 (885)
Q Consensus 548 a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~il~i~i~~~~~~~~l~ 627 (885)
++++||+++++++|++++.++.+||++|+||++++.|.++.|+............++++++|++++|+++++|++.++++
T Consensus 658 ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~ 737 (920)
T 1mhs_A 658 ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIA 737 (920)
T ss_dssp HHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCC
T ss_pred HHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99846807767977789999999999999999987889799999999999999999616879999999999877766513
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68789999999211899999999999999999999999998304456644765567777789999999999999999845
Q 002743 628 KDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFV 707 (885)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (885)
+|+..+.++|++|+.++++..+++.|.++++.++..|++.+..+ ...+. .....+.+|++|+++++++.+++|+
T Consensus 738 ~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~T~~f~~lv~~~~~~~~~ 811 (920)
T 1mhs_A 738 YDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQG---ENGGI---VQNFGNMDEVLFLQISLTENWLIFI 811 (920)
T ss_dssp CCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHHHHHTTTT---TTCCS---SSSSSSHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCC---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56764345887840898999999999999999999999999835---45653---3206678999999999999999998
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 62488876546149999999999999999988402332223641166899999999999999999998767742760135
Q 002743 708 TRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWD 787 (885)
Q Consensus 708 ~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 787 (885)
+|+.+++|...+++++++++++.+++.++++++. ++.+.+++|.+|+.+|+++++++++.|+.|++.++. ..|+
T Consensus 812 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~---~~fd 885 (920)
T 1mhs_A 812 TRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS---VGFD 885 (920)
T ss_dssp SSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC---CTTH
T ss_pred HCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
T ss_conf 5036054037559999999999999999999765---631678899999999999999999999999998604---8788
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 66210222345555892477999999861120
Q 002743 788 TLLENKTAFTTKKDYGKEEREAQWAAAQRTLH 819 (885)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (885)
+..+.+.+..+++....++ +..+.|+..
T Consensus 886 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 913 (920)
T 1mhs_A 886 NLMHGKSPKGNQKQRSLED----FVVSLQRVS 913 (920)
T ss_dssp HHHHHHSTTTHHHHHHHHH----HHHHHGGGH
T ss_pred HHHCCCCCCCCCCCCCCHH----HHHHHHHHH
T ss_conf 7755686543333332008----899878887
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=997.24 Aligned_cols=777 Identities=22% Similarity=0.365 Sum_probs=625.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHC-----CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 934599999999999999956-----999-99973569999999999999999999829999999983079934999599
Q 002743 1 MWNPLSWVMEAAAIMAIALAN-----GGG-RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG 74 (885)
Q Consensus 1 ~~np~~~vl~~aail~~~~~~-----~~~-~~~~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g 74 (885)
|+||+.++++++++++++++. +.. ...+|.+++.|+++++++++++++||+|+++++++|+++.+++++|+|||
T Consensus 101 ~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg 180 (1028)
T 2zxe_A 101 LFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDG 180 (1028)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 97089999999999999998751134566652007999898988889999999999999999999885278726999899
Q ss_pred EEEEEECCCCCCCCEEEECCCCEEECEEEEEEECCEEEEECCCCCCCCCCCCCCCC----------CCCCCCEEEECEEE
Q ss_conf 49998577878896999828985403089984098599821445989753359998----------31223146408099
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIE 144 (885)
Q Consensus 75 ~~~~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~aGs~v~~G~~~ 144 (885)
++++|++++|+|||+|.+++||.|||||+|++|++|+||||+|||||.|+.|.+++ .+|+||.+.+|.+.
T Consensus 181 ~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~ 260 (1028)
T 2zxe_A 181 EKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTAR 260 (1028)
T ss_dssp EEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEE
T ss_pred EEEEEEHHHCCCCCEEEECCCCEEECEEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEE
T ss_conf 99999888978677799899798412289996085899867567887634434677888844533548737469701699
Q ss_pred EEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 9999844200210176653126-888807999999999999999999999999986303342586899999999987077
Q 002743 145 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 223 (885)
Q Consensus 145 ~~V~~tG~~T~~g~~~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~ 223 (885)
++|++||.+|.+|++++++..+ .+++++|+.+++++.++....++..++.+++. ...+.+|...+..++++++++|||
T Consensus 261 ~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~i~llv~~iP~ 339 (1028)
T 2zxe_A 261 GVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYSWLEAVIFLIGIIVANVPE 339 (1028)
T ss_dssp EEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHSCT
T ss_pred EEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9999845143988999860378878892899999999999999999999999999-973676999999999999997474
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEE--CC-CC-----------C
Q ss_conf 0379999999999987321792322670444203831886056788877912899873330--04-58-----------7
Q 002743 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV--FA-KG-----------V 289 (885)
Q Consensus 224 aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~--~~-~~-----------~ 289 (885)
+||++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++.... +. .+ .
T Consensus 340 ~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1028)
T 2zxe_A 340 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKT 419 (1028)
T ss_dssp THHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCC
T ss_conf 17999999999999998558916444567664147629951688888877389999998984651367777655444667
Q ss_pred CH--HHHHHHHHHHCCC---------------CCCCHHHHHHHHHCC----CHHHHHCCCCEEEEECCCCCCCCEEEEEE
Q ss_conf 74--9999999997257---------------687828999997508----93777318716786347777861799999
Q 002743 290 EK--EHVILLAARASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYI 348 (885)
Q Consensus 290 ~~--~~~l~~a~~~~~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~ 348 (885)
+. ..++..++.|+.. ..+||.|.|++.++. +....+..++.++.+||+|.+|||+++++
T Consensus 420 ~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~ 499 (1028)
T 2zxe_A 420 SATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHE 499 (1028)
T ss_dssp CHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEE
T ss_conf 78999999999865787650477777664530078940999999999958988898874826787044766664799994
Q ss_pred CC---CCCEEEEECCCHHHHHHHCCC----------CHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC---------
Q ss_conf 48---996899982947899976059----------95789999999999988089488998421388787---------
Q 002743 349 DS---DGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------- 406 (885)
Q Consensus 349 ~~---~g~~~~~~KGa~~~il~~~~~----------~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~--------- 406 (885)
.. +|++.+++||||+.++++|.. +++.++.+.+.+++++.+|+|+|++|++.+++.++
T Consensus 500 ~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~ 579 (1028)
T 2zxe_A 500 NEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDAD 579 (1028)
T ss_dssp CSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTT
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHH
T ss_conf 05788871799993882899987456533897212888999999999999985599799999874682213420124624
Q ss_pred --CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC---------------
Q ss_conf --899999506676045899992469999999848994999957982899999999099989888---------------
Q 002743 407 --ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--------------- 469 (885)
Q Consensus 407 --~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~--------------- 469 (885)
+..|.+++|+|+++++|||||+++++|++|+++||+++|+|||+..+|.++|+++||..+...
T Consensus 580 ~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~ 659 (1028)
T 2zxe_A 580 EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQ 659 (1028)
T ss_dssp TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGG
T ss_pred HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH
T ss_conf 55555438099865115789984489999999986997999889977999999998698878833677777641863222
Q ss_pred -------CCCCCCCCCCCCCCCCHHHHHHHHCC--EEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEE
Q ss_conf -------85433753101268102899977268--398618200999999985569999999599589355410792388
Q 002743 470 -------SSSLLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 470 -------~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 540 (885)
..++.|.+. ..+..+++++.+.+.. +|+|++|+||..+|+.+|+.|++|+|+|||.||+|||++||+|||
T Consensus 660 ~~~~~~~~~vi~G~~l-~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIA 738 (1028)
T 2zxe_A 660 VNPRDAKACVVHGSDL-KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 738 (1028)
T ss_dssp SCGGGCCEEEEEHHHH-TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEE
T ss_pred CCCCCCCEEEEECHHH-HHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCEEE
T ss_conf 1555662699880885-647999999998627967999858889999999999689989998588533999986891199
Q ss_pred EC-CCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHH
Q ss_conf 25-6108987313888718994058999999499999999999999999899999999999-742089757999999997
Q 002743 541 VA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAIL 618 (885)
Q Consensus 541 i~-~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~il~i~i~ 618 (885)
|| +|+++++++||+++.+++|+++..++.+||++|+|+++++.|.+++|+..++.++.+. +..+.+++|+|++|++++
T Consensus 739 mg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~ 818 (1028)
T 2zxe_A 739 MGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLG 818 (1028)
T ss_dssp ESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTT
T ss_pred ECCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 67765888998548995579877999999999999999999999999999999999999999766644579999999999
Q ss_pred HHCC-CCCCCCCCCCCC---CCCCCC-----CHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HCCCCCC-------C---
Q ss_conf 3000-002346878999---999921-----18999999-999999999999999999983-0445664-------4---
Q 002743 619 NDGT-IMTISKDRVKPS---PQPDSW-----KLKEIFAT-GVVLGSYLAIMTVVFFWLMRK-TDFFSDA-------F--- 677 (885)
Q Consensus 619 ~~~~-~~~l~~~~~~~~---~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~~-------~--- 677 (885)
+|++ .+++++|++.+. ++|+++ ..++.+.. .+..|+++++.+++.|++.+. .++.+.. +
T Consensus 819 ~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 898 (1028)
T 2zxe_A 819 TDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDR 898 (1028)
T ss_dssp TTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCT
T ss_pred HHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCC
T ss_conf 99999998602866145651599995213452799999999999999999999999998740676620131022001035
Q ss_pred CCCCC----CC---------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 76556----77---------777899999999999999998456248887654--6149999999999999999988402
Q 002743 678 GVRSL----RT---------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIE--RPGLLLATAFVIAQLVATFIAVYAN 742 (885)
Q Consensus 678 ~~~~~----~~---------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~ 742 (885)
+.... .. ...+.+|++|.++++++.++.|++|+++.+++. .+++++++++++..++..++ +|.+
T Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p 977 (1028)
T 2zxe_A 899 WISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCP 977 (1028)
T ss_dssp TCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHST
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 654211345532223444456667889999999999999999874687511015776889999999999999999-9865
Q ss_pred --CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --33222364116689999999999999999999876774
Q 002743 743 --WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780 (885)
Q Consensus 743 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 780 (885)
..++.+.+++|.+|++++.++++.++..++.|++.|++
T Consensus 978 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 978 GTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp THHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 6776421888999999999999999999999999998706
No 4
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=992.56 Aligned_cols=777 Identities=23% Similarity=0.370 Sum_probs=623.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHC---CCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 934599999999999999956---9999---9973569999999999999999999829999999983079934999599
Q 002743 1 MWNPLSWVMEAAAIMAIALAN---GGGR---DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG 74 (885)
Q Consensus 1 ~~np~~~vl~~aail~~~~~~---~~~~---~~~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g 74 (885)
|+||+.++++++++++++... ..++ ..+|.+++.|++++++|++++++||+|+++++++|+++.+++++|+|||
T Consensus 106 ~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG 185 (1034)
T 3ixz_A 106 LAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDG 185 (1034)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 84738999999999999999874034777654420564243013227999999999999999999762489735999999
Q ss_pred EEEEEECCCCCCCCEEEECCCCEEECEEEEEEECCEEEEECCCCCCCCCCCCCCC----------CCCCCCCEEEECEEE
Q ss_conf 4999857787889699982898540308998409859982144598975335999----------831223146408099
Q 002743 75 RWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIE 144 (885)
Q Consensus 75 ~~~~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g----------~~v~aGs~v~~G~~~ 144 (885)
++++|++++|||||+|.+++||.||||+++++|+++.||||+|||||.|+.|.++ |.+|+||.+.+|.+.
T Consensus 186 ~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~ 265 (1034)
T 3ixz_A 186 DKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQ 265 (1034)
T ss_pred EEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCE
T ss_conf 89998889879885899857964358769997088058833667887776655777665632344512204069860424
Q ss_pred EEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 9999844200210176653126-888807999999999999999999999999986303342586899999999987077
Q 002743 145 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 223 (885)
Q Consensus 145 ~~V~~tG~~T~~g~~~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~ 223 (885)
++|++||.+|.+||+++++... .+++++|+.+++++.++...+++..++ +++.+...+.++...+..++++++++|||
T Consensus 266 ~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iPe 344 (1034)
T 3ixz_A 266 GLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGAT-FFIVAMCIGYTFLRAMVFFMAIVVAYVPE 344 (1034)
T ss_pred EEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHEECC
T ss_conf 99996025437408998620356678918999999999999999999999-99999996412999999999998820266
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCC--------------
Q ss_conf 037999999999998732179232267044420383188605678887791289987333004587--------------
Q 002743 224 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV-------------- 289 (885)
Q Consensus 224 aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~-------------- 289 (885)
+||++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++........
T Consensus 345 ~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1034)
T 3ixz_A 345 GLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQS 424 (1034)
T ss_pred CCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 50899999999999987338828647678886158729972897872368379999997795122567666566556767
Q ss_pred --CHHHHHHHHHHHCCC---------------CCCCHHHHHHHHHCC----CHHHHHCCCCEEEEECCCCCCCCEEEEEE
Q ss_conf --749999999997257---------------687828999997508----93777318716786347777861799999
Q 002743 290 --EKEHVILLAARASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYI 348 (885)
Q Consensus 290 --~~~~~l~~a~~~~~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~ 348 (885)
....++..++.|+.. ..+||.+.|++.++. +....+..++.++.+||+|.+|+|++++.
T Consensus 425 ~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~ 504 (1034)
T 3ixz_A 425 SETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHT 504 (1034)
T ss_pred CHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEE
T ss_conf 78999999998871626653576777665743554925999999999857886888974860699503577726899998
Q ss_pred CC---CCCEEEEECCCHHHHHHHCCC----------CHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC---------
Q ss_conf 48---996899982947899976059----------95789999999999988089488998421388787---------
Q 002743 349 DS---DGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------- 406 (885)
Q Consensus 349 ~~---~g~~~~~~KGa~~~il~~~~~----------~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~--------- 406 (885)
.. ++++.+++|||||.++++|.. +++.++.+.+..++++.+|+|+|++|++.+++.+.
T Consensus 505 ~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~ 584 (1034)
T 3ixz_A 505 LEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVE 584 (1034)
T ss_pred ECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHH
T ss_conf 33788860899996884999997377552896401999999999999999871475823686785580004321124534
Q ss_pred --CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC---------------
Q ss_conf --899999506676045899992469999999848994999957982899999999099989888---------------
Q 002743 407 --ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--------------- 469 (885)
Q Consensus 407 --~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~--------------- 469 (885)
+..|++++|+|+++++||||++++++|++|+++||+++|+|||+..+|.++|+++|+..+...
T Consensus 585 ~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~ 664 (1034)
T 3ixz_A 585 AMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQ 664 (1034)
T ss_pred HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 43022248679888713688706599999999986996999969977999999998699988724788888761765000
Q ss_pred -------CCCCCCCCCCCCCCCCHHHHHHHHCC--EEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEE
Q ss_conf -------85433753101268102899977268--398618200999999985569999999599589355410792388
Q 002743 470 -------SSSLLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 540 (885)
Q Consensus 470 -------~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIa 540 (885)
...+.+.+ ...++.+++.+.+.+.. +|+|++|+||.++|+.+|+.|++|+|+|||.||+|||+.||+|||
T Consensus 665 ~~~~~~~~~~~~g~~-l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIA 743 (1034)
T 3ixz_A 665 VNRKDARACVINGMQ-LKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVA 743 (1034)
T ss_pred CCCCCCCEEEEECHH-HHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEE
T ss_conf 254454316771676-6638999999998737826999669899999999999769999998795776999997893298
Q ss_pred EC-CCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHHHHHHH
Q ss_conf 25-6108987313888718994058999999499999999999999999899999999999-742089757999999997
Q 002743 541 VA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAIL 618 (885)
Q Consensus 541 i~-~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~il~i~i~ 618 (885)
|| +|++.+|++||+++.++++++++.++++||++|+|+++++.|.+++|+..++..+++. +.++.|++|+|++|++++
T Consensus 744 Mg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~ 823 (1034)
T 3ixz_A 744 MGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELC 823 (1034)
T ss_pred ECCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 07756799998549996668833999999998899999999999999999999999999999821466899999999999
Q ss_pred HHCC-CCCCCCCCCCCC-----CC-CCC--CCHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HCCCCCC-CCCC------
Q ss_conf 3000-002346878999-----99-992--1189999999-99999999999999999983-0445664-4765------
Q 002743 619 NDGT-IMTISKDRVKPS-----PQ-PDS--WKLKEIFATG-VVLGSYLAIMTVVFFWLMRK-TDFFSDA-FGVR------ 680 (885)
Q Consensus 619 ~~~~-~~~l~~~~~~~~-----~~-~~~--~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~-~~~~~~~-~~~~------ 680 (885)
+|++ .+++++|++.+. |+ |.+ ...+.++... ...|+++++.+++.|++.+. .++.+.. ++..
T Consensus 824 ~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 903 (1034)
T 3ixz_A 824 TDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENH 903 (1034)
T ss_pred HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 88888888516889732664799897534455788999999999999999999999999963677620000111222334
Q ss_pred ---CCCC-------------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---5677-------------777899999999999999998456248887654---614999999999999999998840
Q 002743 681 ---SLRT-------------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYA 741 (885)
Q Consensus 681 ---~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~ 741 (885)
...+ .....+|+.|.++++++.++.|+.|+++.+.+. ..++|+++++++..++..++ .|.
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~ 982 (1034)
T 3ixz_A 904 HLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFL-CYC 982 (1034)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHH
T ss_conf 4443101112111011100000257989999999999999983126887654267753689999999999999999-982
Q ss_pred C--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2--33222364116689999999999999999999876774
Q 002743 742 N--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 780 (885)
Q Consensus 742 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 780 (885)
+ ..++.+.+++|.+|+++++++++.++++|+.|++.|++
T Consensus 983 p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 983 PGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 66777756788989999999999999999999999999747
No 5
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=973.49 Aligned_cols=779 Identities=27% Similarity=0.352 Sum_probs=613.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCE--
Q ss_conf 93459999999999999995699---9999735699999999999999999998299999999830799349995994--
Q 002743 1 MWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-- 75 (885)
Q Consensus 1 ~~np~~~vl~~aail~~~~~~~~---~~~~~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g~-- 75 (885)
|++|+.++++++++++++++... +...+|.+++.|++++++++.+++++|+|+++++++|+++.+++++|+|||+
T Consensus 58 f~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~ 137 (995)
T 3ar4_A 58 FEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKS 137 (995)
T ss_dssp GCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCE
T ss_conf 98899999999999999988602566540347876886678899999999999999999999871089738999379864
Q ss_pred EEEEECCCCCCCCEEEECCCCEEECEEEEEE--ECCEEEEECCCCCCCCCCCCCCC-------------CCCCCCCEEEE
Q ss_conf 9998577878896999828985403089984--09859982144598975335999-------------83122314640
Q 002743 76 WSEQDASILVPGDVISIKLGDIVPADARLLE--GDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 140 (885)
Q Consensus 76 ~~~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~--g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~aGs~v~~ 140 (885)
.++|++++|+|||+|.+++||.|||||++++ +++|+||||+|||||+|+.|+++ |.+|+||.+.+
T Consensus 138 ~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~ 217 (995)
T 3ar4_A 138 VQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAA 217 (995)
T ss_dssp CEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEE
T ss_pred EEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEEC
T ss_conf 79978999877878998897843544899988504399982524688763340045667766675554546761878984
Q ss_pred CEEEEEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHH----HHH
Q ss_conf 80999999844200210176653126-888807999999999999999999999999986303-----34258----689
Q 002743 141 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ-----HRKYR----DGI 210 (885)
Q Consensus 141 G~~~~~V~~tG~~T~~g~~~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~----~~~ 210 (885)
|.+.++|++||.+|++||++++++.+ .+++++|+.+++++.++...+++..++.+++.+..+ +.+|. ..+
T Consensus 218 G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (995)
T 3ar4_A 218 GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYF 297 (995)
T ss_dssp CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHH
T ss_pred CEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 45899999767221989999973257878993899999999999999999999999999987414334640799999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEC--C--
Q ss_conf 999999998707703799999999999873217923226704442038318860567888779128998733300--4--
Q 002743 211 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-- 286 (885)
Q Consensus 211 ~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--~-- 286 (885)
..++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++..... .
T Consensus 298 ~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 377 (995)
T 3ar4_A 298 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDF 377 (995)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCC
T ss_conf 99999999866760489999999999998441784861341555503833997658887665856999998347556765
Q ss_pred ----------CCCC----------------H---HHHHHHHHHHCCCC------------CCCHHHHHHHHHCCCH----
Q ss_conf ----------5877----------------4---99999999972576------------8782899999750893----
Q 002743 287 ----------KGVE----------------K---EHVILLAARASRTE------------NQDAIDAAIVGMLADP---- 321 (885)
Q Consensus 287 ----------~~~~----------------~---~~~l~~a~~~~~~~------------~~~~~~~al~~~~~~~---- 321 (885)
..+. . ..+...++.|+... .+||.|.|++.++.+.
T Consensus 378 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~ 457 (995)
T 3ar4_A 378 CSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFN 457 (995)
T ss_dssp EEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTC
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 54302540477768863101366434444558999999999874888056568898325547964799999999839964
Q ss_pred ---H-------------HHHCCCCEEEEECCCCCCCCEEEEEECCCC-----CEEEEECCCHHHHHHHCCC---------
Q ss_conf ---7-------------773187167863477778617999994899-----6899982947899976059---------
Q 002743 322 ---K-------------EARAGVREVHFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC--------- 371 (885)
Q Consensus 322 ---~-------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~~~il~~~~~--------- 371 (885)
. ..+..++.++.+||+|.+|||+++++.++| +...++||||+.|+++|..
T Consensus 458 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 537 (995)
T 3ar4_A 458 TEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVP 537 (995)
T ss_dssp CCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCC
T ss_conf 10001342010121015566417457774048888756999834898766644499975887999985405442897324
Q ss_pred -CHHHHHHHHHHHHHH--HHCCCEEEEEEEEECCCCC----------CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf -957899999999999--8808948899842138878----------789999950667604589999246999999984
Q 002743 372 -REDVRKKVHAVIDKF--AERGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 438 (885)
Q Consensus 372 -~~~~~~~~~~~i~~~--a~~Glr~l~~a~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~ 438 (885)
+++.++++.+.++++ +.+|+|+|++||+.++..+ ++..|++++++|+++++||+||+++++|+.|++
T Consensus 538 l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~ 617 (995)
T 3ar4_A 538 MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRD 617 (995)
T ss_dssp CCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 99999999999999877630561488999983476511122234024455306948999985258896669999999998
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCC
Q ss_conf 8994999957982899999999099989888--85433753101268102899977268398618200999999985569
Q 002743 439 LGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERK 516 (885)
Q Consensus 439 ~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g 516 (885)
+||+++|+|||+..+|.++|+++|+...... ...+.|.+. ..++.+++.+.+.+..+|+|++|+||.++|+.+|++|
T Consensus 618 ~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~-~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g 696 (995)
T 3ar4_A 618 AGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYD 696 (995)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHH-HTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECHHH-HHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCC
T ss_conf 699899989997899999999839677887535348983664-6289999999875373899708999999999999779
Q ss_pred CEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999959958935541079238825610898731388871899405899999949999999999999999989999999
Q 002743 517 HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 596 (885)
Q Consensus 517 ~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~~i~~~~~~ 596 (885)
+.|+|+|||.||+|||++||+|||||+|+++++++||+++.+++|..++.++.+||++|+|+++++.|.+++|+..++..
T Consensus 697 ~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~ 776 (995)
T 3ar4_A 697 EITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCI 776 (995)
T ss_dssp CCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97999838814499998789679967889999973889977787789999999989999999999999999999999999
Q ss_pred HHHH-HHHCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCCC-----CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999-7420897579999999973000-002346878999-----99--9921189999999999999999999999999
Q 002743 597 MLIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQ--PDSWKLKEIFATGVVLGSYLAIMTVVFFWLM 667 (885)
Q Consensus 597 ~~~~-~~~~~~~~~~~il~i~i~~~~~-~~~l~~~~~~~~-----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 667 (885)
+++. +.++.+++|+|++|+|+++|++ +++++.+++.+. |+ .++...+..+...+..|++++++++..|++.
T Consensus 777 ~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~ 856 (995)
T 3ar4_A 777 FLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWW 856 (995)
T ss_dssp HHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999847625789999999999988777763067777568737999976454489999999999999999999999999
Q ss_pred HH--HCCC-----CC-CCCCC-----CC----CC--CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--C-CHHHHHHH
Q ss_conf 83--0445-----66-44765-----56----77--77789999999999999999845624888765--4-61499999
Q 002743 668 RK--TDFF-----SD-AFGVR-----SL----RT--RPDEMMAALYLQVSIISQALIFVTRSRSWSFI--E-RPGLLLAT 725 (885)
Q Consensus 668 ~~--~~~~-----~~-~~~~~-----~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~-~~~~~l~~ 725 (885)
+. .+.. .. .++.. .. .. .....+|+.|..+++++.++.|++|+...+++ . ..++++++
T Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~ 936 (995)
T 3ar4_A 857 FMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLG 936 (995)
T ss_dssp TSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHH
T ss_pred HHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHH
T ss_conf 98515665433000001122344433334332210010135659999999999999998602554310057754799999
Q ss_pred HHHHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999988402--332223641166899999999999999999998767742
Q 002743 726 AFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYIL 781 (885)
Q Consensus 726 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~ 781 (885)
++++..++..++ +|.+ ..++.+.+++|..|+.+++++++++++.++.|++.|.++
T Consensus 937 ~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 937 SICLSMSLHFLI-LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp HHHHHHHHHHHH-HHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999-988877776115789999999999999999999999999941178
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=725.56 Aligned_cols=523 Identities=23% Similarity=0.347 Sum_probs=454.2
Q ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE-CCEEEEEECCCCCCCCEEEECCCCEEECEEEE
Q ss_conf 97356-99999999999999999998299999999830799349995-99499985778788969998289854030899
Q 002743 27 PDWQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARL 104 (885)
Q Consensus 27 ~~~~~-~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r-~g~~~~I~~~~Lv~GDiI~i~~Gd~IPaD~~l 104 (885)
..|.+ +..|+++++++.+++.+.++|+.+++++|++..+++++++| ||++++|++++|+|||+|.|++||.|||||++
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEE
T ss_conf 30899999999999999999999999999999998833998899995299899987766898988998799751563799
Q ss_pred EEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHH
Q ss_conf 84098599821445989753359998312231464080999999844200210176653126-88880799999999999
Q 002743 105 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFC 183 (885)
Q Consensus 105 l~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g~~~~l~~~~-~~~~~~~~~~~~i~~~~ 183 (885)
++| .+.||||+|||||.|+.|++|+.+|+||.+.+|.+.++|++||.+|.++|+.++++++ .+++++|+.+++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-CEEEEECCCCCCCCCEEECCCCCCCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 978-6676512357861427831688677864861450999999841225999999999974326897999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCEEE
Q ss_conf 99999999999999863033-42586899999999987077037999999999998732179232267044420383188
Q 002743 184 ICSIAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 262 (885)
Q Consensus 184 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~I 262 (885)
+..+++..++.+++++.... ..+..++..++++++.+|||+|++++|+++..+..+++++|+++|+++++|+||++++|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCEE
T ss_conf 99999999999999999678732999999987748773242788889999999999975151332337899986279999
Q ss_pred EECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 60567888779128998733300458774999999999725768782899999750893777318716786347777861
Q 002743 263 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKR 342 (885)
Q Consensus 263 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr 342 (885)
|||||||||+|+|+|.++. ..+.+.++++.+++..+...+ ||++.|+++++.+ .++......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~-----~~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSE-HPLANAIVHAAKE-----KGLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHT-----TCCCCCCCSCCCCCTTT
T ss_pred EEECCCCCCCCCEEEEEEE----ECCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHH-----CCCCCCCCCCCCCCCCC
T ss_conf 9818988758952799998----348877899999999862289-9289999999996-----59986675432024886
Q ss_pred EEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCC
Q ss_conf 79999948996899982947899976059957899999999999880894889984213887878999995066760458
Q 002743 343 TALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLF 422 (885)
Q Consensus 343 ~sv~~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~ 422 (885)
.... ..+|+ .+.+|+++.+.+..... +...+..++++.+|+|+++++++. +++|+++++
T Consensus 494 gv~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred EEEE--EECCE--EEEECCHHHHHHCCCCH----HHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEEE
T ss_conf 5899--99998--99973899998739971----678999999985698699998799-------------899999850
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECH
Q ss_conf 99992469999999848994999957982899999999099989888854337531012681028999772683986182
Q 002743 423 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 502 (885)
Q Consensus 423 D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P 502 (885)
|++|++++++|+.|+++|++++|+|||+..++..+++++|+. .++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC------------------------------EEEEECCH
T ss_conf 322030999999999879949998798989999999985998------------------------------79970699
Q ss_pred HCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00999999985569999999599589355410792388256108987313888718994058999999499999999999
Q 002743 503 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 582 (885)
Q Consensus 503 ~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i 582 (885)
++|.++|+.+|++++.|+|+|||.||+|||+.||+|||||+|+|.++++||+++.++++..+..++++||++++|+++|+
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999669989999898576999986997799478659999769999926987899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCCCHHH
Q ss_conf 99999989999999999974-208975799
Q 002743 583 IYAVSITIRIVLGFMLIALI-WKFDFSPFM 611 (885)
Q Consensus 583 ~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~ 611 (885)
.|++.+|+..++...+..+. +++.++|+.
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~ 712 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMI 712 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 999999999999999878775043132999
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=716.08 Aligned_cols=522 Identities=24% Similarity=0.359 Sum_probs=444.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCEEECEEEEEEE
Q ss_conf 73569999999999999999999829999999983079934999599499985778788969998289854030899840
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 107 (885)
Q Consensus 28 ~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g~~~~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~g 107 (885)
+|..+..++++++++..++.+.++|+++++.++++..+++++|+|||++++|++++|+|||+|.+++||.|||||++++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 99999999999999999999999999999988872699756999899899989899799989998899988567999977
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHH
Q ss_conf 98599821445989753359998312231464080999999844200210176653126-88880799999999999999
Q 002743 108 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 108 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g~~~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 186 (885)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.++++.++++++ .+++++|+.++++..+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CEEEECCCCCCCCCCEEECCCCEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf -7688600013887646636898230416970672999999846743999999999975346983899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCEEEEECC
Q ss_conf 99999999999863033425868999999999870770379999999999987321792322670444203831886056
Q 002743 187 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 266 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DK 266 (885)
+++..++.++.++...+.++..++..++++++.+|||+|++++++++..+..+++++|+++|+++++|+||+++++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEEECC
T ss_conf 99999999999998568869999999999997502678999999999999999998893894828998762498999847
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCCEEEE
Q ss_conf 78887791289987333004587749999999997257687828999997508937773187167863477778617999
Q 002743 267 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 346 (885)
Q Consensus 267 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 346 (885)
|||||+|+|+|.++.. .+.+.++++.+++.++...+ ||++.|++.++.+.. +...+..+|.....+....
T Consensus 412 TGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~-----~~~~~~~~~~~~~g~g~~~ 481 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA 481 (723)
T ss_dssp HHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE
T ss_pred CCCCCCCCEEEEEEEE----CCCCHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHCC-----CCCCCCCCEEEECCCCEEE
T ss_conf 7755269627999980----79998999999999850499-954289999998549-----9857864459966981699
Q ss_pred EECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99489968999829478999760599578999999999998808948899842138878789999950667604589999
Q 002743 347 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 426 (885)
Q Consensus 347 ~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr 426 (885)
..+.+|+++.+.+... ...+...+..++++.+|+|+++++++. +++|+++++|++|
T Consensus 482 --------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 482 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred --------EEEEECCHHHHHHCCC---CCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEECCCCC
T ss_conf --------9999778999975499---860899999999985598289997899-------------9999996068752
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHHCHH
Q ss_conf 24699999998489949999579828999999990999898888543375310126810289997726839861820099
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 506 (885)
Q Consensus 427 ~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~ 506 (885)
|+++++|+.|+++|++++|+|||+..++..+++++|+. .++++++|+||.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC------------------------------EEECCCCHHHHH
T ss_conf 56999999999779979999998989999999985993------------------------------899268999999
Q ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999855699999995995893554107923882561089873138887189940589999994999999999999999
Q 002743 507 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 586 (885)
Q Consensus 507 ~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 586 (885)
++|+.+|+. +.|+|+|||.||+|||+.||+|||||+|+|.++++||+++.++++..+..++.+||++|+++++++.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998349-9399998982309999549987996787599998699999679988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHCCCCCHHHHHHH
Q ss_conf 99899999999999-742089757999999
Q 002743 587 SITIRIVLGFMLIA-LIWKFDFSPFMVLII 615 (885)
Q Consensus 587 ~~~i~~~~~~~~~~-~~~~~~~~~~~il~i 615 (885)
++|+..++..+... .+|++.++|+.-.+.
T Consensus 667 ~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~ 696 (723)
T 3j09_A 667 IYNVILIPAAAGLLYPIFGVVFRPEFAGLA 696 (723)
T ss_dssp HHHHHHHHHHHHTTSSCCCCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 999999999997565401551488999999
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=709.19 Aligned_cols=521 Identities=24% Similarity=0.365 Sum_probs=443.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCEEEECCCCEEECEEEEEEE
Q ss_conf 73569999999999999999999829999999983079934999599499985778788969998289854030899840
Q 002743 28 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 107 (885)
Q Consensus 28 ~~~~~~~i~~~l~~~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~r~g~~~~I~~~~Lv~GDiI~i~~Gd~IPaD~~ll~g 107 (885)
+|..+..++++++++..++.+.++|++++++++++..+++++|+|||++++|++++|+|||+|.+++||.|||||++++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 99999999999999999999999999999999861799979999999799988999798999998899988668999988
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHH
Q ss_conf 98599821445989753359998312231464080999999844200210176653126-88880799999999999999
Q 002743 108 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 186 (885)
Q Consensus 108 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~g~~~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 186 (885)
.+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.++++.++++++ .+++++|+.++++..+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -CEEEECCCCCCCCCCEECCCCCEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf -6899802246998765608999741667982572999999727745999999999973146985899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCEEEEECC
Q ss_conf 99999999999863033425868999999999870770379999999999987321792322670444203831886056
Q 002743 187 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 266 (885)
Q Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~aL~~~~~i~~~~~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DK 266 (885)
+++..++.++.++...+.++..++..++++++.+|||+|++++|+++..+..+++++|+++|+++++|+||+++++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECC
T ss_conf 99999999999999569869999999999999873668999999999999999997793766816999862799999868
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCCEEEE
Q ss_conf 78887791289987333004587749999999997257687828999997508937773187167863477778617999
Q 002743 267 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 346 (885)
Q Consensus 267 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 346 (885)
|||||+|+|+|.++.. .+.+.++++.+++.++...+ ||++.|++.++.+. +++..+..+|....++....
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~-----g~~~~~~~~~~~~~g~g~~~ 403 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEH-----GIELGEPEKVEVIAGEGVVA 403 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTEEEE
T ss_pred CCCCCCCCEEEEEEEE----CCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHC-----CCCCCCCCCEEEECCCCEEE
T ss_conf 6665589707999981----79997999999999751588-74679999999965-----99867865359965884699
Q ss_pred EECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99489968999829478999760599578999999999998808948899842138878789999950667604589999
Q 002743 347 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 426 (885)
Q Consensus 347 ~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr 426 (885)
..+.+|+++.+.+... ...+...+..++++.+|+|+++++++. +++|+++++|++|
T Consensus 404 --------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 404 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred --------EEEEECCHHHHHHCCC---CCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEECCCCH
T ss_conf --------9999887999975498---751889999999985598389998899-------------9999999348765
Q ss_pred CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECHHCHH
Q ss_conf 24699999998489949999579828999999990999898888543375310126810289997726839861820099
Q 002743 427 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 506 (885)
Q Consensus 427 ~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~ 506 (885)
|+++++|+.|+++|++++|+|||+..++..+++++|+. .+|++++|++|.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCC------------------------------EEEEECCHHHHH
T ss_conf 67999999999779979999088879999999983997------------------------------899837877689
Q ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999855699999995995893554107923882561089873138887189940589999994999999999999999
Q 002743 507 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 586 (885)
Q Consensus 507 ~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 586 (885)
+.++.+|+. +.|+|+|||.||+||++.||+|||||+|++.++++||+++.++++..+..++++||++++++++++.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998609-9599996977689999759988994887599998699999369988999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHCCCCCHHHHHH
Q ss_conf 9989999999999-974208975799999
Q 002743 587 SITIRIVLGFMLI-ALIWKFDFSPFMVLI 614 (885)
Q Consensus 587 ~~~i~~~~~~~~~-~~~~~~~~~~~~il~ 614 (885)
++|+..++..+.. ..+|++.++|+.-.+
T Consensus 589 ~~N~~~i~la~~~~~~~~g~~l~p~~a~~ 617 (645)
T 3j08_A 589 IYNVILIPAAAGLLYPIFGVVFRPEFAGL 617 (645)
T ss_dssp HHHHHHHHHHTTTTTTTCCCSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999999999867651035338999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=268.18 Aligned_cols=259 Identities=21% Similarity=0.310 Sum_probs=200.0
Q ss_pred HHHHHHCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 99873217923226704442038318860567888779128998733300458774999999999725768782899999
Q 002743 236 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 315 (885)
Q Consensus 236 ~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~ 315 (885)
+..+++++|+++|+..++|.|+++++||||||||||+|+|.+.++. +.++++.+++..+..+ .||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s-~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALS-SHPIAKAIV 75 (263)
Q ss_pred HHCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 75089377731871678634777786179999948996899982947899976059957899999999999880894889
Q 002743 316 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 395 (885)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l~ 395 (885)
.++..........+....++-.+.+. .+ ++ ..+..|.++ ++.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~~~----~~---~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGVRG----KI---SD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Q ss_pred EEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 98421388787899999506676045899992469999999848994999957982899999999099989888854337
Q 002743 396 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 475 (885)
Q Consensus 396 ~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~~ 475 (885)
++++. .+.|.+.+.|+++|++.++++.|++.|+++.|+|||+...+..+++++|+..
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------- 177 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------- 177 (263)
Q ss_pred CCCCCCCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCEE
Q ss_conf 53101268102899977268398618200999999985569999999599589355410792388256108987313888
Q 002743 476 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 555 (885)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDiv 555 (885)
.|..+.|++|...++.++..++.|+|+|||.||++|++.|++|++++++++.+++.+|++
T Consensus 178 --------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 178 --------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 71899405899999949999999999
Q 002743 556 LTEPGLSVIISAVLTSRAIFQRMKNY 581 (885)
Q Consensus 556 l~~~~~~~i~~~i~~gR~~~~~i~~~ 581 (885)
+..+++..+..++..+|+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=226.96 Aligned_cols=280 Identities=28% Similarity=0.414 Sum_probs=218.4
Q ss_pred HHHHHHHCCCCEECCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 99987321792322670444203831886056788877912899873330045877499999999972576878289999
Q 002743 235 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAI 314 (885)
Q Consensus 235 ~~~~~l~~~~i~vk~~~~lE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al 314 (885)
-|+.+++++|+++|+++++|.+++++.+|||||||||.+.+.+.++.. . .+ +.++++.+++..+... .||++.++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s-~hp~~~a~ 82 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRS-EHPIAEAI 82 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTC-CSHHHHHH
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEE--C-CC-CHHHHHHHHHHHHHCC-CCHHHHHH
T ss_conf 157899879979968089988536999999689988289779999981--7-99-9999999999975217-99799999
Q ss_pred HHHCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 97508937773187167863477778617999994899689998294789997605995789999999999988089488
Q 002743 315 VGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL 394 (885)
Q Consensus 315 ~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~~~il~~~~~~~~~~~~~~~~i~~~a~~Glr~l 394 (885)
..++..........+....++ .+.. . . ..+.+|.++.+.+.... ..+.+....+.+..+|.+++
T Consensus 83 ~~~~~~~g~~~~~~~~~~~~~-----G~~~-~--~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i 146 (287)
T 3a1c_A 83 VKKALEHGIELGEPEKVEVIA-----GEGV-V--A-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAV 146 (287)
T ss_dssp HHHHHHTTCCCCCCSCEEEET-----TTEE-E--E-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCCCCCCCCEEEC-----CCCE-E--E-----EEEEECCHHHHHHCCCC---CCHHHHHHHHHHHHCCCEEE
T ss_conf 999986599855554414624-----8872-8--8-----99998899999865997---50778999999874797599
Q ss_pred EEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99842138878789999950667604589999246999999984899499995798289999999909998988885433
Q 002743 395 GVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 474 (885)
Q Consensus 395 ~~a~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~~GI~v~mlTGD~~~ta~~ia~~lgl~~~~~~~~~~~ 474 (885)
++++.. .+.+.+...++++|++.++++.|+++|+++.++||+....+..+.+.+|+..
T Consensus 147 ~~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------- 204 (287)
T 3a1c_A 147 IVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------- 204 (287)
T ss_dssp EEEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------
T ss_pred EEEECC-------------EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE---------
T ss_conf 999999-------------8999999545361418999999997798599990989899999999809813---------
Q ss_pred CCCCCCCCCCCHHHHHHHHCCEEEEECHHCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCHHHHHHCCCE
Q ss_conf 75310126810289997726839861820099999998556999999959958935541079238825610898731388
Q 002743 475 GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 554 (885)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~i~~~~~P~~K~~iV~~l~~~g~~v~~iGDG~ND~~al~~AdvGIai~~~~~~a~~aaDi 554 (885)
.|..+.|..|...++.++.. +.|+|+||+.||++|.+.|+++++++++.+..+..+|+
T Consensus 205 ---------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~ 262 (287)
T 3a1c_A 205 ---------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDI 262 (287)
T ss_dssp ---------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSE
T ss_pred ---------------------EEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCE
T ss_conf ---------------------11005817799999998258-83999979777899999789529967887788962999
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8718994058999999499999999
Q 002743 555 VLTEPGLSVIISAVLTSRAIFQRMK 579 (885)
Q Consensus 555 vl~~~~~~~i~~~i~~gR~~~~~i~ 579 (885)
++.++++..+..++..+|.++++|+
T Consensus 263 v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 263 VLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp EESSSCTHHHHHHHHTTC-------
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9947998999999999999998509
Done!